BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042609
(540 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255547442|ref|XP_002514778.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545829|gb|EEF47332.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/578 (59%), Positives = 412/578 (71%), Gaps = 47/578 (8%)
Query: 1 MWRSIAAGSRLVARNFGVATEK------------VHCSQTLSL--NISRSLSKPSLYRSS 46
MWRSIA SR A + AT V C Q L N+S + + + SS
Sbjct: 1 MWRSIAIKSRQAAHSLSAATSYNKVSSASHFSNWVPCQQNLRFLSNLSVNTNDTEIDHSS 60
Query: 47 RFLSESPAANPKDES--------SFSPETDFSSRSF---GENEYAQMDPSADAVESKEEE 95
+++ + DE +FSP+ D + S EN MD EE
Sbjct: 61 HGSAQN-NYDGDDEGKVTDTHLHNFSPQADINEVSHHYSSENGDTHMDNFVQRSPDLAEE 119
Query: 96 A-------------YEIDGDKLENVLSLLQSSVDGYLESSLDSFELDLHEDFVLKVLETP 142
A Y ID DKLENVLSLLQSS D LESSLD+ +L LHEDF++KVLETP
Sbjct: 120 ANTQIHGEVEGHVDYVIDADKLENVLSLLQSSTDASLESSLDNMDLHLHEDFIVKVLETP 179
Query: 143 LVLGENLVCFFKW--------VTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGV 194
L++G+NL+ FF W VT+ +V L++AICS + KK+ YALWD+VK+IGE+E V
Sbjct: 180 LIVGDNLIKFFNWAIKQPDINVTTRLVHPLVRAICSELRKKDAYALWDLVKDIGEEENTV 239
Query: 195 LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSV 254
L V++LN+LIALFSKLGKGKAAFEVFNKFGD+GCV + ETY++TIEAL RR IFDWA SV
Sbjct: 240 LNVDLLNQLIALFSKLGKGKAAFEVFNKFGDFGCVPDSETYHYTIEALCRRSIFDWASSV 299
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
EKM+ +LPD+EK+GKII WFCKG KA +A++VY LA+EK YPPQ V FLI LCQ
Sbjct: 300 REKMLRAEALPDTEKIGKIICWFCKGDKANDAYLVYLLAKEKNKYPPQPSVNFLIGLLCQ 359
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
++ETVKLAL+MLD FSG RKYAIKPFSSVIR+LCR+KD+ GAK LLSKM+ EGPPPGNA
Sbjct: 360 KNETVKLALEMLDAFSGPKRKYAIKPFSSVIRALCRIKDLDGAKMLLSKMVDEGPPPGNA 419
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
VFNS+I+ YSK GDM A++M +LM RGLKPD++TY +MSGYA+GGQMEEAC++L+EA
Sbjct: 420 VFNSIINGYSKCGDMKEAIKMKQLMVRRGLKPDLFTYAVIMSGYASGGQMEEACKVLSEA 479
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
KK HS+LSPV YHT+IRGYCKLE+FD AL LL EMK GVQ N DEYNKLIQSLCLKALD
Sbjct: 480 KKKHSKLSPVMYHTVIRGYCKLEQFDKALDLLAEMKTFGVQANADEYNKLIQSLCLKALD 539
Query: 495 WRTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIE 532
W AEKLLE M+ GLHLNGITR LIRAVKELE++ IE
Sbjct: 540 WERAEKLLEKMKEDGLHLNGITRGLIRAVKELEDEGIE 577
>gi|224061145|ref|XP_002300357.1| predicted protein [Populus trichocarpa]
gi|222847615|gb|EEE85162.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 639 bits (1649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/451 (68%), Positives = 370/451 (82%), Gaps = 9/451 (1%)
Query: 90 ESKEEEAYEIDGDKLENVLSLLQSSVDGYLESSLDSFELDLHEDFVLKVLETPLVLGENL 149
E+ E E YEID +KLENVL LLQSS DG LES+LD+F LDLHE+FV+KVLETP VLGENL
Sbjct: 18 ENVESETYEIDVEKLENVLHLLQSSDDGSLESTLDTFSLDLHEEFVVKVLETPHVLGENL 77
Query: 150 VCFFKW--------VTSGVVDALLKAICSS-VGKKEVYALWDIVKEIGEKEKGVLTVEIL 200
+ FFKW VT+ +D L+ +ICSS + +K YALWD+V+EIGEK +G+++V L
Sbjct: 78 IRFFKWAMKKQDLSVTTRAIDVLVSSICSSELRRKNAYALWDLVREIGEKNEGLVSVGSL 137
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N+LIAL SKLGKGKAA EVF+K D+GCV + ETYY+TIEAL RR +DWAW VCEKM++
Sbjct: 138 NQLIALLSKLGKGKAALEVFDKSKDFGCVPDSETYYYTIEALCRRSFYDWAWIVCEKMLD 197
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G LPDSEK+GKII WFCKG KAK+AH VY LA+EK PP+ + FLI SLC++D TV
Sbjct: 198 QGPLPDSEKIGKIICWFCKGSKAKDAHKVYLLAKEKSKCPPKPALYFLIGSLCRDDGTVN 257
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
LAL+ML+DF GEA+KYAIKPFSSVIR LCR+KD+ GAK LLSKMI EGPPPGNAVFN+VI
Sbjct: 258 LALEMLNDFEGEAKKYAIKPFSSVIRGLCRIKDLDGAKQLLSKMIVEGPPPGNAVFNTVI 317
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
S Y K GDM A+E++KLM SRGLKPDVYTYT ++SGY+NGGQMEEAC IL+EAKK HS+
Sbjct: 318 SGYCKGGDMKEAIEIMKLMESRGLKPDVYTYTVIISGYSNGGQMEEACYILSEAKKKHSK 377
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
LSPVTYH LIRGYCKL++FD AL+LL EM+ GVQPN DEYNKLIQSLCLK+LDW TAEK
Sbjct: 378 LSPVTYHALIRGYCKLDQFDKALELLAEMEKFGVQPNADEYNKLIQSLCLKSLDWGTAEK 437
Query: 501 LLEDMRLKGLHLNGITRALIRAVKELEEDAI 531
L +M+ KGL+LN ITR+LI AVKELE++ +
Sbjct: 438 LFAEMKEKGLYLNSITRSLITAVKELEQEGL 468
>gi|147784775|emb|CAN64008.1| hypothetical protein VITISV_000279 [Vitis vinifera]
Length = 549
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 332/569 (58%), Positives = 403/569 (70%), Gaps = 49/569 (8%)
Query: 1 MWRSIAAG-SRLVARNF-GVATEKVHCSQTLSLN-ISR----SLSKPSLY--RSSRFLSE 51
MWRS + A+ F + V CS + L ISR S KPS ++ RF S
Sbjct: 1 MWRSATVSLFKNAAKKFRTIPNPSVVCSSSSQLALISRFQHFSTPKPSFLVSQNPRFFSN 60
Query: 52 -SPAANPKDESSF---------SPETDFSSRSFGENEYAQMDPSADAVESKEEEAYEIDG 101
SP + D+S+ S + FS S EN+ Q++ V+ + E +E+D
Sbjct: 61 LSPDIDGDDDSTIESAICSPSESEDQHFSPIS-DENDGTQIE--GFEVDLDKSEGFEVDL 117
Query: 102 DKLENVLSLLQSSVD--GYLESSLDSFELDLHEDFVLKVLETPLVLGENLVCFFKW---- 155
DKLE+VLSLLQSS D G LESS ++ L L+E+FV++VLETP V NL+ FFKW
Sbjct: 118 DKLESVLSLLQSSGDAVGSLESSFNAMGLSLNEEFVVRVLETPFVPANNLIGFFKWSWKN 177
Query: 156 ----VTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLG 211
VT+ VDAL++A+C SV +K+ Y+LWD+VKEIGEKE GVL V ILNELIA F+KLG
Sbjct: 178 PGFSVTTRAVDALVRAVCQSVRRKDTYSLWDLVKEIGEKENGVLNVGILNELIAQFAKLG 237
Query: 212 KGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVG 271
KGKA EVFN FG+YG R IFDWA SVCEKM+ SLPDSEKV
Sbjct: 238 KGKAGLEVFNAFGEYG-----------------RSIFDWALSVCEKMLNASSLPDSEKVW 280
Query: 272 KIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSG 331
IISWFCKG K K+A++VY LA+EK YPP++ V FLI+SLC+ED T+ +A++MLDDFSG
Sbjct: 281 NIISWFCKGRKVKDAYLVYLLAKEKNKYPPKTTVNFLIASLCREDGTISMAVEMLDDFSG 340
Query: 332 EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
E KYAIKP+++VIR LCR KDV GAK LL KMI GPPPGNAVFN VI+ SKAG+M
Sbjct: 341 EECKYAIKPYTAVIRGLCRSKDVDGAKRLLLKMIEAGPPPGNAVFNFVINGLSKAGEMEE 400
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
AM+M+KLM +RGLKPDVYTY+ +MSGYA+GG MEEAC +L+EAK+NHS+LSPVTYHTLIR
Sbjct: 401 AMKMMKLMETRGLKPDVYTYSVIMSGYAHGGMMEEACRVLSEAKRNHSKLSPVTYHTLIR 460
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH 511
GYCKLE+FD A++LL EMK+ GVQPN DEYNKLIQSLCLKALDW+TAEKLLE+M+ GLH
Sbjct: 461 GYCKLEQFDKAVELLGEMKEHGVQPNTDEYNKLIQSLCLKALDWQTAEKLLEEMKQNGLH 520
Query: 512 LNGITRALIRAVKELEEDAIENGEALVEA 540
LNGITR LIRAVKELEE+ E VEA
Sbjct: 521 LNGITRGLIRAVKELEEEGRATEELRVEA 549
>gi|356556344|ref|XP_003546486.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
mitochondrial-like isoform 1 [Glycine max]
gi|356556346|ref|XP_003546487.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
mitochondrial-like isoform 2 [Glycine max]
Length = 538
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 308/547 (56%), Positives = 390/547 (71%), Gaps = 28/547 (5%)
Query: 1 MW-RSIAAGSR--LVARNFGVATEKVHCSQTLSLNISRSLSKPSLYRSSRFLSESPAANP 57
MW R +A +R VA N+ +++ + L I +S + P ++ + RFL S N
Sbjct: 1 MWTRILARATRAVTVAGNYSPIHQRI--CDPIFLKIPKS-TFPQIFNNPRFLVTSNLDN- 56
Query: 58 KDESSFSPETDFSSRSFGENEYAQMDPSADAVESKEEEAYEIDGDKLENVLSLLQSSVDG 117
SP++ +S G+ + A+ A + YE+D DKLE+VL LLQ+S DG
Sbjct: 57 ----ELSPDSSVNS---GDRQLAEEGEGAGGGGDR----YEVDSDKLESVLRLLQTSADG 105
Query: 118 YLESSLDSFELDLHEDFVLKVLETPLVLGENLVCFFKW--------VTSGVVDALLKAIC 169
LES LD +L LH+ V K+ ETP VL ENL+ FF W VT+ +V++L+ AIC
Sbjct: 106 SLESCLDDIDLTLHQQLVTKITETPFVLSENLIRFFWWAWSERSLGVTTPMVESLVLAIC 165
Query: 170 SS-VGKKEV-YALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYG 227
+ V KKEV Y+LWD+VKEIGEKE G+L V+ILNELI+ F +LGKGKAA EVFNKF +
Sbjct: 166 GNDVRKKEVVYSLWDLVKEIGEKESGILNVKILNELISSFLRLGKGKAALEVFNKFEAFH 225
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH 287
CV + +TYYFTIEAL RR+ DWA VC+KM++ LPD EKVG I+SW CKG KAKEAH
Sbjct: 226 CVPDADTYYFTIEALCRRRALDWACGVCQKMVDAQILPDGEKVGAILSWLCKGKKAKEAH 285
Query: 288 VVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRS 347
VY +A EK PP +VV+FL+ LC EDETVK AL+ML+D E R+ AIKPF +V+R+
Sbjct: 286 GVYVVATEKGKQPPVNVVSFLVVKLCGEDETVKFALEMLEDIPEEKRERAIKPFLAVVRA 345
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
LCR+K+V AK L+ KMI +GPPPGNAVFN V++AYSKAG+M A+EM++LM SRGL+PD
Sbjct: 346 LCRIKEVDKAKELVLKMIEDGPPPGNAVFNFVVTAYSKAGEMGKAVEMMRLMESRGLRPD 405
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
VYTYT L S Y+NGG+MEEA +IL E KK H++L PV +HTLIRGYCKLE+FD ALKLL
Sbjct: 406 VYTYTVLASAYSNGGEMEEAQKILAEVKKKHAKLGPVMFHTLIRGYCKLEQFDEALKLLA 465
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRAVKELE 527
EMKD GV P+VDEY+KLIQSLCLKALDW AEKL E+M+ GLHL GITR LIRAVKE+E
Sbjct: 466 EMKDYGVHPSVDEYDKLIQSLCLKALDWEMAEKLHEEMKESGLHLKGITRGLIRAVKEME 525
Query: 528 EDAIENG 534
++ +E G
Sbjct: 526 KEVVEAG 532
>gi|449442429|ref|XP_004138984.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
mitochondrial-like [Cucumis sativus]
gi|449477884|ref|XP_004155152.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
mitochondrial-like [Cucumis sativus]
Length = 479
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 279/442 (63%), Positives = 355/442 (80%), Gaps = 9/442 (2%)
Query: 92 KEEEAYEIDGDKLENVLSLLQSSVDGYLESSLDSFELDLHEDFVLKVLETPLVLGENLVC 151
+E E+Y ++ ++LE+VLSL+QS+VDG ESSLD L L+EDFVLKV+ETP +LGENL+
Sbjct: 22 EEVESYGVNVEQLESVLSLIQSTVDGSFESSLDEMRLTLNEDFVLKVIETPHILGENLIR 81
Query: 152 FFKW---------VTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNE 202
FF+W V++ VVD L++ +C+++ ++ Y+LW+++KEIG K+ +L EILN+
Sbjct: 82 FFRWAVNSHPEFEVSTPVVDVLVRVVCANLRQRVAYSLWELIKEIGGKQTSLLNAEILNQ 141
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LIA FSKLGKGKAA EV N + GCV N E+YYFT+EAL RR +D AW VCEKM+++G
Sbjct: 142 LIAFFSKLGKGKAALEVLNSYEVLGCVPNAESYYFTVEALCRRSSYDLAWPVCEKMLDSG 201
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
S+P+S +VGKIIS FCKG KAK AH VY LA+EK + PQ + LI SLC++DETVKLA
Sbjct: 202 SMPESNRVGKIISLFCKGNKAKNAHSVYLLAKEKHVNLPQCYMNILIHSLCRDDETVKLA 261
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
L+ML+DFS R+ AIKP+ VIRSLCR+KD AKTLL KMI+EGPPPGNA FN+VI
Sbjct: 262 LEMLNDFSTGERRRAIKPYMEVIRSLCRIKDTSKAKTLLQKMIAEGPPPGNAAFNAVICG 321
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
YSKAGD+ AME++KLM SRGLKPDVY+YT ++SGYA GGQM+EA E+L+EAKK H++LS
Sbjct: 322 YSKAGDLEEAMELIKLMESRGLKPDVYSYTAVISGYAKGGQMKEAYEVLDEAKKKHAKLS 381
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
+TYHTLIR +CKLEE+D ALKLL+EMK+ GVQPNVDEYNKLI+SLCLKA+DWRT+E+L
Sbjct: 382 HITYHTLIRNHCKLEEYDSALKLLSEMKNFGVQPNVDEYNKLIRSLCLKAVDWRTSERLF 441
Query: 503 EDMRLKGLHLNGITRALIRAVK 524
E+M+ GLHLNGITR LIRAV+
Sbjct: 442 EEMKENGLHLNGITRGLIRAVR 463
>gi|356547390|ref|XP_003542095.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
mitochondrial-like [Glycine max]
Length = 539
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 300/530 (56%), Positives = 384/530 (72%), Gaps = 28/530 (5%)
Query: 15 NFGVATEKVHCSQTLSLNISRSLSKPSLYRSSRFLSESPAANPKDESSFSPETDFSSRSF 74
N+ + + + S + L I +S + P ++ + RFL S N SP+ SS +
Sbjct: 18 NYSLINQPI--SDPIFLKIPKS-TFPQIFNNPRFLVTSNLDN-----ELSPD---SSVNG 66
Query: 75 GENEYAQMDPSADAVESKEEEAYEIDGDKLENVLSLLQSSVDGYLESSLDSFELDLHEDF 134
G+ + A+ + ++ YE+D D LE+VL LLQ+S DG LES LD +L LH+
Sbjct: 67 GDRQLAEQEEGGGGGDT-----YEVDSDTLESVLRLLQTSADGSLESCLDDMDLTLHQQL 121
Query: 135 VLKVLETPLVLGENLVCFFKW--------VTSGVVDALLKAICSS--VGKKE--VYALWD 182
V K+ ETP VL ENL+ FF W VT+ +V++L+ AIC + V KK+ VY+LWD
Sbjct: 122 VTKITETPFVLSENLIRFFWWAWSERSLEVTTPMVESLVLAICGNDDVRKKKEVVYSLWD 181
Query: 183 IVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEAL 242
+VKEIGEKE G+L V ILNELI+ FS+L KGKAA EVF+KF + CV + +TYYFTIEAL
Sbjct: 182 LVKEIGEKESGLLNVRILNELISSFSRLRKGKAALEVFDKFEAFHCVPDADTYYFTIEAL 241
Query: 243 SRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQ 302
RR+ FDWA VC+KM++ +LPD+EKVG I+SW CKG KAKEAH VY +A EK PP
Sbjct: 242 CRRRAFDWACGVCQKMVDARTLPDAEKVGAILSWLCKGKKAKEAHGVYVVATEKGKLPPV 301
Query: 303 SVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLS 362
+VV+FL+ LC EDETVK AL++L+D E R+ AIKPF +V+R+LCR+K+V AK LL
Sbjct: 302 NVVSFLVLKLCGEDETVKSALEILEDIPEEKRERAIKPFLAVVRALCRIKEVDKAKELLL 361
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG 422
KMI GPPPGNAVFN V++AYSKAG+M A+EM++LM SRGL+PDVYTYT L S Y+NGG
Sbjct: 362 KMIENGPPPGNAVFNFVVTAYSKAGEMGKAVEMMRLMESRGLRPDVYTYTVLASAYSNGG 421
Query: 423 QMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
+MEEA +IL EAKK H +L PV +HTLIRGYCKLE+FD ALKLL EMKD GV+P+VDEY+
Sbjct: 422 EMEEAQKILAEAKKKHVKLGPVMFHTLIRGYCKLEQFDEALKLLAEMKDYGVRPSVDEYD 481
Query: 483 KLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIE 532
KLIQSLCLKALDW+ AEKL E+M+ GLHL GITR LIRAVKE+E++ +E
Sbjct: 482 KLIQSLCLKALDWKMAEKLQEEMKESGLHLKGITRGLIRAVKEMEKEVVE 531
>gi|334185040|ref|NP_186914.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546752|sp|P0C896.1|PP209_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g02650, mitochondrial; Flags: Precursor
gi|332640323|gb|AEE73844.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 576
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 299/577 (51%), Positives = 379/577 (65%), Gaps = 38/577 (6%)
Query: 1 MWRSIAAGSRLVARNFGVA------TEKVHCSQTLSLNISRSLSKPSLYRSSRFLS---- 50
M RS S+ +RN V T+ H +LS S + R+ RF S
Sbjct: 1 MLRSFLCRSQNASRNLAVTRISKKKTQTTHSLTSLSRFSYLESSGNASVRNIRFFSTSPP 60
Query: 51 --ESPAANPKDESSFSPETDFS-------------SRSFGENEYAQMDPSADA-VESKEE 94
E+P + P DE S + + S +G + D+ + + E
Sbjct: 61 TEENPVSLPADEIPISSAAELTLEESVASALGFSESGDYGGTSVEAVGEDGDSEIVAIEN 120
Query: 95 EAYEIDGDKLENVLSLLQSSVDGYLESSLDSFELDLHEDFVLKVLETPLVLGENLVCFFK 154
E Y+ D +KLE+VLSLL+S + LE L++ +DLH DFV++V E+P + G+NL+ F K
Sbjct: 121 EVYQFDDEKLESVLSLLRSDEES-LEFGLNALNVDLHLDFVVRVFESPGISGKNLIRFLK 179
Query: 155 W--------VTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEK-GVLTVEILNELIA 205
W VT+ +V++LL AI S + + Y LWD+VKEIGEKE GVL +EILNELIA
Sbjct: 180 WATQNEEITVTTSLVESLLVAIASDTRRMDAYGLWDLVKEIGEKESCGVLNLEILNELIA 239
Query: 206 LFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLP 265
LF KLGK KAAF+VF+K ++G N +TYY T+EAL +R DWA SVCEKM+++G L
Sbjct: 240 LFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLS 299
Query: 266 DSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDM 325
+ E++G II+WFCK GKA+EA+ VY LA+ K+ P VA LI++LC+ D T+ A +M
Sbjct: 300 EGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTITFAQEM 359
Query: 326 LDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSK 385
L D SGEAR+ IKPFS VI SLCRM++V AK LL MIS+GP PGNAVFN V+ A SK
Sbjct: 360 LGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSK 419
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
GD+ A E+LKLM SRGLKPDVYTYT ++SGYA GG M+EA EIL EAKK H +LSPVT
Sbjct: 420 TGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVT 479
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
YH LIRGYCK+EE+D ALKLLNEM GVQPN DEYNKLIQS CLKALDW AE L E+M
Sbjct: 480 YHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEM 539
Query: 506 RLKGLHLNGITRALIRAVKELEEDA--IENGEALVEA 540
+ KGLHLN I++ LIRAVKE+E +A E+G L EA
Sbjct: 540 KQKGLHLNAISQGLIRAVKEMESEAKVTEDGNLLAEA 576
>gi|6957728|gb|AAF32472.1| hypothetical protein [Arabidopsis thaliana]
Length = 1077
Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust.
Identities = 296/569 (52%), Positives = 376/569 (66%), Gaps = 38/569 (6%)
Query: 9 SRLVARNFGVA------TEKVHCSQTLSLNISRSLSKPSLYRSSRFLS------ESPAAN 56
S+ +RN V T+ H +LS S + R+ RF S E+P +
Sbjct: 510 SQNASRNLAVTRISKKKTQTTHSLTSLSRFSYLESSGNASVRNIRFFSTSPPTEENPVSL 569
Query: 57 PKDESSFSPETDFS-------------SRSFGENEYAQMDPSADA-VESKEEEAYEIDGD 102
P DE S + + S +G + D+ + + E E Y+ D +
Sbjct: 570 PADEIPISSAAELTLEESVASALGFSESGDYGGTSVEAVGEDGDSEIVAIENEVYQFDDE 629
Query: 103 KLENVLSLLQSSVDGYLESSLDSFELDLHEDFVLKVLETPLVLGENLVCFFKW------- 155
KLE+VLSLL+S + LE L++ +DLH DFV++V E+P + G+NL+ F KW
Sbjct: 630 KLESVLSLLRSDEES-LEFGLNALNVDLHLDFVVRVFESPGISGKNLIRFLKWATQNEEI 688
Query: 156 -VTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEK-GVLTVEILNELIALFSKLGKG 213
VT+ +V++LL AI S + + Y LWD+VKEIGEKE GVL +EILNELIALF KLGK
Sbjct: 689 TVTTSLVESLLVAIASDTRRMDAYGLWDLVKEIGEKESCGVLNLEILNELIALFGKLGKS 748
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
KAAF+VF+K ++G N +TYY T+EAL +R DWA SVCEKM+++G L + E++G I
Sbjct: 749 KAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNI 808
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEA 333
I+WFCK GKA+EA+ VY LA+ K+ P VA LI++LC+ D T+ A +ML D SGEA
Sbjct: 809 ITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTITFAQEMLGDLSGEA 868
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
R+ IKPFS VI SLCRM++V AK LL MIS+GP PGNAVFN V+ A SK GD+ A
Sbjct: 869 RRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAK 928
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
E+LKLM SRGLKPDVYTYT ++SGYA GG M+EA EIL EAKK H +LSPVTYH LIRGY
Sbjct: 929 EVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGY 988
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
CK+EE+D ALKLLNEM GVQPN DEYNKLIQS CLKALDW AE L E+M+ KGLHLN
Sbjct: 989 CKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLN 1048
Query: 514 GITRALIRAVKELEEDA--IENGEALVEA 540
I++ LIRAVKE+E +A E+G L EA
Sbjct: 1049 AISQGLIRAVKEMESEAKVTEDGNLLAEA 1077
>gi|297828726|ref|XP_002882245.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328085|gb|EFH58504.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1091
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 291/541 (53%), Positives = 363/541 (67%), Gaps = 48/541 (8%)
Query: 44 RSSRFLS------ESPAANPKDESSFSPETDFS-------------SRSFGEN------- 77
R+ RF S E+P + P DE S + + S FG N
Sbjct: 555 RNIRFFSASPPTEENPVSLPTDEIPISSAAELTLEESVASALGFSESGHFGVNGGTSVEA 614
Query: 78 -----EYAQMDPSADAVESKEEEAYEIDGDKLENVLSLLQSSVDGYLESSLDSFELDLHE 132
EY D A+E++ E Y+ D +KLE+VLSLL+S + LE L++ +DLH
Sbjct: 615 VGGVAEYG--DSEIVAIENEVTEVYQFDDEKLESVLSLLRSDEES-LEFGLNALNVDLHL 671
Query: 133 DFVLKVLETPLVLGENLVCFFKW--------VTSGVVDALLKAICSSVGKKEVYALWDIV 184
DFV++V E P + G+NL+ F KW VT+ +V++LL AI + + Y LWD+V
Sbjct: 672 DFVVRVFEFPGISGKNLIRFLKWATEREEITVTTSLVESLLVAIAGDTRRMDAYGLWDLV 731
Query: 185 KEIGEKEKG--VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEAL 242
KEIGEKE VL +EILNELIALF KLGK KAAF+VF+K ++G N +TYY T+EAL
Sbjct: 732 KEIGEKESSSSVLNLEILNELIALFGKLGKSKAAFDVFSKTAEFGFTPNAKTYYLTLEAL 791
Query: 243 SRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREK-KMYPP 301
+R DWA SVCE+M+++G LP+ E++G IISWF K GKA+EA+ VY LA+ K K PP
Sbjct: 792 CKRSFMDWACSVCERMLKSGVLPEGEQMGNIISWFSKEGKAEEAYSVYELAKTKEKSLPP 851
Query: 302 QSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLL 361
+SV A LIS+LC+ D T+ A +ML D SGEAR+ IKPFS VI SLCRM++V AK+LL
Sbjct: 852 RSV-ATLISALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKSLL 910
Query: 362 SKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG 421
MIS+GP PGNAVFN ++ A SK GD+ A E+LKLM SRGLKPDVYTYT ++SGYA G
Sbjct: 911 LDMISKGPAPGNAVFNLIVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKG 970
Query: 422 GQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEY 481
G M EA EIL EAKK H +LSPVTYH LIRGYCK+EE+D ALKLL EM GVQPN DEY
Sbjct: 971 GMMNEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLKEMDRFGVQPNADEY 1030
Query: 482 NKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDA--IENGEALVE 539
NKLIQS CLKALDW AE L E+M+ KGLHLN I++ LIRAVKE+E +A E+ L E
Sbjct: 1031 NKLIQSFCLKALDWEKAEVLFEEMKQKGLHLNAISQGLIRAVKEMESEAKVTEDDNLLAE 1090
Query: 540 A 540
A
Sbjct: 1091 A 1091
>gi|359495886|ref|XP_002270546.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g02650, mitochondrial-like [Vitis vinifera]
Length = 509
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 275/570 (48%), Positives = 345/570 (60%), Gaps = 91/570 (15%)
Query: 1 MWRSIAAG-SRLVARNF-GVATEKVHCSQTLSLN-ISR----SLSKPSLY--RSSRFLSE 51
MWRS + A+ F + V CS + L ISR S KPS ++ RF S
Sbjct: 1 MWRSATVSLFKNAAKKFRTIPNPSVVCSSSSQLALISRFQHFSTPKPSFLVSQNPRFFSN 60
Query: 52 -SPAANPKDESSF---------SPETDFSSRSFGENEYAQMDPSADAVESKEEEAYEIDG 101
SP + D+S+ S + FS S EN+ Q++ V+ + E +E+D
Sbjct: 61 LSPDIDGDDDSTIESAICSPSESEDQHFSPIS-DENDGTQIE--GFEVDLDKSEGFEVDL 117
Query: 102 DKLENVLSLLQSSVD--GYLESSLDSFELDLHEDFVLKVLETPLVLGENLVCFFKW---- 155
DKLE+VLSLLQSS D G LESS ++ L L+E+FV++VLETP V NL+ FFKW
Sbjct: 118 DKLESVLSLLQSSGDAVGSLESSFNAMGLSLNEEFVVRVLETPFVPANNLIGFFKWSWKN 177
Query: 156 ----VTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLG 211
VT+ VDAL++A+C SV +K+ Y+LWD+VKEIGEKE GVL V ILNELIA F+KLG
Sbjct: 178 PGFSVTTRAVDALVRAVCQSVRRKDTYSLWDLVKEIGEKENGVLNVGILNELIAQFAKLG 237
Query: 212 KGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVG 271
KGKA EVFN FG+YGC N ++YYFTIEAL RR IFDWA SVCEKM+ SLPDSEKV
Sbjct: 238 KGKAGLEVFNAFGEYGCEPNADSYYFTIEALCRRSIFDWALSVCEKMLNASSLPDSEKVW 297
Query: 272 KIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSG 331
IISWFCKG K K+A++VY LA+EK YPP++ V FLI+SLC+ED T+ +A++MLDDFSG
Sbjct: 298 NIISWFCKGRKVKDAYLVYLLAKEKNKYPPKTTVNFLIASLCREDGTISMAVEMLDDFSG 357
Query: 332 EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
E RKYAIKP+++VIR LCR KDV GAK LL KMI GPPPGNAVFN VI+ SKAG+M
Sbjct: 358 EERKYAIKPYTAVIRGLCRSKDVDGAKRLLLKMIEAGPPPGNAVFNFVINGLSKAGEMEE 417
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
AM+M+ + Q ++A E+L E K++ + + Y+ LI+
Sbjct: 418 AMKMMXKLE----------------------QFDKAVELLGEMKEHGVQPNTDEYNKLIQ 455
Query: 452 GYC-KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
C K ++ A KLL EMK GL
Sbjct: 456 SLCLKALDWQTAEKLLEEMKQ------------------------------------NGL 479
Query: 511 HLNGITRALIRAVKELEEDAIENGEALVEA 540
HLNGITR LIRAVKELEE+ E VEA
Sbjct: 480 HLNGITRGLIRAVKELEEEGRATEELRVEA 509
>gi|206575136|gb|ACI14438.1| Os01g67210-like protein [Triticum urartu]
Length = 358
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/352 (56%), Positives = 268/352 (76%), Gaps = 1/352 (0%)
Query: 180 LWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI 239
LWD+VKE+G G L++ +LN+++A+F KL K KAA EV +KF ++GC + ++YY I
Sbjct: 1 LWDLVKEMGSVP-GSLSIPLLNKVLAMFWKLEKSKAALEVLDKFSEFGCTPDGDSYYLAI 59
Query: 240 EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
+A ++ + AW VCEKMI +G PD EK G+I+++FCKG K KEAH VY A+EKK+
Sbjct: 60 QAAGKKSMVGAAWGVCEKMISSGCFPDGEKAGEIVTFFCKGKKVKEAHSVYLAAKEKKVQ 119
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P S + FL+ +L + DETV +AL++L+++ GE+ K+A K F++VI SLCRMK+V AK
Sbjct: 120 IPTSSLDFLVGALAKNDETVSMALELLEEYKGESLKHAGKSFAAVIHSLCRMKNVKDAKK 179
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
LL +M++ GP PG+AVFN VI+ SK G+M A +M+++M SRGL+PDVYTY+ +MSGYA
Sbjct: 180 LLMRMVNLGPAPGSAVFNFVITGLSKEGEMEDAKDMIRVMESRGLRPDVYTYSVIMSGYA 239
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
GG ++EA +L EAKK + +L+ VTYH LIRGYCK+EEF+ AL+ L EMK GVQPNVD
Sbjct: 240 KGGMIDEAHSLLREAKKIYRKLNRVTYHILIRGYCKMEEFEKALECLKEMKKDGVQPNVD 299
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAI 531
EYNKLIQSLCLKA+DWRTAEKLLE+M GL+L GITR+LI AVKELE + +
Sbjct: 300 EYNKLIQSLCLKAMDWRTAEKLLEEMEGSGLYLKGITRSLIAAVKELEMEEV 351
>gi|206575134|gb|ACI14437.1| Os01g67210-like protein [Triticum monococcum]
Length = 358
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/352 (56%), Positives = 267/352 (75%), Gaps = 1/352 (0%)
Query: 180 LWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI 239
LWD+VKE+G G L+ +LN+++A+F KL K KAA EV +KF ++GC + ++YY I
Sbjct: 1 LWDLVKEMGSVP-GSLSTPLLNKVLAMFWKLEKSKAALEVLDKFSEFGCTPDGDSYYLAI 59
Query: 240 EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
+A ++ + AW VCEKMI +G PD EK G+I+++FCKG KA EAH VY A+EKK+
Sbjct: 60 QAAGKKSMVGAAWGVCEKMISSGCFPDGEKAGEIVTFFCKGKKATEAHSVYLAAKEKKVQ 119
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P S + FL+ +L + DETV +AL++L+++ GE+ K+A K F++VI SLCRMK+V AK
Sbjct: 120 IPTSSLDFLVGALAKNDETVSMALELLEEYKGESLKHAGKSFAAVIHSLCRMKNVKDAKK 179
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
LL +M++ GP PG+AVFN VI+ SK G+M A +M+++M SRGL+PDVYTY+ +MSGYA
Sbjct: 180 LLMRMVNLGPAPGSAVFNFVITGLSKEGEMEDAKDMIRVMESRGLRPDVYTYSVIMSGYA 239
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
GG ++EA +L EAKK + +L+ VTYH LIRGYCK+EEF+ AL+ L EMK GVQPNVD
Sbjct: 240 KGGMIDEAHSLLREAKKIYRKLNRVTYHILIRGYCKMEEFEKALECLKEMKKDGVQPNVD 299
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAI 531
EYNKLIQSLCLKA+DWRTAEKLLE+M GL+L GITR+LI AVKELE + +
Sbjct: 300 EYNKLIQSLCLKAMDWRTAEKLLEEMEGSGLYLKGITRSLIAAVKELEMEEV 351
>gi|357126324|ref|XP_003564838.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
mitochondrial-like isoform 1 [Brachypodium distachyon]
gi|357126326|ref|XP_003564839.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
mitochondrial-like isoform 2 [Brachypodium distachyon]
Length = 552
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 232/550 (42%), Positives = 336/550 (61%), Gaps = 32/550 (5%)
Query: 1 MWRSIAAGSRLVARNFGVATEKVHCSQTLSLNISRSLSKPSLYRSSRFLSESPAANPKDE 60
MWRS A L+ + + + + +TL+ P SRFLS SP A P +
Sbjct: 1 MWRSRARTLLLLRSSIPSSPPQTNPFRTLT-------RAPPPRFLSRFLSSSPEALPVPD 53
Query: 61 SSF------------SPETDFSSRSFGENEYAQMDPSADAVESKEEEAYEIDGDKLENVL 108
+S P D + + E + D + S + D +++ V
Sbjct: 54 ASPSSSSAGAVSTSADPAED-NLAALWEEDAGDADDIFVSSASSDTAGSVADDEEVGRVR 112
Query: 109 SLLQSSVDGYLESSLDSFELDLHEDFVLKVL-ETPLVLGENLVCFFKWVTSGVVDAL--- 164
++++S+ + + S++ +D E + VL G+ L+ F+ DA
Sbjct: 113 AVVESTPEDQIPSAIADMVVDFTESLLSAVLFSAENCSGKKLLLLFQSAGKNNPDAKSVA 172
Query: 165 -LKAICSS------VGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAF 217
L+ + S + K + Y LWD VKE+G G ++ ++LN +IA+F KL K KAA
Sbjct: 173 NLEIVASKLADSDEIDKMDAYLLWDFVKEMGSA-PGSVSTQLLNRVIAIFWKLEKSKAAL 231
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
EV +KF ++GC + ++YY I+A ++ + AW VCEKM+ +G PD EK G+I+++F
Sbjct: 232 EVLDKFSEFGCTPDGDSYYLVIQAAGKKSMVGAAWGVCEKMLGSGFFPDGEKTGEIVTFF 291
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
CKG K EAH V+ A+EKK+ P S + FLI +L + DET+ +AL++L+++ G++ K+A
Sbjct: 292 CKGKKVTEAHSVFLAAKEKKVKIPTSALDFLIGALARNDETISVALELLEEYQGKSLKHA 351
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
K F++VI LCRM +V AK LL +M++ GP PG+AVFN VI+A SK G+M A +++
Sbjct: 352 GKSFAAVIHGLCRMNNVKDAKKLLMRMVNLGPAPGSAVFNLVITALSKEGEMEDAKGLIR 411
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
+M SRGL+PD+YTY+ +MSGY GG + EA +L EAKK H +LS VTYH LIRGYCK+E
Sbjct: 412 VMESRGLRPDIYTYSVIMSGYTKGGMISEAHSLLREAKKIHPKLSRVTYHILIRGYCKME 471
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITR 517
EF+ AL+ LNEMK+ G+QPN+DEYNKLIQSLCLKA+DWRTAEKLLE+M GL L GITR
Sbjct: 472 EFEKALECLNEMKEDGLQPNMDEYNKLIQSLCLKAMDWRTAEKLLEEMESSGLCLKGITR 531
Query: 518 ALIRAVKELE 527
+L+ AVKELE
Sbjct: 532 SLVAAVKELE 541
>gi|326494062|dbj|BAJ85493.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 567
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/441 (47%), Positives = 295/441 (66%), Gaps = 12/441 (2%)
Query: 98 EIDGDKLENVLSLLQSSVDGYLESSLDSFELDLHEDFVLKVL-ETPLVLGENLVCFFKWV 156
E ++ V +++QS+ + + S++ +D E + +L G+ L+ FK
Sbjct: 117 EASDQEVARVRAVVQSTPEDQIPSAIADMVVDFTEPLLAAILLSAENCSGKKLLLLFKSA 176
Query: 157 TSGVVD----ALLKAICSSVG------KKEVYALWDIVKEIGEKEKGVLTVEILNELIAL 206
D A L + S V K + Y LWD+VKE+G G L+ +LN ++A+
Sbjct: 177 GKNNPDVKSLANLDIVASKVADSAEIDKMDAYMLWDLVKEMGSV-PGSLSTPLLNRVLAM 235
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
F KL K KAA EV +KF ++GC + ++YY I+A ++ + AW VCEKMI +G PD
Sbjct: 236 FWKLQKSKAALEVLDKFSEFGCTPDGDSYYLAIQAAGKKSMVGAAWGVCEKMISSGCFPD 295
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
+K G+I+++FC+G EAH VY A+EKK+ P S + FL+ +L + D T+ AL++L
Sbjct: 296 GKKTGEIVTFFCQGKMVTEAHSVYLAAKEKKVQIPTSALDFLVGALAKNDATITTALELL 355
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
++ G++ K+A K F++VI SLCRMK+V+ AK LL +M++ GP PG+AVFN VI+ SK
Sbjct: 356 GEYKGDSLKHAGKSFAAVIHSLCRMKNVNDAKKLLMRMVNLGPAPGSAVFNFVITGLSKE 415
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
G+M A +++++M SRGL+PDVYTY+ +MSGYA GG ++EA +L EAKK H + S VTY
Sbjct: 416 GEMEDAKDLIRVMESRGLRPDVYTYSVIMSGYAKGGMIDEAHSLLREAKKIHPKPSRVTY 475
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
H LIRGYCK+EEF+ AL+ L EMK+ G+QPN+DEYNKLIQSLCLKA+DWRTAEKLLE+M
Sbjct: 476 HILIRGYCKMEEFEKALECLKEMKEDGLQPNMDEYNKLIQSLCLKAMDWRTAEKLLEEME 535
Query: 507 LKGLHLNGITRALIRAVKELE 527
GL L GITR+LI AVKELE
Sbjct: 536 GSGLCLKGITRSLIAAVKELE 556
>gi|206575138|gb|ACI14439.1| Os01g67210-like protein [Aegilops speltoides]
Length = 358
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/348 (56%), Positives = 263/348 (75%), Gaps = 1/348 (0%)
Query: 180 LWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI 239
LWD+VKE+G G L+ +LN+++A+F KL K KAA EV +KF ++GC + ++YY I
Sbjct: 1 LWDLVKEMGSVP-GSLSTPLLNKVLAMFWKLEKSKAALEVLDKFSEFGCTPDGDSYYLVI 59
Query: 240 EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
+A ++ + AW CEKMI +G PD +K G+I+++FCKG K EAH VY A+EKK+
Sbjct: 60 QAAGKKSMVGAAWGACEKMISSGCFPDEKKAGEIVTFFCKGKKLTEAHSVYLAAKEKKVQ 119
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P S + FL+ +L + D+TV LAL++L+++ GE+ K+A K F++VI SLCRMK+V AK
Sbjct: 120 IPTSSLDFLVGALAKNDDTVSLALELLEEYKGESLKHAGKSFAAVIHSLCRMKNVKDAKK 179
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
LL +M++ GP PG+AVFN VI+ SK G+M A +M+++M SRGL+PDVYTY+ +MSGYA
Sbjct: 180 LLMRMVNLGPAPGSAVFNFVITGLSKEGEMEDAKDMIRVMESRGLRPDVYTYSVIMSGYA 239
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
GG ++EA +L EAKK + +L+ V+YH LIRGYCK+EEFD AL+ L EMK GVQPNVD
Sbjct: 240 KGGMIDEAHSLLREAKKIYRKLNRVSYHILIRGYCKMEEFDKALECLKEMKQDGVQPNVD 299
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRAVKELE 527
EYNKLIQSLCLKA+DWRTAEKLLE+M GL+L G+TR+LI AVKELE
Sbjct: 300 EYNKLIQSLCLKAMDWRTAEKLLEEMEGSGLYLKGLTRSLIAAVKELE 347
>gi|117586707|dbj|BAF36557.1| pentatricopeptide repeat protein [Oryza sativa Japonica Group]
gi|125572970|gb|EAZ14485.1| hypothetical protein OsJ_04408 [Oryza sativa Japonica Group]
Length = 564
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 233/568 (41%), Positives = 334/568 (58%), Gaps = 48/568 (8%)
Query: 1 MWRSIAAGSRLVARNFGVATEKVHCSQTLSLNISRSLSK--PSLYRSSRFLSESPAANPK 58
MWR A + L+ R+ +H + R+L++ P SRFLS SP P
Sbjct: 1 MWRRSGARALLLLRS------SIHRPLPPPPSPLRALTRAPPPPRPLSRFLSSSPEPLP- 53
Query: 59 DESSFSPETDFSSRSFGENEYAQMDPSA---DAVESKEEEAYE----------------- 98
D + GE+ A DP+ D + S EE
Sbjct: 54 DAGGGAASASSDPTDAGEDGLAS-DPTEAGEDNLASLWEEDAGDADDVFAADASPDPADA 112
Query: 99 -IDGDKLENVLSLLQSSVDGYLESSLDSFELDLHEDFVLKVLETPL--VLGENLVCFFKW 155
+D V ++++S+ + + S+L +D +E + +L + G+ L+ FK
Sbjct: 113 VVDEVLAARVGAVVESTPEDQIPSALADMVVDFNEPLLAAILVSAAESCSGKKLLRLFKS 172
Query: 156 VTSG------------VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNEL 203
VVD + A + K +VY LWD+VKE+G G + ++LN+L
Sbjct: 173 AGKNNPAAKSLANLEIVVDKI--ADSDEIDKMDVYLLWDLVKEMGAV-PGSVNTQVLNKL 229
Query: 204 IALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGS 263
+A+F KL K KAA E F+ F + GC + ++YY I+A R+ + D AW VC+ MI +G
Sbjct: 230 LAMFWKLEKSKAALEAFDMFSELGCAPDGDSYYLAIQAAGRKSMVDAAWRVCDGMISSGC 289
Query: 264 LPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLAL 323
PD EKVG I+ +FCK K KEAH VY A+EKK+ P S + FL+S+L + DET+ AL
Sbjct: 290 FPDGEKVGDIVMFFCKKKKVKEAHSVYITAKEKKVQAPTSALTFLVSALARNDETINTAL 349
Query: 324 DMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAY 383
++L+++ GE+ K A + +++VI LC +V AK +L +M++ GP PG+AVFN VI+A
Sbjct: 350 ELLEEYQGESLKDAGQSYAAVIHGLCNTNNVEDAKKVLMRMVNLGPAPGSAVFNFVITAL 409
Query: 384 SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
SK G+M A ++++M ++G+ PD+YTY+ +MSGYA GG M+EA +L +AK+ H RLS
Sbjct: 410 SKNGEMEDAKGLMRVMENQGICPDIYTYSVIMSGYAKGGMMDEAHALLRDAKRIHPRLSR 469
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
VTYHTLIRGYCK+EEF+ AL+ L EMK+ G++PN+DEYNKLIQSLCLKALDWRTAE LL+
Sbjct: 470 VTYHTLIRGYCKMEEFEKALECLKEMKEDGMEPNMDEYNKLIQSLCLKALDWRTAENLLK 529
Query: 504 DMRLKGLHLNGITRALIRAVKELEEDAI 531
+M GL L G TR+LI AVKELE D +
Sbjct: 530 EMEDGGLCLKGTTRSLIAAVKELEMDEL 557
>gi|125528712|gb|EAY76826.1| hypothetical protein OsI_04786 [Oryza sativa Indica Group]
Length = 564
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 232/568 (40%), Positives = 334/568 (58%), Gaps = 48/568 (8%)
Query: 1 MWRSIAAGSRLVARNFGVATEKVHCSQTLSLNISRSLSK--PSLYRSSRFLSESPAANPK 58
MWR A + L+ R+ +H + R+L++ P SRFLS SP P
Sbjct: 1 MWRRSGARALLLLRS------SIHRPLPPPPSPLRALTRAPPPPRPLSRFLSSSPEPLP- 53
Query: 59 DESSFSPETDFSSRSFGENEYAQMDPSA---DAVESKEEEAYE----------------- 98
D + GE+ A DP+ D + S EE
Sbjct: 54 DAGGGAASASSDPTDAGEDGLAS-DPTEAGEDNLASLWEEDAGDADDVFAADASPDPADA 112
Query: 99 -IDGDKLENVLSLLQSSVDGYLESSLDSFELDLHEDFVLKVLETPL--VLGENLVCFFKW 155
+D V ++++S+ + + S+L +D +E + +L + G+ L+ FK
Sbjct: 113 VVDEVLAARVGAVVESTPEDQIPSALADMVVDFNEPLLAAILVSAAESCSGKKLLLLFKS 172
Query: 156 VTSG------------VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNEL 203
VVD + A + K +VY LWD+VKE+G G + ++LN+L
Sbjct: 173 AGKNNPAAKSLANLEIVVDKI--ADSDEIDKMDVYLLWDLVKEMGAV-PGSVNTQVLNKL 229
Query: 204 IALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGS 263
+A+F KL K KAA E F+ F + GC + ++YY I+A R+ + D AW VC+ MI +G
Sbjct: 230 LAMFWKLEKSKAALEAFDMFSELGCAPDGDSYYLAIQAAGRKSMVDAAWRVCDGMISSGC 289
Query: 264 LPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLAL 323
PD EKVG I+ +FCK K KEAH VY A+EKK+ P S + FL+S+L + DET+ AL
Sbjct: 290 FPDGEKVGDIVMFFCKKKKVKEAHSVYITAKEKKVQAPTSALTFLVSALARNDETINTAL 349
Query: 324 DMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAY 383
++L+++ GE+ K A + +++VI LC +V A+ +L +M++ GP PG+AVFN VI+A
Sbjct: 350 ELLEEYQGESLKDAGQSYAAVIHGLCNTNNVEDARKVLMRMVNLGPAPGSAVFNFVITAL 409
Query: 384 SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
SK G+M A ++++M ++G+ PD+YTY+ +MSGYA GG M+EA +L +AK+ H RLS
Sbjct: 410 SKNGEMEDAKGLMRVMENQGICPDIYTYSVIMSGYAKGGMMDEAHALLRDAKRIHPRLSR 469
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
VTYHTLIRGYCK+EEF+ AL+ L EMK+ G++PN+DEYNKLIQSLCLKALDWRTAE LL+
Sbjct: 470 VTYHTLIRGYCKMEEFEKALECLKEMKEDGMEPNMDEYNKLIQSLCLKALDWRTAENLLK 529
Query: 504 DMRLKGLHLNGITRALIRAVKELEEDAI 531
+M GL L G TR+LI AVKELE D +
Sbjct: 530 EMEDGGLCLKGTTRSLIAAVKELEMDEL 557
>gi|206575140|gb|ACI14440.1| Os01g67210-like protein [Secale cereale]
Length = 358
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/346 (53%), Positives = 250/346 (72%), Gaps = 1/346 (0%)
Query: 180 LWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI 239
LWD+VKE+G G L+ +LN+++A+F KL K KAA EV +KF ++GC + ++YY I
Sbjct: 1 LWDLVKEMGSVP-GSLSTPLLNKVLAIFXKLEKSKAALEVLDKFSEFGCTPDGDSYYLAI 59
Query: 240 EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
+A ++ + AW VCEKMI +G PD +K G+I+++FC+G K EAH VY A+EKK+
Sbjct: 60 QAAGKKSMVGAAWGVCEKMISSGCFPDGKKTGEIVTFFCQGKKVTEAHSVYLAAKEKKVX 119
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P S + FL+ +L DET+ AL++LD++ G + K+A K F++VI SLCRMK+V AK
Sbjct: 120 IPTSSLDFLVGALAXNDETIXTALELLDEYKGXSLKHAGKSFAAVIHSLCRMKNVKDAKK 179
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
LL +M+ GP PG+AVFN VI+ SK G+M A ++++M SRGL+ DVYTY+ +MS YA
Sbjct: 180 LLMRMVDLGPAPGSAVFNFVITGXSKEGEMEDAKGLIRVMESRGLRXDVYTYSEIMSXYA 239
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
GG ++EA +L EAKK H + S VTYH LIRGYCK+EEF+ AL+ L EMK+ G+QPN D
Sbjct: 240 KGGMIDEAHSLLREAKKIHPKPSRVTYHILIRGYCKMEEFEKALECLKEMKEDGLQPNXD 299
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRAVKE 525
EYNKLIQSL LK +DWRTAEKLLE+M GL L ITR+LI AVKE
Sbjct: 300 EYNKLIQSLXLKXMDWRTAEKLLEEMEGSGLCLKXITRSLIAAVKE 345
>gi|224030515|gb|ACN34333.1| unknown [Zea mays]
gi|414879211|tpg|DAA56342.1| TPA: hypothetical protein ZEAMMB73_618544 [Zea mays]
Length = 598
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 218/556 (39%), Positives = 323/556 (58%), Gaps = 72/556 (12%)
Query: 47 RFLSESPAANPKDESSFSPETDFSSRSFGENEYAQMDPSA---DAVESKEEEAYEIDG-- 101
RFLS SP +P +SS + D +F A D + D + S EEA D
Sbjct: 40 RFLSSSP--DPIPDSSSAAAADPFPEAFSSPTKASQDAAEAGEDNLSSMWEEAGHADDIF 97
Query: 102 ------------DKLENVLSLLQSSVDGYLESSLDSFELDLHEDFVLKVLETPLVLG-EN 148
+++ V + ++S+ + + S+L +D +E + VL +
Sbjct: 98 ASPGSADAVADDEEVARVCAAVESTPEDEIASTLADMTVDFNEPLLAAVLLAAEQCSCKK 157
Query: 149 LVCFFKWVTSGV--------VDALLKAICSS--VGKKEVYALWDIVKEIGEKEKGVLTVE 198
L+ F + ++ L+ + S + K + Y LWD +KEIG G ++
Sbjct: 158 LISLFNYAAKNNPASKSLSNLEVLVSKLADSAEIDKADAYLLWDSIKEIGSV-SGSVSTP 216
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+LNE+IA+F K+ K KAA EVF+KF ++GC + ++YY IEA ++ +F A VCEKM
Sbjct: 217 LLNEMIAIFWKVEKSKAALEVFSKFDEFGCTPDSDSYYLVIEAARKKSLFRSACEVCEKM 276
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
I + P+ EKVG+I+ + C+G K K AH +Y +EKK+ P+ + FL+ +L + DET
Sbjct: 277 IGSACFPNGEKVGRILIYLCEGKKVKMAHSLYLAVKEKKIPVPKLALDFLVGALARNDET 336
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCR---MKD---------------------- 353
+ AL++L+++ GE+ K+A K F++V+ +LCR M+D
Sbjct: 337 IGTALELLEEYQGESLKHAGKSFATVVHALCRLNKMEDANNLLMRMVQLEEYKGESLKNA 396
Query: 354 -------VHG---------AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+HG AK LL +M++ GP PGNAVFN VI+A SK G+M A +++
Sbjct: 397 GKTFATVIHGLCRKKKLEDAKALLMRMVNVGPAPGNAVFNFVITALSKQGEMEDAKGLMR 456
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
+M S+G+ PD+YTY+ LMSGYA GG ++EA ++L EAKK H +L+ V YH LIRGYCK+E
Sbjct: 457 MMESQGISPDIYTYSVLMSGYAKGGMIDEAHDLLREAKKIHPKLNRVAYHILIRGYCKME 516
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITR 517
+F+ A + L EMK G+QPNVDEY+KLIQSLCLKA+DWR AEKLLE+M GL L GI+R
Sbjct: 517 DFEKANECLKEMKKDGLQPNVDEYDKLIQSLCLKAMDWRRAEKLLEEMEDSGLCLRGISR 576
Query: 518 ALIRAVKELEEDAIEN 533
+LI AVKELE + +++
Sbjct: 577 SLITAVKELEGEEMQS 592
>gi|226531209|ref|NP_001143372.1| uncharacterized protein LOC100276004 [Zea mays]
gi|195619158|gb|ACG31409.1| hypothetical protein [Zea mays]
Length = 597
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 217/556 (39%), Positives = 323/556 (58%), Gaps = 72/556 (12%)
Query: 47 RFLSESPAANPKDESSFSPETDFSSRSFGENEYAQMDPSA---DAVESKEEEAYEIDG-- 101
RFLS SP +P +SS + D +F A D + D + S EEA + D
Sbjct: 39 RFLSSSP--DPIPDSSSAAAADPFPEAFSSPTKASQDAAEAGEDNLSSMWEEAGDADDIF 96
Query: 102 ------------DKLENVLSLLQSSVDGYLESSLDSFELDLHEDFVLKVLETPLVLG-EN 148
+++ + + ++S+ + + S+L +D +E + VL +
Sbjct: 97 ASPGSADAVADDEEVARICAAVESTPEDEIASTLADMTVDFNEPLLAAVLLAADQCSCKK 156
Query: 149 LVCFFKWVTSGV--------VDALLKAICSS--VGKKEVYALWDIVKEIGEKEKGVLTVE 198
L+ F + ++ L+ + S + K + Y LWD +KEIG G ++
Sbjct: 157 LISLFNYAAKNNPTSKSLSNLEVLVSKLADSAEIDKADAYLLWDSIKEIGSV-PGSVSTP 215
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+LNE+IA+F KL K KAA EVF+KF ++GC + ++YY IEA ++ +F A VCEKM
Sbjct: 216 LLNEMIAIFWKLEKSKAALEVFSKFDEFGCTPDSDSYYLVIEAARKKSLFRSACEVCEKM 275
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
I + P+ EKVG+I+ + C+G K K AH +Y +EKK+ P+ + FL+ +L + DET
Sbjct: 276 IGSACFPNGEKVGRILIYLCEGKKVKMAHSLYLAVKEKKIPVPKLALDFLVGALARNDET 335
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCR---MKD---------------------- 353
+ AL++L+++ GE+ K+A K F++V+ +LCR M+D
Sbjct: 336 IGTALELLEEYQGESLKHAGKSFATVVHALCRLSKMEDANNLLMRMVQLEEYKGESLKNA 395
Query: 354 -------VHG---------AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+HG AK LL +M++ GP PGNAVFN VI+A SK G+M A +++
Sbjct: 396 GKTFATVIHGLCRKKKLEDAKALLMRMVNVGPAPGNAVFNFVITALSKQGEMEDAKGLMR 455
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
+M S+G+ PD+YTY+ LMSGY GG ++EA ++L EAKK H +L+ V YH LIRGYCK+E
Sbjct: 456 MMESQGISPDIYTYSVLMSGYVKGGMIDEAHDLLREAKKIHPKLNRVAYHILIRGYCKME 515
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITR 517
+F+ A + L EMK G+QPNVDEY+KLIQSLCLKA+DWR AEKLLE+M GL L GI+R
Sbjct: 516 DFEKANECLKEMKKDGLQPNVDEYDKLIQSLCLKAMDWRRAEKLLEEMEDSGLCLRGISR 575
Query: 518 ALIRAVKELEEDAIEN 533
+LI AVKELE + +++
Sbjct: 576 SLITAVKELEGEEMQS 591
>gi|242055277|ref|XP_002456784.1| hypothetical protein SORBIDRAFT_03g042680 [Sorghum bicolor]
gi|241928759|gb|EES01904.1| hypothetical protein SORBIDRAFT_03g042680 [Sorghum bicolor]
Length = 602
Score = 360 bits (925), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 214/571 (37%), Positives = 325/571 (56%), Gaps = 74/571 (12%)
Query: 34 SRSLSK-PSLYRSSRFLSESPAANPKDESSFSPETDFSSRSFGENEYAQMDPSADAVESK 92
+R+L+ P SRFL+ SP +P ++S S D +F A D + +A E
Sbjct: 29 TRTLTHLPPPRPLSRFLASSP--DPIPDASSSAAADPFPEAFSSPTEASQDDATEAGEDN 86
Query: 93 EEEAYEIDGD------------------KLENVLSLLQSSVDGYLESSLDSFELDLHEDF 134
+E GD ++ V + ++S+ + + S+L +D +E
Sbjct: 87 LSSMWEEAGDADDIFVSPSGADAVADDEEVARVCAAVESTPEDKIASTLADMIVDFNEPL 146
Query: 135 VLKVLETPLVLG-ENLVCFFKWVTSGV--------VDALLKAICSS--VGKKEVYALWDI 183
+ VL + L+ F + ++ L+ + S + K + Y LWD
Sbjct: 147 LAAVLLAAEQCSCKKLISLFNYAAKNNPAAKSLSNLEILVSKVADSDEIDKTDAYLLWDS 206
Query: 184 VKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALS 243
+KEIG G ++ +LNE+IA+F KL K KAA EVF+KF ++GC + ++YY IEA
Sbjct: 207 IKEIGSV-PGSVSTPLLNEMIAIFWKLEKSKAALEVFSKFDEFGCTPDSDSYYLVIEAAR 265
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS 303
++ +F VCEK+I + P+ EK G+I+++ C+G K K AH +Y A+EKK+ P+S
Sbjct: 266 KKSMFRSVSEVCEKVIGSACFPNGEKTGRILTYLCEGKKVKMAHSLYLAAKEKKIQIPKS 325
Query: 304 VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR---MKD------- 353
+ FL+ +L + DET AL++L+++ GE+ K+A K F++V+ +LCR M+D
Sbjct: 326 ALDFLVGALARNDETTGTALELLEEYQGESLKHAGKSFATVVHALCRVNKMEDANSLLTR 385
Query: 354 ----------------------VHG---------AKTLLSKMISEGPPPGNAVFNSVISA 382
+HG AKTLL +M++ GP PGNAVFN VI+A
Sbjct: 386 MVQLEEYQGESLKNAGKTFATVIHGLCRKKKLEDAKTLLMRMVNVGPAPGNAVFNFVITA 445
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
SK +M A ++++M +G+ PD+YTY+ LMSGY GG + EA ++L EAKK H +L+
Sbjct: 446 LSKQREMEDAKGLMRVMEGQGITPDIYTYSVLMSGYIKGGMISEAHDLLREAKKVHPKLN 505
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
V YH +IRGYCK+E+F+ A++ L EM+ G+ PNVDEY+KLIQSLCLKA+DWR AEKLL
Sbjct: 506 RVAYHIVIRGYCKMEDFEKAIECLKEMRKDGLLPNVDEYDKLIQSLCLKAMDWRRAEKLL 565
Query: 503 EDMRLKGLHLNGITRALIRAVKELEEDAIEN 533
E+M GL L GI+ +LI AVKELE + +++
Sbjct: 566 EEMEDSGLCLRGISHSLIAAVKELEGEEMQS 596
>gi|255645425|gb|ACU23208.1| unknown [Glycine max]
Length = 177
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 120/171 (70%), Positives = 143/171 (83%)
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
MI +GPPPGNAVFN V++AYSKAG+M A+EM++LM SRGL+PDVYTYT L S Y+NGG+
Sbjct: 1 MIEDGPPPGNAVFNFVVTAYSKAGEMGKAVEMMRLMESRGLRPDVYTYTVLASAYSNGGE 60
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
MEEA +IL E KK H++L PV +HTLIRGYCKLE+FD ALKLL EMKD GV P+VDEY+K
Sbjct: 61 MEEAQKILAEVKKKHAKLGPVMFHTLIRGYCKLEQFDEALKLLAEMKDYGVHPSVDEYDK 120
Query: 484 LIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIENG 534
LIQSLCLKALDW AEKL E+M+ GLH GITR LIRAVKE+E++ +E G
Sbjct: 121 LIQSLCLKALDWEMAEKLHEEMKESGLHFKGITRGLIRAVKEMEKEVVEAG 171
>gi|357493815|ref|XP_003617196.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518531|gb|AET00155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 772
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 158/422 (37%), Positives = 233/422 (55%), Gaps = 54/422 (12%)
Query: 134 FVLKVLET---------PLVLGENLVCFFKW--------VTSGVVDALLKAICS------ 170
F+LK++ET P V L+ F KW +T+ V+++L+ AIC
Sbjct: 306 FLLKIIETSCQTIPVETPKVSPHILIHFIKWAFRSNSHLITTPVLESLVSAICDVPTKFD 365
Query: 171 -SVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKL-GKGKAAFEVFNKFGDYGC 228
+ + ++ LWD++K IG E G+L +ILN+L+ F + +GK A +VF+KF + C
Sbjct: 366 VELRQNDILFLWDLLKHIGHSETGLLNTQILNQLLDSFGYVWDQGKTALQVFHKFEVFQC 425
Query: 229 VANQETYYFTIEALSRRK-----IFDWAWSVCEKMI---ETGSLPDSEKVGKIISWFCKG 280
V NQ++Y FT+EAL + + A S+C+K++ ET D E +G ++ W K
Sbjct: 426 VPNQDSYIFTLEALFKTTSCSADMLQQAASICQKIVLHPETLLPDDGEIIGVLLVWSSKN 485
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAF-------LISSLCQEDETVKLALDMLDDFS--- 330
KEA+ +Y A+EK+ P + +I+ LC + ETV LAL ML DF
Sbjct: 486 NMIKEAYAIYLAAKEKRKTNPNWSLDLDMLLSRTMINILCSKKETVYLALQMLIDFDILE 545
Query: 331 ---GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP-P-PGNAVFNSVISAYSK 385
+ + + V+ +LCR +D AK L+ KMI +GP P P +VF+ +ISA K
Sbjct: 546 EVEHWEEGWKSRMCNIVVNALCRFEDFDAAKQLIFKMIEDGPLPYPSQSVFDIIISACVK 605
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS-PV 444
A + A+EM+ L+ S GL YT L ++ M+EA +IL EA+K S+L +
Sbjct: 606 ARETGRALEMVLLLESIGL----YTSNFLRIHSSDSFGMKEAGKILEEARKKDSKLIIAL 661
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ-PNVDEYNKLIQSLCLKALDWRTAEKLLE 503
YH+LI GYCKL FD ALKLL +MK+ GV N+DE +KLI SLCLKA+D + LE
Sbjct: 662 LYHSLIVGYCKLHNFDKALKLLTQMKNFGVSCTNLDELHKLIHSLCLKAMDRKMTIVQLE 721
Query: 504 DM 505
+M
Sbjct: 722 EM 723
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 105/196 (53%), Gaps = 36/196 (18%)
Query: 100 DGDKLENVLSLLQSSVDGY-LESSLDSFEL-----DLHEDFVLKVLET---------PLV 144
D K+ ++LS GY + S L+S +L + + F LKV++T P V
Sbjct: 51 DFHKVMSLLSNAPPHGHGYQIHSDLNSLDLTNLTLEQQQQFALKVIQTSCQTKLVQTPKV 110
Query: 145 LGENLVCFFKWV--------TSGVVDALLKAICSS--------VGKKEVYALWDIVKEIG 188
NL+ F +WV T+ V+++L+ ++CSS + K ++ LWD++K IG
Sbjct: 111 SPHNLILFIRWVWKNYKCLITTPVLESLVSSMCSSESESSHLKLRKNDILFLWDLLKNIG 170
Query: 189 EKEKGVLTVEILNELIALFSKLGK-GKAAFEVFNKFGDYGCVANQETYYFTIEAL----S 243
+ G+L ILN LI FS +G+ GK+A EVF+ F + CV NQ+TYYFT++AL
Sbjct: 171 HYQTGLLNPPILNHLIQFFSIIGREGKSALEVFHMFEVFQCVPNQDTYYFTLQALLTTTC 230
Query: 244 RRKIFDWAWSVCEKMI 259
I A S+C+ ++
Sbjct: 231 SADIIHQASSICQNLL 246
>gi|357521335|ref|XP_003630956.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524978|gb|AET05432.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 772
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 151/433 (34%), Positives = 226/433 (52%), Gaps = 53/433 (12%)
Query: 121 SSLDSFELDLHEDFVLKVLET---------PLVLGENLVCFFKW-----------VTSGV 160
+ ++ LH FVLKV+ET P V NL+ F KW +T+ V
Sbjct: 307 TDFNTMRQQLHH-FVLKVIETSSQTKLIETPKVSPHNLIHFIKWAWMRRNTYQDLITTPV 365
Query: 161 VDALLKAICS-------SVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFS-KLGK 212
+++L+ IC + K +++ LW+++K IG + +L+ ILN+L+ F L +
Sbjct: 366 LESLVSEICRGSTDDNIHLRKNDIFFLWELLKHIGHYQTDLLSTRILNQLLHSFGLMLCQ 425
Query: 213 GKAAFEVFNKFGDYGCVANQETYYFTIEALSRRK----IFDWAWSVCEKMI---ETGSLP 265
GK EVF+KF + CV NQ+TY T++A K + A S+C+KM+ ET
Sbjct: 426 GKTGLEVFHKFEAFQCVPNQDTYIHTLQAFLTTKCTTDMIHQAASMCQKMLLHPETILPD 485
Query: 266 DSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF-------LISSLCQEDET 318
D E +G ++ F K KEA+ ++ A E++ P + +I LC + ET
Sbjct: 486 DGEILGDVLYCFFKRNMIKEAYALFLAANERRKTNPNWPLKLRMLLPLNMIQMLCLKKET 545
Query: 319 VKLALDMLDDFSGEA----RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
V LA ML+D E + + + F+ V +LC KD AK L+ KMI++ P
Sbjct: 546 VHLAFKMLNDIPEEVDDREKLFKLMLFTHVFGALCGFKDFETAKQLILKMIADSLHPSIY 605
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
+ +I+AY KAG++ +EM+ L+ S G Y LM G+ M +IL +A
Sbjct: 606 DISIIITAYVKAGEIGQVLEMVMLLESMGF----YICNPLMFGFPRSKGMLHIKKILEKA 661
Query: 435 KKNHSRL-SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV-QPNVDEYNKLIQSLCLKA 492
KK +L + YHTLI GYCKLE+FD AL+LL +MKD GV N+DEY+KLI L L
Sbjct: 662 KKQDCKLIITLLYHTLIVGYCKLEKFDGALELLTQMKDFGVSHTNLDEYHKLIHYLRLMD 721
Query: 493 LDWRTAEKLLEDM 505
+D + A + LE+M
Sbjct: 722 MDCKMAREQLEEM 734
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 102/195 (52%), Gaps = 37/195 (18%)
Query: 102 DKLENVLSLLQSSVDG----YLESSLDSFELDL----HEDFVLKVLET---------PLV 144
D + V+SLL ++ + S L+S + + F LKV+ET P V
Sbjct: 48 DDFQKVMSLLSNAAPNERGHQIYSDLNSIQFTTLQHQQQHFALKVIETSCQTKFVEAPKV 107
Query: 145 LGENLVCFFK--W------VTSGVVDALLKAICSSVG----KKEVYALWDIVKEIGEKEK 192
NL+ F K W +T+ V+++L+ +ICS+V K ++ LWD++K IG
Sbjct: 108 QPHNLINFIKLVWKNNKDLITTPVLESLVSSICSTVPTPPRKNDILFLWDLLKRIGRHHH 167
Query: 193 ---GVLTVEILNELIALFSKLGK-GKAAFEVFNKFGDYGCVANQETYYFTIEAL----SR 244
GVL ILN LI FS +G+ GK+A EVF+ F + CV N +TYYFT++AL
Sbjct: 168 HTGGVLNARILNSLIQSFSIMGREGKSALEVFHMFEAFQCVPNHDTYYFTLQALLTTTCS 227
Query: 245 RKIFDWAWSVCEKMI 259
+ A S+C+KM+
Sbjct: 228 THMIHQAASICQKML 242
>gi|357521325|ref|XP_003630951.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524973|gb|AET05427.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 151/433 (34%), Positives = 226/433 (52%), Gaps = 53/433 (12%)
Query: 121 SSLDSFELDLHEDFVLKVLET---------PLVLGENLVCFFKW-----------VTSGV 160
+ ++ LH FVLKV+ET P V NL+ F KW +T+ V
Sbjct: 307 TDFNTMRQQLHH-FVLKVIETSSQTKLIETPKVSPHNLIHFIKWAWMRRNTYQDLITTPV 365
Query: 161 VDALLKAICS-------SVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFS-KLGK 212
+++L+ IC + K +++ LW+++K IG + +L+ ILN+L+ F L +
Sbjct: 366 LESLVSEICRGSTDDNIHLRKNDIFFLWELLKHIGHYQTDLLSTRILNQLLHSFGLMLCQ 425
Query: 213 GKAAFEVFNKFGDYGCVANQETYYFTIEALSRRK----IFDWAWSVCEKMI---ETGSLP 265
GK EVF+KF + CV NQ+TY T++A K + A S+C+KM+ ET
Sbjct: 426 GKTGLEVFHKFEAFQCVPNQDTYIHTLQAFLTTKCTTDMIHQAASMCQKMLLHPETILPD 485
Query: 266 DSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF-------LISSLCQEDET 318
D E +G ++ F K KEA+ ++ A E++ P + +I LC + ET
Sbjct: 486 DGEILGDVLYCFFKRNMIKEAYALFLAANERRKTNPNWPLKLRMLLPLNMIQMLCLKKET 545
Query: 319 VKLALDMLDDFSGEA----RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
V LA ML+D E + + + F+ V +LC KD AK L+ KMI++ P
Sbjct: 546 VHLAFKMLNDIPEEVDDREKLFKLMLFTHVFGALCGFKDFETAKQLILKMIADSLHPSIY 605
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
+ +I+AY KAG++ +EM+ L+ S G Y LM G+ M +IL +A
Sbjct: 606 DISIIITAYVKAGEIGQVLEMVMLLESMGF----YICNPLMFGFPRSKGMLHIKKILEKA 661
Query: 435 KKNHSRL-SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV-QPNVDEYNKLIQSLCLKA 492
KK +L + YHTLI GYCKLE+FD AL+LL +MKD GV N+DEY+KLI L L
Sbjct: 662 KKQDCKLIITLLYHTLIVGYCKLEKFDGALELLTQMKDFGVSHTNLDEYHKLIHYLRLMD 721
Query: 493 LDWRTAEKLLEDM 505
+D + A + LE+M
Sbjct: 722 MDCKMAREQLEEM 734
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 102/195 (52%), Gaps = 37/195 (18%)
Query: 102 DKLENVLSLLQSSVDG----YLESSLDSFELDL----HEDFVLKVLET---------PLV 144
D + V+SLL ++ + S L+S + + F LKV+ET P V
Sbjct: 48 DDFQKVMSLLSNAAPNERGHQIYSDLNSIQFTTLQHQQQHFALKVIETSCQTKFVEAPKV 107
Query: 145 LGENLVCFFK--W------VTSGVVDALLKAICSSVG----KKEVYALWDIVKEIGEKEK 192
NL+ F K W +T+ V+++L+ +ICS+V K ++ LWD++K IG
Sbjct: 108 QPHNLINFIKLVWKNNKDLITTPVLESLVSSICSTVPTPPRKNDILFLWDLLKRIGRHHH 167
Query: 193 ---GVLTVEILNELIALFSKLGK-GKAAFEVFNKFGDYGCVANQETYYFTIEAL----SR 244
GVL ILN LI FS +G+ GK+A EVF+ F + CV N +TYYFT++AL
Sbjct: 168 HTGGVLNARILNSLIQSFSIMGREGKSALEVFHMFEAFQCVPNHDTYYFTLQALLTTTCS 227
Query: 245 RKIFDWAWSVCEKMI 259
+ A S+C+KM+
Sbjct: 228 THMIHQAASICQKML 242
>gi|357521327|ref|XP_003630952.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524974|gb|AET05428.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1143
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 151/433 (34%), Positives = 226/433 (52%), Gaps = 53/433 (12%)
Query: 121 SSLDSFELDLHEDFVLKVLET---------PLVLGENLVCFFKW-----------VTSGV 160
+ ++ LH FVLKV+ET P V NL+ F KW +T+ V
Sbjct: 307 TDFNTMRQQLHH-FVLKVIETSSQTKLIETPKVSPHNLIHFIKWAWMRRNTYQDLITTPV 365
Query: 161 VDALLKAICS-------SVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFS-KLGK 212
+++L+ IC + K +++ LW+++K IG + +L+ ILN+L+ F L +
Sbjct: 366 LESLVSEICRGSTDDNIHLRKNDIFFLWELLKHIGHYQTDLLSTRILNQLLHSFGLMLCQ 425
Query: 213 GKAAFEVFNKFGDYGCVANQETYYFTIEALSRRK----IFDWAWSVCEKMI---ETGSLP 265
GK EVF+KF + CV NQ+TY T++A K + A S+C+KM+ ET
Sbjct: 426 GKTGLEVFHKFEAFQCVPNQDTYIHTLQAFLTTKCTTDMIHQAASMCQKMLLHPETILPD 485
Query: 266 DSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF-------LISSLCQEDET 318
D E +G ++ F K KEA+ ++ A E++ P + +I LC + ET
Sbjct: 486 DGEILGDVLYCFFKRNMIKEAYALFLAANERRKTNPNWPLKLRMLLPLNMIQMLCLKKET 545
Query: 319 VKLALDMLDDFSGEA----RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
V LA ML+D E + + + F+ V +LC KD AK L+ KMI++ P
Sbjct: 546 VHLAFKMLNDIPEEVDDREKLFKLMLFTHVFGALCGFKDFETAKQLILKMIADSLHPSIY 605
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
+ +I+AY KAG++ +EM+ L+ S G Y LM G+ M +IL +A
Sbjct: 606 DISIIITAYVKAGEIGQVLEMVMLLESMGF----YICNPLMFGFPRSKGMLHIKKILEKA 661
Query: 435 KKNHSRL-SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV-QPNVDEYNKLIQSLCLKA 492
KK +L + YHTLI GYCKLE+FD AL+LL +MKD GV N+DEY+KLI L L
Sbjct: 662 KKQDCKLIITLLYHTLIVGYCKLEKFDGALELLTQMKDFGVSHTNLDEYHKLIHYLRLMD 721
Query: 493 LDWRTAEKLLEDM 505
+D + A + LE+M
Sbjct: 722 MDCKMAREQLEEM 734
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 102/195 (52%), Gaps = 37/195 (18%)
Query: 102 DKLENVLSLLQSSVDG----YLESSLDSFELDL----HEDFVLKVLET---------PLV 144
D + V+SLL ++ + S L+S + + F LKV+ET P V
Sbjct: 48 DDFQKVMSLLSNAAPNERGHQIYSDLNSIQFTTLQHQQQHFALKVIETSCQTKFVEAPKV 107
Query: 145 LGENLVCFFK--W------VTSGVVDALLKAICSSVG----KKEVYALWDIVKEIGEKEK 192
NL+ F K W +T+ V+++L+ +ICS+V K ++ LWD++K IG
Sbjct: 108 QPHNLINFIKLVWKNNKDLITTPVLESLVSSICSTVPTPPRKNDILFLWDLLKRIGRHHH 167
Query: 193 ---GVLTVEILNELIALFSKLGK-GKAAFEVFNKFGDYGCVANQETYYFTIEAL----SR 244
GVL ILN LI FS +G+ GK+A EVF+ F + CV N +TYYFT++AL
Sbjct: 168 HTGGVLNARILNSLIQSFSIMGREGKSALEVFHMFEAFQCVPNHDTYYFTLQALLTTTCS 227
Query: 245 RKIFDWAWSVCEKMI 259
+ A S+C+KM+
Sbjct: 228 THMIHQAASICQKML 242
>gi|357494381|ref|XP_003617479.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518814|gb|AET00438.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 142/400 (35%), Positives = 204/400 (51%), Gaps = 70/400 (17%)
Query: 137 KVLETPLVLGENLVCFFK--W------VTSGVVDALLKAICSS--------VGKKEVYAL 180
K +ETP NL+ F + W +T+ V+++L+ +IC + + KK++ L
Sbjct: 309 KFVETP---PYNLIHFVELVWKNNKNLITTPVLESLVLSICPTAPTEYDVALKKKDILYL 365
Query: 181 WDIVKEIGEKEKGVLTVEILNELIALFSKLG-----------------KGKAAFEVFNKF 223
W+++K IG + G+L ILN+LI F +G KGKAA +VF+KF
Sbjct: 366 WNLLKHIGHYQTGILNTRILNQLIGFFRYMGKGRMIVGGYSFYGYIWDKGKAALDVFHKF 425
Query: 224 GDYGCVANQETYYFTIEALS----RRKIFDWAWSVCEKMIETGS--LPDSEKV-GKIISW 276
+ CV NQ+TY FT++A+ + A S+C+KM+ LPD K+ G++++W
Sbjct: 426 EVFQCVPNQDTYIFTLQAICGIDYSTDVLQQAASICQKMVLQPDTLLPDDGKILGRLLTW 485
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVV---------AFLISSLCQEDETVKLALDMLD 327
F K KEA+ +Y A EK+ P + F +LC ETV LALD+L
Sbjct: 486 FSKNNMIKEAYALYRAANEKRKRNPNWGLELDRLLPHRIFEFDTLCSRKETVYLALDLLT 545
Query: 328 --DFSGEARK----YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP--PPGNAVFNSV 379
D E + VI +LC+ KD AK L+ KMI++GP P VFN +
Sbjct: 546 VIDIHKEVEHKEEGTKLSHCRKVITALCQFKDFDAAKQLIFKMIADGPLQRPSKEVFNVI 605
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG---GQMEEACEILNEAKK 436
I Y A ++ A+EM+ L+ S GL +TY L G NG M +A EIL EAKK
Sbjct: 606 IKTYVDAREIGQALEMVMLLESIGL----HTYDALTCG--NGSYYSYMTQAKEILEEAKK 659
Query: 437 NHSRL-SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
S+L + YH LI + +D ALKLL EMKD G+Q
Sbjct: 660 KDSKLIVALLYHMLIVDCDFKQNYDKALKLLTEMKDFGLQ 699
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 66/117 (56%), Gaps = 17/117 (14%)
Query: 137 KVLETPLVLGENLVCFFK--W------VTSGVVDALLKAICSSVGKKEVYALWDIVKEIG 188
K+ ET V +NL+ F K W + + V++ L+++I ++V Y IG
Sbjct: 118 KLAETLEVPPQNLIYFIKMLWKDNKDLIDTHVLEYLVESISTTVHYDFNY--------IG 169
Query: 189 EKEKGVLTVEILNELIALFSKLGK-GKAAFEVFNKFGDYGCVANQETYYFTIEALSR 244
E L ILN+LI FS +G+ GKAA +VF+ F + CV NQ+TYY+T++AL R
Sbjct: 170 RYETDFLNARILNKLIESFSVMGQQGKAALDVFHNFDVFQCVPNQDTYYYTLQALLR 226
>gi|295829414|gb|ADG38376.1| AT3G02650-like protein [Capsella grandiflora]
Length = 154
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 89/154 (57%), Positives = 116/154 (75%), Gaps = 2/154 (1%)
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREK-KMYPPQ 302
+R DWA SVCEKM+++G LP+ E++G II+WFCK GKA+EA+ VY LA+ K K PP+
Sbjct: 2 KRSFMDWACSVCEKMLKSGVLPEGEQMGNIITWFCKEGKAEEAYAVYELAKTKEKSLPPR 61
Query: 303 SVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLS 362
S VA LIS+LC+ D T+ A +ML D SGEAR++ IKPFS VI SLCRM++V AK+LL
Sbjct: 62 S-VATLISALCKSDGTITFAQEMLGDLSGEARRHGIKPFSDVIHSLCRMRNVKDAKSLLL 120
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
MIS+GP PGNAVFN ++ A S+ GD+ A E+L
Sbjct: 121 DMISKGPAPGNAVFNLIVHACSRNGDLDEAKEVL 154
Score = 38.5 bits (88), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 3/114 (2%)
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
K+++S G+ P+ +++ + G+ EEA + AK L P + TLI CK
Sbjct: 15 KMLKS-GVLPEGEQMGNIITWFCKEGKAEEAYAVYELAKTKEKSLPPRSVATLISALCKS 73
Query: 457 E-EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
+ A ++L ++ + + ++ +I SLC + + + A+ LL DM KG
Sbjct: 74 DGTITFAQEMLGDLSGEARRHGIKPFSDVIHSLC-RMRNVKDAKSLLLDMISKG 126
>gi|295829416|gb|ADG38377.1| AT3G02650-like protein [Capsella grandiflora]
gi|345290513|gb|AEN81748.1| AT3G02650-like protein, partial [Capsella rubella]
gi|345290519|gb|AEN81751.1| AT3G02650-like protein, partial [Capsella rubella]
gi|345290521|gb|AEN81752.1| AT3G02650-like protein, partial [Capsella rubella]
gi|345290523|gb|AEN81753.1| AT3G02650-like protein, partial [Capsella rubella]
Length = 154
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 89/154 (57%), Positives = 116/154 (75%), Gaps = 2/154 (1%)
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREK-KMYPPQ 302
+R DWA SVCEKM+++G LP+ E++G II+WFCK GKA+EA+ VY LA+ K K PP+
Sbjct: 2 KRSFMDWACSVCEKMLKSGVLPEGEQMGNIITWFCKEGKAEEAYAVYELAKTKEKSVPPR 61
Query: 303 SVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLS 362
S VA LIS+LC+ D T+ A +ML D SGEAR++ IKPFS VI SLCRM++V AK+LL
Sbjct: 62 S-VATLISALCKSDGTITFAQEMLGDLSGEARRHGIKPFSDVIHSLCRMRNVKDAKSLLL 120
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
MIS+GP PGNAVFN ++ A S+ GD+ A E+L
Sbjct: 121 DMISKGPAPGNAVFNLIVHACSRNGDLDEAKEVL 154
>gi|295829410|gb|ADG38374.1| AT3G02650-like protein [Capsella grandiflora]
Length = 154
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 88/154 (57%), Positives = 116/154 (75%), Gaps = 2/154 (1%)
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREK-KMYPPQ 302
+R DWA SVCEKM+++G LP+ E++G JI+WFCK GKA+EA+ VY LA+ K K PP+
Sbjct: 2 KRSFMDWACSVCEKMLKSGXLPEGEQMGNJITWFCKEGKAEEAYAVYELAKXKEKSLPPR 61
Query: 303 SVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLS 362
S VA LIS+LC+ D T+ A +ML D SGEAR++ IKPFS VI SLCRM++V AK+LL
Sbjct: 62 S-VATLISALCKSDGTITFAQEMLGDLSGEARRHGIKPFSDVIHSLCRMRNVKDAKSLLL 120
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
MIS+GP PGNAVFN ++ A S+ GD+ A E+L
Sbjct: 121 DMISKGPAPGNAVFNLIVHACSRNGDLDEAKEVL 154
>gi|295829412|gb|ADG38375.1| AT3G02650-like protein [Capsella grandiflora]
Length = 154
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 88/154 (57%), Positives = 116/154 (75%), Gaps = 2/154 (1%)
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREK-KMYPPQ 302
+R DWA SVCEKM+++G LP+ E++G +I+WFCK GKA+EA+ VY LA+ K K PP+
Sbjct: 2 KRSFMDWACSVCEKMLKSGVLPEGEQMGNLITWFCKEGKAEEAYAVYELAKTKEKSLPPR 61
Query: 303 SVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLS 362
S VA LIS+LC+ D T+ A +ML D SGEAR++ IKPFS VI SLCRM++V AK+LL
Sbjct: 62 S-VATLISALCKSDGTITFAQEMLGDLSGEARRHGIKPFSDVIHSLCRMRNVKDAKSLLL 120
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
MIS+GP PGNAVFN ++ A S+ GD+ A E+L
Sbjct: 121 DMISKGPAPGNAVFNLIVHACSRNGDLDEAKEVL 154
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 3/114 (2%)
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
K+++S G+ P+ L++ + G+ EEA + AK L P + TLI CK
Sbjct: 15 KMLKS-GVLPEGEQMGNLITWFCKEGKAEEAYAVYELAKTKEKSLPPRSVATLISALCKS 73
Query: 457 E-EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
+ A ++L ++ + + ++ +I SLC + + + A+ LL DM KG
Sbjct: 74 DGTITFAQEMLGDLSGEARRHGIKPFSDVIHSLC-RMRNVKDAKSLLLDMISKG 126
>gi|345290509|gb|AEN81746.1| AT3G02650-like protein, partial [Capsella rubella]
gi|345290511|gb|AEN81747.1| AT3G02650-like protein, partial [Capsella rubella]
gi|345290515|gb|AEN81749.1| AT3G02650-like protein, partial [Capsella rubella]
gi|345290517|gb|AEN81750.1| AT3G02650-like protein, partial [Capsella rubella]
Length = 154
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 88/154 (57%), Positives = 116/154 (75%), Gaps = 2/154 (1%)
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREK-KMYPPQ 302
+R DWA SVCEKM+++G LP+ +++G II+WFCK GKA+EA+ VY LA+ K K PP+
Sbjct: 2 KRSFMDWACSVCEKMLKSGVLPEGDQMGNIITWFCKEGKAEEAYAVYELAKTKEKSVPPR 61
Query: 303 SVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLS 362
S VA LIS+LC+ D T+ A +ML D SGEAR++ IKPFS VI SLCRM++V AK+LL
Sbjct: 62 S-VATLISALCKSDGTITFAQEMLGDLSGEARRHGIKPFSDVIHSLCRMRNVKDAKSLLL 120
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
MIS+GP PGNAVFN ++ A S+ GD+ A E+L
Sbjct: 121 DMISKGPAPGNAVFNLIVHACSRNGDLDEAKEVL 154
>gi|295829418|gb|ADG38378.1| AT3G02650-like protein [Capsella grandiflora]
Length = 154
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/153 (55%), Positives = 112/153 (73%)
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS 303
+R DWA SVCEKM+++G LP+ ++G II+WFCK GKA+EA+ VY LA+ K+ P
Sbjct: 2 KRSFMDWACSVCEKMLKSGVLPEGXQMGNIITWFCKEGKAEEAYAVYELAKTKEKSXPPR 61
Query: 304 VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSK 363
VA LIS+LC+ D T+ A +ML D SGEAR++ IKPFS VI SLCRM++V AK+LL
Sbjct: 62 SVATLISALCKSDGTITFAQEMLGDLSGEARRHGIKPFSDVIHSLCRMRNVKDAKSLLLD 121
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
MIS+GP PGNAVFN ++ A S+ GD+ A E+L
Sbjct: 122 MISKGPAPGNAVFNLIVHACSRNGDLDEAKEVL 154
>gi|295829420|gb|ADG38379.1| AT3G02650-like protein [Neslia paniculata]
Length = 154
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/154 (57%), Positives = 115/154 (74%), Gaps = 2/154 (1%)
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREK-KMYPPQ 302
+R DWA SVCEKM+++G LP+ E++G II+WFCK GKA+EA+ VY LA+ K K PP+
Sbjct: 2 KRSFMDWACSVCEKMLKSGVLPEGEQMGNIITWFCKEGKAEEAYAVYELAKTKEKSLPPR 61
Query: 303 SVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLS 362
S VA LIS+LC+ D T+ A +ML D SGEAR++ IKPFS VI SLCRM+ V AK+LL
Sbjct: 62 S-VATLISALCKSDGTITFAQEMLGDLSGEARRHGIKPFSDVIHSLCRMRYVKDAKSLLL 120
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
MIS+GP PGNAVFN ++ A S+ GD+ A E+L
Sbjct: 121 DMISKGPAPGNAVFNLIVHACSRNGDLDEAKEVL 154
>gi|356551136|ref|XP_003543934.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g02650, mitochondrial-like [Glycine max]
Length = 206
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/158 (57%), Positives = 116/158 (73%), Gaps = 1/158 (0%)
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
++N V++AYSK G+M MEM L S G P VYTYT L S Y NGG MEEA +IL EA
Sbjct: 42 LYNFVVTAYSKVGEMGKPMEMTSLRESTGCIPHVYTYTVLASAYXNGGDMEEAPKILAEA 101
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
KK +L V +HTLIRGYCKLE+F ALKL ++ + +P+VDEY+KLIQSLCLKALD
Sbjct: 102 KKKQVKLRHVMFHTLIRGYCKLEQFHEALKLSAGVR-LWCRPSVDEYDKLIQSLCLKALD 160
Query: 495 WRTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIE 532
W AEKLLE+M+ GLHL G+TR LI+ VKE++++ ++
Sbjct: 161 WEMAEKLLEEMKGSGLHLKGMTRGLIKVVKEMDKEVVK 198
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 89/210 (42%), Gaps = 45/210 (21%)
Query: 168 ICSSVGK-KEVYALWDIVKEIGE-KEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGD 225
IC K VY+LW++V +IGE KE G+L V ILN+ + L++ ++K G+
Sbjct: 2 ICKCAHKLYSVYSLWELVNDIGEKKESGLLNVRILNQHLLLYN------FVVTAYSKVGE 55
Query: 226 YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKE 285
G +E S R+ TG +P + S + GG +E
Sbjct: 56 MG---------KPMEMTSLRE-------------STGCIPHVYTYTVLASAYXNGGDMEE 93
Query: 286 AHVVYTLAREKKMYPPQSVVAFLISSLC---QEDETVKLALDMLDDFSGEARKY---AIK 339
A + A++K++ + LI C Q E +KL S R + ++
Sbjct: 94 APKILAEAKKKQVKLRHVMFHTLIRGYCKLEQFHEALKL--------SAGVRLWCRPSVD 145
Query: 340 PFSSVIRSLC-RMKDVHGAKTLLSKMISEG 368
+ +I+SLC + D A+ LL +M G
Sbjct: 146 EYDKLIQSLCLKALDWEMAEKLLEEMKGSG 175
>gi|357466485|ref|XP_003603527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492575|gb|AES73778.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 417
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/206 (41%), Positives = 112/206 (54%), Gaps = 30/206 (14%)
Query: 297 KMYPPQSVVAFLISSLC--------QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSL 348
++ P I +LC + + KL M RK +K FS +++
Sbjct: 224 QLVPTAETYCLTIEALCTGTGPKKSETERLKKLMQYMWQQLIENKRKRGMKTFSDFVQAS 283
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
C KDV AK + KMI+ GPPP NA FN VI+ YSKAG+M A+EML L+ SR LKPDV
Sbjct: 284 CSFKDVDAAKKFVFKMIANGPPPRNAAFNFVITGYSKAGEMGQAVEMLSLLESRDLKPDV 343
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNE 468
Y+Y+ + S Y++ G+MEEA +IL E LE FD AL+L++E
Sbjct: 344 YSYSAIASAYSDVGKMEEARKILEE----------------------LERFDEALELVSE 381
Query: 469 MKDVGVQPNVDEYNKLIQSLCLKALD 494
MK GV D+Y KLIQSLCLKA D
Sbjct: 382 MKGFGVCTTADDYKKLIQSLCLKAFD 407
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 125/278 (44%), Gaps = 39/278 (14%)
Query: 99 IDGDKLENVLSLLQSSVDGYL--ESSLDSFELDLHEDFVLKVLETPLVLGENLVCFFKWV 156
I+ +KLE +LSL+QS+ D ++ SSLD L +H+DF++KVLE L +L +
Sbjct: 137 INDEKLEKLLSLMQSNDDDHVVEPSSLDHMNLTIHQDFIIKVLEK-TELQHSL-----HL 190
Query: 157 TSGVVDALLKAICSS----VGKKEVYAL-WDIVKEIGEKEKGVLTVEILNELIALFSKLG 211
T+ V+ +L+ IC + + K+ Y L + + E LT+E AL + G
Sbjct: 191 TTLVLQSLVFKICGNFRLCLRDKDTYILSLGFGQLVPTAETYCLTIE------ALCTGTG 244
Query: 212 KGKAAFEVFNKFGDY---GCVANQ-----ETYYFTIEALSRRKIFDWAWSVCEKMIETGS 263
K+ E K Y + N+ +T+ ++A K D A KMI G
Sbjct: 245 PKKSETERLKKLMQYMWQQLIENKRKRGMKTFSDFVQASCSFKDVDAAKKFVFKMIANGP 304
Query: 264 LPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP---PQSVVAFLISSLCQEDETVK 320
P + +I+ + K G+ +A + +L + + P S +A S + + +E K
Sbjct: 305 PPRNAAFNFVITGYSKAGEMGQAVEMLSLLESRDLKPDVYSYSAIASAYSDVGKMEEARK 364
Query: 321 L---------ALDMLDDFSGEARKYAIKPFSSVIRSLC 349
+ AL+++ + G + +I+SLC
Sbjct: 365 ILEELERFDEALELVSEMKGFGVCTTADDYKKLIQSLC 402
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 156/315 (49%), Gaps = 3/315 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LIA F++ K + A ++ + + GC N TY ++AL + + A V +KMIE G
Sbjct: 63 LIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGG 122
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P+ ++ FCK G +A + + K M P + LI LC+ + ++ A
Sbjct: 123 FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLE-A 181
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++L++ +S++I LC+ + A+ +L +M G P V++S+I A
Sbjct: 182 KEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHA 241
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ K+G + A + L+ MR + PDV TY ++ G G++ EA IL++ +++ L
Sbjct: 242 FCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLP 301
Query: 443 P-VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
VTY T+I G CK + A KLL+ M G P+V Y +I LC K AE L
Sbjct: 302 DVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLC-KCGRLEEAEYL 360
Query: 502 LEDMRLKGLHLNGIT 516
L+ M+ G N +T
Sbjct: 361 LQGMKRAGCAPNVVT 375
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 170/360 (47%), Gaps = 16/360 (4%)
Query: 151 CFFKWVTSGV-VDALLKAICSSVGKKEVYALWDIVKEI--GEKEKGVLTVEILNELIALF 207
C VT V VDAL K S VG A D+VK++ G V+T N L+ F
Sbjct: 88 CPPNLVTYNVLVDALCKL--SMVG-----AAQDVVKKMIEGGFAPNVMT---FNSLVDGF 137
Query: 208 SKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDS 267
K G A ++ G N TY I+ L + + F A V E+M +G PD+
Sbjct: 138 CKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDA 197
Query: 268 EKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLD 327
+I CK K +EA + P V + +I + C+ + ++ A L
Sbjct: 198 FTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLE-AQKTLQ 256
Query: 328 DFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP-PGNAVFNSVISAYSKA 386
+ + + + +++VI LC++ + A+ +L +M G P +++VI+ K+
Sbjct: 257 EMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKS 316
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
+ A ++L M G PDV TYT ++ G G++EEA +L K+ + VTY
Sbjct: 317 DMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTY 376
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
TLI G CK + D A +++ EM++ G PN+ YN ++ LC+ + A++L++ M+
Sbjct: 377 TTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSG-RIKEAQQLVQRMK 435
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 129/258 (50%), Gaps = 9/258 (3%)
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--L 308
A + E+M G PD+ II+ G A + + M +VV + L
Sbjct: 9 ALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA-----MDHLRSMGCDPNVVTYTAL 63
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
I++ + + ++ A+ +L++ + ++ ++ +LC++ V A+ ++ KMI G
Sbjct: 64 IAAFARAKK-LEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGG 122
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P FNS++ + K G++ A ++L +M ++G++P+V TY+ L+ G + EA
Sbjct: 123 FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAK 182
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
E+L E K + TY LI G CK ++ + A ++L M G P+V Y+ +I +
Sbjct: 183 EVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAF 242
Query: 489 CLKALDWRTAEKLLEDMR 506
C K+ A+K L++MR
Sbjct: 243 C-KSGKLLEAQKTLQEMR 259
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 133/299 (44%), Gaps = 5/299 (1%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G AA E+ + G + T+ I A++ D A M G P+
Sbjct: 4 GDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTY 60
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
+I+ F + K +EA + RE+ P L+ +LC+ V A D++
Sbjct: 61 TALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKL-SMVGAAQDVVKKMI 119
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
+ F+S++ C+ +V A+ LL M+++G P ++++I K+
Sbjct: 120 EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFL 179
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A E+L+ M++ G+ PD +TY+ L+ G ++EEA ++L + V Y ++I
Sbjct: 180 EAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSII 239
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
+CK + A K L EM+ P+V YN +I LC K A+ +L+ M+ G
Sbjct: 240 HAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLC-KLGKIAEAQVILDQMQESG 297
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 88/168 (52%), Gaps = 4/168 (2%)
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
C D+H A LL +M S G P +I+A + AGD+ AM+ L RS G P+V
Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHL---RSMGCDPNV 57
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNE 468
TYT L++ +A ++EEA ++L E ++ + VTY+ L+ CKL A ++ +
Sbjct: 58 VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117
Query: 469 MKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
M + G PNV +N L+ C + + A KLL M KG+ N +T
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRG-NVDDARKLLGIMVAKGMRPNVVT 164
>gi|115441617|ref|NP_001045088.1| Os01g0897500 [Oryza sativa Japonica Group]
gi|113534619|dbj|BAF07002.1| Os01g0897500, partial [Oryza sativa Japonica Group]
Length = 108
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 70/101 (69%), Positives = 83/101 (82%)
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
L +AK+ H RLS VTYHTLIRGYCK+EEF+ AL+ L EMK+ G++PN+DEYNKLIQSLCL
Sbjct: 1 LRDAKRIHPRLSRVTYHTLIRGYCKMEEFEKALECLKEMKEDGMEPNMDEYNKLIQSLCL 60
Query: 491 KALDWRTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAI 531
KALDWRTAE LL++M GL L G TR+LI AVKELE D +
Sbjct: 61 KALDWRTAENLLKEMEDGGLCLKGTTRSLIAAVKELEMDEL 101
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 190/423 (44%), Gaps = 22/423 (5%)
Query: 102 DKLENVLSLLQSSVDGYLESSLDSFELDLHEDFVLKVLETPLVLGENLVCFFKWVTSGVV 161
D+L++ + LL+ VD ++ S+ LH +E L L E +V + VV
Sbjct: 244 DRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMV--TRGCPPDVV 301
Query: 162 D--ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
++ +C E + D + + G + V+T L+ F ++G A E+
Sbjct: 302 SYTTVINGLCKLDQVDEACRVMDKMIQRG-CQPNVIT---YGTLVDGFCRVGDLDGAVEL 357
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
K + G N TY + RR + A V + MI+TG PD+ IIS FCK
Sbjct: 358 VRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCK 417
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE------DETVKLALDMLDDFSGEA 333
GK +EAH + + P + ++ LI +LC+ E +++++ M D + +
Sbjct: 418 AGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGM--DCAPDV 475
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
Y+I +I +LC+ K + A++ L M+ P +NSV+ K+ + A
Sbjct: 476 VAYSI-----LIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAF 530
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
+ MR+ G+ PDV TY+ ++ + ++ A ++L K+ VTY LI G
Sbjct: 531 LLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGL 590
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
CK D A + EM G PN+ YN LI LC K A ++LE MR + +
Sbjct: 591 CKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLC-KINKVEQAAEMLEIMRKQSCTPD 649
Query: 514 GIT 516
IT
Sbjct: 650 SIT 652
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 111/447 (24%), Positives = 191/447 (42%), Gaps = 58/447 (12%)
Query: 108 LSLLQSSVDGY-----LESSLDSFELDLHEDFVLKVLETPLVLGENLVCFFKWVTSG--- 159
+S+L+ V G L +LD + L + V KVL+ + G LV FF+W +
Sbjct: 64 ISVLERIVQGASDEQALRVALDEYRGQLSPEIVGKVLQRLIDPGAALV-FFEWAETRDGY 122
Query: 160 -----VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGK 214
+ LL + V + D+ + E + G TV + LI+ F + GK
Sbjct: 123 QHEIFCCNCLLNVL---VKAHQYSQAHDLFRSRIEGQWGGDTV-TYSTLISGFIRAGKIL 178
Query: 215 AAFEVFNKFGDYG----------------------------------CVANQETYYFTIE 240
A+E+F++ G C + TY I
Sbjct: 179 PAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMIN 238
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP 300
LS+ D A + E+M++ G P+ ++ FCK + + A ++ L +
Sbjct: 239 GLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENA--LWLLEQMVTRGC 296
Query: 301 PQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
P VV++ +I+ LC+ D+ V A ++D + + + +++ CR+ D+ GA
Sbjct: 297 PPDVVSYTTVINGLCKLDQ-VDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAV 355
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
L+ KM G P +N+++ + + DM A ++L++M G PD Y+ ++SG+
Sbjct: 356 ELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGF 415
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G++ EA ++L + + R TLI CK D A +LL + P+V
Sbjct: 416 CKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDV 475
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDM 505
Y+ LI +LC KA AE L+ M
Sbjct: 476 VAYSILIHALC-KAKRLPEAESWLDVM 501
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 163/348 (46%), Gaps = 19/348 (5%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +IA K K + + CV + T+ I+A+ + D A+ + + E
Sbjct: 1127 NTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQE 1186
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEA-HVVYTLAREKKMYPPQSVVAFLISSLCQE---D 316
+G P+ ++ CK + +A +++ + R++ P +I LC+ D
Sbjct: 1187 SGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVD 1246
Query: 317 ETVKLALDMLDD-FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
KL L ML D + + Y+I VI SLC+ + + A +L M+ G PG
Sbjct: 1247 RAYKLFLQMLSDGLAPDDVTYSI-----VISSLCKWRFMDEANNVLELMLKNGFDPGAIT 1301
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+ ++I + K G++ A+E+L+L+ S+G PDV T++ + + G++ +A E+L
Sbjct: 1302 YGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETML 1361
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+ VTY+TL++G+C + A+ L M+ G +P+ Y L+ L +D
Sbjct: 1362 RAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHL----VDK 1417
Query: 496 RTAEKLLED----MRLKGLHLNGITRALIRAVKELEEDAIENGEALVE 539
++ + LL + M G LN + + A E+E D + G A+V+
Sbjct: 1418 KSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEAD-VRLGCAIVD 1464
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 163/396 (41%), Gaps = 51/396 (12%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVE-ILNELIALFSKLGKGKAAFEVF 220
+ ++K +CS+ L+ ++E G V T I++ L+ K GK A +
Sbjct: 916 NVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLV----KSGKVDDACRLV 971
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
GC N TY + L + D A ++ ++M +G P+ II CK
Sbjct: 972 EDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKL 1031
Query: 281 GKAKEAH---------------VVYT--------------------LAREKKMYPPQSVV 305
G+ EA+ V YT + EK P
Sbjct: 1032 GRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTY 1091
Query: 306 AFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI 365
L+ C++DE V+ A +L + + +++VI LC+ VH LL +M+
Sbjct: 1092 NSLLDMFCKKDE-VERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQML 1150
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
S P FN++I A K + A E+ L++ G P++ TY L+ G + +
Sbjct: 1151 SNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFD 1210
Query: 426 EACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
+A +L E + SP +TY+T+I G CK + D A KL +M G+ P+ Y+
Sbjct: 1211 QAEYLLREMTRKQG-CSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSI 1269
Query: 484 LIQSLCLKALDWR---TAEKLLEDMRLKGLHLNGIT 516
+I SLC WR A +LE M G IT
Sbjct: 1270 VISSLC----KWRFMDEANNVLELMLKNGFDPGAIT 1301
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 118/274 (43%), Gaps = 1/274 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V L+ LI K +A E+ C + Y I AL + K A S +
Sbjct: 440 VACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLD 499
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
M++ PD ++ CK + +A +++ R + P + +I S C+ D
Sbjct: 500 VMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCK-D 558
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ A ML+ + +S++I LC+ V A + +M+ G P +
Sbjct: 559 NNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTY 618
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N++I K + A EML++MR + PD TYT L++G N ++EEA +L E K
Sbjct: 619 NTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKD 678
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
+TY TL+R K + +LL EM+
Sbjct: 679 KGCLPDRMTYGTLLRALQKTNNLELVEQLLKEME 712
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 116/244 (47%), Gaps = 12/244 (4%)
Query: 248 FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVV-A 306
FDWA S + G D+ ++ + + K+A VY R K P
Sbjct: 831 FDWATS------QEGYNHDTYTCNCLLQALLRLKRPKDALQVY---RNKLCCSPNMFTFT 881
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
LI LC+ + + A ++L + + + VI+ LC + + A L +M
Sbjct: 882 ILIHGLCRAGD-IGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEE 940
Query: 367 EGP-PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
G PP +++++ + K+G + A +++ M S+G P+V TY+ L+ G G+++
Sbjct: 941 SGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLD 1000
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
EA +L ++ + VTY+T+I G+CKL D A LL EM D G QPNV Y L+
Sbjct: 1001 EATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLL 1060
Query: 486 QSLC 489
+ C
Sbjct: 1061 DAFC 1064
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 126/255 (49%), Gaps = 3/255 (1%)
Query: 266 DSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDM 325
D+ +IS F + GK A+ ++ K + V ++ LC + L
Sbjct: 160 DTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLH- 218
Query: 326 LDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSK 385
+ S ++ ++++I L + + A LL +M+ G P +N+V+ + K
Sbjct: 219 FREMSKTCPPDSVT-YNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCK 277
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
A + A+ +L+ M +RG PDV +YT +++G Q++EAC ++++ + + + +T
Sbjct: 278 ANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVIT 337
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
Y TL+ G+C++ + D A++L+ +M + G +PN YN ++ C + D A ++L+ M
Sbjct: 338 YGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRN-DMERAHQVLQMM 396
Query: 506 RLKGLHLNGITRALI 520
G + I + I
Sbjct: 397 IQTGCPPDAINYSTI 411
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 182/435 (41%), Gaps = 53/435 (12%)
Query: 118 YLESSLDSFELDLHEDFVLKVLETPLVLGENLVCFFKWVTSG--------VVDALLKAIC 169
Y E++L+ F L V KVL+ + G+ + FF W TS + LL+A+
Sbjct: 797 YAETALERFTGKLTTTVVGKVLQG-VRNGDAALGFFDWATSQEGYNHDTYTCNCLLQALL 855
Query: 170 SSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCV 229
K+ ++ + + T IL I + G A+E+ + +G
Sbjct: 856 RLKRPKDALQVY---RNKLCCSPNMFTFTIL---IHGLCRAGDIGTAYELLKEMPRHGVP 909
Query: 230 ANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLP-DSEKVGKIISWFCKGGKAKEAHV 288
N + I+ L + D A + ++M E+GS P D I+ K GK +A
Sbjct: 910 QNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACR 969
Query: 289 VYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSL 348
+ K P + L+ LC+ + + A +L + I ++++I
Sbjct: 970 LVEDMVSKGCSPNVVTYSSLLHGLCKAGK-LDEATALLQRMTRSGCSPNIVTYNTIIDGH 1028
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
C++ + A LL +M+ G P + ++ A+ K G A+ ++++M +G P++
Sbjct: 1029 CKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNL 1088
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK----------LEE 458
+TY L+ + ++E AC++L+ + + V+Y+T+I G CK LE+
Sbjct: 1089 FTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQ 1148
Query: 459 F-------------------------DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
D A +L N +++ G PN+ YN L+ LC K+
Sbjct: 1149 MLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLC-KSR 1207
Query: 494 DWRTAEKLLEDMRLK 508
+ AE LL +M K
Sbjct: 1208 RFDQAEYLLREMTRK 1222
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 158/357 (44%), Gaps = 26/357 (7%)
Query: 181 WDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFT-- 238
W+ + E+ G LT ++ +++ + G AA F+ + N +TY
Sbjct: 795 WEYAETALERFTGKLTTTVVGKVL---QGVRNGDAALGFFD-WATSQEGYNHDTYTCNCL 850
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
++AL R K A V + P+ +I C+ G A Y L +E
Sbjct: 851 LQALLRLKRPKDALQVYRNKLCCS--PNMFTFTILIHGLCRAGDIGTA---YELLKEMPR 905
Query: 299 YP-PQSVVA--FLISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMK 352
+ PQ+V+ +I LC D ++L +M + S + +S+++ SL +
Sbjct: 906 HGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFT---YSTIVDSLVKSG 962
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT 412
V A L+ M+S+G P ++S++ KAG + A +L+ M G P++ TY
Sbjct: 963 KVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYN 1022
Query: 413 GLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
++ G+ G+++EA +L E + + VTY L+ +CK + + A+ L+ M +
Sbjct: 1023 TIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEK 1082
Query: 473 GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG-----LHLNGITRALIRAVK 524
G PN+ YN L+ C K + A +LL M KG + N + L +A K
Sbjct: 1083 GYVPNLFTYNSLLDMFCKKD-EVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATK 1138
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 65/359 (18%), Positives = 129/359 (35%), Gaps = 58/359 (16%)
Query: 183 IVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEAL 242
+++E+ K+ + N +I K + A+++F + G + TY I +L
Sbjct: 1215 LLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSL 1274
Query: 243 SRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQ 302
+ + D A +V E M++ G P + G +I FCK G +A + L K YP
Sbjct: 1275 CKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDV 1334
Query: 303 SVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLS 362
+ I L + ++ A ++L+ ++++++ C A L
Sbjct: 1335 VTFSIFIDWLSKRGR-LRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFE 1393
Query: 363 KMISEGPPPGNAVFNS-------------------------------------------- 378
M G P NA + +
Sbjct: 1394 VMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVE 1453
Query: 379 --------VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
++ + K G A ++ + M R +V ++ ++ Y Q E+A +
Sbjct: 1454 ADVRLGCAIVDMFGKCGSPQDARKVFEGMDQR----NVVLWSAMLGVYVFHKQEEQAFGL 1509
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL-KLLNEMKDVGVQPNVDEYNKLIQSL 488
VT+ +L+ C D A+ + ++ +D G++P VD ++ +I L
Sbjct: 1510 WRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLL 1568
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 1/138 (0%)
Query: 189 EKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
++ K V V + LI K G AF+VF + GC N TY I+ L +
Sbjct: 572 KEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKV 631
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
+ A + E M + PDS +I+ C + +EA V ++K P + L
Sbjct: 632 EQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTL 691
Query: 309 ISSLCQEDETVKLALDML 326
+ +L Q+ ++L +L
Sbjct: 692 LRAL-QKTNNLELVEQLL 708
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 152/328 (46%), Gaps = 5/328 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ LL +I + V++L + + G V LN LI F L + AF V
Sbjct: 71 NRLLTSIAKTKQYPTVFSLSNQMDSFGIPPD----VYTLNILINSFCHLNRPGFAFSVLA 126
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
K G + T+ I L A + +KMI G P+ G +I+ CK G
Sbjct: 127 KILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVG 186
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
A + + P V +I SLC+ D V A ++ G+ I +
Sbjct: 187 NTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCK-DRQVTEAFNLFSKMVGQGISPDIFTY 245
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+S+I SLC + + TLL++MI+ P +F++V+ A K G +T A +++ +M
Sbjct: 246 TSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMII 305
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
RG++P+V TY LM G+ +M+EA ++ + N + ++Y+TLI GYCK++ D
Sbjct: 306 RGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDK 365
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A L EM + PN YN L+ LC
Sbjct: 366 ATYLFEEMCQKELIPNTVTYNTLMHGLC 393
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 127/278 (45%), Gaps = 2/278 (0%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
+ ++++ K + +S+ +M G PD + +I+ FC + A V + +
Sbjct: 74 LTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGL 133
Query: 299 YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
P + LI LC E + + AL + D GE + + + ++I LC++ + + A
Sbjct: 134 QPDTATFTTLIRGLCVEGK-IGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAI 192
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
LL M P V+ S+I + K +T A + M +G+ PD++TYT L+
Sbjct: 193 RLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSL 252
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
N + + +LN+ + V + T++ CK + A +++ M GV+PNV
Sbjct: 253 CNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNV 312
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
YN L+ CL++ + A K+ + M G N I+
Sbjct: 313 VTYNALMDGHCLQS-EMDEAVKVFDTMVHNGYAPNVIS 349
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 154/358 (43%), Gaps = 11/358 (3%)
Query: 152 FFKWVTSGV------VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIA 205
F K V G+ +L+ ++C+ K V L + + K + V I + ++
Sbjct: 230 FSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMI----NSKIMPDVVIFSTVVD 285
Query: 206 LFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLP 265
K GK A +V + G N TY ++ + D A V + M+ G P
Sbjct: 286 ALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAP 345
Query: 266 DSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDM 325
+ +I+ +CK + +A ++ +K++ P L+ LC ++ A+ +
Sbjct: 346 NVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGR-LQDAIAL 404
Query: 326 LDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSK 385
+ + + + ++ LC+ + A LL + P ++ VI +
Sbjct: 405 FHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCR 464
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
AG++ A ++ + S+GL+P+V TYT +++G G ++EA ++ E N T
Sbjct: 465 AGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCT 524
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
Y+T+ +G + +E A++LL EM G +V L++ LC LD + L E
Sbjct: 525 YNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSE 582
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 85/176 (48%), Gaps = 7/176 (3%)
Query: 321 LALDMLDD-FSGEARKYAIKP------FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
L + LDD S R + P F+ ++ S+ + K +L ++M S G PP
Sbjct: 43 LNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDV 102
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
N +I+++ A +L + GL+PD T+T L+ G G++ +A + ++
Sbjct: 103 YTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDK 162
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + VTY TLI G CK+ + A++LL M+ QP+V Y +I SLC
Sbjct: 163 MIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLC 218
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 69/145 (47%), Gaps = 1/145 (0%)
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
++M+ PPP FN ++++ +K + M S G+ PDVYT L++ + +
Sbjct: 55 FNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCH 114
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
+ A +L + K + T+ TLIRG C + AL L ++M G QPNV
Sbjct: 115 LNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVT 174
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDM 505
Y LI LC K + A +LL M
Sbjct: 175 YGTLINGLC-KVGNTNAAIRLLRSM 198
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 153/314 (48%), Gaps = 2/314 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + GK +AA EV + GC N TY ++ L + FD A + +M + G
Sbjct: 50 LINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNG 109
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+PD +IS K G+ EA ++ RE+ P LI L + + K A
Sbjct: 110 CVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQK-A 168
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+++L++ + +SS+I L + + A L +M G P + F +++ A
Sbjct: 169 MELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDA 228
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
KAG + A+E+L M+ RG+KP V TY L++G+ G + EA +L+E K+N +
Sbjct: 229 LGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPD 288
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
VTY LI G K + D A ++L +M+ G P+ YN LI L KA A +L
Sbjct: 289 VVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLG-KAGLLNDAGRLF 347
Query: 503 EDMRLKGLHLNGIT 516
+ M+ KG + + +T
Sbjct: 348 DRMKSKGCNPDVVT 361
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 147/310 (47%), Gaps = 2/310 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI K+G+ + A E+ + +GC + TY I L + A+ + ++M
Sbjct: 153 NSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKR 212
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PDS ++ K G+ +A + +E+ + P LI+ + + V+
Sbjct: 213 RGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVE 272
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A ++LD+ K + +S +I L + + A +L KM EG PP +N++I
Sbjct: 273 -AYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLI 331
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ KAG + A + M+S+G PDV TY+ L++ ++E AC + E + +
Sbjct: 332 NGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQ 391
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
TY ++I K + D A +L +EM+ G+ P+V YN + SL + ++ A K
Sbjct: 392 PDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLG-RGGRFKEARK 450
Query: 501 LLEDMRLKGL 510
+ EDM+ GL
Sbjct: 451 IFEDMKESGL 460
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 139/340 (40%), Gaps = 56/340 (16%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+ A+ + + L D +KE G K GV+T N LIA F K+G A+ + ++
Sbjct: 224 ALMDALGKAGRVDDALELLDEMKERGVK-PGVVTY---NALIAGFGKVGDLVEAYNLLDE 279
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
GC + TY I L + D A V +KM + G PD+ +I+ K G
Sbjct: 280 MKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGL 339
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+A ++ + K P + +S
Sbjct: 340 LNDAGRLFDRMKSKGCNPD------------------------------------VVTYS 363
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
++I +L + V A L +M S G P + S+I+ KAG + A + MR +
Sbjct: 364 TLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGK 423
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
GL PDV TY ++ GG+ +EA +I + K++ TY L+ G K +E D A
Sbjct: 424 GLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDA 483
Query: 463 LKLLNEMKDVGVQ----------------PNVDEYNKLIQ 486
LL E+ + G NVDE ++L+Q
Sbjct: 484 CGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQ 523
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 131/295 (44%), Gaps = 5/295 (1%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI K G A +F++ GC + TY I AL + + A + E+M
Sbjct: 328 NTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMES 387
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD II+ K G+ +A +++ R K + P ++SL + K
Sbjct: 388 VGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGR-FK 446
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A + +D + + +++ L + K+V A LL ++I +G + F+ +
Sbjct: 447 EARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECL 506
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ G++ A E+L+ S+GL P +Y L+ A G++ EA L + K+ +
Sbjct: 507 EILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGK 566
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
V+Y +LI + + D A +LL EM G++ + Y+ L++ L DW
Sbjct: 567 PDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKL----QDW 617
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 128/257 (49%), Gaps = 3/257 (1%)
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALD 324
P+ +++ K G+ +EA +++ + K P + LI+SL + + + AL+
Sbjct: 7 PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKW-EAALE 65
Query: 325 MLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
++ + + K + +++++ L + A LL++M G P +N +IS
Sbjct: 66 VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLG 125
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV 444
KAG ++ A + MR RG PD +TY L+ G G+ ++A E+L E +++ +
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLED 504
TY +LI G K E A KL EMK G +P+ + L+ +L KA A +LL++
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALG-KAGRVDDALELLDE 244
Query: 505 MRLKGLHLNGIT-RALI 520
M+ +G+ +T ALI
Sbjct: 245 MKERGVKPGVVTYNALI 261
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 77/141 (54%), Gaps = 1/141 (0%)
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P P +NS+++A +KAG A + + +++ PDV +Y+ L++ G+ E A
Sbjct: 5 PSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAAL 64
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
E++ E + + + TY+TL+ K +FD AL+LL EM+D G P+V YN LI +L
Sbjct: 65 EVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTL 124
Query: 489 CLKALDWRTAEKLLEDMRLKG 509
KA A L +MR +G
Sbjct: 125 G-KAGRLSEAFTLFAEMRERG 144
>gi|356523437|ref|XP_003530345.1| PREDICTED: uncharacterized protein LOC100812426 [Glycine max]
Length = 633
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/156 (49%), Positives = 97/156 (62%), Gaps = 15/156 (9%)
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS-----GYANGGQMEEACEILNEAKK 436
YSK G+M +EM L S G +P VYTYT L S Y+NG MEEA +I EAKK
Sbjct: 65 TYSKVGEMGKPVEMTSLRESTGCRPHVYTYTVLASRPHVYAYSNGEDMEEAHKIFVEAKK 124
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
H +L + +H LI GYCKL +L +P+VDEY+KLIQSLCLKALDW
Sbjct: 125 KHVKLGHLMFHALIHGYCKL---SLGARLW-------CRPSVDEYDKLIQSLCLKALDWE 174
Query: 497 TAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIE 532
AEKL E+M+ GL L + R LIRAVKE++++ +E
Sbjct: 175 MAEKLHEEMKGSGLRLKCMMRGLIRAVKEMDKEVVE 210
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 165/327 (50%), Gaps = 3/327 (0%)
Query: 191 EKGVLTVEI-LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
E+G++ E+ L+ F + + + A E+ + V + + F ++ L +R D
Sbjct: 258 ERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHID 317
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A+ + + E G +P+ +I CK + +EA ++ + + P + A LI
Sbjct: 318 KAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILI 377
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
SLC+ + AL M D + + + P++S+I C+ + H A+ LL++M+ +G
Sbjct: 378 HSLCKRG-MMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGL 436
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
P A ++ +I+ + GD+ AME+ + M G+ +VYT+T L+SG+ G M+EA
Sbjct: 437 APSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAAR 496
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ ++ + + VT++ +I GYC++ A +L ++M D G+ P+ Y LI LC
Sbjct: 497 LFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLC 556
Query: 490 LKALDWRTAEKLLEDMRLKGLHLNGIT 516
L L A++ ++D+ + LN +
Sbjct: 557 L-TLGAMKAKEFVDDLENNCVVLNSFS 582
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 129/312 (41%), Gaps = 36/312 (11%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI K + + A +F + G N+ TY I +L +R + D A + ++M E
Sbjct: 339 NALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMRE 398
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G +I+ +C+ +A + EK + P + + LI+ LC++ +
Sbjct: 399 KGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLAS 458
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A+++ + + + F+++I C+ ++ A L KMI P FN +I
Sbjct: 459 -AMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMI 517
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTY----------------------------- 411
Y + G++ A ++ M RGL PD YTY
Sbjct: 518 EGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVV 577
Query: 412 ------TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
T LM G+ G++ E I +E + +L +++ ++ KL + + L
Sbjct: 578 LNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVL 637
Query: 466 LNEMKDVGVQPN 477
EMK+ GV+P+
Sbjct: 638 FREMKEKGVKPD 649
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 143/351 (40%), Gaps = 40/351 (11%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
V LI+ F K G A +F+K D V N+ T+ IE R A+ +
Sbjct: 474 NVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLY 533
Query: 256 EKMIETGSLPDSEKVGKIISWFCKG-GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
++M++ G PD+ +IS C G K V L + S+ L+ C+
Sbjct: 534 DQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTT-LMYGFCK 592
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
E + + D+ K + F+ ++ + ++ D L +M +G P N
Sbjct: 593 EGRLTE-TYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNV 651
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM-----SGY----------- 418
+I +SK ++ A+ M + G P+V TYT L+ SGY
Sbjct: 652 FHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEM 711
Query: 419 -------------------ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
AN G++E+A ++L+ + VT++TLI+G+CK +
Sbjct: 712 LVGRFLPNSFTYNCFLDFLANEGELEKA-KVLHATILEGCLANTVTFNTLIKGFCKAGQI 770
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
A+ L+ + G P+ Y+ +I LC K D A +L +M KGL
Sbjct: 771 QGAIDLMQNNTESGFFPDCISYSTIINELC-KVGDINKAFQLWNEMLYKGL 820
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 92/180 (51%), Gaps = 1/180 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+++ IR+ C ++++ GA+ LL++M S+G +N ++ + + A+E+ M
Sbjct: 198 YTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMV 257
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
RG+ D TY L+ G+ ++E A E+ ++ H S + ++ G K D
Sbjct: 258 ERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHID 317
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
A +L + ++G+ PN+ N LI LC K +R AE+L M +GL N +T A++
Sbjct: 318 KAFRLACHLGELGMVPNLFACNALIDKLC-KDRRFREAERLFRGMANRGLEPNEVTYAIL 376
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 137/342 (40%), Gaps = 6/342 (1%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
L+ ++C + ++D ++E G + +TV N LI + + A + N+
Sbjct: 376 LIHSLCKRGMMDDALCMFDRMREKGIR----VTVYPYNSLINGYCQHDNFHQARGLLNEM 431
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
+ G + +Y I L R+ A + +M G + +IS FCK G
Sbjct: 432 VEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNM 491
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
EA ++ + + P + +I C+ V+ A + D + S
Sbjct: 492 DEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVG-NVRKAFQLYDQMVDRGLTPDNYTYRS 550
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
+I LC AK + + + + +++ + K G +T + MR+RG
Sbjct: 551 LISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARG 610
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
+K D+ ++T ++ E+ + E K+ + V + +I + K E AL
Sbjct: 611 VKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQAL 670
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
++M G PNV Y LI LC K+ +A+ L E+M
Sbjct: 671 NCWDKMIADGCSPNVVTYTVLINHLC-KSGYLSSAQILCEEM 711
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 103/255 (40%), Gaps = 10/255 (3%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFS--KLGKGKAAFEVF 220
L+ C E Y +WD ++ G K +++++ + +++ KL G+ +F
Sbjct: 585 TLMYGFCKEGRLTETYHIWDEMRARGVK------LDLISFTVIVYAALKLHDGEKISVLF 638
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ + G + + I+ S+ + A + +KMI G P+ +I+ CK
Sbjct: 639 REMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKS 698
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
G A ++ + P + L E E K + G
Sbjct: 699 GYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATILEGCLANTV--T 756
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F+++I+ C+ + GA L+ G P ++++I+ K GD+ A ++ M
Sbjct: 757 FNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEML 816
Query: 401 SRGLKPDVYTYTGLM 415
+GLKPD+ Y L+
Sbjct: 817 YKGLKPDIVAYNILI 831
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 77/173 (44%), Gaps = 1/173 (0%)
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
P++ ++ LCR V A + + M+ G + +++ + + ++ A+EM M
Sbjct: 232 PYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDM 291
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
S P V + + ++ G G +++A + + + + LI CK F
Sbjct: 292 LSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRF 351
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
A +L M + G++PN Y LI SLC + + A + + MR KG+ +
Sbjct: 352 REAERLFRGMANRGLEPNEVTYAILIHSLCKRGM-MDDALCMFDRMREKGIRV 403
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%)
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
S+Y + A ++L+L S G+ YT + ++ Q A ++ +E +
Sbjct: 133 SSYLRLRRARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFP 192
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
L Y IR YC++ D A LL M+ GV+ + YN L+ LC
Sbjct: 193 LDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLC 241
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 139/293 (47%), Gaps = 1/293 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V LN LI F L + AF V K G + T+ I L A + +
Sbjct: 91 VYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFD 150
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
KMI+ G P+ G +I+ CK G A + + P + +I SLC+ D
Sbjct: 151 KMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCK-D 209
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
V A ++ G+ I ++S++ +LC + + TLL++M++ P +F
Sbjct: 210 RQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIF 269
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
++V+ A K G +T A E++ +M RG++PDV TYT LM G+ +M+EA ++ + +
Sbjct: 270 STVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVR 329
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
++Y TLI GYCK+ + D A+ L EM P+ YN L+ LC
Sbjct: 330 KGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLC 382
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 143/332 (43%), Gaps = 5/332 (1%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L+ A+C+ K V L + + K + V I + ++ K GK A E+ +
Sbjct: 236 SLVHALCNLCEWKHVTTLLNQMV----NSKILPDVVIFSTVVDALCKEGKVTEAHEIVDM 291
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + TY ++ + D A V + M+ G PD +I+ +CK K
Sbjct: 292 MIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHK 351
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+A ++ K+ P L+ LC ++ A+ + + + + +S
Sbjct: 352 IDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGR-LQDAIALFHEMVARGQMPDLVTYS 410
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
++ SLC+ + A LL + + P V+N +I +AG++ A ++ + S+
Sbjct: 411 ILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSK 470
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
GL P V+TY ++ G G + EA ++ E N TY+T+ RG+ + E A
Sbjct: 471 GLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRA 530
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
++LL EM G +V L++ L LD
Sbjct: 531 IQLLEEMLARGFSADVSTTTLLVEMLSDDGLD 562
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%)
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+I F+ ++ S+ +MK +L ++M S G PP N +I+++ + A +L
Sbjct: 55 SIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVL 114
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
+ G +PD T+T L+ G G++ EA + ++ + + VTY TLI G CK+
Sbjct: 115 AKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKV 174
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A++LL M+ QP+V Y +I SLC
Sbjct: 175 GNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLC 207
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 6/171 (3%)
Query: 340 PFSSVIRSLCRMKDVH-----GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
PF S ++ K +H A + ++++ PPP F ++++ +K + +
Sbjct: 18 PFFSSSQNNFHSKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLS 77
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+ M S G+ P+VYT L++ + + ++ A +L + K + P T+ TLIRG C
Sbjct: 78 LSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLC 137
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
+ AL L ++M D G QPNV Y LI LC K + A +LL M
Sbjct: 138 VEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLC-KVGNTSAAIRLLRSM 187
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 163/355 (45%), Gaps = 12/355 (3%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVL-TVEILNELIALFSKLGKGKA 215
S +VD L K K + + +D+V ++ K+ GV ++ + N LI K GK
Sbjct: 323 VSNLVDGLRK-------KGNIGSAFDLVNKV--KKFGVAPSLFVYNALINSMCKDGKLDE 373
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A +FN G G N TY I++ +R D A KM E G +IS
Sbjct: 374 AESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLIS 433
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
CK GK + A ++ + P + LIS C+E E + A + + +G+
Sbjct: 434 GHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGE-LHNAFRLYHEMTGKGIS 492
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
F+++I LC + A L +M+ P +N +I + K G+ A E+
Sbjct: 493 PNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFEL 552
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
L M +GL PD YTY L+SG + G++ EA E +N+ + +L+ + + L+ GYCK
Sbjct: 553 LDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCK 612
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
D AL EM GV ++ Y+ LI + L+ D R+ LL+ M +GL
Sbjct: 613 EGRLDDALDACREMLGRGVAMDLVCYSVLIYGI-LRQQDRRSIIDLLKQMHDQGL 666
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 145/287 (50%), Gaps = 1/287 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
L+ K+ + +A E+ N+ ++G V ++ ++ L ++ A+ + K+ + G
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P +I+ CK GK EA ++ K ++P + LI S C+ + + +A
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGK-LDVA 409
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
L L + K + P+SS+I C++ + AK+L +MI+ G P ++ S+IS
Sbjct: 410 LHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISG 469
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y K G++ A + M +G+ P+ YT+T L+SG + +M EA ++ E + + +
Sbjct: 470 YCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPN 529
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
VTY+ LI G+CK A +LL+EM + G+ P+ Y LI LC
Sbjct: 530 EVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLC 576
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 142/341 (41%), Gaps = 39/341 (11%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+LN LI ++ + + A +F++ G + Y + +L K F A V +M
Sbjct: 186 VLNGLI----RIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRM 241
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE- 317
+G I CK + EA + L K + L+ LC+ +E
Sbjct: 242 ESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEF 301
Query: 318 --------------------TVKLALDMLD---------DFSGEARKYAIKP----FSSV 344
V +D L D + +K+ + P ++++
Sbjct: 302 EAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNAL 361
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
I S+C+ + A++L + M +G P + ++ +I ++ K G + A+ L M G+
Sbjct: 362 INSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGI 421
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
K VY Y+ L+SG+ G++ A + +E N + + V Y +LI GYCK E A +
Sbjct: 422 KATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFR 481
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
L +EM G+ PN + LI LC A A KL +M
Sbjct: 482 LYHEMTGKGISPNTYTFTALISGLC-HANRMAEANKLFGEM 521
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 138/293 (47%), Gaps = 10/293 (3%)
Query: 225 DYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAK 284
D G + T + L R + F A + ++++ +G PD ++ C+
Sbjct: 173 DCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFI 232
Query: 285 EAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
A V + R + SV + I LC+ ++ V A+++ + S + + + +
Sbjct: 233 RAREV--IGRMESSGCDLSVATYNVFIRGLCK-NQRVWEAVEIKNLLSYKGLRADVGTYC 289
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+++ LC++++ + ++++MI G P A ++++ K G++ A +++ ++
Sbjct: 290 TLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKF 349
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFD 460
G+ P ++ Y L++ G+++EA + N H L P VTY LI +CK + D
Sbjct: 350 GVAPSLFVYNALINSMCKDGKLDEAESLFNNM--GHKGLFPNDVTYSILIDSFCKRGKLD 407
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
AL L +M +VG++ V Y+ LI C K R A+ L ++M GL N
Sbjct: 408 VALHFLGKMTEVGIKATVYPYSSLISGHC-KLGKLRAAKSLFDEMIANGLKPN 459
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 117/289 (40%), Gaps = 43/289 (14%)
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
++ ++ + D G + Y I+A ++ A+ + + M+ G LP+ +
Sbjct: 652 RSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTAL 711
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFS 330
I+ CK G +A ++ P Q+ A + L E ++ ++L +L+ F
Sbjct: 712 INGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFL 771
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
Y I +IR C++ + A +L MI G P ++++I Y + GD+
Sbjct: 772 ANTVTYNI-----LIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLK 826
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A+++ + M +RG+ PD V Y+ LI
Sbjct: 827 EAIKLWESMLNRGVNPDT-----------------------------------VAYNFLI 851
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
G C E A +L ++M GV+PN YN LI CL + TA+
Sbjct: 852 YGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTAD 900
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 76/165 (46%), Gaps = 4/165 (2%)
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
F+ +I Y + + +++LM G+ P + T +G+++G Q A + +E
Sbjct: 148 FDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIV 207
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+ R Y ++R C+L++F A +++ M+ G +V YN I+ LC W
Sbjct: 208 SSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVW 267
Query: 496 RTAEKLLEDMRLKGLHLN-GITRALIRAVKELEEDAIENGEALVE 539
E + + KGL + G L+ + ++EE E GE ++
Sbjct: 268 EAVE-IKNLLSYKGLRADVGTYCTLVLGLCKVEE--FEAGEEMMN 309
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 139/294 (47%), Gaps = 1/294 (0%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
V LN LI F L + AF V K G + T+ I L A +
Sbjct: 99 NVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLF 158
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+KMI+ G P+ G +I+ CK G A + + P + +I SLC+
Sbjct: 159 DKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCK- 217
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
D V A ++ G+ I ++S++ +LC + + TLL++M++ P +
Sbjct: 218 DRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVI 277
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
F++V+ A K G +T A E++ +M RG++PDV TYT LM G+ +M+EA ++ +
Sbjct: 278 FSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMV 337
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ ++Y TLI GYCK+ + D A+ L EM P+ YN L+ LC
Sbjct: 338 RKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLC 391
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 148/348 (42%), Gaps = 23/348 (6%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V I +I K + AF +F++ G + TY + AL + ++
Sbjct: 205 VVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLN 264
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE- 315
+M+ + LPD ++ CK GK EAH + + ++ + P L+ C +
Sbjct: 265 QMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQS 324
Query: 316 --DETVKLALDML--DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
DE VK+ DM+ F+ + Y +++I C++ + A L +M + P
Sbjct: 325 EMDEAVKV-FDMMVRKGFAPDVISY-----TTLINGYCKIHKIDKAMYLFEEMCRKEWIP 378
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+N+++ G + A+ + M +RG PD+ TY+ L+ +EEA +L
Sbjct: 379 DTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALL 438
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
+ ++ Y+ +I G C+ E + A L + + G+ P+V YN +I LC +
Sbjct: 439 KAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKR 498
Query: 492 ALDWRTAEKLLEDM-----RLKGLHLNGITRAL------IRAVKELEE 528
L A KL +M G N I R +RA++ LEE
Sbjct: 499 GLL-NEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEE 545
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 135/307 (43%), Gaps = 5/307 (1%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L+ A+C+ K V L + + K + V I + ++ K GK A E+ +
Sbjct: 245 SLVHALCNLCEWKHVTTLLNQMV----NSKILPDVVIFSTVVDALCKEGKVTEAHEIVDM 300
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + TY ++ + D A V + M+ G PD +I+ +CK K
Sbjct: 301 MIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHK 360
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+A ++ K+ P L+ LC ++ A+ + + + + +S
Sbjct: 361 IDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGR-LQDAIALFHEMVARGQMPDLVTYS 419
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
++ SLC+ + + A LL + + P V+N +I +AG++ A ++ + S+
Sbjct: 420 ILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSK 479
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
GL P V+TY ++ G G + EA ++ E N TY+T+ RG+ + E A
Sbjct: 480 GLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRA 539
Query: 463 LKLLNEM 469
++LL EM
Sbjct: 540 IQLLEEM 546
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%)
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+I F+ ++ S+ +MK +L ++M S G PP N +I+++ + A +L
Sbjct: 64 SIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVL 123
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
+ G +PD T+T L+ G G++ EA + ++ + + VTY TLI G CK+
Sbjct: 124 AKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKV 183
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A++LL M+ QP+V Y +I SLC
Sbjct: 184 GNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLC 216
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 6/171 (3%)
Query: 340 PFSSVIRSLCRMKDVH-----GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
PF S ++ K +H A + ++++ PPP F ++++ +K + +
Sbjct: 27 PFFSSSQNNFHSKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLS 86
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+ M S G+ P+VYT L++ + + ++ A +L + K + P T+ TLIRG C
Sbjct: 87 LSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLC 146
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
+ AL L ++M D G QPNV Y LI LC K + A +LL M
Sbjct: 147 VEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLC-KVGNTSAAIRLLRSM 196
>gi|356506930|ref|XP_003522226.1| PREDICTED: uncharacterized protein LOC100806474 [Glycine max]
Length = 330
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/128 (56%), Positives = 92/128 (71%), Gaps = 2/128 (1%)
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
+T L + Y+NGG MEE +IL EAKK H +L V +HTLI GYCKLE+F ALKL +
Sbjct: 14 FTVLANTYSNGGDMEEPHKILAEAKKKHVKLRHVIFHTLIHGYCKLEQFHEALKLSAGAR 73
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDA 530
+ +P+VDEY+KLIQSLCLKALDW AEKL E M+ GL L GI R LIR VKE++++
Sbjct: 74 -LWCRPSVDEYDKLIQSLCLKALDWEMAEKLQEKMKGSGLRLKGIMRGLIRVVKEMDKEV 132
Query: 531 IENGEALV 538
+E E++V
Sbjct: 133 VE-AESIV 139
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 145/287 (50%), Gaps = 1/287 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
L+ K+ + +A E+ N+ ++G V ++ ++ L ++ A+ + K+ + G
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P +I+ CK GK EA ++ K ++P + LI S C+ + + +A
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGK-LDVA 409
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
L L + K + P+SS+I C++ + AK+L +MI+ G P ++ S+IS
Sbjct: 410 LHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISG 469
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y K G++ A + M +G+ P+ YT+T L+SG + +M EA ++ E + + +
Sbjct: 470 YCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPN 529
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
VTY+ LI G+CK A +LL+EM + G+ P+ Y LI LC
Sbjct: 530 EVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLC 576
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 169/386 (43%), Gaps = 34/386 (8%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVL-TVEILNELIALFSKLGKGKA 215
S +VD L K K + + +D+V ++ K+ GV ++ + N LI K GK
Sbjct: 323 VSNLVDGLRK-------KGNIGSAFDLVNKV--KKFGVAPSLFVYNALINSMCKDGKLDE 373
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A +FN G G N TY I++ +R D A KM E G +IS
Sbjct: 374 AESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLIS 433
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
CK GK + A ++ + P + LIS C+E E + A + + +G+
Sbjct: 434 GHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGE-LHNAFRLYHEMTGKGIS 492
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
F+++I LC + A L +M+ P +N +I + K G+ A E+
Sbjct: 493 PNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFEL 552
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--------VTYH 447
L M +GL PD YTY L+SG + G++ EA E +N+ + +L+ VTY
Sbjct: 553 LDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYT 612
Query: 448 TLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE---- 503
LI G CK+ D A L EM PN + Y C LD+ T+E +E
Sbjct: 613 ALINGLCKIGLMDKAELLCREMLASNSLPNQNTY------ACF--LDYLTSEGNIEKAIQ 664
Query: 504 --DMRLKGLHLNGIT-RALIRAVKEL 526
D+ L+G N +T LIR +L
Sbjct: 665 LHDVLLEGFLANTVTYNILIRGFCKL 690
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 154/362 (42%), Gaps = 17/362 (4%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNEL--------IALFSKLGKGKA 215
L I SS + +VY +V+ + E + + E++ + +A ++ +G
Sbjct: 202 LFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLC 261
Query: 216 -------AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSE 268
A E+ N G A+ TY + L + + F+ + +MIE G +P
Sbjct: 262 KNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEA 321
Query: 269 KVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDD 328
V ++ K G A + ++ + P V LI+S+C+ D + A + ++
Sbjct: 322 AVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCK-DGKLDEAESLFNN 380
Query: 329 FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD 388
+ +S +I S C+ + A L KM G ++S+IS + K G
Sbjct: 381 MGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGK 440
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHT 448
+ A + M + GLKP+V YT L+SGY G++ A + +E + T+
Sbjct: 441 LRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTA 500
Query: 449 LIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLK 508
LI G C A KL EM + V PN YN LI+ C + R E LL++M K
Sbjct: 501 LISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFE-LLDEMVEK 559
Query: 509 GL 510
GL
Sbjct: 560 GL 561
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 142/341 (41%), Gaps = 39/341 (11%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+LN LI ++ + + A +F++ G + Y + +L K F A V +M
Sbjct: 186 VLNGLI----RIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRM 241
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE- 317
+G I CK + EA + L K + L+ LC+ +E
Sbjct: 242 ESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEF 301
Query: 318 --------------------TVKLALDMLD---------DFSGEARKYAIKP----FSSV 344
V +D L D + +K+ + P ++++
Sbjct: 302 EAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNAL 361
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
I S+C+ + A++L + M +G P + ++ +I ++ K G + A+ L M G+
Sbjct: 362 INSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGI 421
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
K VY Y+ L+SG+ G++ A + +E N + + V Y +LI GYCK E A +
Sbjct: 422 KATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFR 481
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
L +EM G+ PN + LI LC A A KL +M
Sbjct: 482 LYHEMTGKGISPNTYTFTALISGLC-HANRMAEANKLFGEM 521
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 138/293 (47%), Gaps = 10/293 (3%)
Query: 225 DYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAK 284
D G + T + L R + F A + ++++ +G PD ++ C+
Sbjct: 173 DCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFI 232
Query: 285 EAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
A V + R + SV + I LC+ ++ V A+++ + S + + + +
Sbjct: 233 RAREV--IGRMESSGCDLSVATYNVFIRGLCK-NQRVWEAVEIKNLLSYKGLRADVGTYC 289
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+++ LC++++ + ++++MI G P A ++++ K G++ A +++ ++
Sbjct: 290 TLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKF 349
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFD 460
G+ P ++ Y L++ G+++EA + N H L P VTY LI +CK + D
Sbjct: 350 GVAPSLFVYNALINSMCKDGKLDEAESLFNNM--GHKGLFPNDVTYSILIDSFCKRGKLD 407
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
AL L +M +VG++ V Y+ LI C K R A+ L ++M GL N
Sbjct: 408 VALHFLGKMTEVGIKATVYPYSSLISGHC-KLGKLRAAKSLFDEMIANGLKPN 459
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 136/346 (39%), Gaps = 43/346 (12%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
V I LI+ + K G+ AF ++++ G N T+ I L A +
Sbjct: 459 NVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLF 518
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+M+E +P+ +I CK G A + EK + P LIS LC
Sbjct: 519 GEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCST 578
Query: 316 DETVKLALDMLDDFSGEARKYA--------IKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
V A + ++D GE +K + ++++I LC++ + A+ L +M++
Sbjct: 579 GR-VSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLAS 637
Query: 368 GPPP---------------GN-------------------AVFNSVISAYSKAGDMTPAM 393
P GN +N +I + K G + A
Sbjct: 638 NSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAA 697
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
E+L M G+ PD +Y+ ++ Y G ++EA ++ V Y+ LI G
Sbjct: 698 EVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGC 757
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
C E A +L ++M GV+PN YN LI CL + TA+
Sbjct: 758 CVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTAD 803
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 76/165 (46%), Gaps = 4/165 (2%)
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
F+ +I Y + + +++LM G+ P + T +G+++G Q A + +E
Sbjct: 148 FDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIV 207
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+ R Y ++R C+L++F A +++ M+ G +V YN I+ LC W
Sbjct: 208 SSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVW 267
Query: 496 RTAEKLLEDMRLKGLHLN-GITRALIRAVKELEEDAIENGEALVE 539
E + + KGL + G L+ + ++EE E GE ++
Sbjct: 268 EAVE-IKNLLSYKGLRADVGTYCTLVLGLCKVEE--FEAGEEMMN 309
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 152/328 (46%), Gaps = 3/328 (0%)
Query: 190 KEKGVLTVE-ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
K+KG + E N LI F K+ K A+ + + + G N TY I R+
Sbjct: 34 KKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKV 93
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
D A+ + +M+E G +P+ ++S C+ G EA+ + RE+ + P + L
Sbjct: 94 DTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTL 153
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
++ LC+ + + +AL + +D S + +S++I LC+ + A L KM
Sbjct: 154 MAGLCKTGK-IDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENS 212
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P F +++ K + A ++L+ M R P+V TY+ L+ G GQ+ +A
Sbjct: 213 CEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQ 272
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
E+ + VTY++LI G+C D AL L+ EM G P++ YN LI L
Sbjct: 273 EVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGL 332
Query: 489 CLKALDWRTAEKLLEDMRLKGLHLNGIT 516
C K A +L DM+ K + + IT
Sbjct: 333 C-KTGRAPEANRLFGDMKAKFCNPDVIT 359
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 165/368 (44%), Gaps = 8/368 (2%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+ +C +E V E E V + LI K G+ + A EVF +
Sbjct: 222 ALMDGLCKGDRLQEAQQ----VLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKR 277
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G N TY I D A + E+M TG LPD +I CK G+
Sbjct: 278 MIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGR 337
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
A EA+ ++ + K P + LI C+ E + +A + DD +A + FS
Sbjct: 338 APEANRLFGDMKAKFCNPDVITYSCLIGGFCKL-ERIDMARTLFDDMLKQAVLPDVVTFS 396
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+++ C V A+ LL +M++ P + S++ + K G M A +LK M R
Sbjct: 397 TLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKR 456
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G +P+V TYT L+ + G+ A ++L E N + + +TY +LI G+C + + A
Sbjct: 457 GCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEA 516
Query: 463 LKLLNEM-KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL-HLNGITRALI 520
K+L + +D + ++ Y ++ LC + A +LLE ++ G + I ALI
Sbjct: 517 RKMLERLERDENCKADMFAYRVMMDGLC-RTGRMSAALELLEAIKQSGTPPRHDIYVALI 575
Query: 521 RAVKELEE 528
R + + +E
Sbjct: 576 RGLCQGKE 583
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 121/262 (46%), Gaps = 10/262 (3%)
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
CEK + T ++ +I CK + EA + ++K P + LI+ C+
Sbjct: 3 CEKNVITWTI--------MIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCK 54
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
+ V A +L + + +S+VI CR V A L +M+ G P
Sbjct: 55 VHK-VHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLV 113
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
+N+++S + G M A E+L MR RGL+PD ++Y LM+G G+++ A ++ +
Sbjct: 114 TYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDN 173
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
V Y TLI G CK D A KL +M++ +P+V + L+ LC K
Sbjct: 174 SNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLC-KGDR 232
Query: 495 WRTAEKLLEDMRLKGLHLNGIT 516
+ A+++LE M + N IT
Sbjct: 233 LQEAQQVLETMEDRNCTPNVIT 254
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 153/321 (47%), Gaps = 3/321 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V N LI + + + A + YG V +++T+ ++ D A + E
Sbjct: 189 VSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIRE 248
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEA-HVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+M+E G + V I+ FCK G+ ++A + + ++ + +P Q L++ LC+
Sbjct: 249 QMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKA 308
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
VK A++++D E + ++SVI LC++ +V A +L +MI+ P
Sbjct: 309 GH-VKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVT 367
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N++IS K + A E+ +++ S+G+ PDV T+ L+ G A E+ E +
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
TY+ LI C + D AL +L +M+ G +V YN LI C KA
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFC-KANKT 486
Query: 496 RTAEKLLEDMRLKGLHLNGIT 516
R AE++ ++M + G+ N +T
Sbjct: 487 REAEEIFDEMEVHGVSRNSVT 507
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 146/329 (44%), Gaps = 9/329 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ +C + K + D++ + G V N +I+ KLG+ K A EV +
Sbjct: 299 NTLVNGLCKAGHVKHAIEIMDVMLQEGYDPD----VYTYNSVISGLCKLGEVKEAVEVLD 354
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ C N TY I L + + A + + G LPD +I C
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLD--DFSGEARKYAIK 339
+ A ++ R K P + LI SLC + + + AL+ML + SG AR ++
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGK-LDEALNMLKQMELSGCAR--SVI 471
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
++++I C+ A+ + +M G + +N++I K+ + A +++ M
Sbjct: 472 TYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
G KPD YTY L++ + GG +++A +I+ N VTY TLI G CK
Sbjct: 532 IMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRV 591
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ A KLL ++ G+ YN +IQ L
Sbjct: 592 EVASKLLRSIQMKGINLTPHAYNPVIQGL 620
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 148/318 (46%), Gaps = 3/318 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDY-GCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+N ++ F K G+ + A + + G +Q T+ + L + A + + M
Sbjct: 262 VNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVM 321
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
++ G PD +IS CK G+ KEA V + P LIS+LC+E++
Sbjct: 322 LQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ- 380
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
V+ A ++ + + + F+S+I+ LC ++ A L +M S+G P +N
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I + G + A+ MLK M G V TY L+ G+ + EA EI +E + +
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
+ VTY+TLI G CK + A +L+++M G +P+ YN L+ C + D + A
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFC-RGGDIKKA 559
Query: 499 EKLLEDMRLKGLHLNGIT 516
+++ M G + +T
Sbjct: 560 ADIVQAMTSNGCEPDIVT 577
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 16/215 (7%)
Query: 303 SVVAFLISSLCQ---EDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVH 355
S LI S Q +DE + + M+D+F +KP ++ ++ L +
Sbjct: 119 STFLILIESYAQFELQDEILSVVDWMIDEF-------GLKPDTHFYNRMLNLLVDGNSLK 171
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
+ +KM G P + FN +I A +A + PA+ ML+ M S GL PD T+T +M
Sbjct: 172 LVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVM 231
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV-GV 474
GY G ++ A I + + S V+ + ++ G+CK + AL + EM + G
Sbjct: 232 QGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGF 291
Query: 475 QPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
P+ +N L+ LC KA + A ++++ M +G
Sbjct: 292 FPDQYTFNTLVNGLC-KAGHVKHAIEIMDVMLQEG 325
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 150/325 (46%), Gaps = 5/325 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ LL +I + V++L + + G V LN LI F L + AF V
Sbjct: 73 NRLLTSIAKTKQYPTVFSLSNQMDSFGIPPD----VYTLNILINSFCHLNRLGFAFSVLA 128
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
K G + T+ I L A + +KMI G P+ G +I+ CK G
Sbjct: 129 KILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVG 188
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
A + + P V +I SLC+ D V A ++ G+ I +
Sbjct: 189 NTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCK-DRQVTEAFNLFSKMVGQGISPDIFTY 247
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+S+I SLC + + TLL++MI+ P +F++V+ A K G +T A +++ +M
Sbjct: 248 TSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMII 307
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
RG++P+V TY LM G+ +M+EA ++ + N + ++Y+TLI GYCK++ D
Sbjct: 308 RGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDK 367
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQ 486
A L EM + PN YN L+
Sbjct: 368 ATYLFEEMCQKELIPNTVTYNTLMH 392
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 126/278 (45%), Gaps = 2/278 (0%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
+ ++++ K + +S+ +M G PD + +I+ FC + A V +
Sbjct: 76 LTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGH 135
Query: 299 YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
P + LI LC E + + AL + D GE + + + ++I LC++ + + A
Sbjct: 136 QPDTATFTTLIRGLCVEGK-IGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAI 194
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
LL M P V+ S+I + K +T A + M +G+ PD++TYT L+
Sbjct: 195 RLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSL 254
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
N + + +LN+ + V + T++ CK + A +++ M GV+PNV
Sbjct: 255 CNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNV 314
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
YN L+ CL++ + A K+ + M G N I+
Sbjct: 315 VTYNALMDGHCLQS-EMDEAVKVFDTMVHNGYAPNVIS 351
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 154/358 (43%), Gaps = 12/358 (3%)
Query: 152 FFKWVTSGV------VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIA 205
F K V G+ +L+ ++C+ K V L + + K + V I + ++
Sbjct: 232 FSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMI----NSKIMPDVVIFSTVVD 287
Query: 206 LFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLP 265
K GK A +V + G N TY ++ + D A V + M+ G P
Sbjct: 288 ALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAP 347
Query: 266 DSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDM 325
+ +I+ +CK + +A ++ +K++ P +V + C ++ A+ +
Sbjct: 348 NVISYNTLINGYCKIQRMDKATYLFEEMCQKELIP-NTVTYNTLMHXCHVGR-LQDAIAL 405
Query: 326 LDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSK 385
+ + + + ++ LC+ + A LL + P ++ VI +
Sbjct: 406 FHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCR 465
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
AG++ A ++ + S+GL+P+V TYT +++G G ++EA ++ E N T
Sbjct: 466 AGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCT 525
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
Y+T+ +G + +E A++LL EM G +V L++ LC LD + L E
Sbjct: 526 YNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSE 583
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 1/145 (0%)
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
++M+ PPP FN ++++ +K + M S G+ PDVYT L++ + +
Sbjct: 57 FNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCH 116
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
++ A +L + K + T+ TLIRG C + AL L ++M G QPNV
Sbjct: 117 LNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVT 176
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDM 505
Y LI LC K + A +LL M
Sbjct: 177 YGTLINGLC-KVGNTNAAIRLLRSM 200
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 7/176 (3%)
Query: 321 LALDMLDD-FSGEARKYAIKP------FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
L + LDD S R + P F+ ++ S+ + K +L ++M S G PP
Sbjct: 45 LNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDV 104
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
N +I+++ + A +L + G +PD T+T L+ G G++ +A + ++
Sbjct: 105 YTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDK 164
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + VTY TLI G CK+ + A++LL M+ QP+V Y +I SLC
Sbjct: 165 MIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLC 220
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 172/364 (47%), Gaps = 11/364 (3%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA 216
SG+++ L+K +G E ++++ ++G K V + + N +I K GK + A
Sbjct: 333 VSGLIEGLIK-----MGSIE--GAFELLNKVG-KLGVVPNLFVYNSMINSLCKTGKLEEA 384
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
+F+ + G N TY I+ RR D A+ KMIE G +I+
Sbjct: 385 ELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINC 444
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
CK GK K A +++ +K + P + LIS C+ D V A + + +G+
Sbjct: 445 QCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCK-DGLVPKAFKLYHEMTGKGIAP 503
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
F+++I LC++ + A L +M+ P +N +I + + G+ T A E+L
Sbjct: 504 NTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELL 563
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
M +GL PD YTY L++G + G++ EA E +N+ H RL + Y L++G+CK
Sbjct: 564 DEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKE 623
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
AL EM G+Q ++ Y LI S L D R +LL +M KG+ + +
Sbjct: 624 GRIKEALVARQEMVGRGLQMDLVSYAVLI-SGALNQND-RILFELLREMHGKGMQPDNVI 681
Query: 517 RALI 520
++
Sbjct: 682 YTIL 685
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 154/343 (44%), Gaps = 4/343 (1%)
Query: 190 KEKGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
++ G+L V L+ L+ +++ K + E+F+ + G + Y ++ L K F
Sbjct: 182 RDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDF 241
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
+ A + + G I+ CK + EA V EK + L
Sbjct: 242 NKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTL 301
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
+ LC+ E ++ ++M+D+ + S +I L +M + GA LL+K+ G
Sbjct: 302 VLGLCRIQE-FEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLG 360
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P V+NS+I++ K G + A + +M RGL P+ TYT L+ G+ +++ A
Sbjct: 361 VVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAF 420
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
N+ + + +Y+++I CK + A L EM D G++P V Y LI
Sbjct: 421 YYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGY 480
Query: 489 CLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAVKELEEDA 530
C L + A KL +M KG+ N +T ALI + ++ + A
Sbjct: 481 CKDGLVPK-AFKLYHEMTGKGIAPNTVTFTALICGLCQINKMA 522
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 125/292 (42%), Gaps = 2/292 (0%)
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
V N DYG + T + AL+R + F + + ++ G PD ++ C
Sbjct: 177 VVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLC 236
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
+ +A + A I+ LC+ + A+++ + K +
Sbjct: 237 ELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWE-AVEVKRSLGEKGLKADL 295
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
+ +++ LCR+++ ++ +MI G P A + +I K G + A E+L
Sbjct: 296 VTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNK 355
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
+ G+ P+++ Y +++ G++EEA + + + + VTY LI G+ + +
Sbjct: 356 VGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAK 415
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
D A N+M + G+ V YN +I C K + AE L ++M KGL
Sbjct: 416 LDVAFYYFNKMIECGISATVYSYNSMINCQC-KFGKMKMAELLFKEMVDKGL 466
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 98/240 (40%), Gaps = 8/240 (3%)
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
+ FE+ + G + Y I+ + A+ MI G +P+S +
Sbjct: 661 RILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTAL 720
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFS 330
++ K G EA +++ + P + L +E + ++L ML
Sbjct: 721 VNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSF 780
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
Y I +IR C++ A LL MI G P +++ I Y K G++
Sbjct: 781 ANTVTYNI-----LIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVD 835
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
AM+M + M RGLKPD + L+ G+++ A ++ N+ + + TYH+L+
Sbjct: 836 AAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLM 895
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 92/225 (40%), Gaps = 2/225 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F K G K AFE + G V N TY + L + + A + ++M+
Sbjct: 685 LIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGE 744
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
++P+ G + K G + A ++ A + + LI CQ + + A
Sbjct: 745 AIPNHITYGCFLDHLTKEGNMENALQLHN-AMLQGSFANTVTYNILIRGYCQIGK-FQEA 802
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+LD G +S+ I C+ +V A + M+ G P VFN +I A
Sbjct: 803 AKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHA 862
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G++ A+++ M RGLKP TY LM A ++ +
Sbjct: 863 CCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQV 907
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 100/241 (41%), Gaps = 2/241 (0%)
Query: 252 WSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISS 311
+ + +M G PD+ +I F K G K+A + + + P L++
Sbjct: 664 FELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNG 723
Query: 312 LCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
L + + L GEA I + + L + ++ A L + M+ +G
Sbjct: 724 LFKAGYVNEAKLLFKRMLVGEAIPNHI-TYGCFLDHLTKEGNMENALQLHNAML-QGSFA 781
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+N +I Y + G A ++L +M G+ PD TY+ + Y G ++ A ++
Sbjct: 782 NTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMW 841
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
+ + V ++ LI C E D AL+L N+M G++P Y+ L+ L +
Sbjct: 842 ECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQR 901
Query: 492 A 492
A
Sbjct: 902 A 902
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 89/185 (48%), Gaps = 4/185 (2%)
Query: 324 DMLDDFSGEARKYAIKP---FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
+ ++F +KY F +I+ + K V +++ M G P ++++
Sbjct: 138 QIFENFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALL 197
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+A ++ +E+ + + G+KPD Y YT ++ +A EI+N+A+ N
Sbjct: 198 NALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCS 257
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
LS VTY+ I G CK + A+++ + + G++ ++ Y L+ LC + ++ +
Sbjct: 258 LSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLC-RIQEFEVGME 316
Query: 501 LLEDM 505
++++M
Sbjct: 317 MMDEM 321
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 147/311 (47%), Gaps = 5/311 (1%)
Query: 206 LFSKLGKGKAAFEV---FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+ S L K K V F +F G N T I +A+SV +++ G
Sbjct: 99 ILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVFANILKRG 158
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD+ + +I C G+ K A + + Q LI+ LC+ ET +A
Sbjct: 159 YHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVA 218
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+L G + K + ++++I LC+ K V A L S+MI +G P +N++I
Sbjct: 219 -RLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYG 277
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ G++ A +L M+ + + PDVYT+ L+ G+++EA + E K + +
Sbjct: 278 FCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPN 337
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
VTY +LI G CK + A+ L +MK+ G+QP+V Y L+ +LC K A++
Sbjct: 338 IVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALC-KGGRLENAKQFF 396
Query: 503 EDMRLKGLHLN 513
+ + +KG HLN
Sbjct: 397 QHLLVKGYHLN 407
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 141/346 (40%), Gaps = 37/346 (10%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
LN LI F L AF VF G + T I+ L A +K++
Sbjct: 131 LNILINCFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVV 190
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
G D G +I+ CK G+ K + + P + +I LC+ ++ V
Sbjct: 191 AQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCK-NKRV 249
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
A D+ + + + ++++I C M ++ A +LL++M + P FN +
Sbjct: 250 GDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNIL 309
Query: 380 ISAYSKAG---------------DMTP--------------------AMEMLKLMRSRGL 404
I A K G +M P A+ + K M+ +G+
Sbjct: 310 IDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGI 369
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
+PDVY+YT L+ GG++E A + L+ TY+ +I G CK F +
Sbjct: 370 QPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMD 429
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
L ++M+ G P+ + +I +L K + + AEK L +M +GL
Sbjct: 430 LKSKMEGKGCMPDAITFKTIICALFEKDENDK-AEKFLREMIARGL 474
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 78/176 (44%), Gaps = 1/176 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F +++ SL + K +L + S G P N +I+ + +T A + +
Sbjct: 96 FDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVFANIL 155
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
RG PD T L+ G G+++ A ++ +L V+Y TLI G CK E
Sbjct: 156 KRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETK 215
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+LL +++ V+P+V Y +I LC K A L +M +KG+ N T
Sbjct: 216 AVARLLRKLEGHSVKPDVVMYTTIIHCLC-KNKRVGDACDLYSEMIVKGISPNVFT 270
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 1/145 (0%)
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
++M+ PPP F++++S+ K + + K +S G+ P++ T L++ + +
Sbjct: 81 FNRMLLMRPPPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCH 140
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
+ A + K +T +TLI+G C E AL +++ G Q +
Sbjct: 141 LAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVS 200
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDM 505
Y LI LC KA + + +LL +
Sbjct: 201 YGTLINGLC-KAGETKAVARLLRKL 224
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 92/243 (37%), Gaps = 40/243 (16%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ C KE ++L + +K + V T IL I K GK A +F
Sbjct: 272 NTLIYGFCIMGNLKEAFSLLNEMK-LKNINPDVYTFNIL---IDALGKEGKIDEAISLFE 327
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ N TY I+ L + + A ++C+KM E G PD ++ CKGG
Sbjct: 328 EMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGG 387
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ + A K+ + V + ++ ++ +
Sbjct: 388 RLENA---------KQFFQHLLVKGYHLN---------------------------VRTY 411
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+ +I LC+ L SKM +G P F ++I A + + A + L+ M +
Sbjct: 412 NVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREMIA 471
Query: 402 RGL 404
RGL
Sbjct: 472 RGL 474
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 142/322 (44%), Gaps = 32/322 (9%)
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
+AFE+FN+ + GC N TY I L + A +M G LP I
Sbjct: 281 SAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPI 340
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYP-------------------------------PQS 303
C G+ ++A ++ ++K P P +
Sbjct: 341 VALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRDGVVPNT 400
Query: 304 VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSK 363
V + ++ E+ + AL + + ++ +IR C + D A ++L+
Sbjct: 401 VTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTN 460
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
M+ P P +N +I Y +GD A+ +L+LM++ G +PD ++YT L+SG+ +
Sbjct: 461 MLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISK 520
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
ME A + NE + VTY LI GYCK E+ DCA ++L MK G +PNV YN
Sbjct: 521 MELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNV 580
Query: 484 LIQSLCLKALDWRTAEKLLEDM 505
LI L K ++ AE+L + M
Sbjct: 581 LIHGLT-KQNNFSGAEELCKVM 601
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 126/288 (43%), Gaps = 1/288 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
NELI + +G + A + TY I+ D A V E M
Sbjct: 439 NELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKA 498
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD ++IS FCK K + A ++ ++ + P + LIS C+ DE +
Sbjct: 499 NGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCK-DEKLD 557
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A ML+ + ++ ++ +I L + + GA+ L M+ E P +++VI
Sbjct: 558 CAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVI 617
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ G + A+EM M G P+++TY+ L+ G++EEA E+ +E KK
Sbjct: 618 NGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLI 677
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
VTY +I + D A L EM + G QP + Y+ LI+ L
Sbjct: 678 PDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGL 725
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 141/328 (42%), Gaps = 10/328 (3%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVL-TVEILNELIALFSKLGKGKAAFEVFN 221
L+ +C+S V D + E+ GVL TV I +G+ + A+++F
Sbjct: 303 TLINGLCNS---GRVNEALDFISEM--TRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFI 357
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
GC N TY +S +++ A + +M G +P++ +++ +
Sbjct: 358 DMKKKGCKPNVYTY---TSLISGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENM 414
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ A +V+ + + P S LI C +T K A+ ML + + +
Sbjct: 415 EIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEK-AMSMLTNMLKGRPTPTLVTY 473
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+ +I+ C D A +L M + G P + +IS + K M A M M
Sbjct: 474 NIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMD 533
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
RGL P+ TYT L+SGY +++ A +L K++ R + TY+ LI G K F
Sbjct: 534 RGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSG 593
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A +L M + + P+V Y+ +I LC
Sbjct: 594 AEELCKVMLEEKISPDVVTYSTVINGLC 621
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 153/367 (41%), Gaps = 38/367 (10%)
Query: 182 DIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEA 241
D+ + G K G+ T L LI L +KL + +++ G N Y I A
Sbjct: 182 DMFSQRGPK-MGLFTYTTL--LIQL-NKLNMTSTVMDRYHQILREGLQPNLLIYNSVINA 237
Query: 242 LSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPP 301
L + A S+ K+ ++G PD+ +I +C+ A ++ E+ P
Sbjct: 238 LCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPN 297
Query: 302 QSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRM---------- 351
+ + LI+ LC V ALD + + + + F++ I +LC M
Sbjct: 298 AATYSTLINGLCNSGR-VNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIF 356
Query: 352 ---------KDVHGAKTLLS-------------KMISEGPPPGNAVFNSVISAYSKAGDM 389
+V+ +L+S +M +G P +N++++ + ++
Sbjct: 357 IDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEI 416
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
A+ + +M G P+ +Y L+ GY G E+A +L K + VTY+ +
Sbjct: 417 DSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNII 476
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
I+GYC + D A+++L MK G QP+ Y +LI C K A + +M +G
Sbjct: 477 IKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFC-KISKMELASGMFNEMMDRG 535
Query: 510 LHLNGIT 516
L N +T
Sbjct: 536 LCPNEVT 542
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 1/204 (0%)
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
C + AL+ LD FS K + +++++ L ++ +++ EG P
Sbjct: 168 CSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPN 227
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
++NSVI+A K G++ A ++ + G+KPD +TYT ++ GY ++ A EI N
Sbjct: 228 LLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFN 287
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
+ + TY TLI G C + AL ++EM GV P V + I +LC
Sbjct: 288 RMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMG 347
Query: 493 LDWRTAEKLLEDMRLKGLHLNGIT 516
A K+ DM+ KG N T
Sbjct: 348 -RIEDAWKIFIDMKKKGCKPNVYT 370
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 93/187 (49%), Gaps = 7/187 (3%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++SVI +LC+ +V A+++++K+ G P + S+I Y + D+ A E+ M
Sbjct: 231 YNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMD 290
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV-TYHTLIRGYCKLEEF 459
G +P+ TY+ L++G N G++ EA + ++E + H L V T+ I C +
Sbjct: 291 EEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTR-HGVLPTVHTFTAPIVALCDMGRI 349
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RA 518
+ A K+ +MK G +PNV Y LI + R A L M G+ N +T A
Sbjct: 350 EDAWKIFIDMKKKGCKPNVYTYTSLISGQRVS----RMAIGLFHRMSRDGVVPNTVTYNA 405
Query: 519 LIRAVKE 525
L+ + E
Sbjct: 406 LMNVLME 412
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 100/219 (45%), Gaps = 1/219 (0%)
Query: 202 ELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET 261
ELI+ F K+ K + A +FN+ D G N+ TY I + + D A + E+M +
Sbjct: 510 ELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRS 569
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
G P+ + +I K A + + E+K+ P + +I+ LC + + L
Sbjct: 570 GCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCN-NGAIPL 628
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
AL+M + + +SS+I++L + V A+ + S++ +G P + +I
Sbjct: 629 ALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIE 688
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
+G + A + L M + G +P + TY L+ G N
Sbjct: 689 VCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQN 727
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 12/179 (6%)
Query: 316 DETVKLALDMLDDFS-----GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
D K+A+ +L+ G AR + IK S+ ++ A L GP
Sbjct: 138 DTFAKVAMRLLESRDRPAAVGRARIHMIKSCSN-------KAEMTQALNYLDMFSQRGPK 190
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
G + +++ +K + M+ + GL+P++ Y +++ G + +A I
Sbjct: 191 MGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESI 250
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+N+ K+ + TY ++I GYC+ + D A ++ N M + G +PN Y+ LI LC
Sbjct: 251 INKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLC 309
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 96/248 (38%), Gaps = 24/248 (9%)
Query: 190 KEKGVLTVEILN-ELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
K++G++ E+ ++I + GK AF+ + + GC +TY I+ L ++
Sbjct: 672 KKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVY 731
Query: 249 ----------------------DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
D + K+ E + ++S + G+ EA
Sbjct: 732 HKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEA 791
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
+ +Y + P Q + SL + + V LA+D+ S + + + + +I
Sbjct: 792 NNLYRSMVSQSQCPNQDTYKHFLISLLRALK-VDLAMDVFKHMSDQRCELHLTGYKELIC 850
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
+LC++ A+ + KM+S V+ +I+ AG ME L +M + P
Sbjct: 851 TLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGYKDLCMEFLHIMETNRRNP 910
Query: 407 DVYTYTGL 414
+ T L
Sbjct: 911 SSHARTIL 918
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 161/344 (46%), Gaps = 17/344 (4%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
F + + +A + +GCV N Y I +LS+ + A + E+M G +PD
Sbjct: 227 FCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPD 286
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
+E +I CK + EA + + P +L++ LC+ +D
Sbjct: 287 AETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGR-----VDAA 341
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI-SEGPPPGNAVFNSVISAYSK 385
D K I F+++I + AK +LS M+ S G P +NS+I Y K
Sbjct: 342 KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK 401
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
G + A+E+L MR++G KP+VY+YT L+ G+ G+++EA +LNE + + + V
Sbjct: 402 EGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVG 461
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
++ LI +CK A+++ EM G +P+V +N LI LC + + + A LL DM
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC-EVDEIKHALWLLRDM 520
Query: 506 RLKGLHLNGIT----------RALIRAVKELEEDAIENGEALVE 539
+G+ N +T R I+ ++L + + G L E
Sbjct: 521 ISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDE 564
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 167/374 (44%), Gaps = 20/374 (5%)
Query: 117 GYLESSLDSF-ELDLHEDFVLKVLETPLVLGENLVCFFKWVTSGVVDALLKAICSSVGKK 175
GYL + L +D +D ++ + +V+ L+ F VT G +D KA+ S
Sbjct: 326 GYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGF--VTHGRLDDA-KAVLS----- 377
Query: 176 EVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETY 235
D+V G V V N LI + K G A EV + + GC N +Y
Sbjct: 378 ------DMVTSYGI----VPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSY 427
Query: 236 YFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE 295
++ + D A++V +M G P++ +IS FCK + EA ++
Sbjct: 428 TILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPR 487
Query: 296 KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVH 355
K P LIS LC+ DE +K AL +L D E ++++I + R ++
Sbjct: 488 KGCKPDVYTFNSLISGLCEVDE-IKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIK 546
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
A+ L+++M+ +G P +NS+I +AG++ A + + M G P + L+
Sbjct: 547 EARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILI 606
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
+G G +EEA E E S VT+++LI G C+ + L + +++ G+
Sbjct: 607 NGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIP 666
Query: 476 PNVDEYNKLIQSLC 489
P+ +N L+ LC
Sbjct: 667 PDTVTFNTLMSWLC 680
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 189/419 (45%), Gaps = 49/419 (11%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA 216
T GVV +KA C+ E+ + +++++ K V I LI SK + A
Sbjct: 219 TFGVV---MKAFCAV---NEIDSALSLLRDM-TKHGCVPNSVIYQTLIHSLSKCNRVNEA 271
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
++ + GCV + ET+ I L + + A + +M+ G PD G +++
Sbjct: 272 LQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNG 331
Query: 277 FCKGGKAKEAH----------------VVYTLAREKKMYPPQSVVAFLISS------LCQ 314
CK G+ A +++ ++ ++V++ +++S +C
Sbjct: 332 LCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCT 391
Query: 315 ---------EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI 365
++ V LAL++L D + K + ++ ++ C++ + A +L++M
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS 451
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
++G P FN +ISA+ K + A+E+ + M +G KPDVYT+ L+SG +++
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 511
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
A +L + + VTY+TLI + + E A KL+NEM G + YN LI
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571
Query: 486 QSLCLKALDWRTAEKLLEDMRLKG---------LHLNGITRA-LIRAVKELEEDAIENG 534
+ LC +A + A L E M G + +NG+ R+ ++ E +++ + G
Sbjct: 572 KGLC-RAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG 629
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 14/222 (6%)
Query: 285 EAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSV 344
E VY+ K Y V+ L+S C K+A ++ D + F V
Sbjct: 171 EMRNVYSCEPTFKSY--NVVLEILVSGNCH-----KVAANVFYDMLSRKIPPTLFTFGVV 223
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
+++ C + ++ A +LL M G P + ++ ++I + SK + A+++L+ M G
Sbjct: 224 MKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGC 283
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
PD T+ ++ G ++ EA +++N +TY L+ G CK+ D A
Sbjct: 284 VPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKD 343
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLCLKA-LDWRTAEKLLEDM 505
L + +P + +N LI LD A+ +L DM
Sbjct: 344 LFYRIP----KPEIVIFNTLIHGFVTHGRLD--DAKAVLSDM 379
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 68/151 (45%), Gaps = 2/151 (1%)
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS-RGLKPDVYTYTGLMSGY 418
LL +M EG ++F S++ Y KAG ++ MR+ +P +Y ++
Sbjct: 133 LLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEIL 192
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
+G + A + + + T+ +++ +C + E D AL LL +M G PN
Sbjct: 193 VSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNS 252
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
Y LI SL K A +LLE+M L G
Sbjct: 253 VIYQTLIHSLS-KCNRVNEALQLLEEMFLMG 282
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 152/310 (49%), Gaps = 2/310 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N I+ K G+ + A + K + G V N TY I+ + D A++ ++MI
Sbjct: 290 NSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMIS 349
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G + I G+ +A + REK M P LI+ C+ + K
Sbjct: 350 KGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGD-AK 408
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A +LD+ G+ + + ++S+I L + + A L SK+ EG P VFN++I
Sbjct: 409 RAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALI 468
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ G++ A ++LK M + + PD TY LM GY G++EEA ++L+E K+ +
Sbjct: 469 DGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIK 528
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
++Y+TLI GY K + A ++ +EM G P + YN LIQ LC K + AE+
Sbjct: 529 PDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLC-KNQEGEHAEE 587
Query: 501 LLEDMRLKGL 510
LL++M KG+
Sbjct: 588 LLKEMVSKGI 597
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 145/354 (40%), Gaps = 41/354 (11%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA 216
T+ + D L++A C E + ++KE G V +E N++++LF KL + + A
Sbjct: 145 TTLIFDLLVRAYCELKKPNEALECFYLIKEKG----FVPNIETCNQMLSLFLKLNRTQMA 200
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
+ ++ + ++ T+ I L + A M G P+ II
Sbjct: 201 WVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHG 260
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
C GK + A V++ ++K + P IS LC+E L++ SG
Sbjct: 261 HCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGR--------LEEASG----- 307
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
L+ KM+ G P +N++I Y GD+ A
Sbjct: 308 -----------------------LICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYR 344
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
M S+G+ + TY + G+M +A ++ E ++ VT++ LI GYC+
Sbjct: 345 DEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRC 404
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+ A LL+EM G+QP + Y LI L K + A+ L ++ +GL
Sbjct: 405 GDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLG-KRNRMKEADALFSKIQQEGL 457
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 120/248 (48%), Gaps = 2/248 (0%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
++ +C+ K EA + L +EK P ++S + + T ++A + +
Sbjct: 152 LVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRT-QMAWVLYAEMFRM 210
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
+ ++ F+ +I LC+ + AK + M + G P +N++I + G A
Sbjct: 211 NIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRA 270
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
+ + M+ +GL+PD YTY +SG G++EEA ++ + + + VTY+ LI G
Sbjct: 271 RVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDG 330
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
YC + D A +EM G+ ++ YN I +L ++ A+ ++++MR KG+
Sbjct: 331 YCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEG-RMGDADNMIKEMREKGMMP 389
Query: 513 NGITRALI 520
+ +T ++
Sbjct: 390 DAVTHNIL 397
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 101/229 (44%), Gaps = 7/229 (3%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVL-TVEILNELIALFSKLGKGKAAFEVF 220
+ L+ C K + L D + +G KG+ T+ LI + K + K A +F
Sbjct: 395 NILINGYCRCGDAKRAFGLLD--EMVG---KGIQPTLVTYTSLIYVLGKRNRMKEADALF 449
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+K G + + + I+ D A+ + ++M LPD ++ +C+
Sbjct: 450 SKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCRE 509
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
GK +EA + + + + P LIS + + +K A + D+ I
Sbjct: 510 GKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGD-MKDAFRVRDEMMTTGFDPTILT 568
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
++++I+ LC+ ++ A+ LL +M+S+G P ++ + S+I A D+
Sbjct: 569 YNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETVDDL 617
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 139/287 (48%), Gaps = 1/287 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
L+ K K AA+EV + D GCV N TY + L R + A ++ M G
Sbjct: 154 LVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRG 213
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P+ G +I CK G+ K+A + +K P + LI+ LC+ D+ V +
Sbjct: 214 CTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQ-VDES 272
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+ +L K + +SSVI LCR + A LL + S G PP +++++I
Sbjct: 273 IALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDG 332
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
KAG + A ++ ++M G DV TY+ L+ G G+++EA +L + + S
Sbjct: 333 LCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPS 392
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+TY++LI+G C L D A++L+ EM+ P+ YN LI +C
Sbjct: 393 TMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMC 439
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 115/267 (43%), Gaps = 7/267 (2%)
Query: 225 DYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAK 284
D+GC N TY I+ L + D A + E M P ++ + GK +
Sbjct: 3 DHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLE 62
Query: 285 EAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
A ++ +++ V++F L++ LC+ + ++ AL+ I +S
Sbjct: 63 RAMALFQEMLDRR---SHDVISFNILVTGLCRAGK-IETALEFFRKMDDRCSPNVIT-YS 117
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+I LC+ V A LL M + G P + ++ K + A E+L+ M
Sbjct: 118 VLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDA 177
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G P++ TY L+ G ++ +A ++ + + VTY TLI G CK+ A
Sbjct: 178 GCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDA 237
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+L +M D G P++ YN LI LC
Sbjct: 238 CAMLADMIDKGGTPDLMIYNMLINGLC 264
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 3/157 (1%)
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
M G P +NS+I K + A E+ + M+S P + TY L+ G G+
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
+E A + E S ++++ L+ G C+ + + AL+ +M D PNV Y+
Sbjct: 61 LERAMALFQEMLDRRSH-DVISFNILVTGLCRAGKIETALEFFRKMDD-RCSPNVITYSV 118
Query: 484 LIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
LI LC KA A +LLE M+ +G + IT ++
Sbjct: 119 LIDGLC-KANRVSQAVELLESMKARGCSPDVITYTIL 154
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 179/398 (44%), Gaps = 50/398 (12%)
Query: 176 EVYALWDIVK---EIGEKEKGV-----LT-------VEILNELIALFSKLGKGKAAFEVF 220
+VY+ ++K E GE EK LT V I LI K G+ + A ++F
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ G G VAN+ TY I L + + + + EKM E G P+ +++ CK
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDM------------ 325
G+ K+A V+ RE+ + LI LC+E +E K+ M
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 326 ---LDDFSG------------EARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMIS 366
+D F G + + + P ++ ++ CR D GA ++ +M
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
G P + +I ++++ +M A+++ M GL PDV+TY+ L+ G+ GQM E
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A + + + + V Y+T+I GYCK ALKLL EM++ + PNV Y +I+
Sbjct: 462 ASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIE 521
Query: 487 SLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRAVK 524
LC K + AE+L+E M G+ + +LI K
Sbjct: 522 VLC-KERKSKEAERLVEKMIDSGIDPSTSILSLISRAK 558
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 177/387 (45%), Gaps = 18/387 (4%)
Query: 119 LESSLDSFELDLHEDFVLKVLETPLVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVY 178
+ S + S L+L + ++++ V G N CF + LL + VG
Sbjct: 101 INSYVQSQSLNLSISYFNEMVDNGFVPGSN--CF---------NYLLTFV---VGSSSFN 146
Query: 179 ALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFT 238
W E K K VL V LI + G+ + +F++ + ++G N Y
Sbjct: 147 QWWSFFNE--NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTL 204
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
I+ ++ + A + +M + G + + +I+ K G K+ +Y +E +
Sbjct: 205 IDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGV 264
Query: 299 YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
+P +++ LC++ T K A + D+ I ++++I LCR ++ A
Sbjct: 265 FPNLYTYNCVMNQLCKDGRT-KDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEAN 323
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
++ +M S+G P +N++I + G + A+ + + ++SRGL P + TY L+SG+
Sbjct: 324 KVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGF 383
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G A +++ E ++ + S VTY LI + + + + A++L M+++G+ P+V
Sbjct: 384 CRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDV 443
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDM 505
Y+ LI C+K A +L + M
Sbjct: 444 HTYSVLIHGFCIKG-QMNEASRLFKSM 469
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 4/183 (2%)
Query: 332 EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
E K + + +I S + + ++ + + ++M+ G PG+ FN +++ +
Sbjct: 88 ETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQ 147
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
+S+ + DVY++ L+ G G++E++ ++L E + + V Y TLI
Sbjct: 148 WWSFFNENKSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLID 206
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC---LKALDWRTAEKLLEDMRLK 508
G CK E + A L EM +G+ N Y LI L +K + EK+ ED
Sbjct: 207 GCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFP 266
Query: 509 GLH 511
L+
Sbjct: 267 NLY 269
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 170/390 (43%), Gaps = 52/390 (13%)
Query: 191 EKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDW 250
E T + LI FS++G + A V+ K + + ++ L ++ FD
Sbjct: 120 ESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLVKKGRFDT 176
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
W V M+ G+ P+ G +I C+ G +A ++ EKK++P + LI
Sbjct: 177 MWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIR 236
Query: 311 SLCQEDET----------------------------------VKLALDMLDDFSGEARKY 336
LC E VK AL++ + G+
Sbjct: 237 GLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLP 296
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ F +I LC+ ++ A+ L M S G P V+N +I Y KAG+++ A+ +
Sbjct: 297 NVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLH 356
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
+ + PDV+TY+ L+ G +MEEA +L E KK + VTY+TLI GYCK
Sbjct: 357 SEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKE 416
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL------ 510
+ A+++ ++M + G++PN+ ++ LI C KA A L +M +KGL
Sbjct: 417 GNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYC-KAGKMEAAMGLYTEMVIKGLLPDVVA 475
Query: 511 -------HL-NGITRALIRAVKELEEDAIE 532
H +G T+ R KE++E +
Sbjct: 476 YTALIDGHFKDGNTKEAFRLHKEMQEAGLH 505
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 151/361 (41%), Gaps = 33/361 (9%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N ++ + K+ K A E++ + G + N T+ I+ L + A M
Sbjct: 267 NTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMAS 326
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G +P+ +I +CK G EA +++ + ++ P + LI LC D
Sbjct: 327 FGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDR--- 383
Query: 321 LALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
++ D E +K P ++++I C+ ++ A + S+M +G P F
Sbjct: 384 --MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITF 441
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
+++I Y KAG M AM + M +GL PDV YT L+ G+ G +EA + E ++
Sbjct: 442 STLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQE 501
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLL-------------NEMKDVGVQPNVDEYNK 483
+ T LI G CK A+KL NE+ PN Y
Sbjct: 502 AGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTA 561
Query: 484 LIQSLCLKALDWRTAEKLLEDMRLKGLH---------LNGITRAL-IRAVKELEEDAIEN 533
LIQ LC ++ A K DMR GL + G RA+ +R V L+ D ++
Sbjct: 562 LIQGLCTDGRIFK-ASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKM 620
Query: 534 G 534
G
Sbjct: 621 G 621
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 162/341 (47%), Gaps = 27/341 (7%)
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
+A V +GCV N Y I +LS+ + A + E+M G +PD+E +I
Sbjct: 229 SALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVI 288
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR 334
CK + EA + + P +L++ LC+ V A D+
Sbjct: 289 LGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGR-VDAAKDLF-------- 339
Query: 335 KYAI-KPFSSVIRSLCRMKDVHG----AKTLLSKMI-SEGPPPGNAVFNSVISAYSKAGD 388
Y I KP S + +L HG AK +LS M+ S G P +NS+I Y K G
Sbjct: 340 -YRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGL 398
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHT 448
+ A+E+L+ MR++G KP+VY+YT L+ G+ G+++EA +LNE + + + V ++
Sbjct: 399 VGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNC 458
Query: 449 LIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLK 508
LI +CK A+++ EM G +P+V +N LI LC + + + A LL DM +
Sbjct: 459 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC-EVDEIKHALWLLRDMISE 517
Query: 509 GLHLNGIT----------RALIRAVKELEEDAIENGEALVE 539
G+ N +T R I+ ++L + + G L E
Sbjct: 518 GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDE 558
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 189/419 (45%), Gaps = 49/419 (11%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA 216
T GVV +KA+C+ EV + +++++ K V I LI SK + A
Sbjct: 213 TFGVV---MKALCAV---NEVDSALSVLRDM-TKHGCVPNSVIYQTLIHSLSKCNRVNEA 265
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
++ + GCV + ET+ I L + + A + +M+ G PD G +++
Sbjct: 266 LQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNG 325
Query: 277 FCKGGKAKEAH----------------VVYTLAREKKMYPPQSVVAFLISS------LCQ 314
CK G+ A +++ ++ ++V++ +++S +C
Sbjct: 326 LCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCT 385
Query: 315 EDET---------VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI 365
+ V LAL++L D + K + ++ ++ C++ + A LL++M
Sbjct: 386 YNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMS 445
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
++G P FN +ISA+ K + A+E+ + M +G KPDVYT+ L+SG +++
Sbjct: 446 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 505
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
A +L + + VTY+TLI + + E A KL+NEM G + YN LI
Sbjct: 506 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLI 565
Query: 486 QSLCLKALDWRTAEKLLEDMRLKGL---------HLNGITRA-LIRAVKELEEDAIENG 534
+ LC +A + A L E M GL +NG+ R+ ++ E +++ + G
Sbjct: 566 KGLC-RAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRG 623
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 133/289 (46%), Gaps = 1/289 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI + K G A EV + GC N +Y ++ + D A+++ +M
Sbjct: 387 NSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSA 446
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P++ +IS FCK + EA ++ K P LIS LC+ DE +K
Sbjct: 447 DGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE-IK 505
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
AL +L D E ++++I + R ++ A+ L+++M+ +G +NS+I
Sbjct: 506 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLI 565
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+AG++ A + + M GL P + L++G G +EEA E E S
Sbjct: 566 KGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGST 625
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
VT+++LI G C+ + L + +++ G+ P+ YN L+ LC
Sbjct: 626 PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLC 674
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 111/254 (43%), Gaps = 15/254 (5%)
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALD 324
P + ++ G K A V+ +K+ P ++ +LC +E V AL
Sbjct: 174 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNE-VDSALS 232
Query: 325 MLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
+L D + K+ P + ++I SL + V+ A LL +M G P FN VI
Sbjct: 233 VLRDMT----KHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVI 288
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
K + A +M+ M RG PD TY LM+G G+++ A ++ K S
Sbjct: 289 LGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTS- 347
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEM-KDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
V ++TLI G+ D A +L++M G+ P+V YN LI K L E
Sbjct: 348 ---VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALE 404
Query: 500 KLLEDMRLKGLHLN 513
+L DMR KG N
Sbjct: 405 -VLRDMRNKGCKPN 417
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M SR + P ++T+ +M +++ A +L + K+ + V Y TLI K
Sbjct: 202 MLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNR 261
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ AL+LL EM +G P+ + +N +I LC K A K++ M ++G + IT
Sbjct: 262 VNEALQLLEEMFLMGCVPDAETFNDVILGLC-KFDRINEAAKMVNRMLIRGFTPDDIT 318
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 139/287 (48%), Gaps = 1/287 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
L+ K K AA+EV + D GCV N TY + L R + A ++ M G
Sbjct: 232 LVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRG 291
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P+ G +I CK G+ K+A + +K P + LI+ LC+ D+ V +
Sbjct: 292 CTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQ-VDES 350
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+ +L K + +SSVI LCR + A LL + S G PP +++++I
Sbjct: 351 IALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDG 410
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
KAG + A ++ ++M G DV TY+ L+ G G+++EA +L + + S
Sbjct: 411 LCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPS 470
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+TY++LI+G C L D A++L+ EM+ P+ YN LI +C
Sbjct: 471 TMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMC 517
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 111/249 (44%), Gaps = 11/249 (4%)
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALD 324
PD ++ FC+GG+ +A + R K + P + + LI LC+ ++ AL
Sbjct: 7 PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSID-ALR 65
Query: 325 MLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
G +++++ L + K + A +L +M G P +NS+I
Sbjct: 66 CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA--KKNH---S 439
K + A E+ + M+S P + TY L+ G G++E A + E +++H
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185
Query: 440 RLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK---ALD 494
R SP +TY LI G CK A++LL MK G P+V Y L+ LC + A
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 245
Query: 495 WRTAEKLLE 503
W ++L+
Sbjct: 246 WEVLREMLD 254
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 119/293 (40%), Gaps = 6/293 (2%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K + A F G VA+ Y + L + K D A ++ +M + G
Sbjct: 50 LIDGLCKAKRSIDALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHG 109
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETV 319
P+ +I CK + A ++ + + P L+ L + + +
Sbjct: 110 CEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAM 169
Query: 320 KLALDMLDDFSGEARKYA---IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
L +MLD S + + +S +I LC+ V A LL M + G P +
Sbjct: 170 ALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITY 229
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
++ K + A E+L+ M G P++ TY L+ G ++ +A ++ +
Sbjct: 230 TILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTC 289
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ VTY TLI G CK+ A +L +M D G P++ YN LI LC
Sbjct: 290 RGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLC 342
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 18/211 (8%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
GC + Y I+ L + D A+ + E M G D +I CK G+ EA
Sbjct: 396 GCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEA 455
Query: 287 HVVYTLAREKKMYPPQSVVAF--LISSLC---QEDETVKLALDM-LDDFSGEARKYAIKP 340
H++ LAR +M P S + + LI LC DE ++L +M + + A Y I
Sbjct: 456 HLL--LARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNI-- 511
Query: 341 FSSVIRSLCRMKDVHGAKTLL----SKMISEGPPPGNAV-FNSVISAYSKAGDMTPAMEM 395
+I +CRM+ V A LL ++ ++ G + + ++S+I KAG + A++
Sbjct: 512 ---LIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDY 568
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
+ M G+ PD TY+ L+ G + E
Sbjct: 569 FQEMIDNGVIPDHITYSILLEGLKKSKDLHE 599
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 1/136 (0%)
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P + +++ + + G++ A MRS+ L P+V+ + L+ G + +A
Sbjct: 7 PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
+ + V Y L+ G K + D AL +L+EM+D G +PNV YN LI LC
Sbjct: 67 FRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC- 125
Query: 491 KALDWRTAEKLLEDMR 506
K + A++L E M+
Sbjct: 126 KNNEPDRAQELFEHMK 141
>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
Length = 1014
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 169/331 (51%), Gaps = 5/331 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ +C ++ +E + +++ IG V L+ F ++ + + A + +
Sbjct: 237 NVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV----TYRTLVYGFCRMEELEMALRITH 292
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G V ++ F I+ L ++++ + A+S+ K+ + G +P+ +I CK
Sbjct: 293 DMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNE 352
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ +A ++ + + P + A LI +LC+ ++ AL + D + K + P+
Sbjct: 353 RFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRG-MIEDALCLFDKMRDKGIKVTVYPY 411
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+S+I C+ + A+ LLS M+ EG P A ++ +I+ + GD++ AME+ + M
Sbjct: 412 NSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAE 471
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
RG+ + YT+T L++G+ +M+EA + ++ ++ + VT++ +I GYC +
Sbjct: 472 RGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRK 531
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
A +L ++M ++G++P+ Y LI LCL +
Sbjct: 532 AFQLYDQMVEMGLKPDNYTYRSLISGLCLTS 562
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 149/331 (45%), Gaps = 5/331 (1%)
Query: 205 ALFSKLGKGKA---AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET 261
AL KL K + A +F + G N+ TY I AL +R + + A + +KM +
Sbjct: 343 ALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDK 402
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
G +I+ +CK G A + + ++ + P + + LI+ LC+ + +
Sbjct: 403 GIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGD-LSS 461
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A+++ + + + F+++I C+ K + A L KMI P FN +I
Sbjct: 462 AMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIE 521
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
Y G++ A ++ M GLKPD YTY L+SG + +A E + + + +++ L
Sbjct: 522 GYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVL 581
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+ + L+ G + F L +EM GV+ ++ + ++ + LK D + L
Sbjct: 582 NNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYA-ALKQHDKEKSCVL 640
Query: 502 LEDMRLKGLHLNGITRALIRAVKELEEDAIE 532
+M+ +G+ + I + EE+ I+
Sbjct: 641 FREMKEQGVKPDDIFYTCMIDALSKEENMIQ 671
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 105/228 (46%), Gaps = 39/228 (17%)
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
S ++ SL +++ A+ L KM+ G V+ + I AY ++ ++ A ++ M S
Sbjct: 167 SQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMES 226
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+K Y LM G +++EA E+ N VTY TL+ G+C++EE +
Sbjct: 227 EGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEM 286
Query: 462 ALKLLNEM-----------------------------------KDVGVQPNVDEYNKLIQ 486
AL++ ++M D+G+ PNV YN LI
Sbjct: 287 ALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALID 346
Query: 487 SLCLKALDWRTAEKLLEDMRLKGLHLNGITRA-LIRAV--KELEEDAI 531
LC K + A++L ++M +GL N +T A LI A+ + + EDA+
Sbjct: 347 KLC-KNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDAL 393
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 135/342 (39%), Gaps = 6/342 (1%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
L+ A+C ++ L+D +++ G K +TV N LI + K G A + +
Sbjct: 379 LIHALCKRGMIEDALCLFDKMRDKGIK----VTVYPYNSLINGYCKQGSLDRARGLLSGM 434
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
G +Y I L R A + +M E G ++ +I+ FCK K
Sbjct: 435 VKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKM 494
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
EA ++ + + P + +I C ++ A + D K + S
Sbjct: 495 DEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVG-NIRKAFQLYDQMVEMGLKPDNYTYRS 553
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
+I LC V A ++ + + N +++ + G T + M RG
Sbjct: 554 LISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRG 613
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
+K D+ ++T ++ E++C + E K+ + + Y +I K E AL
Sbjct: 614 VKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQAL 673
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
++M G PN + LI +LC K+ +AE L ++M
Sbjct: 674 NCWDQMVIDGYSPNTVTHTVLINNLC-KSGYLGSAELLCKEM 714
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 128/318 (40%), Gaps = 47/318 (14%)
Query: 176 EVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKG--KAAFEVFNKFGDYGCVANQE 233
E Y LWD + G K +++++ I +++ L + + + +F + + G +
Sbjct: 601 ETYHLWDEMAVRGVK------LDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDI 654
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
Y I+ALS+ + A + ++M+ G P++ +I+ CK G A ++
Sbjct: 655 FYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEM 714
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
+ P + + E + K A D L + +I F+ +I+ LC+
Sbjct: 715 LAGNVLPNKFTYNCFLDYFATEGDMEK-AKD-LHSAMLQGHLASIVSFNILIKGLCKAGK 772
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
+ A L+ K+ G P ++++I K GD+ A E+ M +GLKPDV
Sbjct: 773 IQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDV----- 827
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE-EFDCALKLLNEMKDV 472
V Y+ IR +C + E D AL + M
Sbjct: 828 ------------------------------VAYNIFIR-WCNVHGESDKALGIYTNMIRS 856
Query: 473 GVQPNVDEYNKLIQSLCL 490
GVQPN D Y L+ + L
Sbjct: 857 GVQPNWDTYRALLSGISL 874
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 94/225 (41%), Gaps = 36/225 (16%)
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
LA D+ D +++ IR+ C +++ GA+ L+ +M SEG +N ++
Sbjct: 181 LARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLM 240
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC------------ 428
K + A+E+ +M + G+ D TY L+ G+ ++E A
Sbjct: 241 YGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFV 300
Query: 429 ----------------EILNEAKKNHSRLSPV-------TYHTLIRGYCKLEEFDCALKL 465
E++ EA +L + Y+ LI CK E FD A +L
Sbjct: 301 PSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRL 360
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
EM G++PN Y LI +LC + + A L + MR KG+
Sbjct: 361 FKEMAGRGLEPNEVTYAILIHALCKRGM-IEDALCLFDKMRDKGI 404
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 1/141 (0%)
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
+S G + ++ + K A ++ M G+ D Y YT + Y +
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
+ A ++ + + S V Y+ L+ G CK A+++ N M ++GV + Y L
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274
Query: 485 IQSLCLKALDWRTAEKLLEDM 505
+ C + + A ++ DM
Sbjct: 275 VYGFC-RMEELEMALRITHDM 294
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 170/390 (43%), Gaps = 52/390 (13%)
Query: 191 EKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDW 250
E T + LI FS++G + A V+ K + + ++ L ++ FD
Sbjct: 120 ESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLVKKGRFDT 176
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
W V M+ G+ P+ G +I C+ G +A ++ EKK++P + LI
Sbjct: 177 MWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIR 236
Query: 311 SLCQEDET----------------------------------VKLALDMLDDFSGEARKY 336
LC E VK AL++ + G+
Sbjct: 237 GLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLP 296
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ F +I LC+ ++ A+ L M S G P V+N +I Y KAG+++ A+ +
Sbjct: 297 NVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLH 356
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
+ + PDV+TY+ L+ G +MEEA +L E KK + VTY+TLI GYCK
Sbjct: 357 SEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKE 416
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL------ 510
+ A+++ ++M + G++PN+ ++ LI C KA A L +M +KGL
Sbjct: 417 GNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYC-KAGKMEAAMGLYTEMVIKGLLPDVVA 475
Query: 511 -------HL-NGITRALIRAVKELEEDAIE 532
H +G T+ R KE++E +
Sbjct: 476 YTALIDGHFKDGNTKEAFRLHKEMQEAGLH 505
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 128/308 (41%), Gaps = 34/308 (11%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
AF +F++ + Y I L A S+ M +G LP+ ++
Sbjct: 212 AFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMD 271
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV---KLALDM------- 325
+CK K+A +Y + P LI LC+ DE V K +DM
Sbjct: 272 GYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVP 331
Query: 326 --------LDDFS------------GEARKYAIKP----FSSVIRSLCRMKDVHGAKTLL 361
+D + E K+ I P +S +I+ LC + + A LL
Sbjct: 332 NIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLL 391
Query: 362 SKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG 421
+M +G P +N++I Y K G+M A+E+ M +G++P++ T++ L+ GY
Sbjct: 392 QEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKA 451
Query: 422 GQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEY 481
G+ME A + E V Y LI G+ K A +L EM++ G+ PNV
Sbjct: 452 GKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTL 511
Query: 482 NKLIQSLC 489
+ LI LC
Sbjct: 512 SCLIDGLC 519
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 126/292 (43%), Gaps = 11/292 (3%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N ++ + K+ K A E++ + G + N T+ I+ L + A M
Sbjct: 267 NTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMAS 326
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G +P+ +I +CK G EA +++ + ++ P + LI LC D
Sbjct: 327 FGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDR--- 383
Query: 321 LALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
++ D E +K P ++++I C+ ++ A + S+M +G P F
Sbjct: 384 --MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITF 441
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
+++I Y KAG M AM + M +GL PDV YT L+ G+ G +EA + E ++
Sbjct: 442 STLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQE 501
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ T LI G CK A+KL + G + N+L +SL
Sbjct: 502 AGLHPNVFTLSCLIDGLCKDGRISDAIKLF--LAKTGTDTTGSKTNELDRSL 551
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 170/390 (43%), Gaps = 52/390 (13%)
Query: 191 EKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDW 250
E T + LI FS++G + A V+ K + + ++ L ++ FD
Sbjct: 120 ESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLVKKGRFDT 176
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
W V M+ G+ P+ G +I C+ G +A ++ EKK++P + LI
Sbjct: 177 MWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIR 236
Query: 311 SLCQEDET----------------------------------VKLALDMLDDFSGEARKY 336
LC E VK AL++ + G+
Sbjct: 237 GLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLP 296
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ F +I LC+ ++ A+ L M S G P V+N +I Y KAG+++ A+ +
Sbjct: 297 NVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLH 356
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
+ + PDV+TY+ L+ G +MEEA +L E KK + VTY+TLI GYCK
Sbjct: 357 SEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKE 416
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL------ 510
+ A+++ ++M + G++PN+ ++ LI C KA A L +M +KGL
Sbjct: 417 GNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYC-KAGKMEAAMGLYTEMVIKGLLPDVVA 475
Query: 511 -------HL-NGITRALIRAVKELEEDAIE 532
H +G T+ R KE++E +
Sbjct: 476 YTALIDGHFKDGNTKEAFRLHKEMQEAGLH 505
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 151/361 (41%), Gaps = 33/361 (9%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N ++ + K+ K A E++ + G + N T+ I+ L + A M
Sbjct: 267 NTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMAS 326
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G +P+ +I +CK G EA +++ + ++ P + LI LC D
Sbjct: 327 FGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDR--- 383
Query: 321 LALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
++ D E +K P ++++I C+ ++ A + S+M +G P F
Sbjct: 384 --MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITF 441
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
+++I Y KAG M AM + M +GL PDV YT L+ G+ G +EA + E ++
Sbjct: 442 STLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQE 501
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLL-------------NEMKDVGVQPNVDEYNK 483
+ T LI G CK A+KL NE+ PN Y
Sbjct: 502 AGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTA 561
Query: 484 LIQSLCLKALDWRTAEKLLEDMRLKGLH---------LNGITRAL-IRAVKELEEDAIEN 533
LIQ LC ++ A K DMR GL + G RA+ +R V L+ D ++
Sbjct: 562 LIQGLCTDGRIFK-ASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKM 620
Query: 534 G 534
G
Sbjct: 621 G 621
Score = 42.0 bits (97), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
NS+I+ YSK G++ A + + K DV T+T ++ G+A GQ EEA ++ E K+
Sbjct: 788 NSLINMYSKCGEIGTARRLFDGTQ----KKDVTTWTSMIVGHALHGQAEEALQLFTEMKE 843
Query: 437 NHSR 440
+ R
Sbjct: 844 TNKR 847
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 164/360 (45%), Gaps = 16/360 (4%)
Query: 131 HEDFVLKVLETPLVLG--ENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIG 188
H DF + VL LG + + F +AL+ +C+ KE L++ + + G
Sbjct: 143 HVDFSVSVLGKMFKLGIHPDAITF---------NALINGLCNEGKIKEAVELFNEMVKRG 193
Query: 189 EKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
+ + ++N L K G A +VF K GC N TY I++L + ++
Sbjct: 194 HEPNVISYTTVINGL----CKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLV 249
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
+ A +M+E G P+ I+ FC G+ EA ++ + + P L
Sbjct: 250 NDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTIL 309
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
+ LC+E V A + + + + + I +++++ C + ++ AK + MI +G
Sbjct: 310 VDGLCKEG-MVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKG 368
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
PG +N +I+ Y K+ M A +L M + L PD TY+ LM G G+ +EA
Sbjct: 369 CAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEAL 428
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ E + VTY L+ G+CK D ALKLL MK+ ++PN+ Y LI+ +
Sbjct: 429 NLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGM 488
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 138/315 (43%), Gaps = 2/315 (0%)
Query: 202 ELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET 261
+ + F+K + + N+ + N + I L R D++ SV KM +
Sbjct: 98 KFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKL 157
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
G PD+ +I+ C GK KEA ++ ++ P +I+ LC+ T +
Sbjct: 158 GIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNT-SM 216
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A+D+ K + +S++I SLC+ + V+ A LS+M+ G PP +NS++
Sbjct: 217 AVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVH 276
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
+ G + A + K M R + P+ T+T L+ G G + EA + +
Sbjct: 277 GFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEP 336
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
TY+ L+ GYC + A K+ M G P YN LI C K+ A+ L
Sbjct: 337 DISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYC-KSRRMDEAKSL 395
Query: 502 LEDMRLKGLHLNGIT 516
L +M K L+ + +T
Sbjct: 396 LAEMYHKALNPDTVT 410
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 147/328 (44%), Gaps = 11/328 (3%)
Query: 191 EKGVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
E+G+ V N ++ F LG+ A +F + + N T+ ++ L + +
Sbjct: 261 ERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVS 320
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A V E M E G PD ++ +C EA V+ + K P LI
Sbjct: 321 EARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILI 380
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMI 365
+ C+ +D E A+ P +S++++ LC++ A L +M
Sbjct: 381 NGYCKSRR-----MDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMC 435
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
S GP P + ++ + K G + A+++LK M+ + L+P++ YT L+ G G++E
Sbjct: 436 SYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLE 495
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
A E+ ++ + +R TY +I+G K D A L +M+D G PN YN +I
Sbjct: 496 VAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMI 555
Query: 486 QSLCLKALDWRTAEKLLEDMRLKGLHLN 513
Q L+ D TA +L+++M K +N
Sbjct: 556 QGF-LQNQDSSTAIRLIDEMVGKRFSVN 582
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 134/321 (41%), Gaps = 2/321 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
LN LI +L + V K G + T+ I L A + +M+
Sbjct: 131 LNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMV 190
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G P+ +I+ CK G A V+ + P + +I SLC+ D V
Sbjct: 191 KRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCK-DRLV 249
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
A++ L + + ++S++ C + ++ A L +M+ P F +
Sbjct: 250 NDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTIL 309
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+ K G ++ A + + M +G++PD+ TY LM GY M EA ++ +
Sbjct: 310 VDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGC 369
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
+Y+ LI GYCK D A LL EM + P+ Y+ L+Q LC + + A
Sbjct: 370 APGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLC-QLGRPKEAL 428
Query: 500 KLLEDMRLKGLHLNGITRALI 520
L ++M G H N +T ++
Sbjct: 429 NLFKEMCSYGPHPNLVTYVIL 449
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 4/180 (2%)
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG 422
+M+ P P F + +++K + + + M + +VY+ L++
Sbjct: 83 RMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLN 142
Query: 423 QMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
++ + +L + K +T++ LI G C + A++L NEM G +PNV Y
Sbjct: 143 HVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYT 202
Query: 483 KLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI---RAVKELEEDAIENGEALVE 539
+I LC K + A + + M G N +T + I L DA+E +VE
Sbjct: 203 TVINGLC-KTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVE 261
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 155/320 (48%), Gaps = 10/320 (3%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N ++ L +LGK K A + + G V + +Y ++ + + + E++
Sbjct: 256 NIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQR 315
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ IIS+ CK G+ EA V + + ++++P V LIS + V
Sbjct: 316 KGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSG-NVS 374
Query: 321 LALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ + D E ++ I P ++S+I LC+ V A+ L S+M+S+G P +
Sbjct: 375 VEYKLFD----EMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTY 430
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
++I Y KAG+M A + M +GL P+V TYT L+ G G+++ A E+L+E +
Sbjct: 431 TALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSE 490
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ + TY+ LI G CK+ + A+KL+ EM G P+ Y ++ + C K +
Sbjct: 491 KGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYC-KMGEMA 549
Query: 497 TAEKLLEDMRLKGLHLNGIT 516
A +LL M KGL +T
Sbjct: 550 KAHELLRIMLDKGLQPTIVT 569
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 152/316 (48%), Gaps = 2/316 (0%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+ LI+ F K G +++F++ V + TY I L + A + +M
Sbjct: 359 VYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEM 418
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+ G PD +I +CK G+ KEA ++ EK + P L+ LC+ E
Sbjct: 419 LSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGE- 477
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
V +A ++L + S + + + ++++I LC++ ++ A L+ +M G P + +
Sbjct: 478 VDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTT 537
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
++ AY K G+M A E+L++M +GL+P + T+ LM+G+ G +E+ ++
Sbjct: 538 IMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKG 597
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
+ T+++L++ YC +++ M GV P+ + YN LI+ C KA + + A
Sbjct: 598 IMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHC-KARNMKEA 656
Query: 499 EKLLEDMRLKGLHLNG 514
L ++M KG L
Sbjct: 657 WFLHKEMVEKGFSLTA 672
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 125/271 (46%), Gaps = 1/271 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + K G+ K AF + N+ + G N TY ++ L + D A + +M E G
Sbjct: 433 LIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKG 492
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P+ +I+ CK G ++A + +P ++ + C+ E K A
Sbjct: 493 LQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAK-A 551
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++L + + I F+ ++ C + + L+ M+ +G P FNS++
Sbjct: 552 HELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQ 611
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y +M +E+ K M ++G+ PD TY L+ G+ M+EA + E + L+
Sbjct: 612 YCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLT 671
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
+Y++LI+G+ K ++F+ A KL EM+ G
Sbjct: 672 AASYNSLIKGFYKRKKFEEARKLFEEMRTHG 702
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 99/210 (47%), Gaps = 1/210 (0%)
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
++ L + ++ A + ++S + ++ ++ LC++ V A +LL +M
Sbjct: 221 LFLARLSNSFDGIRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEF 280
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
G P ++ ++ Y + + +++++ ++ +GLKP+ YTY ++S G++ E
Sbjct: 281 RGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVE 340
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A ++L K V Y TLI G+ K KL +EMK + P+ Y +I
Sbjct: 341 AEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIH 400
Query: 487 SLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
LC +A A KL +M KGL + +T
Sbjct: 401 GLC-QAGKVVEARKLFSEMLSKGLKPDEVT 429
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 122/306 (39%), Gaps = 38/306 (12%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+ C + KE ++L + + E G V +++ L K G+ A E+ ++
Sbjct: 432 ALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGL----CKCGEVDIANELLHE 487
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ G N TY I L + + A + E+M G PD+ I+ +CK G+
Sbjct: 488 MSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGE 547
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDD--------FSG 331
+AH + + +K + P L++ C ++ +L MLD F+
Sbjct: 548 MAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNS 607
Query: 332 EARKYAIK-----------------------PFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
++Y I+ ++ +I+ C+ +++ A L +M+ +G
Sbjct: 608 LMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKG 667
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
A +NS+I + K A ++ + MR+ G + Y + G E
Sbjct: 668 FSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTL 727
Query: 429 EILNEA 434
E+ +EA
Sbjct: 728 ELCDEA 733
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 154/327 (47%), Gaps = 5/327 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+++L CSS KE ++ G E V+T N L+ K G+ A ++F+
Sbjct: 270 NSILHGYCSSEQPKEAIGFLKKMRSDG-VEPDVVTY---NSLMDYLCKNGRSTEARKIFD 325
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G + TY ++ + + ++ + M+ G PD +I + K
Sbjct: 326 SMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQE 385
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
K EA +V++ R+ + P +I LC+ +V A+ + E I +
Sbjct: 386 KVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSG-SVDDAMLYFEQMIDEGLTPNIIVY 444
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+S+I SLC A+ L+ +M+ G FNS+I ++ K G + + ++ LM
Sbjct: 445 TSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVR 504
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+KP+V TY+ L+ GY G+M+EA ++L+ + VTY+TLI GYC++ D
Sbjct: 505 IGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDD 564
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSL 488
AL L EM GV PN+ YN ++Q L
Sbjct: 565 ALALFKEMVSSGVSPNIITYNIILQGL 591
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 139/304 (45%), Gaps = 15/304 (4%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G + + I A ++++ D A V KM + G P+ G +I CK G +A
Sbjct: 366 GIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDA 425
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLC---QEDETVKLALDMLDDFSGEARKYAIKP--F 341
+ + ++ + P V LI SLC + D+ +L L+MLD R + F
Sbjct: 426 MLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLD------RGICLNTIFF 479
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+S+I S C+ V ++ L M+ G P ++++I Y AG M A ++L M S
Sbjct: 480 NSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFS 539
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+KPD TY L++GY +M++A + E + + +TY+ +++G
Sbjct: 540 VGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAA 599
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD---WRTAEKL-LEDMRLKGLHLNGITR 517
A +L + G Q + YN ++ LC L R + L L D++L+ N +
Sbjct: 600 AKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 659
Query: 518 ALIR 521
AL++
Sbjct: 660 ALLK 663
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 136/307 (44%), Gaps = 5/307 (1%)
Query: 212 KGKAAFEVFNKFGD---YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSE 268
+ + A E+ + D G + +Y I + D A+S +M++ PD
Sbjct: 173 RSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVV 232
Query: 269 KVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDD 328
II+ CKG +A V T + + P ++ C ++ K A+ L
Sbjct: 233 TYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQP-KEAIGFLKK 291
Query: 329 FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD 388
+ + + ++S++ LC+ A+ + M G P A + +++ Y+ G
Sbjct: 292 MRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGA 351
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHT 448
+ +L LM G+ PD + + L+ YA +++EA + ++ +++ + VTY
Sbjct: 352 LVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGA 411
Query: 449 LIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLK 508
+I CK D A+ +M D G+ PN+ Y LI SLC+ W AE+L+ +M +
Sbjct: 412 VIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFD-KWDKAEELILEMLDR 470
Query: 509 GLHLNGI 515
G+ LN I
Sbjct: 471 GICLNTI 477
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 113/298 (37%), Gaps = 15/298 (5%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I + K G A F + D G N Y I +L +D A + +M++ G
Sbjct: 412 VIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRG 471
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC---QEDETV 319
++ II CK G+ E+ ++ L + P + LI C + DE
Sbjct: 472 ICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEAT 531
Query: 320 KLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
KL M +KP ++++I CR+ + A L +M+S G P
Sbjct: 532 KLLSSMF--------SVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIIT 583
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N ++ A E+ + G + ++ TY ++ G +EA +
Sbjct: 584 YNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 643
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
+L T++ +I K+ D A L G+ PN Y + +++ + L
Sbjct: 644 LTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGL 701
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 50/270 (18%), Positives = 100/270 (37%), Gaps = 11/270 (4%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEK--EKGV-LTVEILNELIALFSKLGKGKAA 216
V +L+ ++C ++ WD +E+ + ++G+ L N +I K G+ +
Sbjct: 443 VYTSLIHSLC-------IFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIES 495
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
++F+ G N TY I+ D A + M G PD +I+
Sbjct: 496 EKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLING 555
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
+C+ + +A ++ + P ++ L T A ++ + +
Sbjct: 556 YCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAA-AKELYVGITKSGTQL 614
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ ++ ++ LC+ A + + FN +I A K G A ++
Sbjct: 615 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLF 674
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
S GL P+ +TY + G +EE
Sbjct: 675 VAFSSNGLVPNYWTYRLMAENIIGQGLLEE 704
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 143/295 (48%), Gaps = 5/295 (1%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V LN LI F L + AF V K GC + T+ I L A + +
Sbjct: 185 VYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFD 244
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQ 314
K I G PD G +++ CK G A + +K P +V+A+ +I SLC+
Sbjct: 245 KTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRP--NVIAYNTIIDSLCK 302
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
D V A ++ + + I ++S+I +LC + + TLL++M++ P
Sbjct: 303 -DRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVV 361
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
VF++V+ A K G + A +++ +M RG++PDV TYT LM G+ +M+EA ++ +
Sbjct: 362 VFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTM 421
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ +Y+ LI GYC+++ D A+ LL +M G+ + YN LI LC
Sbjct: 422 VHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLC 476
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 163/402 (40%), Gaps = 48/402 (11%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEK-EKGVLTVEILNELIALFSKLGKGKAAFEVF 220
+ L++ +C E L+D K IGE + V+T L+ K+G AA +
Sbjct: 224 NTLIRGLCVEGKIGEALHLFD--KTIGEGFQPDVVTY---GTLMNGLCKVGNTSAAIRLL 278
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
C N Y I++L + + A+++ +MI G PD +I C
Sbjct: 279 RSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNL 338
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
+ K + K+ P V + ++ +LC+E + +A D++D + +
Sbjct: 339 CEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEG-MIAIAHDVVDMMIKRGVEPDVVT 397
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+++++ C ++ A + M+ +G P +N +I+ Y + M AM +L+ M
Sbjct: 398 YTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMS 457
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK-------------------KNH--- 438
+GL D TY L+ G + G+++ A + +E KNH
Sbjct: 458 LQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLA 517
Query: 439 -----------SRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
S L + Y+ I G C+ E + A L + + G+QP+V YN +I
Sbjct: 518 EAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMI 577
Query: 486 QSLCLKALDWRTAEKLLEDMRLKGLHLNG-----ITRALIRA 522
LC + L A KL M G +G I R +R+
Sbjct: 578 HGLCKRGL-LDEANKLFRKMDENGCSRDGCIYNTIIRGFLRS 618
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 8/216 (3%)
Query: 294 REKKMYPPQSVVAF--LISSLCQEDE--TVKLALDMLDDFSGEARKYAIKPFSSVIRSLC 349
R M+PP S V F L++S+ + TV +D F Y + + +I S C
Sbjct: 140 RMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL---NILINSFC 196
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
++ + A ++L+K++ G P N FN++I G + A+ + G +PDV
Sbjct: 197 HLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVV 256
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
TY LM+G G A +L + + R + + Y+T+I CK + A L +EM
Sbjct: 257 TYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEM 316
Query: 470 KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
G+ P++ YN LI +LC +W+ LL +M
Sbjct: 317 ITKGISPDIFTYNSLIHALC-NLCEWKHVTTLLNEM 351
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 134/316 (42%), Gaps = 43/316 (13%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
+ ++++ K + S+ +M G PD + +I+ FC + A V +
Sbjct: 157 LTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGC 216
Query: 299 YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
P + LI LC E + + AL + D GE + + + +++ LC++ + A
Sbjct: 217 QPDNTTFNTLIRGLCVEGK-IGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAI 275
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
LL M+ + P +N++I + K +T A + M ++G+ PD++TY L+
Sbjct: 276 RLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHAL 335
Query: 419 ANGGQMEEACEILNEAKKNHSRLSP----------------------------------- 443
N + + +LNE +S++ P
Sbjct: 336 CNLCEWKHVTTLLNEMV--NSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEP 393
Query: 444 --VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC-LKALDWRTAEK 500
VTY L+ G+C E D A+K+ + M G PNV YN LI C ++ +D A
Sbjct: 394 DVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMD--KAMG 451
Query: 501 LLEDMRLKGLHLNGIT 516
LLE M L+GL + +T
Sbjct: 452 LLEQMSLQGLIADTVT 467
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 140/357 (39%), Gaps = 48/357 (13%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI L + K + N+ + + N + ++AL + + A V + MI+
Sbjct: 329 NSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIK 388
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD ++ C + EA V+ K P LI+ CQ K
Sbjct: 389 RGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDK 448
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA------ 374
A+ +L+ S + ++++I LC + + A L +M++ G P
Sbjct: 449 -AMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILL 507
Query: 375 -----------------------------VFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
V+N I +AG++ A ++ + S+GL+
Sbjct: 508 DYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQ 567
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
PDV TY ++ G G ++EA ++ + +N Y+T+IRG+ + E A +L
Sbjct: 568 PDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQL 627
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG-------LHLNGI 515
L EM G +V +++ L LD E +RL+G LHL G+
Sbjct: 628 LQEMLAEGFSADVSTTTLIVEMLSDDGLDQS-----FERLRLRGVGEEDRELHLRGV 679
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 1/155 (0%)
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
++M+ PPP F ++++ +K + + + M S G+ PDVYT L++ + +
Sbjct: 138 FNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCH 197
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
++ A +L + K + T++TLIRG C + AL L ++ G QP+V
Sbjct: 198 LRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVT 257
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
Y L+ LC K + A +LL M K N I
Sbjct: 258 YGTLMNGLC-KVGNTSAAIRLLRSMVQKNCRPNVI 291
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 167/391 (42%), Gaps = 44/391 (11%)
Query: 152 FFKWVTSGVVDALLKAICSSVGKKEVY-ALWDIVKEIGEKEKGVLTVEILNELIALFSKL 210
F WVT +V +L K + + W I++E+ + + LIA ++K
Sbjct: 93 FRSWVTHNLVIDML-------AKDDGFDTYWKILEELKNSNIQI-PPPTFSVLIAAYAKS 144
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G + A E F K D+GC + TY + + ++++F A +V +M++ P+
Sbjct: 145 GMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATF 204
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET------------ 318
+++ CK GK +A ++ +K + P + ++S LCQ T
Sbjct: 205 VILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKV 264
Query: 319 ----------------------VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHG 356
+ A +L F E IK +SS+I L R K
Sbjct: 265 SGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDE 324
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
+ KM G P ++ +I + + G + A+ ML M RGL PD Y Y L+
Sbjct: 325 VQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIK 384
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
G+ + G +++A + E KN + TY LI G C+ D A ++ N+M+++G P
Sbjct: 385 GFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSP 444
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMRL 507
++ +N LI LC KA + A L M +
Sbjct: 445 SIMTFNALIDGLC-KAGELEEARHLFYKMEI 474
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 145/349 (41%), Gaps = 20/349 (5%)
Query: 158 SGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAF 217
S +ALL C E +AL ++ EKE VL ++ + LI + +
Sbjct: 271 SITCNALLDGFCKLGQIDEAFALL----QLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQ 326
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
E K G + Y I + D+A ++ M + G PD+ +I F
Sbjct: 327 EWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGF 386
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
C G +A + + +P LI +C+ + + A + + +
Sbjct: 387 CDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCR-NGLLDEARQIFNQMENLGCSPS 445
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKM-ISEGPP------------PGNAVFNSVISAYS 384
I F+++I LC+ ++ A+ L KM I + P A +++
Sbjct: 446 IMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLC 505
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK-KNHSRLSP 443
++G + A ++L + G+ PD+ TY L++G+ + A ++ E + K HS S
Sbjct: 506 ESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDS- 564
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
VTY TLI G+ +++ + A ++L++M G P+ Y L+ C K
Sbjct: 565 VTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKG 613
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 102/266 (38%), Gaps = 25/266 (9%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI F +G A + + C TY I + R + D A + +M
Sbjct: 380 NALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMEN 439
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEA-HVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
G P +I CK G+ +EA H+ Y KM ++ FL S
Sbjct: 440 LGCSPSIMTFNALIDGLCKAGELEEARHLFY------KMEIGKNPSLFLRLS-------- 485
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
G R +++ LC + A LL ++ G P +N +
Sbjct: 486 ----------QGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVL 535
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I+ + KA ++ A ++ + ++ +G PD TY L+ G+ + E+A +L++ KN
Sbjct: 536 INGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGC 595
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKL 465
S Y L+ C+ + A L
Sbjct: 596 TPSSAVYKCLMTWSCRKGKLSVAFSL 621
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 154/327 (47%), Gaps = 5/327 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+++L CSS KE ++ G E V+T N L+ K G+ A ++F+
Sbjct: 270 NSILHGYCSSEQPKEAIGFLKKMRSDG-VEPDVVTY---NSLMDYLCKNGRSTEARKIFD 325
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G + TY ++ + + ++ + M+ G PD +I + K
Sbjct: 326 SMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQE 385
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
K EA +V++ R+ + P +I LC+ +V A+ + E I +
Sbjct: 386 KVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSG-SVDDAMLYFEQMIDEGLTPNIIVY 444
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+S+I SLC A+ L+ +M+ G FNS+I ++ K G + + ++ LM
Sbjct: 445 TSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVR 504
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+KP+V TY+ L+ GY G+M+EA ++L+ + VTY+TLI GYC++ D
Sbjct: 505 IGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDD 564
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSL 488
AL L EM GV PN+ YN ++Q L
Sbjct: 565 ALALFKEMVSSGVSPNIITYNIILQGL 591
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 139/304 (45%), Gaps = 15/304 (4%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G + + I A ++++ D A V KM + G P+ G +I CK G +A
Sbjct: 366 GIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDA 425
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLC---QEDETVKLALDMLDDFSGEARKYAIKP--F 341
+ + ++ + P V LI SLC + D+ +L L+MLD R + F
Sbjct: 426 MLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLD------RGICLNTIFF 479
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+S+I S C+ V ++ L M+ G P ++++I Y AG M A ++L M S
Sbjct: 480 NSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFS 539
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+KPD TY L++GY +M++A + E + + +TY+ +++G
Sbjct: 540 VGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAA 599
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD---WRTAEKL-LEDMRLKGLHLNGITR 517
A +L + G Q + YN ++ LC L R + L L D++L+ N +
Sbjct: 600 AKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 659
Query: 518 ALIR 521
AL++
Sbjct: 660 ALLK 663
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 136/307 (44%), Gaps = 5/307 (1%)
Query: 212 KGKAAFEVFNKFGD---YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSE 268
+ + A E+ + D G + +Y I + D A+S +M++ PD
Sbjct: 173 RSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVV 232
Query: 269 KVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDD 328
II+ CKG +A V T + + P ++ C ++ K A+ L
Sbjct: 233 TYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQP-KEAIGFLKK 291
Query: 329 FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD 388
+ + + ++S++ LC+ A+ + M G P A + +++ Y+ G
Sbjct: 292 MRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGA 351
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHT 448
+ +L LM G+ PD + + L+ YA +++EA + ++ +++ + VTY
Sbjct: 352 LVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGA 411
Query: 449 LIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLK 508
+I CK D A+ +M D G+ PN+ Y LI SLC+ W AE+L+ +M +
Sbjct: 412 VIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFD-KWDKAEELILEMLDR 470
Query: 509 GLHLNGI 515
G+ LN I
Sbjct: 471 GICLNTI 477
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 114/293 (38%), Gaps = 15/293 (5%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I + K G A F + D G N Y I +L +D A + +M++ G
Sbjct: 412 VIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRG 471
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC---QEDETV 319
++ II CK G+ E+ ++ L + P + LI C + DE
Sbjct: 472 ICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEAT 531
Query: 320 KLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
KL M +KP ++++I CR+ + A L +M+S G P
Sbjct: 532 KLLSSMF--------SVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIIT 583
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N ++ A E+ + G + ++ TY ++ G +EA +
Sbjct: 584 YNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 643
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+L T++ +I K+ D A L + G+ P+V Y+ + ++L
Sbjct: 644 LTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENL 696
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/256 (18%), Positives = 97/256 (37%), Gaps = 11/256 (4%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEK--EKGV-LTVEILNELIALFSKLGKGKAA 216
V +L+ ++C ++ WD +E+ + ++G+ L N +I K G+ +
Sbjct: 443 VYTSLIHSLC-------IFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIES 495
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
++F+ G N TY I+ D A + M G PD +I+
Sbjct: 496 EKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLING 555
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
+C+ + +A ++ + P ++ L T A ++ + +
Sbjct: 556 YCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAA-AKELYVGITKSGTQL 614
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ ++ ++ LC+ A + + FN +I A K G A ++
Sbjct: 615 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLF 674
Query: 397 KLMRSRGLKPDVYTYT 412
+ + GL PDV TY+
Sbjct: 675 AALSANGLVPDVRTYS 690
>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 167/391 (42%), Gaps = 44/391 (11%)
Query: 152 FFKWVTSGVVDALLKAICSSVGKKEVY-ALWDIVKEIGEKEKGVLTVEILNELIALFSKL 210
F WVT +V +L K + + W I++E+ + + LIA ++K
Sbjct: 93 FRSWVTHNLVIDML-------AKDDGFDTYWKILEELKNSNIQI-PPPTFSVLIAAYAKS 144
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G + A E F K D+GC + TY + + ++++F A +V +M++ P+
Sbjct: 145 GMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATF 204
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET------------ 318
+++ CK GK +A ++ +K + P + ++S LCQ T
Sbjct: 205 VILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKV 264
Query: 319 ----------------------VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHG 356
+ A +L F E IK +SS+I L R K
Sbjct: 265 SGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDE 324
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
+ KM G P ++ +I + + G + A+ ML M RGL PD Y Y L+
Sbjct: 325 VQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIK 384
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
G+ + G +++A + E KN + TY LI G C+ D A ++ N+M+++G P
Sbjct: 385 GFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSP 444
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMRL 507
++ +N LI LC KA + A L M +
Sbjct: 445 SIMTFNALIDGLC-KAGELEEARHLFYKMEI 474
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 83/432 (19%), Positives = 149/432 (34%), Gaps = 82/432 (18%)
Query: 158 SGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAF 217
S +ALL C E +AL ++ EKE VL ++ + LI + +
Sbjct: 271 SITCNALLDGFCKLGQIDEAFALL----QLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQ 326
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
E K G + Y I + D+A ++ M + G PD+ +I F
Sbjct: 327 EWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGF 386
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
C G +A + + +P LI +C+ + + A + + +
Sbjct: 387 CDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCR-NGLLDEARQIFNQMENLGCSPS 445
Query: 338 IKPFSSVIRSLCRMKDVHGAKTL------------------------------------- 360
I F+++I LC+ ++ A+ L
Sbjct: 446 IMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTANGFHRVDREE 505
Query: 361 -----LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM-LKLMRSRGLKPD------- 407
L +M+ G P +AV+ +++ + G ++ A + LK +RS + D
Sbjct: 506 DAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAE 565
Query: 408 --------------------------VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
+ YT + G + EEA +I K+ +
Sbjct: 566 EHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDV 625
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+P + LI G CK + A+ + + G N+L++SL L+ + A L
Sbjct: 626 NPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQD-KMKHALDL 684
Query: 502 LEDMRLKGLHLN 513
L M G L+
Sbjct: 685 LNRMNSAGYDLD 696
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 132/301 (43%), Gaps = 1/301 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI +K GK A+++F + D G + TY I + D A + + M G
Sbjct: 191 LIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKG 250
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P +I CK GK EA + + P + LIS LC V A
Sbjct: 251 CRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIAR-VDDA 309
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+L+D K + +++I LC+ + A+ +L M+S G P +N+++
Sbjct: 310 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 369
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ +AG A E+L M +RGL P+V TYT L+SG ++ EAC + + K + +
Sbjct: 370 HCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPN 429
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
TY LI G+C + D LKL EM G+ P+ Y L LC R E L
Sbjct: 430 LFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILR 489
Query: 503 E 503
E
Sbjct: 490 E 490
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 148/335 (44%), Gaps = 20/335 (5%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A E+F GC + TY I+A +R + + A + +KMIE G +PD ++
Sbjct: 64 ARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMD 123
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDM-LDDFSG 331
CK + +EA +++ P + +I LCQ+ D+ ++ +M D
Sbjct: 124 GLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPP 183
Query: 332 EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
++ Y I +I L + ++ A L +M+ G P +N VI A +
Sbjct: 184 DSWSYGI-----LIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDE 238
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
A+E+ K MRS+G +P +T+ L+ + G+++EA +L + VTY TLI
Sbjct: 239 ALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLIS 298
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG-- 509
G C + D A LL +M +P V N LI LC KA + A ++L+ M G
Sbjct: 299 GLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLC-KAGRIKEAREVLDAMVSSGQS 357
Query: 510 ---LHLNGITRALIRA-----VKELEEDAIENGEA 536
+ N + RA +EL D + G A
Sbjct: 358 PDVVTYNTLVHGHCRAGQTERARELLSDMVARGLA 392
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/389 (21%), Positives = 157/389 (40%), Gaps = 49/389 (12%)
Query: 155 WVTSGVVDALLKAICSSVGK-KEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKG 213
W ++D L KA GK E Y L+ + + G V +++ + ++
Sbjct: 186 WSYGILIDGLAKA-----GKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTL---- 236
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
A E+F GC ++ T+ I+A +R D A+ + ++M + G +PD +
Sbjct: 237 DEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTL 296
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEA 333
IS C + +A + +++ P LI LC+ +K A ++LD
Sbjct: 297 ISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGR-IKEAREVLDAMVSSG 355
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
+ + +++++ CR A+ LLS M++ G P + +++S KA + A
Sbjct: 356 QSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEAC 415
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQME---------------------------- 425
+ M+S G P+++TYT L+ G+ + GQ++
Sbjct: 416 GVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAEL 475
Query: 426 -------EACEILNEAKKN--HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
A EIL E +++ Y + G + + + AL + +M G P
Sbjct: 476 CKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLP 535
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
+ L+ LC K+ A +LE++
Sbjct: 536 APERCASLVAGLC-KSGQGGEARAVLEEI 563
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 110/252 (43%), Gaps = 2/252 (0%)
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M E PDS G +I K GK +A ++ + P LI LC +
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMAN- 59
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
+ A ++ D + + ++ +I + C+ + A L+ KMI +G P +N
Sbjct: 60 SFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYN 119
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+V+ K+ + A+ + M G P+ ++ ++ G ++++AC++ +E +
Sbjct: 120 TVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAK 179
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
+Y LI G K + + A KL M D G+ P+ YN +I +CL A
Sbjct: 180 DIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCL-AYTLDE 238
Query: 498 AEKLLEDMRLKG 509
A +L + MR KG
Sbjct: 239 ALELFKSMRSKG 250
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 1/180 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++S+I LC A+ L + M G PP +N +I A K G + A +++K M
Sbjct: 48 YTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMI 107
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G PDV TY +M G ++EEA + NE ++ + +++T+I G C+ + D
Sbjct: 108 EDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKID 167
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
A ++ +EM+ + P+ Y LI L KA A KL + M G+ + +T ++
Sbjct: 168 QACQVFHEMEAKDIPPDSWSYGILIDGLA-KAGKLNEAYKLFQRMLDSGITPSAVTYNVV 226
>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 909
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 168/331 (50%), Gaps = 5/331 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ +C ++ +E + +++ IG V L+ F ++ + + A + +
Sbjct: 260 NVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV----TYRTLVYGFCRMEELEMALRITH 315
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G V ++ F I+ L ++++ + A+S+ K+ + G +P+ +I CK
Sbjct: 316 DMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNE 375
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ +A ++ + + P + A LI +LC+ ++ AL + D + K + P+
Sbjct: 376 RFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRG-MIEDALCLFDKMRDKGIKVTVYPY 434
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+S+I C+ + A+ LLS M+ EG P A ++ +I+ + GD++ ME+ + M
Sbjct: 435 NSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAE 494
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
RG+ + YT+T L++G+ +M+EA + ++ ++ + VT++ +I GYC +
Sbjct: 495 RGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRK 554
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
A +L ++M ++G++P+ Y LI LCL +
Sbjct: 555 AFQLYDQMVEMGLKPDNYTYRSLISGLCLTS 585
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 149/331 (45%), Gaps = 5/331 (1%)
Query: 205 ALFSKLGKGKA---AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET 261
AL KL K + A +F + G N+ TY I AL +R + + A + +KM +
Sbjct: 366 ALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDK 425
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
G +I+ +CK G A + + ++ + P + + LI+ LC+ + +
Sbjct: 426 GIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGD-LSS 484
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
+++ + + + F+++I C+ K + A L KMI P FN +I
Sbjct: 485 CMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIE 544
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
Y G++ A ++ M GLKPD YTY L+SG + +A E + + + +++ L
Sbjct: 545 GYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVL 604
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+ + L+ G+ + F L +EM GV+ ++ + ++ + LK D + L
Sbjct: 605 NNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYA-ALKQHDKEKSCVL 663
Query: 502 LEDMRLKGLHLNGITRALIRAVKELEEDAIE 532
+M+ +G+ + I + EE+ I+
Sbjct: 664 FREMKEQGVKPDDIFYTCMIDALSKEENMIQ 694
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 105/228 (46%), Gaps = 39/228 (17%)
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
S ++ SL +++ A+ L KM+ G V+ + I AY ++ ++ A ++ M S
Sbjct: 190 SQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMES 249
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+K Y LM G +++EA E+ N VTY TL+ G+C++EE +
Sbjct: 250 EGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEM 309
Query: 462 ALKLLNEM-----------------------------------KDVGVQPNVDEYNKLIQ 486
AL++ ++M D+G+ PNV YN LI
Sbjct: 310 ALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALID 369
Query: 487 SLCLKALDWRTAEKLLEDMRLKGLHLNGITRA-LIRAV--KELEEDAI 531
LC K + A++L ++M +GL N +T A LI A+ + + EDA+
Sbjct: 370 KLC-KNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDAL 416
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 135/342 (39%), Gaps = 6/342 (1%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
L+ A+C ++ L+D +++ G K +TV N LI + K G A + +
Sbjct: 402 LIHALCKRGMIEDALCLFDKMRDKGIK----VTVYPYNSLINGYCKQGSLDRARGLLSGM 457
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
G +Y I L R + +M E G ++ +I+ FCK K
Sbjct: 458 VKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKM 517
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
EA ++ + + P + +I C ++ A + D K + S
Sbjct: 518 DEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVG-NIRKAFQLYDQMVEMGLKPDNYTYRS 576
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
+I LC V A ++ + + N +++ + + G T + M RG
Sbjct: 577 LISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRG 636
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
+K D+ ++T ++ E++C + E K+ + + Y +I K E AL
Sbjct: 637 VKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQAL 696
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
++M G PN + LI +LC K+ +AE L ++M
Sbjct: 697 NCWDQMVVDGYSPNTVTHTVLINNLC-KSGYLGSAELLCKEM 737
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 129/318 (40%), Gaps = 47/318 (14%)
Query: 176 EVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKG--KAAFEVFNKFGDYGCVANQE 233
E Y LWD + G K +++++ I +++ L + + + +F + + G +
Sbjct: 624 ETYHLWDEMAVRGVK------LDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDI 677
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
Y I+ALS+ + A + ++M+ G P++ +I+ CK G A ++
Sbjct: 678 FYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEM 737
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
+ P + + E + K A D L + +I F+ +I+ LC+
Sbjct: 738 LAGNVLPNKFTYNCFLDYFATEGDMEK-AKD-LHSAMLQGHLASIVSFNILIKGLCKAGK 795
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
+ A L+SK+ G P ++++I K GD+ A E+ M +GLKPDV
Sbjct: 796 IQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDV----- 850
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE-EFDCALKLLNEMKDV 472
V Y+ IR +C + E D AL + M
Sbjct: 851 ------------------------------VAYNIFIR-WCNVHGESDKALGIYTNMIRS 879
Query: 473 GVQPNVDEYNKLIQSLCL 490
GVQPN D Y L+ + L
Sbjct: 880 GVQPNWDTYRALLSGISL 897
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 94/225 (41%), Gaps = 36/225 (16%)
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
LA D+ D +++ IR+ C +++ GA+ L+ +M SEG +N ++
Sbjct: 204 LARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLM 263
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC------------ 428
K + A+E+ +M + G+ D TY L+ G+ ++E A
Sbjct: 264 YGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFV 323
Query: 429 ----------------EILNEAKKNHSRLSPV-------TYHTLIRGYCKLEEFDCALKL 465
E++ EA +L + Y+ LI CK E FD A +L
Sbjct: 324 PSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRL 383
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
EM G++PN Y LI +LC + + A L + MR KG+
Sbjct: 384 FKEMAGRGLEPNEVTYAILIHALCKRGM-IEDALCLFDKMRDKGI 427
>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
Length = 1003
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 168/331 (50%), Gaps = 5/331 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ +C ++ +E + +++ IG V L+ F ++ + + A + +
Sbjct: 237 NVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV----TYRTLVYGFCRMEELEMALRITH 292
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G V ++ F I+ L ++++ + A+S+ K+ + G +P+ +I CK
Sbjct: 293 DMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNE 352
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ +A ++ + + P + A LI +LC+ ++ AL + D + K + P+
Sbjct: 353 RFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRG-MIEDALCLFDKMRDKGIKVTVYPY 411
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+S+I C+ + A+ LLS M+ EG P A ++ +I+ + GD++ ME+ + M
Sbjct: 412 NSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAE 471
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
RG+ + YT+T L++G+ +M+EA + ++ ++ + VT++ +I GYC +
Sbjct: 472 RGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRK 531
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
A +L ++M ++G++P+ Y LI LCL +
Sbjct: 532 AFQLYDQMVEMGLKPDNYTYRSLISGLCLTS 562
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 149/331 (45%), Gaps = 5/331 (1%)
Query: 205 ALFSKLGKGKA---AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET 261
AL KL K + A +F + G N+ TY I AL +R + + A + +KM +
Sbjct: 343 ALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDK 402
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
G +I+ +CK G A + + ++ + P + + LI+ LC+ + +
Sbjct: 403 GIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGD-LSS 461
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
+++ + + + F+++I C+ K + A L KMI P FN +I
Sbjct: 462 CMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIE 521
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
Y G++ A ++ M GLKPD YTY L+SG + +A E + + + +++ L
Sbjct: 522 GYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVL 581
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+ + L+ G+ + F L +EM GV+ ++ + ++ + LK D + L
Sbjct: 582 NNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYA-ALKQHDKEKSCVL 640
Query: 502 LEDMRLKGLHLNGITRALIRAVKELEEDAIE 532
+M+ +G+ + I + EE+ I+
Sbjct: 641 FREMKEQGVKPDDIFYTCMIDALSKEENMIQ 671
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 105/228 (46%), Gaps = 39/228 (17%)
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
S ++ SL +++ A+ L KM+ G V+ + I AY ++ ++ A ++ M S
Sbjct: 167 SQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMES 226
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+K Y LM G +++EA E+ N VTY TL+ G+C++EE +
Sbjct: 227 EGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEM 286
Query: 462 ALKLLNEM-----------------------------------KDVGVQPNVDEYNKLIQ 486
AL++ ++M D+G+ PNV YN LI
Sbjct: 287 ALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALID 346
Query: 487 SLCLKALDWRTAEKLLEDMRLKGLHLNGITRA-LIRAV--KELEEDAI 531
LC K + A++L ++M +GL N +T A LI A+ + + EDA+
Sbjct: 347 KLC-KNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDAL 393
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 135/342 (39%), Gaps = 6/342 (1%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
L+ A+C ++ L+D +++ G K +TV N LI + K G A + +
Sbjct: 379 LIHALCKRGMIEDALCLFDKMRDKGIK----VTVYPYNSLINGYCKQGSLDRARGLLSGM 434
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
G +Y I L R + +M E G ++ +I+ FCK K
Sbjct: 435 VKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKM 494
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
EA ++ + + P + +I C ++ A + D K + S
Sbjct: 495 DEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVG-NIRKAFQLYDQMVEMGLKPDNYTYRS 553
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
+I LC V A ++ + + N +++ + + G T + M RG
Sbjct: 554 LISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRG 613
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
+K D+ ++T ++ E++C + E K+ + + Y +I K E AL
Sbjct: 614 VKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQAL 673
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
++M G PN + LI +LC K+ +AE L ++M
Sbjct: 674 NCWDQMVVDGYSPNTVTHTVLINNLC-KSGYLGSAELLCKEM 714
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 129/318 (40%), Gaps = 47/318 (14%)
Query: 176 EVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKG--KAAFEVFNKFGDYGCVANQE 233
E Y LWD + G K +++++ I +++ L + + + +F + + G +
Sbjct: 601 ETYHLWDEMAVRGVK------LDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDI 654
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
Y I+ALS+ + A + ++M+ G P++ +I+ CK G A ++
Sbjct: 655 FYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEM 714
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
+ P + + E + K A D L + +I F+ +I+ LC+
Sbjct: 715 LAGNVLPNKFTYNCFLDYFATEGDMEK-AKD-LHSAMLQGHLASIVSFNILIKGLCKAGK 772
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
+ A L+SK+ G P ++++I K GD+ A E+ M +GLKPDV
Sbjct: 773 IQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDV----- 827
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE-EFDCALKLLNEMKDV 472
V Y+ IR +C + E D AL + M
Sbjct: 828 ------------------------------VAYNIFIR-WCNVHGESDKALGIYTNMIRS 856
Query: 473 GVQPNVDEYNKLIQSLCL 490
GVQPN D Y L+ + L
Sbjct: 857 GVQPNWDTYRALLSGISL 874
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 94/225 (41%), Gaps = 36/225 (16%)
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
LA D+ D +++ IR+ C +++ GA+ L+ +M SEG +N ++
Sbjct: 181 LARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLM 240
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC------------ 428
K + A+E+ +M + G+ D TY L+ G+ ++E A
Sbjct: 241 YGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFV 300
Query: 429 ----------------EILNEAKKNHSRLSPV-------TYHTLIRGYCKLEEFDCALKL 465
E++ EA +L + Y+ LI CK E FD A +L
Sbjct: 301 PSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRL 360
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
EM G++PN Y LI +LC + + A L + MR KG+
Sbjct: 361 FKEMAGRGLEPNEVTYAILIHALCKRGM-IEDALCLFDKMRDKGI 404
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 1/141 (0%)
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
+S G + ++ + K A ++ M G+ D Y YT + Y +
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
+ A ++ + + S V Y+ L+ G CK A+++ N M ++GV + Y L
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274
Query: 485 IQSLCLKALDWRTAEKLLEDM 505
+ C + + A ++ DM
Sbjct: 275 VYGFC-RMEELEMALRITHDM 294
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 132/301 (43%), Gaps = 1/301 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI +K GK A+++F + D G + TY I + D A + + M G
Sbjct: 191 LIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKG 250
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P +I CK GK EA + + P + LIS LC V A
Sbjct: 251 CRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIAR-VDDA 309
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+L+D K + +++I LC+ + A+ +L M+S G P +N+++
Sbjct: 310 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 369
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ +AG A E+L M +RGL P+V TYT L+SG ++ EAC + + K + +
Sbjct: 370 HCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPN 429
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
TY LI G+C + D LKL EM G+ P+ Y L LC R E L
Sbjct: 430 LFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILR 489
Query: 503 E 503
E
Sbjct: 490 E 490
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 149/335 (44%), Gaps = 20/335 (5%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A E+F GC + TY I+A +R + + A + +KMIE G +PD ++
Sbjct: 64 ARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMD 123
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDM-LDDFSG 331
CK G+ +EA +++ P + +I LCQ+ D+ ++ +M D
Sbjct: 124 GLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPP 183
Query: 332 EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
++ Y I +I L + ++ A L +M+ G P +N VI A +
Sbjct: 184 DSWSYGI-----LIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDE 238
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
A+E+ K MRS+G +P +T+ L+ + G+M+EA +L + VTY TLI
Sbjct: 239 ALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLIS 298
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG-- 509
G C + D A LL +M +P V N LI LC KA + A ++L+ M G
Sbjct: 299 GLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLC-KAGRIKEAREVLDAMVSSGQS 357
Query: 510 ---LHLNGITRALIRA-----VKELEEDAIENGEA 536
+ N + RA +EL D + G A
Sbjct: 358 PDVVTYNTLVHGHCRAGQTERARELLSDMVARGLA 392
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/389 (21%), Positives = 156/389 (40%), Gaps = 49/389 (12%)
Query: 155 WVTSGVVDALLKAICSSVGK-KEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKG 213
W ++D L KA GK E Y L+ + + G V +++ + ++
Sbjct: 186 WSYGILIDGLAKA-----GKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTL---- 236
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
A E+F GC ++ T+ I+A +R D A+ + ++M + G +PD +
Sbjct: 237 DEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTL 296
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEA 333
IS C + +A + +++ P LI LC+ +K A ++LD
Sbjct: 297 ISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGR-IKEAREVLDAMVSSG 355
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
+ + +++++ CR A+ LLS M++ G P + +++S KA + A
Sbjct: 356 QSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEAC 415
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQME---------------------------- 425
+ M+S G P+++TYT L+ G+ + GQ++
Sbjct: 416 GVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAEL 475
Query: 426 -------EACEILNEAKKN--HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
A EIL E +++ Y + G + + AL + +M G P
Sbjct: 476 CKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLP 535
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
+ L+ LC K+ A +LE++
Sbjct: 536 APERCASLVAGLC-KSGQGGEARAVLEEI 563
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 111/252 (44%), Gaps = 2/252 (0%)
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M E PDS G +I K GK +A ++ + P LI LC +
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMAN- 59
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
+ A ++ D + + ++ +I + C+ + A L+ KMI +G P +N
Sbjct: 60 SFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYN 119
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+V+ K+G + A+ + M G P+ ++ ++ G ++++AC++ +E +
Sbjct: 120 TVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAR 179
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
+Y LI G K + + A KL M D G+ P+ YN +I +CL A
Sbjct: 180 DIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCL-AYTLDE 238
Query: 498 AEKLLEDMRLKG 509
A +L + MR KG
Sbjct: 239 ALELFKSMRSKG 250
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 86/176 (48%), Gaps = 1/176 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++S+I LC A+ L + M G PP +N +I A K G + A +++K M
Sbjct: 48 YTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMI 107
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G PDV TY +M G G++EEA + NE ++ + +++T+I G C+ + D
Sbjct: 108 EDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKID 167
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A ++ +EM+ + P+ Y LI L KA A KL M G+ + +T
Sbjct: 168 QACQVFHEMEARDIPPDSWSYGILIDGLA-KAGKLNEAYKLFRRMLDSGITPSAVT 222
>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
Length = 970
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 163/356 (45%), Gaps = 14/356 (3%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ +C G E + ++E G KE V L+ F ++ + + N
Sbjct: 257 NVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCT----LVLGFCRVQQFDDGICLMN 312
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ + G V + ++ L ++ D A+ + K+ G LP+ +I+ CKG
Sbjct: 313 EMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGE 372
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSG----EARKYA 337
+A ++Y + + LI S C+ LD+ + + G + +
Sbjct: 373 DLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRG-----MLDVAESYFGRMIEDGIRET 427
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
I P++S+I C+ D+ A+ L +KMI+EG P F ++IS Y K + A ++ +
Sbjct: 428 IYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYR 487
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M + + P VYT+T L+ G + +M EA ++ +E + + + VTY+ +I GYCK
Sbjct: 488 EMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAH 547
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
D A +LL +M G+ P+ Y LI LC A+ ++D+ K L LN
Sbjct: 548 NMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTG-RVSAAKDFIDDLHKKNLKLN 602
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 158/355 (44%), Gaps = 12/355 (3%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVL-TVEILNELIALFSKLGKGKA 215
SG+VD L K K + + +D+V ++G G L + + N LI K
Sbjct: 326 VSGLVDGLRK-------KGNIDSAYDLVVKLGRF--GFLPNLFVYNALINALCKGEDLDK 376
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A ++ N TY I++ +R + D A S +MIE G +I+
Sbjct: 377 AELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLIN 436
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
CK G A +YT + + P + LIS C+ D V+ A + + + +
Sbjct: 437 GHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCK-DLQVEKAFKLYREMNEKEIA 495
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
++ F+++I LC ++ A L +M+ P +N +I Y KA +M A E+
Sbjct: 496 PSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFEL 555
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
L+ M GL PD YTY L+SG + G++ A + +++ K + +L+ + Y L+ GYC
Sbjct: 556 LEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCG 615
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
AL EM G+ ++ + LI +K D + LL+ M +GL
Sbjct: 616 QGRLTEALSASCEMIQRGINMDLVCHAVLIDG-AMKQQDMKRLFGLLKKMYDQGL 669
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 163/398 (40%), Gaps = 40/398 (10%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA 216
T+ L+ C + ++ + L+ +E+ EKE +V LI + A
Sbjct: 462 TATTFTTLISGYCKDLQVEKAFKLY---REMNEKEIAP-SVYTFTALIYGLCSTNEMAEA 517
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
++F++ + + TY IE + D A+ + E M+ G +PD+ +IS
Sbjct: 518 SKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISG 577
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
C G+ A +K + + + L+ C + + AL +
Sbjct: 578 LCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTE-ALSASCEMIQRGINM 636
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ + +I + +D+ LL KM +G P + ++ S+I AYSK G + E L
Sbjct: 637 DLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECL 696
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI-------------------------- 430
LM + P+V TYT M+G G+++ A +
Sbjct: 697 DLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKE 756
Query: 431 --LNEAKKNHSRL------SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
+ EA H + + TY+ LIRG+CKL A K+L+EM + G+ P+ Y+
Sbjct: 757 GNMKEATDLHHEMLKGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYS 816
Query: 483 KLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
+I C ++ D A +L + M KG+ + + L+
Sbjct: 817 TIIYEHC-RSGDVGAAVELWDTMLRKGVEPDSVAFNLL 853
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 121/279 (43%), Gaps = 16/279 (5%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
+ L R + F W V ++ + G PD +I C + K+ + A+EK +
Sbjct: 190 LNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLC---ELKD----FCRAKEKIL 242
Query: 299 YPPQ-----SVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRM 351
+ S+V + LI LC+ ++ AL++ + K + + +++ CR+
Sbjct: 243 WMESNRFDLSIVTYNVLIHGLCKGGGVLE-ALEVRKSLREKGLKEDVVTYCTLVLGFCRV 301
Query: 352 KDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTY 411
+ L+++M+ G P A + ++ K G++ A +++ + G P+++ Y
Sbjct: 302 QQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVY 361
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
L++ G +++A + + L+ VTY LI +CK D A M +
Sbjct: 362 NALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIE 421
Query: 472 VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
G++ + YN LI C K D AE L M +GL
Sbjct: 422 DGIRETIYPYNSLINGHC-KFGDLSAAEFLYTKMINEGL 459
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 109/220 (49%), Gaps = 8/220 (3%)
Query: 296 KKMYP----PQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRM 351
KKMY P SV+ + ++ + K + + LD E + +++ + LC++
Sbjct: 662 KKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKV 721
Query: 352 KDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTY 411
++ A L KM++ P + + + + +K G+M A ++ M +GL + TY
Sbjct: 722 GEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEML-KGLLANTATY 780
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
L+ G+ G++ EA ++L+E +N +TY T+I +C+ + A++L + M
Sbjct: 781 NILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLR 840
Query: 472 VGVQPNVDEYNKLIQSLCLK-ALDWRTAEKLLEDMRLKGL 510
GV+P+ +N LI C+ ALD A +L DM +GL
Sbjct: 841 KGVEPDSVAFNLLIYGCCVNGALD--KAFELRNDMLSRGL 878
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 141/352 (40%), Gaps = 56/352 (15%)
Query: 205 ALFSKLGKGKAAFEVFNKFGDYGCVANQET-YYFTIEALSRRKIFDWAWSVCEKMIETGS 263
L + L K A FN G + + + T + + AL + K+F A S+ ++ GS
Sbjct: 68 VLINTLHDSKLALRFFNFLGLHKNMNHTTTSFAILVHALVQNKLFWPANSLLHTLLLRGS 127
Query: 264 LPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLAL 323
P + F + K+ TL + FL+ S Q A+
Sbjct: 128 DPKF-----VFEKFLES--HKQCKFSSTLGFD-----------FLVHSYLQNTRVFD-AV 168
Query: 324 DMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAY 383
+L G ++ S+++ L R++ + + ++ G P ++VI +
Sbjct: 169 VVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSL 228
Query: 384 SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
+ D A E + M S + TY L+ G GG + EA E+ ++ +
Sbjct: 229 CELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDV 288
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP----------------NVDE------- 480
VTY TL+ G+C++++FD + L+NEM ++G P N+D
Sbjct: 289 VTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVK 348
Query: 481 ------------YNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
YN LI +LC K D AE L ++M L LN +T +++
Sbjct: 349 LGRFGFLPNLFVYNALINALC-KGEDLDKAELLYKNMHSMNLPLNDVTYSIL 399
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 97/229 (42%), Gaps = 10/229 (4%)
Query: 252 WSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISS 311
+ + +KM + G PDS +I + K G K++ L +K +P ++
Sbjct: 658 FGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNG 717
Query: 312 LCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISE 367
LC+ E +D + I P + + SL + ++ A L +M+ +
Sbjct: 718 LCKVGE-----IDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEML-K 771
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G A +N +I + K G + A ++L M G+ PD TY+ ++ + G + A
Sbjct: 772 GLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAA 831
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
E+ + + V ++ LI G C D A +L N+M G++P
Sbjct: 832 VELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKP 880
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 1164
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 155/324 (47%), Gaps = 3/324 (0%)
Query: 194 VLTVEILNELIALFSK-LGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAW 252
VL+V+ N +A SK K A VF +F + G N +Y I + + + A
Sbjct: 630 VLSVDSCNVYLARLSKDCNKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAH 689
Query: 253 SVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSL 312
+ M G PD +I+ +C+ G+ + + ++K + P +I L
Sbjct: 690 HLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLL 749
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
C+ + + A + + G+ +++++ C+ D+ A +M S P
Sbjct: 750 CRICKLAE-AEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPD 808
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+ ++IS + + GDM A ++ M RGL+PD+ T+T LM+GY G +++A + N
Sbjct: 809 VLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHN 868
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
+ + VTY TLI G CK + D A +LL+EM +G+QPN+ YN ++ LC K+
Sbjct: 869 HMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC-KS 927
Query: 493 LDWRTAEKLLEDMRLKGLHLNGIT 516
+ A KL+ + GL+ + +T
Sbjct: 928 GNIEEAVKLVGEFEAAGLNADTVT 951
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 140/314 (44%), Gaps = 2/314 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I + + G+ +++ K G N TY I L R A +MI G
Sbjct: 710 VINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQG 769
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
LPD+ ++ FCK G + A + + + P +IS CQ + V+ A
Sbjct: 770 ILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE-A 828
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+ + + I F+ ++ C+ + A + + MI G P + ++I
Sbjct: 829 GKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDG 888
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
K GD+ A E+L M GL+P+++TY +++G G +EEA +++ E +
Sbjct: 889 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 948
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
VTY TL+ YCK E D A ++L EM G+QP + +N L+ CL + EKLL
Sbjct: 949 TVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGM-LEDGEKLL 1007
Query: 503 EDMRLKGLHLNGIT 516
M KG+ N T
Sbjct: 1008 NWMLAKGIAPNATT 1021
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 158/342 (46%), Gaps = 5/342 (1%)
Query: 176 EVYALWDIVKEIGEKEKGV-LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQET 234
E+ +W +++++ K+KG+ +I L ++ K A E F++ G + +
Sbjct: 719 ELDKVWKLIEKM--KQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIV 776
Query: 235 YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR 294
Y ++ +R A +M PD IIS FC+ G EA ++
Sbjct: 777 YTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEML 836
Query: 295 EKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDV 354
+ + P L++ C+ +K A + + + ++++I LC+ D+
Sbjct: 837 CRGLEPDIITFTELMNGYCKAGH-IKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 895
Query: 355 HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
A LL +M G P +NS+++ K+G++ A++++ + GL D TYT L
Sbjct: 896 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 955
Query: 415 MSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV 474
M Y G+M++A EIL E + + VT++ L+ G+C + KLLN M G+
Sbjct: 956 MDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 1015
Query: 475 QPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
PN +N L++ C++ + + A + +DM +G+ +G T
Sbjct: 1016 APNATTFNCLVKQYCIRN-NLKAATAIYKDMCSRGVEPDGKT 1056
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 168/369 (45%), Gaps = 19/369 (5%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEIL-NELIALFSKLGKGKA 215
T G + LL IC +E ++ + IG+ G+L I+ L+ F K G +A
Sbjct: 741 TYGSIIGLLCRICKLAEAEEAFS-----EMIGQ---GILPDTIVYTTLVDGFCKRGDIRA 792
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A + F + + TY I + A + +M+ G PD ++++
Sbjct: 793 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMN 852
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
+CK G K+A V+ + P LI LC+E + LD ++ E K
Sbjct: 853 GYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD-----LDSANELLHEMWK 907
Query: 336 YAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
++P ++S++ LC+ ++ A L+ + + G + +++ AY K+G+M
Sbjct: 908 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 967
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
A E+L M +GL+P + T+ LM+G+ G +E+ ++LN + T++ L++
Sbjct: 968 AQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVK 1027
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH 511
YC A + +M GV+P+ Y L++ C A + + A L ++M+ KG
Sbjct: 1028 QYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHC-NARNMKEAWFLFQEMKGKGFS 1086
Query: 512 LNGITRALI 520
++ T +++
Sbjct: 1087 VSVSTYSVL 1095
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 126/275 (45%), Gaps = 1/275 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
EL+ + K G K AF V N GC N TY I+ L + D A + +M
Sbjct: 847 FTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 906
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G P+ I++ CK G +EA + + L+ + C+ E
Sbjct: 907 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 966
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
K A ++L + G+ + I F+ ++ C + + LL+ M+++G P FN +
Sbjct: 967 K-AQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCL 1025
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+ Y ++ A + K M SRG++PD TY L+ G+ N M+EA + E K
Sbjct: 1026 VKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGF 1085
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV 474
+S TY LI+G+ K ++F A ++ ++M+ G+
Sbjct: 1086 SVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGL 1120
>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
Length = 1139
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 168/331 (50%), Gaps = 5/331 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ +C ++ +E + +++ IG V L+ F ++ + + A + +
Sbjct: 237 NVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV----TYRTLVYGFCRMEELEMALRITH 292
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G V ++ F I+ L ++++ + A+S+ K+ + G +P+ +I CK
Sbjct: 293 DMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNE 352
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ +A ++ + + P + A LI +LC+ ++ AL + D + K + P+
Sbjct: 353 RFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRG-MIEDALCLFDKMRDKGIKVTVYPY 411
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+S+I C+ + A+ LLS M+ EG P A ++ +I+ + GD++ ME+ + M
Sbjct: 412 NSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAE 471
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
RG+ + YT+T L++G+ +M+EA + ++ ++ + VT++ +I GYC +
Sbjct: 472 RGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRK 531
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
A +L ++M ++G++P+ Y LI LCL +
Sbjct: 532 AFQLYDQMVEMGLKPDNYTYRSLISGLCLTS 562
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 148/332 (44%), Gaps = 2/332 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI K + A +F + G N+ TY I AL +R + + A + +KM +
Sbjct: 342 NALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRD 401
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G +I+ +CK G A + + ++ + P + + LI+ LC+ + +
Sbjct: 402 KGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGD-LS 460
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
+++ + + + F+++I C+ K + A L KMI P FN +I
Sbjct: 461 SCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMI 520
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
Y G++ A ++ M GLKPD YTY L+SG + +A E + + + +++
Sbjct: 521 EGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAV 580
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
L+ + L+ G+ + F L +EM GV+ ++ + ++ + LK D +
Sbjct: 581 LNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYA-ALKQHDKEKSCV 639
Query: 501 LLEDMRLKGLHLNGITRALIRAVKELEEDAIE 532
L +M+ +G+ + I + EE+ I+
Sbjct: 640 LFREMKEQGVKPDDIFYTCMIDALSKEENMIQ 671
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 105/228 (46%), Gaps = 39/228 (17%)
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
S ++ SL +++ A+ L KM+ G V+ + I AY ++ ++ A ++ M S
Sbjct: 167 SQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMES 226
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+K Y LM G +++EA E+ N VTY TL+ G+C++EE +
Sbjct: 227 EGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEM 286
Query: 462 ALKLLNEM-----------------------------------KDVGVQPNVDEYNKLIQ 486
AL++ ++M D+G+ PNV YN LI
Sbjct: 287 ALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALID 346
Query: 487 SLCLKALDWRTAEKLLEDMRLKGLHLNGITRA-LIRAV--KELEEDAI 531
LC K + A++L ++M +GL N +T A LI A+ + + EDA+
Sbjct: 347 KLC-KNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDAL 393
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 135/342 (39%), Gaps = 6/342 (1%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
L+ A+C ++ L+D +++ G K +TV N LI + K G A + +
Sbjct: 379 LIHALCKRGMIEDALCLFDKMRDKGIK----VTVYPYNSLINGYCKQGSLDRARGLLSGM 434
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
G +Y I L R + +M E G ++ +I+ FCK K
Sbjct: 435 VKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKM 494
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
EA ++ + + P + +I C ++ A + D K + S
Sbjct: 495 DEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGN-IRKAFQLYDQMVEMGLKPDNYTYRS 553
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
+I LC V A ++ + + N +++ + + G T + M RG
Sbjct: 554 LISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRG 613
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
+K D+ ++T ++ E++C + E K+ + + Y +I K E AL
Sbjct: 614 VKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQAL 673
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
++M G PN + LI +LC K+ +AE L ++M
Sbjct: 674 NCWDQMVVDGYSPNTVTHTVLINNLC-KSGYLGSAELLCKEM 714
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 129/318 (40%), Gaps = 47/318 (14%)
Query: 176 EVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKG--KAAFEVFNKFGDYGCVANQE 233
E Y LWD + G K +++++ I +++ L + + + +F + + G +
Sbjct: 601 ETYHLWDEMAVRGVK------LDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDI 654
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
Y I+ALS+ + A + ++M+ G P++ +I+ CK G A ++
Sbjct: 655 FYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEM 714
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
+ P + + E + K A D L + +I F+ +I+ LC+
Sbjct: 715 LAGNVLPNKFTYNCFLDYFATEGDMEK-AKD-LHSAMLQGHLASIVSFNILIKGLCKAGK 772
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
+ A L+SK+ G P ++++I K GD+ A E+ M +GLKPDV
Sbjct: 773 IQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDV----- 827
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE-EFDCALKLLNEMKDV 472
V Y+ IR +C + E D AL + M
Sbjct: 828 ------------------------------VAYNIFIR-WCNVHGESDKALGIYTNMIRS 856
Query: 473 GVQPNVDEYNKLIQSLCL 490
GVQPN D Y L+ + L
Sbjct: 857 GVQPNWDTYRALLSGISL 874
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 94/225 (41%), Gaps = 36/225 (16%)
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
LA D+ D +++ IR+ C +++ GA+ L+ +M SEG +N ++
Sbjct: 181 LARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLM 240
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC------------ 428
K + A+E+ +M + G+ D TY L+ G+ ++E A
Sbjct: 241 YGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFV 300
Query: 429 ----------------EILNEAKKNHSRLSPV-------TYHTLIRGYCKLEEFDCALKL 465
E++ EA +L + Y+ LI CK E FD A +L
Sbjct: 301 PSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRL 360
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
EM G++PN Y LI +LC + + A L + MR KG+
Sbjct: 361 FKEMAGRGLEPNEVTYAILIHALCKRGM-IEDALCLFDKMRDKGI 404
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 143/306 (46%), Gaps = 2/306 (0%)
Query: 204 IALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGS 263
I F + G+ AA + GC +N Y + D A + ++M+E
Sbjct: 232 IKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCL 291
Query: 264 LPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLAL 323
PD K++ CK G E+ ++ ++ + P I LC+E ++ A+
Sbjct: 292 CPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEG-SLDRAV 350
Query: 324 DMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAY 383
+L S E + + +++VI LCR V A+ L KM++ G P + +NS+I Y
Sbjct: 351 RLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGY 410
Query: 384 SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
K G + A +LK +G KPD +TY L++G+ G ++A + + R S
Sbjct: 411 CKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSI 470
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
+ Y+TLI+G C+ AL+L+NEM + G +P++ YN +I LC K A L+
Sbjct: 471 IVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLC-KMGCLSDANHLIG 529
Query: 504 DMRLKG 509
D KG
Sbjct: 530 DAITKG 535
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 142/309 (45%), Gaps = 2/309 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V N +I + + A E +K + G N TY I+ ++ + A + +
Sbjct: 365 VVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILK 424
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+ G PD +++ FC+ G +A V+ K + P V LI LCQ+
Sbjct: 425 DAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQG 484
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ AL ++++ + + K I ++ +I LC+M + A L+ I++G P +
Sbjct: 485 LILP-ALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTY 543
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N+++ Y + + A+E++ M S+G+ PDV TY L++G + EE EI +
Sbjct: 544 NTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTE 603
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ +TY+T+I C ++ + A+ LL EMK G+ P+V + LI C K D
Sbjct: 604 KGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFC-KVGDLD 662
Query: 497 TAEKLLEDM 505
A L M
Sbjct: 663 GAYGLFRGM 671
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 152/349 (43%), Gaps = 37/349 (10%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWS--- 253
V N+L+ K G + +F+K G N T+ I+ L + D A
Sbjct: 295 VTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLG 354
Query: 254 -----------------VC---------------EKMIETGSLPDSEKVGKIISWFCKGG 281
+C KM+ G P+ II +CK G
Sbjct: 355 CVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKG 414
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+A+ + A K P + L++ CQ+ + + A+ + D G+ + +I +
Sbjct: 415 MVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQ-AMAVFKDGLGKGLRPSIIVY 473
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+++I+ LC+ + A L+++M +G P +N +I+ K G ++ A ++ +
Sbjct: 474 NTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAIT 533
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
+G PD++TY L+ GY +++ A E++N +TY+TL+ G CK + +
Sbjct: 534 KGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEE 593
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+++ M + G PN+ YN +I+SLC + A LL +M+ KGL
Sbjct: 594 VMEIFKAMTEKGCAPNIITYNTIIESLC-NSKKVNEAVDLLGEMKSKGL 641
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 133/297 (44%), Gaps = 2/297 (0%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
++ + N LI + G A ++ N+ + GC + TY I L + A +
Sbjct: 469 SIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLI 528
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
I G +PD ++ +C+ K A + + M P L++ LC+
Sbjct: 529 GDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKT 588
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
++ ++ +++ + + I ++++I SLC K V+ A LL +M S+G P
Sbjct: 589 AKSEEV-MEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVS 647
Query: 376 FNSVISAYSKAGDMTPAMEMLKLM-RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
F ++I+ + K GD+ A + + M + + TY ++S ++ M+ A + +E
Sbjct: 648 FGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEM 707
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
KKN TY LI G+CK + K L E + G P++ + +++ LC++
Sbjct: 708 KKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVE 764
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 123/283 (43%), Gaps = 4/283 (1%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
GC+ + TY ++ R+ D A + +M G PD +++ CK K++E
Sbjct: 535 GCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEV 594
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
++ EK P +I SLC + V A+D+L + + + F ++I
Sbjct: 595 MEIFKAMTEKGCAPNIITYNTIIESLCNS-KKVNEAVDLLGEMKSKGLTPDVVSFGTLIT 653
Query: 347 SLCRMKDVHGAKTLLSKMISE-GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
C++ D+ GA L M + A +N +ISA+S+ +M A+ + M+ G
Sbjct: 654 GFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCD 713
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
PD YTY L+ G+ G + + + L E + S T+ ++ C + A+ +
Sbjct: 714 PDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGI 773
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLK 508
++ M + P D N + ++ + + E L + +R K
Sbjct: 774 IHLMVQKDIVP--DTVNTIFEADKKGHITYHAYEFLYDGVRDK 814
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 103/246 (41%), Gaps = 2/246 (0%)
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALD 324
P I++ + G +AH VY ++KK+ I S C+ AL
Sbjct: 188 PSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYA-ALR 246
Query: 325 MLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
+L + + +V+ D A+ L +M+ P FN ++ A
Sbjct: 247 LLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALC 306
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV 444
K G + + + + RG+ P+++T+ + G G ++ A +L + R V
Sbjct: 307 KKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVV 366
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLED 504
TY+T+I G C+ A + L++M + G +PN YN +I C K + A ++L+D
Sbjct: 367 TYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGM-VVDANRILKD 425
Query: 505 MRLKGL 510
KG
Sbjct: 426 AVFKGF 431
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 72/146 (49%), Gaps = 1/146 (0%)
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P +N++++ + G A ++ M+ + ++ DVYTYT + + G+ A +
Sbjct: 188 PSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRL 247
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
L + V Y T++ G+ + + D A +L +EM + + P+V +NKL+ +LC
Sbjct: 248 LRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCK 307
Query: 491 KALDWRTAEKLLEDMRLKGLHLNGIT 516
K +E+L + + +G+ N T
Sbjct: 308 KGFVLE-SERLFDKVLKRGVCPNLFT 332
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 46/105 (43%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
T N +I+ FS+ K A +F++ GC + TY I+ + + +
Sbjct: 680 TTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFL 739
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP 300
+ IE G +P G++++ C K +EA + L +K + P
Sbjct: 740 LENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVP 784
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 176/408 (43%), Gaps = 44/408 (10%)
Query: 143 LVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNE 202
+++G L+ +++ + +V L+K+ K +A E+ + T + E
Sbjct: 67 VLVGSKLLSHARYLLNDLVQNLVKS------HKPYHACQLAFSELSRLKSSKFTPNVYGE 120
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + K+ + A +++K G + + + R F+ W + E+MI G
Sbjct: 121 LIIVLCKMELVEEALSMYHKVGAALTIQACNVLLYVLVKTGR---FELLWRIYEEMISNG 177
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE----- 317
P G +I C+ G A ++ R K + P V LI LC +++
Sbjct: 178 LSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAE 237
Query: 318 -----------------------------TVKLALDMLDDFSGEARKYAIKPFSSVIRSL 348
K AL + D GE + F +I L
Sbjct: 238 SMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGL 297
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
C+ ++ A+ L MI P AV+NS+I AY K GD++ AM + + + PDV
Sbjct: 298 CKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDV 357
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNE 468
+TY+ L+ G + + EEA I + K + VTY++LI G CK + D AL++ ++
Sbjct: 358 FTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQ 417
Query: 469 MKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
M + GV+PNV ++ LI C K + + A + +M +K L + +T
Sbjct: 418 MTENGVEPNVITFSTLIDGYC-KIRNLQAAMGIYSEMVIKSLSPDVVT 464
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 136/306 (44%), Gaps = 12/306 (3%)
Query: 190 KEKGVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
+ KG++ TV + LI K + A + + G N TY ++ +
Sbjct: 209 RVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANA 268
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
A + + M+ G +PD G +I CK G+ K A ++ + + P +V L
Sbjct: 269 KQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSL 328
Query: 309 ISSLCQ-EDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSK 363
I + C+ D + +AL + E ++ + P +S +IR LC + A + K
Sbjct: 329 IDAYCKVGDVSEAMALFL------ELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEK 382
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
M EG + +NS+I K G M A+E+ M G++P+V T++ L+ GY
Sbjct: 383 MTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRN 442
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
++ A I +E VTY +I G+CK ALKL ++M D G+ PN +
Sbjct: 443 LQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISC 502
Query: 484 LIQSLC 489
L+ LC
Sbjct: 503 LLDGLC 508
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 154/368 (41%), Gaps = 19/368 (5%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA 216
T V L++ +CS +E ++ ++E+G V N L+ + KL K A
Sbjct: 216 TVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPN----VYTYNTLMDGYCKLANAKQA 271
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
++ G V + T+ I+ L + A ++ MI+ P+ +I
Sbjct: 272 LRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDA 331
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
+CK G EA ++ ++ P + LI LC T + A ++ + + E
Sbjct: 332 YCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEE-AGNIFEKMTKEGILA 390
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
++S+I C+ + A + S+M G P F+++I Y K ++ AM +
Sbjct: 391 NSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIY 450
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
M + L PDV TYT ++ G+ G M+EA ++ ++ N + T L+ G CK
Sbjct: 451 SEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKD 510
Query: 457 EEFDCALKLLNEMKDV----------GVQPNVDE---YNKLIQSLCLKALDWRTAEKLLE 503
+ AL+L E + G +P++ Y LI LC + A KL
Sbjct: 511 GKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDG-QFSKAVKLFS 569
Query: 504 DMRLKGLH 511
DMR GL
Sbjct: 570 DMRRYGLQ 577
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 138/277 (49%), Gaps = 2/277 (0%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
+Y + +E L++ D + M+ G +P++ G ++ C+ + +EA V+
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
+ P + LI+ LC+ + V A ++L++ + + + S++ LC+M
Sbjct: 79 AAQGCSPNVFSYSILIAGLCR-GQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
+ A L S+M+ G PP V+N +I +SK GDM A + + M +G P V+TY
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
L+SG++ G+ + + + + T++ L+ G+CK+ + A +L EM+ +G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257
Query: 474 VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
P+V YN LI+ +C K A++LL +M G+
Sbjct: 258 CPPDVVSYNTLIRGMCSKG-KPHEAQRLLREMIRSGV 293
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 160/369 (43%), Gaps = 20/369 (5%)
Query: 152 FFKWVTSGV--------VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNEL 203
FF+W S V + LL+ + S VY ++ + G V L
Sbjct: 3 FFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAG----CVPNTYTYGYL 58
Query: 204 IALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGS 263
+ + + + A VF GC N +Y I L R + D A + +MI+ G
Sbjct: 59 LRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGH 118
Query: 264 LPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED---ETVK 320
P+ G ++S CK GK KEA +++ + P V LI ++ E +
Sbjct: 119 QPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYR 178
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
L +ML+ + + ++S++ R + ++L M+ +G P FN+++
Sbjct: 179 LFEEMLE----KGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLL 234
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ K GDM A + MRS G PDV +Y L+ G + G+ EA +L E ++
Sbjct: 235 DGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVG 294
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
V+Y+ LI GY K D A+KL E+ G++P+ Y+ +I LC +A A
Sbjct: 295 PDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLC-RAGKVGAAFV 353
Query: 501 LLEDMRLKG 509
+ +DM G
Sbjct: 354 VFKDMIANG 362
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 132/327 (40%), Gaps = 40/327 (12%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+LL +C KE L+ + G GV + N LI FSK G A+ +F +
Sbjct: 127 SLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGV----VYNVLIDGFSKKGDMGEAYRLFEE 182
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ GC+ TY + SR+ F S+ + M+ G +P+ ++ FCK G
Sbjct: 183 MLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGD 242
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
EAH ++ R PP V ++
Sbjct: 243 MVEAHRLFLEMRSLGC-PPDVV-----------------------------------SYN 266
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
++IR +C H A+ LL +MI G P +N +I YSK+G + A+++ +
Sbjct: 267 TLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKS 326
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
GL+PD ++Y+ ++ G++ A + + N S L+ G C+ E +
Sbjct: 327 GLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTES 386
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+L M P + EYN L+ LC
Sbjct: 387 CELFQAMVKFECVPLIPEYNLLMYKLC 413
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 87/244 (35%), Gaps = 36/244 (14%)
Query: 190 KEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
++ V + N L+ F K+G A +F + GC + +Y I + +
Sbjct: 220 RQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPH 279
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A + +MI +G PD +I + K G A ++ + + P
Sbjct: 280 EAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEP--------- 330
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
D FS +S++I LCR V A + MI+ G
Sbjct: 331 -----------------DAFS----------YSTIIDCLCRAGKVGAAFVVFKDMIANGS 363
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
P AV ++ + +T + E+ + M P + Y LM + ++ CE
Sbjct: 364 APDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCE 423
Query: 430 ILNE 433
I +E
Sbjct: 424 IFHE 427
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 143/295 (48%), Gaps = 5/295 (1%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V LN LI F L + AF V K GC + T+ I L A + +
Sbjct: 147 VYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFD 206
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQ 314
K I G PD G +++ CK G A + +K P +V+A+ +I SLC+
Sbjct: 207 KTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRP--NVIAYNTIIDSLCK 264
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
D V A ++ + + I ++S+I +LC + + TLL++M++ P
Sbjct: 265 -DRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVV 323
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
VF++V+ A K G + A +++ +M RG++PDV TYT LM G+ +M+EA ++ +
Sbjct: 324 VFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTM 383
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ +Y+ LI GYC+++ D A+ LL +M G+ + YN LI LC
Sbjct: 384 VHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLC 438
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 8/216 (3%)
Query: 294 REKKMYPPQSVVAF--LISSLCQEDE--TVKLALDMLDDFSGEARKYAIKPFSSVIRSLC 349
R M+PP S V F L++S+ + TV +D F Y + + +I S C
Sbjct: 102 RMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL---NILINSFC 158
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
++ + A ++L+K++ G P N FN++I G + A+ + G +PDV
Sbjct: 159 HLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVV 218
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
TY LM+G G A +L + + R + + Y+T+I CK + A L +EM
Sbjct: 219 TYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEM 278
Query: 470 KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
G+ P++ YN LI +LC +W+ LL +M
Sbjct: 279 ITKGISPDIFTYNSLIHALC-NLCEWKHVTTLLNEM 313
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 133/316 (42%), Gaps = 43/316 (13%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
+ ++++ K + S+ +M G PD + +I+ FC + A V +
Sbjct: 119 LTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGC 178
Query: 299 YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
P + LI LC E + + AL + D GE + + + +++ LC++ + A
Sbjct: 179 QPDNTTFNTLIRGLCVEGK-IGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAI 237
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
LL M+ + P +N++I + K +T A + M ++G+ PD++TY L+
Sbjct: 238 RLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHAL 297
Query: 419 ANGGQMEEACEILNEAKKNHSRLSP----------------------------------- 443
N + + +LNE S++ P
Sbjct: 298 CNLCEWKHVTTLLNEMVN--SKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEP 355
Query: 444 --VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC-LKALDWRTAEK 500
VTY L+ G+C E D A+K+ + M G PNV YN LI C ++ +D A
Sbjct: 356 DVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMD--KAMG 413
Query: 501 LLEDMRLKGLHLNGIT 516
LLE M L+GL + +T
Sbjct: 414 LLEQMSLQGLIADTVT 429
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 1/155 (0%)
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
++M+ PPP F ++++ +K + + + M S G+ PDVYT L++ + +
Sbjct: 100 FNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCH 159
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
++ A +L + K + T++TLIRG C + AL L ++ G QP+V
Sbjct: 160 LRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVT 219
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
Y L+ LC K + A +LL M K N I
Sbjct: 220 YGTLMNGLC-KVGNTSAAIRLLRSMVQKNCRPNVI 253
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 110/275 (40%), Gaps = 10/275 (3%)
Query: 205 ALFSKLGKGKAAFEVFNKFGDY---GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET 261
+ L K + E FN F + G + TY I AL + ++ +M+ +
Sbjct: 257 TIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNS 316
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC---QEDET 318
+P+ ++ CK G AH V + ++ + P L+ C + DE
Sbjct: 317 KIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEA 376
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
VK+ D + ++ ++ +I C+++ + A LL +M +G +N+
Sbjct: 377 VKV----FDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNT 432
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I G + A+ + M + G PD+ TY L+ + EA +L + ++
Sbjct: 433 LIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSN 492
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
+ Y+ I G C+ E + A L + + G
Sbjct: 493 LDADILVYNIAIDGMCRAGELEAARDLFSNLSCQG 527
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 160/328 (48%), Gaps = 11/328 (3%)
Query: 194 VLTVEILNELIALFSKLGKG-KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAW 252
V++V+ N ++ S +G K A +VF +F + G N + + L + A
Sbjct: 203 VVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAH 262
Query: 253 SVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSL 312
++ +M + G+ PD G ++S +C+ G+ + + + K + P + + +I L
Sbjct: 263 NLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLL 322
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEG 368
C+ E V+ + RK+ + P +++VI C++ +V A L +M +
Sbjct: 323 CKNGEVVEA-----EQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKK 377
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P + SVI K+G M A EM M +GL+PD TYT L+ GY G+M+EA
Sbjct: 378 IVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAF 437
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ N+ + + VTY L G CK E D A +LL+EM G+QPNV YN ++ L
Sbjct: 438 SVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGL 497
Query: 489 CLKALDWRTAEKLLEDMRLKGLHLNGIT 516
C K + KL+E+M L G + + IT
Sbjct: 498 C-KIGNIEQTVKLMEEMDLAGFYPDTIT 524
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 164/337 (48%), Gaps = 4/337 (1%)
Query: 188 GEKEKGVLTVEIL-NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRK 246
G ++ GV ++ +I+ F KLG AA ++F++ V + TY I + +
Sbjct: 337 GMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSG 396
Query: 247 IFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVA 306
A + +M+ G PD +I +CK G+ KEA V+ +K + P
Sbjct: 397 KMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYT 456
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
L LC+ E + +A ++L + S + + + +++++ LC++ ++ L+ +M
Sbjct: 457 ALADGLCKNGE-IDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDL 515
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
G P + +++ AY K G+M A E+L++M ++ L+P + T+ LM+G+ G +E+
Sbjct: 516 AGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLED 575
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
++ + + T+++L++ YC ++ M D GV P+ + YN LI+
Sbjct: 576 GERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIK 635
Query: 487 SLCLKALDWRTAEKLLEDMRLKGLHLNGITR-ALIRA 522
C KA + + A L ++M KG + T ALIR
Sbjct: 636 GHC-KARNMKEAWFLHKEMVEKGYSVTAATYDALIRG 671
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 157/343 (45%), Gaps = 11/343 (3%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N ++ +LGK + A + + D G + +Y + R D + +++
Sbjct: 246 NIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKG 305
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD II CK G+ EA + R+ ++P V +IS C+ V
Sbjct: 306 KGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLG-NVS 364
Query: 321 LALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
A + D E R+ I P ++SVI +C+ + A+ + ++M+ +G P +
Sbjct: 365 AACKLFD----EMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTY 420
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
++I Y KAG+M A + M +GL P+V TYT L G G+++ A E+L+E +
Sbjct: 421 TALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSR 480
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ + TY+T++ G CK+ + +KL+ EM G P+ Y L+ + C K +
Sbjct: 481 KGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYC-KMGEMA 539
Query: 497 TAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIENGEALVE 539
A +LL M K L +T ++ +E+GE L+E
Sbjct: 540 KAHELLRIMLNKRLQPTLVTFNVLMN-GFCMSGMLEDGERLIE 581
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 121/283 (42%), Gaps = 1/283 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + K G+ K AF V N+ G N TY + L + D A + +M G
Sbjct: 423 LIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKG 482
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P+ I++ CK G ++ + YP L+ + C+ E K A
Sbjct: 483 LQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAK-A 541
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++L + + + F+ ++ C + + L+ M+ +G P FNS++
Sbjct: 542 HELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQ 601
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y +M E+ K M RG+ PD TY L+ G+ M+EA + E + ++
Sbjct: 602 YCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVT 661
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
TY LIRG+ K ++F A KL EM+ G+ D Y+ +
Sbjct: 662 AATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFV 704
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 57/305 (18%), Positives = 118/305 (38%), Gaps = 38/305 (12%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+ C + KE +++ + + + G V + + L K G+ A E+ ++
Sbjct: 422 ALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGL----CKNGEIDVANELLHE 477
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G N TY + L + + + E+M G PD+ ++ +CK G+
Sbjct: 478 MSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGE 537
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLD--------DFSG 331
+AH + + K++ P L++ C ++ +L ML+ F+
Sbjct: 538 MAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNS 597
Query: 332 EARKYAIK-----------------------PFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
++Y IK ++ +I+ C+ +++ A L +M+ +G
Sbjct: 598 LMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKG 657
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
A ++++I + K A ++ + MR GL + Y + G E
Sbjct: 658 YSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITL 717
Query: 429 EILNE 433
E+ +E
Sbjct: 718 ELCDE 722
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 145/336 (43%), Gaps = 35/336 (10%)
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
+A +VFN+ GC N TY I L + A+ + +MI G LP + I
Sbjct: 438 SALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPI 497
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ-------------------- 314
C G ++A ++ + K P LIS LC
Sbjct: 498 IALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVF 557
Query: 315 --------------EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTL 360
E+ +K A +L+ I ++ +I+ C + D A +
Sbjct: 558 PNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLV 617
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
++ M+ G +N++I Y +G+ T A+ +L LMR G KPD ++YT L+ G+
Sbjct: 618 MNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCK 677
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
+ME A + NE + + VTY LI GYCK E+ D A LL MK G +PNV
Sbjct: 678 ISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQT 737
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
YN LI L K ++ AE+L + M +G+ N +T
Sbjct: 738 YNVLIHGL-TKQNNFSGAEELCKVMIEEGIFPNVVT 772
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 131/310 (42%), Gaps = 9/310 (2%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
NE+I + LG K A V N G AN TY I+ A + + M +
Sbjct: 599 NEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRD 658
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD ++I FCK K + A ++ + + P + LI C+ DE +
Sbjct: 659 GGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCK-DEKLD 717
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A +L+ + ++ ++ +I L + + GA+ L MI EG P + ++I
Sbjct: 718 TATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMI 777
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
K G + A+EM M +G P++ TY+ L+ G++EEA + E +++
Sbjct: 778 DGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLI 837
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+TY +I Y + + A L M G QP + Y LI+ L E
Sbjct: 838 PDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL--------KNEY 889
Query: 501 LLEDMRLKGL 510
LL D RL L
Sbjct: 890 LLADQRLAAL 899
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 106/249 (42%), Gaps = 37/249 (14%)
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
C E + + LD S + + +S+++ L R+ +M+SEG P
Sbjct: 325 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 384
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
++N+VI+A K G++ A ++K + + PD +TYT ++ G+ ++ A ++ N
Sbjct: 385 LLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 444
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKL----EEFD----------------C----------- 461
+ K + VTY TLI G C E FD C
Sbjct: 445 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMG 504
Query: 462 ----ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT- 516
A +L +MK+ G +PNV Y LI LC+ L + A L M G+ N +T
Sbjct: 505 CYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGL-LKVAIGLFHRMSRDGVFPNTVTY 563
Query: 517 RALIRAVKE 525
ALI + E
Sbjct: 564 NALINILVE 572
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 117/261 (44%), Gaps = 2/261 (0%)
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+M+ G P+ +I+ CK G +A + E +M P +I C++
Sbjct: 374 HRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRK 433
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ + AL + + + E + +S++I LC V+ A L+ +MI G P
Sbjct: 434 HD-LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 492
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
I A G A + M+++G +P+VYTYT L+SG G ++ A + +
Sbjct: 493 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 552
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
++ + VTY+ LI + A +LN M G+ N+ YN++I+ C+ D
Sbjct: 553 RDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILG-DP 611
Query: 496 RTAEKLLEDMRLKGLHLNGIT 516
+ A ++ +M +G N +T
Sbjct: 612 KKAMLVMNNMLQRGHSANLVT 632
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 102/261 (39%), Gaps = 24/261 (9%)
Query: 191 EKGVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
E+G+ V +I K G A E+FNK + GC+ N TY I AL + +
Sbjct: 763 EEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVE 822
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A ++ ++ G +PD K+I + GK + A + P LI
Sbjct: 823 EAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 882
Query: 310 SSLCQE----DETVKLALDMLDDFS-------------GEARKYAIKPFSSV------IR 346
L E D+ + D++ + S A+ + P SV +
Sbjct: 883 KGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVS 942
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
+L A LL MIS+G P +NS++ + + ++ AM + K M ++G +
Sbjct: 943 NLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEV 1002
Query: 407 DVYTYTGLMSGYANGGQMEEA 427
+ Y L+ + +EA
Sbjct: 1003 HLNGYKELICALCQLHRRKEA 1023
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 69/348 (19%), Positives = 126/348 (36%), Gaps = 61/348 (17%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V+ N LI +K A E+ + G N TY I+ L + A +
Sbjct: 735 VQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFN 794
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
KMIE G LP+ +I + GK +EA ++ + P + +I +
Sbjct: 795 KMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSG 854
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSL--------------------C----RMK 352
+ V+ A + L + + + +I+ L C +
Sbjct: 855 K-VEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTT 913
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT 412
D + +K+ P V N+++S S AG A E+L M S+GL PD Y
Sbjct: 914 DQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYN 973
Query: 413 GLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
L+ C +L ++ D A+ + M
Sbjct: 974 SLL------------CSLL-----------------------RVRNVDLAMGVFKHMSTQ 998
Query: 473 GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
G + +++ Y +LI +LC + + A E+M ++ + + + +A++
Sbjct: 999 GCEVHLNGYKELICALC-QLHRRKEARITFENMLMRTWNPDDVVQAVL 1045
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 145/336 (43%), Gaps = 35/336 (10%)
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
+A +VFN+ GC N TY I L + A+ + +MI G LP + I
Sbjct: 268 SALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPI 327
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ-------------------- 314
C G ++A ++ + K P LIS LC
Sbjct: 328 IALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVF 387
Query: 315 --------------EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTL 360
E+ +K A +L+ I ++ +I+ C + D A +
Sbjct: 388 PNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLV 447
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
++ M+ G +N++I Y +G+ T A+ +L LMR G KPD ++YT L+ G+
Sbjct: 448 MNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCK 507
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
+ME A + NE + + VTY LI GYCK E+ D A LL MK G +PNV
Sbjct: 508 ISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQT 567
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
YN LI L K ++ AE+L + M +G+ N +T
Sbjct: 568 YNVLIHGL-TKQNNFSGAEELCKVMIEEGIFPNVVT 602
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 131/310 (42%), Gaps = 9/310 (2%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
NE+I + LG K A V N G AN TY I+ A + + M +
Sbjct: 429 NEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRD 488
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD ++I FCK K + A ++ + + P + LI C+ DE +
Sbjct: 489 GGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCK-DEKLD 547
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A +L+ + ++ ++ +I L + + GA+ L MI EG P + ++I
Sbjct: 548 TATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMI 607
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
K G + A+EM M +G P++ TY+ L+ G++EEA + E +++
Sbjct: 608 DGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLI 667
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+TY +I Y + + A L M G QP + Y LI+ L E
Sbjct: 668 PDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL--------KNEY 719
Query: 501 LLEDMRLKGL 510
LL D RL L
Sbjct: 720 LLADQRLAAL 729
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 117/261 (44%), Gaps = 2/261 (0%)
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+M+ G P+ +I+ CK G +A + E +M P +I C++
Sbjct: 204 HRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRK 263
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ + AL + + + E + +S++I LC V+ A L+ +MI G P
Sbjct: 264 HD-LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
I A G A + M+++G +P+VYTYT L+SG G ++ A + +
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 382
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
++ + VTY+ LI + A +LN M G PN+ YN++I+ C+ D
Sbjct: 383 RDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILG-DP 441
Query: 496 RTAEKLLEDMRLKGLHLNGIT 516
+ A ++ +M +G N +T
Sbjct: 442 KKAMLVMNNMLQRGHSANLVT 462
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 106/249 (42%), Gaps = 37/249 (14%)
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
C E + + LD S + + +S+++ L R+ +M+SEG P
Sbjct: 155 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 214
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
++N+VI+A K G++ A ++K + + PD +TYT ++ G+ ++ A ++ N
Sbjct: 215 LLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 274
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKL----EEFD----------------C----------- 461
+ K + VTY TLI G C E FD C
Sbjct: 275 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMG 334
Query: 462 ----ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT- 516
A +L +MK+ G +PNV Y LI LC+ L + A L M G+ N +T
Sbjct: 335 CYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGL-LKVAIGLFHRMSRDGVFPNTVTY 393
Query: 517 RALIRAVKE 525
ALI + E
Sbjct: 394 NALINILVE 402
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 104/261 (39%), Gaps = 24/261 (9%)
Query: 191 EKGVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
E+G+ V +I K G A E+FNK + GC+ N TY I AL + +
Sbjct: 593 EEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVE 652
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A ++ ++ G +PD K+I + GK + A + P LI
Sbjct: 653 EAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712
Query: 310 SSLCQE----DETVKLALDML------------DDFSGEARKYA-------IKPFSSVIR 346
L E D+ + D++ D S + K A ++ ++++
Sbjct: 713 KGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVS 772
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
+L A LL MIS+G P +NS++ + + ++ AM + K M ++G +
Sbjct: 773 NLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEV 832
Query: 407 DVYTYTGLMSGYANGGQMEEA 427
+ Y L+ + +EA
Sbjct: 833 HLNGYKELICALCQLHRRKEA 853
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 75/382 (19%), Positives = 137/382 (35%), Gaps = 65/382 (17%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+ C +L + +K G + V+ N LI +K A E+
Sbjct: 535 ALIDGYCKDEKLDTATSLLEHMKRSGCRPN----VQTYNVLIHGLTKQNNFSGAEELCKV 590
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ G N TY I+ L + A + KMIE G LP+ +I + GK
Sbjct: 591 MIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGK 650
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+EA ++ + P + +I + + V+ A + L + + +
Sbjct: 651 VEEAENLFAELERHGLIPDEITYVKMIEAYIMSGK-VEHAFNFLGRMIKAGCQPTLWTYG 709
Query: 343 SVIRSL--------------------C----RMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+I+ L C + D + +K+ P V N+
Sbjct: 710 VLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNA 769
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
++S S AG A E+L M S+GL PD Y L+ C +L
Sbjct: 770 LVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLL------------CSLL------- 810
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
++ D A+ + M G + +++ Y +LI +LC + + A
Sbjct: 811 ----------------RVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALC-QLHRRKEA 853
Query: 499 EKLLEDMRLKGLHLNGITRALI 520
E+M ++ + + + +A++
Sbjct: 854 RITFENMLMRTWNPDDVVQAVL 875
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 145/336 (43%), Gaps = 35/336 (10%)
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
+A +VFN+ GC N TY I L + A+ + +MI G LP + I
Sbjct: 268 SALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPI 327
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ-------------------- 314
C G ++A ++ + K P LIS LC
Sbjct: 328 IALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVF 387
Query: 315 --------------EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTL 360
E+ +K A +L+ I ++ +I+ C + D A +
Sbjct: 388 PNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLV 447
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
++ M+ G +N++I Y +G+ T A+ +L LMR G KPD ++YT L+ G+
Sbjct: 448 MNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCK 507
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
+ME A + NE + + VTY LI GYCK E+ D A LL MK G +PNV
Sbjct: 508 ISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQT 567
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
YN LI L K ++ AE+L + M +G+ N +T
Sbjct: 568 YNVLIHGL-TKQNNFSGAEELCKVMIEEGIFPNVVT 602
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 131/310 (42%), Gaps = 9/310 (2%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
NE+I + LG K A V N G AN TY I+ A + + M +
Sbjct: 429 NEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRD 488
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD ++I FCK K + A ++ + + P + LI C+ DE +
Sbjct: 489 GGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCK-DEKLD 547
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A +L+ + ++ ++ +I L + + GA+ L MI EG P + ++I
Sbjct: 548 TATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMI 607
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
K G + A+EM M +G P++ TY+ L+ G++EEA + E +++
Sbjct: 608 DGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLI 667
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+TY +I Y + + A L M G QP + Y LI+ L E
Sbjct: 668 PDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL--------KNEY 719
Query: 501 LLEDMRLKGL 510
LL D RL L
Sbjct: 720 LLADQRLAAL 729
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 117/261 (44%), Gaps = 2/261 (0%)
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+M+ G P+ +I+ CK G +A + E +M P +I C++
Sbjct: 204 HRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRK 263
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ + AL + + + E + +S++I LC V+ A L+ +MI G P
Sbjct: 264 HD-LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
I A G A + M+++G +P+VYTYT L+SG G ++ A + +
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMS 382
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
++ + VTY+ LI + A +LN M G PN+ YN++I+ C+ D
Sbjct: 383 RDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILG-DP 441
Query: 496 RTAEKLLEDMRLKGLHLNGIT 516
+ A ++ +M +G N +T
Sbjct: 442 KKAMLVMNNMLQRGHSANLVT 462
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 1/204 (0%)
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
C E + + LD S + + +S+++ L R+ +M+SEG P
Sbjct: 155 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 214
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
++N+VI+A K G++ A ++K + + PD +TYT ++ G+ ++ A ++ N
Sbjct: 215 LLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 274
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
+ K + VTY TLI G C + A L+ EM G+ P I +LC
Sbjct: 275 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMG 334
Query: 493 LDWRTAEKLLEDMRLKGLHLNGIT 516
+ A +L DM+ KG N T
Sbjct: 335 C-YEDAWRLFVDMKNKGCEPNVYT 357
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 104/261 (39%), Gaps = 24/261 (9%)
Query: 191 EKGVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
E+G+ V +I K G A E+FNK + GC+ N TY I AL + +
Sbjct: 593 EEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVE 652
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A ++ ++ G +PD K+I + GK + A + P LI
Sbjct: 653 EAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712
Query: 310 SSLCQE----DETVKLALDML------------DDFSGEARKYA-------IKPFSSVIR 346
L E D+ + D++ D S + K A ++ ++++
Sbjct: 713 KGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVS 772
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
+L A LL MIS+G P +NS++ + + ++ AM + K M ++G +
Sbjct: 773 NLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEV 832
Query: 407 DVYTYTGLMSGYANGGQMEEA 427
+ Y L+ + +EA
Sbjct: 833 HLNGYKELICALCQLHRRKEA 853
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 75/382 (19%), Positives = 137/382 (35%), Gaps = 65/382 (17%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+ C +L + +K G + V+ N LI +K A E+
Sbjct: 535 ALIDGYCKDEKLDTATSLLEHMKRSGCRPN----VQTYNVLIHGLTKQNNFSGAEELCKV 590
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ G N TY I+ L + A + KMIE G LP+ +I + GK
Sbjct: 591 MIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGK 650
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+EA ++ + P + +I + + V+ A + L + + +
Sbjct: 651 VEEAENLFAELERHGLIPDEITYVKMIEAYIMSGK-VEHAFNFLGRMIKAGCQPTLWTYG 709
Query: 343 SVIRSL--------------------C----RMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+I+ L C + D + +K+ P V N+
Sbjct: 710 VLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNA 769
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
++S S AG A E+L M S+GL PD Y L+ C +L
Sbjct: 770 LVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLL------------CSLL------- 810
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
++ D A+ + M G + +++ Y +LI +LC + + A
Sbjct: 811 ----------------RVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALC-QLHRRKEA 853
Query: 499 EKLLEDMRLKGLHLNGITRALI 520
E+M ++ + + + +A++
Sbjct: 854 RITFENMLMRTWNPDDVVQAVL 875
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 175/397 (44%), Gaps = 55/397 (13%)
Query: 176 EVYALWDIVK---EIGEKEKGV-LTVE-----------ILNELIALFSKLGKGKAAFEVF 220
+VY+ ++K E GE EK L VE I LI K G+ + A ++F
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ G +G VAN+ TY I L + I + + EKM E G P+ +++ CK
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKD 281
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKL---------------- 321
G+ K+A V+ RE+ + LI LC+E +E K+
Sbjct: 282 GRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITY 341
Query: 322 ---------------ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
AL + D ++ ++ ++ CR D GA ++ +M
Sbjct: 342 NTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEE 401
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
G P + +I ++++ +M A+++ M GL PDV+TY+ L+ G+ GQM E
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A + + + V Y+T+I GYCK AL+L +M++ + PNV Y+ LI+
Sbjct: 462 ASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIR 521
Query: 487 SLCLKALDWRTAEKLLEDMRLKGLH-----LNGITRA 518
LC K + AE L+E M G+ N I+RA
Sbjct: 522 VLC-KERKLKEAEDLVEKMIDSGIDPSDTICNLISRA 557
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 157/344 (45%), Gaps = 4/344 (1%)
Query: 172 VGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVAN 231
VG W E K K VL V +I + G+ + +F++ + ++G N
Sbjct: 140 VGSSSFNQWWCFFNE--SKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPN 197
Query: 232 QETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYT 291
Y I+ ++ + A + +M + G + + +I K G K+ +Y
Sbjct: 198 VVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYE 257
Query: 292 LAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRM 351
+E ++P +++ LC++ T K A + D+ I ++++I LCR
Sbjct: 258 KMQEHGVFPNLYTYNCVMNQLCKDGRT-KDAFKVFDEMRERGVSCNIVTYNTLIGGLCRE 316
Query: 352 KDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTY 411
+ A ++ +M S P +N++I + G + A+ + + ++SRGL P + TY
Sbjct: 317 MKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTY 376
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
L+SG+ G A +++ E ++ + S VTY LI + + + + A++L + M++
Sbjct: 377 NVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEE 436
Query: 472 VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
+G+ P+V Y+ LI C+K A +L + M K L N +
Sbjct: 437 LGLVPDVHTYSVLIHGFCIKG-QMNEASRLFKSMVEKMLEPNEV 479
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 141/318 (44%), Gaps = 29/318 (9%)
Query: 235 YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR 294
Y I A + + D + +M++ G +P S ++++ + +
Sbjct: 97 YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQW---WCFFN 153
Query: 295 EKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSL 348
E K+ V +F +I C+ E K + D+L E R++ P ++++I
Sbjct: 154 ESKIKVVLDVYSFGIVIKGCCEAGEIEK-SFDLLV----ELREFGFSPNVVIYTTLIDGC 208
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
C+ ++ AK L +M G + +I K G EM + M+ G+ P++
Sbjct: 209 CKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNL 268
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNE 468
YTY +M+ G+ ++A ++ +E ++ + VTY+TLI G C+ + + A K++++
Sbjct: 269 YTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQ 328
Query: 469 MKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI-------- 520
MK + PN+ YN LI C A L D++ +GL + +T ++
Sbjct: 329 MKSYVINPNLITYNTLIDGFC-SVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKG 387
Query: 521 ------RAVKELEEDAIE 532
+ VKE+EE I+
Sbjct: 388 DTSGAAKMVKEMEERGIK 405
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 332 EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS------------- 378
E K + + +I + + + + + ++M+ +G PG+ FN+
Sbjct: 88 ETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQ 147
Query: 379 ---------------------VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
VI +AG++ + ++L +R G P+V YT L+ G
Sbjct: 148 WWCFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDG 207
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
G++E+A ++ E K + TY LI G K ++ +M++ GV PN
Sbjct: 208 CCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPN 267
Query: 478 VDEYNKLIQSLCLKALDWRT--AEKLLEDMRLKGLHLNGIT 516
+ YN ++ LC D RT A K+ ++MR +G+ N +T
Sbjct: 268 LYTYNCVMNQLC---KDGRTKDAFKVFDEMRERGVSCNIVT 305
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 142/331 (42%), Gaps = 43/331 (12%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A E+F GC + TY I+A +R + + A + +KMIE G +PD ++
Sbjct: 377 ARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMD 436
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE------------DETVKLAL 323
CK + +EA +++ P + +I LCQ+ DE +L
Sbjct: 437 GLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLK 496
Query: 324 DMLDD------------FSG--------EAR-------KYAIKPF----SSVIRSLCRMK 352
M DD SG +AR K KP +++I LC+
Sbjct: 497 RMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAG 556
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT 412
+ A+ +L M+S G P +N+++ + +AG A E+L M +RGL P+V TYT
Sbjct: 557 RIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYT 616
Query: 413 GLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
L+SG ++ EAC + + K + + TY LI G+C + D LKL EM
Sbjct: 617 ALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCA 676
Query: 473 GVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
G+ P+ Y L LC R E L E
Sbjct: 677 GISPDHVVYGTLAAELCKSGRSARALEILRE 707
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 115/281 (40%), Gaps = 48/281 (17%)
Query: 235 YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR 294
Y I L + D A + EKM E PDS G +I K GK +A ++
Sbjct: 291 YNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLL 350
Query: 295 EKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDV 354
+ P S VA+ +S+I LC
Sbjct: 351 HSGVTP--STVAY----------------------------------TSLIHGLCMANSF 374
Query: 355 HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
A+ L + M G PP +N +I A K G + A +++K M G PDV TY +
Sbjct: 375 DDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTV 434
Query: 415 MSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD--C-------ALKL 465
M G ++EEA + NE ++ + +++T+I G C+ + D C A +L
Sbjct: 435 MDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRL 494
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLC-LKALDWRTAEKLLEDM 505
L M D G P+V Y+ LI LC + +D A LLEDM
Sbjct: 495 LKRMTDDGHVPDVVTYSTLISGLCSIARVD--DARHLLEDM 533
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 121/291 (41%), Gaps = 22/291 (7%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ A +V+ + C+ T +E R D A + M + PD
Sbjct: 194 GRIDEALQVYRENRREPCLV---TLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSY 250
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVA-------FLISSLCQEDETVKLAL 323
++ CK G+ +EA ++ RE S +I LCQ D + A+
Sbjct: 251 CTVLDGLCKAGRVEEAVRLFG-DRELPSSSSSSSSPPSLRGYNIVILGLCQNDR-IDEAV 308
Query: 324 DMLD-----DFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
M + + S ++ Y I +I L + ++ A+ L K++ G P + S
Sbjct: 309 QMFEKMNERNVSPDSWSYGI-----LIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTS 363
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I A A E+ M RG P TY ++ G +EEAC+++ + ++
Sbjct: 364 LIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDG 423
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
VTY+T++ G CK + AL L NEM+ +G PN +N +I LC
Sbjct: 424 HVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLC 474
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/370 (21%), Positives = 150/370 (40%), Gaps = 49/370 (13%)
Query: 182 DIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEA 241
D++K++ E + V V N ++ K + + A +FN+ GC N+ ++ I
Sbjct: 414 DLIKKMIE-DGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILG 472
Query: 242 LSR---------RKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTL 292
L + R D A+ + ++M + G +PD +IS C + +A +
Sbjct: 473 LCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLED 532
Query: 293 AREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMK 352
+++ P LI LC+ +K A ++LD + + +++++ CR
Sbjct: 533 MVKRQCKPTVVTQNTLIHGLCKAGR-IKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAG 591
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT 412
A+ LLS M++ G P + +++S KA + A + M+S G P+++TYT
Sbjct: 592 QTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYT 651
Query: 413 GLMSGYANGGQME-----------------------------------EACEILNEAKKN 437
L+ G+ + GQ++ A EIL E +++
Sbjct: 652 ALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRES 711
Query: 438 --HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
Y + G + + + AL + +M G P + L+ LC K+
Sbjct: 712 LRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLC-KSGQG 770
Query: 496 RTAEKLLEDM 505
A +LE++
Sbjct: 771 GEARAVLEEI 780
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 107/237 (45%), Gaps = 10/237 (4%)
Query: 233 ETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTL 292
+ Y I++LS+R+ + + + M++ G PDS I+ CK GK EA +V
Sbjct: 45 DVYNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDE 104
Query: 293 AREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS-GEARKYAIKPFSSVIRSLCRM 351
R + + P + +FL LC +++ A +L+ + Y I V+ +LC+
Sbjct: 105 MRSRMIPPYFATSSFLAHELCLRG-SMERAFQLLEIMPVANSSAYNI-----VVVALCKA 158
Query: 352 KDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTY 411
V A L M + P +SV+ +G + E L++ R +P + T
Sbjct: 159 ARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRID---EALQVYRENRREPCLVTL 215
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNE 468
L+ G+ + GQ+++A E+L V+Y T++ G CK + A++L +
Sbjct: 216 NVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGD 272
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 11/155 (7%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F+SVI+ C + A + S ++ E P V+N +I + SK + +M+++M
Sbjct: 13 FTSVIQGWCNVGRTFEAVKIFS-LMEECHSPYPDVYNVLIDSLSKRQETEAVKKMVQVMV 71
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHT---LIRGYCKLE 457
RG PD +T+T ++ G G+M+EA +++E + SR+ P + T L C
Sbjct: 72 DRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMR---SRMIPPYFATSSFLAHELCLRG 128
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
+ A +LL M N YN ++ +LC A
Sbjct: 129 SMERAFQLLEIMP----VANSSAYNIVVVALCKAA 159
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 145/336 (43%), Gaps = 35/336 (10%)
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
+A +VFN+ GC N TY I L + A+ + +MI G LP + I
Sbjct: 268 SALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPI 327
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ-------------------- 314
C G ++A ++ + K P LIS LC
Sbjct: 328 IALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVF 387
Query: 315 --------------EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTL 360
E+ +K A +L+ I ++ +I+ C + D A +
Sbjct: 388 PNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLV 447
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
++ M+ G +N++I Y +G+ T A+ +L LMR G KPD ++YT L+ G+
Sbjct: 448 MNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCK 507
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
+ME A + NE + + VTY LI GYCK E+ D A LL MK G +PNV
Sbjct: 508 ISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQT 567
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
YN LI L K ++ AE+L + M +G+ N +T
Sbjct: 568 YNVLIHGL-TKQNNFSGAEELCKVMIEEGIFPNVVT 602
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 131/310 (42%), Gaps = 9/310 (2%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
NE+I + LG K A V N G AN TY I+ A + + M +
Sbjct: 429 NEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRD 488
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD ++I FCK K + A ++ + + P + LI C+ DE +
Sbjct: 489 GGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCK-DEKLD 547
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A +L+ + ++ ++ +I L + + GA+ L MI EG P + ++I
Sbjct: 548 TATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMI 607
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
K G + A+EM M +G P++ TY+ L+ G++EEA + E +++
Sbjct: 608 DGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLI 667
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+TY +I Y + + A L M G QP + Y LI+ L E
Sbjct: 668 PDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL--------KNEY 719
Query: 501 LLEDMRLKGL 510
LL D RL L
Sbjct: 720 LLADQRLAAL 729
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 117/261 (44%), Gaps = 2/261 (0%)
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+M+ G P+ +I+ CK G +A + E +M P +I C++
Sbjct: 204 HRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRK 263
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ + AL + + + E + +S++I LC V+ A L+ +MI G P
Sbjct: 264 HD-LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
I A G A + M+++G +P+VYTYT L+SG G ++ A + +
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 382
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
++ + VTY+ LI + A +LN M G PN+ YN++I+ C+ D
Sbjct: 383 RDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILG-DP 441
Query: 496 RTAEKLLEDMRLKGLHLNGIT 516
+ A ++ +M +G N +T
Sbjct: 442 KKAMLVMNNMLQRGHSANLVT 462
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 106/249 (42%), Gaps = 37/249 (14%)
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
C E + + LD S + + +S+++ L R+ +M+SEG P
Sbjct: 155 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 214
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
++N+VI+A K G++ A ++K + + PD +TYT ++ G+ ++ A ++ N
Sbjct: 215 LLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 274
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKL----EEFD----------------C----------- 461
+ K + VTY TLI G C E FD C
Sbjct: 275 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMG 334
Query: 462 ----ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT- 516
A +L +MK+ G +PNV Y LI LC+ L + A L M G+ N +T
Sbjct: 335 CYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGL-LKVAIGLFHRMSRDGVFPNTVTY 393
Query: 517 RALIRAVKE 525
ALI + E
Sbjct: 394 NALINILVE 402
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 104/261 (39%), Gaps = 24/261 (9%)
Query: 191 EKGVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
E+G+ V +I K G A E+FNK + GC+ N TY I AL + +
Sbjct: 593 EEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVE 652
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A ++ ++ G +PD K+I + GK + A + P LI
Sbjct: 653 EAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712
Query: 310 SSLCQE----DETVKLALDML------------DDFSGEARKYA-------IKPFSSVIR 346
L E D+ + D++ D S + K A ++ ++++
Sbjct: 713 KGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVS 772
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
+L A LL MIS+G P +NS++ + + ++ AM + K M ++G +
Sbjct: 773 NLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEV 832
Query: 407 DVYTYTGLMSGYANGGQMEEA 427
+ Y L+ + +EA
Sbjct: 833 HLNGYKELICALCQLHRRKEA 853
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 69/348 (19%), Positives = 126/348 (36%), Gaps = 61/348 (17%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V+ N LI +K A E+ + G N TY I+ L + A +
Sbjct: 565 VQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFN 624
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
KMIE G LP+ +I + GK +EA ++ + P + +I +
Sbjct: 625 KMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSG 684
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSL--------------------C----RMK 352
+ V+ A + L + + + +I+ L C +
Sbjct: 685 K-VEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTT 743
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT 412
D + +K+ P V N+++S S AG A E+L M S+GL PD Y
Sbjct: 744 DQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYN 803
Query: 413 GLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
L+ C +L ++ D A+ + M
Sbjct: 804 SLL------------CSLL-----------------------RVRNVDLAMGVFKHMSTQ 828
Query: 473 GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
G + +++ Y +LI +LC + + A E+M ++ + + + +A++
Sbjct: 829 GCEVHLNGYKELICALC-QLHRRKEARITFENMLMRTWNPDDVVQAVL 875
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 165/361 (45%), Gaps = 12/361 (3%)
Query: 159 GVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFE 218
G++ L+ +C + + E LW + E G V + N LI + G + A +
Sbjct: 408 GLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTS----NALIHGLCEAGSKEEAAK 463
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+ + + G V + +Y I A + + + + E+M+ G PD ++ C
Sbjct: 464 LLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLC 523
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED---ETVKLALDMLDDFSGEARK 335
GK +EA ++ ++ +P +I C+ + E KL +M+ + + +
Sbjct: 524 NMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMV---TMKIEQ 580
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
A+ + ++IR+ C ++ A L M S G P +A ++S+I S G + A ++
Sbjct: 581 NAV-VYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQL 639
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
L MR GL P+V YT L+ GY GQM + IL E N+ + +TY +I G+CK
Sbjct: 640 LDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCK 699
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
L A KLLNEM G+ P+ YN L C K A K+ + M G+ L+ I
Sbjct: 700 LGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFC-KEGKMEEALKVCDLMSTGGISLDDI 758
Query: 516 T 516
T
Sbjct: 759 T 759
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 141/327 (43%), Gaps = 18/327 (5%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
F LG G FE+F+ + G + +T F + +L + ++ V + M G PD
Sbjct: 138 FKHLGFG-VVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPD 196
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
+++ FC GG+ +A ++ + + P +I LC+ LD
Sbjct: 197 VYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGR-----LDEA 251
Query: 327 DDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
F + K +KP + +I L +++ A +L +M G P N V+N++I
Sbjct: 252 FQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDG 311
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y + G+++ A+++ M S G+ P+ T L+ GY QME A +L E ++
Sbjct: 312 YCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVIN 371
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE--- 499
T+ ++I C FD AL + EM +PN L+ LC E
Sbjct: 372 QGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWY 431
Query: 500 KLLEDMRLKGLHLNGIT-RALIRAVKE 525
+LLE KG N +T ALI + E
Sbjct: 432 RLLE----KGFAANTVTSNALIHGLCE 454
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 147/328 (44%), Gaps = 13/328 (3%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEI-LNELIALFSKLGKGKAAFEVF 220
+AL+ +C + K+E L +KE+ E+G++ I N LI K GK + F++
Sbjct: 446 NALIHGLCEAGSKEEAAKL---LKEM--LERGLVLDSISYNTLILACCKEGKVEEGFKLK 500
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWA---WSVCEKMIETGSLPDSEKVGKIISWF 277
+ G + TY + L + A W C+K G+ PD+ G +I +
Sbjct: 501 EEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKK---NGNFPDAYTYGIMIDGY 557
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
CK + +E ++ K+ V LI + C E+ ++ A + DD
Sbjct: 558 CKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYC-ENGNMREAFRLRDDMRSRGIPQT 616
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+SS+I L + V A LL +M EG P + ++I Y K G M +L+
Sbjct: 617 SATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQ 676
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M + P+ TYT +++G+ G M+ A ++LNE + VTY+ L G+CK
Sbjct: 677 EMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEG 736
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLI 485
+ + ALK+ + M G+ + Y LI
Sbjct: 737 KMEEALKVCDLMSTGGISLDDITYTTLI 764
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 107/204 (52%), Gaps = 4/204 (1%)
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
++K + ++ SL + +V + + M G P +F+++++A+ G + A+E+
Sbjct: 161 SLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELF 220
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
+ M G+ P+V TY ++ G G+++EA + + +K + S VTY LI G KL
Sbjct: 221 RKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKL 280
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
E FD A +L EM D G PN YN LI C + + TA ++ +DM G+ N +T
Sbjct: 281 ERFDEANCILKEMSDRGYAPNNVVYNTLIDGYC-RIGNISTALQIRDDMISNGISPNSVT 339
Query: 517 -RALIRAVKELEEDAIENGEALVE 539
+LI+ + + +E+ E L+E
Sbjct: 340 CNSLIQGY--CKSNQMEHAEHLLE 361
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 139/361 (38%), Gaps = 40/361 (11%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
LL ++ + K Y ++DI+ G V + + ++ F G+ A E+F K
Sbjct: 168 LLSSLVKANEVKMSYQVFDIMCHCGVTPD----VYLFSTMVNAFCTGGRVDDAIELFRKM 223
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
G N TY I L + D A+ EKM + P G +I+ K +
Sbjct: 224 EKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERF 283
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
EA+ + ++ P V LI C+ + AL + DD +S
Sbjct: 284 DEANCILKEMSDRGYAPNNVVYNTLIDGYCRIG-NISTALQIRDDMISNGISPNSVTCNS 342
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI----------------------- 380
+I+ C+ + A+ LL +M++ G F SVI
Sbjct: 343 LIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRN 402
Query: 381 ------------SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
S + G + A+E+ + +G + T L+ G G EEA
Sbjct: 403 FKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAA 462
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
++L E + L ++Y+TLI CK + + KL EM G+QP++ YN L+ L
Sbjct: 463 KLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGL 522
Query: 489 C 489
C
Sbjct: 523 C 523
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 145/309 (46%), Gaps = 9/309 (2%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A E+ + G AN TY ++ L + + D A ++ E M E G P II+
Sbjct: 93 ARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIIT 152
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
FC+ + EAH + +P LI C+ + V L++L + +
Sbjct: 153 GFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRD-VGRGLELLGEVTRRGFT 211
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
I +S+VI LC+ + A + +M P +NS+I Y +AGDM A+ +
Sbjct: 212 PDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCA---PTAITYNSLIGGYCRAGDMDEAIRL 268
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGY 453
L M PDV TYT LMS + G++++A E+ + N +LSP VT+ +L+ G
Sbjct: 269 LGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVAN--KLSPDVVTFTSLVDGL 326
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
C + AL+LL E+ G P + YN ++ C KA R AE+L+ D R +G N
Sbjct: 327 CGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYC-KANQVRKAEELVADFRSRGFVPN 385
Query: 514 GITRALIRA 522
+T ++ A
Sbjct: 386 TVTYNILVA 394
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 131/297 (44%), Gaps = 17/297 (5%)
Query: 193 GVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAW 252
G+ E L+E +AL + + GC TY I R + D A
Sbjct: 118 GLCKCERLDEAVALVETMA-------------ERGCAPTVVTYNSIITGFCRARRVDEAH 164
Query: 253 SVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSL 312
E+M+ G PD +I FCK + + P + +I L
Sbjct: 165 GFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGL 224
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
C+ ++ A+D+ ++ S AI ++S+I CR D+ A LL KM+ + P
Sbjct: 225 CKAGR-LRDAVDIFEEMS--CAPTAIT-YNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPD 280
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+ +++SA+ K G + A E+ + M + L PDV T+T L+ G G+ME+A E+L
Sbjct: 281 VVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLE 340
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
E + + TY+ ++ GYCK + A +L+ + + G PN YN L+ C
Sbjct: 341 EITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCC 397
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 137/289 (47%), Gaps = 5/289 (1%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I + G+ + A V+ + D + TY + LS+ + A V ++M+
Sbjct: 9 NVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKARRLRDAVQVLQEMVS 67
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
+PD+ + ++ C G + +A + + M + L+ LC+ E +
Sbjct: 68 ARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKC-ERLD 126
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A+ +++ + + ++S+I CR + V A + +M++EG P + ++I
Sbjct: 127 EAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALI 186
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ K+ D+ +E+L + RG PD+ TY+ ++ G G++ +A +I E
Sbjct: 187 GGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CA 243
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ +TY++LI GYC+ + D A++LL +M D P+V Y L+ + C
Sbjct: 244 PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFC 292
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 150/354 (42%), Gaps = 21/354 (5%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+ +C E AL + + E G TV N +I F + + A +
Sbjct: 114 ALVDGLCKCERLDEAVALVETMAERGCAP----TVVTYNSIITGFCRARRVDEAHGFMEQ 169
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
GC + TY I + + + ++ G PD +I CK G+
Sbjct: 170 MVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGR 229
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIK 339
++A ++ E P LI C+ DE ++L M+DD +
Sbjct: 230 LRDAVDIF---EEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPD----VV 282
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
+++++ + C+M + A L +M++ P F S++ G M A+E+L+ +
Sbjct: 283 TYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEI 342
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
RG P +YTY ++ GY Q+ +A E++ + + + VTY+ L+ G C+
Sbjct: 343 TRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRT 402
Query: 460 DCALKLLNEMKDVG--VQPNVDEYNKLIQSLCLKALDWRT--AEKLLEDMRLKG 509
D AL+ L+++ G +V Y ++ +LC D RT A + E+M +G
Sbjct: 403 DQALQYLDQLNSEGGPCPTSVAMYAIILDALC---RDGRTDDAVQFYEEMIQRG 453
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 105/233 (45%), Gaps = 3/233 (1%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
+I C+ G+ + A VY + +PP + + + ++ A+ +L +
Sbjct: 11 VIGGLCRAGRLRHALGVYR--QMNDAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMVSA 68
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
+ V++SLC V A+ L+ +M+ G +++++ K + A
Sbjct: 69 RHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEA 128
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
+ +++ M RG P V TY +++G+ +++EA + + +TY LI G
Sbjct: 129 VALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGG 188
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
+CK + L+LL E+ G P++ Y+ +I LC KA R A + E+M
Sbjct: 189 FCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLC-KAGRLRDAVDIFEEM 240
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 125/323 (38%), Gaps = 43/323 (13%)
Query: 187 IGEKEKGVLTVEIL--NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSR 244
+GE + T +I+ + +I K G+ + A ++F + C TY I R
Sbjct: 202 LGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCR 258
Query: 245 RKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSV 304
D A + KM++ PD ++S FCK G+ +A+ ++ K+ P
Sbjct: 259 AGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVT 318
Query: 305 VAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM 364
L+ LC E ++ AL++L++ + I ++ V+ C+ V A+ L++
Sbjct: 319 FTSLVDGLCGEGR-MEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADF 377
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS----------------------- 401
S G P +N +++ +AG A++ L + S
Sbjct: 378 RSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDG 437
Query: 402 --------------RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYH 447
RG P T+ ++ Q ++A E+L E K P T
Sbjct: 438 RTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCD 497
Query: 448 TLIRGYCKLEEFDCALKLLNEMK 470
++ YC+ A +L +E++
Sbjct: 498 AVVSAYCRAGMIQKADELASELR 520
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 151/311 (48%), Gaps = 2/311 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
L+ F +L + +A ++ ++ + G + ++ L ++ D A+ + K+ G
Sbjct: 301 LVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFG 360
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+P+ +I+ CKGG +A ++Y+ + P + LI S C+ + +A
Sbjct: 361 FVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGR-LDVA 419
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+ D + + ++S+I C+ D+ A++L +M ++G P F S+IS
Sbjct: 420 ISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISG 479
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y K + A ++ M G+ P+VYT+T L+SG + +M EA E+ +E + + +
Sbjct: 480 YCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPT 539
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
VTY+ LI GYC+ + D A +LL +M G+ P+ Y LI LC A+ +
Sbjct: 540 EVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTG-RVSKAKDFI 598
Query: 503 EDMRLKGLHLN 513
+D+ + + LN
Sbjct: 599 DDLHKQNVKLN 609
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 158/354 (44%), Gaps = 10/354 (2%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA 216
SG+VD L K + ++ +++V ++G + V + + N LI K G A
Sbjct: 333 VSGLVDGLRK-------QGKIDDAYELVVKVG-RFGFVPNLFVYNALINSLCKGGDLDKA 384
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
+++ N TY I++ R D A S ++MI+ G +I+
Sbjct: 385 ELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLING 444
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
CK G A ++ K + P + LIS C+ D V+ A + +
Sbjct: 445 QCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCK-DLQVQKAFKLYNKMIDNGITP 503
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ F+++I LC + A L +++ P +N +I Y + G + A E+L
Sbjct: 504 NVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELL 563
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
+ M +GL PD YTY L+SG + G++ +A + +++ K + +L+ + Y L+ GYC+
Sbjct: 564 EDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQE 623
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
AL EM G+ ++ + LI LK D +T LL+DM +GL
Sbjct: 624 GRLMEALSASCEMIQRGINMDLVCHAVLIDG-ALKQPDRKTFFDLLKDMHDQGL 676
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 158/384 (41%), Gaps = 71/384 (18%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
T LI+ + K + + AF+++NK D G N T+ I L A +
Sbjct: 469 TATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELF 528
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
++++E P +I +C+ GK +A + +K + P LIS LC
Sbjct: 529 DELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCST 588
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLC---RMKD------------------- 353
K A D +DD + K +S+++ C R+ +
Sbjct: 589 GRVSK-AKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVC 647
Query: 354 ----VHGA------KT---LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+ GA KT LL M +G P N ++ S+I YSK G A E LM
Sbjct: 648 HAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMV 707
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEA--------------------CEILNEAKK---- 436
+ P+V TYT LM+G G+M+ A C + N K+
Sbjct: 708 TEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMK 767
Query: 437 -----NHSRL-----SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
+H+ L + VT++ +IRG+CKL F A K+L+EM + G+ P+ Y+ LI
Sbjct: 768 EAIGLHHAMLKGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIY 827
Query: 487 SLCLKALDWRTAEKLLEDMRLKGL 510
C ++ + + KL + M +GL
Sbjct: 828 EYC-RSGNVGASVKLWDTMLNRGL 850
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 121/279 (43%), Gaps = 16/279 (5%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
+ L + + F W + ++ + G PD ++ C+ K+ + A+EK
Sbjct: 197 LNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCE---LKD----FLRAKEKIR 249
Query: 299 YPPQ-----SVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRM 351
+ S+V + LI LC+ D V A+++ G+ + + +++ CR+
Sbjct: 250 WMEANGFDLSIVTYNVLIHGLCKGDR-VSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRL 308
Query: 352 KDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTY 411
+ L+ +M+ G P A + ++ K G + A E++ + G P+++ Y
Sbjct: 309 QQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVY 368
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
L++ GG +++A + + + R + +TY LI +C+ D A+ + M
Sbjct: 369 NALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQ 428
Query: 472 VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
G+ V YN LI C K D AE L +M KG+
Sbjct: 429 DGIGETVYAYNSLINGQC-KFGDLSAAESLFIEMTNKGV 466
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 157/383 (40%), Gaps = 42/383 (10%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+ +CS+ E L+D + E K V N LI + + GK AFE+
Sbjct: 510 ALISGLCSTNKMAEASELFDELVERKIKPTEV----TYNVLIEGYCRDGKIDKAFELLED 565
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G V + TY I L A + + + + ++ +C+ G+
Sbjct: 566 MHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGR 625
Query: 283 AKEA------------------HVV--------------YTLARE---KKMYPPQSVVAF 307
EA H V + L ++ + + P +
Sbjct: 626 LMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTS 685
Query: 308 LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
+I + +E + K A + D E + +++++ LC+ ++ A L +M +
Sbjct: 686 MIDTYSKEG-SFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAA 744
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
PP + + + +K G+M A+ + M +GL + T+ ++ G+ G+ EA
Sbjct: 745 NVPPNSITYGCFLDNLTKEGNMKEAIGLHHAML-KGLLANTVTHNIIIRGFCKLGRFHEA 803
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
++L+E +N VTY TLI YC+ ++KL + M + G++P++ YN LI
Sbjct: 804 TKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYG 863
Query: 488 LCLKALDWRTAEKLLEDMRLKGL 510
C+ + A +L +DM +G+
Sbjct: 864 CCVNG-ELDKAFELRDDMLRRGI 885
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 94/218 (43%), Gaps = 36/218 (16%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
++ S+++ L +++ L + ++ G P ++V+ + + D A E ++
Sbjct: 190 VRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIR 249
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M + G + TY L+ G G ++ EA E+ VTY TL+ G+C+L+
Sbjct: 250 WMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQ 309
Query: 458 EFDCALKLLNEMKDVGVQ-----------------------------------PNVDEYN 482
+F+ ++L++EM ++G PN+ YN
Sbjct: 310 QFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYN 369
Query: 483 KLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
LI SLC K D AE L +M L L NGIT +++
Sbjct: 370 ALINSLC-KGGDLDKAELLYSNMSLMNLRPNGITYSIL 406
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 111/277 (40%), Gaps = 49/277 (17%)
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
K F++ D G + Y I+ S+ F A+ + M+ P+ +
Sbjct: 662 KTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTAL 721
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVV-AFLISSLCQE---DETVKLALDMLDDF 329
++ CK G+ A +++ + + PP S+ + +L +E E + L ML
Sbjct: 722 MNGLCKAGEMDRAGLLFKRMQAANV-PPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKGL 780
Query: 330 SGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
+ I +IR C++ H A +LS+M G P ++++I Y ++G++
Sbjct: 781 LANTVTHNI-----IIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNV 835
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
++++ M +RGL+PD+ V Y+ L
Sbjct: 836 GASVKLWDTMLNRGLEPDL-----------------------------------VAYNLL 860
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
I G C E D A +L ++M G+ P+ NK +Q
Sbjct: 861 IYGCCVNGELDKAFELRDDMLRRGIIPD----NKYLQ 893
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 105/249 (42%), Gaps = 25/249 (10%)
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEA-HVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ S PD E + +S C + K++ V + A P V L+++L +
Sbjct: 28 SASKPDEENDCRFVSLLCDIVRGKQSWKVAFNDASISSTLRPHHVEQVLMNTL----DDA 83
Query: 320 KLALDMLDDFSGEARK--YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV-- 375
KLAL + F G + ++ ++ ++ +L + A +LL ++ P
Sbjct: 84 KLALRFFN-FLGLHKNMNHSTTSYAIMVHALVHSRLFWPANSLLHTLLLRESHPKCVFSH 142
Query: 376 ---------------FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
FN ++ Y + + A+ ++KLM + L P+V T + L++G
Sbjct: 143 FLDSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLK 202
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
+ E+ +E+ R P T ++R C+L++F A + + M+ G ++
Sbjct: 203 VRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVT 262
Query: 481 YNKLIQSLC 489
YN LI LC
Sbjct: 263 YNVLIHGLC 271
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 141/272 (51%), Gaps = 2/272 (0%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
I + + +A+SV K+++ G +PD+ +I C G+ ++A + +
Sbjct: 127 INCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGF 186
Query: 299 YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
+ Q LI LC+ ET + ALD+L G + + ++++I S+C++K V+ A
Sbjct: 187 HFDQISYGTLIHGLCKVGET-RAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAF 245
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
L S+MIS+G P ++++IS + G + A+++ M +KPDVYT+ L++ +
Sbjct: 246 DLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAF 305
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G+M+E + + K + + VTY++L+ GYC ++E + A + N M GV P++
Sbjct: 306 CKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDI 365
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
Y+ +I C K + A L ++M K +
Sbjct: 366 QSYSIMINGFC-KIKKFDEAMNLFKEMHRKNI 396
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 145/314 (46%), Gaps = 10/314 (3%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI F +LG AF VF K G V + T+ I+ L + A+ +K++
Sbjct: 124 NILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVA 183
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G D G +I CK G+ + A + + P + +I S+C+ VK
Sbjct: 184 LGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCK----VK 239
Query: 321 LALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
L + D FS K I P +S++I C + ++ A L +KMI E P F
Sbjct: 240 LVNEAFDLFSEMISK-GISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTF 298
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N +++A+ K G M + +M +G+KP+ TY LM GY ++ +A I N +
Sbjct: 299 NILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQ 358
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+Y +I G+CK+++FD A+ L EM + P+V Y+ LI L K+
Sbjct: 359 GGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLS-KSGRIS 417
Query: 497 TAEKLLEDMRLKGL 510
A +L++ M +G+
Sbjct: 418 YALQLVDQMHDRGV 431
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 148/311 (47%), Gaps = 8/311 (2%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI+ F LGK A ++FNK + T+ + A + +V + M++ G
Sbjct: 266 LISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQG 325
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P+ ++ +C + +A ++ + + P + +I+ C+ +K
Sbjct: 326 IKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCK----IKKF 381
Query: 323 LDMLDDFSGEARKYAIK---PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
+ ++ F RK I +SS+I L + + A L+ +M G PP +NS+
Sbjct: 382 DEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSI 441
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+ A K + A+ +L ++ +G++P++YTY+ L+ G G++E+A ++
Sbjct: 442 LDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGH 501
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
L+ TY +I+G+C F+ AL LL++M+D G P+ Y +I SL K + AE
Sbjct: 502 NLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSL-FKKDENDMAE 560
Query: 500 KLLEDMRLKGL 510
KLL +M +G+
Sbjct: 561 KLLREMIARGV 571
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 85/216 (39%), Gaps = 37/216 (17%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+SS + DV A +L ++++ P FN ++ + K+ + + + M
Sbjct: 53 YSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKME 112
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR--------- 451
RG+KP++ L++ + G + A + + K +T+ TLI+
Sbjct: 113 FRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQ 172
Query: 452 --------------------------GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
G CK+ E AL LL + VQPNV YN +I
Sbjct: 173 QAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTII 232
Query: 486 QSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALI 520
S+C K A L +M KG+ + +T ALI
Sbjct: 233 DSMC-KVKLVNEAFDLFSEMISKGISPDVVTYSALI 267
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 144/313 (46%), Gaps = 2/313 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+ L+ LI FS L + AF VF+K G + T+ I L + F A +
Sbjct: 130 IYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFD 189
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+G P II+ CK G+ A ++ E P LI SLC+ D
Sbjct: 190 DFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCK-D 248
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ V ALD+ + I ++S+I+ LC + A LL++M S P F
Sbjct: 249 KLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTF 308
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N ++ A K G ++ A + K M G++PDV TY+ LM GY+ ++ EA ++ +
Sbjct: 309 NVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMIT 368
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ +Y+ LI+GYCK + D A +L NEM G+ P+ YN LI LC + R
Sbjct: 369 KGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLC-QLGRLR 427
Query: 497 TAEKLLEDMRLKG 509
A+ L ++M G
Sbjct: 428 EAQDLFKNMHSNG 440
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 140/318 (44%), Gaps = 2/318 (0%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
TV +I K+G+ AA +F K + GC N TY I++L + K+ + A +
Sbjct: 199 TVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIF 258
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
M PD +I C + KEA + + P L+ ++C+E
Sbjct: 259 SYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKE 318
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ V A + + + + +SS++ ++ A+ L MI++G P
Sbjct: 319 GK-VSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFS 377
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N +I Y KA + A ++ M +GL PD Y L+ G G++ EA ++
Sbjct: 378 YNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMH 437
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
N + TY L+ G+CK A +L M+ ++P++ YN LI ++C K +
Sbjct: 438 SNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMC-KFGNL 496
Query: 496 RTAEKLLEDMRLKGLHLN 513
+ A KL ++ ++GL N
Sbjct: 497 KDARKLFSELFVQGLLPN 514
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 137/316 (43%), Gaps = 13/316 (4%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
++L++ +C+ KE AL + + + + T +L + I K+ + + F+
Sbjct: 274 NSLIQGLCNFRRWKEASALLNEMTSLNIMPN-IFTFNVLVDAICKEGKVSEAQGVFKTMT 332
Query: 222 KFGDYGCVANQET----YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
+ G V + Y +E + RK+FD MI G PD+ +I +
Sbjct: 333 EMGVEPDVVTYSSLMYGYSLRMEIVEARKLFD-------AMITKGCKPDAFSYNILIKGY 385
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
CK + EA ++ + + P LI LCQ ++ A D+ +
Sbjct: 386 CKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGR-LREAQDLFKNMHSNGNLPD 444
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+ +S ++ C+ + A L M S P A++N +I A K G++ A ++
Sbjct: 445 LFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFS 504
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
+ +GL P+V YT +++ G ++EA E + + +Y+ +IRG+ + +
Sbjct: 505 ELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYK 564
Query: 458 EFDCALKLLNEMKDVG 473
+ A +L+ EM+D G
Sbjct: 565 DESRAAQLIGEMRDRG 580
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 77/154 (50%), Gaps = 1/154 (0%)
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMIS-EGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
I F+ ++ ++ +M +GA LSK + G P + +I +S + A +
Sbjct: 93 CIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSV 152
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
M GL+PD T+ L++G G+ +A E ++ + + + + TY T+I G CK
Sbjct: 153 FSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCK 212
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ E A L +M++ G QPNV YN LI SLC
Sbjct: 213 IGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLC 246
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 92/212 (43%), Gaps = 1/212 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI + K + A ++FN+ G + Y I L + A + + M
Sbjct: 379 NILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHS 438
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G+LPD ++ FCK G +A ++ + + + P ++ LI ++C+ +K
Sbjct: 439 NGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFG-NLK 497
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A + + + ++ ++++I +LC+ + A M +G PP +N +I
Sbjct: 498 DARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVII 557
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT 412
+ + D + A +++ MR RG + T T
Sbjct: 558 RGFLQYKDESRAAQLIGEMRDRGFVAEAGTTT 589
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 147/306 (48%), Gaps = 6/306 (1%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V N LIA K G+ A +V ++ G AN TY I LS A V +
Sbjct: 89 VVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQ 148
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVV-AFLISSLCQE 315
M T PD++ II FCK G+ A+ +++ P + + LI+ LC+
Sbjct: 149 GMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKS 205
Query: 316 DETVKLALDMLDDFSGEARKYA-IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
K A ++L + G A + F++++ C+ +D+ A+ LLS M+ G P
Sbjct: 206 SNLRK-ADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVV 264
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
++++I + GD+ +L+ M SRG KPDV TYT L++G G+M EAC ++
Sbjct: 265 TYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRM 324
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
++ + VTY + G CK+++ D A LL ++D G +V + L+ S+ + LD
Sbjct: 325 LEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLLLSVKKRLLD 384
Query: 495 WRTAEK 500
+K
Sbjct: 385 RAAFQK 390
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 122/313 (38%), Gaps = 44/313 (14%)
Query: 235 YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH------- 287
Y F + AL + A V + M + PD +I+ CK G+ EA
Sbjct: 57 YNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEME 116
Query: 288 --------VVYT-----------------LAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
V Y + + P +I C+ E + A
Sbjct: 117 RSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGE-IDRA 175
Query: 323 LDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV-FN 377
L++ A P +S +I LC+ ++ A LL +MI + V FN
Sbjct: 176 YGFLEEMKQRA---GCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFN 232
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+++ Y KA D+ A E+L M G PDV TY+ ++ G G +++ +L +
Sbjct: 233 TLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSR 292
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC-LKALDWR 496
+ VTY L+ G CK + A +L+ M + G PN Y+ + LC + LD
Sbjct: 293 GCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDM- 351
Query: 497 TAEKLLEDMRLKG 509
A LL +R KG
Sbjct: 352 -ANDLLTSIRDKG 363
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 35/196 (17%)
Query: 344 VIRSLCRMKDVHGAKTLLSKMISE-GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
++R+ C ++ A LL +M + G P +++N + A K+G + AME++K M+
Sbjct: 24 LVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDG 83
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL------------- 449
KPDV T+ L++G G+++EA ++L+E +++ + VTY+TL
Sbjct: 84 ACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEA 143
Query: 450 -------------------IRGYCKLEEFDCALKLLNEMKD-VGVQPNVDEYNKLIQSLC 489
I G+CK E D A L EMK G P+ Y+ LI LC
Sbjct: 144 VLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLC 203
Query: 490 LKALDWRTAEKLLEDM 505
K+ + R A++LL++M
Sbjct: 204 -KSSNLRKADELLQEM 218
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSR-GLKPDVYTYTGLMSGYANGGQMEEACEIL 431
N + ++ A+ AG++ AM++L+ M + G+ P Y + G++ EA E++
Sbjct: 18 NYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVV 77
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
K + VT++TLI G CK D A ++L+EM+ G N+ YN LI L
Sbjct: 78 KNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGL 134
>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 149/315 (47%), Gaps = 2/315 (0%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+ N +++ K + +F +F G + T I +A+SV +
Sbjct: 63 LFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSVFANI 122
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
++ G P++ + +I C G+ K A + + Q LI+ LC+ ET
Sbjct: 123 LKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAGET 182
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+A +L G + K + ++++I LC+ K + A L S+MI +G P + +
Sbjct: 183 KAVA-RLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTT 241
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I + G++ A +L M+ + + PDVYT+ L+ A G+++EA + E K +
Sbjct: 242 LIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKN 301
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
+ VTY +LI G CK + A+ L +MK+ G+QPNV Y L+ +LC K A
Sbjct: 302 MFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALC-KGGRLENA 360
Query: 499 EKLLEDMRLKGLHLN 513
++ + + +KG HLN
Sbjct: 361 KQFFQHLLVKGYHLN 375
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 156/388 (40%), Gaps = 49/388 (12%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEI--LNELIALFSKLGKGKAAFEVFN 221
L I SS+ K + Y ++ + E +T ++ L+ LI F L AF VF
Sbjct: 63 LFNNILSSLVKNKRYP--TVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSVFA 120
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G N T I+ L A +K++ G D G +I+ CK G
Sbjct: 121 NILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAG 180
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP- 340
+ K + + P + +I LC+ KL D D +S K I P
Sbjct: 181 ETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKN----KLLGDACDLYSEMIVK-GISPN 235
Query: 341 ---FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML- 396
++++I C M ++ A +LL++M + P FN +I A +K G + AM +
Sbjct: 236 VFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFE 295
Query: 397 ----------------------------------KLMRSRGLKPDVYTYTGLMSGYANGG 422
K M+ +G++P+VY+YT L+ GG
Sbjct: 296 EMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGG 355
Query: 423 QMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
++E A + L+ TY+ +I G CK F + L ++M+ G PN +
Sbjct: 356 RLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFK 415
Query: 483 KLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+I +L L+ + AEK L +M +GL
Sbjct: 416 TIICAL-LEKDENDKAEKFLREMIARGL 442
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 98/225 (43%), Gaps = 4/225 (1%)
Query: 289 VYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
V + R M PP F ++SSL + ++ + + F + S +I
Sbjct: 46 VASFNRMLLMRPPPPTFLFNNILSSLVK-NKRYPTVISLFKQFEPNGITPDLCTLSILIN 104
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
C + + A ++ + ++ G P N++I G++ A+ + ++G +
Sbjct: 105 CFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQL 164
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
D +Y L++G G+ + +L + + + + V Y T+I CK + A L
Sbjct: 165 DQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLY 224
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH 511
+EM G+ PNV Y LI C+ + + A LL +M+LK ++
Sbjct: 225 SEMIVKGISPNVFTYTTLIHGFCIMG-NLKEAFSLLNEMKLKNIN 268
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 147/306 (48%), Gaps = 6/306 (1%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V N LIA K G+ A +V ++ G AN TY I LS A V +
Sbjct: 89 VVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQ 148
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVV-AFLISSLCQE 315
M T PD++ II FCK G+ A+ +++ P + + LI+ LC+
Sbjct: 149 GMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKS 205
Query: 316 DETVKLALDMLDDFSGEARKYA-IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
K A ++L + G A + F++++ C+ +D+ A+ LLS M+ G P
Sbjct: 206 SNLRK-ADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVV 264
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
++++I + GD+ +L+ M SRG KPDV TYT L++G G+M EAC ++
Sbjct: 265 TYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRM 324
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
++ + VTY + G CK+++ D A LL ++D G +V + L+ S+ + LD
Sbjct: 325 LEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALLLSVKKRLLD 384
Query: 495 WRTAEK 500
+K
Sbjct: 385 RAAFQK 390
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 122/313 (38%), Gaps = 44/313 (14%)
Query: 235 YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH------- 287
Y F + AL + A V + M + PD +I+ CK G+ EA
Sbjct: 57 YNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEME 116
Query: 288 --------VVYT-----------------LAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
V Y + + P +I C+ E + A
Sbjct: 117 RSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGE-IDRA 175
Query: 323 LDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV-FN 377
L++ A P +S +I LC+ ++ A LL +MI + V FN
Sbjct: 176 YGFLEEMKQRA---GCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFN 232
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+++ Y KA D+ A E+L M G PDV TY+ ++ G G +++ +L +
Sbjct: 233 TLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSR 292
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC-LKALDWR 496
+ VTY L+ G CK + A +L+ M + G PN Y+ + LC + LD
Sbjct: 293 GCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDM- 351
Query: 497 TAEKLLEDMRLKG 509
A LL +R KG
Sbjct: 352 -ANDLLTSIRDKG 363
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 35/196 (17%)
Query: 344 VIRSLCRMKDVHGAKTLLSKMISE-GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
++R+ C ++ A LL +M + G P +++N + A K+G + AME++K M+
Sbjct: 24 LVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDG 83
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL------------- 449
KPDV T+ L++G G+++EA ++L+E +++ + VTY+TL
Sbjct: 84 ACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEA 143
Query: 450 -------------------IRGYCKLEEFDCALKLLNEMKD-VGVQPNVDEYNKLIQSLC 489
I G+CK E D A L EMK G P+ Y+ LI LC
Sbjct: 144 VLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLC 203
Query: 490 LKALDWRTAEKLLEDM 505
K+ + R A++LL++M
Sbjct: 204 -KSSNLRKADELLQEM 218
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSR-GLKPDVYTYTGLMSGYANGGQMEEACEIL 431
N + ++ A+ AG++ AM++L+ M + G+ P Y + G++ EA E++
Sbjct: 18 NYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVV 77
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
K + VT++TLI G CK D A ++L+EM+ G N+ YN LI L
Sbjct: 78 KNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGL 134
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 138/277 (49%), Gaps = 2/277 (0%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
+Y + +E L++ D + M+ G +P++ G ++ C+ + +EA V+
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
+ P + LI+ LC+ + V A ++L++ + + + S++ LC+M
Sbjct: 79 AAQGCSPNVFSYSILIAGLCR-GQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
+ A L S+M+ G PP V+N +I +SK GDM A + + M +G P V+TY
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
L+SG++ G+ + + + + T++ L+ G+CK+ + A +L EM+ +G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257
Query: 474 VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
P+V YN L++ +C K A++LL +M G+
Sbjct: 258 CPPDVVSYNTLMRGMCSKG-KPHEAQRLLREMIRSGV 293
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 160/369 (43%), Gaps = 20/369 (5%)
Query: 152 FFKWVTSGV--------VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNEL 203
FF+W S V + LL+ + S VY ++ + G V L
Sbjct: 3 FFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAG----CVPNTYTYGYL 58
Query: 204 IALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGS 263
+ + + + A VF GC N +Y I L R + D A + +MI+ G
Sbjct: 59 LRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGH 118
Query: 264 LPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED---ETVK 320
P+ G ++S CK GK KEA +++ + P V LI ++ E +
Sbjct: 119 QPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYR 178
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
L +ML+ + + ++S++ R + ++L M+ +G P FN+++
Sbjct: 179 LFEEMLE----KGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLL 234
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ K GDM A + MRS G PDV +Y LM G + G+ EA +L E ++
Sbjct: 235 DGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVG 294
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
V+Y+ LI GY K D A+KL E+ G++P+ Y+ +I LC +A A
Sbjct: 295 PDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLC-RAGKVGAAFV 353
Query: 501 LLEDMRLKG 509
+ +DM G
Sbjct: 354 VFKDMIANG 362
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 132/327 (40%), Gaps = 40/327 (12%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+LL +C KE L+ + G GV + N LI FSK G A+ +F +
Sbjct: 127 SLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGV----VYNVLIDGFSKKGDMGEAYRLFEE 182
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ GC+ TY + SR+ F S+ + M+ G +P+ ++ FCK G
Sbjct: 183 MLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGD 242
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
EAH ++ R PP V ++
Sbjct: 243 MVEAHRLFLEMRSLGC-PPDVV-----------------------------------SYN 266
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+++R +C H A+ LL +MI G P +N +I YSK+G + A+++ +
Sbjct: 267 TLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKS 326
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
GL+PD ++Y+ ++ G++ A + + N S L+ G C+ E +
Sbjct: 327 GLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTES 386
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+L M P + EYN L+ LC
Sbjct: 387 CELFQAMVKFECVPLIPEYNLLMYKLC 413
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 87/244 (35%), Gaps = 36/244 (14%)
Query: 190 KEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
++ V + N L+ F K+G A +F + GC + +Y + + +
Sbjct: 220 RQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPH 279
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A + +MI +G PD +I + K G A ++ + + P
Sbjct: 280 EAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEP--------- 330
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
D FS +S++I LCR V A + MI+ G
Sbjct: 331 -----------------DAFS----------YSTIIDCLCRAGKVGAAFVVFKDMIANGS 363
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
P AV ++ + +T + E+ + M P + Y LM + ++ CE
Sbjct: 364 APDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCE 423
Query: 430 ILNE 433
I +E
Sbjct: 424 IFHE 427
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 155/303 (51%), Gaps = 6/303 (1%)
Query: 226 YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKE 285
+G N TY + AL R + A V M G P++ +++ FC+ G+
Sbjct: 4 HGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDG 63
Query: 286 AHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
A V +L RE+ P ++V F +++ LC+ ++ A + D+ E + +++
Sbjct: 64 AERVVSLMREEGNAKP-NLVTFNSMVNGLCKAGR-MEGARKVFDEMVREGLAPDVVSYNT 121
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
++ C++ +H + + S+M G P F S+I A KAG++ A+ ++ MR RG
Sbjct: 122 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 181
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
L+ + T+T L+ G+ G +++A + E +K + S V Y+ LI GYCKL D A
Sbjct: 182 LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAR 241
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRA 522
+L+ EM+ V+P+V Y+ +I C K + +A +L + M KG+ + IT +LIR
Sbjct: 242 ELIREMEAKRVKPDVVTYSTIISGYC-KVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 300
Query: 523 VKE 525
+ E
Sbjct: 301 LCE 303
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 167/360 (46%), Gaps = 7/360 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L++A+C+ +E + ++ G V N L+A F + G+ A V +
Sbjct: 14 NILVRALCARGRLEEAVGVVGDMRGAGCAPNAV----TYNTLVAAFCRAGELDGAERVVS 69
Query: 222 KFGDYGCV-ANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ G N T+ + L + + A V ++M+ G PD ++S +CK
Sbjct: 70 LMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKV 129
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
G E+ V++ ++ + P LI + C+ ++ A+ ++ +
Sbjct: 130 GCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAG-NLEQAVALVAQMRERGLRMNEVT 188
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F+++I C+ + A + +M G P +N++I+ Y K G M A E+++ M
Sbjct: 189 FTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREME 248
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
++ +KPDV TY+ ++SGY G ++ A ++ + K +TY +LIRG C+ + +
Sbjct: 249 AKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLN 308
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
A +L M +GVQP+ Y LI C K + A L ++M KG+ + +T +++
Sbjct: 309 DACELFENMLQLGVQPDEFTYTTLIDGHC-KEGNVEKALSLHDEMIRKGVLPDVVTYSVL 367
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 162/347 (46%), Gaps = 17/347 (4%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ A C + + +++E G + ++T N ++ K G+ + A +VF+
Sbjct: 49 NTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVT---FNSMVNGLCKAGRMEGARKVFD 105
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ G + +Y + + + +V +M + G +PD +I CK G
Sbjct: 106 EMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAG 165
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED--ETVKLALDMLDDFSGEARKYAIK 339
++A + RE+ + + LI C++ + LA++ E RK I+
Sbjct: 166 NLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVE-------EMRKCGIQ 218
Query: 340 P----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
P ++++I C++ + A+ L+ +M ++ P ++++IS Y K G++ A ++
Sbjct: 219 PSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQL 278
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
+ M +G+ PD TY+ L+ G ++ +ACE+ + + TY TLI G+CK
Sbjct: 279 NQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCK 338
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
+ AL L +EM GV P+V Y+ LI L K+ + A +LL
Sbjct: 339 EGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLS-KSARTKEAHRLL 384
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 143/310 (46%), Gaps = 3/310 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L++ + K+G + VF++ G V + T+ I A + + A ++ +M E
Sbjct: 120 NTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRE 179
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G + +I FCK G +A + R+ + P LI+ C+ +
Sbjct: 180 RGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR-MD 238
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
LA +++ + + K + +S++I C++ ++ A L KM+ +G P ++S+I
Sbjct: 239 LARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLI 298
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ + A E+ + M G++PD +TYT L+ G+ G +E+A + +E +
Sbjct: 299 RGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVL 358
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
VTY LI G K A +LL ++ P+ +Y+ L+ LC ++++
Sbjct: 359 PDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM--LCCSKAEFKSVVA 416
Query: 501 LLEDMRLKGL 510
LL+ +KGL
Sbjct: 417 LLKGFCMKGL 426
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 129/349 (36%), Gaps = 65/349 (18%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V LI K G + A + + + G N+ T+ I+ ++ D A E
Sbjct: 151 VVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVE 210
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE- 315
+M + G P +I+ +CK G+ A + K++ P + +IS C+
Sbjct: 211 EMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVG 270
Query: 316 --DETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
D +L ML K + P +SS+IR LC K ++ A L M+ G
Sbjct: 271 NLDSAFQLNQKML--------KKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGV 322
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
P + ++I + K G++ A+ + M +G+ PDV TY+ L++G + + +EA
Sbjct: 323 QPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHR 382
Query: 430 IL-------------------------------------------NEAKKNHS------- 439
+L EA K +
Sbjct: 383 LLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNW 442
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+L Y LI G+C+ AL +M G PN L++ L
Sbjct: 443 KLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGL 491
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 157/358 (43%), Gaps = 6/358 (1%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L+ C + G Y ++ I+ + G + V +++ L + G+ A ++F
Sbjct: 234 SLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGL----CEAGRINEALKLFAD 289
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ C TY I ALS A ++ +M E G P+ +I CK K
Sbjct: 290 MTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENK 349
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
EA + + EK + P LI C+E + A ++LD + + ++
Sbjct: 350 MDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEG-MIDDAFEILDLMESNSCGPNTRTYN 408
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+I LC+ + VH A LL+KM+ P +NS+I K D+ A +L LM
Sbjct: 409 ELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNEN 468
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
GL PD +TY+ + G++EEA + + K + + V Y LI GYCK+ + D A
Sbjct: 469 GLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVA 528
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
LL M + PN YN LI+ LC K + A L+ M G+ +T ++
Sbjct: 529 YSLLERMLNDACLPNSYTYNVLIEGLC-KEKKMKEASSLVAKMLTMGVKPTVVTYTIL 585
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 5/290 (1%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
NELI K K A + NK + + TY I + + A+ + M E
Sbjct: 408 NELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNE 467
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G +PD I CK G+ +EA ++ + K + + + LI C+ + +
Sbjct: 468 NGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGK-ID 526
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
+A +L+ +A ++ +I LC+ K + A +L++KM++ G P + +I
Sbjct: 527 VAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILI 586
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
K G A+++ M S G +PDV TYT + Y + G +EE +++ AK N
Sbjct: 587 GEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVI--AKMNEEG 644
Query: 441 LSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ P VTY LI GY +L A L M D G +P++ + LI++L
Sbjct: 645 ILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNL 694
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 129/279 (46%), Gaps = 4/279 (1%)
Query: 216 AFEVFNKF---GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGK 272
EVF K G++ Y + +LS+ + D +V +++ P+
Sbjct: 140 VLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNA 199
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
+++ +CK G EA + + + ++P LI C+ ++ V A ++ +
Sbjct: 200 MVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCR-NKGVDNAYEVFLIMPQK 258
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
+ ++++I LC ++ A L + M + P + +I A S +G A
Sbjct: 259 GCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEA 318
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
+ + M+ +G +P+V+TYT L+ G +M+EA ++L+E + S VTY+ LI G
Sbjct: 319 LNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDG 378
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
YCK D A ++L+ M+ PN YN+LI LC K
Sbjct: 379 YCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKK 417
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 166/424 (39%), Gaps = 52/424 (12%)
Query: 103 KLENVLSLLQSSVDGYLESSLDSFELDLHEDFVLKVLETPL----VLGENLVCFFKWVTS 158
K+ ++LL ++ L SL ++ +H + LE+ ++ EN + +W S
Sbjct: 419 KVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYS 478
Query: 159 GVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFE 218
+D L C +E L+D VK G K V I LI + K+GK A+
Sbjct: 479 VFIDTL----CKEGRVEEAGTLFDSVKAKGVKANEV----IYTALIDGYCKVGKIDVAYS 530
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+ + + C+ N TY IE L + K A S+ KM+ G P +I
Sbjct: 531 LLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEML 590
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQ-SVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
K G A V+ P + AFL + Q L+ +DD + +
Sbjct: 591 KDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQG------MLEEVDDVIAKMNEEG 644
Query: 338 IKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP-- 391
I P ++ +I R+ H A L M+ G P + + +I S M
Sbjct: 645 ILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETR 704
Query: 392 ---------------------------AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
A+++ + M G DV Y L++G+ ++
Sbjct: 705 SEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERL 764
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
EEA +++ K+ S Y++L+ CKL + A++L++ M + G+ P ++ Y L
Sbjct: 765 EEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLL 824
Query: 485 IQSL 488
+ L
Sbjct: 825 VCGL 828
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 101/236 (42%), Gaps = 39/236 (16%)
Query: 313 CQEDETVKLALDMLDDFSGEAR---KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
C E V L++ + + K ++ +++++ SL + + KT+ ++++
Sbjct: 131 CCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQI 190
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
P FN++++ Y K G++ A + GL PD +TYT L+ G+ ++ A E
Sbjct: 191 SPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYE 250
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCK-------------LEEFDC--------------- 461
+ + + + V+Y LI G C+ + E +C
Sbjct: 251 VFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALS 310
Query: 462 -------ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
AL L NEMK+ G +PNV Y LI LC K A K+L +M KGL
Sbjct: 311 GSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLC-KENKMDEARKMLSEMSEKGL 365
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 160/353 (45%), Gaps = 12/353 (3%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
++ L+K +C K+ D V G + V +LN L K+G+ + A ++
Sbjct: 204 ILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGL----CKIGETRCAIKL 259
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
D + Y I+ L + K+ + A+ +M G PD +I FC
Sbjct: 260 LRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCL 319
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
G+ A + K + P LI +LC+E + +K A ++L + E K +
Sbjct: 320 AGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGK-LKEAKNLLGVMTKEGVKPNVV 378
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
+S+++ C + +VH AK + M+ P +N +I+ K + AM +L+ M
Sbjct: 379 TYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREM 438
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP---VTYHTLIRGYCKL 456
+ + P+ TY L+ G G++ A +++ E H R P +TY +L+ G CK
Sbjct: 439 LHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKEL---HHRGQPADVITYTSLLDGLCKN 495
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
+ D A+ L +MK+ G+QPN Y LI LC K + A+KL + + +KG
Sbjct: 496 QNLDKAIALFMKMKERGIQPNKYTYTALIDGLC-KGARLKNAQKLFQHILVKG 547
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 140/311 (45%), Gaps = 37/311 (11%)
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC----------------KGGKAK 284
+L + K F A S+ ++M G PD + +I+ FC K G
Sbjct: 141 SLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQP 200
Query: 285 EAHVVYTLAR--------EKKMYPPQSVVA-----------FLISSLCQEDETVKLALDM 325
++ TL + +K ++ VVA L++ LC+ ET + A+ +
Sbjct: 201 NTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGET-RCAIKL 259
Query: 326 LDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSK 385
L + + + ++++I LC+ K V+ A ++M S G P ++++I +
Sbjct: 260 LRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCL 319
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
AG + A +L M + + PDVYTYT L+ G+++EA +L K + + VT
Sbjct: 320 AGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVT 379
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
Y TL+ GYC + E A ++ + M V P+V YN +I LC K A LL +M
Sbjct: 380 YSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLC-KGKSVDEAMNLLREM 438
Query: 506 RLKGLHLNGIT 516
K + N +T
Sbjct: 439 LHKNVVPNTVT 449
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 112/267 (41%), Gaps = 1/267 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K GK K A + G N TY ++ A + M++T
Sbjct: 348 LIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTE 407
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P +I+ CKG EA + K + P LI LC+ + A
Sbjct: 408 VNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGR-ITSA 466
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
LD++ + + + ++S++ LC+ +++ A L KM G P + ++I
Sbjct: 467 LDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDG 526
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
K + A ++ + + +G DVYTY ++ G G ++EA + ++ + N
Sbjct: 527 LCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPD 586
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEM 469
VT+ +IR + +E D A KLL+EM
Sbjct: 587 AVTFEIIIRSLFEKDENDKAEKLLHEM 613
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 78/153 (50%)
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+I F ++ SL +MK A +L +M +G P + +I+ + G M + +L
Sbjct: 131 SIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVL 190
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
+ G +P+ T LM G G+++++ ++ +++ V+Y TL+ G CK+
Sbjct: 191 GKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKI 250
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
E CA+KLL ++D +P+V YN +I LC
Sbjct: 251 GETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLC 283
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 171/366 (46%), Gaps = 10/366 (2%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA 216
T+ + L+ IC + KE D V +G V ++N L K+G+ +AA
Sbjct: 128 TTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGL----CKIGETRAA 183
Query: 217 FEVFNKFGDYGCVANQET--YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
++ K G + N + Y I +L + K A+ + +MI PD +I
Sbjct: 184 LQMLKKIE--GKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLI 241
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR 334
FC G+ KEA ++ K + P + L+ +LC+ D + A +ML +
Sbjct: 242 LGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCK-DGNITRAKNMLAVMMKQGV 300
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
+ +SS++ C + +V+ AK + S M G P +N +I+ K + A+
Sbjct: 301 IPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALS 360
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+ K M +G+ PD TY L+ G G++ A ++++E N +TY++LI C
Sbjct: 361 LFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLC 420
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG 514
K D A+ L+ ++KD G+QP++ YN LI LC K + A+ + +D+ +KG +N
Sbjct: 421 KNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLC-KGGRLKNAQDVFQDLLIKGYSVNA 479
Query: 515 ITRALI 520
T ++
Sbjct: 480 WTYNIM 485
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 173/363 (47%), Gaps = 12/363 (3%)
Query: 154 KWVTSGVV--DALLKAICSSVGKKEVYALWD--IVKEIGEKEKGVLTVEILNELIALFSK 209
K V + VV + ++ ++C + Y L+ I K I V N LI F
Sbjct: 193 KLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPD------VVTFNSLILGFCV 246
Query: 210 LGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEK 269
+G+ K AF +F++ + T+ ++AL + A ++ M++ G +PD
Sbjct: 247 VGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVT 306
Query: 270 VGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDF 329
++ +C + +A V++ + P +I+ L + + V AL + +
Sbjct: 307 YSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGL-GKIKMVDEALSLFKEM 365
Query: 330 SGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
+ ++S+I LC++ + A L+ +M + G P +NS+I K +
Sbjct: 366 CCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHI 425
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
A+ ++K ++ +G++P +YTY L+ G GG+++ A ++ + ++ TY+ +
Sbjct: 426 DKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIM 485
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
I G CK F+ A LL++M++ G+ P+ Y +I++L K + + AEKLL +M ++G
Sbjct: 486 INGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEK-AEKLLREMIIRG 544
Query: 510 LHL 512
L L
Sbjct: 545 LLL 547
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 128/268 (47%), Gaps = 4/268 (1%)
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
+A+S+ K+++ G P + +I+ C GK KEA + + Q LI
Sbjct: 112 FAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLI 171
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
+ LC+ ET + AL ML G+ + ++ +I SLC+ K V A L S+MI++
Sbjct: 172 NGLCKIGET-RAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRI 230
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
P FNS+I + G + A + M + + PDVYT++ L+ G + A
Sbjct: 231 SPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKN 290
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+L K VTY +L+ GYC + E + A + + M +GV P+ YN +I L
Sbjct: 291 MLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLG 350
Query: 490 -LKALDWRTAEKLLEDMRLKGLHLNGIT 516
+K +D A L ++M KG+ + +T
Sbjct: 351 KIKMVD--EALSLFKEMCCKGIAPDTVT 376
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 8/175 (4%)
Query: 323 LDMLDDFSGEARKYAIKP------FSSVIRSLCRMKDVH--GAKTLLSKMISEGPPPGNA 374
D+ +D S R ++P F+ ++ S+ + + H A +L ++ +G P
Sbjct: 36 FDVNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIV 95
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
FN +++ Y G+MT A + + G P T+ L++G G+++EA +
Sbjct: 96 TFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHV 155
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
L V+Y TLI G CK+ E AL++L +++ V +V YN +I SLC
Sbjct: 156 IALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLC 210
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 99/226 (43%), Gaps = 4/226 (1%)
Query: 289 VYTLAREKKMYPPQSVVAF--LISSLCQEDET-VKLALDMLDDFSGEARKYAIKPFSSVI 345
V + R +M P S+V F ++ S+ + + A+ + + I F+ ++
Sbjct: 42 VSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILV 101
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
C + ++ A ++ +K++ G P FN++I+ G + A+ + + G
Sbjct: 102 NCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFH 161
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
D +Y L++G G+ A ++L + + V Y+ +I CK + A +L
Sbjct: 162 LDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQL 221
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH 511
+EM + P+V +N LI C+ + A L +M LK ++
Sbjct: 222 YSEMITKRISPDVVTFNSLILGFCVVG-QLKEAFGLFHEMVLKNIN 266
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 160/360 (44%), Gaps = 10/360 (2%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L+ C + G Y ++ I+ + G + V +++ L + G+ A ++F
Sbjct: 234 SLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGL----CEAGRINEALKLFAD 289
Query: 223 FGDYGCVANQETYYFTIEALSR--RKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ C TY I ALS RK+ A ++ +M E G P+ +I CK
Sbjct: 290 MTEDNCCPTVRTYTVLIYALSGSGRKV--EALNLFNEMKEKGCEPNVHTYTVLIDGLCKE 347
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
K EA + + EK + P LI C+E + A ++LD + +
Sbjct: 348 NKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEG-MIDDAFEILDLMESNSCGPNTRT 406
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++ +I LC+ + VH A LL+KM+ P +NS+I K D+ A +L LM
Sbjct: 407 YNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMN 466
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
GL PD +TY+ + G++EEA + + K + + V Y LI GYCK+ + D
Sbjct: 467 ENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKID 526
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
A LL M + PN YN LI+ LC K + A L+ M G+ +T ++
Sbjct: 527 VAYSLLERMLNDACLPNSYTYNVLIEGLC-KEKKMKEASSLVAKMLTMGVKPTVVTYTIL 585
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 156/359 (43%), Gaps = 25/359 (6%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
NELI K K A + NK + + TY I + + A+ + M E
Sbjct: 408 NELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNE 467
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G +PD I CK G+ +EA ++ + K + + + LI C+ + +
Sbjct: 468 NGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGK-ID 526
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
+A +L+ +A ++ +I LC+ K + A +L++KM++ G P + +I
Sbjct: 527 VAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILI 586
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
K G A+++ M S G +PDV TYT + Y + G +EE +++ AK N
Sbjct: 587 GEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVI--AKMNEEG 644
Query: 441 LSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK------- 491
+ P VTY LI GY +L A L M D G +P++ + LI++L +
Sbjct: 645 ILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETR 704
Query: 492 ----------ALDWRTAEKLLEDMRLKGLHLN-GITRALIRAVKELEEDAIENGEALVE 539
L++ A KL E M G ++ I ALI +++ +E + LV
Sbjct: 705 SEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGF--CQQERLEEAQGLVH 761
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 129/279 (46%), Gaps = 4/279 (1%)
Query: 216 AFEVFNKF---GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGK 272
EVF K G++ Y + +LS+ + D +V +++ P+
Sbjct: 140 VLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNA 199
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
+++ +CK G EA + + + ++P LI C+ ++ V A ++ +
Sbjct: 200 MVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCR-NKGVDNAYEVFLIMPQK 258
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
+ ++++I LC ++ A L + M + P + +I A S +G A
Sbjct: 259 GCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEA 318
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
+ + M+ +G +P+V+TYT L+ G +M+EA ++L+E + S VTY+ LI G
Sbjct: 319 LNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDG 378
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
YCK D A ++L+ M+ PN YN+LI LC K
Sbjct: 379 YCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKK 417
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 166/413 (40%), Gaps = 41/413 (9%)
Query: 103 KLENVLSLLQSSVDGYLESSLDSFELDLHEDFVLKVLETPL----VLGENLVCFFKWVTS 158
K+ ++LL ++ L SL ++ +H + LE+ ++ EN + +W S
Sbjct: 419 KVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYS 478
Query: 159 GVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFE 218
+D L C +E L+D VK G K V I LI + K+GK A+
Sbjct: 479 VFIDTL----CKEGRVEEAGTLFDSVKAKGVKANEV----IYTALIDGYCKVGKIDVAYS 530
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+ + + C+ N TY IE L + K A S+ KM+ G P +I
Sbjct: 531 LLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEML 590
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQ-SVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
K G A V+ P + AFL + Q L+ +DD + +
Sbjct: 591 KDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQG------MLEEVDDVIAKMNEEG 644
Query: 338 IKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP-- 391
I P ++ +I R+ H A L M+ G P + + +I S M
Sbjct: 645 ILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETR 704
Query: 392 ----------------AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
A+++ + M G DV Y L++G+ ++EEA +++ K
Sbjct: 705 SEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMK 764
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ S Y++L+ CKL + A++L++ M + G+ P ++ Y L+ L
Sbjct: 765 ERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGL 817
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 110/257 (42%), Gaps = 40/257 (15%)
Query: 292 LAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR---KYAIKPFSSVIRSL 348
L R + + + + +I S C E V L++ + + K ++ +++++ SL
Sbjct: 111 LIRARLLGVAEKIRISMIKSCCS-IEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSL 169
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
+ + KT+ ++++ P FN++++ Y K G++ A + GL PD
Sbjct: 170 SKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDT 229
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK------------- 455
+TYT L+ G+ ++ A E+ + + + V+Y LI G C+
Sbjct: 230 FTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFAD 289
Query: 456 LEEFDC----------------------ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
+ E +C AL L NEMK+ G +PNV Y LI LC K
Sbjct: 290 MTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLC-KEN 348
Query: 494 DWRTAEKLLEDMRLKGL 510
A K+L +M KGL
Sbjct: 349 KMDEARKMLSEMSEKGL 365
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 166/377 (44%), Gaps = 41/377 (10%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
++K C + + + L +++++G V I LI K G + A F+K
Sbjct: 168 MIKGCCENGNLDKSFQLLGLLQDMGLSP----NVVIYTTLIDGCCKNGDIERARLFFDKM 223
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
G+ G VANQ T+ I L ++ + + + EKM G P+ +++ +C GK
Sbjct: 224 GEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKI 283
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
A ++ RE+ + LI +C+E E V A ++D A + +++
Sbjct: 284 CRAFDLFDEMRERGVEANVVTYNTLIGGMCRE-ERVWEAEKLVDQMKKAAVSPNLITYNT 342
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD--------------- 388
+I C + ++ A +LL ++ S G P +N +I YSKAG+
Sbjct: 343 LIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRG 402
Query: 389 --------------------MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
M A ++ M GL PDVY Y L+ G G M+E+
Sbjct: 403 ISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESS 462
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
++ + H S V Y+T+I GYCK + AL+LL EM+ G+ PNV Y+ +I L
Sbjct: 463 KLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVL 522
Query: 489 CLKALDWRTAEKLLEDM 505
C K W AE LL+ M
Sbjct: 523 C-KDGKWEEAEVLLDKM 538
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 144/316 (45%), Gaps = 8/316 (2%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A FN+ D G V + + +L R F+ AW ++ E D G +I
Sbjct: 112 ALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFFNELKERVKF-DVYSFGIMIK 170
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED--ETVKLALDMLDDFSGEA 333
C+ G ++ + L ++ + P + LI C+ E +L D + + A
Sbjct: 171 GCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVA 230
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
+Y F+ +I L + L KM G P +N +++ Y G + A
Sbjct: 231 NQYT---FTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAF 287
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
++ MR RG++ +V TY L+ G ++ EA +++++ KK + +TY+TLI G+
Sbjct: 288 DLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGF 347
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
C + D A LL+++K G+ P++ YN LI+ KA +W+ L +M +G+ +
Sbjct: 348 CDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYS-KAGNWKGVADLAREMEGRGISPS 406
Query: 514 GIT-RALIRAVKELEE 528
+T LI A L+E
Sbjct: 407 KVTCTVLIDAYVRLQE 422
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 5/190 (2%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI +SK G K ++ + G ++ T I+A R + + A+ + M +
Sbjct: 376 NILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEK 435
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G +PD G +I C G KE+ ++ E + P + +I C+ED + +
Sbjct: 436 FGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYR 495
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
AL +L + + + +SS+I LC+ A+ LL KMI P ++ N +
Sbjct: 496 -ALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNMI- 553
Query: 381 SAYSKAGDMT 390
SKA + T
Sbjct: 554 ---SKAKNFT 560
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 9/163 (5%)
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGL--KPDVYTYTGLMSGYANGGQMEEACEILN 432
++ S+I+A+ K+ + A+ M +GL +P+++ L+ E+A N
Sbjct: 95 LYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFN--SLLGSLVRSNCFEKAWLFFN 152
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
E K+ + ++ +I+G C+ D + +LL ++D+G+ PNV Y LI C K
Sbjct: 153 ELKE-RVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDG-CCKN 210
Query: 493 LDWRTAEKLLEDMRLKGLHLNGIT-RALIRAV--KELEEDAIE 532
D A + M GL N T LI + K L++D +
Sbjct: 211 GDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFD 253
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 142/313 (45%), Gaps = 2/313 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V L +I F L + F V K G + T+ I L A + +
Sbjct: 109 VYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFD 168
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
KM+ G P+ G +I CK G ++ A + +K P +I L + D
Sbjct: 169 KMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFK-D 227
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
V AL++ + + + ++S+I LC+ + TL+++M+ P +F
Sbjct: 228 RQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIF 287
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
+++ A K G +T A +++ +M RG++PDV TYT LM G+ +M+EA ++ + +
Sbjct: 288 TTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVR 347
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ ++Y TLI GYCK++ D A+ L EM + PN+ YN LI LC R
Sbjct: 348 KGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLC-HVGRLR 406
Query: 497 TAEKLLEDMRLKG 509
A L +M G
Sbjct: 407 DAIALFHEMVASG 419
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 152/349 (43%), Gaps = 6/349 (1%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
L++ +C E L+D + G + GV LI K+G +AA +
Sbjct: 149 TLIRGLCVEGKIGEALHLFDKMVGEGFQPNGV----TYGTLIHGLCKVGNSRAAIRLLRS 204
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
C N TY I+ L + + + A ++ +MI G P+ II CK +
Sbjct: 205 MVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSE 264
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
K + + K+ P + L+ +LC+E V +A D++D + + ++
Sbjct: 265 WKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEG-MVTIAHDVVDVMIQRGVEPDVVTYT 323
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+++ C ++ A + M+ +G P ++++I+ Y K + AM + + M R
Sbjct: 324 ALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQR 383
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
L P++ TY L+ G + G++ +A + +E + VTY L+ CK D A
Sbjct: 384 ELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQA 443
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH 511
+ +L ++ + P++ YN +I +C + + A L + KGLH
Sbjct: 444 MAMLKAIEGSNLAPDIQSYNIVIDGMC-RVGELEAAGDLFSSLSSKGLH 491
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 129/307 (42%), Gaps = 1/307 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V I L+ K G A +V + G + TY ++ R D A V +
Sbjct: 284 VVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFD 343
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
M+ G P+ +I+ +CK + +A ++ ++++ P LI LC
Sbjct: 344 TMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVG 403
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
++ A+ + + + + + ++ LC+ + + A +L + P +
Sbjct: 404 R-LRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSY 462
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N VI + G++ A ++ + S+GL PDV+TYT +++G G + EA ++ E
Sbjct: 463 NIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNT 522
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ TY+ + RG+ + E A++LL EM G + +++ L LD
Sbjct: 523 DGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQS 582
Query: 497 TAEKLLE 503
+ L E
Sbjct: 583 VKQILHE 589
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 122/278 (43%), Gaps = 2/278 (0%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
+ +++ K + S+ ++M G D + +I+ FC + V +
Sbjct: 81 LTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGH 140
Query: 299 YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
P + LI LC E + + AL + D GE + + ++I LC++ + A
Sbjct: 141 QPDTATFTTLIRGLCVEGK-IGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAI 199
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
LL M+ + P +N++I K + A+ + M ++G+ P+V TY ++ G
Sbjct: 200 RLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGL 259
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
+ + ++NE + + V + TL+ CK A +++ M GV+P+V
Sbjct: 260 CKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDV 319
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
Y L+ CL++ + A+K+ + M KG N I+
Sbjct: 320 VTYTALMDGHCLRS-EMDEADKVFDTMVRKGCAPNVIS 356
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 1/156 (0%)
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
++M+ PPP F ++++ + + + + K M S G+ DVYT +++ + +
Sbjct: 62 FNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCH 121
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
+++ +L + K + T+ TLIRG C + AL L ++M G QPN
Sbjct: 122 LNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVT 181
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
Y LI LC K + R A +LL M K N IT
Sbjct: 182 YGTLIHGLC-KVGNSRAAIRLLRSMVQKNCEPNVIT 216
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 80/177 (45%), Gaps = 1/177 (0%)
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
++ F+ ++ S+ MK +L +M S G P VI+++ + +L
Sbjct: 73 SVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVL 132
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
+ G +PD T+T L+ G G++ EA + ++ + + VTY TLI G CK+
Sbjct: 133 AKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKV 192
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
A++LL M +PNV YN +I L K A + +M KG+ N
Sbjct: 193 GNSRAAIRLLRSMVQKNCEPNVITYNTIIDCL-FKDRQVNEALNIFSEMIAKGISPN 248
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 179/398 (44%), Gaps = 57/398 (14%)
Query: 176 EVYALWDIVK---EIGEKEKGV-LTVE-----------ILNELIALFSKLGKGKAAFEVF 220
+VY+ ++K E GE EK L VE I LI K G+ + A ++F
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ G +G VAN+ TY I L + I + + EKM E G P+ +++ CK
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKD 281
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
G+ K+A V+ RE+ + LI LC+E + + A +++D + +
Sbjct: 282 GRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANE-ANEVMDQMKSDGINPNLIT 340
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++++I C ++ + A +L + S G P +N ++S + K GD + A +++K M
Sbjct: 341 YNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEME 400
Query: 401 SRGLK-----------------------------------PDVYTYTGLMSGYANGGQME 425
RG+K PDV+TY+ L+ G+ G+M
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMN 460
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
EA + + + V Y+T++ GYCK AL+L EM++ + PNV Y +I
Sbjct: 461 EASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMI 520
Query: 486 QSLCLKALDWRTAEKLLEDMRLKGLH-----LNGITRA 518
+ LC K + AE L+E M G+ LN I+RA
Sbjct: 521 EVLC-KERKSKEAEGLVEKMIDSGIGPSDSILNLISRA 557
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 154/334 (46%), Gaps = 4/334 (1%)
Query: 172 VGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVAN 231
VG W E K K VL V +I + G+ + +F++ + ++G N
Sbjct: 140 VGSSSFNQWWCFFNE--SKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPN 197
Query: 232 QETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYT 291
Y I+ ++ + A + +M + G + + +I K G K+ +Y
Sbjct: 198 VVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYE 257
Query: 292 LAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRM 351
+E ++P +++ LC++ T K A + D+ I ++++I LCR
Sbjct: 258 KMQEHGVFPNLHTYNCVMNQLCKDGRT-KDAFKVFDEMRERGVSCNIVTYNTLIGGLCRE 316
Query: 352 KDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTY 411
+ A ++ +M S+G P +N++I + + A+ + + ++SRGL P + TY
Sbjct: 317 MKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTY 376
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
L+SG+ G A +++ E ++ + S VTY LI + + + + A++L + M++
Sbjct: 377 NILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEE 436
Query: 472 VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
+G+ P+V Y+ LI C+K A +L + M
Sbjct: 437 LGLTPDVHTYSVLIHGFCIKG-RMNEASRLFKSM 469
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 142/318 (44%), Gaps = 29/318 (9%)
Query: 235 YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR 294
Y I A + + D + +M++ G +P S ++++ + +
Sbjct: 97 YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQW---WCFFN 153
Query: 295 EKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSL 348
E K+ V +F +I C+ E K + D+L E R++ P ++++I
Sbjct: 154 ESKIKVVLDVYSFGIVIKGCCEAGEIEK-SFDLLV----ELREFGFSPNVVIYTTLIDGC 208
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
C+ ++ AK L +M G + +I K G EM + M+ G+ P++
Sbjct: 209 CKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNL 268
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNE 468
+TY +M+ G+ ++A ++ +E ++ + VTY+TLI G C+ + + A +++++
Sbjct: 269 HTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQ 328
Query: 469 MKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI-------- 520
MK G+ PN+ YN LI C A L D++ +GL + +T ++
Sbjct: 329 MKSDGINPNLITYNTLIDGFC-GVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKG 387
Query: 521 ------RAVKELEEDAIE 532
+ VKE+EE I+
Sbjct: 388 DTSGAGKVVKEMEERGIK 405
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 332 EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS------------- 378
E K + + +I + + + + + ++M+ +G PG+ FN+
Sbjct: 88 ETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQ 147
Query: 379 ---------------------VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
VI +AG++ + ++L +R G P+V YT L+ G
Sbjct: 148 WWCFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDG 207
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
G++E+A ++ E K + TY LI G K ++ +M++ GV PN
Sbjct: 208 CCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPN 267
Query: 478 VDEYNKLIQSLCLKALDWRT--AEKLLEDMRLKGLHLNGIT 516
+ YN ++ LC D RT A K+ ++MR +G+ N +T
Sbjct: 268 LHTYNCVMNQLC---KDGRTKDAFKVFDEMRERGVSCNIVT 305
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 134/293 (45%), Gaps = 1/293 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V LN LI F L + AF V K GC + ++ I+ L A + +
Sbjct: 109 VYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFD 168
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
KMI G PD +I+ CK G A + + P V LI SLC++
Sbjct: 169 KMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDR 228
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ + A ++ + + I +S++ +LC + + TLL++M+ P
Sbjct: 229 QQTQ-AFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISL 287
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
+V+ A K G + A +++ +M G++PDV TYT L+ G+ +M+EA ++ +
Sbjct: 288 TTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVH 347
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ +Y+TLI GYCK+E D A+ L EM + PN YN LI LC
Sbjct: 348 KGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLC 400
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 131/306 (42%), Gaps = 2/306 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
L ++ K G A +V + G + TY I+ R D A V + M+
Sbjct: 287 LTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMV 346
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
G P+ +I+ +CK + +A ++ +K+ P LI LC +
Sbjct: 347 HKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGR-L 405
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
+ A+ + + + + + ++ LC+ + A LL + P ++ V
Sbjct: 406 QDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIV 465
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I +AG++ A ++ + S+GLKP+V+TY + G G ++EA ++ E +N
Sbjct: 466 IDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENAC 525
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
TY+T+ +G+ + E A++LL EM G +V L+ L LD A
Sbjct: 526 SADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGLDQSEAH 585
Query: 500 KLLEDM 505
K LEDM
Sbjct: 586 K-LEDM 590
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 104/245 (42%), Gaps = 7/245 (2%)
Query: 248 FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP-PQSVVA 306
D A S +M+ P KI++ K K V +L+R+ + P +V
Sbjct: 55 LDDALSSFNRMLHMHPPPSIVDFAKILTSI---TKVKRYSTVLSLSRKMDSFGIPHNVYT 111
Query: 307 F--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM 364
LI+S C + V A +L + F+++I+ LC + A L KM
Sbjct: 112 LNVLINSFCHLNR-VNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKM 170
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
I EG P ++ ++I+ K G + A+ +L+ M +PDV Y L+ Q
Sbjct: 171 IWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQ 230
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
+A + +E + VT ++L+ C L E+ LLNEM D + PN +
Sbjct: 231 TQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTV 290
Query: 485 IQSLC 489
+ +LC
Sbjct: 291 VDALC 295
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 155/303 (51%), Gaps = 6/303 (1%)
Query: 226 YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKE 285
+G N TY + AL R + A V M G P++ +++ FC+ G+
Sbjct: 146 HGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDG 205
Query: 286 AHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
A V +L RE+ P ++V F +++ LC+ ++ A + D+ E + +++
Sbjct: 206 AERVVSLMREEGNAKP-NLVTFNSMVNGLCKAGR-MEGARKVFDEMVREGLAPDVVSYNT 263
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
++ C++ +H + + S+M G P F S+I A KAG++ A+ ++ MR RG
Sbjct: 264 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 323
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
L+ + T+T L+ G+ G +++A + E +K + S V Y+ LI GYCKL D A
Sbjct: 324 LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAR 383
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRA 522
+L+ EM+ V+P+V Y+ +I C K + +A +L + M KG+ + IT +LIR
Sbjct: 384 ELIREMEAKRVKPDVVTYSTIISGYC-KVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 442
Query: 523 VKE 525
+ E
Sbjct: 443 LCE 445
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 167/360 (46%), Gaps = 7/360 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L++A+C+ +E + ++ G V N L+A F + G+ A V +
Sbjct: 156 NILVRALCARGRLEEAVGVVGDMRGAGCAPNAV----TYNTLVAAFCRAGELDGAERVVS 211
Query: 222 KFGDYGCV-ANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ G N T+ + L + + A V ++M+ G PD ++S +CK
Sbjct: 212 LMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKV 271
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
G E+ V++ ++ + P LI + C+ ++ A+ ++ +
Sbjct: 272 GCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAG-NLEQAVALVAQMRERGLRMNEVT 330
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F+++I C+ + A + +M G P +N++I+ Y K G M A E+++ M
Sbjct: 331 FTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREME 390
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
++ +KPDV TY+ ++SGY G ++ A ++ + K +TY +LIRG C+ + +
Sbjct: 391 AKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLN 450
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
A +L M +GVQP+ Y LI C K + A L ++M KG+ + +T +++
Sbjct: 451 DACELFENMLQLGVQPDEFTYTTLIDGHC-KEGNVEKALSLHDEMIRKGVLPDVVTYSVL 509
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 162/347 (46%), Gaps = 17/347 (4%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ A C + + +++E G + ++T N ++ K G+ + A +VF+
Sbjct: 191 NTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVT---FNSMVNGLCKAGRMEGARKVFD 247
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ G + +Y + + + +V +M + G +PD +I CK G
Sbjct: 248 EMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAG 307
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED--ETVKLALDMLDDFSGEARKYAIK 339
++A + RE+ + + LI C++ + LA++ E RK I+
Sbjct: 308 NLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVE-------EMRKCGIQ 360
Query: 340 P----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
P ++++I C++ + A+ L+ +M ++ P ++++IS Y K G++ A ++
Sbjct: 361 PSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQL 420
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
+ M +G+ PD TY+ L+ G ++ +ACE+ + + TY TLI G+CK
Sbjct: 421 NQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCK 480
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
+ AL L +EM GV P+V Y+ LI L K+ + A +LL
Sbjct: 481 EGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLS-KSARTKEAHRLL 526
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 111/219 (50%), Gaps = 3/219 (1%)
Query: 299 YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
Y P SV A+ L D ++ A L + ++ ++R+LC + A
Sbjct: 114 YAP-SVPAYNAVLLALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAV 172
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG-LKPDVYTYTGLMSG 417
++ M G P +N++++A+ +AG++ A ++ LMR G KP++ T+ +++G
Sbjct: 173 GVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNG 232
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
G+ME A ++ +E + V+Y+TL+ GYCK+ +L + +EM G+ P+
Sbjct: 233 LCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPD 292
Query: 478 VDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
V + LI + C KA + A L+ MR +GL +N +T
Sbjct: 293 VVTFTSLIHATC-KAGNLEQAVALVAQMRERGLRMNEVT 330
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 147/312 (47%), Gaps = 7/312 (2%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L++ + K+G + VF++ G V + T+ I A + + A ++ +M E
Sbjct: 262 NTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRE 321
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDET 318
G + +I FCK G +A + R+ + P SVV + LI+ C+
Sbjct: 322 RGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQP--SVVCYNALINGYCKLGR- 378
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+ LA +++ + + K + +S++I C++ ++ A L KM+ +G P ++S
Sbjct: 379 MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSS 438
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I + + A E+ + M G++PD +TYT L+ G+ G +E+A + +E +
Sbjct: 439 LIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKG 498
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
VTY LI G K A +LL ++ P+ +Y+ L+ LC ++++
Sbjct: 499 VLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM--LCCSKAEFKSV 556
Query: 499 EKLLEDMRLKGL 510
LL+ +KGL
Sbjct: 557 VALLKGFCMKGL 568
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 3/171 (1%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F ++IRS + A L+ S G P +N+V+ A S A + A L M
Sbjct: 86 FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALSDA-SLPSARRFLSSML 144
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G+ P+VYTY L+ G++EEA ++ + + + VTY+TL+ +C+ E D
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 204
Query: 461 CALKLLNEMKDVG-VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
A ++++ M++ G +PN+ +N ++ LC KA A K+ ++M +GL
Sbjct: 205 GAERVVSLMREEGNAKPNLVTFNSMVNGLC-KAGRMEGARKVFDEMVREGL 254
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 128/346 (36%), Gaps = 59/346 (17%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V LI K G + A + + + G N+ T+ I+ ++ D A E
Sbjct: 293 VVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVE 352
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M + G P +I+ +CK G+ A + K++ P + +IS C+
Sbjct: 353 EMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVG 412
Query: 317 ETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
LD + + K + P +SS+IR LC K ++ A L M+ G P
Sbjct: 413 N-----LDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPD 467
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL- 431
+ ++I + K G++ A+ + M +G+ PDV TY+ L++G + + +EA +L
Sbjct: 468 EFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLF 527
Query: 432 ------------------------------------------NEAKKNHS-------RLS 442
EA K + +L
Sbjct: 528 KLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLD 587
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
Y LI G+C+ AL +M G PN L++ L
Sbjct: 588 GSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGL 633
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 150/314 (47%), Gaps = 2/314 (0%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+ LI F KLG +AA+++F++ V + Y I L R A V KM
Sbjct: 82 VYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKM 141
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
G PD +I +CK G+ ++A ++ + + P L LC+ +
Sbjct: 142 FSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQ- 200
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
V A ++L + G+ + I ++S++ LC+ ++ A L+ +M G P F +
Sbjct: 201 VDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTT 260
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
++ AY K G+M A E+L+ M RGL+P V T+ LM+G+ G +E+ +L +
Sbjct: 261 LMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKG 320
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
+ TY++L++ YC C ++ M GV P+ + YN LI+ C KA + + A
Sbjct: 321 IMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHC-KARNMKEA 379
Query: 499 EKLLEDMRLKGLHL 512
L ++M KG +L
Sbjct: 380 WFLHKEMAEKGFNL 393
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 132/262 (50%), Gaps = 16/262 (6%)
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DET 318
G PD +I+ +C GG+ ++ + + K + P +I LC+ D+
Sbjct: 5 GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDA 64
Query: 319 VKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
++ +M++ I P ++++I C++ ++ A L +M + P
Sbjct: 65 ERVLREMINQ--------GIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFI 116
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
+ +VI + G M A ++ M SRG++PD TYT L+ GY G+ME+A + N+
Sbjct: 117 AYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQM 176
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
++ + VTY L G CKL + D A +LL+EM G+Q N+ YN L+ LC K+ +
Sbjct: 177 VQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLC-KSGN 235
Query: 495 WRTAEKLLEDMRLKGLHLNGIT 516
R A KL+E+M + G++ + IT
Sbjct: 236 IRQAVKLMEEMEVAGMYPDTIT 257
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 122/261 (46%), Gaps = 2/261 (0%)
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
++M G P+ II CK GK +A V + + P V LI C+
Sbjct: 34 QEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKL 93
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
++ A + D+ + +++VI LCR + A + +KM S G P
Sbjct: 94 G-NIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVT 152
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+ ++I Y K+G+M A + M GL P+V TYT L G GQ++ A E+L+E
Sbjct: 153 YTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMC 212
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+L+ TY++L+ G CK A+KL+ EM+ G+ P+ + L+ + C K +
Sbjct: 213 GKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYC-KTGEM 271
Query: 496 RTAEKLLEDMRLKGLHLNGIT 516
A +LL +M +GL IT
Sbjct: 272 VKAHELLREMLDRGLQPTVIT 292
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 127/283 (44%), Gaps = 1/283 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + K G+ + AF + N+ G N TY + L + D A + +M G
Sbjct: 156 LIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKG 215
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+ +++ CK G ++A + MYP L+ + C+ E VK A
Sbjct: 216 LQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVK-A 274
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++L + + + F+ ++ C + + LL+ M+ +G P +NS++
Sbjct: 275 HELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQ 334
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y +M E+ K M +RG+ PD TY L+ G+ M+EA + E + L+
Sbjct: 335 YCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLT 394
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
+Y+++I+G+ K ++ A +L EM+ G+ + + YN +
Sbjct: 395 ASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFV 437
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 73/140 (52%), Gaps = 6/140 (4%)
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M+ RG PDV +Y+ +++GY GG++++ +++ E + + + TY+++I CK +
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG-----LHLN 513
D A ++L EM + G+ P+ Y LI C K + + A KL ++M + +
Sbjct: 61 VDDAERVLREMINQGIVPDTVVYTTLIDGFC-KLGNIQAAYKLFDEMEKQRIVPDFIAYT 119
Query: 514 GITRALIRAVKELEEDAIEN 533
+ L R K +E D + N
Sbjct: 120 AVICGLCRCGKMMEADKVFN 139
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 147/336 (43%), Gaps = 37/336 (11%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG------------- 262
AF VF++ GC N TY I L D A + E+MIE G
Sbjct: 294 AFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPIT 353
Query: 263 ----------------------SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP 300
P+ + +IS + GK + A +Y ++ + P
Sbjct: 354 ALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVP 413
Query: 301 PQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTL 360
LI+ LC AL + G + ++ +I+ LC D+ A L
Sbjct: 414 NTVTYNALINELCVGGR-FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVL 472
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
KM+ GP P +N++I+ Y G++ A +L LM+ G +PD +TY L+SG++
Sbjct: 473 FEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSK 532
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
G++E A E + +PV+Y TLI G+ K + D AL LL M+++G PNV+
Sbjct: 533 WGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVES 592
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
YN +I L K + AEK+ + M +GL N IT
Sbjct: 593 YNAVINGLS-KENRFSEAEKICDKMAEQGLLPNVIT 627
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 152/325 (46%), Gaps = 10/325 (3%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
V+ LI+ S+LGK + A +++K G V N TY I L F A +
Sbjct: 379 NVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIF 438
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLC 313
M GSL +++ +II C GG ++A V++ + KM P +VV + LI+
Sbjct: 439 HWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLF--EKMLKMGPLPTVVTYNTLINGYL 496
Query: 314 QEDETVKLA--LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
+ A LD++ + E ++ ++ ++ + + A +M+ G P
Sbjct: 497 TKGNVNNAARLLDLMKENGCEPDEWT---YNELVSGFSKWGKLESASFYFQEMVECGLNP 553
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+ ++I +SK G + A+ +L+ M G P+V +Y +++G + + EA +I
Sbjct: 554 NPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKIC 613
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
++ + + +TY TLI G C+ A K+ ++M+ PN+ Y+ LI LC +
Sbjct: 614 DKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQE 673
Query: 492 ALDWRTAEKLLEDMRLKGLHLNGIT 516
AE LL++M KGL + +T
Sbjct: 674 G-KADEAEILLKEMERKGLAPDEVT 697
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 111/229 (48%), Gaps = 6/229 (2%)
Query: 266 DSEKVGKIISWFCKGGKAKEAHVVYT-----LAREKKMYPPQSVVAFLISSLCQEDETVK 320
D+E V + W K K + L R++ ++ P + L+ C+ +E ++
Sbjct: 129 DTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDR-VFAPADHIRILMIKACRNEEEIR 187
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
D L++ SG +++ ++++ L + + V GA+ L +M++ G P FN++I
Sbjct: 188 RVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLI 247
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ SK G + A +L + L PDV+TYT L+ G+ ++ A + + K
Sbjct: 248 NILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCD 307
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ VTY TLI G C D AL +L EM + G++P V Y I +LC
Sbjct: 308 PNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALC 356
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 142/331 (42%), Gaps = 34/331 (10%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI SK GK A + + + GC N E+Y I LS+ F A +C+KM E G
Sbjct: 561 LIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQG 620
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
LP+ +I C+ G+ + A ++ ++K P + LI LCQE +
Sbjct: 621 LLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKA---- 676
Query: 323 LDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
D + E + + P F+S+I + + A LL +M+ G P ++
Sbjct: 677 -DEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSV 735
Query: 379 VI------------------------SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
++ S + K + +L M G +P + TY+ L
Sbjct: 736 LLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTL 795
Query: 415 MSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV 474
+SG G+ EA +++ + K+ Y++L+ +CK E D ALK+ + ++ G
Sbjct: 796 VSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGF 855
Query: 475 QPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
Q ++ Y LI +LC KA A+ L ++M
Sbjct: 856 QLHLSIYRALICALC-KAGQVEEAQALFDNM 885
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 125/264 (47%), Gaps = 2/264 (0%)
Query: 242 LSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPP 301
L++ ++ + A ++ ++M+ +G P +I+ K GK +EA ++ + + + P
Sbjct: 215 LAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPD 274
Query: 302 QSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLL 361
LI C+ + + LA + D E +S++I LC V A +L
Sbjct: 275 VFTYTSLILGHCR-NRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDML 333
Query: 362 SKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG 421
+MI +G P + I+A A+E++ M+ RG +P+V TYT L+SG +
Sbjct: 334 EEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRL 393
Query: 422 GQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEY 481
G++E A + ++ K + VTY+ LI C F ALK+ + M+ G N Y
Sbjct: 394 GKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTY 453
Query: 482 NKLIQSLCLKALDWRTAEKLLEDM 505
N++I+ LCL D A L E M
Sbjct: 454 NEIIKGLCLGG-DIEKAMVLFEKM 476
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 132/310 (42%), Gaps = 37/310 (11%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N LI + SK GK + A + ++ Y + TY I R + D A+ V ++M+
Sbjct: 243 FNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMV 302
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G P+S +I+ C G+ E
Sbjct: 303 KEGCDPNSVTYSTLINGLCNEGRVDE---------------------------------- 328
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
ALDML++ + + + ++ I +LC ++ A L+++M G P + ++
Sbjct: 329 --ALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTAL 386
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
IS S+ G + A+ + M GL P+ TY L++ GG+ A +I + + + S
Sbjct: 387 ISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGS 446
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
+ TY+ +I+G C + + A+ L +M +G P V YN LI K + A
Sbjct: 447 LANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKG-NVNNAA 505
Query: 500 KLLEDMRLKG 509
+LL+ M+ G
Sbjct: 506 RLLDLMKENG 515
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 134/333 (40%), Gaps = 34/333 (10%)
Query: 190 KEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
KE V N LI G+ A ++F+ +G +AN +TY I+ L +
Sbjct: 408 KEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIE 467
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A + EKM++ G LP +I+ + G A + L +E P + L+
Sbjct: 468 KAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELV 527
Query: 310 SSLCQ----------------------------------EDETVKLALDMLDDFSGEARK 335
S + +D V +AL +L+
Sbjct: 528 SGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCN 587
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
++ +++VI L + A+ + KM +G P + ++I + G A ++
Sbjct: 588 PNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKI 647
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
M R P++YTY+ L+ G G+ +EA +L E ++ VT+ +LI G+
Sbjct: 648 FHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVV 707
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
L D A LL M DVG +PN Y+ L++ L
Sbjct: 708 LGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGL 740
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 128/315 (40%), Gaps = 24/315 (7%)
Query: 191 EKGVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
E+G+L V LI + G+ + AF++F+ C+ N TY I L + D
Sbjct: 618 EQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKAD 677
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A + ++M G PD +I F G+ A ++ + P + L+
Sbjct: 678 EAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLL 737
Query: 310 SSLCQE----DETVKLALDMLDDFSGEARKY-------------------AIKPFSSVIR 346
L +E +E V + + + FS + + +S+++
Sbjct: 738 KGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVS 797
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
LCR + A+ L+ M G P ++ S++ A+ K ++ A+++ + ++G +
Sbjct: 798 GLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQL 857
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
+ Y L+ GQ+EEA + + + + + L+ G K E D +KLL
Sbjct: 858 HLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLL 917
Query: 467 NEMKDVGVQPNVDEY 481
+ M+ PN+ Y
Sbjct: 918 HIMESKNFTPNIQTY 932
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 103/250 (41%), Gaps = 26/250 (10%)
Query: 190 KEKGVLTVEI-LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKI- 247
+ KG+ E+ LI F LG+ AF + + D GC N TY ++ L + +
Sbjct: 687 ERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLL 746
Query: 248 -----------------------FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAK 284
F+ ++ +M E G P + ++S C+ G+
Sbjct: 747 LEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFY 806
Query: 285 EAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSV 344
EA + +E+ P + + L+ + C+ E V AL + + + + + ++
Sbjct: 807 EAEQLVKDMKERGFCPDREIYYSLLIAHCKNLE-VDHALKIFHSIEAKGFQLHLSIYRAL 865
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
I +LC+ V A+ L M+ + V+ ++ K G++ M++L +M S+
Sbjct: 866 ICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNF 925
Query: 405 KPDVYTYTGL 414
P++ TY L
Sbjct: 926 TPNIQTYVIL 935
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 136/288 (47%), Gaps = 1/288 (0%)
Query: 202 ELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET 261
+L+ +K+ + K +G + T I + D+A SV K+++
Sbjct: 61 KLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKL 120
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
G PD+ ++ C GK EA V+ + P L++ LC+ D +
Sbjct: 121 GHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCK-DRQLTE 179
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
AL++ + + I ++S+I +LC + + TLL++M+ P N V+
Sbjct: 180 ALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVD 239
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
A K G +T A +++ +M G++PDV TY LM G+ +M+EA ++ + +N
Sbjct: 240 ALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVC 299
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ V+Y+TLI GYCK++ D A+ L EM + PN Y+ LI LC
Sbjct: 300 NVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLC 347
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 161/368 (43%), Gaps = 11/368 (2%)
Query: 145 LGENLVCFFKWVTSGV------VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVE 198
L E L F + + G+ ++L+ A+C+ K V L + + K K + V
Sbjct: 177 LTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMV----KSKIMPNVV 232
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
LN ++ K GK A +V + G + TY ++ R D A V + M
Sbjct: 233 SLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMM 292
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+ G + + +I+ +CK + +A ++ +++ P + LI LC
Sbjct: 293 VRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGR- 351
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
++ A+ + ++ + + +S ++ LC+ + A LL + P V+N
Sbjct: 352 LQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNI 411
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
I +AGD+ A ++ + RGL+PDV+T+ ++ G G ++EA ++ E +N
Sbjct: 412 AIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENG 471
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
+ TY+T+ +G + + A++LL EM G +V L++ L LD
Sbjct: 472 CLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDGLDQSVK 531
Query: 499 EKLLEDMR 506
+ L E MR
Sbjct: 532 QILCEFMR 539
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 103/214 (48%), Gaps = 15/214 (7%)
Query: 300 PPQSVVAFLISSLCQED-ETVKLALDMLDD-FSGEARKYAIKP------FSSVIRSLCRM 351
PP FL SS Q + ++ L + LDD S R + P F+ ++ S+ +M
Sbjct: 16 PPH----FLSSS--QNNFQSKSLHFNTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKM 69
Query: 352 KDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTY 411
K +L KM S G PP VI+++ + A+ +L + G +PD T+
Sbjct: 70 KHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATF 129
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
T L+ G G++ EA ++ ++ + + VTY TL+ G CK + AL L +EM
Sbjct: 130 TTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIA 189
Query: 472 VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
G+ P++ YN LI +LC +W+ LL +M
Sbjct: 190 KGISPDIFTYNSLIHALC-NLCEWKHVTTLLNEM 222
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 123/274 (44%), Gaps = 12/274 (4%)
Query: 248 FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM----YPPQS 303
D A S +M+ P + K+++ AK H L+ KKM PP
Sbjct: 37 LDDALSSFHRMLHMHPPPPIFEFAKLLTSI-----AKMKHYSTVLSLSKKMDSFGIPPDV 91
Query: 304 -VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLS 362
+ +I+S C + V AL +L + F++++R LC + + A +
Sbjct: 92 YTLTIVINSFCHLNR-VDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFD 150
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG 422
KM+ EG P + ++++ K +T A+ + M ++G+ PD++TY L+ N
Sbjct: 151 KMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLC 210
Query: 423 QMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
+ + +LNE K+ + V+ + ++ CK + A +++ M GV+P+V Y
Sbjct: 211 EWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYA 270
Query: 483 KLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
L+ CL++ + A K+ + M G N ++
Sbjct: 271 ALMDGHCLRS-EMDEAVKVFDMMVRNGCVCNVVS 303
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 2/167 (1%)
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG 422
+M+ PPP F ++++ +K + + + K M S G+ PDVYT T +++ + +
Sbjct: 46 RMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLN 105
Query: 423 QMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
+++ A +L + K + T+ TL+RG C + + AL + ++M G QPNV Y
Sbjct: 106 RVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYG 165
Query: 483 KLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAVKELEE 528
L+ LC K A L +M KG+ + T +LI A+ L E
Sbjct: 166 TLMNGLC-KDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCE 211
>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Cucumis sativus]
Length = 962
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 156/348 (44%), Gaps = 14/348 (4%)
Query: 178 YALWDIVKEIGEKEKGVLTVEILNE------------LIALFSKLGKGKAAFEVFNKFGD 225
+ + D +G+++K +L E E LI L++KLGK A EV +
Sbjct: 455 HTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEH 514
Query: 226 YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKE 285
G N +TY I + K + A+++ E +I+ G PD II+ FC GK
Sbjct: 515 AGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDR 574
Query: 286 AHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVI 345
A ++++ P +I ++ E +K ALD+ D + ++++I
Sbjct: 575 AVCTVKEMQKQRHKPTTRTFMPIIHGFARKGE-MKKALDVFDMMRMSGCIPTVHTYNALI 633
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
L + + A+ +L +M G P + +++ Y+ GD A +R GL+
Sbjct: 634 LGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQ 693
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
DVYTY L+ G+M+ A + E + + Y+ LI G+ + + A L
Sbjct: 694 LDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADL 753
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
+ +MK GVQP++ Y I + C KA D + A K +E+M+ G+ N
Sbjct: 754 MQQMKREGVQPDIHTYTSFINA-CSKAGDMQRATKTIEEMKSVGVKPN 800
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 186/417 (44%), Gaps = 61/417 (14%)
Query: 77 NEYAQMDPSADAVE-SKEEEAYEIDGDKLENVLSLLQSSVDGYLESSLDSFELDLHEDFV 135
N YA++ + A+E SKE E I + S+L ++G+L+ + + ED +
Sbjct: 494 NLYAKLGKVSKALEVSKEMEHAGIKHNM--KTYSML---INGFLKLKDWANAFAIFEDLI 548
Query: 136 LKVLETPLVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVL 195
++ +VL N++ F G +D +A+C+ VKE+ +K++
Sbjct: 549 KDGIKPDVVLYNNIITAF--CGMGKMD---RAVCT-------------VKEM-QKQRHKP 589
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
T +I F++ G+ K A +VF+ GC+ TY I L ++ + A +
Sbjct: 590 TTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQIL 649
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
++M G P+ I+ + G +A +T R++ +
Sbjct: 650 DEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGL----------------- 692
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
LD ++ EA ++++ C+ + A + +M ++ P +
Sbjct: 693 ---------QLDVYTYEA----------LLKACCKSGRMQSALAVTKEMSAQNIPRNTFI 733
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N +I +++ GD+ A ++++ M+ G++PD++TYT ++ + G M+ A + + E K
Sbjct: 734 YNILIDGWARRGDIWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMK 793
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
+ + TY TLI G+ + + AL EMK G++P+ Y+ L+ SL +A
Sbjct: 794 SVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLMTSLLSRA 850
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 83/157 (52%)
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
+K + K + ++ R D+H A+ KM + G P + V+ ++I AY+ DM A+
Sbjct: 307 KKPSRKEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEAL 366
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
++ M+ G++ + TY+ L+SG+A G E A EAK+ HS L+ + Y +I Y
Sbjct: 367 SCVRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAY 426
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
C+ D A L+ EM++ G+ +D Y+ ++ +
Sbjct: 427 CQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTM 463
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 156/335 (46%), Gaps = 4/335 (1%)
Query: 190 KEKGV-LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
KE+G+ +++ + L++ F+K G ++A F + + N Y I A +R
Sbjct: 373 KEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNM 432
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
D A ++ +M E G + ++ + G + +V+ +E + P L
Sbjct: 433 DKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCL 492
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
I+ + + K AL++ + K+ +K +S +I ++KD A + +I +G
Sbjct: 493 INLYAKLGKVSK-ALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDG 551
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P ++N++I+A+ G M A+ +K M+ + KP T+ ++ G+A G+M++A
Sbjct: 552 IKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKAL 611
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
++ + + + + TY+ LI G + + + A ++L+EM GV PN Y ++
Sbjct: 612 DVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGY 671
Query: 489 CLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRA 522
D A +R +GL L+ T AL++A
Sbjct: 672 ASLG-DTGKAFTYFTKLRDEGLQLDVYTYEALLKA 705
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P + +++ Y++ GDM A E + MR+RG++P + YT L+ YA G MEEA
Sbjct: 309 PSRKEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSC 368
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
+ + K+ +S VTY L+ G+ K + A E K+ N Y +I + C
Sbjct: 369 VRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQ 428
Query: 491 KALDWRTAEKLLEDMRLKGL 510
+ + AE L+ +M +G+
Sbjct: 429 RC-NMDKAEALVREMEEEGI 447
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 136/274 (49%), Gaps = 16/274 (5%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
II C+ GK KEAH + + P + +I C E +K AL ++DD +
Sbjct: 264 IIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGE-LKKALKLMDDMQIK 322
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
K ++S+I LC++ A+ +L +M+S+ P N V+ ++I + K G + A
Sbjct: 323 GLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTA 382
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
+ M S+ + PD TYT L+ G+ GG++ E + +E + VTY TLI
Sbjct: 383 NKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDV 442
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
YCK E A L NEM +G+ PN+ Y LI LC K + TA +LL++MR KGL L
Sbjct: 443 YCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLC-KHGELDTANELLDEMRKKGLQL 501
Query: 513 ---------NGITRA-----LIRAVKELEEDAIE 532
NGI +A I+ +KE+E I+
Sbjct: 502 NVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGID 535
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 149/351 (42%), Gaps = 37/351 (10%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+ LI F KLG + A + F++ + TY I+ + ++ +M
Sbjct: 365 VYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEM 424
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
I G PD +I +CK G+ A ++ + M P LI LC+ E
Sbjct: 425 ISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGE- 483
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+ A ++LD+ + + + ++S++ +C+ ++ A L+ +M G P + +
Sbjct: 484 LDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTT 543
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL------- 431
VI AY + GD+ A ++L+ M RGL+P V T+ LM+G+ G +E+ +L
Sbjct: 544 VIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKG 603
Query: 432 ---------------------NEAKKNHSRL-------SPVTYHTLIRGYCKLEEFDCAL 463
N K + R+ TY+ LI+G+CK A
Sbjct: 604 IVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAW 663
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG 514
L EM + G P V YN LI+ K + A +L E+MR GL +G
Sbjct: 664 FLYKEMIEKGYVPTVTSYNALIKRF-YKKRKFXEARELFEEMRGHGLVADG 713
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 148/315 (46%), Gaps = 12/315 (3%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSR-RKIFDWAWSVCEKMIETGSLP 265
+ LG+ K A ++ + G N+ TY I L + K F+ A V +M+ +P
Sbjct: 303 YCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFE-AEKVLREMMSQKIIP 361
Query: 266 DSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDM 325
D+ +I F K G + A+ + KK+ P LI Q + ++
Sbjct: 362 DNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEP---- 417
Query: 326 LDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
+ E +KP ++++I C+ ++ A +L ++M+ G P + ++I
Sbjct: 418 -QNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALID 476
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
K G++ A E+L MR +GL+ +V Y +++G G +E+A +++ E +
Sbjct: 477 GLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDP 536
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+TY T+I YC+L + D A KLL EM D G+QP V +N L+ C+ + ++L
Sbjct: 537 DAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGM-LEDGDRL 595
Query: 502 LEDMRLKGLHLNGIT 516
L M KG+ + IT
Sbjct: 596 LGWMLEKGIVPDAIT 610
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 142/310 (45%), Gaps = 2/310 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I L K+GK A +V + + + Y I + A ++M+
Sbjct: 332 NSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLS 391
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
PD +I F +GGK E ++ + + P + LI C+ E V
Sbjct: 392 KKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVN 451
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A + ++ I + ++I LC+ ++ A LL +M +G ++NS++
Sbjct: 452 -AFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMV 510
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ KAG++ A++++K M G+ PD TYT ++ Y G +++A ++L E +
Sbjct: 511 NGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQ 570
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+ VT++ L+ G+C L + +LL M + G+ P+ YN L++ C++ T K
Sbjct: 571 PTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRN-SMNTTTK 629
Query: 501 LLEDMRLKGL 510
+ + MR +G+
Sbjct: 630 IYKRMRNQGV 639
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 125/286 (43%), Gaps = 7/286 (2%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI ++ K G+ AF + N+ G N TY I+ L + D A + ++M + G
Sbjct: 439 LIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKG 498
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETV 319
+ +++ CK G ++A + + P +I + C+ D+
Sbjct: 499 LQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAH 558
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
KL +MLD + + F+ ++ C + + LL M+ +G P +N++
Sbjct: 559 KLLQEMLD----RGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTL 614
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+ + M ++ K MR++G+ PD TY L+ G+ ++EA + E +
Sbjct: 615 MKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGY 674
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
+ +Y+ LI+ + K +F A +L EM+ G+ + + YN +
Sbjct: 675 VPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFV 720
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 59/139 (42%), Gaps = 2/139 (1%)
Query: 191 EKGVLTVEI-LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
EKG++ I N L+ +++ + + G + TY I+ + +
Sbjct: 601 EKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLK 660
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
AW + ++MIE G +P +I F K K EA ++ R + + F +
Sbjct: 661 EAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFV 720
Query: 310 SSLCQEDETVKLALDMLDD 328
+C E+ V++ L++ D+
Sbjct: 721 -DMCYEEGDVEITLNLCDE 738
Score = 38.5 bits (88), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Query: 158 SGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAF 217
S + L+K C + KE W + KE+ EK V TV N LI F K K A
Sbjct: 643 SNTYNILIKGHCKARNLKEA---WFLYKEMIEKGY-VPTVTSYNALIKRFYKKRKFXEAR 698
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
E+F + +G VA+ E Y F ++ + ++C++ IE
Sbjct: 699 ELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIE 741
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 155/303 (51%), Gaps = 6/303 (1%)
Query: 226 YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKE 285
+G N TY + AL R + A V M G P++ +++ FC+ G+
Sbjct: 146 HGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDG 205
Query: 286 AHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
A V +L RE+ P ++V F +++ LC+ ++ A + D+ E + +++
Sbjct: 206 AERVVSLMREEGNAKP-NLVTFNSMVNGLCKAGR-MEGARKVFDEMVREGLAPDVVSYNT 263
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
++ C++ +H + + S+M G P F S+I A KAG++ A+ ++ MR RG
Sbjct: 264 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 323
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
L+ + T+T L+ G+ G +++A + E +K + S V Y+ LI GYCKL D A
Sbjct: 324 LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAR 383
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRA 522
+L+ EM+ V+P+V Y+ +I C K + +A +L + M KG+ + IT +LIR
Sbjct: 384 ELIREMEAKRVKPDVVTYSTIISGYC-KVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 442
Query: 523 VKE 525
+ E
Sbjct: 443 LCE 445
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 167/360 (46%), Gaps = 7/360 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L++A+C+ +E + ++ G V N L+A F + G+ A V +
Sbjct: 156 NILVRALCARGRLEEAVGVVGDMRGAGCAPNAV----TYNTLVAAFCRAGELDGAERVVS 211
Query: 222 KFGDYGCV-ANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ G N T+ + L + + A V ++M+ G PD ++S +CK
Sbjct: 212 LMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKV 271
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
G E+ V++ ++ + P LI + C+ ++ A+ ++ +
Sbjct: 272 GCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAG-NLEQAVALVAQMRERGLRMNEVT 330
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F+++I C+ + A + +M G P +N++I+ Y K G M A E+++ M
Sbjct: 331 FTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREME 390
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
++ +KPDV TY+ ++SGY G ++ A ++ + K +TY +LIRG C+ + +
Sbjct: 391 AKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLN 450
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
A +L M +GVQP+ Y LI C K + A L ++M KG+ + +T +++
Sbjct: 451 DACELFENMLQLGVQPDEFTYTTLIDGHC-KEGNVEKALSLHDEMIRKGVLPDVVTYSVL 509
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 160/348 (45%), Gaps = 19/348 (5%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ A C + + +++E G + ++T N ++ K G+ + A +VF+
Sbjct: 191 NTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVT---FNSMVNGLCKAGRMEGARKVFD 247
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ G + +Y + + + +V +M + G +PD +I CK G
Sbjct: 248 EMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAG 307
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDF---SGEARKYAI 338
++A + RE+ + + LI C++ LDD E RK I
Sbjct: 308 NLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKG--------FLDDALLAVEEMRKCGI 359
Query: 339 KP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
+P ++++I C++ + A+ L+ +M ++ P ++++IS Y K G++ A +
Sbjct: 360 QPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ 419
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+ + M +G+ PD TY+ L+ G ++ +ACE+ + + TY TLI G+C
Sbjct: 420 LNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHC 479
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
K + AL L +EM GV P+V Y+ LI L K+ + A +LL
Sbjct: 480 KEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLS-KSARTKEAHRLL 526
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 111/219 (50%), Gaps = 3/219 (1%)
Query: 299 YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
Y P SV A+ L D ++ A L + ++ ++R+LC + A
Sbjct: 114 YAP-SVPAYNAVLLALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAV 172
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG-LKPDVYTYTGLMSG 417
++ M G P +N++++A+ +AG++ A ++ LMR G KP++ T+ +++G
Sbjct: 173 GVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNG 232
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
G+ME A ++ +E + V+Y+TL+ GYCK+ +L + +EM G+ P+
Sbjct: 233 LCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPD 292
Query: 478 VDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
V + LI + C KA + A L+ MR +GL +N +T
Sbjct: 293 VVTFTSLIHATC-KAGNLEQAVALVAQMRERGLRMNEVT 330
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 143/310 (46%), Gaps = 3/310 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L++ + K+G + VF++ G V + T+ I A + + A ++ +M E
Sbjct: 262 NTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRE 321
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G + +I FCK G +A + R+ + P LI+ C+ +
Sbjct: 322 RGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR-MD 380
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
LA +++ + + K + +S++I C++ ++ A L KM+ +G P ++S+I
Sbjct: 381 LARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLI 440
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ + A E+ + M G++PD +TYT L+ G+ G +E+A + +E +
Sbjct: 441 RGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVL 500
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
VTY LI G K A +LL ++ P+ +Y+ L+ LC ++++
Sbjct: 501 PDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM--LCCSKAEFKSVVA 558
Query: 501 LLEDMRLKGL 510
LL+ +KGL
Sbjct: 559 LLKGFCMKGL 568
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 3/171 (1%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F ++IRS + A L+ S G P +N+V+ A S A + A L M
Sbjct: 86 FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALSDA-SLPSARRFLSSML 144
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G+ P+VYTY L+ G++EEA ++ + + + VTY+TL+ +C+ E D
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 204
Query: 461 CALKLLNEMKDVG-VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
A ++++ M++ G +PN+ +N ++ LC KA A K+ ++M +GL
Sbjct: 205 GAERVVSLMREEGNAKPNLVTFNSMVNGLC-KAGRMEGARKVFDEMVREGL 254
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 128/346 (36%), Gaps = 59/346 (17%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V LI K G + A + + + G N+ T+ I+ ++ D A E
Sbjct: 293 VVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVE 352
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M + G P +I+ +CK G+ A + K++ P + +IS C+
Sbjct: 353 EMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVG 412
Query: 317 ETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
LD + + K + P +SS+IR LC K ++ A L M+ G P
Sbjct: 413 N-----LDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPD 467
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL- 431
+ ++I + K G++ A+ + M +G+ PDV TY+ L++G + + +EA +L
Sbjct: 468 EFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLF 527
Query: 432 ------------------------------------------NEAKKNHS-------RLS 442
EA K + +L
Sbjct: 528 KLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLD 587
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
Y LI G+C+ AL +M G PN L++ L
Sbjct: 588 GSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGL 633
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 136/274 (49%), Gaps = 16/274 (5%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
II C+ GK KEAH + + P + +I C E +K AL ++DD +
Sbjct: 264 IIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGE-LKKALKLMDDMQIK 322
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
K ++S+I LC++ A+ +L +M+S+ P N V+ ++I + K G + A
Sbjct: 323 GLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTA 382
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
+ M S+ + PD TYT L+ G+ GG++ E + +E + VTY TLI
Sbjct: 383 NKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDV 442
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
YCK E A L NEM +G+ PN+ Y LI LC K + TA +LL++MR KGL L
Sbjct: 443 YCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLC-KHGELDTANELLDEMRKKGLQL 501
Query: 513 ---------NGITRA-----LIRAVKELEEDAIE 532
NGI +A I+ +KE+E I+
Sbjct: 502 NVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGID 535
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 148/315 (46%), Gaps = 12/315 (3%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSR-RKIFDWAWSVCEKMIETGSLP 265
+ LG+ K A ++ + G N+ TY I L + K F+ A V +M+ +P
Sbjct: 303 YCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFE-AEKVLREMMSQKIIP 361
Query: 266 DSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDM 325
D+ +I F K G + A+ + KK+ P LI Q + ++
Sbjct: 362 DNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEP---- 417
Query: 326 LDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
+ E +KP ++++I C+ ++ A +L ++M+ G P + ++I
Sbjct: 418 -QNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALID 476
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
K G++ A E+L MR +GL+ +V Y +++G G +E+A +++ E +
Sbjct: 477 GLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDP 536
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+TY T+I YC+L + D A KLL EM D G+QP V +N L+ C+ + ++L
Sbjct: 537 DAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGM-LEDGDRL 595
Query: 502 LEDMRLKGLHLNGIT 516
L M KG+ + IT
Sbjct: 596 LGWMLEKGIVPDAIT 610
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 142/310 (45%), Gaps = 2/310 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I L K+GK A +V + + + Y I + A ++M+
Sbjct: 332 NSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLS 391
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
PD +I F +GGK E ++ + + P + LI C+ E V
Sbjct: 392 KKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVN 451
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A + ++ I + ++I LC+ ++ A LL +M +G ++NS++
Sbjct: 452 -AFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMV 510
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ KAG++ A++++K M G+ PD TYT ++ Y G +++A ++L E +
Sbjct: 511 NGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQ 570
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+ VT++ L+ G+C L + +LL M + G+ P+ YN L++ C++ T K
Sbjct: 571 PTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRN-SMNTTTK 629
Query: 501 LLEDMRLKGL 510
+ + MR +G+
Sbjct: 630 IYKRMRNQGV 639
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 148/351 (42%), Gaps = 37/351 (10%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+ LI F KLG + A + F++ + TY I+ + ++ +M
Sbjct: 365 VYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEM 424
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
I G PD +I +CK G+ A ++ + M P LI LC+ E
Sbjct: 425 ISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGE- 483
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+ A ++LD+ + + + ++S++ +C+ ++ A L+ +M G P + +
Sbjct: 484 LDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTT 543
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL------- 431
VI AY + GD+ A ++L+ M RGL+P V T+ LM+G+ G +E+ +L
Sbjct: 544 VIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKG 603
Query: 432 ---------------------NEAKKNHSRL-------SPVTYHTLIRGYCKLEEFDCAL 463
N K + R+ TY+ LI+G+CK A
Sbjct: 604 IVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAW 663
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG 514
L EM + G P V YN LI+ K A +L E+MR GL +G
Sbjct: 664 FLYKEMIEKGYVPTVTSYNALIKRF-YKKKKILEARELFEEMRGHGLVADG 713
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 125/286 (43%), Gaps = 7/286 (2%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI ++ K G+ AF + N+ G N TY I+ L + D A + ++M + G
Sbjct: 439 LIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKG 498
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETV 319
+ +++ CK G ++A + + P +I + C+ D+
Sbjct: 499 LQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAH 558
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
KL +MLD + + F+ ++ C + + LL M+ +G P +N++
Sbjct: 559 KLLQEMLD----RGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTL 614
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+ + M ++ K MR++G+ PD TY L+ G+ ++EA + E +
Sbjct: 615 MKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGY 674
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
+ +Y+ LI+ + K ++ A +L EM+ G+ + + YN +
Sbjct: 675 VPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFV 720
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 59/139 (42%), Gaps = 2/139 (1%)
Query: 191 EKGVLTVEI-LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
EKG++ I N L+ +++ + + G + TY I+ + +
Sbjct: 601 EKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLK 660
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
AW + ++MIE G +P +I F K K EA ++ R + + F +
Sbjct: 661 EAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFV 720
Query: 310 SSLCQEDETVKLALDMLDD 328
+C E+ V++ L++ D+
Sbjct: 721 -DMCYEEGDVEITLNLCDE 738
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 157/328 (47%), Gaps = 11/328 (3%)
Query: 194 VLTVEILNELIALFSK-LGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAW 252
VL+V+ N + SK K A VF +F + G N +Y I + + A
Sbjct: 207 VLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAH 266
Query: 253 SVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSL 312
+ M G PD +++ +C+ G+ + + + + K + P + +I L
Sbjct: 267 HLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLL 326
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEG 368
C+ KLA + + FS R+ I P ++++I C+ D+ A +M S
Sbjct: 327 CR---ICKLA-EAEEAFSEMIRQ-GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD 381
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P + ++IS + + GDM A ++ M +GL+PD T+T L++GY G M++A
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ N + + VTY TLI G CK + D A +LL+EM +G+QPN+ YN ++ L
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 501
Query: 489 CLKALDWRTAEKLLEDMRLKGLHLNGIT 516
C K+ + A KL+ + GL+ + +T
Sbjct: 502 C-KSGNIEEAVKLVGEFEAAGLNADTVT 528
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 121/260 (46%), Gaps = 2/260 (0%)
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+MI G LPD+ +I FCK G + A + + + P +IS CQ
Sbjct: 341 EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ V+ + F ++ F+ +I C+ + A + + MI G P +
Sbjct: 401 DMVEAGKLFHEMFCKGLEPDSV-TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
++I K GD+ A E+L M GL+P+++TY +++G G +EEA +++ E +
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
VTY TL+ YCK E D A ++L EM G+QP + +N L+ CL +
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM-LE 578
Query: 497 TAEKLLEDMRLKGLHLNGIT 516
EKLL M KG+ N T
Sbjct: 579 DGEKLLNWMLAKGIAPNATT 598
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 155/341 (45%), Gaps = 6/341 (1%)
Query: 176 EVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETY 235
+V+ L +++K G K I +I L ++ K A E F++ G + + Y
Sbjct: 299 KVWKLIEVMKRKGLKPNSY----IYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVY 354
Query: 236 YFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE 295
I+ +R A +M PD IIS FC+ G EA ++
Sbjct: 355 TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 414
Query: 296 KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVH 355
K + P LI+ C+ +K A + + + ++++I LC+ D+
Sbjct: 415 KGLEPDSVTFTELINGYCKAGH-MKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
A LL +M G P +NS+++ K+G++ A++++ + GL D TYT LM
Sbjct: 474 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 533
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
Y G+M++A EIL E + + VT++ L+ G+C + KLLN M G+
Sbjct: 534 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 593
Query: 476 PNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
PN +N L++ C++ + + A + +DM +G+ +G T
Sbjct: 594 PNATTFNSLVKQYCIRN-NLKAATAIYKDMCSRGVGPDGKT 633
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 169/367 (46%), Gaps = 19/367 (5%)
Query: 159 GVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLT-VEILNELIALFSKLGKGKAAF 217
G + LL IC +E ++ +++++ G+L + LI F K G +AA
Sbjct: 320 GSIIGLLCRICKLAEAEEAFS--EMIRQ------GILPDTVVYTTLIDGFCKRGDIRAAS 371
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
+ F + + TY I + A + +M G PDS ++I+ +
Sbjct: 372 KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGY 431
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
CK G K+A V+ + P LI LC+E + LD ++ E K
Sbjct: 432 CKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD-----LDSANELLHEMWKIG 486
Query: 338 IKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
++P ++S++ LC+ ++ A L+ + + G + +++ AY K+G+M A
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
E+LK M +GL+P + T+ LM+G+ G +E+ ++LN + T+++L++ Y
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
C A + +M GV P+ Y L++ C KA + + A L ++M+ KG ++
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC-KARNMKEAWFLFQEMKGKGFSVS 665
Query: 514 GITRALI 520
T +++
Sbjct: 666 VSTYSVL 672
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 125/275 (45%), Gaps = 1/275 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
ELI + K G K AF V N GC N TY I+ L + D A + +M
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G P+ I++ CK G +EA + + L+ + C+ E
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
K A ++L + G+ + I F+ ++ C + + LL+ M+++G P FNS+
Sbjct: 544 K-AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+ Y ++ A + K M SRG+ PD TY L+ G+ M+EA + E K
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV 474
+S TY LI+G+ K ++F A ++ ++M+ G+
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 157/328 (47%), Gaps = 11/328 (3%)
Query: 194 VLTVEILNELIALFSK-LGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAW 252
VL+V+ N + SK K A VF +F + G N +Y I + + A
Sbjct: 650 VLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAH 709
Query: 253 SVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSL 312
+ M G PD +++ +C+ G+ + + + + K + P + +I L
Sbjct: 710 HLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLL 769
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEG 368
C+ KLA + + FS R+ I P ++++I C+ D+ A +M S
Sbjct: 770 CR---ICKLA-EAEEAFSEMIRQ-GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD 824
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P + ++IS + + GDM A ++ M +GL+PD T+T L++GY G M++A
Sbjct: 825 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 884
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ N + + VTY TLI G CK + D A +LL+EM +G+QPN+ YN ++ L
Sbjct: 885 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 944
Query: 489 CLKALDWRTAEKLLEDMRLKGLHLNGIT 516
C K+ + A KL+ + GL+ + +T
Sbjct: 945 C-KSGNIEEAVKLVGEFEAAGLNADTVT 971
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 121/260 (46%), Gaps = 2/260 (0%)
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+MI G LPD+ +I FCK G + A + + + P +IS CQ
Sbjct: 784 EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 843
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ V+ + F ++ F+ +I C+ + A + + MI G P +
Sbjct: 844 DMVEAGKLFHEMFCKGLEPDSVT-FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 902
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
++I K GD+ A E+L M GL+P+++TY +++G G +EEA +++ E +
Sbjct: 903 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 962
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
VTY TL+ YCK E D A ++L EM G+QP + +N L+ CL +
Sbjct: 963 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM-LE 1021
Query: 497 TAEKLLEDMRLKGLHLNGIT 516
EKLL M KG+ N T
Sbjct: 1022 DGEKLLNWMLAKGIAPNATT 1041
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 155/341 (45%), Gaps = 6/341 (1%)
Query: 176 EVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETY 235
+V+ L +++K G K I +I L ++ K A E F++ G + + Y
Sbjct: 742 KVWKLIEVMKRKGLKPNSY----IYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVY 797
Query: 236 YFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE 295
I+ +R A +M PD IIS FC+ G EA ++
Sbjct: 798 TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 857
Query: 296 KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVH 355
K + P LI+ C+ +K A + + + ++++I LC+ D+
Sbjct: 858 KGLEPDSVTFTELINGYCKAGH-MKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 916
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
A LL +M G P +NS+++ K+G++ A++++ + GL D TYT LM
Sbjct: 917 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 976
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
Y G+M++A EIL E + + VT++ L+ G+C + KLLN M G+
Sbjct: 977 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 1036
Query: 476 PNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
PN +N L++ C++ + + A + +DM +G+ +G T
Sbjct: 1037 PNATTFNSLVKQYCIRN-NLKAATAIYKDMCSRGVGPDGKT 1076
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 170/367 (46%), Gaps = 19/367 (5%)
Query: 159 GVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEIL-NELIALFSKLGKGKAAF 217
G + LL IC +E ++ +++++ G+L ++ LI F K G +AA
Sbjct: 763 GSIIGLLCRICKLAEAEEAFS--EMIRQ------GILPDTVVYTTLIDGFCKRGDIRAAS 814
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
+ F + + TY I + A + +M G PDS ++I+ +
Sbjct: 815 KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGY 874
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
CK G K+A V+ + P LI LC+E + LD ++ E K
Sbjct: 875 CKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD-----LDSANELLHEMWKIG 929
Query: 338 IKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
++P ++S++ LC+ ++ A L+ + + G + +++ AY K+G+M A
Sbjct: 930 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 989
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
E+LK M +GL+P + T+ LM+G+ G +E+ ++LN + T+++L++ Y
Sbjct: 990 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 1049
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
C A + +M GV P+ Y L++ C KA + + A L ++M+ KG ++
Sbjct: 1050 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC-KARNMKEAWFLFQEMKGKGFSVS 1108
Query: 514 GITRALI 520
T +++
Sbjct: 1109 VSTYSVL 1115
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 125/275 (45%), Gaps = 1/275 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
ELI + K G K AF V N GC N TY I+ L + D A + +M
Sbjct: 867 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 926
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G P+ I++ CK G +EA + + L+ + C+ E
Sbjct: 927 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 986
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
K A ++L + G+ + I F+ ++ C + + LL+ M+++G P FNS+
Sbjct: 987 K-AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 1045
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+ Y ++ A + K M SRG+ PD TY L+ G+ M+EA + E K
Sbjct: 1046 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 1105
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV 474
+S TY LI+G+ K ++F A ++ ++M+ G+
Sbjct: 1106 SVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 1140
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 160/349 (45%), Gaps = 38/349 (10%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V N LI + + + A + YG V +++T+ ++ D A + E
Sbjct: 189 VSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIRE 248
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEA-HVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+M+E G + V I+ FCK G+ ++A + + ++ + +P Q L++ LC+
Sbjct: 249 QMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKA 308
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
VK A++++D E + ++SVI LC++ +V A L +MI+ P
Sbjct: 309 GH-VKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVT 367
Query: 376 FNSVISAYSKAGDMTPA-----------------------------------MEMLKLMR 400
+N++IS K + A ME+ + MR
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
S+G +PD +TY L+ + G+++EA +L + + + S +TY+TLI G+CK +
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIR 487
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
A ++ +EM+ GV N YN LI LC K+ A +L++ M ++G
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLC-KSRRVEDASQLMDQMIMEG 535
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 149/331 (45%), Gaps = 13/331 (3%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ +C + K + D++ + G V N +I+ KLG+ K A E +
Sbjct: 299 NTLVNGLCKAGHVKHAIEIMDVMLQEGYDPD----VYTYNSVISGLCKLGEVKEAVEFLD 354
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ C N TY I L + + A + + G LPD +I C
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLD--DFSGEARKYAIK 339
+ A ++ R K P + LI SLC + + + AL+ML + SG AR ++
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGK-LDEALNMLKQMELSGCAR--SVI 471
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
++++I C+ + A+ + +M G + +N++I K+ + A +++ M
Sbjct: 472 TYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQM 531
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
G KPD +TY L++ + GG +++A +I+ N VTY TLI G CK
Sbjct: 532 IMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRV 591
Query: 460 DCALKLLN--EMKDVGVQPNVDEYNKLIQSL 488
+ A KLL +MK + + P+ YN +IQ L
Sbjct: 592 EVASKLLRSIQMKGIALTPHA--YNPVIQGL 620
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 148/318 (46%), Gaps = 3/318 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDY-GCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+N ++ F K G+ + A + + G +Q T+ + L + A + + M
Sbjct: 262 VNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVM 321
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
++ G PD +IS CK G+ KEA + P LIS+LC+E++
Sbjct: 322 LQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQ- 380
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
V+ A ++ + + + F+S+I+ LC ++ A L +M S+G P +N
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I + G + A+ MLK M G V TY L+ G+ ++ EA EI +E + +
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHG 500
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
+ VTY+TLI G CK + A +L+++M G +P+ YN L+ C + D + A
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFC-RGGDIKKA 559
Query: 499 EKLLEDMRLKGLHLNGIT 516
+++ M G + +T
Sbjct: 560 ADIVQAMTSNGCEPDIVT 577
>gi|357166784|ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Brachypodium distachyon]
Length = 904
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 143/311 (45%), Gaps = 2/311 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI L+ K+GK A + + YG N +TY I F A+S+ E+M+++G
Sbjct: 450 LINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSG 509
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD +I FCK G A + ++++M P +I + +K A
Sbjct: 510 LQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGD-MKRA 568
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
L++LD + ++++I L + V A ++L+KM G P + ++
Sbjct: 569 LNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRG 628
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y+ GD+ A E ++ GLK DVY Y L+ G+M+ A + E +
Sbjct: 629 YAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARN 688
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
Y+ LI G+ + + A L+ +MK+ GV PN+ Y I + C KA D + A+K++
Sbjct: 689 TFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACC-KAGDMQRAQKVI 747
Query: 503 EDMRLKGLHLN 513
E+M GL N
Sbjct: 748 EEMADVGLKPN 758
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 141/325 (43%), Gaps = 36/325 (11%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI+ F L AF +F + G ++ Y IEA + D A + EKM +
Sbjct: 485 LISGFIHLHDFANAFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKER 544
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P + II F G K A + L R P LI L ++++ V+ A
Sbjct: 545 MQPSNRAFRPIIEGFAVAGDMKRALNILDLMRRSGCAPTVMTYNALIHGLIKKNQ-VERA 603
Query: 323 LDMLDDFS------------------------GEARKYAIKP-----------FSSVIRS 347
+ +L+ S G+A +Y K + +++R+
Sbjct: 604 VSVLNKMSIAGITPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRA 663
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
C+ + A + +M ++ V+N +I +++ GD+ A +++K M+ G+ P+
Sbjct: 664 CCKSGRMQSALAVTREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPN 723
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
++TYT ++ G M+ A +++ E + + TY TLI+G+ K D ALK
Sbjct: 724 IHTYTSYINACCKAGDMQRAQKVIEEMADVGLKPNLKTYTTLIKGWAKASLPDRALKSFE 783
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKA 492
EMK G++P+ Y+ L+ SL +A
Sbjct: 784 EMKLAGLKPDEAAYHCLVTSLLSRA 808
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 138/302 (45%), Gaps = 10/302 (3%)
Query: 190 KEKGV-LTVEILNELIALFSKLGKGKAAFEVFN----KFGDYGCVANQETYYFTIEALSR 244
K +G+ LT+ + +IA F+K+ ++A +F K GD N Y I A +
Sbjct: 331 KAEGIELTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLGDL----NGIIYSNIIHAHCQ 386
Query: 245 RKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSV 304
D A + +M E G + ++ + K+ +V+ +E P
Sbjct: 387 SGNMDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIIS 446
Query: 305 VAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM 364
LI+ + + K A+ + + K+ K +S +I + D A ++ +M
Sbjct: 447 YGCLINLYIKIGKVTK-AIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEM 505
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
+ G P A++N +I A+ K G+M A+ +L+ M+ ++P + ++ G+A G M
Sbjct: 506 LKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDM 565
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
+ A IL+ +++ + +TY+ LI G K + + A+ +LN+M G+ PN Y +
Sbjct: 566 KRALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTII 625
Query: 485 IQ 486
++
Sbjct: 626 MR 627
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 112/262 (42%), Gaps = 1/262 (0%)
Query: 189 EKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
+KE+ + +I F+ G K A + + GC TY I L ++
Sbjct: 541 QKERMQPSNRAFRPIIEGFAVAGDMKRALNILDLMRRSGCAPTVMTYNALIHGLIKKNQV 600
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
+ A SV KM G P+ I+ + G +A +T +E + + L
Sbjct: 601 ERAVSVLNKMSIAGITPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETL 660
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
+ + C+ ++ AL + + S + ++ +I R DV A L+ +M +G
Sbjct: 661 LRACCKSGR-MQSALAVTREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDG 719
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
PP + S I+A KAGDM A ++++ M GLKP++ TYT L+ G+A + A
Sbjct: 720 VPPNIHTYTSYINACCKAGDMQRAQKVIEEMADVGLKPNLKTYTTLIKGWAKASLPDRAL 779
Query: 429 EILNEAKKNHSRLSPVTYHTLI 450
+ E K + YH L+
Sbjct: 780 KSFEEMKLAGLKPDEAAYHCLV 801
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 76/152 (50%)
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
+ F +I + D H A+ M + G P VF S++ AY+ A DM + ++
Sbjct: 270 REFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLSCVEE 329
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M++ G++ + TY+ +++G+A + A + EAK L+ + Y +I +C+
Sbjct: 330 MKAEGIELTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLGDLNGIIYSNIIHAHCQSGN 389
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
D A +L+ EM++ G+ +D Y+ ++ +
Sbjct: 390 MDRAEELVREMEEDGIDAPIDAYHSMMHGYTI 421
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 135/324 (41%), Gaps = 7/324 (2%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I ++K G A F G N + + A + + S E+M G
Sbjct: 275 MIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLSCVEEMKAEG 334
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
II+ F K A+ A ++ A+ K + + +I + CQ + A
Sbjct: 335 IELTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLGDLNGIIYSNIIHAHCQSG-NMDRA 393
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+++ + + I + S++ ++D + ++ P + +I+
Sbjct: 394 EELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINL 453
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y K G +T A+ + K M S G+K + TY+ L+SG+ + A I E K+ +
Sbjct: 454 YIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPD 513
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
Y+ LI +CK+ D A+++L +M+ +QP+ + +I+ + A D + A +L
Sbjct: 514 RAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAV-AGDMKRALNIL 572
Query: 503 EDMRLKG-----LHLNGITRALIR 521
+ MR G + N + LI+
Sbjct: 573 DLMRRSGCAPTVMTYNALIHGLIK 596
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 7/179 (3%)
Query: 332 EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
+ R+ A + F V+ S R +D + ++ P P F +I Y+K GD
Sbjct: 234 QGREEACREFRRVVES--RPEDWQAVVSAFERI----PKPSRREFGLMIVYYAKRGDKHH 287
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
A + MR+RG++P+ + +T L+ YA M + E K L+ VTY +I
Sbjct: 288 ARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLSCVEEMKAEGIELTIVTYSIIIA 347
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
G+ K+ + A L E K N Y+ +I + C ++ + AE+L+ +M G+
Sbjct: 348 GFAKINDAQSADNLFKEAKAKLGDLNGIIYSNIIHAHC-QSGNMDRAEELVREMEEDGI 405
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 1/184 (0%)
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+I + +I ++ V A + +M S G N ++ +IS + D A +
Sbjct: 443 SIISYGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIF 502
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
+ M GL+PD Y L+ + G M+ A IL + +K + S + +I G+
Sbjct: 503 EEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVA 562
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ AL +L+ M+ G P V YN LI L +K A +L M + G+ N T
Sbjct: 563 GDMKRALNILDLMRRSGCAPTVMTYNALIHGL-IKKNQVERAVSVLNKMSIAGITPNEHT 621
Query: 517 RALI 520
+I
Sbjct: 622 YTII 625
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 143/305 (46%), Gaps = 2/305 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I SK G+ A + N+ D GC+ + T+ I ALS + + A + ++
Sbjct: 341 NTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTV 400
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD +I+ CK G ++ + P + LI LC + +
Sbjct: 401 KGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGK-LG 459
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
ALD+L++ + ++++I +LC+ + A+ + +M ++G FN++I
Sbjct: 460 NALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLI 519
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
KA + A E+++ M GL+P+ TY +++ Y G +++A +IL N
Sbjct: 520 DGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFE 579
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+ VTY TLI G CK ALKLL M+ G++P YN +IQSL + + R A
Sbjct: 580 IDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSL-FRRNNLRDALN 638
Query: 501 LLEDM 505
L +M
Sbjct: 639 LFREM 643
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 144/320 (45%), Gaps = 2/320 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V LN LI + + + A + + +G ++ T+ ++ + A V
Sbjct: 197 VVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKA 256
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
KM+E G P V +I+ +CK G+ ++A P Q + LCQ
Sbjct: 257 KMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNG 316
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
V AL ++D E + +++VI L + ++ AK ++++M+ G P F
Sbjct: 317 H-VSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTF 375
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N++I A S + A+++ + + +GL PDVYT+ L++ G + E K
Sbjct: 376 NTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKS 435
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ VTY+ LI C + + AL LLNEM+ G + YN +I +LC K +
Sbjct: 436 SGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALC-KKMRIE 494
Query: 497 TAEKLLEDMRLKGLHLNGIT 516
AE++ + M +G+ + +T
Sbjct: 495 EAEEVFDQMDAQGISRSAVT 514
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 87/178 (48%), Gaps = 9/178 (5%)
Query: 316 DETVKLALDMLDD--FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
D+ V L L+ LD+ F +A F+ ++ L + +++ ++M G P
Sbjct: 141 DDAVDLVLNQLDNDTFGVQADTVV---FNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDV 197
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
N++I A +A + A+ ML+ M S G+ PD T+T LM G+ G +E A + +
Sbjct: 198 VTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRV--K 255
Query: 434 AKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
AK + SP VT + LI GYCK+ + AL + + G +P+ YN + LC
Sbjct: 256 AKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLC 313
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 83/174 (47%)
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
E +KL + ++ +G + + +++I++LCR V A +L +M S G P
Sbjct: 174 EGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDET 233
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
F +++ + + G + A+ + M G P T L++GY G++E+A + +
Sbjct: 234 TFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQE 293
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ VTY+T + G C+ ALK+++ M G P+V YN +I L
Sbjct: 294 IADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCL 347
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 141/313 (45%), Gaps = 2/313 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+ L+ + F +L + F V K G T+ I L + F A + +
Sbjct: 128 IYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFD 187
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
M+ G PD II+ CK G+ A + E P + LI SLC+ D
Sbjct: 188 DMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCR-D 246
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
V ALD+ + I ++S+I+ LC+ A LL++M S P F
Sbjct: 247 RLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTF 306
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N ++ + K G ++ A+ +LK M G++P+V TY+ LM GY+ + EA ++ +
Sbjct: 307 NVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMIT 366
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ + +Y+ LI GYCK + D A++L NEM G+ PN YN LI C + R
Sbjct: 367 KGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFC-QLGKLR 425
Query: 497 TAEKLLEDMRLKG 509
A+ L +M G
Sbjct: 426 EAQDLFRNMCTNG 438
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 157/339 (46%), Gaps = 5/339 (1%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V N +I K+G+ AA + K + GC N TY I++L R ++ + A +
Sbjct: 198 VYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFS 257
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
M G PD +I CK + KEA + + P L+ + C+E
Sbjct: 258 YMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEG 317
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ V AL +L + + + +SS++ DV A+ L MI++G P +
Sbjct: 318 K-VSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSY 376
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N +I+ Y KA + AM++ M +GL P+ +Y L+ G+ G++ EA ++
Sbjct: 377 NILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCT 436
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
N + TY L+ G+CK A +L M+ ++PN+ Y L+ ++C K+ + +
Sbjct: 437 NGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMC-KSGNHK 495
Query: 497 TAEKLLEDMRLKGL--HLNGITRALIRAVKE-LEEDAIE 532
A KL ++ ++GL H+ T + KE L ++A+E
Sbjct: 496 DARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALE 534
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 133/322 (41%), Gaps = 9/322 (2%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L++ +C KE AL + + + + N L+ F K GK A V
Sbjct: 273 SLIQGLCKFSRWKEASALLNEMTSLNIMPD----IVTFNVLVDTFCKEGKVSEALGVLKT 328
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ G N TY + S A + MI G P+ +I+ +CK +
Sbjct: 329 MTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKR 388
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
EA ++ + + P LI CQ + ++ A D+ + + +S
Sbjct: 389 IDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGK-LREAQDLFRNMCTNGNLPDLFTYS 447
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
++ C+ + A L M S P ++ ++ A K+G+ A ++ + +
Sbjct: 448 ILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQ 507
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
GL+P V YT +++G G ++EA E + + ++Y+ +IRG + ++ A
Sbjct: 508 GLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRA 567
Query: 463 LKLLNEMKDVG----VQPNVDE 480
L L+ EM+D G V+P + E
Sbjct: 568 LLLVGEMRDRGFIADVRPCLSE 589
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 91/187 (48%), Gaps = 5/187 (2%)
Query: 352 KDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA-MEMLKLMRSRGLKPDVYT 410
+++ A + M+ P P F ++SA K G + + K M GL P++YT
Sbjct: 71 RNIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYT 130
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
+ M+ + +++ +L + K + + VT+ TLI G CK+ EF A++L ++M
Sbjct: 131 LSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMV 190
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDA 530
G QP+V YN +I LC K + A LL+ M G N +T + + + L D
Sbjct: 191 AKGCQPDVYTYNTIINGLC-KIGETAAAAGLLKKMEEAGCQPNMVTYSTL--IDSLCRDR 247
Query: 531 IENGEAL 537
+ N EAL
Sbjct: 248 LVN-EAL 253
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 163/353 (46%), Gaps = 6/353 (1%)
Query: 161 VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVF 220
++ L+K +C K+ D V G + V +LN L K+G+ ++A ++
Sbjct: 83 LNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGL----CKIGETRSALKLL 138
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
D N Y I+ L + K+ + A+ + +M G P+ +I FC
Sbjct: 139 RMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLA 198
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
G+ EA + K + P L+ +LC+E + VK A ++L + E K +
Sbjct: 199 GQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGK-VKEAKNLLAVMTKEGVKPNVVS 257
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+++++ C + +V AK + M+ +G P +N +I K+ + AM +L+ +
Sbjct: 258 YNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVL 317
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+ + P+ TY+ L+ G+ G++ A ++L E VTY +L+ CK + D
Sbjct: 318 HKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLD 377
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
A L +MK+ G+QPN Y LI LC K + A+KL + + +KG +N
Sbjct: 378 KATALFMKMKERGIQPNKYTYTALIDGLC-KGGRHKNAQKLFQHLLVKGCRIN 429
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 150/317 (47%), Gaps = 2/317 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N+++ K+ A +F + G + T I ++++V K++
Sbjct: 13 FNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKIL 72
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G P++ + ++ C G+ K++ + + Q A L++ LC+ ET
Sbjct: 73 KLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGET- 131
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
+ AL +L + + + ++++I LC+ K V+ A L S+M + G P ++++
Sbjct: 132 RSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTL 191
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I + AG + A +L M + + P+VYTYT LM G+++EA +L K
Sbjct: 192 IYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGV 251
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
+ + V+Y+TL+ GYC + E A ++ + M GV PNV YN +I LC K+ A
Sbjct: 252 KPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLC-KSKRVDEAM 310
Query: 500 KLLEDMRLKGLHLNGIT 516
LL ++ K + N +T
Sbjct: 311 NLLREVLHKNMVPNTVT 327
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 143/308 (46%), Gaps = 2/308 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F G+ AF + N+ N TY ++AL + A ++ M + G
Sbjct: 191 LIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEG 250
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P+ ++ +C G+ + A ++ +K + P +I LC+ + V A
Sbjct: 251 VKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKS-KRVDEA 309
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+++L + + +SS+I C++ + A LL +M G P + S++ A
Sbjct: 310 MNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDA 369
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
K ++ A + M+ RG++P+ YTYT L+ G GG+ + A ++ R++
Sbjct: 370 LCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRIN 429
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
TY+ +I G CK D AL + ++M++ G P+ + +I+SL K + + AEKLL
Sbjct: 430 VWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDK-AEKLL 488
Query: 503 EDMRLKGL 510
+M K L
Sbjct: 489 HEMIAKDL 496
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 1/179 (0%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
I F+ ++ SL +MK A +L +M +G P N +I+ + G MT + +L
Sbjct: 10 IMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLG 69
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
+ G +P+ T LM G G+++++ ++ ++ V+Y TL+ G CK+
Sbjct: 70 KILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIG 129
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
E ALKLL ++D +PNV YN +I LC L A L +M +G+ N IT
Sbjct: 130 ETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKL-VNEAYDLYSEMDARGIFPNVIT 187
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 142/298 (47%), Gaps = 9/298 (3%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
TV ++ K+GK AA K + C +Y I++L + ++ + A +
Sbjct: 208 TVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLF 267
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
M G P +I C G+ K+A +++ E M P + L+ +LC+E
Sbjct: 268 YHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKE 327
Query: 316 DETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
+ L+ L F G+ + A++P +SS+I +C+ + TLL++M+S P
Sbjct: 328 G----VVLEALSVF-GKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRP 382
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
F+ + + K G ++ A ++ LM RGL+P+V TY LM GY QM+EA ++
Sbjct: 383 DVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVF 442
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ ++Y+ LI+GYCK E D A +L +EM G+ PN + LI LC
Sbjct: 443 DIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLC 500
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 140/320 (43%), Gaps = 11/320 (3%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
++L+ +C+S K+ L+ + E K V+T IL + + K G A VF
Sbjct: 283 NSLIYGMCNSGQWKQASILFKEMLEWNMKPD-VVTFSILVDALC---KEGVVLEALSVFG 338
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
K + TY I + + ++ + ++ +M+ PD + FCK G
Sbjct: 339 KMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKG 398
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLC---QEDETVKLALDMLDDFSGEARKYAI 338
EA + L E+ + P L+ C Q DE K+ D + +
Sbjct: 399 MVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKV----FDIMVNKGCAPDV 454
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
++ +I+ C+ + + AK L +M +G P + ++IS +AG A E+ K
Sbjct: 455 LSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKK 514
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M S G PD+ TY+ L+SG+ G ++EA + KK+ + + V L+ G CK +
Sbjct: 515 MGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGK 574
Query: 459 FDCALKLLNEMKDVGVQPNV 478
+ A +L + + +QP+V
Sbjct: 575 LEDAKELFSSLSIEELQPDV 594
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 139/360 (38%), Gaps = 40/360 (11%)
Query: 194 VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWS 253
V T+ IL + +G G F V K G + T+ I L A
Sbjct: 139 VYTLTILINCLCHLHLVGLG---FSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAME 195
Query: 254 VCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC 313
+ ++ G P I++ CK GK A V E P + +I SLC
Sbjct: 196 QLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLC 255
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
+ + V A+D+ + ++S+I +C A L +M+ P
Sbjct: 256 K-NRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDV 314
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG---------------- 417
F+ ++ A K G + A+ + M ++PD+ TY+ L+ G
Sbjct: 315 VTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNE 374
Query: 418 -------------------YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
+ G + EA I+N + R + VTY++L+ GYC +
Sbjct: 375 MLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQ 434
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRA 518
D A K+ + M + G P+V YN LI+ C K+ A++L ++M KGL N IT
Sbjct: 435 MDEARKVFDIMVNKGCAPDVLSYNILIKGYC-KSERIDEAKQLFDEMSHKGLTPNSITHT 493
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 59/133 (44%)
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A ++M+ P P FN +++A + + + + M G+ VYT T L++
Sbjct: 88 ALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILIN 147
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
+ + +L + K + S +T++TLI G C A++ L+ + G QP
Sbjct: 148 CLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQP 207
Query: 477 NVDEYNKLIQSLC 489
V + ++ LC
Sbjct: 208 TVYTHTMIVNGLC 220
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 160/320 (50%), Gaps = 20/320 (6%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K+G+ +AA ++ + N Y I+++ + K+ + A+ + +M+ G
Sbjct: 196 LIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKG 255
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV--K 320
PD +IS FC GK K+A ++ + + P L+++ C++ + K
Sbjct: 256 ISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGK 315
Query: 321 LALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
DM+ K IKP ++S++ C +K+V+ AK++ + M G P +
Sbjct: 316 TVFDMM-------MKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSY 368
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
+ +I+ + K AM + K M + + PDV TY+ L+ G + G++ A +++++
Sbjct: 369 SIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQM-- 426
Query: 437 NHSRLSP---VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
H R P TY++++ CK + D A+ LL + KD G QP++ Y+ LI+ LC ++
Sbjct: 427 -HDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLC-QSG 484
Query: 494 DWRTAEKLLEDMRLKGLHLN 513
A K+ ED+ +KG +L+
Sbjct: 485 KLEDARKVFEDLLVKGYNLD 504
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 140/272 (51%), Gaps = 2/272 (0%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
I + + +A+SV K+++ G +PD+ + C G+ ++A + +
Sbjct: 127 INCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGF 186
Query: 299 YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
+ Q LI LC+ ET + ALD+L G + + ++++I S+C++K V+ A
Sbjct: 187 HFDQISYGTLIHGLCKVGET-RAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAF 245
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
L S+M+S+G P ++++IS + G + A+++ M +KPDVYT+ L++ +
Sbjct: 246 DLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAF 305
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G+M+E + + K + + VTY++L+ GYC ++E + A + N M GV P++
Sbjct: 306 CKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDI 365
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
Y+ +I C K + A L ++M K +
Sbjct: 366 QSYSIMINGFC-KIKKFDEAMNLFKEMHRKNI 396
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 149/322 (46%), Gaps = 8/322 (2%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI+ F LGK K A ++FNK + T+ + A + +V + M++ G
Sbjct: 266 LISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQG 325
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P+ ++ +C + +A ++ + + P + +I+ C+ +K
Sbjct: 326 IKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCK----IKKF 381
Query: 323 LDMLDDFSGEARKYAIK---PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
+ ++ F RK I +SS+I L + + A L+ +M G PP +NS+
Sbjct: 382 DEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSI 441
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+ A K + A+ +L + +G +PD+ TY+ L+ G G++E+A ++ +
Sbjct: 442 LDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGY 501
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
L Y +I+G+C F+ AL LL++M+D G P+ Y +I SL K + AE
Sbjct: 502 NLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSL-FKKDENDMAE 560
Query: 500 KLLEDMRLKGLHLNGITRALIR 521
KLL +M +GL LN L R
Sbjct: 561 KLLREMIARGLPLNFYDLYLTR 582
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 66/147 (44%)
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
+I C++ + A ++ +K++ G P F ++ G + A + + G
Sbjct: 126 LINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALG 185
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
D +Y L+ G G+ A ++L N + + V Y+T+I CK++ + A
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAF 245
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCL 490
L +EM G+ P+V Y+ LI C+
Sbjct: 246 DLFSEMVSKGISPDVVTYSALISGFCI 272
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 90/230 (39%), Gaps = 39/230 (16%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+SS + DV A +L ++++ P FN ++ + K+ + + + M
Sbjct: 53 YSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKME 112
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL----------- 449
RG+KP++ L++ + G + A + + K +T+ TL
Sbjct: 113 FRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQ 172
Query: 450 ------------------------IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
I G CK+ E AL LL + VQPNV YN +I
Sbjct: 173 QAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTII 232
Query: 486 QSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAVKELE--EDAIE 532
S+C K A L +M KG+ + +T ALI L +DAI+
Sbjct: 233 DSMC-KVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAID 281
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/383 (28%), Positives = 165/383 (43%), Gaps = 20/383 (5%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVL-TVEILNELIALFSKLGKGKAAFE 218
V+D L+ A C SV Y + KGV+ TV ++ + + A
Sbjct: 179 VLDILVSANCPSVAANVFYEML---------SKGVIPTVYTFGVVMKALCMVNEVDNACS 229
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+ +GCV N Y I ALS+R + A + E+M G LPD + +I C
Sbjct: 230 LLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLC 289
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
+ + E + + P L++ LC+ + V A +L+ +
Sbjct: 290 RLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGK-VDEAQVLLNKVPTPNDVH-- 346
Query: 339 KPFSSVIRSLCRMKDVHGAKTLL-SKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
F+ +I + + A L KMI G P FN++I K G M A++M+
Sbjct: 347 --FTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVN 404
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M + G P++ TYT L+ G+ Q+EEA +LNE L+ + Y+ L+R CK
Sbjct: 405 DMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNG 464
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT- 516
+ AL +L EM D G +P++ +N LI LC K A L DM L G+ N +T
Sbjct: 465 KVPKALDMLGEMSDKGCKPDIFTFNTLIFGLC-KVDRKEDALALYRDMLLDGVIANTVTY 523
Query: 517 RALIRAVKELEEDAIENGEALVE 539
LI A L AI+ LV
Sbjct: 524 NTLIHAF--LRGGAIQEALKLVN 544
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 139/298 (46%), Gaps = 2/298 (0%)
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+++K GC + T+ I L ++ + A + M G P+ ++ FC
Sbjct: 367 LYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFC 426
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
K + +EA V K L+ +LC+ + K ALDML + S + K I
Sbjct: 427 KKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPK-ALDMLGEMSDKGCKPDI 485
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
F+++I LC++ A L M+ +G +N++I A+ + G + A++++
Sbjct: 486 FTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVND 545
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M RG D TY GL+ + G E+A + +E + S ++ + LI G C++ +
Sbjct: 546 MLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGK 605
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
AL+LL +M G+ P+V YN LI LC K + R A L ++ +G+ + IT
Sbjct: 606 VCNALELLRDMIHRGLAPDVVTYNSLINGLC-KMGNIREAFNLFNKLQAEGIQPDAIT 662
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 140/336 (41%), Gaps = 39/336 (11%)
Query: 190 KEKGVLTVEILNELIALFSKLGK----GKAAFEVFNKFGDYGCVANQETYYFTIEALSRR 245
KE+G+ E L I + G+ G+A + + G Y C ++Y ++ L
Sbjct: 129 KEEGIAFRESL--FICIMKYYGRANLPGQATRMLLDMKGVYCCEPTFKSYNVVLDILVSA 186
Query: 246 KIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVV 305
A +V +M+ G +P G ++ C + A + + P V
Sbjct: 187 NCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVY 246
Query: 306 AFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI 365
LI +L + D V AL +L++ + F+ VI LCR+ +H L+ +M+
Sbjct: 247 QTLIHALSKRDR-VNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRML 305
Query: 366 SEG-------------------------------PPPGNAVFNSVISAYSKAGDMTPAME 394
G P P + F +I+ Y K+G + A
Sbjct: 306 FRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTILINGYVKSGRLDEANA 365
Query: 395 ML-KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
L M G +PDV+T+ L+ G G M A +++N+ N + +TY TL+ G+
Sbjct: 366 FLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGF 425
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
CK + + A +LNEM G + N+ YN L+++LC
Sbjct: 426 CKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALC 461
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 128/315 (40%), Gaps = 34/315 (10%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V N LI K G +A ++ N GC N TY ++ ++ + A V
Sbjct: 380 VFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLN 439
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M G + ++ CK GK +A + +K P LI LC+ D
Sbjct: 440 EMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVD 499
Query: 317 ---ETVKLALDMLDD----------------FSGEARKYAIK---------------PFS 342
+ + L DML D G A + A+K ++
Sbjct: 500 RKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYN 559
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+I++ C++ A L +M+ + P N N +I+ + G + A+E+L+ M R
Sbjct: 560 GLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHR 619
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
GL PDV TY L++G G + EA + N+ + + +TY+TLI +C+ FD A
Sbjct: 620 GLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDA 679
Query: 463 LKLLNEMKDVGVQPN 477
LL + PN
Sbjct: 680 YLLLLRGVENAFIPN 694
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 112/255 (43%), Gaps = 1/255 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+ K GK A ++ + D GC + T+ I L + + A ++ M+
Sbjct: 454 NVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLL 513
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G + ++ +I F +GG +EA + + + LI + C+ T K
Sbjct: 514 DGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEK 573
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
AL + D+ + + + +I LCR+ V A LL MI G P +NS+I
Sbjct: 574 -ALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLI 632
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ K G++ A + +++ G++PD TY L+ + G ++A +L +N
Sbjct: 633 NGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFI 692
Query: 441 LSPVTYHTLIRGYCK 455
+ VT++ L+ + K
Sbjct: 693 PNDVTWYILVSNFIK 707
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 1/150 (0%)
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P +N V+ A + A + M S+G+ P VYT+ +M +++ AC +
Sbjct: 171 PTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSL 230
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
L + K+ + V Y TLI K + + ALKLL EM +G P+VD +N +I LC
Sbjct: 231 LRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLC- 289
Query: 491 KALDWRTAEKLLEDMRLKGLHLNGITRALI 520
+ KL++ M +G N IT ++
Sbjct: 290 RLNRIHEGAKLVDRMLFRGFTPNDITYGVL 319
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 62/154 (40%), Gaps = 4/154 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+KA C ++ L+D E+ K+ + N LI ++GK A E+
Sbjct: 559 NGLIKAFCKLGATEKALGLFD---EMVRKDLVPSNISC-NLLINGLCRVGKVCNALELLR 614
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G + TY I L + A+++ K+ G PD+ +I W C+ G
Sbjct: 615 DMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAG 674
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+A+++ E P L+S+ +E
Sbjct: 675 MFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKE 708
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 155/356 (43%), Gaps = 45/356 (12%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEK--EKGVLTVEILNELIALFSKLGKGKAAFEVF 220
L+ +CS +E D+++E+ +K E V T I L++L G A E+
Sbjct: 277 TLINGLCSEGRLEEA---MDMLEEMVQKGIEPTVYTYTI--PLVSL-CDAGCSSEAVELL 330
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
K GCV N +T+ I LSR F+ A + KM+ G +P + +I+ C
Sbjct: 331 GKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVE 390
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
G+ + A ++ P + +
Sbjct: 391 GRFETAFTIFKWMLSHGSLP------------------------------------STQT 414
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++ +I+ C M D+ A + KM+ G P +N++I Y K G++ AM +L++M+
Sbjct: 415 YNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMK 474
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
GLKPD +TYT L+SG++ GG++E A + ++ + VTY +I GY L + D
Sbjct: 475 GNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVD 534
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
AL L +M + G P+ YN +I K AE M +GL N IT
Sbjct: 535 DALALFWKMVESGNLPSSQTYNVMISGFS-KTNSISEAENFCGKMVKQGLLPNVIT 589
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 163/370 (44%), Gaps = 41/370 (11%)
Query: 190 KEKG-VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
K++G V ++ LI+ S+ GK + A +++K G V TY I L F
Sbjct: 334 KKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRF 393
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
+ A+++ + M+ GSLP ++ +II FC G ++A V++ + P L
Sbjct: 394 ETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTL 453
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARK-------------------------------YA 337
I C++ + A+ +L+ G K +
Sbjct: 454 IYGYCKQGN-LNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHG 512
Query: 338 IKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
I P ++++I + V A L KM+ G P + +N +IS +SK ++ A
Sbjct: 513 ISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAE 572
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
M +GL P+V TYT + G G+ A +I +E +K + + TY +LI G
Sbjct: 573 NFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGL 632
Query: 454 CKLEEFDCA--LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH 511
C+ + A LL + G +PNVD Y L++ LC + + A++L+ M+ KGL
Sbjct: 633 CQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYE-ADQLVVSMQKKGLQ 691
Query: 512 LN-GITRALI 520
+ I RAL+
Sbjct: 692 PSEEIYRALL 701
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 123/275 (44%), Gaps = 2/275 (0%)
Query: 242 LSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPP 301
L + + D A + KM+ +G P +I+ CK G+ +EA ++ + YP
Sbjct: 177 LGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPN 236
Query: 302 QSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLL 361
LI C+ + + LA M D + +S++I LC + A +L
Sbjct: 237 AFTYTSLILGHCR-NHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDML 295
Query: 362 SKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG 421
+M+ +G P + + + AG + A+E+L M+ RG P++ T+T L+SG +
Sbjct: 296 EEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRD 355
Query: 422 GQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEY 481
G+ E A + ++ + + VTY+ LI C F+ A + M G P+ Y
Sbjct: 356 GKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTY 415
Query: 482 NKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
N++I+ CL D + A + + M G N IT
Sbjct: 416 NEIIKCFCLMG-DIQKAMVIFDKMLKAGSSPNVIT 449
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 150/369 (40%), Gaps = 40/369 (10%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA 216
T+ +AL+ +C + + ++ + G + + + NE+I F +G + A
Sbjct: 376 TTVTYNALINQLCVEGRFETAFTIFKWMLSHGS----LPSTQTYNEIIKCFCLMGDIQKA 431
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
+F+K G N TY I ++ + A + E M G PD+ ++IS
Sbjct: 432 MVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISG 491
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS---SLCQEDETVKLALDMLD------ 327
F +GGK + A ++ E + P +I +L + D+ + L M++
Sbjct: 492 FSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPS 551
Query: 328 ---------------------DFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLS 362
+F G+ K + P ++S I LCR A +
Sbjct: 552 SQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFH 611
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPA--MEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
+M P ++S+I + G A +L + G +P+V TYT L+ G
Sbjct: 612 EMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCG 671
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
G+ EA +++ +K + S Y L+ G CK + + AL + M +G Q ++ +
Sbjct: 672 EGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSD 731
Query: 481 YNKLIQSLC 489
Y LI +LC
Sbjct: 732 YKALICALC 740
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 120/293 (40%), Gaps = 3/293 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I + L K A +F K + G + + +TY I S+ A + C KM++ G
Sbjct: 523 IIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQG 582
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
LP+ I C+ G+ A ++ ++ +P + LI LCQE
Sbjct: 583 LLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAE 642
Query: 323 L-DMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
+ ++L + + + ++++++ LC + A L+ M +G P ++ +++
Sbjct: 643 MYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLI 702
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
K + A+ + M + G + + Y L+ +EEA I + H
Sbjct: 703 GECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNS 762
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
V + L+ G K E D LKLL+ M+ N Y L + L ALD
Sbjct: 763 DEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARE--LSALD 813
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 100/219 (45%), Gaps = 3/219 (1%)
Query: 292 LAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR-KYAIKPFSSVIRSLCR 350
L R++ P V +I S C+ + VK L + + + Y + F++++ L +
Sbjct: 121 LVRDRLFAPADHVRILMIKS-CRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGK 179
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
V A+ + KM++ G P FN++I+ K G + A ++ + P+ +T
Sbjct: 180 FDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFT 239
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
YT L+ G+ ++ A + + K+ + VTY TLI G C + A+ +L EM
Sbjct: 240 YTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMV 299
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
G++P V Y + SLC E LL M+ +G
Sbjct: 300 QKGIEPTVYTYTIPLVSLCDAGCSSEAVE-LLGKMKKRG 337
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 137/293 (46%), Gaps = 1/293 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+ L+ LI F L + AF V K G + T+ I + A + +
Sbjct: 96 IYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFD 155
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
KMI G PD G +I+ CK G A + +K P +I SLC+ D
Sbjct: 156 KMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCK-D 214
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
V A ++ + + I ++S+I +LC + + TLL++M+ P F
Sbjct: 215 RQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSF 274
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N+V+ A K G +T A +++ M RG++P+V TYT LM G+ +M+EA ++ +
Sbjct: 275 NTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVC 334
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ ++Y+TLI GYCK++ D A+ L EM + P+ Y+ LI LC
Sbjct: 335 KGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLC 387
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 159/358 (44%), Gaps = 11/358 (3%)
Query: 152 FFKWVTSGV------VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIA 205
F + VT G+ ++L+ A+C+ K V L + + + K + V N ++
Sbjct: 224 FSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVD----SKIMPDVVSFNTVVD 279
Query: 206 LFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLP 265
K GK A +V +K G N TY ++ D A V + M+ G +P
Sbjct: 280 ALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMP 339
Query: 266 DSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDM 325
+ +I+ +CK + +A ++ +++ P + LI LC E ++ A+ +
Sbjct: 340 NVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHV-ERLQDAIAL 398
Query: 326 LDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSK 385
+ ++ + + ++ LC+ + + A LL + P V N I +
Sbjct: 399 FHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCR 458
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
AG++ A ++ + S+GL+PDV+TY+ +++G G ++EA ++ E +N L+
Sbjct: 459 AGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCI 518
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
Y+T+ RG+ + E A++LL EM G + ++ L LD + L E
Sbjct: 519 YNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILRE 576
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 130/317 (41%), Gaps = 37/317 (11%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N+L+ +K+ + ++ +G N T + I + +A+SV K++
Sbjct: 64 FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKIL 123
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G PD+ +I GK EA
Sbjct: 124 KLGHQPDTATFTTLIRGIYVEGKIGEA--------------------------------- 150
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
L + D GE + + + ++I LC++ + A LL M+ + P +N++
Sbjct: 151 ---LHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTI 207
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I + K +T A + M ++G+ PD++TY L+ N + + +LNE +
Sbjct: 208 IDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKI 267
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
V+++T++ CK + A ++++M GV+PNV Y L+ CL + + A
Sbjct: 268 MPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLS-EMDEAV 326
Query: 500 KLLEDMRLKGLHLNGIT 516
K+ + M KG N I+
Sbjct: 327 KVFDTMVCKGCMPNVIS 343
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 91/189 (48%), Gaps = 2/189 (1%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F+ ++ S+ +MK +L +M S G PP + +I+++ + A +L +
Sbjct: 64 FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKIL 123
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G +PD T+T L+ G G++ EA + ++ R VTY TLI G CK+
Sbjct: 124 KLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTS 183
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RAL 519
A++LL M QPNV YN +I SLC K A L +M KG+ + T +L
Sbjct: 184 AAIRLLGSMVQKNCQPNVFAYNTIIDSLC-KDRQVTEAFNLFSEMVTKGISPDIFTYNSL 242
Query: 520 IRAVKELEE 528
I A+ L E
Sbjct: 243 IHALCNLCE 251
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 155/356 (43%), Gaps = 45/356 (12%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEK--EKGVLTVEILNELIALFSKLGKGKAAFEVF 220
L+ +CS +E D+++E+ +K E V T I L++L G A E+
Sbjct: 277 TLINGLCSEGRLEEA---MDMLEEMVQKGIEPTVYTYTI--PLVSL-CDAGCSSEAVELL 330
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
K GCV N +T+ I LSR F+ A + KM+ G +P + +I+ C
Sbjct: 331 GKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVE 390
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
G+ + A ++ P + +
Sbjct: 391 GRFETAFTIFKWMLSHGSLP------------------------------------STQT 414
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++ +I+ C M D+ A + KM+ G P +N++I Y K G++ AM +L++M+
Sbjct: 415 YNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMK 474
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
GLKPD +TYT L+SG++ GG++E A + ++ + VTY +I GY L + D
Sbjct: 475 GNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVD 534
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
AL L +M + G P+ YN +I K AE M +GL N IT
Sbjct: 535 DALALFWKMVESGNLPSSQTYNVMISGFS-KTNSISEAENFCGKMVKQGLLPNVIT 589
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 163/370 (44%), Gaps = 41/370 (11%)
Query: 190 KEKG-VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
K++G V ++ LI+ S+ GK + A +++K G V TY I L F
Sbjct: 334 KKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRF 393
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
+ A+++ + M+ GSLP ++ +II FC G ++A V++ + P L
Sbjct: 394 ETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTL 453
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARK-------------------------------YA 337
I C++ + A+ +L+ G K +
Sbjct: 454 IYGYCKQGN-LNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHG 512
Query: 338 IKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
I P ++++I + V A L KM+ G P + +N +IS +SK ++ A
Sbjct: 513 ISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAE 572
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
M +GL P+V TYT + G G+ A +I +E +K + + TY +LI G
Sbjct: 573 NFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGL 632
Query: 454 CKLEEFDCA--LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH 511
C+ + A LL + G +PNVD Y L++ LC + + A++L+ M+ KGL
Sbjct: 633 CQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYE-ADQLVVSMQKKGLQ 691
Query: 512 LN-GITRALI 520
+ I RAL+
Sbjct: 692 PSEEIYRALL 701
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 123/275 (44%), Gaps = 2/275 (0%)
Query: 242 LSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPP 301
L + + D A + KM+ +G P +I+ CK G+ +EA ++ + YP
Sbjct: 177 LGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPN 236
Query: 302 QSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLL 361
LI C+ + + LA M D + +S++I LC + A +L
Sbjct: 237 AFTYTSLILGHCR-NHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDML 295
Query: 362 SKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG 421
+M+ +G P + + + AG + A+E+L M+ RG P++ T+T L+SG +
Sbjct: 296 EEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRD 355
Query: 422 GQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEY 481
G+ E A + ++ + + VTY+ LI C F+ A + M G P+ Y
Sbjct: 356 GKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTY 415
Query: 482 NKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
N++I+ CL D + A + + M G N IT
Sbjct: 416 NEIIKCFCLMG-DIQKAMVIFDKMLKAGSSPNVIT 449
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 150/369 (40%), Gaps = 40/369 (10%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA 216
T+ +AL+ +C + + ++ + G + + + NE+I F +G + A
Sbjct: 376 TTVTYNALINQLCVEGRFETAFTIFKWMLSHGS----LPSTQTYNEIIKCFCLMGDIQKA 431
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
+F+K G N TY I ++ + A + E M G PD+ ++IS
Sbjct: 432 MVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISG 491
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS---SLCQEDETVKLALDMLD------ 327
F +GGK + A ++ E + P +I +L + D+ + L M++
Sbjct: 492 FSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPS 551
Query: 328 ---------------------DFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLS 362
+F G+ K + P ++S I LCR A +
Sbjct: 552 SQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFH 611
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPA--MEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
+M P ++S+I + G A +L + G +P+V TYT L+ G
Sbjct: 612 EMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCG 671
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
G+ EA +++ +K + S Y L+ G CK + + AL + M +G Q ++ +
Sbjct: 672 EGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSD 731
Query: 481 YNKLIQSLC 489
Y LI +LC
Sbjct: 732 YKALICALC 740
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 100/219 (45%), Gaps = 3/219 (1%)
Query: 292 LAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR-KYAIKPFSSVIRSLCR 350
L R++ P V +I S C+ + VK L + + + Y + F++++ L +
Sbjct: 121 LVRDRLFAPADHVRILMIKS-CRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGK 179
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
V A+ + KM++ G P FN++I+ K G + A ++ + P+ +T
Sbjct: 180 FDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFT 239
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
YT L+ G+ ++ A + + K+ + VTY TLI G C + A+ +L EM
Sbjct: 240 YTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMV 299
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
G++P V Y + SLC E LL M+ +G
Sbjct: 300 QKGIEPTVYTYTIPLVSLCDAGCSSEAVE-LLGKMKKRG 337
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 120/293 (40%), Gaps = 3/293 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I + L K A +F K + G + + +TY I S+ A + C KM++ G
Sbjct: 523 IIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQG 582
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
LP+ I C+ G+ A ++ ++ +P + LI LCQE
Sbjct: 583 LLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAE 642
Query: 323 L-DMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
+ ++L + + + ++++++ LC + A L+ M +G P ++ +++
Sbjct: 643 MYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLI 702
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
K + A+ + M + G + + Y L+ +EEA I + H
Sbjct: 703 GECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNS 762
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
V + L+ G K E D LKLL+ M+ N Y L + L ALD
Sbjct: 763 DEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARE--LSALD 813
>gi|449530367|ref|XP_004172167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like, partial [Cucumis sativus]
Length = 564
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 156/348 (44%), Gaps = 14/348 (4%)
Query: 178 YALWDIVKEIGEKEKGVLTVEILNE------------LIALFSKLGKGKAAFEVFNKFGD 225
+ + D +G+++K +L E E LI L++KLGK A EV +
Sbjct: 57 HTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEH 116
Query: 226 YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKE 285
G N +TY I + K + A+++ E +I+ G PD II+ FC GK
Sbjct: 117 AGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDR 176
Query: 286 AHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVI 345
A ++++ P +I ++ E +K ALD+ D + ++++I
Sbjct: 177 AVCTVKEMQKQRHKPTTRTFMPIIHGFARKGE-MKKALDVFDMMRMSGCIPTVHTYNALI 235
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
L + + A+ +L +M G P + +++ Y+ GD A +R GL+
Sbjct: 236 LGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQ 295
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
DVYTY L+ G+M+ A + E + + Y+ LI G+ + + A L
Sbjct: 296 LDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADL 355
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
+ +MK GVQP++ Y I + C KA D + A K +E+M+ G+ N
Sbjct: 356 MQQMKREGVQPDIHTYTSFINA-CSKAGDMQRATKTIEEMKSVGVKPN 402
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 186/417 (44%), Gaps = 61/417 (14%)
Query: 77 NEYAQMDPSADAVE-SKEEEAYEIDGDKLENVLSLLQSSVDGYLESSLDSFELDLHEDFV 135
N YA++ + A+E SKE E I + S+L ++G+L+ + + ED +
Sbjct: 96 NLYAKLGKVSKALEVSKEMEHAGIKHNM--KTYSML---INGFLKLKDWANAFAIFEDLI 150
Query: 136 LKVLETPLVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVL 195
++ +VL N++ F G +D +A+C+ VKE+ +K++
Sbjct: 151 KDGIKPDVVLYNNIITAF--CGMGKMD---RAVCT-------------VKEM-QKQRHKP 191
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
T +I F++ G+ K A +VF+ GC+ TY I L ++ + A +
Sbjct: 192 TTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQIL 251
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
++M G P+ I+ + G +A +T R++ +
Sbjct: 252 DEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGL----------------- 294
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
LD ++ EA ++++ C+ + A + +M ++ P +
Sbjct: 295 ---------QLDVYTYEA----------LLKACCKSGRMQSALAVTKEMSAQNIPRNTFI 335
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N +I +++ GD+ A ++++ M+ G++PD++TYT ++ + G M+ A + + E K
Sbjct: 336 YNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMK 395
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
+ + TY TLI G+ + + AL EMK G++P+ Y+ L+ SL +A
Sbjct: 396 SVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLMTSLLSRA 452
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 134/293 (45%), Gaps = 3/293 (1%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
N Y I A +R D A ++ +M E G + ++ + G + +V+
Sbjct: 17 NAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVF 76
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
+E + P LI+ + + K AL++ + K+ +K +S +I +
Sbjct: 77 ERFKECGLNPSVITYGCLINLYAKLGKVSK-ALEVSKEMEHAGIKHNMKTYSMLINGFLK 135
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+KD A + +I +G P ++N++I+A+ G M A+ +K M+ + KP T
Sbjct: 136 LKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRT 195
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
+ ++ G+A G+M++A ++ + + + + TY+ LI G + + + A ++L+EM
Sbjct: 196 FMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMT 255
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRA 522
GV PN Y ++ D A +R +GL L+ T AL++A
Sbjct: 256 LAGVSPNEHTYTTIMHGYASLG-DTGKAFAYFTKLRDEGLQLDVYTYEALLKA 307
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
EAK+ HS L+ + Y +I YC+ D A L+ EM++ G+ +D Y+ ++
Sbjct: 6 FQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMM 60
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 143/310 (46%), Gaps = 2/310 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N LI FS+L + AF V K G + T+ I L F A ++M+
Sbjct: 122 FNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMV 181
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+G P+ II FCK GK A + + P + +I LC+ D V
Sbjct: 182 ASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCK-DRLV 240
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
ALD+ + G+ + + +S ++ LC A L ++M+S P FN +
Sbjct: 241 SEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNIL 300
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+ K G ++ A ++K+M +G++P+ TY LM+GY ++ EA + +
Sbjct: 301 VDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGC 360
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
+ V+Y+ LI GYCK + D A +L +EM G+ PN YN LI LC +A A
Sbjct: 361 MPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLC-QAGRHCEAR 419
Query: 500 KLLEDMRLKG 509
+L +DM+ +G
Sbjct: 420 ELFKDMQAQG 429
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 127/291 (43%), Gaps = 7/291 (2%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I F K+GK A + K G + Y I+ L + ++ A + ++
Sbjct: 193 NTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKG 252
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DE 317
G PD ++ C + +EA ++ + P L+ LC+E E
Sbjct: 253 KGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSE 312
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
+ M++ G YA ++S++ C V A+ + MI++G P +N
Sbjct: 313 AQGIIKIMIE--KGVEPNYA--TYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYN 368
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+I+ Y KA + A E+ M RGL P+ + Y L+SG G+ EA E+ + +
Sbjct: 369 ILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQ 428
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
VT L+ CKL D AL+L M+D ++PN+ Y+ LI+++
Sbjct: 429 GCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAM 479
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 127/291 (43%), Gaps = 5/291 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ ++K C +GK V ++K++ +K G + I N +I K A ++F+
Sbjct: 193 NTIIKGFCK-IGKTTVAV--GLLKKM-DKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFS 248
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ G + TY + L + A ++ +M+ +PD ++ CK G
Sbjct: 249 EIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEG 308
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
EA + + EK + P + L++ C +++ + A + D + + +
Sbjct: 309 MLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFE-ARMVFDAMITKGCMPNVVSY 367
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+ +I C+ + + A+ L +M G P +N++IS +AG A E+ K M++
Sbjct: 368 NILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQA 427
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
+G PD+ T T L+ G ++ A + + + + + VTY LIR
Sbjct: 428 QGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRA 478
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 89/209 (42%), Gaps = 1/209 (0%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A +FN+ + + T+ ++ L + + A + + MIE G P+ +++
Sbjct: 278 ASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMN 337
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
+C K EA +V+ K P LI+ C+ + + A ++ D+ S
Sbjct: 338 GYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKA-QRIDEARELFDEMSFRGLI 396
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
++++I LC+ A+ L M ++G P ++ + K G + A+ +
Sbjct: 397 PNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRL 456
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
+ M+ LKP++ TY L+ G++
Sbjct: 457 FRAMQDSCLKPNLVTYDILIRAMYKSGKI 485
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 69/141 (48%)
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
C + ++ A + MI + P P F+ ++SA + + + K + ++ DV
Sbjct: 60 CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNE 468
+ + L++ ++ +++ A +L + K VT+ +LI G C ++F A++ +E
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179
Query: 469 MKDVGVQPNVDEYNKLIQSLC 489
M G QPN+ YN +I+ C
Sbjct: 180 MVASGYQPNLHTYNTIIKGFC 200
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 173/372 (46%), Gaps = 22/372 (5%)
Query: 158 SGVVDALLKAICSSVGKKEVYALWDIVKEIGEKE--KGVLTVEILNELIALFSKLGKGKA 215
+ V+DA +++ K+ + ++ KE+ E + V T IL I F G
Sbjct: 173 NAVLDATIRS------KRNISFAENVFKEMLESQVSPNVFTYNIL---IRGFCFAGNIDV 223
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A +F+K GC+ N TY I+ + + D + + M G P+ +I+
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
C+ G+ KE V T + + LI C+E AL M +
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEG-NFHQALVMHAEMLRHGLT 342
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
++ ++S+I S+C+ +++ A L +M G P + +++ +S+ G M A +
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRV 402
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGY 453
L+ M G P V TY L++G+ G+ME+A +L + K+ LSP V+Y T++ G+
Sbjct: 403 LREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE--KGLSPDVVSYSTVLSGF 460
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE--KLLEDMRLKGLH 511
C+ + D AL++ EM + G++P+ Y+ LIQ C + RT E L E+M GL
Sbjct: 461 CRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQ---RRTKEACDLYEEMLRVGLP 517
Query: 512 LNGIT-RALIRA 522
+ T ALI A
Sbjct: 518 PDEFTYTALINA 529
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 137/306 (44%), Gaps = 10/306 (3%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I + G+ K V + G ++ TY I+ + F A + +M+
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR 338
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DE 317
G P +I CK G A R + + P + L+ Q+ +E
Sbjct: 339 HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNE 398
Query: 318 TVKLALDMLDD-FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
++ +M D+ FS ++ ++++I C + A +L M +G P +
Sbjct: 399 AYRVLREMNDNGFSP-----SVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSY 453
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
++V+S + ++ D+ A+ + + M +G+KPD TY+ L+ G+ + +EAC++ E +
Sbjct: 454 STVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLR 513
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
TY LI YC + + AL+L NEM + GV P+V Y+ LI L K R
Sbjct: 514 VGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLN-KQSRTR 572
Query: 497 TAEKLL 502
A++LL
Sbjct: 573 EAKRLL 578
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 153/398 (38%), Gaps = 91/398 (22%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K G A E ++ G N+ TY ++ S++ + A+ V +M + G
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETV 319
P +I+ C GK ++A V +EK + P + ++S C+ DE +
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 320 KLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
++ +M++ IKP +SS+I+ C + A L +M+ G PP
Sbjct: 471 RVKREMVEK--------GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFT 522
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+ ++I+AY GD+ A+++ M +G+ PDV TY+ L++G + EA +L +
Sbjct: 523 YTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLF 582
Query: 436 KNHSRLSPVTYHTLI--------------------------------------------- 450
S S VTYHTLI
Sbjct: 583 YEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTA 642
Query: 451 -----RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
G+C+ + A L EM G L+ ++ + AL
Sbjct: 643 YNIMIHGHCRAGDIRKAYTLYKEMVKSGF---------LLHTVTVIAL------------ 681
Query: 506 RLKGLH----LNGITRALIRAVKELEEDAIENGEALVE 539
+K LH +N + ++ ++ E E + LVE
Sbjct: 682 -VKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVE 718
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 152/376 (40%), Gaps = 53/376 (14%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI + K G A + + +G + TY I ++ + + A ++M
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 373
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ ++ F + G EA+ V + P LI+ C + ++
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK-ME 432
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A+ +L+D + + +S+V+ CR DV A + +M+ +G P ++S+I
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA------ 434
+ + A ++ + M GL PD +TYT L++ Y G +E+A ++ NE
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
Query: 435 --------------KKNHSR---------------LSPVTYHT---------------LI 450
K++ +R S VTYHT LI
Sbjct: 553 PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLI 612
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+G+C A ++ M +P+ YN +I C +A D R A L ++M G
Sbjct: 613 KGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHC-RAGDIRKAYTLYKEMVKSGF 671
Query: 511 HLNGITR-ALIRAVKE 525
L+ +T AL++A+ +
Sbjct: 672 LLHTVTVIALVKALHK 687
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 93/177 (52%), Gaps = 2/177 (1%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG-DMTPAMEMLKLM 399
F V++S R+ + A +++ + G PG +N+V+ A ++ +++ A + K M
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
+ P+V+TY L+ G+ G ++ A + ++ + + VTY+TLI GYCKL +
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
D KLL M G++PN+ YN +I LC + + +L +M +G L+ +T
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREG-RMKEVSFVLTEMNRRGYSLDEVT 312
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 77/150 (51%), Gaps = 4/150 (2%)
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ-MEEACEIL 431
++VF+ V+ +YS+ + A+ ++ L ++ G P V +Y ++ + + A +
Sbjct: 134 SSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVF 193
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC-L 490
E ++ + TY+ LIRG+C D AL L ++M+ G PNV YN LI C L
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253
Query: 491 KALDWRTAEKLLEDMRLKGLHLNGITRALI 520
+ +D KLL M LKGL N I+ ++
Sbjct: 254 RKID--DGFKLLRSMALKGLEPNLISYNVV 281
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 16/275 (5%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
+V N LI GK + A V + G + +Y + R D A V
Sbjct: 414 SVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVK 473
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+M+E G PD+ +I FC+ + KEA +Y + P + LI++ C E
Sbjct: 474 REMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCME 533
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ K AL + ++ + + +S +I L + AK LL K+ E P +
Sbjct: 534 GDLEK-ALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVT 592
Query: 376 FN---------------SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
++ S+I + G MT A ++ + M + KPD Y ++ G+
Sbjct: 593 YHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCR 652
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
G + +A + E K+ L VT L++ K
Sbjct: 653 AGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHK 687
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 161/352 (45%), Gaps = 12/352 (3%)
Query: 161 VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVF 220
++ L+K +C K+ D V G + V +LN L K+G+ + A ++
Sbjct: 83 LNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGL----CKIGETRCAVKLL 138
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
D N Y I+ L + K+ + A+ + +M G PD+ +I FC
Sbjct: 139 RMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLL 198
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
G+ A + K + P + LI++LC+E VK A ++L + E K +
Sbjct: 199 GQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGN-VKEAKNLLAVMTKEGIKPGVVT 257
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+S+++ C + +V AK + M+ G P +N +I+ K + AM +L+ M
Sbjct: 258 YSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREML 317
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP---VTYHTLIRGYCKLE 457
+ + PD TY L+ G G++ A ++NE H R P VTY +L+ CK +
Sbjct: 318 HKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEM---HHRGQPADVVTYTSLLDALCKNQ 374
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
D A L +MK+ G+QP + Y LI LC K + A++L + + +KG
Sbjct: 375 NLDKATALFMKMKERGIQPTMYTYTALIDGLC-KGGRLKNAQELFQHLLVKG 425
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 146/310 (47%), Gaps = 2/310 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
LN LI F LG+ +F V K G + T ++ L + + +K++
Sbjct: 48 LNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVV 107
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
G D G +++ CK G+ + A + + ++ P + +I LC+ D+ V
Sbjct: 108 AQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCK-DKLV 166
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
A D+ + ++++I C + + GA +LL +MI + PG ++N +
Sbjct: 167 NEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNIL 226
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I+A K G++ A +L +M G+KP V TY+ LM GY G+++ A +I + +
Sbjct: 227 INALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGV 286
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
+ +Y+ +I G CK + D A+ LL EM + P+ YN LI LC K+ +A
Sbjct: 287 NPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLC-KSGRITSAL 345
Query: 500 KLLEDMRLKG 509
L+ +M +G
Sbjct: 346 NLMNEMHHRG 355
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 150/348 (43%), Gaps = 52/348 (14%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
+ + L+ A+C KE L ++ + G K GV+T L + L +G+ + A ++
Sbjct: 222 IYNILINALCKEGNVKEAKNLLAVMTKEGIKP-GVVTYSTLMDGYCL---VGEVQNAKQI 277
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
F+ G N +Y I L + K D A ++ +M+ +PD+ +I CK
Sbjct: 278 FHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCK 337
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
G+ I+S AL+++++ + +
Sbjct: 338 SGR--------------------------ITS----------ALNLMNEMHHRGQPADVV 361
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
++S++ +LC+ +++ A L KM G P + ++I K G + A E+ + +
Sbjct: 362 TYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHL 421
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
+G DV+TYT ++SG G +EA I ++ + N + VT+ +IR + +E
Sbjct: 422 LVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDEN 481
Query: 460 DCALKLLNEM------------KDVGVQPNVDEYNKLIQSLCLKALDW 495
D A KLL+EM DV VQ D+ KL+ + K L W
Sbjct: 482 DKAEKLLHEMIAKGLLVLDFKVADVFVQNENDKAEKLLHEMIAKGLLW 529
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 87/179 (48%), Gaps = 1/179 (0%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
I F+ ++ SL +MK A +L +M +G N +I+ + G M + +L
Sbjct: 10 IIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLG 69
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
+ G +PD T LM G G+++++ ++ ++ V+Y TL+ G CK+
Sbjct: 70 KILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIG 129
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
E CA+KLL ++D +PNV YN +I LC L A L +M +G+ + IT
Sbjct: 130 ETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKL-VNEAYDLYSEMDARGIFPDAIT 187
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 149/348 (42%), Gaps = 35/348 (10%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V N LI + + A + N+ G+YGC + TY + AL +R +
Sbjct: 211 VNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLL 270
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE- 315
+M +G P+ ++ +CK KEA V L K M P ++ LC E
Sbjct: 271 QMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEG 330
Query: 316 --DETVKL-------------------------------ALDMLDDFSGEARKYAIKPFS 342
DE V+L A ++++ K +
Sbjct: 331 KIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHN 390
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+I+ C + A ++ KM+ G P +N++I+ Y KAG M A +M+ M +
Sbjct: 391 IMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRK 450
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
GLK D +T L+ Q+++A + +A+K L VTY TLI GY K E+ D A
Sbjct: 451 GLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRA 510
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
LKL EMK+ G+ + YN +I+ LCL + +KL E + KGL
Sbjct: 511 LKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLE-KGL 557
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 119/240 (49%), Gaps = 9/240 (3%)
Query: 286 AHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----F 341
H ++ + + P L+++L + + + L + +A K ++P F
Sbjct: 157 GHQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFS--REVFQDAVKLGVQPNVNTF 214
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+ +I C + A L+++M G P N +N+V++A K +T ++L M++
Sbjct: 215 NILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKN 274
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV-TYHTLIRGYCKLEEFD 460
GL P+ TY L+ GY ++EA E++ E L V TY+T++RG C + D
Sbjct: 275 SGLFPNRNTYNILVHGYCKLKWLKEAAEVI-ELMTGKGMLPDVWTYNTMVRGLCDEGKID 333
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
A++L ++M+ + P+V YN LI C + A KL+E+M+ +G+ NG+T ++
Sbjct: 334 EAVRLRDKMESFKLVPDVVTYNTLIDG-CFEHRGSDAAFKLVEEMKARGVKENGVTHNIM 392
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 147/375 (39%), Gaps = 41/375 (10%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELI-ALFSKLGKGKAAFEVF 220
+ +++ +C E L D + E K V V N LI F G AAF++
Sbjct: 320 NTMVRGLCDEGKIDEAVRLRDKM----ESFKLVPDVVTYNTLIDGCFEHRG-SDAAFKLV 374
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ G N T+ I+ D A +V KM+E+G PD +I+ +CK
Sbjct: 375 EEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKA 434
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE------------------------- 315
GK EA+ + K + + L+ ++C E
Sbjct: 435 GKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTY 494
Query: 316 ---------DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
DE AL + ++ I ++++IR LC A L++++
Sbjct: 495 GTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLE 554
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
+G P + N +I Y G + A + M LKPD++T L+ G G +E+
Sbjct: 555 KGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEK 614
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
+ N + VTY+ +I +CK + A L+ EM+ ++P+ YN ++
Sbjct: 615 GLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVT 674
Query: 487 SLCLKALDWRTAEKL 501
L KA AEKL
Sbjct: 675 GLT-KAGRTEEAEKL 688
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 144/370 (38%), Gaps = 60/370 (16%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ ++ C + E Y + D E+G K + T LN L+ + A+ +
Sbjct: 425 NTMINGYCKAGKMAEAYKMMD---EMGRKGLKLDTF-TLNTLLHTMCLEKQLDDAYTLTM 480
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
K G + ++ TY I + + D A + E+M ETG + II C G
Sbjct: 481 KARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSG 540
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP- 340
K +A EK + P +S +I C E A++ F + ++++KP
Sbjct: 541 KTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEG-----AVEKAFQFHNKMVEHSLKPD 595
Query: 341 -FSS--VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
F+ ++R LCR + TL + IS+G P +N +IS++ K + A +++
Sbjct: 596 IFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMT 655
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL- 456
M + L+PD YT Y+ ++ G K
Sbjct: 656 EMEGKNLEPDRYT-----------------------------------YNAIVTGLTKAG 680
Query: 457 ---EEFDCALKLLNEMKDVGVQPNVDE-------YNKLIQSLCLKALDWRTAEKLLEDMR 506
E ALK + + V Q E Y++ I SLC + ++ A KL +
Sbjct: 681 RTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQG-KYKDAMKLFQQAE 739
Query: 507 LKGLHLNGIT 516
KG+ LN T
Sbjct: 740 QKGVSLNKYT 749
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/305 (19%), Positives = 115/305 (37%), Gaps = 53/305 (17%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEI-LNELIALFSKLGKGKAAFE 218
++ LL +C + Y L + +++G + E+ LI + K + A +
Sbjct: 458 TLNTLLHTMCLEKQLDDAYTL-----TMKARKRGYILDEVTYGTLIMGYFKDEQADRALK 512
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
++ + + G VA TY I L D A +++E G +PD II +C
Sbjct: 513 LWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYC 572
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
G ++A + E + P L+ LC+E K L + + + + +
Sbjct: 573 WEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEK-GLTLFNTWISKGKPMDT 631
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG----------- 387
++ +I S C+ + + A L+++M + P +N++++ +KAG
Sbjct: 632 VTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALK 691
Query: 388 -----------DMTP------------------------AMEMLKLMRSRGLKPDVYTYT 412
D +P AM++ + +G+ + YTY
Sbjct: 692 FAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYI 751
Query: 413 GLMSG 417
LM G
Sbjct: 752 KLMDG 756
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 144/311 (46%), Gaps = 2/311 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
LN +I F + K A+ V K G + T+ I L A + ++M+
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMV 185
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
E G PD I++ C+ G A + E+ + + +I SLC+ D +
Sbjct: 186 ENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCR-DGCI 244
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
A+ + + + K ++ ++S++R LC+ + LL M+S P FN +
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+ + K G + A E+ K M +RG+ P++ TY LM GY ++ EA +L+ +N
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
VT+ +LI+GYC ++ D +K+ + G+ N Y+ L+Q C ++ + AE
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC-QSGKIKLAE 423
Query: 500 KLLEDMRLKGL 510
+L ++M G+
Sbjct: 424 ELFQEMVSHGV 434
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 137/309 (44%), Gaps = 3/309 (0%)
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
AA +F + G ++ TY + L + ++ + + M+ +P+ ++
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR 334
F K GK +EA+ +Y + + P L+ C ++ + A +MLD
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE-ANNMLDLMVRNKC 364
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
I F+S+I+ C +K V + + G ++ ++ + ++G + A E
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+ + M S G+ PDV TY L+ G + G++E+A EI + +K+ L V Y T+I G C
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG 514
K + + A L + GV+PNV Y +I LC K A LL M G N
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG-SLSEANILLRKMEEDGNAPND 543
Query: 515 IT-RALIRA 522
T LIRA
Sbjct: 544 CTYNTLIRA 552
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 1/196 (0%)
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
L LD + I + +I CR A ++L K++ G P FN++I
Sbjct: 106 LVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLI 165
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ G ++ A+ ++ M G +PD+ TY +++G G A ++L + ++ + +
Sbjct: 166 NGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVK 225
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
TY T+I C+ D A+ L EM+ G++ +V YN L++ LC KA W
Sbjct: 226 ADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC-KAGKWNDGAL 284
Query: 501 LLEDMRLKGLHLNGIT 516
LL+DM + + N IT
Sbjct: 285 LLKDMVSREIVPNVIT 300
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 151/343 (44%), Gaps = 7/343 (2%)
Query: 154 KWVTSGVV--DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLG 211
K + S VV ++L++ +C + GK AL ++K++ +E V V N L+ +F K G
Sbjct: 257 KGIKSSVVTYNSLVRGLCKA-GKWNDGAL--LLKDMVSREI-VPNVITFNVLLDVFVKEG 312
Query: 212 KGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVG 271
K + A E++ + G N TY ++ + A ++ + M+ PD
Sbjct: 313 KLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFT 372
Query: 272 KIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSG 331
+I +C + + V+ ++ + + L+ CQ + +KLA ++ +
Sbjct: 373 SLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK-IKLAEELFQEMVS 431
Query: 332 EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
+ + ++ LC + A + + G ++ ++I K G +
Sbjct: 432 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED 491
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
A + + +G+KP+V TYT ++SG G + EA +L + +++ + + TY+TLIR
Sbjct: 492 AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
+ + + + KL+ EMK G + +I L LD
Sbjct: 552 AHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELD 594
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 85/189 (44%), Gaps = 6/189 (3%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
FS ++ R K + ++ G N +I+ + + A +L +
Sbjct: 91 FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM 150
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G +PD T+ L++G G++ +A +++ +N + VTY++++ G C+ +
Sbjct: 151 KLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTS 210
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH-----LNGI 515
A +L +M++ V+ +V Y+ +I SLC A L ++M KG+ N +
Sbjct: 211 LAFDMLRKMEERNVKADVFTYSTIIDSLCRDGC-IDAAISLFKEMETKGIKSSVVTYNSL 269
Query: 516 TRALIRAVK 524
R L +A K
Sbjct: 270 VRGLCKAGK 278
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 81/191 (42%), Gaps = 15/191 (7%)
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A L +MI P PG F+ SA ++ ++ K + G+ ++YT +++
Sbjct: 72 AIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
+ + A +L + K T++TLI G C + A+ L++ M + G QP
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQP 191
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMR--------------LKGLHLNGITRALIRA 522
++ YN ++ +C ++ D A +L M + L +G A I
Sbjct: 192 DMVTYNSIVNGIC-RSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 523 VKELEEDAIEN 533
KE+E I++
Sbjct: 251 FKEMETKGIKS 261
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 145/299 (48%), Gaps = 6/299 (2%)
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
K A +F + + G N TY I + +M G LP+ I
Sbjct: 185 KIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTI 244
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEA 333
I +CK K EA + L K + P +I+ LC+E + +K ++L++ S
Sbjct: 245 IDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQ-MKETSEILEEMS--K 301
Query: 334 RKYAIK--PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
R+Y F+++I C + + H A L ++M+ G P + ++I++ KAG++
Sbjct: 302 RRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNR 361
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
AME L MR RGL P+ TYT L+ G++ G +++A +I+ E +N + +TY+ LI
Sbjct: 362 AMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALIN 421
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
G+C L + A LL EM + G P+V Y+ +I C + + A +L +M KG+
Sbjct: 422 GHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFC-RNQELEKAFQLKVEMVAKGI 479
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 152/328 (46%), Gaps = 33/328 (10%)
Query: 237 FTIEALSRRKIFDWAWSVCEKMI-----ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYT 291
+ L+R K++ A S+ E+++ ETG D + K + CK A VV +
Sbjct: 84 LALHILTRYKLYKTAQSLAEEVVVNTVDETGE--DLFQCLKNSYYQCKSSSAVFDLVVKS 141
Query: 292 LAREKKMYPPQSVVAF---------------LISSLCQEDETVKLALDMLDDFSGEARKY 336
AR + S+V ++ ++ + ++VK+A + +
Sbjct: 142 CARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSP 201
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ ++ +IR C ++ +M G P +N++I AY K + A ++L
Sbjct: 202 NVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLL 261
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
+LM +GL P++ +Y +++G GQM+E EIL E K VT++TLI GYC +
Sbjct: 262 RLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNV 321
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
F AL L EM G+ PNV Y LI S+C KA + A + L+ MR +GLH NG T
Sbjct: 322 GNFHQALVLHAEMVKNGLSPNVVTYTTLINSMC-KAGNLNRAMEFLDQMRDRGLHPNGRT 380
Query: 517 ----------RALIRAVKELEEDAIENG 534
+ ++ ++ ++ +ENG
Sbjct: 381 YTTLIDGFSQQGFLKQAYQIMKEMVENG 408
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 152/329 (46%), Gaps = 6/329 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVL-TVEILNELIALFSKLGKGKAAFEVF 220
+A+L A+ + K+ V I KE+ E GV V N LI F G + F
Sbjct: 171 NAILDAVIRT--KQSVKIAEGIFKEM--VESGVSPNVYTYNILIRGFCTAGNLEMGLXFF 226
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ GC+ N TY I+A + + A+ + M G P+ +I+ C+
Sbjct: 227 GEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCRE 286
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
G+ KE + +++ P + LI+ C + AL + + +
Sbjct: 287 GQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQ-ALVLHAEMVKNGLSPNVVT 345
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++++I S+C+ +++ A L +M G P + ++I +S+ G + A +++K M
Sbjct: 346 YTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMV 405
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G P + TY L++G+ G+ME+A +L E + V+Y T+I G+C+ +E +
Sbjct: 406 ENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELE 465
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A +L EM G+ P+V Y+ LIQ LC
Sbjct: 466 KAFQLKVEMVAKGISPDVATYSSLIQGLC 494
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 164/373 (43%), Gaps = 16/373 (4%)
Query: 152 FFKWVTSGV------VDALLKAICSSVGKKEVYALWDIVKEIGEKEK-GVL-TVEILNEL 203
F + V SGV + L++ C++ G E+ + GE E+ G L V N +
Sbjct: 191 FKEMVESGVSPNVYTYNILIRGFCTA-GNLEMGLXF-----FGEMERNGCLPNVVTYNTI 244
Query: 204 IALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGS 263
I + KL K AF++ G N +Y I L R + E+M +
Sbjct: 245 IDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRY 304
Query: 264 LPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLAL 323
+PD +I+ +C G +A V++ + + P LI+S+C+ + A+
Sbjct: 305 VPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAG-NLNRAM 363
Query: 324 DMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAY 383
+ LD + ++++I + + A ++ +M+ G P +N++I+ +
Sbjct: 364 EFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGH 423
Query: 384 SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
G M A +L+ M RG PDV +Y+ ++SG+ ++E+A ++ E
Sbjct: 424 CILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDV 483
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
TY +LI+G CK L EM +G+ P+ Y LI + C++ D A +L +
Sbjct: 484 ATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEG-DLDKALRLHD 542
Query: 504 DMRLKGLHLNGIT 516
+M KG + +T
Sbjct: 543 EMIQKGFSPDIVT 555
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 133/299 (44%), Gaps = 16/299 (5%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K G A E ++ D G N TY I+ S++ A+ + ++M+E G
Sbjct: 349 LINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENG 408
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P +I+ C G+ ++A + E+ P + +IS C+ E K A
Sbjct: 409 FTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEK-A 467
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+ + + + +SS+I+ LC+ + + L +M+S G PP + S+I+A
Sbjct: 468 FQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINA 527
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y GD+ A+ + M +G PD+ TY L++G+ + +EA +L + S +
Sbjct: 528 YCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPN 587
Query: 443 PVTYHTLI---------------RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
+TY+TLI +G+C + A ++L M G + N + YN +I
Sbjct: 588 EITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIH 646
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 99/259 (38%), Gaps = 21/259 (8%)
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
++F + G ++ TY I A D A + ++MI+ G PD +I+ F
Sbjct: 504 DLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGF 563
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
K + KEA K++ L+ L +E ++ + L D
Sbjct: 564 NKQSRTKEA---------KRL---------LLKLLYEESVPNEITYNTLID---NCNNLE 602
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
K ++++ C ++ A +L M+ +G V+N +I +SK G++ A + K
Sbjct: 603 FKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYK 662
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M G P T L + G+ E ++L+ K+ LI K
Sbjct: 663 EMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEG 722
Query: 458 EFDCALKLLNEMKDVGVQP 476
D +L +M G+ P
Sbjct: 723 NMDAVFNVLKDMALSGLLP 741
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 139/305 (45%), Gaps = 2/305 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I SK G+ A + N+ D GC+ + T+ I AL + + A + ++
Sbjct: 339 NTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTV 398
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD +I+ CK G ++ + P + LI LC + V
Sbjct: 399 KGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVN 458
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
ALD+L + + ++++I +LC+ + A+ + +M + G FN++I
Sbjct: 459 -ALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLI 517
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
KA + A E+++ M GL+P TY +++ Y G +++A +IL N
Sbjct: 518 DGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFE 577
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+ VTY TLI G CK ALKLL M+ G++P YN +IQSL + + R A
Sbjct: 578 IDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSL-FRRNNLRDALS 636
Query: 501 LLEDM 505
L +M
Sbjct: 637 LFREM 641
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 141/320 (44%), Gaps = 2/320 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V LN LI + + + A + + + ++ T+ ++ + A V
Sbjct: 195 VVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKT 254
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
KM+ETG P V +I+ +CK G+ ++A P Q + LCQ
Sbjct: 255 KMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNG 314
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
V AL ++D E + +++VI L + ++ AK ++++M+ G P F
Sbjct: 315 H-VSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTF 373
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N++I A + A+++ + + +GL PDVYT+ L++ G + E K
Sbjct: 374 NTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKS 433
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ VTY+ LI C + + AL LL EM+ G + YN +I +LC K +
Sbjct: 434 SGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALC-KQMRIE 492
Query: 497 TAEKLLEDMRLKGLHLNGIT 516
AE++ + M G+ + +T
Sbjct: 493 EAEEVFDQMDAHGISRSAVT 512
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 156/352 (44%), Gaps = 11/352 (3%)
Query: 163 ALLKAICSSVGKKEVYALWD-IVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFE-VF 220
A+ + I +G + L + +V+E+ +E ++ + +++L + A + V
Sbjct: 90 AVYEEIIQKLGTAGAFDLMEGLVREM-RREGHEAGAGVVRSFVESYARLRRFDDAVDLVR 148
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
N+ +G A+ Y + L+ SV +M + G PD + +I C+
Sbjct: 149 NQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRA 208
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYA 337
+ + A ++ + P ++ L+ +E + +++ M++ R
Sbjct: 209 HQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRV-- 266
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+ +I C+M V A + K I++G P +N+ + + G ++ A++++
Sbjct: 267 --TVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMD 324
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
LM G PDV+TY +++ + G+++EA I+N+ T++TLI C
Sbjct: 325 LMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQN 384
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
+ AL L E+ G+ P+V +N LI +LC K D +L E+M+ G
Sbjct: 385 RLEEALDLARELTVKGLSPDVYTFNILINALC-KVGDPHLGIRLFEEMKSSG 435
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 128/252 (50%), Gaps = 1/252 (0%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
+E L +R + A ++ +++++ G P+ +I CKG K EA +++ + +
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL 398
Query: 299 YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
P + LI C+ + + AL L + K ++ P++S+I C+ D+ A+
Sbjct: 399 RPNDVTYSILIDMFCRRGK-LDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAE 457
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+++MI++ P + S++ Y G + A+ + M +G+ P +YT+T L+SG
Sbjct: 458 GFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL 517
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G + +A ++ NE + + + + VTY+ +I GYC+ + A + L EM + G+ P+
Sbjct: 518 FRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDT 577
Query: 479 DEYNKLIQSLCL 490
Y LI LCL
Sbjct: 578 YSYRPLIHGLCL 589
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 139/309 (44%), Gaps = 5/309 (1%)
Query: 205 ALFSKLGKGKAAFE---VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET 261
AL L KG+ E +F++ G G N TY I+ RR D A S +M++T
Sbjct: 372 ALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDT 431
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
G +I+ CK G A KK+ P L+ C + + K
Sbjct: 432 GLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK- 490
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
AL + + +G+ +I F++++ L R + A L ++M P +N +I
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE 550
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
Y + GDM+ A E LK M +G+ PD Y+Y L+ G GQ EA ++ K + L
Sbjct: 551 GYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCEL 610
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+ + Y L+ G+C+ + + AL + EM GV ++ Y LI LK D + L
Sbjct: 611 NEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG-SLKHKDRKLFFGL 669
Query: 502 LEDMRLKGL 510
L++M +GL
Sbjct: 670 LKEMHDRGL 678
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 129/287 (44%), Gaps = 20/287 (6%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
+ L + + F A + M+ G PD +I C+ + L+R K+M
Sbjct: 199 LHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCE---------LKDLSRAKEM 249
Query: 299 YPPQ-------SVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLC 349
++V + LI LC++ + V A+ + D +G+ K + + +++ LC
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKK-QKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLC 308
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
++++ ++ +M+ P A +S++ K G + A+ ++K + G+ P+++
Sbjct: 309 KVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLF 368
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
Y L+ G + EA + + K R + VTY LI +C+ + D AL L EM
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Query: 470 KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
D G++ +V YN LI C K D AE + +M K L +T
Sbjct: 429 VDTGLKLSVYPYNSLINGHC-KFGDISAAEGFMAEMINKKLEPTVVT 474
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 99/200 (49%), Gaps = 1/200 (0%)
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
LA+++ +D + + ++ VIRSLC +KD+ AK +++ M + G +N +I
Sbjct: 210 LAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLI 269
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
K + A+ + K + + LKPDV TY L+ G + E E+++E
Sbjct: 270 DGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFS 329
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
S +L+ G K + + AL L+ + D GV PN+ YN LI SLC K + AE
Sbjct: 330 PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLC-KGRKFHEAEL 388
Query: 501 LLEDMRLKGLHLNGITRALI 520
L + M GL N +T +++
Sbjct: 389 LFDRMGKIGLRPNDVTYSIL 408
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 143/345 (41%), Gaps = 13/345 (3%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V L+ L+ K A E+FN G + Y I +L K A +
Sbjct: 192 VRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIA 251
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
M TG + +I CK K EA + K + P L+ LC+
Sbjct: 252 HMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQ 311
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
E ++ L+M+D+ + SS++ L + + A L+ +++ G P V+
Sbjct: 312 E-FEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVY 370
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N++I + K A + M GL+P+ TY+ L+ + G+++ A L E
Sbjct: 371 NALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD 430
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+LS Y++LI G+CK + A + EM + ++P V Y L+ C K
Sbjct: 431 TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKG-KIN 489
Query: 497 TAEKLLEDMRLKGLH---------LNGITRA-LIR-AVKELEEDA 530
A +L +M KG+ L+G+ RA LIR AVK E A
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA 534
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 130/293 (44%), Gaps = 10/293 (3%)
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH 287
C N+ Y + R + A SVC++M++ G D G +I K K+
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLID---GSLKHKDRK 664
Query: 288 VVYTLARE---KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSV 344
+ + L +E + + P + +I + + + K A + D E +++V
Sbjct: 665 LFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGD-FKEAFGIWDLMINEGCVPNEVTYTAV 723
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG-DMTPAMEMLKLMRSRG 403
I LC+ V+ A+ L SKM P + + +K DM A+E+ + +G
Sbjct: 724 INGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL-KG 782
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
L + TY L+ G+ G++EEA E++ + +TY T+I C+ + A+
Sbjct: 783 LLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAI 842
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+L N M + G++P+ YN LI C+ A + A +L +M +GL N T
Sbjct: 843 ELWNSMTEKGIRPDRVAYNTLIHGCCV-AGEMGKATELRNEMLRQGLIPNNKT 894
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 107/264 (40%), Gaps = 36/264 (13%)
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
K F + + D G + Y I+A S+ F A+ + + MI G +P+ +
Sbjct: 664 KLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAV 723
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEA 333
I+ CK G EA V+ + KM P SV T LD+L +
Sbjct: 724 INGLCKAGFVNEAEVLCS-----KMQPVSSV---------PNQVTYGCFLDILTKGEVDM 769
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
+K ++H A I +G A +N +I + + G + A
Sbjct: 770 QKAV---------------ELHNA-------ILKGLLANTATYNMLIRGFCRQGRIEEAS 807
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
E++ M G+ PD TYT +++ +++A E+ N + R V Y+TLI G
Sbjct: 808 ELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGC 867
Query: 454 CKLEEFDCALKLLNEMKDVGVQPN 477
C E A +L NEM G+ PN
Sbjct: 868 CVAGEMGKATELRNEMLRQGLIPN 891
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 1/209 (0%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
I +I SK G K AF +++ + GCV N+ TY I L + + A +C KM
Sbjct: 684 IYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKM 743
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
S+P+ G + KG + V A K + + LI C++
Sbjct: 744 QPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGR- 802
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
++ A +++ G+ ++++I LCR DV A L + M +G P +N+
Sbjct: 803 IEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNT 862
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
+I AG+M A E+ M +GL P+
Sbjct: 863 LIHGCCVAGEMGKATELRNEMLRQGLIPN 891
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 149/327 (45%), Gaps = 15/327 (4%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+ K GK + A E+ + C + TY + L + D A + E M+E
Sbjct: 341 NCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLE 400
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ +I FCK GK E H V L +E P + LI C+ +
Sbjct: 401 RGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANR--- 457
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
M D F+ +SS++ LC V A+ ++ M +G PP ++ + +I
Sbjct: 458 ----MQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALII 513
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
A++ML++M RG +P++YTY+ L++G ++E+A +L+ +
Sbjct: 514 GGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCV 573
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
TY +LI G+CK+ + D A + M+D G +P+ YN LI C EK
Sbjct: 574 PDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSG----NVEK 629
Query: 501 LLEDMRL---KGLHLNGITR-ALIRAV 523
+E M+L KG + + T +L+R++
Sbjct: 630 AIEVMQLMLEKGCNPDAATYFSLMRSL 656
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 157/347 (45%), Gaps = 14/347 (4%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
L+ +C E Y L D E+ +K+ + N LIA K+GK AA V
Sbjct: 98 LIHGLCQCQRIDEAYQLLD---EMIQKDCHP-DAAVYNCLIAGLCKMGKIDAARNVLKMM 153
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
+ CV + TY I + D A + EKM E+G PD+ +++ CK +
Sbjct: 154 LERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQL 213
Query: 284 KEA----HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
+E + RE + +VVA L S + +E K+ M++ G +
Sbjct: 214 EEVSKLLEEMVEAGREPDTFSYNTVVACLCESG-KYEEAGKILEKMIEKKCGPD----VV 268
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
++S++ C++ + A+ LL M+ P + ++I +S+A + A +++ M
Sbjct: 269 TYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDM 328
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
G+ PD+ TY L+ G G++EEA E+L + VTY L+ G CKL +
Sbjct: 329 FKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKV 388
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
D A LL M + G QPN+ +N +I C KA K+LE M+
Sbjct: 389 DDARLLLEMMLERGCQPNLVTFNTMIDGFC-KAGKVDEGHKVLELMK 434
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 147/324 (45%), Gaps = 12/324 (3%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N ++ + ++G A F G C TY I L + + D A+ + ++MI+
Sbjct: 63 NTILKAYCQIGDLDRALSHFR--GKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQ 120
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
PD+ +I+ CK GK A V + E+ P LI CQ +
Sbjct: 121 KDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTN---- 176
Query: 321 LALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
ALD + ++ + P +++++ LC+ + LL +M+ G P +
Sbjct: 177 -ALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSY 235
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N+V++ ++G A ++L+ M + PDV TY LM G+ +M+EA +L +
Sbjct: 236 NTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVG 295
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ +TY TLI G+ + + A +++ +M G+ P++ YN L+ LC KA
Sbjct: 296 RRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLC-KAGKLE 354
Query: 497 TAEKLLEDMRLKGLHLNGITRALI 520
A +LLE M K + +T +++
Sbjct: 355 EAHELLEVMVEKDCAPDVVTYSIL 378
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 117/249 (46%), Gaps = 16/249 (6%)
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
S P + G +I+ F + G +K + ++ P ++ + CQ + +
Sbjct: 20 SKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDR-- 77
Query: 323 LDMLDDFSGE------ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
L F G+ A Y I +I LC+ + + A LL +MI + P AV+
Sbjct: 78 --ALSHFRGKMWCSPTAFTYCI-----LIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVY 130
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N +I+ K G + A +LK+M R PDV TYT L+ G ++EA +++ + K+
Sbjct: 131 NCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKE 190
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ V Y+ L+ G CK + + KLL EM + G +P+ YN ++ LC ++ +
Sbjct: 191 SGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLC-ESGKYE 249
Query: 497 TAEKLLEDM 505
A K+LE M
Sbjct: 250 EAGKILEKM 258
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
S+ P N+ + ++I+ +S+AG+ +E+ M +R PDV T+ ++ Y G ++
Sbjct: 17 SDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLD 76
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
A + + K + TY LI G C+ + D A +LL+EM P+ YN LI
Sbjct: 77 RA--LSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLI 134
Query: 486 QSLC 489
LC
Sbjct: 135 AGLC 138
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 49/113 (43%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K + + A V + + GCV + TY I+ + D A+ + M ++G
Sbjct: 547 LINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSG 606
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
PD +IS FC+ G ++A V L EK P + L+ SL E
Sbjct: 607 CEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSLTTE 659
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 146/306 (47%), Gaps = 4/306 (1%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRR-KIFDWAWSVCEKMIETGSLPDSEKVGKII 274
AF V G N T+ + LS + KI D A + ++M++ G PD II
Sbjct: 31 AFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIID-AVKLFDEMVKMGYEPDVITYSTII 89
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR 334
+ CK G A + EK P V + +I SLC+ D+ + A++ L +
Sbjct: 90 NGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCK-DKLITEAMEFLSEMVNRGI 148
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
+ +SS++ C + + A +L +M+ P FN ++ SK G + A
Sbjct: 149 SPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQC 208
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+ + M +G++P+V TY LM GY + QM+EA ++ N + S +Y+ LI+G+C
Sbjct: 209 VFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHC 268
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG 514
K D A LL EM + P+ Y+ L++ C + A+KLLE+MR GL +
Sbjct: 269 KSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDG-RPQDAQKLLEEMRSYGLLPDL 327
Query: 515 ITRALI 520
+T +++
Sbjct: 328 MTYSIV 333
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 172/392 (43%), Gaps = 17/392 (4%)
Query: 131 HEDFVLKVLETPLVLG--ENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIG 188
H F VL LG N V F LL + S + L+D + ++G
Sbjct: 27 HFHFAFSVLGNMFKLGLQPNHVTF---------STLLNGLSSKAKIIDAVKLFDEMVKMG 77
Query: 189 EKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
+ + I+N L K+G A ++ K + GC N Y I++L + K+
Sbjct: 78 YEPDVITYSTIINGL----CKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLI 133
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
A +M+ G P+ I+ FC G++ EA ++ E+ + P L
Sbjct: 134 TEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNIL 193
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
+ L +E ++ A + + + + + +++++ C + A+ L + M+ +G
Sbjct: 194 VDGLSKEGMILE-AQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKG 252
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P +N +I + K+G + A +L M + L PD TY+ LM G+ G+ ++A
Sbjct: 253 CAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQ 312
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
++L E + +TY ++ G CK D A +LL M++ ++PN+ Y LIQ +
Sbjct: 313 KLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGM 372
Query: 489 CLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
C A +L ++ +KG+ + +T ++
Sbjct: 373 C-NFGKLEAARELFSNLFVKGIQPDVVTYTVM 403
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 145/322 (45%), Gaps = 2/322 (0%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
F LG+ A +F + + + + T+ ++ LS+ + A V E MIE G P+
Sbjct: 162 FCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPN 221
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
++ +C + EA ++ + K P LI C+ + A +L
Sbjct: 222 VNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGR-IDEAKGLL 280
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
+ S +A +S++++ C+ A+ LL +M S G P ++ V+ K
Sbjct: 281 AEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQ 340
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
G + A E+LK M+ ++P+++ YT L+ G N G++E A E+ + + VTY
Sbjct: 341 GHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTY 400
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
+I G K + A +L +M G PN YN +IQ L+ D A +L+E+M
Sbjct: 401 TVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGF-LRNGDTSNAGRLIEEMV 459
Query: 507 LKGLHLNGITRALIRAVKELEE 528
+G + T ++ ++ +E
Sbjct: 460 GRGFSADSSTFQMLSDLESRDE 481
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 3/119 (2%)
Query: 404 LKPDVYTYTGLMSGY--ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
++PDVYT T L++ + +N A +L K + + VT+ TL+ G +
Sbjct: 6 IRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIID 65
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
A+KL +EM +G +P+V Y+ +I LC K A +LL+ M KG N + + I
Sbjct: 66 AVKLFDEMVKMGYEPDVITYSTIINGLC-KMGSTTMAIQLLKKMEEKGCKPNVVVYSTI 123
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 146/336 (43%), Gaps = 37/336 (11%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG------------- 262
AF VF++ GC N TY I L D A + E+MIE G
Sbjct: 252 AFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPIT 311
Query: 263 ----------------------SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP 300
P+ + +IS + GK + A +Y ++ + P
Sbjct: 312 ALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVP 371
Query: 301 PQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTL 360
LI+ LC AL + G + ++ +I+ LC D+ A L
Sbjct: 372 NTVTYNALINELCVGGR-FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVL 430
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
KM+ GP P +N++I+ Y G++ A +L LM+ G +PD +TY L+SG++
Sbjct: 431 FEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSK 490
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
G++E A E + +PV+Y LI G+ K + D AL LL M+++G PNV+
Sbjct: 491 WGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVES 550
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
YN +I L K + AEK+ + M +GL N IT
Sbjct: 551 YNAVINGLS-KENRFSEAEKICDKMVEQGLLPNVIT 585
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 127/279 (45%), Gaps = 5/279 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI SK GK A + + + GC N E+Y I LS+ F A +C+KM+E G
Sbjct: 519 LIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQG 578
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
LP+ +I C+ G+ + A ++ ++K P + LI LCQE +
Sbjct: 579 LLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKA---- 634
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
D + S + + +S+++ LCR + A+ L+ M G P ++ S++ A
Sbjct: 635 -DEAERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIA 693
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ K ++ A+++ + ++G + + Y L+ GQ+EEA + + +
Sbjct: 694 HCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNAD 753
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEY 481
+ + L+ G K E D +KLL+ M+ PN+ Y
Sbjct: 754 EIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTY 792
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 111/229 (48%), Gaps = 6/229 (2%)
Query: 266 DSEKVGKIISWFCKGGKAKEAHVVYT-----LAREKKMYPPQSVVAFLISSLCQEDETVK 320
D+E V + W K K + L R++ ++ P + L+ C+ +E ++
Sbjct: 87 DTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDR-VFAPADHIRILMIKACRNEEEIR 145
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
D L++ SG +++ ++++ L + + V GA+ L +M++ G P FN++I
Sbjct: 146 RVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLI 205
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ SK G + A +L + L PDV+TYT L+ G+ ++ A + + K
Sbjct: 206 NILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCD 265
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ VTY TLI G C D AL +L EM + G++P V Y I +LC
Sbjct: 266 PNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALC 314
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 155/350 (44%), Gaps = 41/350 (11%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
V+ LI+ S+LGK + A +++K G V N TY I L F A +
Sbjct: 337 NVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIF 396
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLC 313
M GSL +++ +II C GG ++A V++ + KM P +VV + LI+
Sbjct: 397 HWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLF--EKMLKMGPLPTVVTYNTLINGYL 454
Query: 314 QEDETVKLA--LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
+ A LD++ + E ++ ++ ++ + + A +M+ G P
Sbjct: 455 TKGNVNNAARLLDLMKENGCEPDEWT---YNELVSGFSKWGKLESASFYFQEMVECGLNP 511
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+ ++I +SK G + A+ +LK M G P+V +Y +++G + + EA +I
Sbjct: 512 NPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKIC 571
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK--------------------- 470
++ + + +TY TLI G C+ A K+ ++M+
Sbjct: 572 DKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQE 631
Query: 471 ----------DVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
++G +P +D Y+ L+ LC K + AE+L++DM+ +G
Sbjct: 632 GKADEAERMSEIGCEPTLDTYSTLVSGLCRKG-RFYEAEQLVKDMKERGF 680
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 125/264 (47%), Gaps = 2/264 (0%)
Query: 242 LSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPP 301
L++ ++ + A ++ ++M+ +G P +I+ K GK +EA ++ + + + P
Sbjct: 173 LAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPD 232
Query: 302 QSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLL 361
LI C+ + + LA + D E +S++I LC V A +L
Sbjct: 233 VFTYTSLILGHCR-NRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDML 291
Query: 362 SKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG 421
+MI +G P + I+A A+E++ M+ RG +P+V TYT L+SG +
Sbjct: 292 EEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRL 351
Query: 422 GQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEY 481
G++E A + ++ K + VTY+ LI C F ALK+ + M+ G N Y
Sbjct: 352 GKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTY 411
Query: 482 NKLIQSLCLKALDWRTAEKLLEDM 505
N++I+ LCL D A L E M
Sbjct: 412 NEIIKGLCLGG-DIEKAMVLFEKM 434
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 132/310 (42%), Gaps = 37/310 (11%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N LI + SK GK + A + ++ Y + TY I R + D A+ V ++M+
Sbjct: 201 FNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMV 260
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G P+S +I+ C G+ E
Sbjct: 261 KEGCDPNSVTYSTLINGLCNEGRVDE---------------------------------- 286
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
ALDML++ + + + ++ I +LC ++ A L+++M G P + ++
Sbjct: 287 --ALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTAL 344
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
IS S+ G + A+ + M GL P+ TY L++ GG+ A +I + + + S
Sbjct: 345 ISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGS 404
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
+ TY+ +I+G C + + A+ L +M +G P V YN LI K + A
Sbjct: 405 LANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKG-NVNNAA 463
Query: 500 KLLEDMRLKG 509
+LL+ M+ G
Sbjct: 464 RLLDLMKENG 473
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 130/305 (42%), Gaps = 41/305 (13%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
NEL++ FSK GK ++A F + + G N +Y I+ S+ D A S+ ++M E
Sbjct: 482 NELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEE 541
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ E +I+ K + EA + E+ + P LI LC+ T
Sbjct: 542 MGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRT-- 599
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
++A K F + + C P ++S+I
Sbjct: 600 --------------QFAFKIFHDMEKRKCL--------------------PNLYTYSSLI 625
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ G A M ++ G +P + TY+ L+SG G+ EA +++ + K+
Sbjct: 626 YGLCQEGKADEAERMSEI----GCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFC 681
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
Y++L+ +CK E D ALK+ + ++ G Q ++ Y LI +LC KA A+
Sbjct: 682 PDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALC-KAGQVEEAQA 740
Query: 501 LLEDM 505
L ++M
Sbjct: 741 LFDNM 745
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 101/225 (44%), Gaps = 6/225 (2%)
Query: 191 EKGVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
E+G+L V LI + G+ + AF++F+ C+ N TY I L + D
Sbjct: 576 EQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKAD 635
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A E+M E G P + ++S C+ G+ EA + +E+ P + + L+
Sbjct: 636 EA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLL 691
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
+ C+ E V AL + + + + + ++I +LC+ V A+ L M+ +
Sbjct: 692 IAHCKNLE-VDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEW 750
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
V+ ++ K G++ M++L +M S+ P++ TY L
Sbjct: 751 NADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVIL 795
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 176/397 (44%), Gaps = 55/397 (13%)
Query: 176 EVYALWDIVK---EIGEKEKGV-LTVE-----------ILNELIALFSKLGKGKAAFEVF 220
+VY+ ++K E GE EK L VE I LI K G+ + A ++F
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLF 221
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ G +G VAN+ TY I L + I + + EKM E G P+ +++ CK
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKD 281
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDM------------ 325
G+ K+A ++ RE+ + LI LC+E +E K+ M
Sbjct: 282 GRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITY 341
Query: 326 ---LDDFSG------------EARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMIS 366
+D F G + + + P ++ ++ C+ D GA ++ +M
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEE 401
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
G P + +I +++ +M A+++ M GL PDV+TY+ L+ G+ GQM E
Sbjct: 402 RGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNE 461
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A + + V Y+T++ GYCK AL+L EM++ + PNV Y +I+
Sbjct: 462 ASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIE 521
Query: 487 SLCLKALDWRTAEKLLEDMRLKGLH-----LNGITRA 518
LC K + AE L+E M G+ LN I+RA
Sbjct: 522 VLC-KERKSKEAEGLVEKMIDTGIDPSDSILNLISRA 557
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 152/327 (46%), Gaps = 5/327 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
++++ CSS KE + G E V+T N L+ K G+ A ++F+
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDG-VEPDVVTY---NSLMDYLCKNGRCTEARKMFD 328
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G TY ++ + + + + M+ G P+ +I + K G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
K +A +V++ R++ + P +I LC+ V+ A+ + E +
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGR-VEDAMRYFEQMIDERLSPGNIVY 447
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+S+I SLC AK L+ +M+ G FNS+I ++ K G + + ++ LM
Sbjct: 448 NSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVR 507
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+KPD+ TY+ L+ GY G+M+EA ++L + VTY+TLI GYCK+ +
Sbjct: 508 IGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMED 567
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSL 488
AL L EM+ GV P++ YN ++Q L
Sbjct: 568 ALVLFREMESSGVSPDIITYNIILQGL 594
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 145/310 (46%), Gaps = 15/310 (4%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G N + I A +++ D A V KM + G PD+ G +I CK G+ ++A
Sbjct: 369 GIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDA 428
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLC---QEDETVKLALDMLDDFSGEARKYAIKP--F 341
+ ++++ P V LI SLC + D+ +L L+MLD R + F
Sbjct: 429 MRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLD------RGICLDTIFF 482
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+S+I S C+ V ++ L M+ G P ++++I Y AG M A ++L M S
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 542
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+KPD TY L++GY +ME+A + E + + +TY+ +++G +
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 602
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD---WRTAEKL-LEDMRLKGLHLNGITR 517
A +L + + G Q + YN ++ LC L R + L L D++L+ N +
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 662
Query: 518 ALIRAVKELE 527
AL++ + E
Sbjct: 663 ALLKVGRNDE 672
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 120/273 (43%), Gaps = 3/273 (1%)
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGS--LPDSEKVGKIISW 276
V + GC+ N +Y ++ L A + + M + G PD +I+
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
F K G +A+ Y ++ + P + +I++LC+ K A+++L
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDK-AMEVLTSMVKNGVMP 267
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ ++S++ C A L KM S+G P +NS++ K G T A +M
Sbjct: 268 NCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMF 327
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
M RGLKP++ TY L+ GYA G + E +L+ +N + + LI Y K
Sbjct: 328 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQ 387
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ D A+ + ++M+ G+ P+ Y +I LC
Sbjct: 388 GKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC 420
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 116/471 (24%), Positives = 193/471 (40%), Gaps = 51/471 (10%)
Query: 90 ESKEEEAYEI-------DGDKLENVLSLLQSSVDGYL-ESSLDSFELDLHEDFVLKVLET 141
E++ +EA E+ GD +V+S + ++G+ E LD HE +L
Sbjct: 175 ENRSQEALELLQMMPDDGGDCPPDVVSY-TTVINGFFKEGDLDKAYGTYHEMLDRGILP- 232
Query: 142 PLVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVL-TVEIL 200
N+V + S ++ AL KA K + L +VK GV+
Sbjct: 233 ------NVVTY-----SSIIAALCKA---QAMDKAMEVLTSMVK------NGVMPNCRTY 272
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N ++ + G+ K A K G + TY ++ L + A + + M +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ G ++ + G E H + L ++P V + LI + ++ + +
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392
Query: 321 LALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
L FS + R+ + P + +VI LC+ V A +MI E PGN V+
Sbjct: 393 AMLV----FS-KMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVY 447
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
NS+I + A E++ M RG+ D + ++ + G++ E+ ++ + +
Sbjct: 448 NSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVR 507
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ +TY TLI GYC + D A KLL M VG++P+ YN LI C K
Sbjct: 508 IGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC-KISRME 566
Query: 497 TAEKLLEDMRLKGLHLNGITRALI----------RAVKELEEDAIENGEAL 537
A L +M G+ + IT +I A KEL E+G L
Sbjct: 567 DALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQL 617
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 115/293 (39%), Gaps = 15/293 (5%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I + K G+ + A F + D Y I +L +D A + +M++ G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC---QEDETV 319
D+ II CK G+ E+ ++ L + P + LI C + DE
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534
Query: 320 KLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
KL M+ +KP ++++I C++ + A L +M S G P
Sbjct: 535 KLLASMV--------SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIIT 586
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N ++ + A E+ + G + ++ TY ++ G +EA +
Sbjct: 587 YNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 646
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+L T++ +I K+ D A L + G+ P+V Y+ + ++L
Sbjct: 647 LTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENL 699
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 102/256 (39%), Gaps = 11/256 (4%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEK--EKGV-LTVEILNELIALFSKLGKGKAA 216
V ++L+ ++C ++ WD KE+ + ++G+ L N +I K G+ +
Sbjct: 446 VYNSLIHSLC-------IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES 498
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
++F+ G + TY I+ D A + M+ G PD +I+
Sbjct: 499 EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLING 558
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
+CK + ++A V++ + P ++ L Q T A ++ + +
Sbjct: 559 YCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA-AKELYVGITESGTQL 617
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ ++ ++ LC+ A + + FN +I A K G A ++
Sbjct: 618 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLF 677
Query: 397 KLMRSRGLKPDVYTYT 412
+ + GL PDV TY+
Sbjct: 678 AALSANGLVPDVRTYS 693
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 142/301 (47%), Gaps = 9/301 (2%)
Query: 225 DYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAK 284
D G TY I+ R+ + A+ + ++M+ G + +++ CK GK +
Sbjct: 313 DVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKME 372
Query: 285 EAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSV 344
+A + EK + P + LI C+ + A ++LD+ + +S +
Sbjct: 373 KALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMAR-AFELLDEMKKRKLAPTVLTYSVI 431
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
I LCR ++ G +L +M+ G P V+ ++++A++K G + + +L+ MR +G+
Sbjct: 432 INGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGI 491
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
PDV+ Y L+ G+ +MEEA L E + R + TY I GY K E + A +
Sbjct: 492 LPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADR 551
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLC--------LKALDWRTAEKLLEDMRLKGLHLNGIT 516
NEM GV PNV Y LI+ C + + ++L+D++ + ++G++
Sbjct: 552 YFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLS 611
Query: 517 R 517
R
Sbjct: 612 R 612
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 147/314 (46%), Gaps = 2/314 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I+ K+G K A V + G+ GC N TY I L R ++ D A + M++ G
Sbjct: 221 MISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKG 280
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+PD +I+ FC +++EA ++ + + P LI ++ + ++ A
Sbjct: 281 LVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGD-IEQA 339
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+ D+ + + +++++ +C+ + A ++ +M+ +G P + ++ +I
Sbjct: 340 FRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEG 399
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ + +M A E+L M+ R L P V TY+ +++G G ++ IL E N + +
Sbjct: 400 HCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPN 459
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
V Y TL+ + K + + +L M++ G+ P+V YN LI C KA A L
Sbjct: 460 AVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFC-KAKRMEEARTYL 518
Query: 503 EDMRLKGLHLNGIT 516
+M + L N T
Sbjct: 519 MEMLERRLRPNAHT 532
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 171/413 (41%), Gaps = 40/413 (9%)
Query: 159 GVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFE 218
G+ AL++ C E ++++ + + + V+ + LI S+ GK AF
Sbjct: 566 GIYTALIEGHCKEGNVTEAFSVFRFIL----SRRVLQDVQTYSVLIHGLSRNGKMHEAFG 621
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+F++ + G + N TY I ++ D A + E+M G PD +I C
Sbjct: 622 IFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLC 681
Query: 279 KGG--------------------------------KAKEAHVVYTLAREK--KMYPPQSV 304
K G K+K + L E + PP +
Sbjct: 682 KAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAF 741
Query: 305 VAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM 364
+ +I + C ++E + ALD+ + + + F+++I C+ + A LL +M
Sbjct: 742 IYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVS-FNTLIEGYCKSGKLQEANHLLEEM 800
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
I + P + + S+I KAG M A + M+ R + P TYT L+ GY N G M
Sbjct: 801 IEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNM 860
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
E + E +TY+ +I YC+ A KL +E+ G+ +V Y+ L
Sbjct: 861 SEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDAL 920
Query: 485 IQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIENGEAL 537
IQ+LC K ++ KLL ++ G L T ++I ++ + E E L
Sbjct: 921 IQALCKKE-EFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVL 972
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 122/268 (45%), Gaps = 8/268 (2%)
Query: 252 WSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISS 311
W V + M LPD +IS CK G K+A V EK P +I
Sbjct: 200 WKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGG 259
Query: 312 LCQE---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
LC+ DE ++L M+D + + + +I C K AK +L +MI G
Sbjct: 260 LCRARLLDEAIELKRSMVD----KGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVG 315
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P +N++I + + GD+ A + M + G++ ++ + L++G G+ME+A
Sbjct: 316 LKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKAL 375
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
EI+ E + TY LI G+C+ + A +LL+EMK + P V Y+ +I L
Sbjct: 376 EIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGL 435
Query: 489 CLKALDWRTAEKLLEDMRLKGLHLNGIT 516
C + + + +L +M + GL N +
Sbjct: 436 C-RCGNLQGTNAILREMVMNGLKPNAVV 462
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 141/325 (43%), Gaps = 4/325 (1%)
Query: 193 GVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWA 251
GVL V I LI K G AF VF + + +TY I LSR A
Sbjct: 560 GVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEA 619
Query: 252 WSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISS 311
+ + ++ E G LP++ +IS CK G +A + K + P LI
Sbjct: 620 FGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDG 679
Query: 312 LCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
LC+ E ++ A ++ DD G +++++ C+ K+ A LL +M+ G PP
Sbjct: 680 LCKAGE-IERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPP 738
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
++N +++ K A+++ + M +G V ++ L+ GY G+++EA +L
Sbjct: 739 DAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEANHLL 797
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
E + + VTY +LI CK A +L EM++ V P Y L+
Sbjct: 798 EEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGY-HN 856
Query: 492 ALDWRTAEKLLEDMRLKGLHLNGIT 516
+ L E+M KG+ + +T
Sbjct: 857 IGNMSEVSALFEEMVAKGIEPDKMT 881
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 139/312 (44%), Gaps = 2/312 (0%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+ L+ +K G+ + + + + + G + + Y I + K + A + +M
Sbjct: 462 VYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEM 521
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+E P++ G I + K G+ + A + + P + LI C+E
Sbjct: 522 LERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNV 581
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+ A + ++ +S +I L R +H A + S++ +G P +NS
Sbjct: 582 TE-AFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNS 640
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+IS K G++ A ++L+ M +G+ PD+ TY L+ G G++E A + ++ +
Sbjct: 641 LISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRG 700
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
+ VTY ++ GYCK + A +LL EM GV P+ YN +I + C K + A
Sbjct: 701 LTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYN-VILNFCCKEEKFEKA 759
Query: 499 EKLLEDMRLKGL 510
L ++M KG
Sbjct: 760 LDLFQEMLEKGF 771
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 114/276 (41%), Gaps = 12/276 (4%)
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
AAF++ + G + Y + + + F+ A + ++M+E G + +I
Sbjct: 723 AAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG-FASTVSFNTLI 781
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED---ETVKLALDMLDDFSG 331
+CK GK +EA+ + EK+ P LI C+ E +L L+M
Sbjct: 782 EGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEM------ 835
Query: 332 EARKY--AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
+ R K ++S++ + ++ L +M+++G P + +I AY + G++
Sbjct: 836 QERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNV 895
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
A ++ + +G+ V Y L+ + E ++LNE ++ RL T +
Sbjct: 896 MEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVI 955
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
RG+ D A ++L M G N L+
Sbjct: 956 ARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLV 991
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 66/123 (53%), Gaps = 2/123 (1%)
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M + + PDVYTYT ++S + G +++A +L E + + VTY+ +I G C+
Sbjct: 206 MCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARL 265
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-R 517
D A++L M D G+ P++ Y+ LI C++ R A+ +L +M GL IT
Sbjct: 266 LDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRS-REAKLMLLEMIDVGLKPEPITYN 324
Query: 518 ALI 520
ALI
Sbjct: 325 ALI 327
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 104/243 (42%), Gaps = 1/243 (0%)
Query: 191 EKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDW 250
EKG + N LI + K GK + A + + + + N TY I+ + +
Sbjct: 768 EKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGE 827
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A + +M E +P ++ ++ + G E ++ K + P + +I
Sbjct: 828 AKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMID 887
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
+ C+E ++ A + D+ + ++ + ++I++LC+ ++ LL+++ G
Sbjct: 888 AYCREGNVME-ACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFR 946
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
G + + + AG+M A E+L+ M G + + L+ G NG E++ +
Sbjct: 947 LGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNL 1006
Query: 431 LNE 433
L +
Sbjct: 1007 LKQ 1009
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 151/321 (47%), Gaps = 10/321 (3%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N LI FS+LG +F VF G N T I+ L + A +K++
Sbjct: 94 FNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVV 153
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
G + G +I+ CK G+ A + K + P + +I S+C+ V
Sbjct: 154 ALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCK----V 209
Query: 320 KLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
KL + D +S K I P +S++I C + ++ A L +KMISE P
Sbjct: 210 KLVNEAFDLYSEMVSK-GISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYT 268
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
F+ ++ + K G + A +L +M +G+KPDV TY LM GY Q+ +A I N
Sbjct: 269 FSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMA 328
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+ + +Y+ +I G+CK+++ D A+ L EM + P+V YN LI LC K+
Sbjct: 329 QGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLC-KSGKI 387
Query: 496 RTAEKLLEDMRLKGLHLNGIT 516
A KL+++M +G+ + IT
Sbjct: 388 SYALKLVDEMHDRGVPHDKIT 408
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 143/285 (50%), Gaps = 4/285 (1%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G ++ T+ I S+ +++SV +++ G P++ + +I C G+ +A
Sbjct: 86 GIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQA 145
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
+ + + LI+ LC+ +T AL +L G+ + + ++++I
Sbjct: 146 LHFHDKVVALGFHLNKVCYGTLINGLCKVGQT-SAALQLLRRVDGKLVQPNVVMYNTIID 204
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
S+C++K V+ A L S+M+S+G P ++++IS + G + A+ + M S + P
Sbjct: 205 SMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINP 264
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
DVYT++ L+ G+ G+++EA +L K + VTY +L+ GYC +++ + A +
Sbjct: 265 DVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIF 324
Query: 467 NEMKDVGVQPNVDEYNKLIQSLC-LKALDWRTAEKLLEDMRLKGL 510
N M GV NV YN +I C +K +D A L ++M K +
Sbjct: 325 NTMAQGGVTANVQSYNIMINGFCKIKKVD--EAMNLFKEMHCKNI 367
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 146/308 (47%), Gaps = 2/308 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI+ F LGK A +FNK + T+ ++ + A +V M++ G
Sbjct: 237 LISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQG 296
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD ++ +C + +A ++ + + +I+ C+ + V A
Sbjct: 297 IKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKK-VDEA 355
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+++ + + + ++S+I LC+ + A L+ +M G P +NS++ A
Sbjct: 356 MNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDA 415
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
K + A+ +L M+ G++PD+YTYT L+ G GG++++A I + ++
Sbjct: 416 LCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNIT 475
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
TY +I+G+C + FD AL LL++M+D G PN Y +I SL K + AEKLL
Sbjct: 476 VYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKD-ENDMAEKLL 534
Query: 503 EDMRLKGL 510
+M +GL
Sbjct: 535 REMIARGL 542
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 86/181 (47%), Gaps = 2/181 (1%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F ++ SL ++ A +L +M G FN +I+ +S+ G + + +
Sbjct: 59 FGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANIL 118
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+G +P+ T T L+ G GQ+ +A ++ L+ V Y TLI G CK+ +
Sbjct: 119 KKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTS 178
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RAL 519
AL+LL + VQPNV YN +I S+C K A L +M KG+ + +T AL
Sbjct: 179 AALQLLRRVDGKLVQPNVVMYNTIIDSMC-KVKLVNEAFDLYSEMVSKGISPDVVTYSAL 237
Query: 520 I 520
I
Sbjct: 238 I 238
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 58/137 (42%)
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT 412
D H + +++++ P P F ++ + K A+ + + M G+ D+ T+
Sbjct: 36 DEHSLVSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFN 95
Query: 413 GLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
L++ ++ G + + K + +T TLI+G C + AL +++ +
Sbjct: 96 ILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVAL 155
Query: 473 GVQPNVDEYNKLIQSLC 489
G N Y LI LC
Sbjct: 156 GFHLNKVCYGTLINGLC 172
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 155/313 (49%), Gaps = 2/313 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I F K G A ++FN+ G + TY + AL + + D A ++ +M++
Sbjct: 220 NTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVD 279
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G LPD+ +I + G+ KEA V + + P + L++SLC+ + +K
Sbjct: 280 KGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGK-IK 338
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A D+ D + + +K I + ++ + L + M+S+G P + +FN +I
Sbjct: 339 DARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLI 398
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
AY+K G + A + MR +G++PDV TY+ +++ G+M++A E N+
Sbjct: 399 KAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVA 458
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
S TYH LI+G+C + A L+ +M + G++P++ +N +I +LC K A+
Sbjct: 459 PSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLC-KLGRVMDAQN 517
Query: 501 LLEDMRLKGLHLN 513
+ + GLH N
Sbjct: 518 IFDFTISIGLHPN 530
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 138/301 (45%), Gaps = 8/301 (2%)
Query: 192 KGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDW 250
+G+L V LN L+A K GK K A +VF+ G + +Y + + +
Sbjct: 315 QGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVD 374
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
+ M+ G PDS +I + K G A +++ RE+ + P + +I+
Sbjct: 375 LTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIA 434
Query: 311 SLCQ---EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
+LC+ D+ V+ M+D + +I + +I+ C D+ AK L+ +M+++
Sbjct: 435 ALCRIGKMDDAVEKFNQMID----QGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNK 490
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P FN +I+ K G + A + S GL P+V Y LM GY G+ME A
Sbjct: 491 GMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENA 550
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
+ + + + V Y TL+ GYCK+ D L L E+ G++P+ YN ++
Sbjct: 551 LRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHG 610
Query: 488 L 488
L
Sbjct: 611 L 611
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 129/290 (44%), Gaps = 8/290 (2%)
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
G C+ N Y I+ + + A + +M++ G PD +++ CK
Sbjct: 208 GGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAM 267
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLI---SSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
+A + +K + P LI SS Q E V+++ M + + +
Sbjct: 268 DKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKM----TSQGILPDVVT 323
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+S++ SLC+ + A+ + M +G + +++ Y+ G + E+ LM
Sbjct: 324 LNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLML 383
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
S G+ PD + + L+ YA G ++ A I NE ++ VTY T+I C++ + D
Sbjct: 384 SDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMD 443
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
A++ N+M D GV P++ Y+ LIQ C D A+ L+ M KG+
Sbjct: 444 DAVEKFNQMIDQGVAPSISTYHFLIQGFCTHG-DLLKAKDLVLQMMNKGM 492
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 147/330 (44%), Gaps = 9/330 (2%)
Query: 161 VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA--FE 218
+++L+ ++C K+ ++D + G+K +I + I L KG E
Sbjct: 324 LNSLMASLCKHGKIKDARDVFDSMAMKGQK------TDIFSYKIMLNGYATKGCLVDLTE 377
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+FN G + + I+A ++ + D A + +M E G PD +I+ C
Sbjct: 378 LFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALC 437
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
+ GK +A + ++ + P S FLI C + +K A D++ + + I
Sbjct: 438 RIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLK-AKDLVLQMMNKGMRPDI 496
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
F+ +I +LC++ V A+ + IS G P V+N+++ Y G M A+ + +
Sbjct: 497 GCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDV 556
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M S G++P+V Y L++GY G+++E + E + S Y+ ++ G +
Sbjct: 557 MVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGR 616
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
A +EM + G+ + Y+ ++ L
Sbjct: 617 TVPAKVKFHEMTESGIAMDRYTYSIVLGGL 646
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 130/300 (43%), Gaps = 2/300 (0%)
Query: 190 KEKGV-LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
+E+GV V + +IA ++GK A E FN+ D G + TY+F I+
Sbjct: 418 REQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDL 477
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
A + +M+ G PD II+ CK G+ +A ++ ++P V L
Sbjct: 478 LKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTL 537
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
+ C + ++ AL + D + + + +++ C++ + +L +++ +G
Sbjct: 538 MDGYCLVGK-MENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKG 596
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P ++N ++ +AG PA M G+ D YTY+ ++ G +EA
Sbjct: 597 IKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAI 656
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ E + ++ T + +I G ++ + A L + G+ P+V Y+ ++ +L
Sbjct: 657 LLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNL 716
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 118/268 (44%), Gaps = 14/268 (5%)
Query: 233 ETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTL 292
TY ++ +R + ++++TG D+ + ++ C+ + EA + L
Sbjct: 109 HTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDIL-L 167
Query: 293 AREKKMYPPQSVVAFLI--SSLC------QEDETVKLALDMLDDFSGEARKYAIKPFSSV 344
R + V ++ I SLC Q DE ++ M+ + A+ +++V
Sbjct: 168 HRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLR----MMAEGGAVCLPNAVA-YNTV 222
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
I + DV+ A L ++M+ G P + +N V++A KA M A +L+ M +G+
Sbjct: 223 IDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGV 282
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
PD +TY L+ GY++ GQ +EA + + VT ++L+ CK + A
Sbjct: 283 LPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARD 342
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
+ + M G + ++ Y ++ K
Sbjct: 343 VFDSMAMKGQKTDIFSYKIMLNGYATKG 370
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 152/327 (46%), Gaps = 5/327 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
++++ CSS KE + G E V+T N L+ K G+ A ++F+
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDG-VEPDVVTY---NSLMDYLCKNGRCTEARKMFD 328
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G TY ++ + + + + M+ G P+ +I + K G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
K +A +V++ R++ + P +I LC+ V+ A+ + E +
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGR-VEDAMRYFEQMIDERLSPGNIVY 447
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+S+I SLC AK L+ +M+ G FNS+I ++ K G + + ++ LM
Sbjct: 448 NSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVR 507
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+KPD+ TY+ L+ GY G+M+EA ++L + VTY+TLI GYCK+ +
Sbjct: 508 IGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMED 567
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSL 488
AL L EM+ GV P++ YN ++Q L
Sbjct: 568 ALVLFREMESSGVSPDIITYNIILQGL 594
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 143/304 (47%), Gaps = 15/304 (4%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G N + I A +++ D A V KM + G PD+ G +I CK G+ ++A
Sbjct: 369 GIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDA 428
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLC---QEDETVKLALDMLDDFSGEARKYAIKP--F 341
+ ++++ P V LI SLC + D+ +L L+MLD R + F
Sbjct: 429 MRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLD------RGICLDTIFF 482
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+S+I S C+ V ++ L M+ G P ++++I Y AG M A ++L M S
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 542
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+KPD TY L++GY +ME+A + E + + +TY+ +++G +
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 602
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD---WRTAEKL-LEDMRLKGLHLNGITR 517
A +L + + G Q + YN ++ LC L R + L L D++L+ N +
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 662
Query: 518 ALIR 521
AL++
Sbjct: 663 ALLK 666
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 120/273 (43%), Gaps = 3/273 (1%)
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGS--LPDSEKVGKIISW 276
V + GC+ N +Y ++ L A + + M + G PD +I+
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
F K G +A+ Y ++ + P + +I++LC+ K A+++L
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDK-AMEVLTSMVKNGVMP 267
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ ++S++ C A L KM S+G P +NS++ K G T A +M
Sbjct: 268 NCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMF 327
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
M RGLKP++ TY L+ GYA G + E +L+ +N + + LI Y K
Sbjct: 328 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQ 387
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ D A+ + ++M+ G+ P+ Y +I LC
Sbjct: 388 GKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC 420
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 116/471 (24%), Positives = 193/471 (40%), Gaps = 51/471 (10%)
Query: 90 ESKEEEAYEI-------DGDKLENVLSLLQSSVDGYL-ESSLDSFELDLHEDFVLKVLET 141
E++ +EA E+ GD +V+S + ++G+ E LD HE +L
Sbjct: 175 ENRSQEALELLQMMPDDGGDCPPDVVSY-TTVINGFFKEGDLDKAYGTYHEMLDRGILP- 232
Query: 142 PLVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVL-TVEIL 200
N+V + S ++ AL KA K + L +VK GV+
Sbjct: 233 ------NVVTY-----SSIIAALCKA---QAMDKAMEVLTSMVK------NGVMPNCRTY 272
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N ++ + G+ K A K G + TY ++ L + A + + M +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ G ++ + G E H + L ++P V + LI + ++ + +
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392
Query: 321 LALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
L FS + R+ + P + +VI LC+ V A +MI E PGN V+
Sbjct: 393 AMLV----FS-KMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVY 447
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
NS+I + A E++ M RG+ D + ++ + G++ E+ ++ + +
Sbjct: 448 NSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVR 507
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ +TY TLI GYC + D A KLL M VG++P+ YN LI C K
Sbjct: 508 IGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC-KISRME 566
Query: 497 TAEKLLEDMRLKGLHLNGITRALI----------RAVKELEEDAIENGEAL 537
A L +M G+ + IT +I A KEL E+G L
Sbjct: 567 DALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQL 617
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 115/293 (39%), Gaps = 15/293 (5%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I + K G+ + A F + D Y I +L +D A + +M++ G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC---QEDETV 319
D+ II CK G+ E+ ++ L + P + LI C + DE
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534
Query: 320 KLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
KL M+ +KP ++++I C++ + A L +M S G P
Sbjct: 535 KLLASMV--------SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIIT 586
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N ++ + A E+ + G + ++ TY ++ G +EA +
Sbjct: 587 YNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 646
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+L T++ +I K+ D A L + G+ P+V Y+ + ++L
Sbjct: 647 LTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENL 699
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 102/256 (39%), Gaps = 11/256 (4%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEK--EKGV-LTVEILNELIALFSKLGKGKAA 216
V ++L+ ++C ++ WD KE+ + ++G+ L N +I K G+ +
Sbjct: 446 VYNSLIHSLC-------IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES 498
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
++F+ G + TY I+ D A + M+ G PD +I+
Sbjct: 499 EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLING 558
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
+CK + ++A V++ + P ++ L Q T A ++ + +
Sbjct: 559 YCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA-AKELYVGITESGTQL 617
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ ++ ++ LC+ A + + FN +I A K G A ++
Sbjct: 618 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLF 677
Query: 397 KLMRSRGLKPDVYTYT 412
+ + GL PDV TY+
Sbjct: 678 AALSANGLVPDVRTYS 693
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 142/297 (47%), Gaps = 4/297 (1%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N ++ K G AFE ++ GCVA TY + L +++ + M+
Sbjct: 255 NVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLV 314
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ +I+ C+ GK EA V + +EK + P LIS+LC+E + V
Sbjct: 315 KGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGK-VD 373
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
LA++ LDD I ++S++ SLC+ + A + K+ G PP +N++
Sbjct: 374 LAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLF 433
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA-KKNHS 439
A +GD A+ M+ M S G+ PD TY L+S G +++A E+L + +
Sbjct: 434 GALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKC 493
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ + ++Y+T++ G CK++ A+++L M + G PN Y LIQ + WR
Sbjct: 494 QPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAG--WR 548
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 138/318 (43%), Gaps = 8/318 (2%)
Query: 184 VKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALS 243
V EI EK G V N +I+ F K + A +V ++ G + TY I
Sbjct: 134 VMEILEKH-GKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFC 192
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS 303
R D A V +++++ P +I G EA + + + P +
Sbjct: 193 GRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRY 252
Query: 304 VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSK 363
+++ +C+E + A + L S + ++ ++R L + L+S
Sbjct: 253 TYNVVVNGMCKEG-MLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSD 311
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
M+ +G P ++++I+A + G + A +LK+M+ + L PD Y+Y L+S G+
Sbjct: 312 MLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGK 371
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
++ A E L++ ++Y++++ CK D AL + ++ +VG PN YN
Sbjct: 372 VDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNT 431
Query: 484 LIQSLCLKALDWRTAEKL 501
L +L W + +K+
Sbjct: 432 LFGAL------WSSGDKI 443
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 143/349 (40%), Gaps = 16/349 (4%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+A++ C + + D +K+ G E V+T IL I F G+ A V +
Sbjct: 150 NAVISGFCKADRVDHASKVLDRMKKRG-FEPDVVTYNIL---IGNFCGRGRLDLALRVMD 205
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ C TY IEA + D A + ++M+ G PD +++ CK G
Sbjct: 206 QLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEG 265
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE---TVKLALDMLDDFSGEARKYAI 338
A + + S L+ L E + KL DML +
Sbjct: 266 MLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDML------VKGCEP 319
Query: 339 KP--FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
P +S++I +LCR + AK +L M + P ++ +ISA + G + A+E L
Sbjct: 320 NPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFL 379
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
M S G PD+ +Y +++ G +EA I + + + +Y+TL
Sbjct: 380 DDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSS 439
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
+ AL ++ EM G+ P+ YN LI LC L + E LL DM
Sbjct: 440 GDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIE-LLVDM 487
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 2/184 (1%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+++VI C+ V A +L +M G P +N +I + G + A+ ++ +
Sbjct: 149 YNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLL 208
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
KP V TYT L+ G ++EA ++L+E R TY+ ++ G CK D
Sbjct: 209 KDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLD 268
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRA-L 519
A + L+ + G V YN L++ L L W EKL+ DM +KG N IT + L
Sbjct: 269 RAFEFLSRISKNGCVAGVSTYNILLRDL-LNEGKWEYGEKLMSDMLVKGCEPNPITYSTL 327
Query: 520 IRAV 523
I A+
Sbjct: 328 ITAL 331
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 72/132 (54%), Gaps = 4/132 (3%)
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
F ++ K+ ++ L+ M +RG KPDV T L+ G+ N ++E+A +++ E
Sbjct: 80 FMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVM-EIL 138
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA--- 492
+ H + Y+ +I G+CK + D A K+L+ MK G +P+V YN LI + C +
Sbjct: 139 EKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLD 198
Query: 493 LDWRTAEKLLED 504
L R ++LL+D
Sbjct: 199 LALRVMDQLLKD 210
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 93/231 (40%), Gaps = 2/231 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + GK A V + + +Y I AL R D A + MI G
Sbjct: 327 LITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGG 386
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
LPD I++ CK G A EA ++ E P L +L + ++ A
Sbjct: 387 HLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIR-A 445
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI-SEGPPPGNAVFNSVIS 381
L M+ + ++S+I LCR V A LL M SE P +N+V+
Sbjct: 446 LGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLL 505
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
K + A+E+L M + G P+ TYT L+ G G +A E+ N
Sbjct: 506 GLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMELAN 556
>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 465
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 140/281 (49%), Gaps = 8/281 (2%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
I + + +A+SV K+++ G P++ +I C G+ +A +
Sbjct: 129 INCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGF 188
Query: 299 YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
Q LI LC+ ET + ALD+L G+ + + +S++I +C+ K V+ A
Sbjct: 189 QFNQISYGTLIDGLCKVGET-RAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAF 247
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
L S+M+S+G P ++++IS + G + A+++ M S +KPDVYT+ L+ +
Sbjct: 248 DLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVF 307
Query: 419 ANGGQMEEACEILNEAKKNHSRLSP---VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
G++ A ++++E H R P VTY +++ CK D A+ LL ++KD G++
Sbjct: 308 CKSGKISYALKLVDEM---HDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIR 364
Query: 476 PNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
PN+ Y LI LC A + ED+ +KG + +T
Sbjct: 365 PNMHTYTILIDGLCTSG-KLEDARNIFEDLLVKGYDITVVT 404
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 144/335 (42%), Gaps = 35/335 (10%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI F +LG AF VF K G N T+ I+ L + A + +K++
Sbjct: 126 NILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVA 185
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET-- 318
G + G +I CK G+ + A + K + P + + +I +C++
Sbjct: 186 LGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVND 245
Query: 319 --------------------------------VKLALDMLDDFSGEARKYAIKPFSSVIR 346
+K A+D+ + E K + F+ ++
Sbjct: 246 AFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVD 305
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
C+ + A L+ +M G PP ++S++ A K + A+ +L ++ +G++P
Sbjct: 306 VFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRP 365
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
+++TYT L+ G G++E+A I + ++ VTY + G+CK FD A LL
Sbjct: 366 NMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALL 425
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
++M++ G P+ Y +LI+ K + AEKL
Sbjct: 426 SKMEENGCIPDAKTY-ELIKLSLFKKGENDMAEKL 459
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 2/181 (1%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F+ ++ SL + K H L KM G P N +I+ + + G + A + +
Sbjct: 90 FNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKIL 149
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G P+ T+T L+ G GQ+ +A ++ + + ++Y TLI G CK+ E
Sbjct: 150 KMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETR 209
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RAL 519
AL LL + VQPNV Y+ +I +C K A L +M KG+ N +T AL
Sbjct: 210 AALDLLRRVDGKLVQPNVVMYSTIIDGMC-KDKHVNDAFDLYSEMVSKGISPNVVTYSAL 268
Query: 520 I 520
I
Sbjct: 269 I 269
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 85/188 (45%), Gaps = 1/188 (0%)
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
+ K + P+SS + DV A +L + ++ + P P FN ++ + K+
Sbjct: 47 SSKINLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTV 106
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
+ + K M RG+KP++ L++ + G + A + + K + +T+ TLI+G
Sbjct: 107 LYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKG 166
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
C + AL +++ +G Q N Y LI LC K + R A LL + K +
Sbjct: 167 LCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLC-KVGETRAALDLLRRVDGKLVQP 225
Query: 513 NGITRALI 520
N + + I
Sbjct: 226 NVVMYSTI 233
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 137/308 (44%), Gaps = 2/308 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI ++G+ +F K + C TY + AL A ++ +M E G
Sbjct: 45 LIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERG 104
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P+ +I+ CK K +E + EK + P LI C+E V+ A
Sbjct: 105 CEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEG-MVEAA 163
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++LD + + ++ +I CR K+VH A LLSKM+ P +NS+I
Sbjct: 164 QEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHG 223
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
K G + A +L LM G+ PD +TY+ + G++EEA + N K+ + +
Sbjct: 224 QCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKAN 283
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
V Y LI GYCK + D A LL+ M PN YN LI LC K + A L+
Sbjct: 284 EVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLC-KERKVQEALLLM 342
Query: 503 EDMRLKGL 510
E M KGL
Sbjct: 343 ESMIQKGL 350
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 145/351 (41%), Gaps = 38/351 (10%)
Query: 205 ALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL 264
ALF G+ A +F++ + GC N TY I A+ + + + ++M+E G +
Sbjct: 83 ALFES-GRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLV 141
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALD 324
P +I +CK G + A + L P + LI C++ + V A+
Sbjct: 142 PSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRK-KNVHRAMA 200
Query: 325 MLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP------------- 371
+L ++ ++S+I C++ + A LL+ M G P
Sbjct: 201 LLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLC 260
Query: 372 -------GNAVFNSV---------------ISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
N +FNS+ I Y KAG M A +L M + P+
Sbjct: 261 KKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSS 320
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
TY L+ G +++EA ++ + + + TY LI K +FD A ++L++M
Sbjct: 321 TYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQM 380
Query: 470 KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
G QP+V Y I + C + + + AE ++ M +G+ + +T L+
Sbjct: 381 VSSGYQPDVYIYTAFIHAFCTRG-NIKEAEDMMSMMFERGVMPDALTYTLV 430
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 126/288 (43%), Gaps = 1/288 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
NELI F + A + +K + + TY I + D A+ + M E
Sbjct: 183 NELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNE 242
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G +PD I CK G+ +EA+V++ +EK + + + LI C+ + +
Sbjct: 243 NGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGK-MD 301
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A +LD E ++++I LC+ + V A L+ MI +G + +I
Sbjct: 302 DANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILI 361
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
A K GD A +L M S G +PDVY YT + + G ++EA ++++ +
Sbjct: 362 VAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVM 421
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+TY +I Y L + A +L M D G P+ Y+ LI+ L
Sbjct: 422 PDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHL 469
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 128/316 (40%), Gaps = 30/316 (9%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
I K G+ + A +FN + G AN+ Y I+ + D A S+ ++M+
Sbjct: 255 FIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTED 314
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
LP+S +I CK K +EA ++ +K + LI ++ +E + A
Sbjct: 315 CLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGD-FDYA 373
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+LD + + +++ I + C ++ A+ ++S M G P + VI A
Sbjct: 374 HRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDA 433
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG---------YANGG----------- 422
Y G + PA ++LK M G P +TY+ L+ Y N
Sbjct: 434 YGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFA 493
Query: 423 ---------QMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
+ E A E+ + ++ + TY LI G CK+ A KL + M + G
Sbjct: 494 DVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERG 553
Query: 474 VQPNVDEYNKLIQSLC 489
V P+ YN L+ C
Sbjct: 554 VSPSEAIYNSLLNCCC 569
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 74/151 (49%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++++I LC + V + KM + P + ++ A ++G A+ + MR
Sbjct: 42 YTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMR 101
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
RG +P+++TYT +++ ++EE IL+E + S TY+ LI GYCK +
Sbjct: 102 ERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVE 161
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
A ++L+ M PN YN+LI C K
Sbjct: 162 AAQEILDLMHSNSCNPNERTYNELICGFCRK 192
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 101/488 (20%), Positives = 172/488 (35%), Gaps = 110/488 (22%)
Query: 103 KLENVLSLLQSSVDGYLESSLDSFELDLHEDFVLKVLETPL----VLGENLVCFFKWVTS 158
+ ++LL ++ L S+ ++ +H + L++ ++ EN V +W S
Sbjct: 194 NVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYS 253
Query: 159 GVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFE 218
+D L C +E L++ +KE G K V I LI + K GK A
Sbjct: 254 VFIDTL----CKKGRIEEANVLFNSLKEKGIKANEV----IYTALIDGYCKAGKMDDANS 305
Query: 219 VFNKFGDYGCVANQETYYFTIEALSR-RKI------------------------------ 247
+ ++ C+ N TY I+ L + RK+
Sbjct: 306 LLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAML 365
Query: 248 ----FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH---------------V 288
FD+A + ++M+ +G PD I FC G KEA +
Sbjct: 366 KEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDAL 425
Query: 289 VYTLARE---------------KKMY-----PPQSVVAFLISSLCQEDETVKL------- 321
YTL + K+M+ P + LI L +E+ T K
Sbjct: 426 TYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCD 485
Query: 322 ---------------------ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTL 360
AL++ + I ++ +I LC++ + A+ L
Sbjct: 486 SIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKL 545
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
M G P A++NS+++ + G A+ ++ M G P + + L G
Sbjct: 546 FDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYE 605
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
G E+A + + + V + LI G K D +LL M+ G Q +
Sbjct: 606 EGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQT 665
Query: 481 YNKLIQSL 488
Y LI+ L
Sbjct: 666 YRMLIEGL 673
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 73/155 (47%), Gaps = 1/155 (0%)
Query: 352 KDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTY 411
DV+ A ++ + M +G + ++I + G + + + K MR P V TY
Sbjct: 18 NDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTY 77
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
T ++ G+ EA + +E ++ + TY +I CK + + ++L+EM +
Sbjct: 78 TVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVE 137
Query: 472 VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
G+ P+V YN LI C + + A+++L+ M
Sbjct: 138 KGLVPSVPTYNALIDGYCKEGM-VEAAQEILDLMH 171
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 128/262 (48%)
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH 287
C + TY + AL + FD A + +MI G PD+ +I CK G ++A
Sbjct: 74 CAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAF 133
Query: 288 VVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRS 347
V ++ M + +I LC + +V+LA +L + + F+ VI
Sbjct: 134 RVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVING 193
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
C+ KD+ A LL MI +G P F +I+ KA + A ++L+ M + G P+
Sbjct: 194 FCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPN 253
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
V TY+ +++G GQ+++A E+ ++ + + VT++ LI G CK + + A +L +
Sbjct: 254 VVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYH 313
Query: 468 EMKDVGVQPNVDEYNKLIQSLC 489
M++ G P++ YN LI LC
Sbjct: 314 RMRETGCAPDIITYNSLIDGLC 335
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 162/413 (39%), Gaps = 39/413 (9%)
Query: 141 TPLVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEIL 200
TP VL NLV + C + Y L +++ E G V V
Sbjct: 181 TPTVLMFNLV--------------INGFCKAKDLDSAYKLLEVMIEKG----CVPNVFTF 222
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
LI K + A ++ K GC N TY I L ++ D A+ + + M
Sbjct: 223 TILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMER 282
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC---QEDE 317
P+ +I CK + +EA +Y RE P LI LC Q DE
Sbjct: 283 RNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDE 342
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
+L + + A +L RM D A + S ++ +G P A +
Sbjct: 343 AFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMAD---ACRIFSMLVDKGFSPDLATYT 399
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
S+I Y K +E+++ M S+G P V T + ++ G G E A ++ +
Sbjct: 400 SLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAAR 459
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM---KDVGVQPNVDEYNKLIQSLCLKALD 494
+ Y+ ++ G + + + AL +L ++ +D P+ + L++SLC
Sbjct: 460 GCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVG-- 517
Query: 495 WRT--AEKLLEDMRLKGL-----HLNGITRALIRAVKELEEDAIENGEALVEA 540
RT A++LL M +G NG+ L R + ++A + EA+V A
Sbjct: 518 -RTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQR--WDEATQVFEAMVSA 567
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 149/363 (41%), Gaps = 10/363 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ +C + +E L+ ++E G + N LI K + AF++F
Sbjct: 293 NILIDGLCKAKRIEEARQLYHRMRETGCAPD----IITYNSLIDGLCKSFQVDEAFQLFQ 348
Query: 222 KFGDYGC-VANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ G AN TY + A + +++ G PD +I +CK
Sbjct: 349 TIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKT 408
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
+A E + K P + ++ ++ L + + T + A+ + D +
Sbjct: 409 SRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTER-AIQLFDSMAARGCTDDALI 467
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGP---PPGNAVFNSVISAYSKAGDMTPAMEMLK 397
++ V+ + R + A +L ++I + P ++ ++++ + + G A ++L
Sbjct: 468 YNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLH 527
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M RG V +Y GL+SG + + +EA ++ T + +I C
Sbjct: 528 KMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAA 587
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITR 517
+ D A +L+ M +G P+++ N LI C K+ A KLLE+M GL N T
Sbjct: 588 KVDDAYELVQRMSKLGCCPDIETCNTLIGGYC-KSGRADLARKLLEEMTEAGLEPNDTTH 646
Query: 518 ALI 520
L+
Sbjct: 647 DLL 649
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P + +I +S AGD+ A+++L+ M+S G + + +T LM G + G++ EA E
Sbjct: 7 PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
K+ + +TY L+ CK +FD A +L EM G P+ ++ LI LC
Sbjct: 67 FRAMAKDCAP-DVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLC- 124
Query: 491 KALDWRTAEKLLEDMRLKGL 510
K A ++LED+ +G+
Sbjct: 125 KFGSEEQAFRVLEDVIQRGM 144
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 11/204 (5%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+ +IR D+ A LL +M S G V +++ AG + A+E + M
Sbjct: 12 YGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM- 70
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
++ PDV TYT L+ G+ +EA +L E VT+ TLI G CK +
Sbjct: 71 AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEE 130
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG---------LH 511
A ++L ++ G+ + + +IQ LC K A K+L + KG L
Sbjct: 131 QAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLV 190
Query: 512 LNGITRAL-IRAVKELEEDAIENG 534
+NG +A + + +L E IE G
Sbjct: 191 INGFCKAKDLDSAYKLLEVMIEKG 214
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 169/384 (44%), Gaps = 26/384 (6%)
Query: 150 VCFFKWVTSGVVD-------ALLKAICSS----------------VGKKEVYALWDIVKE 186
VCF + + SG+VD AL + + S K+ + D K+
Sbjct: 44 VCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQ 103
Query: 187 IGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRK 246
+ E + LN +I F + K A+ V K G + T+ I+ L
Sbjct: 104 L-ELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 162
Query: 247 IFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVA 306
A + ++M+E G PD I++ C+ G A + E+ + +
Sbjct: 163 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 222
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
+I SLC+ D + A+ + + + K ++ ++S++R LC+ + LL M+S
Sbjct: 223 TIIDSLCR-DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 281
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
P FN ++ + K G + A E+ K M +RG+ P++ TY LM GY ++ E
Sbjct: 282 REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE 341
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A +L+ +N VT+ +LI+GYC ++ D +K+ + G+ N Y+ L+Q
Sbjct: 342 ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 401
Query: 487 SLCLKALDWRTAEKLLEDMRLKGL 510
C ++ + AE+L ++M G+
Sbjct: 402 GFC-QSGKIKLAEELFQEMVSHGV 424
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 137/309 (44%), Gaps = 3/309 (0%)
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
AA +F + G ++ TY + L + ++ + + M+ +P+ ++
Sbjct: 236 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 295
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR 334
F K GK +EA+ +Y + + P L+ C ++ + A +MLD
Sbjct: 296 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE-ANNMLDLMVRNKC 354
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
I F+S+I+ C +K V + + G ++ ++ + ++G + A E
Sbjct: 355 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 414
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+ + M S G+ PDV TY L+ G + G++E+A EI + +K+ L V Y T+I G C
Sbjct: 415 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 474
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG 514
K + + A L + GV+PNV Y +I LC K A LL M G N
Sbjct: 475 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG-SLSEANILLRKMEEDGNAPND 533
Query: 515 IT-RALIRA 522
T LIRA
Sbjct: 534 CTYNTLIRA 542
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 92/196 (46%), Gaps = 1/196 (0%)
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
L LD + I + +I CR A ++L K++ G P FN++I
Sbjct: 96 LVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLI 155
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
G ++ A+ ++ M G +PDV TY +++G G A ++L + ++ + +
Sbjct: 156 KGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVK 215
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
TY T+I C+ D A+ L EM+ G++ +V YN L++ LC KA W
Sbjct: 216 ADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC-KAGKWNDGAL 274
Query: 501 LLEDMRLKGLHLNGIT 516
LL+DM + + N IT
Sbjct: 275 LLKDMVSREIVPNVIT 290
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 149/337 (44%), Gaps = 7/337 (2%)
Query: 154 KWVTSGVV--DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLG 211
K + S VV ++L++ +C + GK AL ++K++ +E V V N L+ +F K G
Sbjct: 247 KGIKSSVVTYNSLVRGLCKA-GKWNDGAL--LLKDMVSREI-VPNVITFNVLLDVFVKEG 302
Query: 212 KGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVG 271
K + A E++ + G N TY ++ + A ++ + M+ PD
Sbjct: 303 KLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFT 362
Query: 272 KIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSG 331
+I +C + + V+ ++ + + L+ CQ + +KLA ++ +
Sbjct: 363 SLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK-IKLAEELFQEMVS 421
Query: 332 EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
+ + ++ LC + A + + G ++ ++I K G +
Sbjct: 422 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED 481
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
A + + +G+KP+V TYT ++SG G + EA +L + +++ + + TY+TLIR
Sbjct: 482 AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 541
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ + + + KL+ EMK G + +I L
Sbjct: 542 AHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 578
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 85/189 (44%), Gaps = 6/189 (3%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
FS ++ R K + ++ G N +I+ + + A +L +
Sbjct: 81 FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM 140
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G +PD T+ L+ G G++ EA +++ +N + VTY++++ G C+ +
Sbjct: 141 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 200
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH-----LNGI 515
AL LL +M++ V+ +V Y+ +I SLC A L ++M KG+ N +
Sbjct: 201 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGC-IDAAISLFKEMETKGIKSSVVTYNSL 259
Query: 516 TRALIRAVK 524
R L +A K
Sbjct: 260 VRGLCKAGK 268
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 80/191 (41%), Gaps = 15/191 (7%)
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A L +MI P P F+ SA ++ ++ K + G+ ++YT +++
Sbjct: 62 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 121
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
+ + A +L + K T++TLI+G + A+ L++ M + G QP
Sbjct: 122 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 181
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMR--------------LKGLHLNGITRALIRA 522
+V YN ++ +C ++ D A LL M + L +G A I
Sbjct: 182 DVVTYNSIVNGIC-RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 240
Query: 523 VKELEEDAIEN 533
KE+E I++
Sbjct: 241 FKEMETKGIKS 251
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 5/145 (3%)
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
ED L +D+ + +A YA + + +R R V A+ L +MI G P
Sbjct: 680 EDAECDLMVDL--ELPTDAVHYAHR--AGRMRRPGRKMTVVTAEELHKEMIQRGIAPNTI 735
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE- 433
++S+I + K + A +ML LM ++G Y GLM G + E + ++
Sbjct: 736 TYSSLIDGFCKENRLDEANQMLDLMVTKGDSDIRYLLAGLMRKKRKGSETEGWENLPDDL 795
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEE 458
+ SR S H + GY +L++
Sbjct: 796 SCSTASRSSNFRSHFSLEGYARLKK 820
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 169/387 (43%), Gaps = 52/387 (13%)
Query: 174 KKEVYALWDIVK---EIGEKEKG--VL----------TVEILNELIALFSKLGKGKAAFE 218
K +VY+ ++K E+G +KG VL V + LI K G + +
Sbjct: 161 KLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQ 220
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+F K G+ VANQ TY I + + + EKM TG +P+ +I C
Sbjct: 221 LFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCC 280
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
GK A ++ RE+ + LI LCQE ++ A ++ + +
Sbjct: 281 NDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLE-AERLMCRMKRDGLSPNL 339
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
++++I C + ++ A +L ++M S G P A +N +I+ +S+A + +M++
Sbjct: 340 ISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVRE 399
Query: 399 MRSRGLKP-----------------------------------DVYTYTGLMSGYANGGQ 423
M +RGL P D+Y Y L+ G G
Sbjct: 400 MEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGD 459
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
M+EA ++ + H + + V Y+T+I GYCK AL+LL EM + G+ PNV YN
Sbjct: 460 MKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNS 519
Query: 484 LIQSLCLKALDWRTAEKLLEDMRLKGL 510
IQ LC K W AE LL+DM GL
Sbjct: 520 TIQILC-KDEKWTEAEVLLKDMIELGL 545
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 121/278 (43%), Gaps = 17/278 (6%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
I A R ++ + A +MI G +P S ++ K ++A V+ E K
Sbjct: 102 INAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFN---ETKG 158
Query: 299 YPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMK 352
V +F +I C+ LD + G+ + + P ++++I C+
Sbjct: 159 NVKLDVYSFGIMIKGCCEVG-----YLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNG 213
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT 412
D+ K L KM + +I+ + K G +E+ + M+ G+ P+VYTY
Sbjct: 214 DIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYN 273
Query: 413 GLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
++ N G++ A E+ +E ++ + VTY+TLI G C+ A +L+ MK
Sbjct: 274 SMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRD 333
Query: 473 GVQPNVDEYNKLIQSLC-LKALDWRTAEKLLEDMRLKG 509
G+ PN+ YN LI C + LD A L M+ G
Sbjct: 334 GLSPNLISYNTLIDGYCSIGNLD--KASSLFNQMKSSG 369
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 126/292 (43%), Gaps = 3/292 (1%)
Query: 194 VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSR-RKIFDWAW 252
V V N +I GK AFE+F++ + G N TY I L + R++ +
Sbjct: 266 VPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAER 325
Query: 253 SVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSL 312
+C +M G P+ +I +C G +A ++ + P + LI+
Sbjct: 326 LMC-RMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGF 384
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
+ + + DM+ + + ++ ++ +L R ++ A + S M G
Sbjct: 385 SEAKNSAGVT-DMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVAD 443
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
++ +I GDM A ++ K + LKP+ Y ++ GY G A +L
Sbjct: 444 IYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLK 503
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
E +N + +Y++ I+ CK E++ A LL +M ++G++P++ +N +
Sbjct: 504 EMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMI 555
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 84/208 (40%), Gaps = 35/208 (16%)
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV----------------------- 379
++I + R + A ++MI G PG+ FN++
Sbjct: 100 AIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNETKGN 159
Query: 380 --ISAYS---------KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
+ YS + G + E+L M GL P+V YT L+ G G +E
Sbjct: 160 VKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGK 219
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
++ + + + TY LI G+ K+ ++L +MK G+ PNV YN +I
Sbjct: 220 QLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRC 279
Query: 489 CLKALDWRTAEKLLEDMRLKGLHLNGIT 516
C A +L ++MR +G+ N +T
Sbjct: 280 CNDG-KLNNAFELFDEMRERGVACNVVT 306
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 2/136 (1%)
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
P + ++I+A+ ++ A+ M RGL P T+ L+ E+A
Sbjct: 92 PTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWR 151
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ NE K N +L ++ +I+G C++ D ++L +M+++G+ PNV Y LI C
Sbjct: 152 VFNETKGN-VKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDG-C 209
Query: 490 LKALDWRTAEKLLEDM 505
K D ++L M
Sbjct: 210 CKNGDIERGKQLFYKM 225
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 145/299 (48%), Gaps = 6/299 (2%)
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
K A +F + + G N TY I + +M G LP+ I
Sbjct: 185 KIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTI 244
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEA 333
I +CK K EA + L K + P +I+ LC+E + +K ++L++ S
Sbjct: 245 IDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQ-MKETSEILEEMS--K 301
Query: 334 RKYAIK--PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
R+Y F+++I C + + H A L ++M+ G P + ++I++ KAG++
Sbjct: 302 RRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNR 361
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
AME L MR RGL P+ TYT L+ G++ G +++A +I+ E +N + +TY+ LI
Sbjct: 362 AMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALIN 421
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
G+C L + A LL EM + G P+V Y+ +I C + + A +L +M KG+
Sbjct: 422 GHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFC-RNQELEKAFQLKVEMVAKGI 479
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 152/328 (46%), Gaps = 33/328 (10%)
Query: 237 FTIEALSRRKIFDWAWSVCEKMI-----ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYT 291
+ L+R K++ A S+ E+++ ETG D + K + CK A VV +
Sbjct: 84 LALHILTRYKLYKTAQSLAEEVVVNTVDETGE--DLFQCLKNSYYQCKSSSAVFDLVVKS 141
Query: 292 LAREKKMYPPQSVVAF---------------LISSLCQEDETVKLALDMLDDFSGEARKY 336
AR + S+V ++ ++ + ++VK+A + +
Sbjct: 142 CARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSP 201
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ ++ +IR C ++ +M G P +N++I AY K + A ++L
Sbjct: 202 NVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLL 261
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
+LM +GL P++ +Y +++G GQM+E EIL E K VT++TLI GYC +
Sbjct: 262 RLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNV 321
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
F AL L EM G+ PNV Y LI S+C KA + A + L+ MR +GLH NG T
Sbjct: 322 GNFHQALVLHAEMVKNGLSPNVVTYTTLINSMC-KAGNLNRAMEFLDQMRDRGLHPNGRT 380
Query: 517 ----------RALIRAVKELEEDAIENG 534
+ ++ ++ ++ +ENG
Sbjct: 381 YTTLIDGFSQQGFLKQAYQIMKEMVENG 408
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 152/329 (46%), Gaps = 6/329 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVL-TVEILNELIALFSKLGKGKAAFEVF 220
+A+L A+ + K+ V I KE+ E GV V N LI F G + F
Sbjct: 171 NAILDAVIRT--KQSVKIAEGIFKEM--VESGVSPNVYTYNILIRGFCTAGNLEMGLFFF 226
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ GC+ N TY I+A + + A+ + M G P+ +I+ C+
Sbjct: 227 GEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCRE 286
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
G+ KE + +++ P + LI+ C + AL + + +
Sbjct: 287 GQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQ-ALVLHAEMVKNGLSPNVVT 345
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++++I S+C+ +++ A L +M G P + ++I +S+ G + A +++K M
Sbjct: 346 YTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMV 405
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G P + TY L++G+ G+ME+A +L E + V+Y T+I G+C+ +E +
Sbjct: 406 ENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELE 465
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A +L EM G+ P+V Y+ LIQ LC
Sbjct: 466 KAFQLKVEMVAKGISPDVATYSSLIQGLC 494
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 164/373 (43%), Gaps = 16/373 (4%)
Query: 152 FFKWVTSGV------VDALLKAICSSVGKKEVYALWDIVKEIGEKEK-GVL-TVEILNEL 203
F + V SGV + L++ C++ G E+ + GE E+ G L V N +
Sbjct: 191 FKEMVESGVSPNVYTYNILIRGFCTA-GNLEMGLFF-----FGEMERNGCLPNVVTYNTI 244
Query: 204 IALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGS 263
I + KL K AF++ G N +Y I L R + E+M +
Sbjct: 245 IDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRY 304
Query: 264 LPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLAL 323
+PD +I+ +C G +A V++ + + P LI+S+C+ + A+
Sbjct: 305 VPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAG-NLNRAM 363
Query: 324 DMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAY 383
+ LD + ++++I + + A ++ +M+ G P +N++I+ +
Sbjct: 364 EFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGH 423
Query: 384 SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
G M A +L+ M RG PDV +Y+ ++SG+ ++E+A ++ E
Sbjct: 424 CILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDV 483
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
TY +LI+G CK L EM +G+ P+ Y LI + C++ D A +L +
Sbjct: 484 ATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEG-DLDKALRLHD 542
Query: 504 DMRLKGLHLNGIT 516
+M KG + +T
Sbjct: 543 EMIQKGFSPDIVT 555
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 133/299 (44%), Gaps = 16/299 (5%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K G A E ++ D G N TY I+ S++ A+ + ++M+E G
Sbjct: 349 LINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENG 408
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P +I+ C G+ ++A + E+ P + +IS C+ E K A
Sbjct: 409 FTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEK-A 467
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+ + + + +SS+I+ LC+ + + L +M+S G PP + S+I+A
Sbjct: 468 FQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINA 527
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y GD+ A+ + M +G PD+ TY L++G+ + +EA +L + S +
Sbjct: 528 YCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPN 587
Query: 443 PVTYHTLI---------------RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
+TY+TLI +G+C + A ++L M G + N + YN +I
Sbjct: 588 EITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIH 646
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 99/259 (38%), Gaps = 21/259 (8%)
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
++F + G ++ TY I A D A + ++MI+ G PD +I+ F
Sbjct: 504 DLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGF 563
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
K + KEA K++ L+ L +E ++ + L D
Sbjct: 564 NKQSRTKEA---------KRL---------LLKLLYEESVPNEITYNTLID---NCNNLE 602
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
K ++++ C ++ A +L M+ +G V+N +I +SK G++ A + K
Sbjct: 603 FKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYK 662
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M G P T L + G+ E ++L+ K+ LI K
Sbjct: 663 EMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEG 722
Query: 458 EFDCALKLLNEMKDVGVQP 476
D +L +M G+ P
Sbjct: 723 NMDAVFNVLKDMALSGLLP 741
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 150/321 (46%), Gaps = 2/321 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
LN +I F + K A+ V K G + T+ I+ L A + ++M+
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
E G PD I++ C+ G A + E+ + + +I SLC+ D +
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR-DGCI 244
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
A+ + + + K ++ ++S++R LC+ + LL M+S P FN +
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+ + K G + A E+ K M +RG+ P++ TY LM GY ++ EA +L+ +N
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
VT+ +LI+GYC ++ D +K+ + G+ N Y+ L+Q C ++ + AE
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC-QSGKIKLAE 423
Query: 500 KLLEDMRLKGLHLNGITRALI 520
+L ++M G+ + +T ++
Sbjct: 424 ELFQEMVSHGVLPDVMTYGIL 444
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 137/309 (44%), Gaps = 3/309 (0%)
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
AA +F + G ++ TY + L + ++ + + M+ +P+ ++
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR 334
F K GK +EA+ +Y + + P L+ C ++ + A +MLD
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE-ANNMLDLMVRNKC 364
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
I F+S+I+ C +K V + + G ++ ++ + ++G + A E
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+ + M S G+ PDV TY L+ G + G++E+A EI + +K+ L V Y T+I G C
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG 514
K + + A L + GV+PNV Y +I LC K A LL M G N
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG-SLSEANILLRKMEEDGNAPND 543
Query: 515 IT-RALIRA 522
T LIRA
Sbjct: 544 CTYNTLIRA 552
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 92/196 (46%), Gaps = 1/196 (0%)
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
L LD + I + +I CR A ++L K++ G P FN++I
Sbjct: 106 LVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLI 165
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
G ++ A+ ++ M G +PDV TY +++G G A ++L + ++ + +
Sbjct: 166 KGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVK 225
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
TY T+I C+ D A+ L EM+ G++ +V YN L++ LC KA W
Sbjct: 226 ADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC-KAGKWNDGAL 284
Query: 501 LLEDMRLKGLHLNGIT 516
LL+DM + + N IT
Sbjct: 285 LLKDMVSREIVPNVIT 300
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 151/343 (44%), Gaps = 7/343 (2%)
Query: 154 KWVTSGVV--DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLG 211
K + S VV ++L++ +C + GK AL ++K++ +E V V N L+ +F K G
Sbjct: 257 KGIKSSVVTYNSLVRGLCKA-GKWNDGAL--LLKDMVSREI-VPNVITFNVLLDVFVKEG 312
Query: 212 KGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVG 271
K + A E++ + G N TY ++ + A ++ + M+ PD
Sbjct: 313 KLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFT 372
Query: 272 KIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSG 331
+I +C + + V+ ++ + + L+ CQ + +KLA ++ +
Sbjct: 373 SLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK-IKLAEELFQEMVS 431
Query: 332 EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
+ + ++ LC + A + + G ++ ++I K G +
Sbjct: 432 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED 491
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
A + + +G+KP+V TYT ++SG G + EA +L + +++ + + TY+TLIR
Sbjct: 492 AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
+ + + + KL+ EMK G + +I L LD
Sbjct: 552 AHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELD 594
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 85/189 (44%), Gaps = 6/189 (3%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
FS ++ R K + ++ G N +I+ + + A +L +
Sbjct: 91 FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM 150
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G +PD T+ L+ G G++ EA +++ +N + VTY++++ G C+ +
Sbjct: 151 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH-----LNGI 515
AL LL +M++ V+ +V Y+ +I SLC A L ++M KG+ N +
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGC-IDAAISLFKEMETKGIKSSVVTYNSL 269
Query: 516 TRALIRAVK 524
R L +A K
Sbjct: 270 VRGLCKAGK 278
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 80/191 (41%), Gaps = 15/191 (7%)
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A L +MI P P F+ SA ++ ++ K + G+ ++YT +++
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
+ + A +L + K T++TLI+G + A+ L++ M + G QP
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 191
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMR--------------LKGLHLNGITRALIRA 522
+V YN ++ +C ++ D A LL M + L +G A I
Sbjct: 192 DVVTYNSIVNGIC-RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 523 VKELEEDAIEN 533
KE+E I++
Sbjct: 251 FKEMETKGIKS 261
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 163/355 (45%), Gaps = 27/355 (7%)
Query: 194 VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWS 253
V T I+ + + +F+++ +A + +GCV N Y I ALS++ A
Sbjct: 218 VFTFGIVMKALCMFNEV---DSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALK 274
Query: 254 VCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC 313
+ E+M G +PD + +I CK K +A + + YP FL+ LC
Sbjct: 275 LLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLC 334
Query: 314 QEDETVKLALDMLDDFSGEARKYAIK---PFSSVIRSLCRMKDVHG----AKTLLSK-MI 365
+ + EARK IK P ++++ +L + G A++ L++ MI
Sbjct: 335 RIGKL------------NEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMI 382
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
+ G P +N ++ K G ++ A +++ M RG +P+V TY L++G G +E
Sbjct: 383 NFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLE 442
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
EA +L+E ++ V Y+ LI C+ E+ AL LL+EM G +P++ YN LI
Sbjct: 443 EAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLI 502
Query: 486 QSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAVKELEEDAIENGEALVE 539
LC K A +L +M L G N +T LI A+ L A + LV
Sbjct: 503 YGLC-KVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHAL--LRRGAFQKALTLVN 554
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 148/319 (46%), Gaps = 3/319 (0%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNK-FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
ILN LI + G+ K A N+ ++G + TY + L + +A + +
Sbjct: 356 ILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNE 415
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M G P+ +++ CK G +EA +V + + + LI +LC++ E
Sbjct: 416 MSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRK-E 474
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
V +AL++L + + K + ++S+I LC++ + A L M+ +G N +N
Sbjct: 475 KVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYN 534
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
++I A + G A+ ++ M RG D TY GL+ + G +E+ E+ + +
Sbjct: 535 TLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMD 594
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
++ + +I G CK+ + D A + L + + G P++ YN ++ LC K +
Sbjct: 595 GLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLC-KVGRIKE 653
Query: 498 AEKLLEDMRLKGLHLNGIT 516
A L + ++++G+ + T
Sbjct: 654 ALNLFDRLQVEGVRPDAFT 672
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 122/297 (41%), Gaps = 44/297 (14%)
Query: 156 VTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEK--EKGVLTVEILNELIALFSKLGKG 213
+ S + + L+ A+C K++V+ +++ E+ K + + T N LI K+ +
Sbjct: 458 INSVIYNCLICALCR---KEKVHVALNLLSEMCTKGCKPDLFTY---NSLIYGLCKVDRI 511
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
AF +F+ G VAN TY I AL RR F A ++ M+ G D +
Sbjct: 512 DEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGL 571
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEA 333
I FCK G ++ +Y ++M ++D +
Sbjct: 572 IKAFCKVGNIEKGLELY-----EQM--------------------------IMDGLGADT 600
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
I +I LC++ V A L I+ G P +NSV++ K G + A+
Sbjct: 601 ISCNI-----MINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEAL 655
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
+ ++ G++PD +TY +S G + +AC +N S +T++ L+
Sbjct: 656 NLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLV 712
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 127/309 (41%), Gaps = 6/309 (1%)
Query: 182 DIVKEIGEK--EKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI 239
D+V E+ + E V+T IL + K G + A V ++ G N Y I
Sbjct: 411 DLVNEMSRRGCEPNVITYAIL---VNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLI 467
Query: 240 EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
AL R++ A ++ +M G PD +I CK + EA ++
Sbjct: 468 CALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAV 527
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
LI +L + K AL +++D ++ +I++ C++ ++
Sbjct: 528 ANNVTYNTLIHALLRRGAFQK-ALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLE 586
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
L +MI +G N +I+ K G + A E L+ +RG PD+ TY +++G
Sbjct: 587 LYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLC 646
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
G+++EA + + + R TY+T I CK + A + G P+
Sbjct: 647 KVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNL 706
Query: 480 EYNKLIQSL 488
+N L+ +L
Sbjct: 707 TWNVLVYTL 715
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 83/197 (42%), Gaps = 37/197 (18%)
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR------------------- 400
LL +M EG ++F ++ Y KAG A+ +L MR
Sbjct: 134 LLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEIL 193
Query: 401 -----------------SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
S+G+ P V+T+ +M +++ AC +L + K+ +
Sbjct: 194 VTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNS 253
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
+ Y TLI + + ALKLL EM +G P+V +N +I LC K A KL++
Sbjct: 254 IVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLC-KVNKIHDATKLVD 312
Query: 504 DMRLKGLHLNGITRALI 520
M L+G + + +T +
Sbjct: 313 RMLLRGFYPDNMTYGFL 329
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 166/359 (46%), Gaps = 6/359 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+K +C + KE D V +G ++N L K+G+ + A ++
Sbjct: 142 NTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGL----CKIGETRTALQMLR 197
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
K N Y I++L + K+ A+ + +MI PD +I FC G
Sbjct: 198 KIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVG 257
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ +EA ++ K + P L+ +LC+E +K A +ML E + +
Sbjct: 258 QLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGN-LKGAKNMLVVMMKEGVMPNVVTY 316
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
SS++ C + V+ AK +L+ + G P + ++I+ + K + A+ + M+
Sbjct: 317 SSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQF 376
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
+G+ PD TY L+ G G++ A E+++E N + TY+ LI CK D
Sbjct: 377 KGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQ 436
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
A+ L+ ++KD G+QP++ +N LI LC K + A+ + +D+ KG +N T ++
Sbjct: 437 AIALVKKIKDQGIQPDMYTFNILIYGLC-KVGRLKNAQDVFQDLLSKGYSVNAWTYNIM 494
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 149/334 (44%), Gaps = 38/334 (11%)
Query: 226 YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKE 285
+G + T+ I ++A+S+ K+++ G PD+ +I C GK KE
Sbjct: 97 HGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKE 156
Query: 286 AHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVI 345
A + + Q LI+ LC+ ET + AL ML G+ K + ++++I
Sbjct: 157 ALHFHDHVLALGFHLDQFSYGTLINGLCKIGET-RTALQMLRKIDGKLVKINVVMYNTII 215
Query: 346 RSLCRMKDVHGAKTLLSKMIS-----------------------------------EGPP 370
SLC+ K V A L S+MI+ +
Sbjct: 216 DSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNIN 275
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P FN ++ A K G++ A ML +M G+ P+V TY+ LM GY Q+ +A +
Sbjct: 276 PDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHV 335
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
LN + + + +Y T+I G+CK++ D AL L N+M+ G+ P+ YN LI LC
Sbjct: 336 LNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLC- 394
Query: 491 KALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAV 523
K+ A +L+++M G N T LI A+
Sbjct: 395 KSGRISYAWELVDEMHDNGQPANIFTYNCLIDAL 428
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 160/335 (47%), Gaps = 19/335 (5%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V + LI F +G+ + AF +F + + T+ ++AL + A ++
Sbjct: 243 VVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLV 302
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEA-HVVYTLAREKKMYPPQSVVAFLISSLCQ- 314
M++ G +P+ ++ +C + +A HV+ T+++ P +I+ C+
Sbjct: 303 VMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAA-PNAHSYCTMINGFCKI 361
Query: 315 --EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
DE + L DM F G A ++S+I LC+ + A L+ +M G P
Sbjct: 362 KMVDEALSLFNDM--QFKGIAPDKV--TYNSLIDGLCKSGRISYAWELVDEMHDNGQPAN 417
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+N +I A K + A+ ++K ++ +G++PD+YT+ L+ G G+++ A ++
Sbjct: 418 IFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQ 477
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
+ ++ TY+ ++ G CK FD A LL++M D G+ P+ Y LIQ+L K
Sbjct: 478 DLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKD 537
Query: 493 LDWRTAEKLLEDMRLKGLHLNGITRALIRAVKELE 527
+ + AEKLL +M I R ++ A++ LE
Sbjct: 538 ENEK-AEKLLREM---------IARDVVYALEGLE 562
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 91/199 (45%), Gaps = 8/199 (4%)
Query: 299 YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR------SLCRMK 352
Y P + FLI+ L + + V +D+ + S KP SS+I SL +
Sbjct: 21 YIPSFLFPFLITRLYSQFQFVPSNIDVDNVVSSFNHLLRTKPTSSIIEFNKILGSLVKSN 80
Query: 353 DVH--GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ H A +L ++ G P FN +I+ Y +M A M+ + G +PD T
Sbjct: 81 NNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTIT 140
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
+ L+ G G+++EA + L +Y TLI G CK+ E AL++L ++
Sbjct: 141 FNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKID 200
Query: 471 DVGVQPNVDEYNKLIQSLC 489
V+ NV YN +I SLC
Sbjct: 201 GKLVKINVVMYNTIIDSLC 219
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 169/360 (46%), Gaps = 16/360 (4%)
Query: 151 CFFKWVTSGV-VDALLKAICSSVGKKEVYALWDIVKEI--GEKEKGVLTVEILNELIALF 207
C VT V VDAL K S VG A D+VK++ G V+T N L+ F
Sbjct: 210 CPPNLVTYNVLVDALCKL--SMVG-----AAQDVVKKMIEGGFAPNVMT---FNSLVDGF 259
Query: 208 SKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDS 267
K G A ++ G N TY I+ L + + F A V E+M G PD+
Sbjct: 260 CKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDA 319
Query: 268 EKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLD 327
+I CK K +EA + P V + +I + C+ + ++ A L
Sbjct: 320 FTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLE-AQKTLQ 378
Query: 328 DFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP-PGNAVFNSVISAYSKA 386
+ + + + +++VI LC++ + A+ +L +M G P +++VI+ K+
Sbjct: 379 EMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKS 438
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
+ A ++L M G PDV TYT ++ G G++EEA +L K+ + VTY
Sbjct: 439 DMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTY 498
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
TLI G CK + D A +++ EM++ G PN+ YN ++ LC+ + A++L++ M+
Sbjct: 499 TTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSG-RIKEAQQLVQRMK 557
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 139/309 (44%), Gaps = 5/309 (1%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I+ F G AA E+ + G + T+ I A++ D A M
Sbjct: 116 NIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM-- 173
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ +I+ F + K +EA + RE+ P L+ +LC+ V
Sbjct: 174 -GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKL-SMVG 231
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A D++ + F+S++ C+ +V A+ LL M+++G P ++++I
Sbjct: 232 AAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALI 291
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
K+ A E+L+ M++RG+ PD +TY+ L+ G ++EEA ++L +
Sbjct: 292 DGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCT 351
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
V Y ++I +CK + A K L EM+ P+V YN +I LC K A+
Sbjct: 352 PDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLC-KLGKIAEAQV 410
Query: 501 LLEDMRLKG 509
+LE M+ G
Sbjct: 411 ILEQMQESG 419
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 144/308 (46%), Gaps = 9/308 (2%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+ + + K + A ++F C + +Y I A + E+M
Sbjct: 81 NSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKS 140
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDET 318
G PD+ II+ G A + + M +VV + LI++ + +
Sbjct: 141 AGFAPDAFTHTPIITAMANAGDLDGA-----MDHLRSMGCDPNVVTYTALIAAFARAKK- 194
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
++ A+ +L++ + ++ ++ +LC++ V A+ ++ KMI G P FNS
Sbjct: 195 LEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNS 254
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
++ + K G++ A ++L +M ++G++P+V TY+ L+ G + EA E+L E K
Sbjct: 255 LVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRG 314
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
TY LI G CK ++ + A ++L M G P+V Y+ +I + C K+ A
Sbjct: 315 VTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFC-KSGKLLEA 373
Query: 499 EKLLEDMR 506
+K L++MR
Sbjct: 374 QKTLQEMR 381
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 3/149 (2%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++S+++ L R K A L + P +N VIS + AGD+ A+E+L+ M+
Sbjct: 80 WNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMK 139
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
S G PD +T+T +++ AN G ++ A ++ + + VTY LI + + ++ +
Sbjct: 140 SAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNVVTYTALIAAFARAKKLE 196
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A+KLL EM++ G PN+ YN L+ +LC
Sbjct: 197 EAMKLLEEMRERGCPPNLVTYNVLVDALC 225
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 110/275 (40%), Gaps = 39/275 (14%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K K + A ++ + GC + Y I A + A ++M +
Sbjct: 325 LIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQR 384
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVV-AFLISSLCQEDETVKL 321
PD +I CK GK EA V+ +E P V + +I+ LC+ D V+
Sbjct: 385 KSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVE- 443
Query: 322 ALDMLDDFSG-----------------------EARKYAIK------------PFSSVIR 346
A +LD E +Y ++ ++++I
Sbjct: 444 AQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLIS 503
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS--RGL 404
LC+ + V A+ ++ +M + G PP +N++++ +G + A ++++ M+
Sbjct: 504 GLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAEC 563
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
PD TY +++ + ++EA ++L + K S
Sbjct: 564 SPDAATYRTIVNALMSSDLVQEAEQLLEQMKSTTS 598
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 142/301 (47%), Gaps = 9/301 (2%)
Query: 225 DYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAK 284
D G TY I+ R+ + A+ + ++M+ G + +++ CK GK +
Sbjct: 304 DVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKME 363
Query: 285 EAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSV 344
+A + EK + P + LI C+ + A ++LD+ + +S +
Sbjct: 364 KALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMAR-AFELLDEMKKRKLAPTVLTYSVI 422
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
I LCR ++ G +L +M+ G P V+ ++++A++K G + + +L+ MR +G+
Sbjct: 423 INGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGI 482
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
PDV+ Y L+ G+ +MEEA L E + R + TY I GY K E + A +
Sbjct: 483 LPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADR 542
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLC--------LKALDWRTAEKLLEDMRLKGLHLNGIT 516
NEM GV PNV Y LI+ C + + ++L+D++ + ++G++
Sbjct: 543 YFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLS 602
Query: 517 R 517
R
Sbjct: 603 R 603
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 141/325 (43%), Gaps = 4/325 (1%)
Query: 193 GVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWA 251
GVL V I LI K G AF VF + + +TY I LSR A
Sbjct: 551 GVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEA 610
Query: 252 WSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISS 311
+ + ++ E G LP++ +IS CK G +A + K + P LI
Sbjct: 611 FGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDG 670
Query: 312 LCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
LC+ E ++ A ++ DD G +++++ C+ K+ A LL +M+ G PP
Sbjct: 671 LCKAGE-IERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPP 729
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
++N +++ K A+++ + M +G V ++ L+ GY G+++EA +L
Sbjct: 730 DAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEANHLL 788
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
E + + VTY +LI CK A +L EM++ V P Y L+
Sbjct: 789 EEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGY-HN 847
Query: 492 ALDWRTAEKLLEDMRLKGLHLNGIT 516
+ L E+M KG+ + +T
Sbjct: 848 IGNMSEVSALFEEMVAKGIEPDKMT 872
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 139/312 (44%), Gaps = 2/312 (0%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+ L+ +K G+ + + + + + G + + Y I + K + A + +M
Sbjct: 453 VYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEM 512
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+E P++ G I + K G+ + A + + P + LI C+E
Sbjct: 513 LERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNV 572
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+ A + ++ +S +I L R +H A + S++ +G P +NS
Sbjct: 573 TE-AFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNS 631
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+IS K G++ A ++L+ M +G+ PD+ TY L+ G G++E A + ++ +
Sbjct: 632 LISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRG 691
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
+ VTY ++ GYCK + A +LL EM GV P+ YN +I + C K + A
Sbjct: 692 LTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYN-VILNFCCKEEKFEKA 750
Query: 499 EKLLEDMRLKGL 510
L ++M KG
Sbjct: 751 LDLFQEMLEKGF 762
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 20/265 (7%)
Query: 252 WSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISS 311
W V + M LPD +IS CK G K+A V EK A L+
Sbjct: 209 WKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEK---------ARLL-- 257
Query: 312 LCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
DE ++L M+D + + + +I C K AK +L +MI G P
Sbjct: 258 ----DEAIELKRSMVD----KGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKP 309
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+N++I + + GD+ A + M + G++ ++ + L++G G+ME+A EI+
Sbjct: 310 EPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIM 369
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
E + TY LI G+C+ + A +LL+EMK + P V Y+ +I LC +
Sbjct: 370 QEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLC-R 428
Query: 492 ALDWRTAEKLLEDMRLKGLHLNGIT 516
+ + +L +M + GL N +
Sbjct: 429 CGNLQGTNAILREMVMNGLKPNAVV 453
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 139/345 (40%), Gaps = 39/345 (11%)
Query: 159 GVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFE 218
G+ AL++ C E ++++ + + + V+ + LI S+ GK AF
Sbjct: 557 GIYTALIEGHCKEGNVTEAFSVFRFILS----RRVLQDVQTYSVLIHGLSRNGKMHEAFG 612
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+F++ + G + N TY I ++ D A + E+M G PD +I C
Sbjct: 613 IFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLC 672
Query: 279 KGG--------------------------------KAKEAHVVYTLAREK--KMYPPQSV 304
K G K+K + L E + PP +
Sbjct: 673 KAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAF 732
Query: 305 VAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM 364
+ +I + C ++E + ALD+ + + + F+++I C+ + A LL +M
Sbjct: 733 IYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVS-FNTLIEGYCKSGKLQEANHLLEEM 791
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
I + P + + S+I KAG M A + M+ R + P TYT L+ GY N G M
Sbjct: 792 IEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNM 851
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
E + E +TY+ +I YC+ A KL +E+
Sbjct: 852 SEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEI 896
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 145/321 (45%), Gaps = 10/321 (3%)
Query: 204 IALFSKLGKGKAAFEVF-------NKFGDYGCVAN-QETYYFTIEALSRRKIFDWAWSVC 255
+ LF K+ G A +V N + V N ++ +E + ++ D A +
Sbjct: 205 VELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELK 264
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
M++ G +PD +I+ FC +++EA ++ + + P LI ++
Sbjct: 265 RSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQ 324
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ ++ A + D+ + + +++++ +C+ + A ++ +M+ +G P +
Sbjct: 325 GD-IEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQT 383
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
++ +I + + +M A E+L M+ R L P V TY+ +++G G ++ IL E
Sbjct: 384 YSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMV 443
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
N + + V Y TL+ + K + + +L M++ G+ P+V YN LI C KA
Sbjct: 444 MNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFC-KAKRM 502
Query: 496 RTAEKLLEDMRLKGLHLNGIT 516
A L +M + L N T
Sbjct: 503 EEARTYLMEMLERRLRPNAHT 523
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 101/237 (42%), Gaps = 26/237 (10%)
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
AAF++ + G + Y + + + F+ A + ++M+E G + +I
Sbjct: 714 AAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG-FASTVSFNTLI 772
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED---ETVKLALDMLDDFSG 331
+CK GK +EA+ + EK+ P LI C+ E +L L+M
Sbjct: 773 EGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEM------ 826
Query: 332 EARKY--AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
+ R K ++S++ + ++ L +M+++G P + +I AY + G++
Sbjct: 827 QERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNV 886
Query: 390 TPAMEMLKL----------MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
ME KL M+S G + + T + + G+ G M+EA E+L K
Sbjct: 887 ---MEACKLKDEILVKGMPMKS-GFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVK 939
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 69/158 (43%), Gaps = 32/158 (20%)
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV-----------------TYHT 448
PDVYTYT ++S + G +++A +L E + L TY
Sbjct: 222 PDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDI 281
Query: 449 LIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLK 508
LI G+C + A +L EM DVG++P YN LI ++ D A ++ ++M
Sbjct: 282 LINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGF-MRQGDIEQAFRIKDEMVAC 340
Query: 509 GLH---------LNGITRA-----LIRAVKELEEDAIE 532
G+ LNG+ +A + ++E+ E +E
Sbjct: 341 GIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVE 378
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 99/241 (41%), Gaps = 8/241 (3%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
I N ++ K K + A ++F + + G A+ ++ IE + A + E+M
Sbjct: 733 IYNVILNFCCKEEKFEKALDLFQEMLEKG-FASTVSFNTLIEGYCKSGKLQEANHLLEEM 791
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
IE +P+ +I CK G EA ++ +E+ + P L+
Sbjct: 792 IEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNM 851
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP------G 372
+++ + ++ + + + +I + CR +V A L +++ +G P G
Sbjct: 852 SEVS-ALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLG 910
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+ + + AG+M A E+L+ M G + + L+ G NG E++ +L
Sbjct: 911 LPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLK 970
Query: 433 E 433
+
Sbjct: 971 Q 971
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 160/350 (45%), Gaps = 10/350 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+AL+ +C + K+ + D + E G + L V N LI+ KLG+ A E+ +
Sbjct: 306 NALVNGLCRTGHIKQGLEMMDFMLEKGFE----LDVYTYNSLISGLCKLGEIDEAVEILH 361
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
C N TY I L + + A + + G LPD +I C
Sbjct: 362 HMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTS 421
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLD--DFSGEARKYAIK 339
+ A ++ +EK P + + LI SLC E +K AL +L + SG AR +
Sbjct: 422 NREIAMELFEEMKEKGCDPDEFTYSILIESLCSE-RRLKEALMLLKEMELSGCARNVVV- 479
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
++++I LC+ V A+ + +M G + +N++I+ K+ + A +++ M
Sbjct: 480 -YNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQM 538
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
GLKPD +TYT ++ + G ++ A +I+ N VTY TLI G CK
Sbjct: 539 IMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRV 598
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
D A KLL ++ G+ YN +IQ+LC K + A +L +M KG
Sbjct: 599 DVASKLLRSVQMKGMVLTPQAYNPVIQALC-KRKRTKEAMRLFREMMEKG 647
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 153/338 (45%), Gaps = 8/338 (2%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V N LI K + + A + +YG +++T+ ++ + A + E
Sbjct: 199 VSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKE 258
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
M+E+G S V +++ CK G+ +EA + + E+ P Q L++ LC+
Sbjct: 259 LMVESGCELTSVSVNVLVNGLCKEGRIEEA--LRFIYEEEGFCPDQVTFNALVNGLCRTG 316
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+K L+M+D + + + ++S+I LC++ ++ A +L M+S P +
Sbjct: 317 H-IKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTY 375
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N++I K + A E+ +++ S+G+ PDV T+ L+ G E A E+ E K+
Sbjct: 376 NTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKE 435
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
TY LI C AL LL EM+ G NV YN LI LC K
Sbjct: 436 KGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLC-KNNRVG 494
Query: 497 TAEKLLEDMRLKGLHLNGIT-RALIRAV---KELEEDA 530
AE + + M + G+ + +T LI + K +EE A
Sbjct: 495 DAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAA 532
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 107/206 (51%), Gaps = 10/206 (4%)
Query: 334 RKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
R +A+KP ++ + L + + +TL SKM+++ PP + FN +I A KA +
Sbjct: 156 RDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQL 215
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
PA+ ML+ M + GL+PD T+T LM G+ +E A I ++ L+ V+ + L
Sbjct: 216 RPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVL 275
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
+ G CK + AL+ + E + G P+ +N L+ LC + + ++++ M KG
Sbjct: 276 VNGLCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLC-RTGHIKQGLEMMDFMLEKG 332
Query: 510 LHLNGIT-RALIRAVKELEE--DAIE 532
L+ T +LI + +L E +A+E
Sbjct: 333 FELDVYTYNSLISGLCKLGEIDEAVE 358
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 133/313 (42%), Gaps = 6/313 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
++L++ +C + ++ L++ +KE G + T IL E + +L K A +
Sbjct: 411 NSLIQGLCLTSNREIAMELFEEMKEKG-CDPDEFTYSILIESLCSERRL---KEALMLLK 466
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ GC N Y I+ L + A + ++M G S +I+ CK
Sbjct: 467 EMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSK 526
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ +EA + + + P + ++ CQ+ + +K A D++ + + + I +
Sbjct: 527 RVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGD-IKRAADIVQNMTLNGCEPDIVTY 585
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
++I LC+ V A LL + +G +N VI A K AM + + M
Sbjct: 586 GTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMME 645
Query: 402 RGLKPDVYTYTGLMSGYAN-GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+G PDV TY + G N GG ++EA + E + ++ L G C L D
Sbjct: 646 KGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMED 705
Query: 461 CALKLLNEMKDVG 473
++L+N + + G
Sbjct: 706 TLIQLINMVMEKG 718
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 3/139 (2%)
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+VF+ ++ ++AG + +L+ M S + D T+ + YA + L
Sbjct: 93 SVFHELLRQLARAGSFDSMLTLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFL 152
Query: 434 AKKNHSRLSPVT--YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
+ + P T Y+ + K + L ++M V P+V +N LI++LC K
Sbjct: 153 LMERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALC-K 211
Query: 492 ALDWRTAEKLLEDMRLKGL 510
A R A +LEDM GL
Sbjct: 212 AHQLRPAILMLEDMPNYGL 230
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 171/379 (45%), Gaps = 9/379 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ A C +E + L D + G K V N +I K GK A V +
Sbjct: 293 NTLINAYCRQGLLEEAFELMDSMSGKGLKP----CVFTYNAIINGLCKTGKYLRAKGVLD 348
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ G + TY + R A + ++M G +PD +I K G
Sbjct: 349 EMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNG 408
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+A + + + P + LI C+ + + AL + D+ + + +
Sbjct: 409 CLDQALKYFRDMKNAGLAPDNVIYTILIGGFCR-NGVMSEALKVRDEMLEQGCVLDVVTY 467
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
++++ LC+ K + A L ++M G P F ++I+ YSK G+M A+ + ++M
Sbjct: 468 NTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQ 527
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
R LKPDV TY L+ G+ G +ME+ E+ N+ + ++Y LI GYC +
Sbjct: 528 RNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSE 587
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALI 520
A +L +EM + G + + N +++ C +A + A++ L +M LKG+ +GIT LI
Sbjct: 588 AFRLWDEMVEKGFEATIITCNTIVKGYC-RAGNAVKADEFLSNMLLKGIVPDGITYNTLI 646
Query: 521 RAVKELEEDAIENGEALVE 539
++E+ ++ ALV
Sbjct: 647 NGF--IKEENMDRAFALVN 663
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 142/302 (47%), Gaps = 10/302 (3%)
Query: 190 KEKGV-LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
K KG+ +++ N L+ K+G A+E++ + G N T I AL + +
Sbjct: 211 KSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKI 270
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
+ S M E G PD +I+ +C+ G +EA + K + P +
Sbjct: 271 ENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAI 330
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKM 364
I+ LC+ + ++ A +LD E K + P ++ ++ CR ++ A+ + +M
Sbjct: 331 INGLCKTGKYLR-AKGVLD----EMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEM 385
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
S+G P F+++I SK G + A++ + M++ GL PD YT L+ G+ G M
Sbjct: 386 PSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVM 445
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
EA ++ +E + L VTY+T++ G CK + A +L EM + GV P+ + L
Sbjct: 446 SEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTL 505
Query: 485 IQ 486
I
Sbjct: 506 IN 507
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 127/286 (44%), Gaps = 5/286 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F + G A +V ++ + GCV + TY + L + K+ A + +M E G
Sbjct: 435 LIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 494
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD +I+ + K G +A ++ + ++ + P LI C+ E K+
Sbjct: 495 VFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVN 554
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++ +D + +I C M V A L +M+ +G N+++
Sbjct: 555 -ELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKG 613
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y +AG+ A E L M +G+ PD TY L++G+ M+ A ++N K +S L
Sbjct: 614 YCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVN--KMENSGLL 671
Query: 443 P--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
P +TY+ ++ G+ + A ++ +M + GV P+ Y LI
Sbjct: 672 PDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLIN 717
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 9/196 (4%)
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
V LA ++ + + + + +I +LC+ + + K+ LS M +G P +N+
Sbjct: 235 VDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNT 294
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I+AY + G + A E++ M +GLKP V+TY +++G G+ A +L+E K
Sbjct: 295 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIG 354
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL----CLKALD 494
TY+ L+ C+ + A ++ +EM GV P++ ++ LI L CL
Sbjct: 355 MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQ-- 412
Query: 495 WRTAEKLLEDMRLKGL 510
A K DM+ GL
Sbjct: 413 ---ALKYFRDMKNAGL 425
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 113/279 (40%), Gaps = 37/279 (13%)
Query: 191 EKG-VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
E+G VL V N ++ K A E+F + + G + T+ I S+ +
Sbjct: 457 EQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMN 516
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A ++ E MI+ PD +I FCKG + ++ + ++ +++YP LI
Sbjct: 517 KAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILI 576
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
+ C V A + D+ + + I +++++ CR + A LS M+ +G
Sbjct: 577 NGYCNMG-CVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGI 635
Query: 370 PPGNAVFNSVISAY-----------------------------------SKAGDMTPAME 394
P +N++I+ + S+ G M A
Sbjct: 636 VPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAEL 695
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
++ M RG+ PD TYT L++G+ ++EA + +E
Sbjct: 696 IMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDE 734
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 85/174 (48%), Gaps = 1/174 (0%)
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+I +S++ L ++ V A + +++ G N +I+A K + L
Sbjct: 218 SINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFL 277
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
M +G+ PDV TY L++ Y G +EEA E+++ + TY+ +I G CK
Sbjct: 278 SDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKT 337
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
++ A +L+EM +G+ P+ YN L+ C + + AE++ ++M +G+
Sbjct: 338 GKYLRAKGVLDEMLKIGMSPDTATYNILLVE-CCRNDNMMDAERIFDEMPSQGV 390
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 109/239 (45%), Gaps = 25/239 (10%)
Query: 317 ETVKLALDMLDDFSGEAR--KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP--- 371
E ++L +D + K++++ FS++I L R + + A+ ++ +M+ +
Sbjct: 109 ENLQLGQRFIDSITSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVE 168
Query: 372 ---------GNA-----VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
GN VF+ ++ Y +A + E ++++S+GL + L+ G
Sbjct: 169 IVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGG 228
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
G ++ A EI E ++ +++ T + +I CK ++ + L++M++ GV P+
Sbjct: 229 LVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPD 288
Query: 478 VDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH-----LNGITRALIRAVKELEEDAI 531
V YN LI + C + L A +L++ M KGL N I L + K L +
Sbjct: 289 VVTYNTLINAYCRQGL-LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGV 346
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 124/348 (35%), Gaps = 54/348 (15%)
Query: 190 KEKGVLTVEILNELIALFSKLGKGKAAF-----------------EVFNKFGDYGCVANQ 232
++ GV VEI+ L+ + G F E F G +
Sbjct: 160 RKSGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSI 219
Query: 233 ETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTL 292
+ L + D AW + ++++ +G + + +I+ CK K + +
Sbjct: 220 NACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSD 279
Query: 293 AREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMK 352
EK ++P + ++++I + CR
Sbjct: 280 MEEKGVFPD------------------------------------VVTYNTLINAYCRQG 303
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT 412
+ A L+ M +G P +N++I+ K G A +L M G+ PD TY
Sbjct: 304 LLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYN 363
Query: 413 GLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
L+ M +A I +E V++ LI K D ALK +MK+
Sbjct: 364 ILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNA 423
Query: 473 GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
G+ P+ Y LI C + A K+ ++M +G L+ +T I
Sbjct: 424 GLAPDNVIYTILIGGFCRNGV-MSEALKVRDEMLEQGCVLDVVTYNTI 470
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 80/207 (38%), Gaps = 1/207 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI F K + + E++N N +Y I A+ + ++M+E
Sbjct: 538 NTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVE 597
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G I+ +C+ G A +A + K + P LI+ +E E +
Sbjct: 598 KGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKE-ENMD 656
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A +++ + ++ ++ R + A+ ++ KMI G P + + S+I
Sbjct: 657 RAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLI 716
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPD 407
+ + ++ A + M RG PD
Sbjct: 717 NGHVTQNNLKEAFRVHDEMLQRGFVPD 743
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 110/447 (24%), Positives = 185/447 (41%), Gaps = 40/447 (8%)
Query: 80 AQMDPSADAVESKEEEAYEIDGDKLENVLSLLQSSVDGYLESSLDSFELDLHEDFVLKVL 139
A+M+P VE G L ++ + Q S YL + +D F + H + L +L
Sbjct: 85 ARMNPRPSIVEF---------GKFLGSIAKMKQYSTVVYLCNQMDLFGVT-HTVYSLNIL 134
Query: 140 ETPLVLGENLVCFFKWVTSGV-----------------VDALLKAICSSVGKKEVYALWD 182
N +C V V L+ +C+ K L++
Sbjct: 135 I-------NCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYN 187
Query: 183 IVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEAL 242
+ G E V++ N LI G A VF K GC N TY I++L
Sbjct: 188 EMVRSGH-EPDVIS---YNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSL 243
Query: 243 SRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQ 302
+ ++ + A +M+ G PD+ I+ C G+ EA ++ + P
Sbjct: 244 CKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDV 303
Query: 303 SVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLS 362
+I SL +D V A D L + + + +++++ LC + ++ A L
Sbjct: 304 VTYNIIIDSL-YKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFK 362
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG 422
KM +G P +N++I + K + AME L M RG+ P+ TY+ ++ G+ N G
Sbjct: 363 KMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLG 422
Query: 423 QMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
Q++EA ++ E + + +T+ L+ G C+ A + M + GV+PN+ YN
Sbjct: 423 QLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYN 482
Query: 483 KLIQSLCLKALDWRTAEKLLEDMRLKG 509
L+ CL+ A K+ E M KG
Sbjct: 483 ALMNGYCLRC-KMNEARKVFEIMVGKG 508
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 141/319 (44%), Gaps = 2/319 (0%)
Query: 202 ELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET 261
+ + +K+ + + N+ +G + I L R D+A SV KM +
Sbjct: 98 KFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKL 157
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
G PD +I+ C GK K A +Y P LI+ LC T +
Sbjct: 158 GIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNT-NM 216
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A+ + K + ++++I SLC+ + V+ A LS+M+ G PP +NS++
Sbjct: 217 AVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVH 276
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
G + A + K M G KPDV TY ++ + +A + L+E
Sbjct: 277 GLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPP 336
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
VTY T++ G C L + + A++L +M+ G +P+V YN +I SLC L A +
Sbjct: 337 DVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRL-VNDAMEF 395
Query: 502 LEDMRLKGLHLNGITRALI 520
L +M +G+ N +T + I
Sbjct: 396 LSEMVDRGIPPNAVTYSTI 414
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 148/347 (42%), Gaps = 41/347 (11%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N ++ LG+ A +F + GC + TY I++L + ++ + A +M++
Sbjct: 272 NSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVD 331
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDET 318
G PD I+ C G+ EA ++ +K P VVA+ +I SLC+ D
Sbjct: 332 QGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKP--DVVAYNTIIDSLCK-DRL 388
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
V A++ L + +S+++ C + + A L +M+ P F+
Sbjct: 389 VNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSI 448
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA----------- 427
++ + G ++ A + + M +G++P++YTY LM+GY +M EA
Sbjct: 449 LVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKG 508
Query: 428 C-------EILNEAKKNHSR---------------LSP--VTYHTLIRGYCKLEEFDCAL 463
C IL N R L+P VTY+T+++G C + A
Sbjct: 509 CAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQ 568
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+L +M G+ P + Y+ L+ LC K A KL + M+ K L
Sbjct: 569 ELFKKMCSSGMLPTLMTYSILLNGLC-KHGHLDEALKLFKSMKEKKL 614
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 130/313 (41%), Gaps = 34/313 (10%)
Query: 210 LGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEK 269
LG+ A +F K GC + Y I++L + ++ + A +M++ G P++
Sbjct: 351 LGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVT 410
Query: 270 VGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE-------------- 315
I+ FC G+ EA ++ + + P + L+ LCQE
Sbjct: 411 YSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMT 470
Query: 316 ----DETVKLALDMLDDFS-----GEARKYA-----------IKPFSSVIRSLCRMKDVH 355
+ + +++ + EARK + ++ +I C + +
Sbjct: 471 EKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMD 530
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
AK LL++M + P +N+++ G + A E+ K M S G+ P + TY+ L+
Sbjct: 531 KAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILL 590
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
+G G ++EA ++ K+ + Y LI G + + A L +++ G+Q
Sbjct: 591 NGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQ 650
Query: 476 PNVDEYNKLIQSL 488
P YN +I+ L
Sbjct: 651 PPGRTYNVMIKGL 663
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 112/249 (44%), Gaps = 1/249 (0%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
F LG+ A ++F + + N T+ ++ L + + A V E M E G P+
Sbjct: 418 FCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPN 477
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
+++ +C K EA V+ + K P LI+ C K A +L
Sbjct: 478 IYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDK-AKALL 536
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
S + ++++++ LC + + A+ L KM S G P ++ +++ K
Sbjct: 537 TQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKH 596
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
G + A+++ K M+ + L+PD+ YT L+ G GG++E A + ++ + + TY
Sbjct: 597 GHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTY 656
Query: 447 HTLIRGYCK 455
+ +I+G K
Sbjct: 657 NVMIKGLLK 665
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 3/171 (1%)
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG 422
+M P P F + + +K + + + M G+ VY+ L++
Sbjct: 83 RMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLN 142
Query: 423 QMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
++ A + + K + +T+ TLI G C + A++L NEM G +P+V YN
Sbjct: 143 HVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYN 202
Query: 483 KLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIEN 533
LI LC + + A + + M G N +T I + L +D + N
Sbjct: 203 TLINGLC-NSGNTNMAVHVFKKMEQNGCKPNVVTYNTI--IDSLCKDRLVN 250
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 163/355 (45%), Gaps = 27/355 (7%)
Query: 194 VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWS 253
V T I+ + + +F+++ +A + +GCV N Y I ALS++ A
Sbjct: 218 VFTFGIVMKALCMFNEV---DSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALK 274
Query: 254 VCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC 313
+ E+M G +PD + +I CK K +A + + YP FL+ LC
Sbjct: 275 LLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLC 334
Query: 314 QEDETVKLALDMLDDFSGEARKYAIK---PFSSVIRSLCRMKDVHG----AKTLLSK-MI 365
+ + EARK IK P ++++ +L + G A++ L++ MI
Sbjct: 335 RIGKL------------NEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMI 382
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
+ G P +N ++ K G ++ A +++ M RG +P+V TY L++G G +E
Sbjct: 383 NFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLE 442
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
EA +L+E ++ V Y+ LI C+ E+ AL LL+EM G +P++ YN LI
Sbjct: 443 EAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLI 502
Query: 486 QSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAVKELEEDAIENGEALVE 539
LC K A +L +M L G N +T LI A+ L A + LV
Sbjct: 503 YGLC-KVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHAL--LRRGAFQKALTLVN 554
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 148/319 (46%), Gaps = 3/319 (0%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNK-FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
ILN LI + G+ K A N+ ++G + TY + L + +A + +
Sbjct: 356 ILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNE 415
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M G P+ +++ CK G +EA +V + + + LI +LC++ E
Sbjct: 416 MSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRK-E 474
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
V +AL++L + + K + ++S+I LC++ + A L M+ +G N +N
Sbjct: 475 KVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYN 534
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
++I A + G A+ ++ M RG D TY GL+ + G +E+ E+ + +
Sbjct: 535 TLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMD 594
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
++ + +I G CK+ + D A + L + + G P++ YN ++ LC K +
Sbjct: 595 GLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLC-KVGRIKE 653
Query: 498 AEKLLEDMRLKGLHLNGIT 516
A L + ++++G+ + T
Sbjct: 654 ALNLFDRLQVEGVRPDAFT 672
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 122/297 (41%), Gaps = 44/297 (14%)
Query: 156 VTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEK--EKGVLTVEILNELIALFSKLGKG 213
+ S + + L+ A+C K++V+ +++ E+ K + + T N LI K+ +
Sbjct: 458 INSVIYNCLICALCR---KEKVHVALNLLSEMCTKGCKPDLFTY---NSLIYGLCKVDRI 511
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
AF +F+ G VAN TY I AL RR F A ++ M+ G D +
Sbjct: 512 DEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGL 571
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEA 333
I FCK G ++ +Y ++M ++D +
Sbjct: 572 IKAFCKVGNIEKGLELY-----EQM--------------------------IMDGLGADT 600
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
I +I LC++ V A L I+ G P +NSV++ K G + A+
Sbjct: 601 ISCNI-----MINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEAL 655
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
+ ++ G++PD +TY +S G + +AC +N S +T++ L+
Sbjct: 656 NLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLV 712
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 127/309 (41%), Gaps = 6/309 (1%)
Query: 182 DIVKEIGEK--EKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI 239
D+V E+ + E V+T IL + K G + A V ++ G N Y I
Sbjct: 411 DLVNEMSRRGCEPNVITYAIL---VNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLI 467
Query: 240 EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
AL R++ A ++ +M G PD +I CK + EA ++
Sbjct: 468 CALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAV 527
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
LI +L + K AL +++D ++ +I++ C++ ++
Sbjct: 528 ANNVTYNTLIHALLRRGAFQK-ALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLE 586
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
L +MI +G N +I+ K G + A E L+ +RG PD+ TY +++G
Sbjct: 587 LYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLC 646
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
G+++EA + + + R TY+T I CK + A + G P+
Sbjct: 647 KVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNL 706
Query: 480 EYNKLIQSL 488
+N L+ +L
Sbjct: 707 TWNVLVYTL 715
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 83/197 (42%), Gaps = 37/197 (18%)
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR------------------- 400
LL +M EG ++F ++ Y KAG A+ +L MR
Sbjct: 134 LLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEIL 193
Query: 401 -----------------SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
S+G+ P V+T+ +M +++ AC +L + K+ +
Sbjct: 194 VTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNS 253
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
+ Y TLI + + ALKLL EM +G P+V +N +I LC K A KL++
Sbjct: 254 IVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLC-KVNKIHDATKLVD 312
Query: 504 DMRLKGLHLNGITRALI 520
M L+G + + +T +
Sbjct: 313 RMLLRGFYPDNMTYGFL 329
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 164/361 (45%), Gaps = 10/361 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEK-GVL-TVEILNELIALFSKLGKGKAAFEV 219
+ L++ CS V L + GE E+ G L V N LI + K+G+ AF +
Sbjct: 14 NILIRGFCS------VGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 67
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
G N +Y I L R AW + E+M G PD +++ +CK
Sbjct: 68 LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCK 127
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
G +A V++ + P LI+S+C+ + A++ D + +
Sbjct: 128 EGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKA-RNLNRAMEFFDQMRIRGLRPNER 186
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
++++I R ++ A +L++M G P +N+ I + M A+ +++ M
Sbjct: 187 TYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEM 246
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
+GL PDV +Y+ ++SG+ G+++ A ++ E + VTY +LI+G C++
Sbjct: 247 VEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRL 306
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRAL 519
A L EM D+G+ P+ Y LI + C++ D A L ++M KG + +T ++
Sbjct: 307 TEACDLSQEMLDMGLPPDEFTYTTLINAYCVEG-DLNKALHLHDEMIHKGFLPDAVTYSV 365
Query: 520 I 520
+
Sbjct: 366 L 366
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 142/271 (52%), Gaps = 3/271 (1%)
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M G LP+ +I +CK G+ EA + K M P +I+ LC+E
Sbjct: 35 EMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREG 94
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
++K A ++L++ + +++++ C+ + H A + ++M+ G P +
Sbjct: 95 -SMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTY 153
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
++I++ KA ++ AME MR RGL+P+ TYT L+ G++ G + EA ILNE +
Sbjct: 154 TALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTE 213
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ S VTY+ I G+C LE + AL ++ EM + G+ P+V Y+ +I C K +
Sbjct: 214 SGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKG-ELD 272
Query: 497 TAEKLLEDMRLKGLHLNGIT-RALIRAVKEL 526
A ++ ++M KG+ + +T +LI+ + E+
Sbjct: 273 RAFQMKQEMVEKGVSPDAVTYSSLIQGLCEM 303
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 93/176 (52%), Gaps = 1/176 (0%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+ ++ +IR C + ++ +M G P +N++I AY K G + A +LK
Sbjct: 10 VYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLK 69
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M S+G++P++ +Y +++G G M+EA EIL E VTY+TL+ GYCK
Sbjct: 70 SMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEG 129
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
F AL + EM GV P+V Y LI S+C KA + A + + MR++GL N
Sbjct: 130 NFHQALVIHAEMVRNGVSPSVVTYTALINSMC-KARNLNRAMEFFDQMRIRGLRPN 184
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 125/293 (42%), Gaps = 24/293 (8%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A E F++ G N+ TY I+ SR+ + + A+ + +M E+G P I
Sbjct: 169 AMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIH 228
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
C + +EA V EK + P + +IS C++ E LD E +
Sbjct: 229 GHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGE-----LDRAFQMKQEMVE 283
Query: 336 YAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
+ P +SS+I+ LC M+ + A L +M+ G PP + ++I+AY GD+
Sbjct: 284 KGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNK 343
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHT--- 448
A+ + M +G PD TY+ L++G + EA +L + S S VTY T
Sbjct: 344 ALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIE 403
Query: 449 ------------LIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
LI+G+C A ++ M + +P YN +I C
Sbjct: 404 NCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHC 456
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 69/119 (57%), Gaps = 2/119 (1%)
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
++RSR + P+VYTY L+ G+ + G++++ E ++N + VTY+TLI YCK+
Sbjct: 1 MIRSR-VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMG 59
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
D A LL M G+QPN+ YN +I LC + + A ++LE+M KG + +T
Sbjct: 60 RIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREG-SMKEAWEILEEMGYKGFTPDEVT 117
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 116/305 (38%), Gaps = 30/305 (9%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I+ F + G+ AF++ + + G + TY I+ L + A + ++M++ G
Sbjct: 261 IISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMG 320
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV--- 319
PD +I+ +C G +A ++ K P + LI+ L ++ T
Sbjct: 321 LPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAK 380
Query: 320 KLALDML-----------DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
+L ++ D K ++I+ C +H A + M+
Sbjct: 381 RLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERN 440
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
PG AV+N +I + + G++ A + K M G P T L+ G EE
Sbjct: 441 HKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMS 500
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
E++ + ++ C+L E + A L+ G V ++L L
Sbjct: 501 EVIGDTLRS----------------CRLNEAELAKVLVEINHKEGNMEAVLNVSRLYNKL 544
Query: 489 CLKAL 493
LK +
Sbjct: 545 SLKCV 549
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 155/328 (47%), Gaps = 12/328 (3%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
+L+ +C + +D E+ + V++ LI KLG+ AAF++F K
Sbjct: 66 ILQGLCRCGRVAQALEHFDASLELAHAQPDVVS---YTTLINGLCKLGRVDAAFDLFRKM 122
Query: 224 -GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
GC N TY ++ L ++ D A +V + + PD +++ + G+
Sbjct: 123 VAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGR 182
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
EA +T E+ P ++V+F +I+ LC+ AL++ ++ +
Sbjct: 183 VDEALATFTQMTEEGYVP--TLVSFNAIITGLCRARRLAD-ALEVFNEMIDRDFHPNLVT 239
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+S VI LC+ + A+ LL +M+SEG P + ++ +S AG + A+ +L+ M
Sbjct: 240 YSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMV 299
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
S+G PDV TYT ++ G++++A EI E N + VTY LI GYC+ D
Sbjct: 300 SQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVD 359
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSL 488
K++ EM +PNV YN +I L
Sbjct: 360 EGGKVMREM---ACRPNVVTYNTMIWGL 384
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
S VTY+ LIRG+C + D A LL EM G+Q N + ++Q LC
Sbjct: 24 SSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLC 71
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 155/327 (47%), Gaps = 5/327 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+++L CSS KE ++ G E V+T +L + + K G+ A ++F+
Sbjct: 270 NSILHGYCSSGQPKEAIGFLKKMRSDG-VEPDVVTYSLLMDYLC---KNGRCMEARKIFD 325
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G TY ++ + + + + M+ G PD +I + K G
Sbjct: 326 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQG 385
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
K +A +V++ R++ + P +I LC+ V+ A+ + E +
Sbjct: 386 KVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGR-VEDAMLYFEQMIDEGLSPGNIVY 444
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+S+I LC A+ L+ +M+ G FNS+I ++ K G + + ++ +LM
Sbjct: 445 NSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVR 504
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+KP+V TY L++GY G+M+EA ++L+ + + VTY TLI GYCK+ +
Sbjct: 505 IGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMED 564
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSL 488
AL L EM+ GV P++ YN ++Q L
Sbjct: 565 ALVLFKEMESSGVSPDIITYNIILQGL 591
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 165/363 (45%), Gaps = 19/363 (5%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEI---GEKEKGVLTVEILNELIALFSKLGKGKAAFE 218
+ LLK +C +E L ++ + G V ++N F K G A+
Sbjct: 162 NILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVING----FFKEGDSDKAYS 217
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+++ D G + + TY I AL + + D A V M++ G +PD I+ +C
Sbjct: 218 TYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 277
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
G+ KEA R + P + L+ LC+ ++ A + D + K I
Sbjct: 278 SSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCME-ARKIFDSMTKRGLKPEI 336
Query: 339 KPFSSVIRSLCR---MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+ ++++ + ++HG LL M+ G P + VF+ +I AY+K G + AM +
Sbjct: 337 TTYGTLLQGYATKGALVEMHG---LLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLV 393
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGY 453
MR +GL P+ TY ++ G++E+A +L + LSP + Y++LI G
Sbjct: 394 FSKMRQQGLNPNAVTYGAVIGILCKSGRVEDA--MLYFEQMIDEGLSPGNIVYNSLIHGL 451
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
C +++ A +L+ EM D G+ N +N +I S C K +EKL E M G+ N
Sbjct: 452 CTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHC-KEGRVIESEKLFELMVRIGVKPN 510
Query: 514 GIT 516
IT
Sbjct: 511 VIT 513
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 143/300 (47%), Gaps = 17/300 (5%)
Query: 233 ETYYFTIE--ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
+ Y F+I A +++ D A V KM + G P++ G +I CK G+ ++A + +
Sbjct: 370 DHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYF 429
Query: 291 TLAREKKMYPPQSVVAFLISSLC---QEDETVKLALDMLDDFSGEARKYAIKP--FSSVI 345
++ + P V LI LC + + +L L+MLD R + F+S+I
Sbjct: 430 EQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLD------RGICLNTIFFNSII 483
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
S C+ V ++ L M+ G P +N++I+ Y AG M AM++L M S GLK
Sbjct: 484 DSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLK 543
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
P+ TY+ L++GY +ME+A + E + + +TY+ +++G + A +L
Sbjct: 544 PNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 603
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL----LEDMRLKGLHLNGITRALIR 521
+ + G Q + YN ++ LC L + L D++L+ N + AL++
Sbjct: 604 YVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLK 663
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 145/331 (43%), Gaps = 24/331 (7%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSR-------RKIFDWAWS 253
N ++ + G+ K A K G + TY ++ L + RKIFD
Sbjct: 270 NSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFD---- 325
Query: 254 VCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC 313
M + G P+ G ++ + G E H + L ++P V + LI +
Sbjct: 326 ---SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 382
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
++ + + L FS + R+ + P + +VI LC+ V A +MI EG
Sbjct: 383 KQGKVDQAMLV----FS-KMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 437
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
PGN V+NS+I A E++ M RG+ + + ++ + G++ E+ +
Sbjct: 438 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 497
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + + + +TY+TLI GYC + D A+KLL+ M VG++PN Y+ LI C
Sbjct: 498 LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 557
Query: 490 LKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
K A L ++M G+ + IT +I
Sbjct: 558 -KISRMEDALVLFKEMESSGVSPDIITYNII 587
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 136/335 (40%), Gaps = 40/335 (11%)
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET---GSLPDSEKVGKIIS 275
V + + GC+ N +Y ++ L A + M + GS PD +I+
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
F K G + +A+ Y ++ + P +I++LC+ K A+++L+
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDK-AMEVLNTMVKNGVM 263
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
++S++ C A L KM S+G P ++ ++ K G A ++
Sbjct: 264 PDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKI 323
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
M RGLKP++ TY L+ GYA G + E +L+ +N + LI Y K
Sbjct: 324 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAK 383
Query: 456 LEEFDCALKLLNEMKDVGVQPN---------------------------VDE-------- 480
+ D A+ + ++M+ G+ PN +DE
Sbjct: 384 QGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIV 443
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
YN LI LC W AE+L+ +M +G+ LN I
Sbjct: 444 YNSLIHGLC-TCNKWERAEELILEMLDRGICLNTI 477
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 118/282 (41%), Gaps = 6/282 (2%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA-HVVYTL 292
TY I R D ++ +I+ G D+ ++ C + +A +V
Sbjct: 89 TYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 148
Query: 293 AREKKMYPPQSVVAFLISSLCQED---ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLC 349
E P L+ LC E+ E ++L L M+ D G + +++VI
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALEL-LHMMADDRGGGSPPDVVSYTTVINGFF 207
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
+ D A + +M+ G P +NS+I+A KA M AME+L M G+ PD
Sbjct: 208 KEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCM 267
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
TY ++ GY + GQ +EA L + + + VTY L+ CK A K+ + M
Sbjct: 268 TYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327
Query: 470 KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH 511
G++P + Y L+Q K LL+ M G+H
Sbjct: 328 TKRGLKPEITTYGTLLQGYATKGA-LVEMHGLLDLMVRNGIH 368
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 49/262 (18%), Positives = 98/262 (37%), Gaps = 2/262 (0%)
Query: 191 EKGV-LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
++G+ L N +I K G+ + ++F G N TY I D
Sbjct: 469 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMD 528
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A + M+ G P++ +I+ +CK + ++A V++ + P ++
Sbjct: 529 EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
L Q T A ++ + + + ++ ++ LC+ K A + +
Sbjct: 589 QGLFQTRRTAA-AKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDL 647
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
FN +I A K G A ++ S GL P+ +TY + G +EE +
Sbjct: 648 KLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQ 707
Query: 430 ILNEAKKNHSRLSPVTYHTLIR 451
+ + N + + ++R
Sbjct: 708 LFLSMEDNGCTVDSGMLNFIVR 729
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 57/293 (19%), Positives = 115/293 (39%), Gaps = 7/293 (2%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+ N LI K + A E+ + D G N + I++ + + + E M
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELM 502
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+ G P+ +I+ +C GK EA + + + P + LI+ C+
Sbjct: 503 VRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISR- 561
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
++ AL + + I ++ +++ L + + AK L ++ G + +N
Sbjct: 562 MEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 621
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
++ K A++M + + LK + T+ ++ G+ +EA ++ N
Sbjct: 622 ILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNG 681
Query: 439 SRLSPVTYHTL---IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ TY + I G LEE D +L M+D G + N +++ L
Sbjct: 682 LVPNYWTYRLMAENIIGQGLLEELD---QLFLSMEDNGCTVDSGMLNFIVREL 731
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 145/311 (46%), Gaps = 2/311 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
LN +I F + K A+ V K G + T+ I+ L A + ++M+
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
E G PD I++ C+ G A + E+ + + +I SLC+ D +
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR-DGCI 244
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
A+ + + + K ++ ++S++R LC+ + LL M+S P FN +
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+ + K G + A E+ K M +RG+ P++ TY LM GY ++ EA +L+ +N
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
VT+ +LI+GYC ++ D +K+ + G+ N Y+ L+Q C ++ + AE
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC-QSGKIKLAE 423
Query: 500 KLLEDMRLKGL 510
+L ++M G+
Sbjct: 424 ELFQEMVSHGV 434
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 137/309 (44%), Gaps = 3/309 (0%)
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
AA +F + G ++ TY + L + ++ + + M+ +P+ ++
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR 334
F K GK +EA+ +Y + + P L+ C ++ + A +MLD
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE-ANNMLDLMVRNKC 364
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
I F+S+I+ C +K V + + G ++ ++ + ++G + A E
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+ + M S G+ PDV TY L+ G + G++E+A EI + +K+ L V Y T+I G C
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG 514
K + + A L + GV+PNV Y +I LC K A LL M G N
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG-SLSEANILLRKMEEDGNAPND 543
Query: 515 IT-RALIRA 522
T LIRA
Sbjct: 544 CTYNTLIRA 552
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 92/196 (46%), Gaps = 1/196 (0%)
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
L LD + I + +I CR A ++L K++ G P FN++I
Sbjct: 106 LVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLI 165
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
G ++ A+ ++ M G +PDV TY +++G G A ++L + ++ + +
Sbjct: 166 KGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVK 225
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
TY T+I C+ D A+ L EM+ G++ +V YN L++ LC KA W
Sbjct: 226 ADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC-KAGKWNDGAL 284
Query: 501 LLEDMRLKGLHLNGIT 516
LL+DM + + N IT
Sbjct: 285 LLKDMVSREIVPNVIT 300
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 149/337 (44%), Gaps = 7/337 (2%)
Query: 154 KWVTSGVV--DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLG 211
K + S VV ++L++ +C + GK AL ++K++ +E V V N L+ +F K G
Sbjct: 257 KGIKSSVVTYNSLVRGLCKA-GKWNDGAL--LLKDMVSREI-VPNVITFNVLLDVFVKEG 312
Query: 212 KGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVG 271
K + A E++ + G N TY ++ + A ++ + M+ PD
Sbjct: 313 KLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFT 372
Query: 272 KIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSG 331
+I +C + + V+ ++ + + L+ CQ + +KLA ++ +
Sbjct: 373 SLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK-IKLAEELFQEMVS 431
Query: 332 EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
+ + ++ LC + A + + G ++ ++I K G +
Sbjct: 432 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED 491
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
A + + +G+KP+V TYT ++SG G + EA +L + +++ + + TY+TLIR
Sbjct: 492 AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ + + + KL+ EMK G + +I L
Sbjct: 552 AHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 85/189 (44%), Gaps = 6/189 (3%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
FS ++ R K + ++ G N +I+ + + A +L +
Sbjct: 91 FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM 150
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G +PD T+ L+ G G++ EA +++ +N + VTY++++ G C+ +
Sbjct: 151 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH-----LNGI 515
AL LL +M++ V+ +V Y+ +I SLC A L ++M KG+ N +
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGC-IDAAISLFKEMETKGIKSSVVTYNSL 269
Query: 516 TRALIRAVK 524
R L +A K
Sbjct: 270 VRGLCKAGK 278
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 80/191 (41%), Gaps = 15/191 (7%)
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A L +MI P P F+ SA ++ ++ K + G+ ++YT +++
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
+ + A +L + K T++TLI+G + A+ L++ M + G QP
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 191
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMR--------------LKGLHLNGITRALIRA 522
+V YN ++ +C ++ D A LL M + L +G A I
Sbjct: 192 DVVTYNSIVNGIC-RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 523 VKELEEDAIEN 533
KE+E I++
Sbjct: 251 FKEMETKGIKS 261
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 146/336 (43%), Gaps = 37/336 (11%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG------------- 262
AF VF++ GC N TY I L D A + E+MIE G
Sbjct: 252 AFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPIT 311
Query: 263 ----------------------SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP 300
P+ + +IS + GK + A +Y ++ + P
Sbjct: 312 ALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVP 371
Query: 301 PQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTL 360
LI+ LC AL + G + ++ +I+ LC D+ A L
Sbjct: 372 NTVTYNALINELCVGGR-FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVL 430
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
KM+ GP P +N++I+ Y G++ A +L LM+ G +PD +TY L+SG++
Sbjct: 431 FEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSK 490
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
G++E A E + +PV+Y LI G+ K + D AL LL M+++G PNV+
Sbjct: 491 WGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVES 550
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
YN +I L K + AEK+ + M +GL N IT
Sbjct: 551 YNAVINGLS-KENRFSEAEKICDKMVEQGLLPNVIT 585
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 152/325 (46%), Gaps = 10/325 (3%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
V+ LI+ S+LGK + A +++K G V N TY I L F A +
Sbjct: 337 NVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIF 396
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLC 313
M GSL +++ +II C GG ++A V++ + KM P +VV + LI+
Sbjct: 397 HWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLF--EKMLKMGPLPTVVTYNTLINGYL 454
Query: 314 QEDETVKLA--LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
+ A LD++ + E ++ ++ ++ + + A +M+ G P
Sbjct: 455 TKGNVNNAARLLDLMKENGCEPDEWT---YNELVSGFSKWGKLESASFYFQEMVECGLNP 511
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+ ++I +SK G + A+ +LK M G P+V +Y +++G + + EA +I
Sbjct: 512 NPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKIC 571
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
++ + + +TY TLI G C+ A K+ ++M+ PN+ Y+ LI LC +
Sbjct: 572 DKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQE 631
Query: 492 ALDWRTAEKLLEDMRLKGLHLNGIT 516
AE LL++M KGL + +T
Sbjct: 632 G-KADEAEILLKEMERKGLAPDEVT 655
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 111/229 (48%), Gaps = 6/229 (2%)
Query: 266 DSEKVGKIISWFCKGGKAKEAHVVYT-----LAREKKMYPPQSVVAFLISSLCQEDETVK 320
D+E V + W K K + L R++ ++ P + L+ C+ +E ++
Sbjct: 87 DTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDR-VFAPADHIRILMIKACRNEEEIR 145
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
D L++ SG +++ ++++ L + + V GA+ L +M++ G P FN++I
Sbjct: 146 RVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLI 205
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ SK G + A +L + L PDV+TYT L+ G+ ++ A + + K
Sbjct: 206 NILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCD 265
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ VTY TLI G C D AL +L EM + G++P V Y I +LC
Sbjct: 266 PNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALC 314
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 125/264 (47%), Gaps = 2/264 (0%)
Query: 242 LSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPP 301
L++ ++ + A ++ ++M+ +G P +I+ K GK +EA ++ + + + P
Sbjct: 173 LAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPD 232
Query: 302 QSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLL 361
LI C+ + + LA + D E +S++I LC V A +L
Sbjct: 233 VFTYTSLILGHCR-NRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDML 291
Query: 362 SKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG 421
+MI +G P + I+A A+E++ M+ RG +P+V TYT L+SG +
Sbjct: 292 EEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRL 351
Query: 422 GQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEY 481
G++E A + ++ K + VTY+ LI C F ALK+ + M+ G N Y
Sbjct: 352 GKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTY 411
Query: 482 NKLIQSLCLKALDWRTAEKLLEDM 505
N++I+ LCL D A L E M
Sbjct: 412 NEIIKGLCLGG-DIEKAMVLFEKM 434
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 132/310 (42%), Gaps = 37/310 (11%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N LI + SK GK + A + ++ Y + TY I R + D A+ V ++M+
Sbjct: 201 FNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMV 260
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G P+S +I+ C G+ E
Sbjct: 261 KEGCDPNSVTYSTLINGLCNEGRVDE---------------------------------- 286
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
ALDML++ + + + ++ I +LC ++ A L+++M G P + ++
Sbjct: 287 --ALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTAL 344
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
IS S+ G + A+ + M GL P+ TY L++ GG+ A +I + + + S
Sbjct: 345 ISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGS 404
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
+ TY+ +I+G C + + A+ L +M +G P V YN LI K + A
Sbjct: 405 LANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKG-NVNNAA 463
Query: 500 KLLEDMRLKG 509
+LL+ M+ G
Sbjct: 464 RLLDLMKENG 473
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 129/301 (42%), Gaps = 3/301 (0%)
Query: 189 EKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
E + + NE+I G + A +F K G + TY I +
Sbjct: 400 EGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNV 459
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP-PQSVVAF 307
+ A + + M E G PD +++S F K GK + A + E + P P S A
Sbjct: 460 NNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTAL 519
Query: 308 LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
+ +D V +AL +L ++ +++VI L + A+ + KM+ +
Sbjct: 520 IDGH--SKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQ 577
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P + ++I + G A ++ M R P++YTY+ L+ G G+ +EA
Sbjct: 578 GLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA 637
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
+L E ++ VT+ +LI G+ L D A LL M D+G +PN Y+ L++
Sbjct: 638 EILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKG 697
Query: 488 L 488
L
Sbjct: 698 L 698
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 125/315 (39%), Gaps = 42/315 (13%)
Query: 139 LETPLVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIG-EKEKGVLTV 197
+E +VL E ++ T + L+ + L D++KE G E ++
Sbjct: 424 IEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTY-- 481
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
NEL++ FSK GK ++A F + + G N +Y I+ S+ D A S+ ++
Sbjct: 482 ---NELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKR 538
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M E G P+ E +I+ K + EA + E+ + P LI LC+
Sbjct: 539 MEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGR 598
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
T ++A K F + + C P ++
Sbjct: 599 T----------------QFAFKIFHDMEKRKCL--------------------PNLYTYS 622
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
S+I + G A +LK M +GL PD T+T L+ G+ G+++ A +L
Sbjct: 623 SLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDM 682
Query: 438 HSRLSPVTYHTLIRG 452
+ + TY L++G
Sbjct: 683 GCKPNYRTYSVLLKG 697
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 152/327 (46%), Gaps = 5/327 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
++++ CSS KE + G E V+T N L+ K G+ A ++F+
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDG-VEPDVVTY---NSLMDYLCKNGRCTEARKMFD 328
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G TY ++ + + + + M+ G P+ +I + K G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
K +A +V++ R++ + P +I LC+ V+ A+ + E +
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGR-VEDAMRYFEQMIDERLSPGNIVY 447
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+S+I SLC AK L+ +M+ G FNS+I ++ K G + + ++ LM
Sbjct: 448 NSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVR 507
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+KPD+ TY+ L+ GY G+M+EA ++L + VTY+TLI GYCK+ +
Sbjct: 508 IGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMED 567
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSL 488
AL L EM+ GV P++ YN ++Q L
Sbjct: 568 ALVLFREMESSGVSPDIITYNIILQGL 594
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 143/304 (47%), Gaps = 15/304 (4%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G N + I A +++ D A V KM + G PD+ G +I CK G+ ++A
Sbjct: 369 GIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDA 428
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLC---QEDETVKLALDMLDDFSGEARKYAIKP--F 341
+ ++++ P V LI SLC + D+ +L L+MLD R + F
Sbjct: 429 MRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLD------RGICLDTIFF 482
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+S+I S C+ V ++ L M+ G P ++++I Y AG M A ++L M S
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 542
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+KPD TY L++GY +ME+A + E + + +TY+ +++G +
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 602
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD---WRTAEKL-LEDMRLKGLHLNGITR 517
A +L + + G Q + YN ++ LC L R + L L D++L+ N +
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 662
Query: 518 ALIR 521
AL++
Sbjct: 663 ALLK 666
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 120/273 (43%), Gaps = 3/273 (1%)
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGS--LPDSEKVGKIISW 276
V + GC+ N +Y ++ L A + + M + G PD +I+
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
F K G +A+ Y ++ + P + +I++LC+ K A+++L
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDK-AMEVLTSMVKNGVMP 267
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ ++S++ C A L KM S+G P +NS++ K G T A +M
Sbjct: 268 NCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMF 327
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
M RGLKP++ TY L+ GYA G + E +L+ +N + + LI Y K
Sbjct: 328 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQ 387
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ D A+ + ++M+ G+ P+ Y +I LC
Sbjct: 388 GKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC 420
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 116/471 (24%), Positives = 193/471 (40%), Gaps = 51/471 (10%)
Query: 90 ESKEEEAYEI-------DGDKLENVLSLLQSSVDGYL-ESSLDSFELDLHEDFVLKVLET 141
E++ +EA E+ GD +V+S + ++G+ E LD HE +L
Sbjct: 175 ENRSQEALELLQMMPDDGGDCPPDVVSY-TTVINGFFKEGDLDKAYGTYHEMLDRGILP- 232
Query: 142 PLVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVL-TVEIL 200
N+V + S ++ AL KA K + L +VK GV+
Sbjct: 233 ------NVVTY-----SSIIAALCKA---QAMDKAMEVLTSMVK------NGVMPNCRTY 272
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N ++ + G+ K A K G + TY ++ L + A + + M +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ G ++ + G E H + L ++P V + LI + ++ + +
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392
Query: 321 LALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
L FS + R+ + P + +VI LC+ V A +MI E PGN V+
Sbjct: 393 AMLV----FS-KMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVY 447
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
NS+I + A E++ M RG+ D + ++ + G++ E+ ++ + +
Sbjct: 448 NSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVR 507
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ +TY TLI GYC + D A KLL M VG++P+ YN LI C K
Sbjct: 508 IGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC-KISRME 566
Query: 497 TAEKLLEDMRLKGLHLNGITRALI----------RAVKELEEDAIENGEAL 537
A L +M G+ + IT +I A KEL E+G L
Sbjct: 567 DALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQL 617
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 115/293 (39%), Gaps = 15/293 (5%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I + K G+ + A F + D Y I +L +D A + +M++ G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC---QEDETV 319
D+ II CK G+ E+ ++ L + P + LI C + DE
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534
Query: 320 KLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
KL M+ +KP ++++I C++ + A L +M S G P
Sbjct: 535 KLLASMV--------SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIIT 586
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N ++ + A E+ + G + ++ TY ++ G +EA +
Sbjct: 587 YNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 646
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+L T++ +I K+ D A L + G+ P+V Y+ + ++L
Sbjct: 647 LTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENL 699
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 102/256 (39%), Gaps = 11/256 (4%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEK--EKGV-LTVEILNELIALFSKLGKGKAA 216
V ++L+ ++C ++ WD KE+ + ++G+ L N +I K G+ +
Sbjct: 446 VYNSLIHSLC-------IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES 498
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
++F+ G + TY I+ D A + M+ G PD +I+
Sbjct: 499 EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLING 558
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
+CK + ++A V++ + P ++ L Q T A ++ + +
Sbjct: 559 YCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA-AKELYVGITESGTQL 617
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ ++ ++ LC+ A + + FN +I A K G A ++
Sbjct: 618 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLF 677
Query: 397 KLMRSRGLKPDVYTYT 412
+ + GL PDV TY+
Sbjct: 678 AALSANGLVPDVRTYS 693
>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
Length = 382
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 155/328 (47%), Gaps = 12/328 (3%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
+L+ +C + +D E+ + V++ LI KLG+ AAF++F K
Sbjct: 16 ILQGLCRCGRVAQALEHFDASLELAHAQPDVVS---YTTLINGLCKLGRVDAAFDLFRKM 72
Query: 224 -GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
GC N TY ++ L ++ D A +V + + PD +++ + G+
Sbjct: 73 VAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGR 132
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
EA +T E+ P ++V+F +I+ LC+ AL++ ++ +
Sbjct: 133 VDEALATFTQMTEEGYVP--TLVSFNAIITGLCRARRLAD-ALEVFNEMIDRDFHPNLVT 189
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+S VI LC+ + A+ LL +M+SEG P + ++ +S AG + A+ +L+ M
Sbjct: 190 YSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMV 249
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
S+G PDV TYT ++ G++++A EI E N + VTY LI GYC+ D
Sbjct: 250 SQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVD 309
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSL 488
K++ EM +PNV YN +I L
Sbjct: 310 EGGKVMREM---ACRPNVVTYNTMIWGL 334
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 164/343 (47%), Gaps = 8/343 (2%)
Query: 182 DIVKEIGEKEKGV-LTVEILNELIALFSKLGK-GKA--AFEVFNKFGDYGCVANQETYYF 237
DI++++ K +GV V N LI + K+GK GK A + + G N+ T+
Sbjct: 184 DIIEDM--KVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNI 241
Query: 238 TIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKK 297
I+ + K A V +M G P+ +I+ C GK EA +
Sbjct: 242 LIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSC 301
Query: 298 MYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGA 357
+ P L++ C+ ++ VK A ++ DD + + ++ +I + C+ +++ A
Sbjct: 302 LKPNIITHNALLNGFCK-NKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDA 360
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
L M+ +G P + +N +I+ + GD+ A ++ M ++ LK D+ TY L+
Sbjct: 361 FALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDS 420
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
N G+M++A +L+E + + S +TY+T+I GYCK AL L ++M+ VG N
Sbjct: 421 LCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLAN 480
Query: 478 VDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
V YN LI+ C K A LL +M KGL N +T ++
Sbjct: 481 VATYNVLIKGFCKKD-KLEDANGLLNEMLEKGLIPNRMTYEIV 522
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 157/331 (47%), Gaps = 6/331 (1%)
Query: 154 KWVTSGVV--DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEI-LNELIALFSKL 210
+ V++ V+ + L+ C ++Y I+KE+ + G+ E+ N LI F K
Sbjct: 192 RGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEM--RADGICPNEVTFNILIDGFCKD 249
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
AA +VF + G N TY I L + A ++ ++M+ + P+
Sbjct: 250 KNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITH 309
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
+++ FCK K+A ++ ++ + P + LI + C+ DE ++ A +
Sbjct: 310 NALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCK-DENMEDAFALYRIML 368
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
G+ + ++ +I LCR D+ A+ L+S+M ++ +N +I + G+M
Sbjct: 369 GKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMK 428
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A+ +L M +GLKP TY ++ GY G + A + ++ +K + TY+ LI
Sbjct: 429 KALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLI 488
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEY 481
+G+CK ++ + A LLNEM + G+ PN Y
Sbjct: 489 KGFCKKDKLEDANGLLNEMLEKGLIPNRMTY 519
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 146/327 (44%), Gaps = 9/327 (2%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSR-RKIFDWAWSVCEK 257
I++ L+ ++K + + FE F + DYG + + + L + +I D + V ++
Sbjct: 95 IVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEF-VYKE 153
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
MI P +I+ CK GK +A + + + + LI C+ +
Sbjct: 154 MIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGK 213
Query: 318 TVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
K+ D E R I P F+ +I C+ K+V A + ++M +G P
Sbjct: 214 IGKMY--KADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNV 271
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+NS+I+ G + A + M + LKP++ T+ L++G+ +++A E+ ++
Sbjct: 272 VTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDD 331
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
K + TY+ LI YCK E + A L M GV P+V YN LI LC K
Sbjct: 332 MPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKG- 390
Query: 494 DWRTAEKLLEDMRLKGLHLNGITRALI 520
D A L+ +M K L + IT ++
Sbjct: 391 DLEAARNLVSEMDTKHLKADLITYNIL 417
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 152/327 (46%), Gaps = 5/327 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
++++ CSS KE + G E V+T N L+ K G+ A ++F+
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDG-VEPDVVTY---NSLMDYLCKNGRCTEARKMFD 328
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G TY ++ + + + + M+ G P+ +I + K G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
K +A +V++ R++ + P +I LC+ V+ A+ + E +
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGR-VEDAMRYFEQMIDERLSPGNIVY 447
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+S+I SLC AK L+ +M+ G FNS+I ++ K G + + ++ LM
Sbjct: 448 NSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVR 507
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+KPD+ TY+ L+ GY G+M+EA ++L + VTY+TLI GYCK+ +
Sbjct: 508 IGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMED 567
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSL 488
AL L EM+ GV P++ YN ++Q L
Sbjct: 568 ALVLFREMESSGVSPDIITYNIILQGL 594
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 152/335 (45%), Gaps = 17/335 (5%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILN--ELIALFSKLGKGKAAFEV 219
+ LLK +C +E L ++ + G G ++++ +I F K G A+
Sbjct: 166 NILLKGLCDDNRSQEALELLQMMPDDG----GDCPPDVVSYTTVINGFFKEGDLDKAYGT 221
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
+++ D G + N TY I AL + + D A V M++ G +P+ I+ +C
Sbjct: 222 YHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCS 281
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
G+ KEA + P L+ LC+ + A M D + K I
Sbjct: 282 SGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTE-ARKMFDSMTKRGLKPEIT 340
Query: 340 PFSSVIRSLCR---MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ ++++ + ++HG LL M+ G P + VF+ +I AY+K G + AM +
Sbjct: 341 TYGTLLQGYATKGALVEMHG---LLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYC 454
MR +GL PD TY ++ G++E+A + RLSP + Y++LI C
Sbjct: 398 SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMID--ERLSPGNIVYNSLIHSLC 455
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+++D A +L+ EM D G+ + +N +I S C
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 143/304 (47%), Gaps = 15/304 (4%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G N + I A +++ D A V KM + G PD+ G +I CK G+ ++A
Sbjct: 369 GIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDA 428
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLC---QEDETVKLALDMLDDFSGEARKYAIKP--F 341
+ ++++ P V LI SLC + D+ +L L+MLD R + F
Sbjct: 429 MRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLD------RGICLDTIFF 482
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+S+I S C+ V ++ L M+ G P ++++I Y AG M A ++L M S
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 542
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+KPD TY L++GY +ME+A + E + + +TY+ +++G +
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 602
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD---WRTAEKL-LEDMRLKGLHLNGITR 517
A +L + + G Q + YN ++ LC L R + L L D++L+ N +
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 662
Query: 518 ALIR 521
AL++
Sbjct: 663 ALLK 666
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 120/273 (43%), Gaps = 3/273 (1%)
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGS--LPDSEKVGKIISW 276
V + GC+ N +Y ++ L A + + M + G PD +I+
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
F K G +A+ Y ++ + P + +I++LC+ K A+++L
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDK-AMEVLTSMVKNGVMP 267
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ ++S++ C A L KM S+G P +NS++ K G T A +M
Sbjct: 268 NCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMF 327
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
M RGLKP++ TY L+ GYA G + E +L+ +N + + LI Y K
Sbjct: 328 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQ 387
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ D A+ + ++M+ G+ P+ Y +I LC
Sbjct: 388 GKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC 420
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 163/395 (41%), Gaps = 30/395 (7%)
Query: 158 SGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVL-TVEILNELIALFSKLGKGKAA 216
S ++ AL KA K + L +VK GV+ N ++ + G+ K A
Sbjct: 238 SSIIAALCKA---QAMDKAMEVLTSMVK------NGVMPNCRTYNSIVHGYCSSGQPKEA 288
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
K G + TY ++ L + A + + M + G P+ G ++
Sbjct: 289 IGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQG 348
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
+ G E H + L ++P V + LI + ++ + + L FS + R+
Sbjct: 349 YATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLV----FS-KMRQQ 403
Query: 337 AIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
+ P + +VI LC+ V A +MI E PGN V+NS+I + A
Sbjct: 404 GLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKA 463
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
E++ M RG+ D + ++ + G++ E+ ++ + + + +TY TLI G
Sbjct: 464 KELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDG 523
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
YC + D A KLL M VG++P+ YN LI C K A L +M G+
Sbjct: 524 YCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC-KISRMEDALVLFREMESSGVSP 582
Query: 513 NGITRALI----------RAVKELEEDAIENGEAL 537
+ IT +I A KEL E+G L
Sbjct: 583 DIITYNIILQGLFQTRRTAAAKELYVGITESGTQL 617
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 134/307 (43%), Gaps = 12/307 (3%)
Query: 215 AAFEVFNKFGDYGC---VANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVG 271
AA +N+ G N TY + + D ++ +I+ G + D+
Sbjct: 71 AAVSRYNRMARAGADEVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFT 130
Query: 272 KIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQED---ETVKLALDML 326
++ C + +A + L R ++ +V ++ L+ LC ++ E ++L L M+
Sbjct: 131 PMLKGLCADKRTSDAMDI-VLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALEL-LQMM 188
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
D G+ + +++VI + D+ A +M+ G P ++S+I+A KA
Sbjct: 189 PDDGGDCPPDVVS-YTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKA 247
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
M AME+L M G+ P+ TY ++ GY + GQ +EA L + + VTY
Sbjct: 248 QAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTY 307
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
++L+ CK A K+ + M G++P + Y L+Q K LL+ M
Sbjct: 308 NSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA-LVEMHGLLDLMV 366
Query: 507 LKGLHLN 513
G+H N
Sbjct: 367 RNGIHPN 373
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 115/293 (39%), Gaps = 15/293 (5%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I + K G+ + A F + D Y I +L +D A + +M++ G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC---QEDETV 319
D+ II CK G+ E+ ++ L + P + LI C + DE
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534
Query: 320 KLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
KL M+ +KP ++++I C++ + A L +M S G P
Sbjct: 535 KLLASMV--------SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIIT 586
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N ++ + A E+ + G + ++ TY ++ G +EA +
Sbjct: 587 YNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 646
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+L T++ +I K+ D A L + G+ P+V Y+ + ++L
Sbjct: 647 LTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENL 699
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 102/256 (39%), Gaps = 11/256 (4%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEK--EKGV-LTVEILNELIALFSKLGKGKAA 216
V ++L+ ++C ++ WD KE+ + ++G+ L N +I K G+ +
Sbjct: 446 VYNSLIHSLC-------IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES 498
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
++F+ G + TY I+ D A + M+ G PD +I+
Sbjct: 499 EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLING 558
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
+CK + ++A V++ + P ++ L Q T A ++ + +
Sbjct: 559 YCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA-AKELYVGITESGTQL 617
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ ++ ++ LC+ A + + FN +I A K G A ++
Sbjct: 618 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLF 677
Query: 397 KLMRSRGLKPDVYTYT 412
+ + GL PDV TY+
Sbjct: 678 AALSANGLVPDVRTYS 693
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 166/361 (45%), Gaps = 10/361 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEK-GVL-TVEILNELIALFSKLGKGKAAFEV 219
+ L++ CS VG+ L + GE E+ G L V N LI + K+G+ AF +
Sbjct: 218 NILIRGFCS-VGE-----LQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 271
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
G N +Y I L R AW + E+M G PD +++ +CK
Sbjct: 272 LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCK 331
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
G +A V++ + P LI+S+C+ + A++ D + +
Sbjct: 332 EGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKA-RNLNRAMEFFDQMRIRGLRPNER 390
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
++++I R ++ A +L++M G P +N+ I + M A+ +++ M
Sbjct: 391 TYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEM 450
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
+GL PDV +Y+ ++SG+ G+++ A ++ E + VTY +LI+G C++
Sbjct: 451 VEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRL 510
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRAL 519
A L EM D+G+ P+ Y LI + C++ D A L ++M KG + +T ++
Sbjct: 511 TEACDLSQEMLDMGLPPDEFTYTTLINAYCVEG-DLNKALHLHDEMIHKGFLPDAVTYSV 569
Query: 520 I 520
+
Sbjct: 570 L 570
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 142/271 (52%), Gaps = 3/271 (1%)
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M G LP+ +I +CK G+ EA + K M P +I+ LC+E
Sbjct: 239 EMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREG 298
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
++K A ++L++ + +++++ C+ + H A + ++M+ G P +
Sbjct: 299 -SMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTY 357
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
++I++ KA ++ AME MR RGL+P+ TYT L+ G++ G + EA ILNE +
Sbjct: 358 TALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTE 417
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ S VTY+ I G+C LE + AL ++ EM + G+ P+V Y+ +I C K +
Sbjct: 418 SGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKG-ELD 476
Query: 497 TAEKLLEDMRLKGLHLNGIT-RALIRAVKEL 526
A ++ ++M KG+ + +T +LI+ + E+
Sbjct: 477 RAFQMKQEMVEKGVSPDAVTYSSLIQGLCEM 507
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 93/176 (52%), Gaps = 1/176 (0%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+ ++ +IR C + ++ +M G P +N++I AY K G + A +LK
Sbjct: 214 VYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLK 273
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M S+G++P++ +Y +++G G M+EA EIL E VTY+TL+ GYCK
Sbjct: 274 SMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEG 333
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
F AL + EM GV P+V Y LI S+C KA + A + + MR++GL N
Sbjct: 334 NFHQALVIHAEMVRNGVSPSVVTYTALINSMC-KARNLNRAMEFFDQMRIRGLRPN 388
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 131/307 (42%), Gaps = 27/307 (8%)
Query: 205 ALFSKLGKGK---AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET 261
AL + + K + A E F++ G N+ TY I+ SR+ + + A+ + +M E+
Sbjct: 359 ALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTES 418
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
G P I C + +EA V EK + P + +IS C++ E
Sbjct: 419 GFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGE---- 474
Query: 322 ALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
LD E + + P +SS+I+ LC M+ + A L +M+ G PP +
Sbjct: 475 -LDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYT 533
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
++I+AY GD+ A+ + M +G PD TY+ L++G + EA +L +
Sbjct: 534 TLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYE 593
Query: 438 HSRLSPVTYHT---------------LIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
S S VTY T LI+G+C A ++ M + +P YN
Sbjct: 594 ESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYN 653
Query: 483 KLIQSLC 489
+I C
Sbjct: 654 VIIHGHC 660
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 97/179 (54%), Gaps = 5/179 (2%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA-GDMTPAMEML--K 397
F +++S + + A ++ S G PG +NSV+ A ++ G + + E + +
Sbjct: 145 FDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYRE 204
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
++RSR + P+VYTY L+ G+ + G++++ E ++N + VTY+TLI YCK+
Sbjct: 205 MIRSR-VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMG 263
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
D A LL M G+QPN+ YN +I LC + + A ++LE+M KG + +T
Sbjct: 264 RIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREG-SMKEAWEILEEMGYKGFTPDEVT 321
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 115/293 (39%), Gaps = 22/293 (7%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I+ F + G+ AF++ + + G + TY I+ L + A + ++M++ G
Sbjct: 465 IISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMG 524
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV--- 319
PD +I+ +C G +A ++ K P + LI+ L ++ T
Sbjct: 525 LPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAK 584
Query: 320 KLALDML-----------DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
+L ++ D K ++I+ C +H A + M+
Sbjct: 585 RLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERN 644
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
PG AV+N +I + + G++ A + K M G P T L+ G EE
Sbjct: 645 HKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMS 704
Query: 429 EI----LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
E+ L + N + L+ V L+ K + L +L +M G+ PN
Sbjct: 705 EVIGDTLRSCRLNEAELAKV----LVEINHKEGNMEAVLNVLTDMAKDGLLPN 753
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 143/297 (48%), Gaps = 3/297 (1%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A ++F++ G + + +TY I L + + A + EKM + D G II
Sbjct: 1035 AVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKM-KGNCKGDVFTYGMIID 1093
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
CK G EA +++ + P V + L+ LC+ +K AL+ + G
Sbjct: 1094 ALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGR-LKEALEFFKEMEGRGIS 1152
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+ ++S+I L R L+ M+ G P F +I K G + A ++
Sbjct: 1153 ADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQI 1212
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
L+LMR +G +PD+ TY LM+G GQ+E+A ++ +L+ +Y+ LI GYCK
Sbjct: 1213 LELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCK 1272
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
++ D A + EM+ G++P+ YN LI +LC ++ RTA+KL +M+ G L
Sbjct: 1273 DQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALC-QSGRVRTAQKLFVEMQTCGQFL 1328
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 155/348 (44%), Gaps = 4/348 (1%)
Query: 193 GVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWA 251
G+L V + + L+ + G+ K A E F + G A+ TY I LSR ++
Sbjct: 1115 GILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEV 1174
Query: 252 WSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISS 311
M++ G PD+ +I CK GK EA + L R K P L++
Sbjct: 1175 TWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNG 1234
Query: 312 LCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
LC + ++ A + + + K + ++ +I C+ + + A +M +G P
Sbjct: 1235 LCLVGQ-LEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKP 1293
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+N++I A ++G + A ++ M++ G + TY L+ G G +EEA ++
Sbjct: 1294 STVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLF 1353
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
KK + + + L+ G C+ + + A K +E+ G++P+ YN LI LC K
Sbjct: 1354 QSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNK 1413
Query: 492 ALDWRTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIENGEALVE 539
+ A KLL M KG + IT +I L+E+ I L+E
Sbjct: 1414 GM-LSEAVKLLWQMEEKGCLPDSITFNVI-IQNLLKENEIHEAIQLLE 1459
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 75/192 (39%), Gaps = 38/192 (19%)
Query: 335 KYAIKPFSSVIRSLCR--MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
K ++ PF +R CR + ++ A L + + P P FN ++++ +K G +
Sbjct: 906 KASLSPFERYVRDQCRFGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTV 965
Query: 393 MEMLKLMRSRGLKPDVYTY-----------------------------------TGLMSG 417
M + + G++PD+YT T L+ G
Sbjct: 966 FPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKG 1025
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
+ +A ++ +E K TY LI G CK + A+KL +MK + +
Sbjct: 1026 VWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKG-NCKGD 1084
Query: 478 VDEYNKLIQSLC 489
V Y +I +LC
Sbjct: 1085 VFTYGMIIDALC 1096
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 171/378 (45%), Gaps = 9/378 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ A C +E + L D + G K V N +I K GK A V +
Sbjct: 136 NTLINAYCRQGLLEEAFELMDSMSGKGLKP----CVFTYNAIINGLCKTGKYLRAKGVLD 191
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ G + TY + R A + ++M G +PD +I K G
Sbjct: 192 EMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNG 251
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+A + + + P + LI C+ + + AL + D+ + + +
Sbjct: 252 CLDQALKYFRDMKNAGLAPDNVIYTILIGGFCR-NGVMSEALKVRDEMLEQGCVLDVVTY 310
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
++++ LC+ K + A L ++M G P F ++I+ YSK G+M A+ + ++M
Sbjct: 311 NTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQ 370
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
R LKPDV TY L+ G+ G +ME+ E+ N+ + ++Y LI GYC +
Sbjct: 371 RNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSE 430
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALI 520
A +L +EM + G + + N +++ C +A + A++ L +M LKG+ +GIT LI
Sbjct: 431 AFRLWDEMVEKGFEATIITCNTIVKGYC-RAGNAVKADEFLSNMLLKGIVPDGITYNTLI 489
Query: 521 RAVKELEEDAIENGEALV 538
++E+ ++ ALV
Sbjct: 490 NGF--IKEENMDRAFALV 505
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 142/303 (46%), Gaps = 10/303 (3%)
Query: 190 KEKGV-LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
K KG+ +++ N L+ K+G A+E++ + G N T I AL + +
Sbjct: 54 KSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKI 113
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
+ S M E G PD +I+ +C+ G +EA + K + P +
Sbjct: 114 ENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAI 173
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKM 364
I+ LC+ + ++ A +LD E K + P ++ ++ CR ++ A+ + +M
Sbjct: 174 INGLCKTGKYLR-AKGVLD----EMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEM 228
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
S+G P F+++I SK G + A++ + M++ GL PD YT L+ G+ G M
Sbjct: 229 PSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVM 288
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
EA ++ +E + L VTY+T++ G CK + A +L EM + GV P+ + L
Sbjct: 289 SEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTL 348
Query: 485 IQS 487
I
Sbjct: 349 ING 351
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 127/287 (44%), Gaps = 5/287 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F + G A +V ++ + GCV + TY + L + K+ A + +M E G
Sbjct: 278 LIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 337
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD +I+ + K G +A ++ + ++ + P LI C+ E K+
Sbjct: 338 VFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVN 397
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++ +D + +I C M V A L +M+ +G N+++
Sbjct: 398 -ELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKG 456
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y +AG+ A E L M +G+ PD TY L++G+ M+ A ++N K +S L
Sbjct: 457 YCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVN--KMENSGLL 514
Query: 443 P--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
P +TY+ ++ G+ + A ++ +M + GV P+ Y LI
Sbjct: 515 PDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLING 561
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 99/206 (48%), Gaps = 9/206 (4%)
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
V LA ++ + + + + +I +LC+ + + K+ LS M +G P +N+
Sbjct: 78 VDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNT 137
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I+AY + G + A E++ M +GLKP V+TY +++G G+ A +L+E K
Sbjct: 138 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIG 197
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL----CLKALD 494
TY+ L+ C+ + A ++ +EM GV P++ ++ LI L CL
Sbjct: 198 MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQ-- 255
Query: 495 WRTAEKLLEDMRLKGLHLNGITRALI 520
A K DM+ GL + + ++
Sbjct: 256 ---ALKYFRDMKNAGLAPDNVIYTIL 278
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 113/279 (40%), Gaps = 37/279 (13%)
Query: 191 EKG-VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
E+G VL V N ++ K A E+F + + G + T+ I S+ +
Sbjct: 300 EQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMN 359
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A ++ E MI+ PD +I FCKG + ++ + ++ +++YP LI
Sbjct: 360 KAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILI 419
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
+ C V A + D+ + + I +++++ CR + A LS M+ +G
Sbjct: 420 NGYCNMG-CVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGI 478
Query: 370 PPGNAVFNSVISAY-----------------------------------SKAGDMTPAME 394
P +N++I+ + S+ G M A
Sbjct: 479 VPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAEL 538
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
++ M RG+ PD TYT L++G+ ++EA + +E
Sbjct: 539 IMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDE 577
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 85/174 (48%), Gaps = 1/174 (0%)
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+I +S++ L ++ V A + +++ G N +I+A K + L
Sbjct: 61 SINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFL 120
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
M +G+ PDV TY L++ Y G +EEA E+++ + TY+ +I G CK
Sbjct: 121 SDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKT 180
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
++ A +L+EM +G+ P+ YN L+ C + + AE++ ++M +G+
Sbjct: 181 GKYLRAKGVLDEMLKIGMSPDTATYNILLVE-CCRNDNMMDAERIFDEMPSQGV 233
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 124/348 (35%), Gaps = 54/348 (15%)
Query: 190 KEKGVLTVEILNELIALFSKLGKGKAAF-----------------EVFNKFGDYGCVANQ 232
++ GV VEI+ L+ + G F E F G +
Sbjct: 3 RKSGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSI 62
Query: 233 ETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTL 292
+ L + D AW + ++++ +G + + +I+ CK K + +
Sbjct: 63 NACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSD 122
Query: 293 AREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMK 352
EK ++P + ++++I + CR
Sbjct: 123 MEEKGVFPD------------------------------------VVTYNTLINAYCRQG 146
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT 412
+ A L+ M +G P +N++I+ K G A +L M G+ PD TY
Sbjct: 147 LLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYN 206
Query: 413 GLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
L+ M +A I +E V++ LI K D ALK +MK+
Sbjct: 207 ILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNA 266
Query: 473 GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
G+ P+ Y LI C + A K+ ++M +G L+ +T I
Sbjct: 267 GLAPDNVIYTILIGGFCRNGV-MSEALKVRDEMLEQGCVLDVVTYNTI 313
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 6/162 (3%)
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
VF+ ++ Y +A + E ++++S+GL + L+ G G ++ A EI E
Sbjct: 29 VFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEV 88
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
++ +++ T + +I CK ++ + L++M++ GV P+V YN LI + C + L
Sbjct: 89 VRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL- 147
Query: 495 WRTAEKLLEDMRLKGLH-----LNGITRALIRAVKELEEDAI 531
A +L++ M KGL N I L + K L +
Sbjct: 148 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGV 189
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 80/207 (38%), Gaps = 1/207 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI F K + + E++N N +Y I A+ + ++M+E
Sbjct: 381 NTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVE 440
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G I+ +C+ G A +A + K + P LI+ +E E +
Sbjct: 441 KGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKE-ENMD 499
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A +++ + ++ ++ R + A+ ++ KMI G P + + S+I
Sbjct: 500 RAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLI 559
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPD 407
+ + ++ A + M RG PD
Sbjct: 560 NGHVTQNNLKEAFRVHDEMLQRGFVPD 586
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 143/297 (48%), Gaps = 3/297 (1%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A ++F++ + G + +TY I L + + A + EKM + D G II
Sbjct: 96 AVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKM-KGNCKGDVFTYGMIID 154
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
CK G EA +++ + P V + L+ LC+ +K AL+ + G
Sbjct: 155 SLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGR-LKEALEFFKEMEGRGIS 213
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+ ++S+I L R L+ M+ G P F +I K G + A ++
Sbjct: 214 ADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQI 273
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
L+LM +G +PD+ TY LM+G GQ+E+A ++ +L+ +Y+ LI GYCK
Sbjct: 274 LELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCK 333
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
++ D A +L EM+ G++P+ YN LI +LC ++ RTA+KL +M+ G L
Sbjct: 334 DQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALC-QSGRVRTAQKLFVEMQTCGQFL 389
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 155/348 (44%), Gaps = 4/348 (1%)
Query: 193 GVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWA 251
G+L V + + L+ + G+ K A E F + G A+ TY I LSR ++
Sbjct: 176 GILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEV 235
Query: 252 WSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISS 311
M++ G PD+ +I CK GK EA + L K P L++
Sbjct: 236 TWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNG 295
Query: 312 LCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
LC + ++ A + + + K + ++ +I C+ + + A L +M +G P
Sbjct: 296 LCLVGQ-LEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKP 354
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+N++I A ++G + A ++ M++ G + TY L+ G G +EEA ++
Sbjct: 355 STVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLF 414
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
KK + + + L+ G C+ + + A K +E+ G++P+ YN LI LC K
Sbjct: 415 QSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNK 474
Query: 492 ALDWRTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIENGEALVE 539
+ A KLL M KG + IT +I L+E+ I L+E
Sbjct: 475 GM-LSEAVKLLWQMEEKGCLPDSITFNVI-IQNLLKENEIHEAIQLLE 520
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 122/266 (45%), Gaps = 9/266 (3%)
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH 287
C + TY I++L + + A + +MI G LPD ++ C+ G+ KEA
Sbjct: 142 CKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEAL 201
Query: 288 VVYTLAREKKM----YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
+ + + Y S++ L + ++ T L L + FS +A + I
Sbjct: 202 EFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTI----- 256
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
+I LC+ V A+ +L M +G P +N++++ G + A ++ + + RG
Sbjct: 257 LIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRG 316
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
+K +V++Y L++GY +++EA + E + + S VTY+TLI C+ A
Sbjct: 317 IKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQ 376
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLC 489
KL EM+ G + Y L+ LC
Sbjct: 377 KLFVEMQTCGQFLKLSTYCVLLDGLC 402
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
RG +PD T T L+ G + +A ++ +E + TY LI G CK +
Sbjct: 71 RGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGL 130
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A+KL +MK + +V Y +I SLC
Sbjct: 131 AIKLHEKMKG-NCKGDVFTYGMIIDSLC 157
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 154/323 (47%), Gaps = 10/323 (3%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
++ N L+ +LG+ +A VF++ G ++ I + R D A ++ +
Sbjct: 117 KLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRR 176
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M E G PD G +I C+ G+ ++A V+ + M P V LI + C++ +
Sbjct: 177 MSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGD 236
Query: 318 TVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
A ML+ E R+ ++P +++++ LCR +D+ A ++ +M S G P
Sbjct: 237 ----AETMLE-LHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDT 291
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+ ++I Y K ++ AME+ + M + G+ D TYT L+SG + G+ +A +L E
Sbjct: 292 VTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGE 351
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
+ TY +I +C+ + L+LL EM++ G +P V YN ++ C K
Sbjct: 352 MMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFC-KLG 410
Query: 494 DWRTAEKLLEDMRLKGLHLNGIT 516
+ A+ LL M G+ + IT
Sbjct: 411 QMKNADMLLNAMINIGVSPDDIT 433
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 138/306 (45%), Gaps = 52/306 (16%)
Query: 248 FDWAWSVCE---KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSV 304
F A C ++++ G P+++ ++ + G+ A V+ + + + ++V
Sbjct: 94 FPTAPEACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVR--RTV 151
Query: 305 VAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAK 358
V+F +IS +C+ + LD + + + P + ++I+ LCR+ + A+
Sbjct: 152 VSFNTMISGMCRAGD-----LDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDAR 206
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+ KM G P VF +I A+ K GD +E+ + MR RG++PD TY +++G
Sbjct: 207 GVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGL 266
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL--------------- 463
++ A I+ E + R VTY TLI GYCK EE D A+
Sbjct: 267 CRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDE 326
Query: 464 --------------------KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
++L EM + G++P+ Y +I + C K D +T +LL+
Sbjct: 327 VTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKG-DVKTGLRLLK 385
Query: 504 DMRLKG 509
+M+ KG
Sbjct: 386 EMQNKG 391
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 117/253 (46%), Gaps = 1/253 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI ++G+ + A VF K G N + I+A ++ + + +M E G
Sbjct: 192 LIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERG 251
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD+ I++ C+ K A + R + P LI C+E+E + +A
Sbjct: 252 VRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEE-LDMA 310
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+++ + E ++++I L + A+ +L +M+ G P N + VI A
Sbjct: 311 MEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDA 370
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ + GD+ + +LK M+++G KP V TY +M+G+ GQM+ A +LN
Sbjct: 371 FCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPD 430
Query: 443 PVTYHTLIRGYCK 455
+TY+ L+ G+CK
Sbjct: 431 DITYNILLDGHCK 443
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 68/165 (41%), Gaps = 33/165 (20%)
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG--------------------- 421
Y++ G + A ++ L RG++ + + TGLMS +
Sbjct: 59 YAEEGLLPDACTLVLLALRRGIRLEPTSCTGLMSRFPTAPEACAFYLQLLDAGLPPEAKL 118
Query: 422 -----------GQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
G++ A + +E + R + V+++T+I G C+ + D A L M
Sbjct: 119 FNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMS 178
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
+ GV P+V Y LIQ LC + A + E M +G+ N +
Sbjct: 179 EAGVTPDVYTYGALIQGLC-RVGRIEDARGVFEKMCGRGMKPNAV 222
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 153/384 (39%), Gaps = 70/384 (18%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
TV N +I + K GK K A + + G N TY I R + A V
Sbjct: 235 TVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVL 294
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+ M G PDS G +IS CKGGK +EA + +E + P LI C +
Sbjct: 295 DIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNK 354
Query: 316 ----------DETVKLA--------------------LDMLDDFSGEARKYAIKP----F 341
DE V+ A +D D + I P +
Sbjct: 355 GDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITY 414
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMIS----------------------------------- 366
+ +I CR + A L +MIS
Sbjct: 415 NILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIR 474
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
EG P +FN++I + G++ A +LK M R + PD TY LM G G++EE
Sbjct: 475 EGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEE 534
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A E+L E K+ R ++Y+TLI GY K + + A + +EM +G P + YN LIQ
Sbjct: 535 ARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQ 594
Query: 487 SLCLKALDWRTAEKLLEDMRLKGL 510
LC K AE+LL++M KG+
Sbjct: 595 GLC-KNQQGDLAEELLKEMVSKGI 617
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 124/248 (50%), Gaps = 2/248 (0%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
+I C+ + +A + + +EK + P ++S + ++T + + + F +
Sbjct: 172 LIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLK 231
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
K + F+ +I LC+ + AK + M + G P +N+VI Y G + A
Sbjct: 232 I-KSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGA 290
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
+L +M++RG++PD YTY L+SG GG++EEA IL + K+ + VTY+TLI G
Sbjct: 291 RMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDG 350
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
YC + A +EM + P V YN LI +L L+ A+ +++DM G+
Sbjct: 351 YCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEG-KMDEADGMIKDMGDSGIVP 409
Query: 513 NGITRALI 520
+ IT ++
Sbjct: 410 DSITYNIL 417
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 134/312 (42%), Gaps = 20/312 (6%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
I A K D A+ + M E G +P E ++S F K + + V+Y K+
Sbjct: 173 IRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKI 232
Query: 299 YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDV 354
+I+ LC+E + L DF G +KP +++VI C V
Sbjct: 233 KSTVYTFNIMINVLCKEGK-----LKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRV 287
Query: 355 HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
GA+ +L M + G P + + S+IS K G + A +L+ M+ GL P TY L
Sbjct: 288 EGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTL 347
Query: 415 MSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV 474
+ GY N G + +A +E + + TY+ LI + D A ++ +M D G+
Sbjct: 348 IDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGI 407
Query: 475 QPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT----------RALIRAVK 524
P+ YN LI C + + + A L ++M KG+ +T R ++A
Sbjct: 408 VPDSITYNILINGYC-RCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAAD 466
Query: 525 ELEEDAIENGEA 536
+L E I G +
Sbjct: 467 DLFEKIIREGAS 478
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 118/252 (46%), Gaps = 15/252 (5%)
Query: 183 IVKEIGEKEKGVLTVEIL-NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEA 241
++K++G+ G++ I N LI + + G K AF + ++ G TY I
Sbjct: 398 MIKDMGDS--GIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYV 455
Query: 242 LSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPP 301
LS+R A + EK+I G+ PD +I C G A + ++ + P
Sbjct: 456 LSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPD 515
Query: 302 QSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGA 357
+ L+ C+E + V+ A ++L E ++ I+P ++++I + D++ A
Sbjct: 516 EVTYNTLMQGRCREGK-VEEARELLK----EMKRRGIRPDHISYNTLISGYSKRGDINDA 570
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
T+ +M+S G P +N++I K A E+LK M S+G+ PD TY L+ G
Sbjct: 571 FTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEG 630
Query: 418 YANGGQMEEACE 429
G+++++ E
Sbjct: 631 I---GKVDDSSE 639
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 1/176 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F +IR+ C +K A M +G P FN+++S + K + M
Sbjct: 169 FDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMF 228
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+K VYT+ +++ G++++A + + + + + VTY+T+I GYC +
Sbjct: 229 RLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVE 288
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A +L+ MK+ GV+P+ Y LI +C K A +LE M+ GL +T
Sbjct: 289 GARMVLDIMKNRGVEPDSYTYGSLISGMC-KGGKLEEASGILEKMKEIGLLPTAVT 343
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
VF+ +I A + A E +M+ +G+ P + T+ ++S + Q E + E
Sbjct: 168 VFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEM 227
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
+ + + T++ +I CK + A + M+++GV+PNV YN +I C +
Sbjct: 228 FRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRG-R 286
Query: 495 WRTAEKLLEDMRLKGL 510
A +L+ M+ +G+
Sbjct: 287 VEGARMVLDIMKNRGV 302
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 143/310 (46%), Gaps = 2/310 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
L+ LI F +L + F V K G T+ I L + F A + + M+
Sbjct: 160 LHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMV 219
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
G PD II+ CK G+ A ++ E P + +I SLC+ D V
Sbjct: 220 ARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCK-DRRV 278
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
ALD+ + I ++S+I+ LC A +L++M+S P F+ +
Sbjct: 279 NEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLL 338
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I+ + K G++ A +LK M G++P+V TY+ LM+GY+ ++ EA ++ +
Sbjct: 339 INIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGC 398
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
+ +Y+ LI GYCK + A +L NEM G+ P++ YN LI LC + R A
Sbjct: 399 KPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLC-QLGRLREAH 457
Query: 500 KLLEDMRLKG 509
L ++M G
Sbjct: 458 DLFKNMLTNG 467
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 165/387 (42%), Gaps = 55/387 (14%)
Query: 195 LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSV 254
LT+ N LI K+GK A E+F+ G + TY I L + A +
Sbjct: 190 LTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGL 249
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
KM E G PD II CK + EA +++ + K + P LI LC
Sbjct: 250 FRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCN 309
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
+ A ML++ I FS +I C+ +V A+ +L M G P
Sbjct: 310 FSRW-REASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVV 368
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
++S+++ YS ++ A ++ +M ++G KPDV++Y L++GY ++ EA ++ NE
Sbjct: 369 TYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEM 428
Query: 435 KKNHSRLSP--VTYHTLIRGYCKL----EEFDC--------------------------- 461
H L+P V+Y+TLI G C+L E D
Sbjct: 429 I--HQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQG 486
Query: 462 ----ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN---- 513
A +L M+ ++PN+ YN LI ++C K+ + + A KL ++ ++GL N
Sbjct: 487 YLAKAFRLFRAMQSTYLKPNMVMYNILIDAMC-KSRNLKEARKLFSELFVQGLQPNVQIY 545
Query: 514 ----------GITRALIRAVKELEEDA 530
G+ + A + +EED
Sbjct: 546 TTIINGLCKEGLLDEALEAFRNMEEDG 572
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 101/426 (23%), Positives = 172/426 (40%), Gaps = 78/426 (18%)
Query: 156 VTSGVVDALLKAICSSVGK-KEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGK 214
+T + L+ +C VGK + L+D + G + I+N L K+G+
Sbjct: 190 LTIVTFNTLINGLCK-VGKFGQAVELFDDMVARGYQPDVHTYTTIINGL----CKIGETV 244
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRRK-------IFDW----------------- 250
AA +F K G+ GC + TY I++L + + IF +
Sbjct: 245 AAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLI 304
Query: 251 -----------AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
A ++ +M+ +P+ +I+ FCK G EA V E +
Sbjct: 305 QGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVE 364
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P + L++ + E V+ A + D + K + ++ +I C+ K + AK
Sbjct: 365 PNVVTYSSLMNGYSLQAEVVE-ARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQ 423
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
L ++MI +G P +N++I + G + A ++ K M + G PD+ TY+ L+ G+
Sbjct: 424 LFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFC 483
Query: 420 NGGQMEEACEI----------------------------LNEAKKNHSRL-------SPV 444
G + +A + L EA+K S L +
Sbjct: 484 KQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQ 543
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLED 504
Y T+I G CK D AL+ M++ G PN YN +I+ L+ D A +L+ +
Sbjct: 544 IYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGF-LQHKDESRAVQLIGE 602
Query: 505 MRLKGL 510
MR KG
Sbjct: 603 MREKGF 608
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 127/293 (43%), Gaps = 2/293 (0%)
Query: 240 EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
+A S R I D A + M+ P + K++S K +A + + E
Sbjct: 95 DASSFRNI-DDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGL 153
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P + ++ + + + V L +L + I F+++I LC++ A
Sbjct: 154 SPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVE 213
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
L M++ G P + ++I+ K G+ A + + M G +PDV TY+ ++
Sbjct: 214 LFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLC 273
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
++ EA +I + K + TY++LI+G C + A +LNEM + + PN+
Sbjct: 274 KDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIV 333
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIE 532
++ LI C K + A +L+ M G+ N +T + + L+ + +E
Sbjct: 334 TFSLLINIFC-KEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVE 385
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 123/283 (43%), Gaps = 15/283 (5%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYY-------FTIEALSRRKIFDWAWSVC 255
LI +F K G A V + G N TY E + RK+FD
Sbjct: 338 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDV----- 392
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
MI G PD +I+ +CK + EA ++ + + P LI LCQ
Sbjct: 393 --MITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQL 450
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
++ A D+ + + +S ++ C+ + A L M S P +
Sbjct: 451 GR-LREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVM 509
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N +I A K+ ++ A ++ + +GL+P+V YT +++G G ++EA E +
Sbjct: 510 YNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNME 569
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
++ + +Y+ +IRG+ + ++ A++L+ EM++ G +V
Sbjct: 570 EDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADV 612
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 1/210 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI + K + A ++FN+ G + +Y I+ L + A + + M+
Sbjct: 406 NILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLT 465
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G+LPD ++ FCK G +A ++ + + P + LI ++C+ +K
Sbjct: 466 NGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKS-RNLK 524
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A + + + + ++ ++++I LC+ + A M +G PP +N +I
Sbjct: 525 EARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVII 584
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ + D + A++++ MR +G DV T
Sbjct: 585 RGFLQHKDESRAVQLIGEMREKGFVADVAT 614
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 153/323 (47%), Gaps = 10/323 (3%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
++ N L+ +LG+ +A VF++ G ++ I + R D A ++ +
Sbjct: 241 KLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRR 300
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M E G PD G +I C+ G+ ++A V+ + M P V LI + C++ +
Sbjct: 301 MSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGD 360
Query: 318 TVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
+ + + E R+ ++P +++++ LCR +D+ A ++ +M S G P
Sbjct: 361 A-----ETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDT 415
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+ ++I Y K ++ AME+ + M + G+ D TYT L+SG + G+ +A +L E
Sbjct: 416 VTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGE 475
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
+ TY +I +C+ + L+LL EM++ G +P V YN ++ C K
Sbjct: 476 MMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFC-KLG 534
Query: 494 DWRTAEKLLEDMRLKGLHLNGIT 516
+ A+ LL M G+ + IT
Sbjct: 535 QMKNADMLLNAMINIGVSPDDIT 557
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 138/306 (45%), Gaps = 52/306 (16%)
Query: 248 FDWAWSVCE---KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSV 304
F A C ++++ G P+++ ++ + G+ A V+ + + + ++V
Sbjct: 218 FPTAPEACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVR--RTV 275
Query: 305 VAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAK 358
V+F +IS +C+ + LD + + + P + ++I+ LCR+ + A+
Sbjct: 276 VSFNTMISGMCRAGD-----LDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDAR 330
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+ KM G P VF +I A+ K GD +E+ + MR RG++PD TY +++G
Sbjct: 331 GVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGL 390
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL--------------- 463
++ A I+ E + R VTY TLI GYCK EE D A+
Sbjct: 391 CRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDE 450
Query: 464 --------------------KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
++L EM + G++P+ Y +I + C K D +T +LL+
Sbjct: 451 VTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKG-DVKTGLRLLK 509
Query: 504 DMRLKG 509
+M+ KG
Sbjct: 510 EMQNKG 515
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 117/253 (46%), Gaps = 1/253 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI ++G+ + A VF K G N + I+A ++ + + +M E G
Sbjct: 316 LIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERG 375
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD+ I++ C+ K A + R + P LI C+E+E + +A
Sbjct: 376 VRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEE-LDMA 434
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+++ + E ++++I L + A+ +L +M+ G P N + VI A
Sbjct: 435 MEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDA 494
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ + GD+ + +LK M+++G KP V TY +M+G+ GQM+ A +LN
Sbjct: 495 FCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPD 554
Query: 443 PVTYHTLIRGYCK 455
+TY+ L+ G+CK
Sbjct: 555 DITYNILLDGHCK 567
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 68/165 (41%), Gaps = 33/165 (20%)
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG--------------------- 421
Y++ G + A ++ L RG++ + + TGLMS +
Sbjct: 183 YAEEGLLPDACTLVLLALRRGIRLEPTSCTGLMSRFPTAPEACAFYLQLLDAGLPPEAKL 242
Query: 422 -----------GQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
G++ A + +E + R + V+++T+I G C+ + D A L M
Sbjct: 243 FNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMS 302
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
+ GV P+V Y LIQ LC + A + E M +G+ N +
Sbjct: 303 EAGVTPDVYTYGALIQGLC-RVGRIEDARGVFEKMCGRGMKPNAV 346
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 147/311 (47%), Gaps = 21/311 (6%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
++E +AL SK+ K CV TY I L + + A+ + E+M+
Sbjct: 97 VDEAVALLSKMRKK--------------CVPTAVTYNSLISGLCKAERASEAYDLLEEMV 142
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+G +PD +I+ FCK K+ +A V+ + P + LI LC+E +
Sbjct: 143 YSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGR-L 201
Query: 320 KLALDMLDDF--SGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
K A+D+ SG + ++S+I CRM + A LL +M G P +
Sbjct: 202 KEAIDLFGRMIKSGSCMPNTVT-YNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYT 260
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
++++ + K + A ++L M +GL PDV T+T LM G ++ +A IL E ++
Sbjct: 261 TLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRK 320
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
+ TY+T++ GYC+ + + A K + E D PNV +N +I+ LC K
Sbjct: 321 SCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD--CPPNVVSFNIMIRGLC-KVNRSSE 377
Query: 498 AEKLLEDMRLK 508
A +L+E+ R +
Sbjct: 378 AMELVEEARRR 388
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 153/331 (46%), Gaps = 10/331 (3%)
Query: 190 KEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
++K V T N LI+ K + A+++ + GC+ + TY I + K D
Sbjct: 108 RKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSD 167
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY-TLAREKKMYPPQSVVAFL 308
A V E+++ G PD +I CK G+ KEA ++ + + P L
Sbjct: 168 DALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSL 227
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
IS C+ + + A+++L+ + + +++++ C++ + A LL++M +G
Sbjct: 228 ISGFCRMGK-MDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKG 286
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P F S++ + ++ A+ +L MR + P VYTY ++ GY Q+EEA
Sbjct: 287 LTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEAR 346
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ + E + V+++ +IRG CK+ A++L+ E + P+V Y +I L
Sbjct: 347 KFMLEEMDCPPNV--VSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGL 404
Query: 489 CL-KALD--WRTAEKLLEDMRLKGLHLNGIT 516
C K +D R K+LE+ G N IT
Sbjct: 405 CREKKVDEACRVYRKMLEE---PGCLPNSIT 432
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 135/294 (45%), Gaps = 12/294 (4%)
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH 287
C A+ TY I+ L + K + A KM+ G PD +I C + EA
Sbjct: 7 CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66
Query: 288 VVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFSSV 344
+ + P LI LC+ DE V L M A Y +S+
Sbjct: 67 KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTY-----NSL 121
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
I LC+ + A LL +M+ G P + ++I+ + K+ A+ + + + +RG
Sbjct: 122 ISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGF 181
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL-SPVTYHTLIRGYCKLEEFDCAL 463
+PDV TY+ L+ G G+++EA ++ K+ S + + VTY++LI G+C++ + D A+
Sbjct: 182 RPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAM 241
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLC-LKALDWRTAEKLLEDMRLKGLHLNGIT 516
LL M + G P+V Y L+ C L LD A LL M KGL + +T
Sbjct: 242 NLLERMAETGSSPDVVTYTTLMNGFCKLARLD--DAYDLLNQMTRKGLTPDVVT 293
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 137/307 (44%), Gaps = 4/307 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K+ + + A K G + TY I AL A E+M
Sbjct: 17 LIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRN 76
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P+ +I CKGG+ EA + + R KK P LIS LC+ E A
Sbjct: 77 LTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR-KKCVPTAVTYNSLISGLCKA-ERASEA 134
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
D+L++ I ++++I C+ K A + ++++ G P ++ +I
Sbjct: 135 YDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDG 194
Query: 383 YSKAGDMTPAMEML-KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
K G + A+++ ++++S P+ TY L+SG+ G+M+EA +L + S
Sbjct: 195 LCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSP 254
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
VTY TL+ G+CKL D A LLN+M G+ P+V + L+ LC + A +
Sbjct: 255 DVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLC-RENRLSDAVHI 313
Query: 502 LEDMRLK 508
L +MR K
Sbjct: 314 LGEMRRK 320
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 135/350 (38%), Gaps = 90/350 (25%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYG-CVANQETYYFTIEALSRRKIFDWAWSVCEKMIET 261
LI K G+ K A ++F + G C+ N TY I R D A ++ E+M ET
Sbjct: 191 LIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAET 250
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
GS PD +++ FCK + +A+ + K + P L+ LC+E+ +
Sbjct: 251 GSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENR-LSD 309
Query: 322 ALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV-F 376
A+ +L GE R+ + P +++++ CR + A+ M+ E P N V F
Sbjct: 310 AVHIL----GEMRRKSCSPTVYTYNTILDGYCRANQLEEARKF---MLEEMDCPPNVVSF 362
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY--------------------------- 409
N +I K + AME+++ R R PDV
Sbjct: 363 NIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLE 422
Query: 410 ---------TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
TY+ L++G N G ++ A RGY +E+
Sbjct: 423 EPGCLPNSITYSTLVTGLCNAGMLDRA-----------------------RGY--IEK-- 455
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
G PN+ YN LI + KA A +LL+DM +G
Sbjct: 456 ------------GCVPNIGTYNLLIDAF-RKANRDEDARELLDDMVQRGF 492
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 143/306 (46%), Gaps = 8/306 (2%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
F G+ AA + N GC N +Y I + A+ + ++M++ G PD
Sbjct: 156 FCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPD 215
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLAL 323
K+I CK G +E+ +++ ++ + P I LC++ DE +L
Sbjct: 216 ILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARL-- 273
Query: 324 DMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAY 383
L+ E + ++++I C+ + A+ L KM++ G P +N++I+ +
Sbjct: 274 --LESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGF 331
Query: 384 SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
KAG M A ++L+ +G PD +TY+ L++G N G M A + EA + + S
Sbjct: 332 CKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSI 391
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
+ Y+TL++G K AL+L+ +M + G P++ YN ++ LC K A +L
Sbjct: 392 ILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLC-KMGCLSDANGILN 450
Query: 504 DMRLKG 509
D KG
Sbjct: 451 DAIAKG 456
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 169/379 (44%), Gaps = 27/379 (7%)
Query: 151 CFFKWVT-SGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEIL--NELIALF 207
C F V+ V+ K C + E Y L+D E K + +IL N+LI +
Sbjct: 177 CEFNAVSYCAVISGFYKENC----QIEAYHLFD------EMLKQGICPDILTFNKLIHVL 226
Query: 208 SKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDS 267
K G + + ++F+K G N T+ I+ L R+ D A + E ++ G PD
Sbjct: 227 CKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDV 286
Query: 268 EKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ------EDETVKL 321
+I FCK K EA + P + +I+ C+ D+ ++
Sbjct: 287 ISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRD 346
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A M F + Y SS+I LC D++ A + + + +G ++N+++
Sbjct: 347 A--MFKGFIPDEFTY-----SSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVK 399
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
SK G + A++++K M G PD++TY +++G G + +A ILN+A
Sbjct: 400 GLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIP 459
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
T++TLI GYCK D A+++L+ M G+ P+V YN L+ LC KA
Sbjct: 460 DIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLC-KARKLDNVVDT 518
Query: 502 LEDMRLKGLHLNGITRALI 520
+ M KG N IT ++
Sbjct: 519 FKAMLEKGCTPNIITYNIL 537
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 127/289 (43%), Gaps = 1/289 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI F K K A +K + G N+ TY I + + A + +
Sbjct: 290 NTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMF 349
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G +PD +I+ C G A V+ A EK + L+ L ++ ++
Sbjct: 350 KGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQ 409
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
AL ++ D I ++ V+ LC+M + A +L+ I++G P FN++I
Sbjct: 410 -ALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLI 468
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
Y K +M A+E+L M S G+ PDV TY L++G +++ + +
Sbjct: 469 DGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCT 528
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ +TY+ LI +CK + A++L EMK G+ P++ LI LC
Sbjct: 529 PNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLC 577
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 148/336 (44%), Gaps = 16/336 (4%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
+ + GK + A VF + Y C + ++Y + L F A V +M + G PD
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPD 145
Query: 267 SEKVGKIISWFCKGGKAKEA-HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDM 325
+ FC G+ A ++ + + + S A +IS +E+ ++ A +
Sbjct: 146 VYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCA-VISGFYKENCQIE-AYHL 203
Query: 326 LDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSK 385
D+ + I F+ +I LC+ +V ++ L SK++ G P FN I +
Sbjct: 204 FDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCR 263
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
G + A +L+ + S GL PDV +Y L+ G+ ++ EA L++ + + T
Sbjct: 264 KGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFT 323
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC-------LKALDWRTA 498
Y+T+I G+CK A K+L + G P+ Y+ LI LC A+ +
Sbjct: 324 YNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAM 383
Query: 499 EK------LLEDMRLKGLHLNGITRALIRAVKELEE 528
EK +L + +KGL G+ ++ +K++ E
Sbjct: 384 EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMME 419
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 143/342 (41%), Gaps = 45/342 (13%)
Query: 235 YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR 294
Y ++ LS++ + A + + M+E G PD +++ CK G +A+ + A
Sbjct: 394 YNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAI 453
Query: 295 EKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDV 354
K P LI C++ K A+++LD + +++++ LC+ + +
Sbjct: 454 AKGCIPDIFTFNTLIDGYCKQRNMDK-AIEILDTMLSHGITPDVITYNTLLNGLCKARKL 512
Query: 355 HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
M+ +G P +N +I ++ K ++ AME+ K M++RGL PD+ T L
Sbjct: 513 DNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTL 572
Query: 415 MSGYANGGQMEEA---------------------------CEILNEA-------KKNHSR 440
+ G + G++++A CE LN + K S
Sbjct: 573 ICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSD 632
Query: 441 LSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
+P TY +I YCK D A L E G+ P+ K++ LC+
Sbjct: 633 CAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCV-------T 685
Query: 499 EKLLEDMRLKGLHL-NGITRALIRAVKELEEDAIENGEALVE 539
+L E + + L + NGI + ++ E ++ + + +VE
Sbjct: 686 HRLSEAVVIINLMVQNGIVPEEVNSIFEADKKEVAAPKIVVE 727
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 114/285 (40%), Gaps = 12/285 (4%)
Query: 155 WVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLT-VEILNELIALFSKLGKG 213
W + VV+ L K C S L D + KG + + N LI + K
Sbjct: 427 WTYNLVVNGLCKMGCLSDANG---ILNDAIA------KGCIPDIFTFNTLIDGYCKQRNM 477
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
A E+ + +G + TY + L + + D + M+E G P+ +
Sbjct: 478 DKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNIL 537
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEA 333
I FCK K EA ++ + + + P + LI LC E K A ++ E
Sbjct: 538 IESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDK-AYELFVTIEKEY 596
Query: 334 R-KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
+ Y+ F+ +I + C +V A+ L KM P N + +I +Y K G++ A
Sbjct: 597 KFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLA 656
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
L S+GL P T +++ ++ EA I+N +N
Sbjct: 657 HTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQN 701
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 9/180 (5%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+ ++R R V A + +M P +N++++ + G + A ++ M+
Sbjct: 79 YIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMK 138
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY----CKL 456
G+ PDVYT+T M + G+ A +LN + V+Y +I G+ C++
Sbjct: 139 DIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQI 198
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
E A L +EM G+ P++ +NKLI LC K + + +EKL + +G+ N T
Sbjct: 199 E----AYHLFDEMLKQGICPDILTFNKLIHVLCKKG-NVQESEKLFSKVMKRGVCPNLFT 253
>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 913
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 150/337 (44%), Gaps = 13/337 (3%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI L+ K+GK A + + G N +TY I F A+ + E+M+++G
Sbjct: 458 LINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSG 517
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD +I FCK G A + ++++M P +I + +K A
Sbjct: 518 LQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGD-MKRA 576
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
LD+LD + ++++I L R V A ++L+KM G P + ++
Sbjct: 577 LDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRG 636
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y+ GD+ A E ++ GLK DVY Y L+ G+M+ A + E +
Sbjct: 637 YAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARN 696
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
Y+ LI G+ + + A L+ +MK+ GV PN+ Y I + C KA D + A+ ++
Sbjct: 697 TFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINA-CCKAGDMQRAQTVI 755
Query: 503 EDMRLKGLHLN---------GITRALI--RAVKELEE 528
++M GL N G RA + RA+K EE
Sbjct: 756 DEMSDVGLKPNLKTYTTLIKGWARASLPDRALKCFEE 792
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 139/325 (42%), Gaps = 36/325 (11%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI+ F L AF +F + G ++ Y IEA + D A + EKM +
Sbjct: 493 LISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKER 552
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P + II F G K A + L R P LI L ++++ V+ A
Sbjct: 553 MQPSNRAFRPIIEGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQ-VERA 611
Query: 323 LDMLDDFSGEA------------RKYA-----------------------IKPFSSVIRS 347
+ +L+ S R YA + + +++R+
Sbjct: 612 VSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRA 671
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
C+ + A + +M S+ V+N +I +++ GD+ A +++K M+ G+ P+
Sbjct: 672 CCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPN 731
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
++TYT ++ G M+ A +++E + + TY TLI+G+ + D ALK
Sbjct: 732 IHTYTSYINACCKAGDMQRAQTVIDEMSDVGLKPNLKTYTTLIKGWARASLPDRALKCFE 791
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKA 492
EMK G++P+ Y+ L+ SL +A
Sbjct: 792 EMKLAGLKPDEAAYHCLVTSLLSRA 816
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 111/262 (42%), Gaps = 1/262 (0%)
Query: 189 EKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
+KE+ + +I F+ G K A ++ + GC TY I L R+
Sbjct: 549 QKERMQPSNRAFRPIIEGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQV 608
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
+ A SV KM G P+ I+ + G +A +T +E + + L
Sbjct: 609 ERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETL 668
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
+ + C+ ++ AL + + S + ++ +I R DV A L+ +M +G
Sbjct: 669 LRACCKSGR-MQSALAVTREMSSQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDG 727
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
PP + S I+A KAGDM A ++ M GLKP++ TYT L+ G+A + A
Sbjct: 728 VPPNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGLKPNLKTYTTLIKGWARASLPDRAL 787
Query: 429 EILNEAKKNHSRLSPVTYHTLI 450
+ E K + YH L+
Sbjct: 788 KCFEEMKLAGLKPDEAAYHCLV 809
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 77/152 (50%)
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
+ F +I + D H A+ M + G P VF S++ AY+ A DM A+ +
Sbjct: 278 REFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCTEE 337
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M++ G++ + TY+ L+SG+ + A + EAK N L+ + Y +I +C+
Sbjct: 338 MKAEGIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQSGN 397
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
D A +L++EM++ G+ +D Y+ ++ +
Sbjct: 398 MDRAEELVHEMEEDGIDAPIDAYHSMMHGYTI 429
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 1/184 (0%)
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+I + +I ++ V A + +M S G N ++ +IS + D T A +
Sbjct: 451 SIISYGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIF 510
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
+ M GL+PD Y L+ + G M+ A IL + +K + S + +I G+
Sbjct: 511 EEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVA 570
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ AL +L+ M+ G P V YN LI L K R A +L M + G+ N T
Sbjct: 571 GDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVER-AVSVLNKMSIAGITPNEHT 629
Query: 517 RALI 520
+I
Sbjct: 630 YTII 633
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 133/324 (41%), Gaps = 7/324 (2%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I ++K G A F G N + + A + + A S E+M G
Sbjct: 283 MIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCTEEMKAEG 342
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+IS F K + A ++ A+ + + +I + CQ + A
Sbjct: 343 IELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQSG-NMDRA 401
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+++ + + I + S++ ++D + ++ P + +I+
Sbjct: 402 EELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINL 461
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y K G + A+ + K M S G+K + TY+ L+SG+ + A I E K+ +
Sbjct: 462 YVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPD 521
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
Y+ LI +CK+ D A+++L +M+ +QP+ + +I+ + A D + A +L
Sbjct: 522 RAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAV-AGDMKRALDIL 580
Query: 503 EDMRLKG-----LHLNGITRALIR 521
+ MR G + N + LIR
Sbjct: 581 DLMRRSGCAPTVMTYNALIHGLIR 604
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 7/179 (3%)
Query: 332 EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
R A + F V+ S R +D + ++ P P F +I Y+K GD
Sbjct: 242 HGRDEACREFRRVVES--RPEDWQAVVSAFERI----PKPSRREFGLMIVYYAKRGDKHH 295
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
A + MR+RG++P+ + +T L+ YA M A E K L+ VTY LI
Sbjct: 296 ARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCTEEMKAEGIELTIVTYSILIS 355
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
G+ K+ + A L E K N Y+ +I + C ++ + AE+L+ +M G+
Sbjct: 356 GFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHC-QSGNMDRAEELVHEMEEDGI 413
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 147/311 (47%), Gaps = 21/311 (6%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
++E +AL SK+ K CV TY I L + + A+ + E+M+
Sbjct: 97 VDEAVALLSKMRKK--------------CVPTAVTYNSLISGLCKAERASEAYDLLEEMV 142
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+G +PD +I+ FCK K+ +A V+ + P + LI LC+E +
Sbjct: 143 YSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGR-L 201
Query: 320 KLALDMLDDF--SGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
K A+D+ SG + ++S+I CRM + A LL +M G P +
Sbjct: 202 KEAIDLFGRMIKSGSCMPNTVT-YNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYT 260
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
++++ + K + A ++L M +GL PDV T+T LM G ++ +A IL E ++
Sbjct: 261 TLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRK 320
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
+ TY+T++ GYC+ + + A K + E D PNV +N +I+ LC K
Sbjct: 321 SCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD--CPPNVVSFNIMIRGLC-KVNRSSE 377
Query: 498 AEKLLEDMRLK 508
A +L+E+ R +
Sbjct: 378 AMELVEEARRR 388
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 153/331 (46%), Gaps = 10/331 (3%)
Query: 190 KEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
++K V T N LI+ K + A+++ + GC+ + TY I + K D
Sbjct: 108 RKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSD 167
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY-TLAREKKMYPPQSVVAFL 308
A V E+++ G PD +I CK G+ KEA ++ + + P L
Sbjct: 168 DALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSL 227
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
IS C+ + + A+++L+ + + +++++ C++ + A LL++M +G
Sbjct: 228 ISGFCRMGK-MDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKG 286
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P F S++ + ++ A+ +L MR + P VYTY ++ GY Q+EEA
Sbjct: 287 LTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEAR 346
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ + E + V+++ +IRG CK+ A++L+ E + P+V Y +I L
Sbjct: 347 KFMLEEMDCPPNV--VSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGL 404
Query: 489 CL-KALD--WRTAEKLLEDMRLKGLHLNGIT 516
C K +D R K+LE+ G N IT
Sbjct: 405 CREKKVDEACRVYRKMLEE---PGCLPNSIT 432
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 135/294 (45%), Gaps = 12/294 (4%)
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH 287
C A+ TY I+ L + K + A KM+ G PD +I C + EA
Sbjct: 7 CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66
Query: 288 VVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFSSV 344
+ + P LI LC+ DE V L M A Y +S+
Sbjct: 67 KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTY-----NSL 121
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
I LC+ + A LL +M+ G P + ++I+ + K+ A+ + + + +RG
Sbjct: 122 ISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGF 181
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL-SPVTYHTLIRGYCKLEEFDCAL 463
+PDV TY+ L+ G G+++EA ++ K+ S + + VTY++LI G+C++ + D A+
Sbjct: 182 RPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAM 241
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLC-LKALDWRTAEKLLEDMRLKGLHLNGIT 516
LL M + G P+V Y L+ C L LD A LL M KGL + +T
Sbjct: 242 NLLERMAETGSSPDVVTYTTLMNGFCKLARLD--DAYDLLNQMTRKGLTPDVVT 293
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 137/307 (44%), Gaps = 4/307 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K+ + + A K G + TY I AL A E+M
Sbjct: 17 LIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRN 76
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P+ +I CKGG+ EA + + R KK P LIS LC+ E A
Sbjct: 77 LTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR-KKCVPTAVTYNSLISGLCKA-ERASEA 134
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
D+L++ I ++++I C+ K A + ++++ G P ++ +I
Sbjct: 135 YDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDG 194
Query: 383 YSKAGDMTPAMEML-KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
K G + A+++ ++++S P+ TY L+SG+ G+M+EA +L + S
Sbjct: 195 LCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSP 254
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
VTY TL+ G+CKL D A LLN+M G+ P+V + L+ LC + A +
Sbjct: 255 DVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLC-RENRLSDAVHI 313
Query: 502 LEDMRLK 508
L +MR K
Sbjct: 314 LGEMRRK 320
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 135/350 (38%), Gaps = 90/350 (25%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYG-CVANQETYYFTIEALSRRKIFDWAWSVCEKMIET 261
LI K G+ K A ++F + G C+ N TY I R D A ++ E+M ET
Sbjct: 191 LIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAET 250
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
GS PD +++ FCK + +A+ + K + P L+ LC+E+ +
Sbjct: 251 GSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENR-LSD 309
Query: 322 ALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV-F 376
A+ +L GE R+ + P +++++ CR + A+ M+ E P N V F
Sbjct: 310 AVHIL----GEMRRKSCSPTVYTYNTILDGYCRANQLEEARKF---MLEEMDCPPNVVSF 362
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY--------------------------- 409
N +I K + AME+++ R R PDV
Sbjct: 363 NIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLE 422
Query: 410 ---------TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
TY+ L++G N G ++ A RGY +E+
Sbjct: 423 EPGCLPNSITYSTLITGLCNAGMLDRA-----------------------RGY--IEK-- 455
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
G PN+ YN LI + KA A +LL+DM +G
Sbjct: 456 ------------GCVPNIGTYNLLIDAF-RKANRDEDARELLDDMVQRGF 492
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 170/379 (44%), Gaps = 9/379 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ A C +E + L D + G K V N +I K GK A V +
Sbjct: 397 NTLINAYCRQGLLEEAFELMDSMSGKGLKP----CVFTYNAIINGLCKTGKYLRAKGVLD 452
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ G + TY + R A + ++M G +PD +I K G
Sbjct: 453 EMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNG 512
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+A + + + P + LI C+ + + AL + D+ + + +
Sbjct: 513 CLDQALKYFRDMKNAGLAPDNVIYTILIGGFCR-NGVMSEALKVRDEMLEQGCXLDVVTY 571
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
++++ LC+ K + A L ++M G P F ++I+ Y K G+M A+ + ++M
Sbjct: 572 NTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQ 631
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
R LKPDV TY L+ G+ G +ME+ E+ N+ + ++Y LI GYC +
Sbjct: 632 RNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSE 691
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALI 520
A +L +EM + G + + N +++ C +A + A++ L +M LKG+ +GIT LI
Sbjct: 692 AFRLWDEMVEKGFEATIITCNTIVKGYC-RAGNAVKADEFLSNMLLKGIVPDGITYNTLI 750
Query: 521 RAVKELEEDAIENGEALVE 539
++E+ ++ ALV
Sbjct: 751 NGF--IKEENMDRAFALVN 767
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 139/298 (46%), Gaps = 2/298 (0%)
Query: 190 KEKGV-LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
K KG+ +++ N L+ K+G A+E++ + G N T I AL + +
Sbjct: 315 KSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKI 374
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
+ S M E G PD +I+ +C+ G +EA + K + P +
Sbjct: 375 ENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAI 434
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
I+ LC+ + ++ A +LD+ ++ ++ CR ++ A+ + +M S+G
Sbjct: 435 INGLCKTGKYLR-AKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQG 493
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P F+++I SK G + A++ + M++ GL PD YT L+ G+ G M EA
Sbjct: 494 VVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEAL 553
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
++ +E + L VTY+T++ G CK + A +L EM + GV P+ + LI
Sbjct: 554 KVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLIN 611
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 126/286 (44%), Gaps = 5/286 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F + G A +V ++ + GC + TY + L + K+ A + +M E G
Sbjct: 539 LIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 598
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD +I+ + K G +A ++ + ++ + P LI C+ E K+
Sbjct: 599 VFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVN 658
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++ +D + +I C M V A L +M+ +G N+++
Sbjct: 659 -ELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKG 717
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y +AG+ A E L M +G+ PD TY L++G+ M+ A ++N K +S L
Sbjct: 718 YCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVN--KMENSGLL 775
Query: 443 P--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
P +TY+ ++ G+ + A ++ +M + GV P+ Y LI
Sbjct: 776 PDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLIN 821
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 9/196 (4%)
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
V LA ++ + + + + +I +LC+ + + K+ LS M +G P +N+
Sbjct: 339 VDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNT 398
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I+AY + G + A E++ M +GLKP V+TY +++G G+ A +L+E K
Sbjct: 399 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIG 458
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL----CLKALD 494
TY+ L+ C+ + A ++ +EM GV P++ ++ LI L CL
Sbjct: 459 MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQ-- 516
Query: 495 WRTAEKLLEDMRLKGL 510
A K DM+ GL
Sbjct: 517 ---ALKYFRDMKNAGL 529
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 102/253 (40%), Gaps = 36/253 (14%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A E+F + + G + T+ I + + A ++ E MI+ PD +I
Sbjct: 587 ADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLID 646
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
FCKG + ++ + ++ +++YP LI+ C V A + D+ + +
Sbjct: 647 GFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMG-CVSEAFRLWDEMVEKGFE 705
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAY------------ 383
I +++++ CR + A LS M+ +G P +N++I+ +
Sbjct: 706 ATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFAL 765
Query: 384 -----------------------SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
S+ G M A ++ M RG+ PD TYT L++G+
Sbjct: 766 VNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVT 825
Query: 421 GGQMEEACEILNE 433
++EA + +E
Sbjct: 826 QNNLKEAFRVHDE 838
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 85/174 (48%), Gaps = 1/174 (0%)
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+I +S++ L ++ V A + +++ G N +I+A K + L
Sbjct: 322 SINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFL 381
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
M +G+ PDV TY L++ Y G +EEA E+++ + TY+ +I G CK
Sbjct: 382 SDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKT 441
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
++ A +L+EM +G+ P+ YN L+ C + + AE++ ++M +G+
Sbjct: 442 GKYLRAKGVLDEMLKIGMSPDTATYNILLVE-CCRNDNMMDAERIFDEMPSQGV 494
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 109/239 (45%), Gaps = 25/239 (10%)
Query: 317 ETVKLALDMLDDFSGEAR--KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP--- 371
E ++L +D + K++++ FS++I L R + + A+ ++ +M+ +
Sbjct: 213 ENLQLGQRFIDSITSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVE 272
Query: 372 ---------GNA-----VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
GN VF+ ++ Y +A + E ++++S+GL + L+ G
Sbjct: 273 IVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGG 332
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
G ++ A EI E ++ +++ T + +I CK ++ + L++M++ GV P+
Sbjct: 333 LVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPD 392
Query: 478 VDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH-----LNGITRALIRAVKELEEDAI 531
V YN LI + C + L A +L++ M KGL N I L + K L +
Sbjct: 393 VVTYNTLINAYCRQGL-LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGV 450
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 124/348 (35%), Gaps = 54/348 (15%)
Query: 190 KEKGVLTVEILNELIALFSKLGKGKAAF-----------------EVFNKFGDYGCVANQ 232
++ GV VEI+ L+ + G F E F G +
Sbjct: 264 RKSGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSI 323
Query: 233 ETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTL 292
+ L + D AW + ++++ +G + + +I+ CK K + +
Sbjct: 324 NACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSD 383
Query: 293 AREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMK 352
EK ++P + ++++I + CR
Sbjct: 384 MEEKGVFPD------------------------------------VVTYNTLINAYCRQG 407
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT 412
+ A L+ M +G P +N++I+ K G A +L M G+ PD TY
Sbjct: 408 LLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYN 467
Query: 413 GLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
L+ M +A I +E V++ LI K D ALK +MK+
Sbjct: 468 ILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNA 527
Query: 473 GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
G+ P+ Y LI C + A K+ ++M +G L+ +T I
Sbjct: 528 GLAPDNVIYTILIGGFCRNGV-MSEALKVRDEMLEQGCXLDVVTYNTI 574
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 80/207 (38%), Gaps = 1/207 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI F K + + E++N N +Y I A+ + ++M+E
Sbjct: 642 NTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVE 701
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G I+ +C+ G A +A + K + P LI+ +E E +
Sbjct: 702 KGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKE-ENMD 760
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A +++ + ++ ++ R + A+ ++ KMI G P + + S+I
Sbjct: 761 RAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLI 820
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPD 407
+ + ++ A + M RG PD
Sbjct: 821 NGHVTQNNLKEAFRVHDEMLQRGFVPD 847
>gi|413934354|gb|AFW68905.1| hypothetical protein ZEAMMB73_510949 [Zea mays]
Length = 845
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 151/345 (43%), Gaps = 41/345 (11%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGV-LTVEILNELIALFSKLGKGKAAFEVF 220
D L +C + W+++ +G E+GV L V N LIA +SK G + A E++
Sbjct: 391 DGLDMLVCRLCWDHRLDDAWELL--LGAIEQGVPLRVTGFNALIAAYSKEGLHEEASELY 448
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
G + T+ + I L + D A + E M+ G + + ++F G
Sbjct: 449 RIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTICLDAYFRDG 508
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
AL DD +
Sbjct: 509 NAVG-------------------------------------ALKCWDDMGNIGLQTDFIA 531
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
FS+ I LCR+ V+ A ++M S G P N +NS+ISA KAG+MT A+++++ MR
Sbjct: 532 FSAYINGLCRLDCVNEAYQAFAEMTSRGIVPNNITYNSIISALCKAGNMTEALKLVQNMR 591
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
GL PD+YT L+ G G+++ +L + N VTY+T+I YC+ ++ +
Sbjct: 592 QSGLVPDIYTSNILIDGLCREGKLKMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAQDMN 651
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
A+ +N+M G +P++ YN + SLC + A KLL+++
Sbjct: 652 SAMNFMNKMLVAGCEPDIFTYNIWMHSLCRNHM-LNQAGKLLDEL 695
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 133/331 (40%), Gaps = 49/331 (14%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G A + ++ G+ G + + I L R + A+ +M G +P++
Sbjct: 508 GNAVGALKCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQAFAEMTSRGIVPNNITY 567
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
IIS CK G EA + R+ + P LI LC+E + +K+ ++L D
Sbjct: 568 NSIISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILIDGLCREGK-LKMVDNLLLDMC 626
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
++++I + CR +D++ A ++KM+
Sbjct: 627 SNGLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVA----------------------- 663
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
G +PD++TY M + +A ++L+E + VTY+TL+
Sbjct: 664 ------------GCEPDIFTYNIWMHSLCRNHMLNQAGKLLDELVAVDCSPNSVTYNTLM 711
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL-----KALDWRTAEKLLEDM 505
G C + D A+ L + + +PN N + C +AL W AEKL ED
Sbjct: 712 DGICS-DVLDRAMILTGRLIKMAFKPNTITLNVFLSHFCKQGFGNRALMW--AEKLRED- 767
Query: 506 RLKGLHLNGITRALIR-AVKELEEDAIENGE 535
+G TR +I A +E+E+D N E
Sbjct: 768 ---SFVFDGATRNIIDWARREMEDDPKANNE 795
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 134/344 (38%), Gaps = 39/344 (11%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI G + AF++F GC TY ++ L A + ++M +
Sbjct: 257 NILIKGHCVFGWSRDAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQ 316
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G ++ +I + K G+ +A Y + + + P + + + +
Sbjct: 317 VGIQVNTITFNVLIDGYAKSGQMDQASAAYREMQARGLVPDSCTFNIIAARAHKFGYAAQ 376
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
L D D FS + ++ LC + A LL I +G P FN++I
Sbjct: 377 LVHDH-DMFSSH---MSADGLDMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALI 432
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+AYSK G A E+ ++M GL P T+ L+ G N G+++EA +L
Sbjct: 433 AAYSKEGLHEEASELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYC 492
Query: 441 LSP----------------------------------VTYHTLIRGYCKLEEFDCALKLL 466
LS + + I G C+L+ + A +
Sbjct: 493 LSTSFTICLDAYFRDGNAVGALKCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQAF 552
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
EM G+ PN YN +I +LC KA + A KL+++MR GL
Sbjct: 553 AEMTSRGIVPNNITYNSIISALC-KAGNMTEALKLVQNMRQSGL 595
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 1/173 (0%)
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
R +V A + +M +EGP P A FN+++ + G + A +L +M G+ PDV
Sbjct: 195 RSGEVRAAWNVFEEMTAEGPRPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVC 254
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
+Y L+ G+ G +A ++ ++ + VTY+ L+ C A +L +EM
Sbjct: 255 SYNILIKGHCVFGWSRDAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEM 314
Query: 470 KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRA 522
VG+Q N +N LI K+ A +M+ +GL + T +I A
Sbjct: 315 AQVGIQVNTITFNVLIDGYA-KSGQMDQASAAYREMQARGLVPDSCTFNIIAA 366
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 115/292 (39%), Gaps = 36/292 (12%)
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
AW+V E+M G P ++ FC G + A + + + + P LI
Sbjct: 202 AWNVFEEMTAEGPRPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCSYNILIK 261
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
C + + A M + + + ++ ++ LC + A+ L +M G
Sbjct: 262 GHCVFGWS-RDAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQ 320
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS-----GYAN----- 420
FN +I Y+K+G M A + M++RGL PD T+ + + GYA
Sbjct: 321 VNTITFNVLIDGYAKSGQMDQASAAYREMQARGLVPDSCTFNIIAARAHKFGYAAQLVHD 380
Query: 421 ----------------------GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
++++A E+L A + L ++ LI Y K
Sbjct: 381 HDMFSSHMSADGLDMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIAAYSKEGL 440
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA-LDWRTAEKLLEDMRLKG 509
+ A +L M +G+ P+ +N LI LC + LD A+ LLE M KG
Sbjct: 441 HEEASELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLD--EAQLLLEHMVSKG 490
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 3/131 (2%)
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+ A+ AG A+++L +R G P + + L+ G++ A + E
Sbjct: 155 LHAFLAAGMAAEALDVLARVRRSGNTPSLSALSALLRLLFRSGEVRAAWNVFEEMTAEGP 214
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW-RTA 498
R S T++ ++ G+C A LL M G+ P+V YN LI+ C+ W R A
Sbjct: 215 RPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCSYNILIKGHCV--FGWSRDA 272
Query: 499 EKLLEDMRLKG 509
K+ E M G
Sbjct: 273 FKMFEGMHRSG 283
>gi|224142151|ref|XP_002324422.1| predicted protein [Populus trichocarpa]
gi|222865856|gb|EEF02987.1| predicted protein [Populus trichocarpa]
Length = 453
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 172/379 (45%), Gaps = 18/379 (4%)
Query: 158 SGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAF 217
S + ++++ A S KE L+ +KE G K T N LI + GK + A
Sbjct: 83 SILFNSIINAFSESGNMKEAMKLFRKMKESGCKP----TTSTFNTLIKGYGNAGKTEEAL 138
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
++ D G NQ TY + A ++ + AW++ KM+ +G PD+ + +
Sbjct: 139 KLLEFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLARAY 198
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
+ G+ A + +++ P + + +++ C+E V + F ++
Sbjct: 199 AEKGETIRAEEMILEMLNRRVTPNERTCSIIVNGYCKEGNMVDAS-----RFVFRMKELG 253
Query: 338 IKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
+ P F+S+I+ D G +L+ M G P F+++++A+S AG M
Sbjct: 254 VLPNLFVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSAGRMDKCK 313
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
E+ M ++PD++ ++ L GY G+ E+A IL +K + V T+I G+
Sbjct: 314 EIFNDMVKAEIEPDIHAFSILAKGYVRAGEPEKAESILTSMRKYGVHPNVVICTTVISGW 373
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
C + + A+K+ +M ++GV PN+ Y LI +A AE+LL+ M KG+
Sbjct: 374 CSAGKMEHAMKVYEKMCEIGVSPNLKTYETLIWGYG-EAKQPLKAEELLQVMEEKGVFPK 432
Query: 514 GITRALI----RAVKELEE 528
T LI RA+ L E
Sbjct: 433 KGTMQLIADAWRAIGLLSE 451
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 150/341 (43%), Gaps = 39/341 (11%)
Query: 210 LGKGKA--AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDS 267
+GKGK A +FN D G TY + AL+R+K+F + K+ E G PDS
Sbjct: 24 IGKGKPREAHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSILRLISKVEENGMKPDS 83
Query: 268 EKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLD 327
II+ F + G KEA ++ +E P S LI +T + AL +L+
Sbjct: 84 ILFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEE-ALKLLE 142
Query: 328 DFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG 387
K + ++ ++R+ C +++ A ++ KM++ G P +N++ AY++ G
Sbjct: 143 FLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLARAYAEKG 202
Query: 388 DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC------------------- 428
+ A EM+ M +R + P+ T + +++GY G M +A
Sbjct: 203 ETIRAEEMILEMLNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFRMKELGVLPNLFVFN 262
Query: 429 ----------------EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
E+L ++N R VT+ T++ + D ++ N+M
Sbjct: 263 SLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSAGRMDKCKEIFNDMVKA 322
Query: 473 GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
++P++ ++ L + ++A + AE +L MR G+H N
Sbjct: 323 EIEPDIHAFSILAKGY-VRAGEPEKAESILTSMRKYGVHPN 362
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 126/288 (43%), Gaps = 45/288 (15%)
Query: 272 KIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSG 331
K+++ GK +EAH ++ ++ P L+++L ++ KL +L S
Sbjct: 18 KLMNVLIGKGKPREAHSIFNSLMDEGHKPTLITYTTLVAALTRQ----KLFKSILRLIS- 72
Query: 332 EARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG 387
+ + +KP F+S+I + ++ A L KM G P + FN++I Y AG
Sbjct: 73 KVEENGMKPDSILFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAG 132
Query: 388 DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYH 447
A+++L+ ++ G+KP+ TY L+ + N MEEA ++ + + + VTY+
Sbjct: 133 KTEEALKLLEFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYN 192
Query: 448 TLIR-----------------------------------GYCKLEEFDCALKLLNEMKDV 472
TL R GYCK A + + MK++
Sbjct: 193 TLARAYAEKGETIRAEEMILEMLNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFRMKEL 252
Query: 473 GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
GV PN+ +N LI+ L +D +++L M G+ + +T + I
Sbjct: 253 GVLPNLFVFNSLIKGF-LDTMDTEGVDEVLTLMEENGVRPDVVTFSTI 299
>gi|356513139|ref|XP_003525271.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 621
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 162/358 (45%), Gaps = 15/358 (4%)
Query: 158 SGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAF 217
S +++A++ A S E ++ +KE G K T N LI F +G+ +
Sbjct: 130 SILLNAMINAFSDSGKVDEAMKIFQKMKEYGCKP----TTSTYNTLIKGFGIVGRPYESM 185
Query: 218 EVFNKFG-DYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
++ G D N TY I+A +K + AW+V KM+ +G PD +
Sbjct: 186 KLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARA 245
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
+ + G+ ++A + + K+ P + +IS C+E + AL L ++
Sbjct: 246 YAQNGETEKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTE-ALRFLYRM----KEL 300
Query: 337 AIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
+ P F+S+I+ D +G L+ M G P F+++++A+S AG M
Sbjct: 301 GVHPNPVVFNSLIKGYLDATDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNC 360
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
E+ M G++PD++ Y+ L GY GQ +A +L K + + V + T+I G
Sbjct: 361 EEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAESLLTSMSKYGVQTNVVIFTTIISG 420
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+C + D A L +M ++G PN+ Y LI W+ AE++L M +G+
Sbjct: 421 WCAAGKMDRAFSLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWK-AEEILSTMEERGV 477
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 148/306 (48%), Gaps = 9/306 (2%)
Query: 210 LGKGKA--AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDS 267
+GKGK A VF+ + G TY + AL+R+K F ++ K+ + G PDS
Sbjct: 71 IGKGKPHEAQAVFHNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDS 130
Query: 268 EKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISS---LCQEDETVKLALD 324
+ +I+ F GK EA ++ +E P S LI + + E++KL L+
Sbjct: 131 ILLNAMINAFSDSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYESMKL-LE 189
Query: 325 MLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
M+ E K + ++ +I++ C K + A +L KM++ G P +N++ AY+
Sbjct: 190 MMGQ--DENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYA 247
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV 444
+ G+ A ++ M+ +KP+ T ++SGY G M EA L K+ +PV
Sbjct: 248 QNGETEKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPV 307
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLED 504
+++LI+GY + + + L M++ G++P+V ++ ++ + L E++ D
Sbjct: 308 VFNSLIKGYLDATDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGL-MDNCEEIFND 366
Query: 505 MRLKGL 510
M G+
Sbjct: 367 MVKAGI 372
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 105/200 (52%), Gaps = 2/200 (1%)
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A + + + E K + +++++ +L R K LLSK+ G P + + N++I+
Sbjct: 79 AQAVFHNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMIN 138
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS-R 440
A+S +G + AM++ + M+ G KP TY L+ G+ G+ E+ ++L ++ + +
Sbjct: 139 AFSDSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYESMKLLEMMGQDENVK 198
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+ TY+ LI+ +C ++ + A +L++M G+QP+V YN + ++ + AE+
Sbjct: 199 PNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNG-ETEKAER 257
Query: 501 LLEDMRLKGLHLNGITRALI 520
L+ M+ + N T +I
Sbjct: 258 LILKMQYNKVKPNERTCGII 277
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 69/163 (42%), Gaps = 26/163 (15%)
Query: 348 LCR----MKDVHGAKTLLSKMISEGPP-PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+CR + VH L++ +I +G P AVF++ +
Sbjct: 50 ICRGNNSCQTVHARTKLMNALIGKGKPHEAQAVFHN--------------------LTEE 89
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G KP + TYT L++ + + +L++ N + + + +I + + D A
Sbjct: 90 GHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINAFSDSGKVDEA 149
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
+K+ +MK+ G +P YN LI+ + + + KLLE M
Sbjct: 150 MKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYESM-KLLEMM 191
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 4/102 (3%)
Query: 335 KYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
KY ++ F+++I C + A +L KM G P + ++I Y +A
Sbjct: 404 KYGVQTNVVIFTTIISGWCAAGKMDRAFSLCEKMHEMGTSPNLKTYETLIWGYGEAKQPW 463
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
A E+L M RG+ P++ T + + G +EA ILN
Sbjct: 464 KAEEILSTMEERGVVPEMSTMQLVADAWRAIGLFKEANRILN 505
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 148/316 (46%), Gaps = 2/316 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
LN ++ + KLG A +K G + TY I R K D A ++ M
Sbjct: 207 LNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMP 266
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
G L + +I FC+ + EA +++ E +P +I +LCQ
Sbjct: 267 NKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKT 326
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
+ AL+M + + + + + ++ +I SLC + AK +L+ M+ +G P +N++
Sbjct: 327 E-ALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNAL 385
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I Y K G A+E+L LM S P+ TY L+ G+ G + +A +L++ +
Sbjct: 386 IDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKL 445
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
+ + VTY+ LI G CK + A KLL+ M + G+ P+ Y+ I +LC + L A
Sbjct: 446 QPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGL-VEEAR 504
Query: 500 KLLEDMRLKGLHLNGI 515
L E ++ KG+ N +
Sbjct: 505 SLFESLKEKGIKANEV 520
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 131/313 (41%), Gaps = 38/313 (12%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
TV +I +LG+ A +F + + C N TY I +L FD A +
Sbjct: 308 TVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKIL 367
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
M+E G +P +I +CK G + A + +L P
Sbjct: 368 NGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSP--------------- 412
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
AR Y + +I CR K++H A +LL KM+ P
Sbjct: 413 ----------------NARTY-----NELILGFCRGKNIHKAMSLLHKMLERKLQPNVVT 451
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N +I K GD+ A ++L LM GL PD +TY+ + G +EEA + K
Sbjct: 452 YNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLK 511
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+ + + V Y TLI GYCK+ + LL++M G PN YN LI C K ++
Sbjct: 512 EKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYC-KEKNF 570
Query: 496 RTAEKLLEDMRLK 508
+ A +LL D+ +K
Sbjct: 571 KEA-RLLVDIMIK 582
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 146/348 (41%), Gaps = 43/348 (12%)
Query: 181 WDIVKEI--GEKEKGVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYF 237
+D K+I G EKG++ +V N LI + K G +A E+ + C N TY
Sbjct: 360 FDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNE 419
Query: 238 TIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKK 297
I R K A S+ KM+E P+ +I CK G A+ + +L E
Sbjct: 420 LILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESG 479
Query: 298 MYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGA 357
+ P + + I +LC+ V+ A + + + K +S++I C++ V
Sbjct: 480 LVPDEWTYSVFIDTLCKRG-LVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDG 538
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAG---------------DMTP----------- 391
+ LL KM+S G P + +NS+I Y K D+ P
Sbjct: 539 RFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDN 598
Query: 392 ---------AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
A +M M S G PDV+ YT + Y + G++++A E+L K N +
Sbjct: 599 LLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDA-EVL-ICKMNAKGIM 656
Query: 443 PVT--YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
P T Y I Y + D A +L M +VG +P+ Y+ LI+ L
Sbjct: 657 PDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHL 704
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 127/316 (40%), Gaps = 30/316 (9%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
I K G + A +F + G AN+ Y I+ + + +KM+ G
Sbjct: 490 FIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAG 549
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+P+S +I +CK KEA ++ + ++ + P LI +L ++DE + A
Sbjct: 550 CVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQ-A 608
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
DM D + +++ I + C + A+ L+ KM ++G P ++ I A
Sbjct: 609 HDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDA 668
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG-------------------- 422
Y + G + A +LK M G +P YTY+ L+ +N
Sbjct: 669 YGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASN 728
Query: 423 ---------QMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
E ++ + ++ + TY I G CK+ + A +L + MK+ G
Sbjct: 729 DFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKG 788
Query: 474 VQPNVDEYNKLIQSLC 489
PN D YN L+ C
Sbjct: 789 QSPNEDIYNSLLGCSC 804
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 103/208 (49%), Gaps = 5/208 (2%)
Query: 303 SVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLS 362
+++ L+S DE + L+MLDD I ++++ C++ +V A+ +S
Sbjct: 173 NMLLMLLSRFLMIDEMKSVYLEMLDDMVTPN----IFTLNTMVNGYCKLGNVVEAELYVS 228
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG 422
K++ G + S+I Y + ++ A + M ++G + +YT L+ G+
Sbjct: 229 KIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEAR 288
Query: 423 QMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
+++EA ++ ++ +++ + TY +I C+L AL + EM + QPNV Y
Sbjct: 289 RVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYT 348
Query: 483 KLIQSLCLKALDWRTAEKLLEDMRLKGL 510
LI SLC + ++ A+K+L M KGL
Sbjct: 349 VLICSLCEDS-NFDDAKKILNGMLEKGL 375
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 73/155 (47%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
K ++ ++ ++ L R + K++ +M+ + P N++++ Y K G++ A
Sbjct: 166 KLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAEL 225
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+ + GL D +TYT L+ GY ++ A I + V+Y LI G+C
Sbjct: 226 YVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFC 285
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ D ALKL ++M + P V Y +I +LC
Sbjct: 286 EARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALC 320
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 99/292 (33%), Gaps = 7/292 (2%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V I I + G+ K A + K G + + Y I+A R D A+ + +
Sbjct: 624 VFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILK 683
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M E G P +I K KE L+ S C
Sbjct: 684 RMHEVGCEPSYYTYSCLIKHL-SNAKPKEVSSSSELSDLSSGVASNDF------SNCWRR 736
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ LD+ + + I LC++ + A L M +G P ++
Sbjct: 737 VDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIY 796
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
NS++ + G A+ L +M P + + L+ G + G E+A + +
Sbjct: 797 NSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQ 856
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ + LI G K D L M+ G Q + Y+ LI+
Sbjct: 857 CEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGF 908
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 164/368 (44%), Gaps = 8/368 (2%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+ +C +E V E E V + LI K G+ + A EVF +
Sbjct: 341 ALMDGLCKGDRLQEAQQ----VLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKR 396
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G N TY I D A + E+M TG LPD +I CK G+
Sbjct: 397 MIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGR 456
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
A EA+ ++ + K P + LI C+ E + +A + DD +A + FS
Sbjct: 457 APEANRLFGDMKAKFCNPDVITYSCLIGGFCKL-ERIDMARTLFDDMLKQAVLPDVVTFS 515
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+++ C V A+ LL +M++ P + S++ + K G M A +LK M R
Sbjct: 516 TLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKR 575
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G +P+V TYT L+ + G+ A +L E N + + +TY +LI G+C + + A
Sbjct: 576 GCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEA 635
Query: 463 LKLLNEM-KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL-HLNGITRALI 520
K+L + +D + ++ Y ++ LC + A +LLE ++ G + I ALI
Sbjct: 636 RKILERLERDENCKADMFAYRVMMDGLC-RTGRMSAALELLEAIKQSGTPPRHDIYVALI 694
Query: 521 RAVKELEE 528
R + + +E
Sbjct: 695 RGLCQGKE 702
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 144/319 (45%), Gaps = 15/319 (4%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRR----KIFDWAWSV-CEK 257
+I K G A E+ + + G V + Y F I AL + K D+ S+ CEK
Sbjct: 65 VIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEK 124
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
+ T ++ +I CK + EA + ++K P + LI+ C+ +
Sbjct: 125 NVITWTI--------MIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHK 176
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
V A +L + + +S+VI CR V A L +M+ G P +N
Sbjct: 177 -VHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYN 235
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+++S + G M A E+L MR RGL+PD ++Y LM+G G+++ A ++ +
Sbjct: 236 TLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNG 295
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
V Y TLI G CK D A KL +M++ +P+V + L+ LC K +
Sbjct: 296 DCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLC-KGDRLQE 354
Query: 498 AEKLLEDMRLKGLHLNGIT 516
A+++LE M + N IT
Sbjct: 355 AQQVLETMEDRNCTPNVIT 373
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 132/274 (48%), Gaps = 5/274 (1%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
N TY EAL R + D + + G P+ +I CK G +A +
Sbjct: 23 NVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELL 82
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
RE P ++ F+I +LC+ T K ALD S E K I ++ +I LC+
Sbjct: 83 EEMRESGPVPDAAIYNFVIHALCKARNTAK-ALDYFR--SMECEKNVIT-WTIMIDGLCK 138
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ A T +KM +G P +N +I+ + K + A +LK M+ GL P+V T
Sbjct: 139 ANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVT 198
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
Y+ ++ G+ +++ A ++ + +N + VTY+TL+ G C+ D A +LL+EM+
Sbjct: 199 YSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMR 258
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLED 504
+ G+QP+ Y+ L+ LC K A K+ ED
Sbjct: 259 ERGLQPDKFSYDTLMAGLC-KTGKIDMALKVFED 291
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 96/203 (47%), Gaps = 33/203 (16%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK--- 397
++ VI+ LC+ D+ A LL +M GP P A++N VI A KA + A++ +
Sbjct: 62 YAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSME 121
Query: 398 -----------------------------LMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
M+ +G P+ +TY L++G+ ++ A
Sbjct: 122 CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 181
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+L E K++ + VTY T+I G+C+ + D A KL +M + G PN+ YN L+ L
Sbjct: 182 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 241
Query: 489 CLKALDWRTAEKLLEDMRLKGLH 511
C L A +LL++MR +GL
Sbjct: 242 CRNGL-MDEAYELLDEMRERGLQ 263
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 5/124 (4%)
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
+ +G +VYTY L +++E C IL + TY +I+G CK +
Sbjct: 16 KQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDL 75
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLC-----LKALDWRTAEKLLEDMRLKGLHLNG 514
D A +LL EM++ G P+ YN +I +LC KALD+ + + +++ + ++G
Sbjct: 76 DKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVITWTIMIDG 135
Query: 515 ITRA 518
+ +A
Sbjct: 136 LCKA 139
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 72/178 (40%), Gaps = 33/178 (18%)
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
+N + A +A + +LK G+ P+V+TY ++ G G +++ACE+L E
Sbjct: 26 TYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELLEEM 85
Query: 435 K---------------------KNHSRL-----------SPVTYHTLIRGYCKLEEFDCA 462
+ +N ++ + +T+ +I G CK A
Sbjct: 86 RESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVITWTIMIDGLCKANRLPEA 145
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
+MK G PN YN LI C K A LL++M+ GL N +T + +
Sbjct: 146 TTYFAKMKKKGTVPNEWTYNVLINGFC-KVHKVHRAYLLLKEMKESGLAPNVVTYSTV 202
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 140/313 (44%), Gaps = 2/313 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+ L+ LI FS L + AF V K G T+ I L + F A + +
Sbjct: 133 IYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFD 192
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
M+ G PD II+ CK G+ A + E P + +I S ++D
Sbjct: 193 DMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSH-RKD 251
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
V ALD+ + I ++S+I+ LC A LL++M S P F
Sbjct: 252 RRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTF 311
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N ++ K G ++ A +LK M G++PDV TY+ LM GY+ ++ EA ++ +
Sbjct: 312 NVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMIT 371
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ +Y+ LI GYCK++ D A +L NEM G+ PN YN LI LC + R
Sbjct: 372 KGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLC-QLGSLR 430
Query: 497 TAEKLLEDMRLKG 509
A L ++M G
Sbjct: 431 EARNLFKNMHTNG 443
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 165/390 (42%), Gaps = 63/390 (16%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
T+ LI K+GK A E+F+ GC + TY I L + A +
Sbjct: 167 TIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLL 226
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+KM E G P+ II K + EA +++ + K + P LI LC
Sbjct: 227 KKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNF 286
Query: 316 DETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
+ K A +L+ E R I P F+ ++ ++C+ V A+ +L M G P
Sbjct: 287 SQW-KEASALLN----EMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEP 341
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
++S++ YS ++ A ++ M ++G KPDV++Y L++GY +++EA ++
Sbjct: 342 DVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLF 401
Query: 432 NEAKKNHSRLSP--VTYHTLIRGYCKLEE------------------------------- 458
NE H L+P V+Y+TLI G C+L
Sbjct: 402 NEMI--HQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFC 459
Query: 459 ----FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN- 513
F A +L M+ +PN+ YN LI ++C K+ + R A KL ++ +KGL N
Sbjct: 460 KQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMC-KSGNLRDARKLFSELFVKGLQPNA 518
Query: 514 -------------GITRALIRAVKELEEDA 530
G+ + A + +EED
Sbjct: 519 QIYTTIINGLCKEGLLDEALEAFRNMEEDG 548
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 132/293 (45%), Gaps = 2/293 (0%)
Query: 240 EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
+A S R I D A + M+ LP + K++S K G+ + + T E
Sbjct: 71 DACSFRNI-DDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGL 129
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P ++ + + V LA +L + I F+++I LC++ A
Sbjct: 130 SPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAME 189
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
L M++ G P + ++I+ K G+ A +LK M G +P+V TY+ ++ +
Sbjct: 190 LFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHR 249
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
++ EA +I + K TY++LI+G C ++ A LLNEM+ + + P++
Sbjct: 250 KDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIV 309
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIE 532
+N L+ ++C K A+ +L+ M G+ + +T + + L + +E
Sbjct: 310 TFNVLVDTIC-KEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVE 361
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 91/210 (43%), Gaps = 1/210 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI + K+ + A ++FN+ G N +Y I L + A ++ + M
Sbjct: 382 NILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHT 441
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G+LP+ ++ FCK G +A ++ + P + LI ++C+ ++
Sbjct: 442 NGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGN-LR 500
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A + + + + + ++++I LC+ + A M +G PP +N +I
Sbjct: 501 DARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVII 560
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ D + A++++ MR +G DV T
Sbjct: 561 RGFLHHKDESRAVQLIGEMRDKGFIADVGT 590
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 143/306 (46%), Gaps = 8/306 (2%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
F G+ AA + N GC N +Y I + A+ + ++M++ G PD
Sbjct: 156 FCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPD 215
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLAL 323
K+I CK G +E+ +++ ++ + P I LC++ DE +L
Sbjct: 216 ILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARL-- 273
Query: 324 DMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAY 383
L+ E + ++++I C+ + A+ L KM++ G P +N++I+ +
Sbjct: 274 --LESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGF 331
Query: 384 SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
KAG M A ++L+ +G PD +TY+ L++G N G M A + EA + + S
Sbjct: 332 CKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSI 391
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
+ Y+TL++G K AL+L+ +M + G P++ YN ++ LC K A +L
Sbjct: 392 ILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLC-KMGCLSDANGILN 450
Query: 504 DMRLKG 509
D KG
Sbjct: 451 DAIAKG 456
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 169/379 (44%), Gaps = 27/379 (7%)
Query: 151 CFFKWVT-SGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEIL--NELIALF 207
C F V+ V+ K C + E Y L+D E K + +IL N+LI +
Sbjct: 177 CEFNAVSYCAVISGFYKENC----QIEAYHLFD------EMLKQGICPDILTFNKLIHVL 226
Query: 208 SKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDS 267
K G + + ++F+K G N T+ I+ L R+ D A + E ++ G PD
Sbjct: 227 CKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDV 286
Query: 268 EKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ------EDETVKL 321
+I FCK K EA + P + +I+ C+ D+ ++
Sbjct: 287 ISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRD 346
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A M F + Y SS+I LC D++ A + + + +G ++N+++
Sbjct: 347 A--MFKGFIPDEFTY-----SSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVK 399
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
SK G + A++++K M G PD++TY +++G G + +A ILN+A
Sbjct: 400 GLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIP 459
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
T++TLI GYCK D A+++L+ M G+ P+V YN L+ LC KA
Sbjct: 460 DIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLC-KARKLDNVVDT 518
Query: 502 LEDMRLKGLHLNGITRALI 520
+ M KG N IT ++
Sbjct: 519 FKAMLEKGCTPNIITYNIL 537
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 127/289 (43%), Gaps = 1/289 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI F K K A +K + G N+ TY I + + A + +
Sbjct: 290 NTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMF 349
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G +PD +I+ C G A V+ A EK + L+ L ++ ++
Sbjct: 350 KGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQ 409
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
AL ++ D I ++ V+ LC+M + A +L+ I++G P FN++I
Sbjct: 410 -ALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLI 468
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
Y K +M A+E+L M S G+ PDV TY L++G +++ + +
Sbjct: 469 DGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCT 528
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ +TY+ LI +CK + A++L EMK G+ P++ LI LC
Sbjct: 529 PNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLC 577
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 148/336 (44%), Gaps = 16/336 (4%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
+ + GK + A VF + Y C + ++Y + L F A V +M + G PD
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPD 145
Query: 267 SEKVGKIISWFCKGGKAKEA-HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDM 325
+ FC G+ A ++ + + + S A +IS +E+ ++ A +
Sbjct: 146 VYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCA-VISGFYKENCQIE-AYHL 203
Query: 326 LDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSK 385
D+ + I F+ +I LC+ +V ++ L SK++ G P FN I +
Sbjct: 204 FDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCR 263
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
G + A +L+ + S GL PDV +Y L+ G+ ++ EA L++ + + T
Sbjct: 264 KGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFT 323
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC-------LKALDWRTA 498
Y+T+I G+CK A K+L + G P+ Y+ LI LC A+ +
Sbjct: 324 YNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAM 383
Query: 499 EK------LLEDMRLKGLHLNGITRALIRAVKELEE 528
EK +L + +KGL G+ ++ +K++ E
Sbjct: 384 EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMME 419
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 121/292 (41%), Gaps = 37/292 (12%)
Query: 235 YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR 294
Y ++ LS++ + A + + M+E G PD +++ CK G +A+ + A
Sbjct: 394 YNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAI 453
Query: 295 EKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDV 354
K P LI C++ K A+++LD + +++++ LC+ + +
Sbjct: 454 AKGCIPDIFTFNTLIDGYCKQRNMDK-AIEILDTMLSHGITPDVITYNTLLNGLCKARKL 512
Query: 355 HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
M+ +G P +N +I ++ K ++ AME+ K M++RGL PD+ T L
Sbjct: 513 DNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTL 572
Query: 415 MSGYANGGQMEEACEILNEAKKNH----------------------------------SR 440
+ G + G++++A E+ +K + S
Sbjct: 573 ICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSD 632
Query: 441 LSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
+P TY +I YCK D A L E G+ P+ K++ LC+
Sbjct: 633 CAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCV 684
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 114/285 (40%), Gaps = 12/285 (4%)
Query: 155 WVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLT-VEILNELIALFSKLGKG 213
W + VV+ L K C S L D + KG + + N LI + K
Sbjct: 427 WTYNLVVNGLCKMGCLSDANG---ILNDAI------AKGCIPDIFTFNTLIDGYCKQRNM 477
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
A E+ + +G + TY + L + + D + M+E G P+ +
Sbjct: 478 DKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNIL 537
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEA 333
I FCK K EA ++ + + + P + LI LC E K A ++ E
Sbjct: 538 IESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDK-AYELFVTIEKEY 596
Query: 334 R-KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
+ Y+ F+ +I + C +V A+ L KM P N + +I +Y K G++ A
Sbjct: 597 KFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLA 656
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
L S+GL P T +++ ++ EA I+N +N
Sbjct: 657 HTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQN 701
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 9/180 (5%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+ ++R R V A + +M P +N++++ + G + A ++ M+
Sbjct: 79 YIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMK 138
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY----CKL 456
G+ PDVYT+T M + G+ A +LN + V+Y +I G+ C++
Sbjct: 139 DIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQI 198
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
E A L +EM G+ P++ +NKLI LC K + + +EKL + +G+ N T
Sbjct: 199 E----AYHLFDEMLKQGICPDILTFNKLIHVLCKKG-NVQESEKLFSKVMKRGVCPNLFT 253
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 127/262 (48%)
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH 287
C + TY + AL + FD A + +M+ G PD+ +I CK G ++A
Sbjct: 122 CAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAF 181
Query: 288 VVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRS 347
V ++ M + +I LC + +V+LA +L + + F+ VI
Sbjct: 182 RVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVING 241
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
C+ KD+ A LL MI +G P F +I+ KA + A ++L+ M G P+
Sbjct: 242 FCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPN 301
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
V TY+ +++G GQ+++A E+ ++ + + VT++ LI G CK + + A +L +
Sbjct: 302 VVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYH 361
Query: 468 EMKDVGVQPNVDEYNKLIQSLC 489
M++ G P++ YN LI LC
Sbjct: 362 RMRETGCAPDIITYNSLIDGLC 383
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 146/376 (38%), Gaps = 28/376 (7%)
Query: 141 TPLVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEIL 200
TP VL NLV + C + Y L +++ E G V V
Sbjct: 229 TPTVLMFNLV--------------INGFCKAKDLDSAYKLLEVMIEKG----CVPNVFTF 270
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
LI K + A ++ K GC N TY I L ++ D A+ + + M
Sbjct: 271 TILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMER 330
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC---QEDE 317
P+ +I CK + +EA +Y RE P LI LC Q DE
Sbjct: 331 RNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDE 390
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
+L + + A +L RM D A + S ++ +G P A +
Sbjct: 391 AFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMAD---ACRIFSMLVDKGFSPDLATYT 447
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
S+I Y K +E+++ M S+G P V T + ++ G G E A ++ +
Sbjct: 448 SLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAAR 507
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM---KDVGVQPNVDEYNKLIQSLCLKALD 494
+ Y+ ++ G + + D AL +L ++ +D P+ + L++SLC +
Sbjct: 508 GCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLC-QVGK 566
Query: 495 WRTAEKLLEDMRLKGL 510
A++LL M +G
Sbjct: 567 TDDAKQLLHKMSERGF 582
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 112/288 (38%), Gaps = 71/288 (24%)
Query: 200 LNELIALFSKLGKG---KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+N L A+ L +G + A ++F+ GC + Y +E ++R D A +V E
Sbjct: 478 VNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLE 537
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
++I+ R++K P S V L+ SLCQ
Sbjct: 538 QVIDK--------------------------------RDRKFNPSSSAVDALVESLCQVG 565
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+T A +L S A+ ++ ++ L R++ A + M+S GP P +
Sbjct: 566 KTDD-AKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTV 624
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N VIS A + A E+++ M G PD+ E C
Sbjct: 625 NVVISWLCSAAKVDDAYELVQRMSKLGCCPDI-----------------ETC-------- 659
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
+TLI GYCK D A KLL EM + G++PN ++ L
Sbjct: 660 ----------NTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 697
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 131/308 (42%), Gaps = 16/308 (5%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
K G+ A+E+F C N T+ I+ L + K + A + +M ETG PD
Sbjct: 312 LCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPD 371
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI----SSLCQEDETVKLA 322
+I CK + EA ++ E + +V + ++L + + ++
Sbjct: 372 IITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRI- 430
Query: 323 LDMLDD--FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
ML D FS + Y +S+I C+ L+ +M S+G PP ++V+
Sbjct: 431 FSMLVDKGFSPDLATY-----TSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVL 485
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA-KKNHS 439
+ A+++ M +RG D Y ++ G A + ++A +L + K
Sbjct: 486 GGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDR 545
Query: 440 RLSPVT--YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
+ +P + L+ C++ + D A +LL++M + G V YN+L+ L + W
Sbjct: 546 KFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLS-RLQRWDE 604
Query: 498 AEKLLEDM 505
A ++ E M
Sbjct: 605 ATQVFEAM 612
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 80/163 (49%), Gaps = 2/163 (1%)
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
LCR+ A L ++ P + +I +S AGD+ A+++L+ M+S G + +
Sbjct: 32 LCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGN 91
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
+T LM G + G++ EA E K+ + +TY L+ CK +FD A +L
Sbjct: 92 AVVHTTLMKGLCDAGRVVEALEHFRAMAKDCAP-DVMTYTALVHALCKAGKFDEAQGMLR 150
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
EM G P+ ++ LI LC K A ++LED+ +G+
Sbjct: 151 EMVAQGCAPDTVTFSTLIDGLC-KFGSEEQAFRVLEDVIQRGM 192
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 147/363 (40%), Gaps = 10/363 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ +C + +E L+ ++E G + N LI K + AF++F
Sbjct: 341 NILIDGLCKAKRIEEARQLYHRMRETGCAPD----IITYNSLIDGLCKSFQVDEAFQLFQ 396
Query: 222 KFGDYGC-VANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ G AN TY + A + +++ G PD +I +CK
Sbjct: 397 TIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKT 456
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
+A E + K P + ++ ++ L + + T + A+ + D +
Sbjct: 457 SRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTER-AIQLFDSMAARGCTDDALI 515
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGP---PPGNAVFNSVISAYSKAGDMTPAMEMLK 397
++ V+ + R A +L ++I + P ++ ++++ + + G A ++L
Sbjct: 516 YNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLH 575
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M RG V +Y L+SG + + +EA ++ T + +I C
Sbjct: 576 KMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAA 635
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITR 517
+ D A +L+ M +G P+++ N LI C K+ A KLLE+M GL N T
Sbjct: 636 KVDDAYELVQRMSKLGCCPDIETCNTLIGGYC-KSGRADLARKLLEEMTEAGLEPNDTTH 694
Query: 518 ALI 520
L+
Sbjct: 695 DLL 697
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 11/204 (5%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+ +IR D+ A LL +M S G V +++ AG + A+E + M
Sbjct: 60 YGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM- 118
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
++ PDV TYT L+ G+ +EA +L E VT+ TLI G CK +
Sbjct: 119 AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEE 178
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG---------LH 511
A ++L ++ G+ + + +IQ LC K A K+L + KG L
Sbjct: 179 QAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLV 238
Query: 512 LNGITRAL-IRAVKELEEDAIENG 534
+NG +A + + +L E IE G
Sbjct: 239 INGFCKAKDLDSAYKLLEVMIEKG 262
>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Brachypodium distachyon]
Length = 886
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 150/300 (50%), Gaps = 2/300 (0%)
Query: 192 KGVLTVEI-LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDW 250
+GV E+ L+ F + + A E+ G V ++ F ++ L ++ +
Sbjct: 261 RGVAADEVTCRTLVYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEE 320
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A+ + ++ E +P+ +++ CK G EA + +K + P + A LI
Sbjct: 321 AFRLACQLGELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIH 380
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
SLC+ + AL MLD + + + P++S+I C+ D+ A LS+M+ G
Sbjct: 381 SLCKRG-MMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLT 439
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P A ++ VI+ + GD++ A+E+ + M +G+ + YT+T L++G+ +M+EA +
Sbjct: 440 PNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRL 499
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
N+ +++ + VT++ +I GYC + + A +L ++M G+ P+ Y LI LCL
Sbjct: 500 FNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCL 559
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 140/315 (44%), Gaps = 2/315 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+ K G A + N+ D G N+ TY I +L +R + D A + ++M E
Sbjct: 341 NALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMRE 400
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G +I+ CK A + E + P + + +I+ LC++ + +
Sbjct: 401 KGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGD-LS 459
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A+++ + + + F+++I C+ K + A L +KM P FN+VI
Sbjct: 460 GAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVI 519
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
Y GD+ A ++ M RGL PD YTY L+SG +A E + + + N S
Sbjct: 520 EGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSV 579
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
L+ + L+ G+C+ A + NEM G + ++ + ++ + LK D +
Sbjct: 580 LNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYA-ALKQHDSEKSCV 638
Query: 501 LLEDMRLKGLHLNGI 515
L +M+ KG+ + +
Sbjct: 639 LFREMKEKGVRPDNV 653
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 139/317 (43%), Gaps = 12/317 (3%)
Query: 206 LFS--KLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGS 263
LFS K+ + A +F+ G + ++ Y I A + D A + +M + G
Sbjct: 169 LFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGAKGLVARMQDEGD 228
Query: 264 LPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLAL 323
+ +I CK + +EA V + + + L+ C+ +E L
Sbjct: 229 KVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGFCRTEE-----L 283
Query: 324 DMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
DM + +G+ + P S ++ L + V A L ++ P +N++
Sbjct: 284 DMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNAL 343
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
++ K G + A ++ M +GL+P+ TY L+ G M++A +L+ ++
Sbjct: 344 LNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGV 403
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
R++ Y++LI CK ++ D A+ L+EM ++G+ PN Y+ +I LC K D A
Sbjct: 404 RMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKG-DLSGAV 462
Query: 500 KLLEDMRLKGLHLNGIT 516
+L M KG+ N T
Sbjct: 463 ELHRKMAEKGVAWNTYT 479
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 136/376 (36%), Gaps = 69/376 (18%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+IA + G A E+ K + G N T+ I + K D A + KM E+
Sbjct: 448 VIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESN 507
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK-- 320
P+ +I +C G ++A +Y + + P LIS LC D K
Sbjct: 508 LEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAK 567
Query: 321 -LALDM---------------LDDFSGEAR----------------KYAIKPFSSVIRSL 348
D+ L F E R K + F+ ++ +
Sbjct: 568 EFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAA 627
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
+ D + L +M +G P N +I+ YSK G+M A+ M + G P+
Sbjct: 628 LKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNT 687
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYH--------------------- 447
TYT L++ + A + E +H + T++
Sbjct: 688 VTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFA 747
Query: 448 -------------TLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
TLI+G+CK+ + A+ L++ + G P+ Y+ +I LC K D
Sbjct: 748 MLQGFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIHELCKKG-D 806
Query: 495 WRTAEKLLEDMRLKGL 510
A +L +M KG+
Sbjct: 807 INEAIELWNEMLYKGV 822
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/359 (19%), Positives = 151/359 (42%), Gaps = 41/359 (11%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+ C + E L++ + E + V N +I + +G + AF+++++
Sbjct: 482 ALINGFCKAKKMDEASRLFNKMTESNLEPNEV----TFNAVIEGYCLVGDIRKAFQLYDQ 537
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + TY I L A + S+ + + ++ FC+ G+
Sbjct: 538 MMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGR 597
Query: 283 AKEAH-----------------------------------VVYTLAREKKMYPPQSVVAF 307
EA+ V++ +EK + P
Sbjct: 598 LTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTC 657
Query: 308 LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
+I+ +E V+ AL+ D+ + +++++ +LC+ + A+ L +M++
Sbjct: 658 MINMYSKEGNMVQ-ALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLAS 716
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
P + FN + ++ G++ A ++ M +G ++ + L+ G+ GQ++EA
Sbjct: 717 HFLPNSYTFNCFLDYFATEGNLETAKDLYFAML-QGFLANIVSVNTLIKGFCKVGQIQEA 775
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
++++ + +N ++Y T+I CK + + A++L NEM GV+P++ YN LI+
Sbjct: 776 IDLISRSTENGFFPDCISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIR 834
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 90/214 (42%), Gaps = 36/214 (16%)
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
S ++ SL +++ A+ L M+ G V+ + I AY + ++ A ++ M+
Sbjct: 166 SQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGAKGLVARMQD 225
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G K Y L+ G ++ EA ++ N VT TL+ G+C+ EE D
Sbjct: 226 EGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGFCRTEELDM 285
Query: 462 ALKLLNEMKDVG-----------------------------------VQPNVDEYNKLIQ 486
AL++ +M +G + PN+ YN L+
Sbjct: 286 ALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLN 345
Query: 487 SLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
++C + + A++L+ +M KGL N +T A++
Sbjct: 346 NMCKNGM-FSEADRLVNEMSDKGLEPNEVTYAIL 378
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 106/260 (40%), Gaps = 16/260 (6%)
Query: 161 VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGK--GKAAFE 218
+ ALL C E Y +W+ + G K +++++ I +++ L + + +
Sbjct: 585 LTALLHGFCREGRLTEAYHVWNEMAMWGGK------LDLISFTIIVYAALKQHDSEKSCV 638
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+F + + G + + I S+ A + ++MI G LP++ +++ C
Sbjct: 639 LFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLC 698
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED--ETVK-LALDMLDDFSGEARK 335
K A ++ P + E ET K L ML F
Sbjct: 699 KSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAMLQGFLAN--- 755
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
I +++I+ C++ + A L+S+ G P +++VI K GD+ A+E+
Sbjct: 756 --IVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIHELCKKGDINEAIEL 813
Query: 396 LKLMRSRGLKPDVYTYTGLM 415
M +G+KPD+ Y L+
Sbjct: 814 WNEMLYKGVKPDIVAYNILI 833
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 63/149 (42%), Gaps = 2/149 (1%)
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
S+Y + A +L L S G+ PD +T + ++ Q A + + +
Sbjct: 135 SSYLRLRRARDAAAVLHLSLSAGIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVL 194
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
L Y IR YC++ D A L+ M+D G + + YN LI LC K R A
Sbjct: 195 LDEYVYTAGIRAYCEVRNLDGAKGLVARMQDEGDKVSAVPYNVLIYGLC-KNQRVREAVD 253
Query: 501 LLEDMRLKGLHLNGIT-RALIRAVKELEE 528
+ M +G+ + +T R L+ EE
Sbjct: 254 VKNSMLARGVAADEVTCRTLVYGFCRTEE 282
>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 825
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 143/320 (44%), Gaps = 9/320 (2%)
Query: 193 GVLTVEILNELIALFSKLGKGKAAF-EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWA 251
GV T +L + + ++G+ +A E+ NK G V N TY I L + FD
Sbjct: 195 GVHTYTVLLDGLCKVRRVGEAEALLGEMVNK----GVVPNVVTYNALIGGLCQEGRFDDV 250
Query: 252 WSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISS 311
+ EKM PD +++ CK GK V A K + LI+
Sbjct: 251 TKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALING 310
Query: 312 LCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
C+ + +K ALD+L ++ F+ VI C VH A L++M G P
Sbjct: 311 YCKGGD-MKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSP 369
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
FNS+IS G+ A+ +L LM G+ PD TY + + GQ+EEA +
Sbjct: 370 NTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLF 429
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC-L 490
+ + V Y +L+ GYC++ + D A L+ +M P+V YN LI LC +
Sbjct: 430 SCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKV 489
Query: 491 KALDWRTAEKLLEDMRLKGL 510
K LD A LL+ M+ +G+
Sbjct: 490 KRLD--RAIDLLDKMKKQGI 507
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 134/294 (45%), Gaps = 10/294 (3%)
Query: 226 YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKE 285
+G ++ +Y I+ L D A V KM P ++ CK + E
Sbjct: 155 WGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGE 214
Query: 286 AHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFS 342
A + K + P LI LCQE D+ KL L+ + ++
Sbjct: 215 AEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKL----LEKMEIQRHSPDCWTYT 270
Query: 343 SVIRSLCRMKDV-HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
V+ LC+ V HGAK +L + I +G +N++I+ Y K GDM A+++L+LM+
Sbjct: 271 QVVHGLCKHGKVGHGAK-VLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKR 329
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
+ P V T+ ++ G+ GG++ +A L + + VT+++LI G C + E
Sbjct: 330 NRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKI 389
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
AL+LL+ M++ GV P+ Y I +LC + A L + +KG+ + +
Sbjct: 390 ALRLLDLMEEYGVLPDRQTYAIFIDALCDEG-QLEEAHSLFSCLPMKGIKAHNV 442
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 139/325 (42%), Gaps = 20/325 (6%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDY---GCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
LIA S+ + + FG G N+ TY I A + + A + +M
Sbjct: 58 LIAYSSRGSRAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMR 117
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYT-LAREKKMYPPQSVVAFLISSLCQEDET 318
E G PD+ ++ C+ G A ++ + R + LI LC
Sbjct: 118 EAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLC----- 172
Query: 319 VKLALDMLDD----FSGEARKY---AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
A +DD F+ +R + + ++ ++ LC+++ V A+ LL +M+++G P
Sbjct: 173 ---AAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVP 229
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+N++I + G ++L+ M + PD +TYT ++ G G++ ++L
Sbjct: 230 NVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVL 289
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
+EA L +TY+ LI GYCK + AL +L MK V P V +N++I C
Sbjct: 290 HEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCG 349
Query: 492 ALDWRTAEKLLEDMRLKGLHLNGIT 516
A L M GL N +T
Sbjct: 350 G-KVHKAMAFLTQMAGAGLSPNTVT 373
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 150/368 (40%), Gaps = 26/368 (7%)
Query: 135 VLKVLETPLVLGENLVCFFKWVTSGVV--DALLKAICSSVGKKEVYALWDIVKEIGEKEK 192
V +V E +LGE + K V VV +AL+ +C +V L + + EI
Sbjct: 209 VRRVGEAEALLGEMV---NKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKM-EIQRHSP 264
Query: 193 GVLTVEILNELIALFSKLGKG-KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWA 251
T + + K+G G K E K G TY I + A
Sbjct: 265 DCWTYTQVVHGLCKHGKVGHGAKVLHEAIGK----GVALEVLTYNALINGYCKGGDMKAA 320
Query: 252 WSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISS 311
V + M P + ++I FC GGK +A T + P LIS
Sbjct: 321 LDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISG 380
Query: 312 LCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISE 367
C E K+AL +LD +Y + P ++ I +LC + A +L S + +
Sbjct: 381 QCSVGER-KIALRLLDLM----EEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMK 435
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G N ++ S++ Y + GD+ A +++ M S PDV+TY L+ G +++ A
Sbjct: 436 GIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRA 495
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
++L++ KK + T++ LI+ ++ A K+ +M G +P+ Y I +
Sbjct: 496 IDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKIST 555
Query: 488 LCLKALDW 495
DW
Sbjct: 556 ------DW 557
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 135/357 (37%), Gaps = 20/357 (5%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
+ A+C +E ++L+ + G K V I L+ + ++G +AF + K
Sbjct: 412 FIDALCDEGQLEEAHSLFSCLPMKGIKAHNV----IYTSLVHGYCQVGDIDSAFGLMEKM 467
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
C+ + TY I+ L + K D A + +KM + G P + +I K
Sbjct: 468 ASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKH 527
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA-IKPFS 342
+A +Y P + IS+ E T + +DM EA + ++ ++
Sbjct: 528 ADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYN 587
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS--------------KAGD 388
++I++ A KM+S P ++ +++ K D
Sbjct: 588 AIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVD 647
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHT 448
+ E+ + M P + TY L+ G N ++EE +L + + N L
Sbjct: 648 VRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDY 707
Query: 449 LIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
L+ YC LE + A + M QP + L+ LC + D A + DM
Sbjct: 708 LLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLC-DSGDHGMAVSIFSDM 763
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 147/320 (45%), Gaps = 2/320 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V N LI K + + A + + YG ++ T+ ++ D A + E
Sbjct: 203 VSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKE 262
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M+E G V +I+ FCK G+ +A A + P Q L++ LC+
Sbjct: 263 QMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIG 322
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
K A++++D I ++S+I LC++ ++ A +L +M+S P +
Sbjct: 323 HA-KHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTY 381
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N++IS+ K + A E+ +L+ S+G+ PDV T+ L+ G + A ++ E K
Sbjct: 382 NAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKG 441
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
R TY+ LI C + + AL LL EM+ G NV YN LI C K
Sbjct: 442 KGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFC-KNKRIE 500
Query: 497 TAEKLLEDMRLKGLHLNGIT 516
AE++ ++M L+G+ + +T
Sbjct: 501 EAEEIFDEMELQGVSRDSVT 520
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 142/306 (46%), Gaps = 2/306 (0%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G A + + +YGC T I ++ D A S ++ + G PD
Sbjct: 252 GNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTY 311
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
+++ CK G AK A V + P LIS LC+ E ++ A+ +LD
Sbjct: 312 NTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGE-IEEAVKILDQMV 370
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
++++I SLC+ V A + + S+G P FNS+I + +
Sbjct: 371 SRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHK 430
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
AM++ + M+ +G +PD +TY L+ + ++EEA +L E + N + V Y+TLI
Sbjct: 431 SAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLI 490
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
G+CK + + A ++ +EM+ GV + YN LI LC K+ A +L++ M ++GL
Sbjct: 491 DGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLC-KSKRVEDAAQLMDQMIMEGL 549
Query: 511 HLNGIT 516
+ T
Sbjct: 550 RPDKFT 555
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 137/324 (42%), Gaps = 36/324 (11%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI+ KLG+ + A ++ ++ C N TY I +L + D A + +
Sbjct: 347 NSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTS 406
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G LPD +I C K A ++ + K P + LI SLC ++
Sbjct: 407 KGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSS-RKLE 465
Query: 321 LALDMLDD--FSGEARKYAIK---------------------------------PFSSVI 345
AL++L + +G AR I ++++I
Sbjct: 466 EALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLI 525
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
LC+ K V A L+ +MI EG P +NS+++ + K GD+ A ++++ M S G
Sbjct: 526 DGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCN 585
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
PD+ TY L+SG G+++ A +L + L+P Y+ +I+ K A++L
Sbjct: 586 PDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRL 645
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLC 489
EM D P+ Y + + LC
Sbjct: 646 FREMLDKSEPPDAITYKIVYRGLC 669
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 92/182 (50%), Gaps = 1/182 (0%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
++ + F+ +I++LC+ V A ++ +M S G P F +++ Y + G++ A+
Sbjct: 200 RHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALR 259
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+ + M G T L++G+ G++++A + EA R TY+TL+ G C
Sbjct: 260 IKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLC 319
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG 514
K+ A+++++ M G+ P++ YN LI LC K + A K+L+ M + N
Sbjct: 320 KIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLC-KLGEIEEAVKILDQMVSRDCSPNA 378
Query: 515 IT 516
+T
Sbjct: 379 VT 380
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 133/311 (42%), Gaps = 8/311 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ ++CSS +++ +++KE+ E V I N LI F K + + A E+F+
Sbjct: 452 NMLIDSLCSS---RKLEEALNLLKEM-ELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFD 507
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ G + TY I+ L + K + A + ++MI G PD +++ FCK G
Sbjct: 508 EMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTG 567
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
K+A + P A LIS LC+ V++A +L + +
Sbjct: 568 DIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGR-VQVASRLLRSIQMKGMVLTPHAY 626
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD-MTPAMEMLKLMR 400
+ VI++L + H A L +M+ + PP + V G + A++ M
Sbjct: 627 NPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMI 686
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
RG P+ ++ L G M++ L + ++ S T IRG+ K+ +F
Sbjct: 687 ERGNIPEFSSFVMLAEGLCT-LSMDDTLVKLVDMIMEKAKFSEREIST-IRGFLKIRKFQ 744
Query: 461 CALKLLNEMKD 471
AL L + D
Sbjct: 745 DALSTLGGILD 755
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 153/315 (48%), Gaps = 3/315 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N+++ + KLG + A + +K + G + TY I +RK D A+ V +M
Sbjct: 222 NKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPL 281
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G + +I C + EA ++ ++ + +P LI SLC + +
Sbjct: 282 KGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSE 341
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
AL+++ + K I ++ +I SLC A+ LL +M+ +G P +N++I
Sbjct: 342 -ALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALI 400
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ Y K G + A+++++LM SR L P+ TY L+ GY + +A +LN+ +
Sbjct: 401 NGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVL 459
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
VTY++LI G C+ FD A +LL+ M D G+ P+ Y +I SLC K+ A
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC-KSKRVEEACD 518
Query: 501 LLEDMRLKGLHLNGI 515
L + + KG++ N +
Sbjct: 519 LFDSLEQKGVNPNVV 533
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 163/367 (44%), Gaps = 33/367 (8%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+K C K V+ ++ ++ E+ K + V N LI + G +A+ + +
Sbjct: 432 NELIKGYC----KSNVHKAMGVLNKMLER-KVLPDVVTYNSLIDGQCRSGNFDSAYRLLS 486
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
D G V +Q TY I++L + K + A + + + + G P+ +I +CK G
Sbjct: 487 LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAG 546
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
K EAH++ K P LI LC + + + L + K ++P
Sbjct: 547 KVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATL-----LEEKMVKIGLQPT 601
Query: 342 SS----VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
S +I L + D A + +M+S G P + + I Y + G + A +M+
Sbjct: 602 VSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMA 661
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
MR G+ PD++TY+ L+ GY + GQ A ++L + S T+ +LI+ +++
Sbjct: 662 KMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMK 721
Query: 458 ------------------EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
EFD ++LL +M + V PN Y KLI +C + + R AE
Sbjct: 722 YGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGIC-EVGNLRVAE 780
Query: 500 KLLEDMR 506
K+ + M+
Sbjct: 781 KVFDHMQ 787
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 129/274 (47%), Gaps = 2/274 (0%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A ++F K D C TY I++L + A ++ ++M ETG P+ +I
Sbjct: 307 AMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLID 366
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
C K ++A + EK + P LI+ C+ ++ A+D+++
Sbjct: 367 SLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRG-MIEDAVDVVELMESRKLS 425
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+ ++ +I+ C+ +VH A +L+KM+ P +NS+I ++G+ A +
Sbjct: 426 PNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
L LM RGL PD +TYT ++ ++EEAC++ + ++ + V Y LI GYCK
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ D A +L +M PN +N LI LC
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLC 578
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 140/334 (41%), Gaps = 38/334 (11%)
Query: 191 EKGVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
EKG++ V N LI + K G + A +V N TY I+ + +
Sbjct: 386 EKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHK 445
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A V KM+E LPD +I C+ G A+ + +L ++ + P Q +I
Sbjct: 446 -AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMI 504
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
SLC+ + V+ A D+ D + + ++++I C+ V A +L KM+S+
Sbjct: 505 DSLCKS-KRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNC 563
Query: 370 PPGNAVFNSVISAYS-----------------------------------KAGDMTPAME 394
P + FN++I K GD A
Sbjct: 564 LPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYS 623
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+ M S G KPD +TYT + Y G++ +A +++ + ++N TY +LI+GY
Sbjct: 624 RFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYG 683
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
L + + A +L M+D G +P+ + LI+ L
Sbjct: 684 DLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 161/372 (43%), Gaps = 22/372 (5%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
L+K++C S K E L ++E G K + LI K + A E+ +
Sbjct: 328 VLIKSLCGSERKSEALNLVKEMEETGIKP----NIHTYTVLIDSLCSQCKFEKARELLGQ 383
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ G + N TY I +R + + A V E M P++ ++I +CK
Sbjct: 384 MLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNV 443
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIK 339
K V+ + E+K+ P LI C+ D +L L +++D ++
Sbjct: 444 HKAMGVLNKML-ERKVLPDVVTYNSLIDGQCRSGNFDSAYRL-LSLMNDRGLVPDQWT-- 499
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
++S+I SLC+ K V A L + +G P ++ ++I Y KAG + A ML+ M
Sbjct: 500 -YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV--TYHTLIRGYCKLE 457
S+ P+ T+ L+ G G+++EA L E K L P T LI K
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEA--TLLEEKMVKIGLQPTVSTDTILIHRLLKDG 616
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL--KALDWRTAEKLLEDMRLKGLHLNGI 515
+FD A +M G +P+ Y IQ+ C + LD AE ++ MR G+ +
Sbjct: 617 DFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLD---AEDMMAKMRENGVSPDLF 673
Query: 516 T-RALIRAVKEL 526
T +LI+ +L
Sbjct: 674 TYSSLIKGYGDL 685
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 110/220 (50%), Gaps = 8/220 (3%)
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
DE ++ ++ML+D I ++ ++ C++ +V A +SK++ G P
Sbjct: 200 DEMKQVYMEMLEDKVCPN----IYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFT 255
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+ S+I Y + D+ A ++ M +G + + YT L+ G +++EA ++ + K
Sbjct: 256 YTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMK 315
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+ + TY LI+ C E AL L+ EM++ G++PN+ Y LI SLC + +
Sbjct: 316 DDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQC-KF 374
Query: 496 RTAEKLLEDMRLKGLHLNGIT-RALIRAV--KELEEDAIE 532
A +LL M KGL N IT ALI + + EDA++
Sbjct: 375 EKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVD 414
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 119/255 (46%), Gaps = 1/255 (0%)
Query: 235 YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR 294
Y + +L+R + D V +M+E P+ K+++ +CK G +EA+ +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 295 EKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDV 354
E + P LI CQ + + A + ++ + + ++ +I LC + +
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKD-LDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 355 HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
A L KM + P + +I + + + A+ ++K M G+KP+++TYT L
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 415 MSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV 474
+ + + E+A E+L + + + +TY+ LI GYCK + A+ ++ M+ +
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424
Query: 475 QPNVDEYNKLIQSLC 489
PN YN+LI+ C
Sbjct: 425 SPNTRTYNELIKGYC 439
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 97/268 (36%), Gaps = 53/268 (19%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIE------------------ALSR 244
LI + LG+ AF+V + D GC +Q T+ I+ A+S
Sbjct: 678 LIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSN 737
Query: 245 RKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSV 304
FD + EKM+E P+++ K+I C+ G + A V+ + + P +
Sbjct: 738 MMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSEL 797
Query: 305 VAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM 364
V F++++ C++K + A ++ M
Sbjct: 798 V-----------------------------------FNALLSCCCKLKKHNEAAKVVDDM 822
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
I G P +I K G+ + + + G D + ++ G G +
Sbjct: 823 ICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLV 882
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRG 452
E E+ N +KN + S TY LI G
Sbjct: 883 EAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 130/343 (37%), Gaps = 22/343 (6%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+AL+ +C+ KE L + + +IG + TV LI K G A+ F
Sbjct: 571 NALIHGLCADGKLKEATLLEEKMVKIGLQP----TVSTDTILIHRLLKDGDFDHAYSRFQ 626
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ G + TY I+ R A + KM E G PD +I + G
Sbjct: 627 QMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLG 686
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ---------EDETVKLA----LDMLDD 328
+ A V R+ P Q LI L + E E ++ D + +
Sbjct: 687 QTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVE 746
Query: 329 FSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMI-SEGPPPGNAVFNSVISAY 383
+ ++++ P + +I +C + ++ A+ + M +EG P VFN+++S
Sbjct: 747 LLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCC 806
Query: 384 SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
K A +++ M G P + + L+ G G+ E + +
Sbjct: 807 CKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDE 866
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
+ + +I G K + +L N M+ G + + Y+ LI+
Sbjct: 867 LAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIE 909
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 164/356 (46%), Gaps = 8/356 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ A C E + L D + G K G+ T N LI K G + A V +
Sbjct: 263 NTLVNAYCRRGLVSEAFGLVDCMAGKGLKP-GLFTY---NALINGLCKEGSYERAKRVLD 318
Query: 222 KFGDYGCVANQETYY-FTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ G N T+ +E+ + +++ A V +M++ G +PD I+ F +
Sbjct: 319 EMLGVGLCPNAATFNPMLVESCRKEDVWE-AERVFNEMLQRGVVPDLISFSSIVGVFSRN 377
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
G+ A + + + P + LI+ C+ D+ V AL M ++ +
Sbjct: 378 GELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDD-VSGALKMRNEMVERGCVMDVVT 436
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+++++ LCR K + A L +M+ G P ++I Y K G+MT A+ + + M
Sbjct: 437 YNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMT 496
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
R LKPDV TY LM G+ G+ME+A E+ + S +++ LI G+C L
Sbjct: 497 LRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVS 556
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A +L +EMK+ G++P + N +I+ L+A + A L M +G+ + IT
Sbjct: 557 EAFRLWDEMKEKGIKPTLVTCNTIIKGY-LRAGNLSKANDFLNTMISEGVPPDCIT 611
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 143/326 (43%), Gaps = 37/326 (11%)
Query: 189 EKEKGVLTVE---ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRR 245
EK KGV V I LI + + A ++ N+ + GCV + TY + L R
Sbjct: 388 EKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRG 447
Query: 246 KIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVV 305
K+ D A + ++M+E G PD + +I +CK G +A ++ + + P
Sbjct: 448 KMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTY 507
Query: 306 AFLISSLCQEDETVK---LALDMLD--------DFS-------------------GEARK 335
L+ C+ E K L DM+ FS E ++
Sbjct: 508 NTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKE 567
Query: 336 YAIKPF----SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
IKP +++I+ R ++ A L+ MISEG PP +N++I+++ K +
Sbjct: 568 KGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDR 627
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
A ++ M RGL P++ TY ++ G++ G+M+EA +L++ TY +LI
Sbjct: 628 AFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLIN 687
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPN 477
GY + A ++ +EM G P+
Sbjct: 688 GYVSKDNMKEAFRVHDEMLQRGFVPD 713
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 140/336 (41%), Gaps = 50/336 (14%)
Query: 209 KLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSE 268
KL +G AF++ K G CV+ + A+ + D AW V E +++G++ +
Sbjct: 169 KLREGSEAFQLLRKRG--FCVSINACNAL-LGAIVKVGWVDLAWKVYEDFVKSGNIVNVY 225
Query: 269 KVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDD 328
+ +++ CK GK V + EK +Y L+++ C+ V A ++D
Sbjct: 226 TLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG-LVSEAFGLVDC 284
Query: 329 FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD 388
+G+ K + ++++I LC+ AK +L +M+ G P A FN ++ + D
Sbjct: 285 MAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKED 344
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHT 448
+ A + M RG+ PD+ +++ ++ ++ G++ A
Sbjct: 345 VWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRA--------------------- 383
Query: 449 LIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLK 508
L +MK VG+ P+ Y LI C + D A K+ +M +
Sbjct: 384 --------------LAYFEKMKGVGLVPDTVIYTILINGYC-RNDDVSGALKMRNEMVER 428
Query: 509 GL---------HLNGITRA-LIRAVKELEEDAIENG 534
G LNG+ R ++ EL ++ +E G
Sbjct: 429 GCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERG 464
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 101/213 (47%), Gaps = 1/213 (0%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
+I + + K +E + L R++ + L+ ++ + V LA + +DF
Sbjct: 160 LIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVG-WVDLAWKVYEDFVKS 218
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
+ + ++ +LC+ + LS+M +G +N++++AY + G ++ A
Sbjct: 219 GNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEA 278
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
++ M +GLKP ++TY L++G G E A +L+E + T++ ++
Sbjct: 279 FGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVE 338
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
C+ E+ A ++ NEM GV P++ ++ ++
Sbjct: 339 SCRKEDVWEAERVFNEMLQRGVVPDLISFSSIV 371
>gi|242039913|ref|XP_002467351.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
gi|241921205|gb|EER94349.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
Length = 846
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 154/337 (45%), Gaps = 41/337 (12%)
Query: 181 WDIVKEIGEKEKGV-LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI 239
W++++ G E+G L+V N LIA +SK G + AFE++ G + T+ + I
Sbjct: 411 WELLR--GAIEQGAPLSVTGFNALIAAYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLI 468
Query: 240 EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
L + D A + E M+ G + C +E + V L
Sbjct: 469 MGLCNQGRLDEAQLLLEHMVSKGYCLSTSFT------ICLDASFREGNAVCALK------ 516
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
C +D KL L DF FS+ I LCR+ V+ A
Sbjct: 517 -------------CWDDMG-KLGLQ--PDFIA---------FSAYINGLCRLDYVNEAYQ 551
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
++M + G P N +NS+ISA +AG+MT A+++ + MR GL PD+YT L+ G
Sbjct: 552 AFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILIDGLC 611
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
G++E +L + N VTY+T+I YC+ ++ + A+ +N+M G +P++
Sbjct: 612 REGKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAGCEPDIF 671
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
YN + SLC + A K+L+++ G + +T
Sbjct: 672 TYNIWMHSLCSNHM-LNQAGKVLDELVAMGCPPDSVT 707
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 159/397 (40%), Gaps = 48/397 (12%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+A++ C + L I+ E G V V N LI G + AF++F
Sbjct: 223 NAMILGFCHRGLVRVASGLLGIMGEFGI----VPNVCSYNILIKGHCVFGWSRDAFKLFE 278
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ GC TY ++ L A + ++M + G ++ +I + K G
Sbjct: 279 EMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITFNVLIDGYAKTG 338
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ +A Y + + + P + + + +L D D F +
Sbjct: 339 RMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLVHDH-DMFGSHMLADGMDML 397
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+ CR+ D A LL I +G P FN++I+AYSK G A E+ ++M
Sbjct: 398 VCRLCWDCRLDD---AWELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAFELYRIMNK 454
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD- 460
GL P T+ L+ G N G+++EA ++L E H + +GYC F
Sbjct: 455 LGLAPSSSTFNYLIMGLCNQGRLDEA-QLLLE-------------HMVSKGYCLSTSFTI 500
Query: 461 ------------CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW-RTAEKLLEDMRL 507
CALK ++M +G+QP+ ++ I LC LD+ A + +M
Sbjct: 501 CLDASFREGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLC--RLDYVNEAYQAFAEMTA 558
Query: 508 KGL-----HLNGITRALIRA-----VKELEEDAIENG 534
+G+ N I AL RA +L+++ +NG
Sbjct: 559 RGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNG 595
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 134/335 (40%), Gaps = 57/335 (17%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G A + ++ G G + + I L R + A+ +M G +P++
Sbjct: 509 GNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNFTY 568
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
IIS C+ G EA + R+ + P LI LC+E + L+M+D+
Sbjct: 569 NSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILIDGLCREGK-----LEMVDNLL 623
Query: 331 GEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
+ + P ++++I + CR KD++ A ++KM++
Sbjct: 624 LDMCSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAA------------------- 664
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
G +PD++TY M + + +A ++L+E VTY
Sbjct: 665 ----------------GCEPDIFTYNIWMHSLCSNHMLNQAGKVLDELVAMGCPPDSVTY 708
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC-----LKALDWRTAEKL 501
+TL+ G C + D A+ L + + QPN N + C +AL W AEKL
Sbjct: 709 NTLMDGICS-DVLDRAMILTGRLIKMAFQPNTITLNVFLSHFCKQGFGKRALMW--AEKL 765
Query: 502 LEDMRLKGLHLNGITRALIR-AVKELEEDAIENGE 535
ED + TR +I A +ELE+D N E
Sbjct: 766 RED----SFVFDDATRNIIDWARRELEDDPHANNE 796
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 117/292 (40%), Gaps = 36/292 (12%)
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
AW+V E+M G P +I FC G + A + + E + P LI
Sbjct: 203 AWNVFEEMAARGPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIK 262
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
C + + A + ++ + + ++ ++ LC + A+ L +M G
Sbjct: 263 GHCVFGWS-RDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQ 321
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG---YANGGQ---- 423
FN +I Y+K G M A + M++RGL PD T+ + +G + + Q
Sbjct: 322 ANTITFNVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLVHD 381
Query: 424 -------------------------MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
+++A E+L A + + LS ++ LI Y K
Sbjct: 382 HDMFGSHMLADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIAAYSKEGL 441
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA-LDWRTAEKLLEDMRLKG 509
+ A +L M +G+ P+ +N LI LC + LD A+ LLE M KG
Sbjct: 442 HEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLD--EAQLLLEHMVSKG 491
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%)
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
R +VH A + +M + GP P A FN++I + G + A +L +M G+ P+V
Sbjct: 196 RSGEVHAAWNVFEEMAARGPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVC 255
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
+Y L+ G+ G +A ++ E ++ + VTY+ L+ C A +L +EM
Sbjct: 256 SYNILIKGHCVFGWSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEM 315
Query: 470 KDVGVQPNVDEYNKLI 485
VG+Q N +N LI
Sbjct: 316 AQVGIQANTITFNVLI 331
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 59/131 (45%), Gaps = 3/131 (2%)
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+ A+ AG A+++L +R G P + L+ G++ A + E
Sbjct: 156 LHAFLAAGMAAEALDVLTRVRRSGKTPSLSALAALLRLLFRSGEVHAAWNVFEEMAARGP 215
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW-RTA 498
R S T++ +I G+C A LL M + G+ PNV YN LI+ C+ W R A
Sbjct: 216 RPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCV--FGWSRDA 273
Query: 499 EKLLEDMRLKG 509
KL E+M G
Sbjct: 274 FKLFEEMHRSG 284
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 157/358 (43%), Gaps = 6/358 (1%)
Query: 159 GVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFE 218
G++ L+ +C + LW + E G V T N LI K G + A
Sbjct: 457 GLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTT----NALIHGLCKTGNMQEAVR 512
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+ K + G V ++ TY I + + + + +M++ G PD+ +I C
Sbjct: 513 LLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMC 572
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
+ GK EA ++ + + + P +I C+ D+ ++ + + + +
Sbjct: 573 RIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADK-IEEGEKLFTELLTQNLELNS 631
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
++++IR+ CR + A L M S+G PP A ++S+I G M A ++
Sbjct: 632 VVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDE 691
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
MR GL P+V YT L+ GY GQM++ +L E + +TY +I GY K +
Sbjct: 692 MRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGD 751
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A KLL+EM G+ P+ YN L C K K+ + M +GL L+ IT
Sbjct: 752 MKTAAKLLHEMVGKGIVPDTVTYNVLTNGFC-KEGKIEEGFKICDYMSQEGLPLDEIT 808
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 156/348 (44%), Gaps = 18/348 (5%)
Query: 184 VKEIGEKEKGVLTVEILNELIAL-FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEAL 242
+ E+GE V V++L + F +G + A VF + G +T F + +L
Sbjct: 164 LNEVGESGVAVAAVDLLIHVYCTQFRNVGF-RNAIGVFRFLANKGVFPTVKTCTFLLSSL 222
Query: 243 SRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQ 302
+ + ++ V E M G PD I+ FCKGGK ++A ++ + + P
Sbjct: 223 VKANELEKSYWVFETM-RQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNV 281
Query: 303 SVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
LI LC+ DE + M+ D + +S +I L +++ + A +
Sbjct: 282 VTYNNLIHGLCKHGNLDEAFRFKEKMVKD----GVNATLITYSVLINGLMKLEKFNEANS 337
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
+L + + +G P V+N++I Y K G++ A+ + M S+G+ P+ T ++ G+
Sbjct: 338 VLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFC 397
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
GQME+A IL E ++P + T+I C F+ AL+ L EM ++PN
Sbjct: 398 KIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDG 457
Query: 480 EYNKLIQSLCLKALDWRTAE---KLLEDMRLKGLHLNGI-TRALIRAV 523
L+ LC + E +LLE KG N + T ALI +
Sbjct: 458 LLTTLVGGLCKEGKHSDAVELWFRLLE----KGFGANLVTTNALIHGL 501
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 143/325 (44%), Gaps = 5/325 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+AL+ +C + +E L + E G VL N LI+ K GK + F++
Sbjct: 495 NALIHGLCKTGNMQEAVRLLKKMLERGF----VLDKITYNTLISGCCKEGKVEEGFKLRG 550
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ G + TY I + R D A ++ + +P+ G +I +CK
Sbjct: 551 EMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKAD 610
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
K +E ++T + + V LI + C+ TV+ A + DD + +
Sbjct: 611 KIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVE-AFKLHDDMRSKGIPPTTATY 669
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
SS+I +C + + AK L+ +M EG P + ++I Y K G M + +L+ M S
Sbjct: 670 SSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSS 729
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
+ P+ TYT ++ GY+ G M+ A ++L+E VTY+ L G+CK + +
Sbjct: 730 YDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEE 789
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQ 486
K+ + M G+ + Y L+
Sbjct: 790 GFKICDYMSQEGLPLDEITYTTLVH 814
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 150/350 (42%), Gaps = 29/350 (8%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI K G AF K G A TY I L + + F+ A SV ++ +E
Sbjct: 285 NNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLE 344
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC---QEDE 317
G P+ +I +CK G +A + K + P + +I C Q ++
Sbjct: 345 KGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQ 404
Query: 318 TVKLALDMLDDFSGEARKYAIKP--FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ +ML +R ++I P F+++I LC A L +M+ P + +
Sbjct: 405 AECILEEML------SRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGL 458
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+++ K G + A+E+ + +G ++ T L+ G G M+EA +L +
Sbjct: 459 LTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKML 518
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC-LKALD 494
+ L +TY+TLI G CK + + KL EM G++P+ YN LI +C + LD
Sbjct: 519 ERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLD 578
Query: 495 -----WR--TAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIENGEAL 537
W + L+ ++ G+ ++G +A D IE GE L
Sbjct: 579 EAVNLWNECKSRDLVPNVYTYGVMIDGYCKA----------DKIEEGEKL 618
>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
Length = 550
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 168/387 (43%), Gaps = 52/387 (13%)
Query: 174 KKEVYALWDIVK---EIGEKEKG--VL----------TVEILNELIALFSKLGKGKAAFE 218
K +VY+ ++K E+G +KG VL V + LI K G + +
Sbjct: 148 KLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQ 207
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+F K G+ VANQ TY I + + + EKM TG +P+ +I C
Sbjct: 208 LFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCC 267
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
GK A ++ RE+ + LI LCQE ++ A ++ + +
Sbjct: 268 NDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLE-AERLMCRMKRDGLSPNL 326
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
++++I C + ++ A +L ++M S G P A +N +I+ +S+A + +M++
Sbjct: 327 ISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVRE 386
Query: 399 MRSRGLKP-----------------------------------DVYTYTGLMSGYANGGQ 423
M +RGL P D+Y Y L+ G G
Sbjct: 387 MEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGD 446
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
M+EA ++ + H + + V Y+T+I GYCK AL+LL EM + G+ PNV YN
Sbjct: 447 MKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNS 506
Query: 484 LIQSLCLKALDWRTAEKLLEDMRLKGL 510
I LC K W AE LL+DM GL
Sbjct: 507 TIXILC-KDEKWTEAEVLLKDMIELGL 532
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 121/278 (43%), Gaps = 17/278 (6%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
I A R ++ + A +MI G +P S ++ K ++A V+ E K
Sbjct: 89 INAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFN---ETKG 145
Query: 299 YPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMK 352
V +F +I C+ LD + G+ + + P ++++I C+
Sbjct: 146 NVKLDVYSFGIMIKGCCEVG-----YLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNG 200
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT 412
D+ K L KM + +I+ + K G +E+ + M+ G+ P+VYTY
Sbjct: 201 DIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYN 260
Query: 413 GLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
++ N G++ A E+ +E ++ + VTY+TLI G C+ A +L+ MK
Sbjct: 261 SMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRD 320
Query: 473 GVQPNVDEYNKLIQSLC-LKALDWRTAEKLLEDMRLKG 509
G+ PN+ YN LI C + LD A L M+ G
Sbjct: 321 GLSPNLISYNTLIDGYCSIGNLD--KASSLFNQMKSSG 356
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 125/292 (42%), Gaps = 3/292 (1%)
Query: 194 VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSR-RKIFDWAW 252
V V N +I GK AFE+F++ + G N TY I L + R++ +
Sbjct: 253 VPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAER 312
Query: 253 SVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSL 312
+C +M G P+ +I +C G +A ++ + P + LI+
Sbjct: 313 LMC-RMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGF 371
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
+ + + DM+ + + ++ ++ +L R ++ A + S M G
Sbjct: 372 SEAKNSAGVT-DMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVAD 430
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
++ +I GDM A ++ K + LKP+ Y ++ GY G A +L
Sbjct: 431 IYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLK 490
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
E +N + +Y++ I CK E++ A LL +M ++G++P++ +N +
Sbjct: 491 EMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKPSISIWNMI 542
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 2/136 (1%)
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
P + ++I+A+ ++ A+ M RGL P T+ L+ E+A
Sbjct: 79 PTHVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWR 138
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ NE K N +L ++ +I+G C++ D ++L +M+++G+ PNV Y LI C
Sbjct: 139 VFNETKGN-VKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDG-C 196
Query: 490 LKALDWRTAEKLLEDM 505
K D ++L M
Sbjct: 197 CKNGDIERGKQLFYKM 212
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 154/327 (47%), Gaps = 5/327 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+++L CSS KE ++ G E V+T +L + + K G+ A ++F+
Sbjct: 270 NSILHGYCSSGQPKEAIGFLKKMRSDG-VEPDVVTYSLLMDYLC---KNGRCMEARKIFD 325
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G TY ++ + + + + M+ G PD +I + G
Sbjct: 326 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQG 385
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
K +A +V++ R++ + P +I LC+ V+ A+ + E +
Sbjct: 386 KVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGR-VEDAMLYFEQMIDEGLSPGNIVY 444
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+S+I LC A+ L+ +M+ G FNS+I ++ K G + + ++ +LM
Sbjct: 445 NSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVR 504
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+KP+V TY L++GY G+M+EA ++L+ + + VTY TLI GYCK+ +
Sbjct: 505 IGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMED 564
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSL 488
AL L EM+ GV P++ YN ++Q L
Sbjct: 565 ALVLFKEMESSGVSPDIITYNIILQGL 591
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 164/363 (45%), Gaps = 19/363 (5%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEI---GEKEKGVLTVEILNELIALFSKLGKGKAAFE 218
+ LLK +C +E L ++ + G V ++N F K G A+
Sbjct: 162 NILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVING----FFKEGDSDKAYS 217
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+++ D G + + TY I AL + + D A V M++ G +PD I+ +C
Sbjct: 218 TYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 277
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
G+ KEA R + P + L+ LC+ ++ A + D + K I
Sbjct: 278 SSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCME-ARKIFDSMTKRGLKPEI 336
Query: 339 KPFSSVIRSLCR---MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+ ++++ + ++HG LL M+ G P + VF+ +I AY+ G + AM +
Sbjct: 337 TTYGTLLQGYATKGALVEMHG---LLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLV 393
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGY 453
MR +GL P+ TY ++ G++E+A +L + LSP + Y++LI G
Sbjct: 394 FSKMRQQGLNPNAVTYGAVIGILCKSGRVEDA--MLYFEQMIDEGLSPGNIVYNSLIHGL 451
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
C +++ A +L+ EM D G+ N +N +I S C K +EKL E M G+ N
Sbjct: 452 CTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHC-KEGRVIESEKLFELMVRIGVKPN 510
Query: 514 GIT 516
IT
Sbjct: 511 VIT 513
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 142/300 (47%), Gaps = 17/300 (5%)
Query: 233 ETYYFTIE--ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
+ Y F+I A + + D A V KM + G P++ G +I CK G+ ++A + +
Sbjct: 370 DHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYF 429
Query: 291 TLAREKKMYPPQSVVAFLISSLC---QEDETVKLALDMLDDFSGEARKYAIKP--FSSVI 345
++ + P V LI LC + + +L L+MLD R + F+S+I
Sbjct: 430 EQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLD------RGICLNTIFFNSII 483
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
S C+ V ++ L M+ G P +N++I+ Y AG M AM++L M S GLK
Sbjct: 484 DSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLK 543
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
P+ TY+ L++GY +ME+A + E + + +TY+ +++G + A +L
Sbjct: 544 PNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 603
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL----LEDMRLKGLHLNGITRALIR 521
+ + G Q + YN ++ LC L + L D++L+ N + AL++
Sbjct: 604 YVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLK 663
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 144/331 (43%), Gaps = 24/331 (7%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSR-------RKIFDWAWS 253
N ++ + G+ K A K G + TY ++ L + RKIFD
Sbjct: 270 NSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFD---- 325
Query: 254 VCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC 313
M + G P+ G ++ + G E H + L ++P V + LI +
Sbjct: 326 ---SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 382
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
+ + + L FS + R+ + P + +VI LC+ V A +MI EG
Sbjct: 383 NQGKVDQAMLV----FS-KMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 437
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
PGN V+NS+I A E++ M RG+ + + ++ + G++ E+ +
Sbjct: 438 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 497
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + + + +TY+TLI GYC + D A+KLL+ M VG++PN Y+ LI C
Sbjct: 498 LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 557
Query: 490 LKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
K A L ++M G+ + IT +I
Sbjct: 558 -KISRMEDALVLFKEMESSGVSPDIITYNII 587
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 134/335 (40%), Gaps = 40/335 (11%)
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET---GSLPDSEKVGKIIS 275
V + + GC+ N +Y ++ L A + M + GS PD +I+
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
F K G + +A+ Y ++ + P +I++LC+ K A+++L+
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDK-AMEVLNTMVKNGVM 263
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
++S++ C A L KM S+G P ++ ++ K G A ++
Sbjct: 264 PDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKI 323
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA-----------------------CEILN 432
M RGLKP++ TY L+ GYA G + E C N
Sbjct: 324 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAN 383
Query: 433 EAKKNHSRL------------SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
+ K + + L + VTY +I CK + A+ +M D G+ P
Sbjct: 384 QGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIV 443
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
YN LI LC W AE+L+ +M +G+ LN I
Sbjct: 444 YNSLIHGLC-TCNKWERAEELILEMLDRGICLNTI 477
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 118/282 (41%), Gaps = 6/282 (2%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA-HVVYTL 292
TY I R D ++ +I+ G D+ ++ C + +A +V
Sbjct: 89 TYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 148
Query: 293 AREKKMYPPQSVVAFLISSLCQED---ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLC 349
E P L+ LC E+ E ++L L M+ D G + +++VI
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALEL-LHMMADDRGGGSPPDVVSYTTVINGFF 207
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
+ D A + +M+ G P +NS+I+A KA M AME+L M G+ PD
Sbjct: 208 KEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCM 267
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
TY ++ GY + GQ +EA L + + + VTY L+ CK A K+ + M
Sbjct: 268 TYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327
Query: 470 KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH 511
G++P + Y L+Q K LL+ M G+H
Sbjct: 328 TKRGLKPEITTYGTLLQGYATKGA-LVEMHGLLDLMVRNGIH 368
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 49/262 (18%), Positives = 98/262 (37%), Gaps = 2/262 (0%)
Query: 191 EKGV-LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
++G+ L N +I K G+ + ++F G N TY I D
Sbjct: 469 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMD 528
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A + M+ G P++ +I+ +CK + ++A V++ + P ++
Sbjct: 529 EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
L Q T A ++ + + + ++ ++ LC+ K A + +
Sbjct: 589 QGLFQTRRTAA-AKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDL 647
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
FN +I A K G A ++ S GL P+ +TY + G +EE +
Sbjct: 648 KLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQ 707
Query: 430 ILNEAKKNHSRLSPVTYHTLIR 451
+ + N + + ++R
Sbjct: 708 LFLSMEDNGCTVDSGMLNFIVR 729
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 57/293 (19%), Positives = 115/293 (39%), Gaps = 7/293 (2%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+ N LI K + A E+ + D G N + I++ + + + E M
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELM 502
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+ G P+ +I+ +C GK EA + + + P + LI+ C+
Sbjct: 503 VRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISR- 561
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
++ AL + + I ++ +++ L + + AK L ++ G + +N
Sbjct: 562 MEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 621
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
++ K A++M + + LK + T+ ++ G+ +EA ++ N
Sbjct: 622 ILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNG 681
Query: 439 SRLSPVTYHTL---IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ TY + I G LEE D +L M+D G + N +++ L
Sbjct: 682 LVPNYWTYRLMAENIIGQGLLEELD---QLFLSMEDNGCTVDSGMLNFIVREL 731
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 140/321 (43%), Gaps = 2/321 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
LN LI F +L + F V K G T+ I L + F A + + M+
Sbjct: 13 LNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMV 72
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
G PD II+ CK G+ A ++ E + LI SLC+ V
Sbjct: 73 ARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKY-RRV 131
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
ALD+ + I ++S+I+ LC A LL++M S P FN +
Sbjct: 132 NEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVL 191
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+ + K G + A +LK M G++PDV TY LM GY+ ++ EA ++ +
Sbjct: 192 VDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGC 251
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
+ +Y LI GYCK + D A +L NEM G PN YN LI LC + R A+
Sbjct: 252 KPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLC-QLGRLREAQ 310
Query: 500 KLLEDMRLKGLHLNGITRALI 520
L ++M G N T A++
Sbjct: 311 DLFKNMHTNGNLPNLYTYAIL 331
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 133/294 (45%), Gaps = 1/294 (0%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
T+ LI K+GK A E+F+ GC + TY I L + A +
Sbjct: 44 TIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLF 103
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+KM E G + +I CK + EA +++ + K + P LI LC
Sbjct: 104 KKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNF 163
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
K A +L++ + + F+ ++ + C+ V A+ +L M G P
Sbjct: 164 SRW-KEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVT 222
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+NS++ YS ++ A ++ +M ++G KPDV++Y+ L++GY +++EA ++ NE
Sbjct: 223 YNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMI 282
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
S + V+Y+TLI G C+L A L M G PN+ Y L+ C
Sbjct: 283 HQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFC 336
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 129/299 (43%), Gaps = 1/299 (0%)
Query: 195 LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSV 254
L V + LI K + A ++F+ TY I+ L + A ++
Sbjct: 113 LNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASAL 172
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
+M +P+ ++ FCK GK A V E + P L+
Sbjct: 173 LNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSM 232
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
E V+ A + D + K + +S +I C+ K + AK L ++MI +G P N
Sbjct: 233 WTEVVE-ARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNV 291
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
+N++I + G + A ++ K M + G P++YTY L+ G+ G + +A +
Sbjct: 292 SYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAM 351
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
+ + + + V Y+ L+ CK A +L +E+ +G+QPNV Y +I LC + L
Sbjct: 352 QSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGL 410
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 136/318 (42%), Gaps = 19/318 (5%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L++ +C+ KE AL + + + V N L+ F K GK AA V
Sbjct: 155 SLIQGLCNFSRWKEASALLNEMTSLNIMPN----VVTFNVLVDTFCKEGKVLAAEGVLKT 210
Query: 223 FGDYGCVANQETYYFTI-------EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
+ G + TY + E + RK+FD MI G PD +I+
Sbjct: 211 MTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDV-------MITKGCKPDVFSYSILIN 263
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
+CK + EA ++ + P LI LCQ ++ A D+ +
Sbjct: 264 GYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGR-LREAQDLFKNMHTNGNL 322
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+ ++ ++ C+ + A L M S P ++N +++A K+G++ A E+
Sbjct: 323 PNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDAREL 382
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
+ GL+P+V YT +++G G ++EA E + + +Y+ +IRG+ +
Sbjct: 383 FSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQ 442
Query: 456 LEEFDCALKLLNEMKDVG 473
++ A+ L+ EM+D G
Sbjct: 443 HKDESRAVHLIGEMRDRG 460
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 59/122 (48%)
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P N +I+ + + + +L GL+P + T+T L++G G+ +A
Sbjct: 5 GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQA 64
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
E+ ++ + TY T+I G CK+ E A L +M++ G Q NV Y+ LI S
Sbjct: 65 VELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHS 124
Query: 488 LC 489
LC
Sbjct: 125 LC 126
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 90/208 (43%), Gaps = 1/208 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + K + A ++FN+ G N +Y I L + A + + M G
Sbjct: 261 LINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNG 320
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+LP+ ++ FCK G +A ++ + + P + L++++C+ +K A
Sbjct: 321 NLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGN-LKDA 379
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++ + + ++ ++++I LC+ + A M +G PP +N +I
Sbjct: 380 RELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRG 439
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ + D + A+ ++ MR RG D T
Sbjct: 440 FLQHKDESRAVHLIGEMRDRGFITDAGT 467
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 1/118 (0%)
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M GL P+ T L++ + +++ +L + K + + VT+ TLI G K+ +
Sbjct: 1 MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
F A++L ++M G QP+ Y +I LC K + A L + M G LN +T
Sbjct: 61 FAQAVELFDDMVARGCQPDDYTYTTIINGLC-KIGETALAAGLFKKMEEAGCQLNVVT 117
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 136/296 (45%), Gaps = 5/296 (1%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
T+ N L+ K+G+ + A ++ K D GC + TY I+ L + K A+ +
Sbjct: 199 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF 258
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
++M G + D+ +I + GK +A VY + P ++ +I LC+
Sbjct: 259 KEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKA 318
Query: 316 DETVKLALDMLDDFSGEARKYAIKP--FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
+ A+ + S EAR A +S++I LC+ + + A +L++M P
Sbjct: 319 GR-IGAAVRIFK--SMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 375
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+N +I K+GD+ A M G KPDVYTY L+SG+ G + AC + ++
Sbjct: 376 ITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDD 435
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+H + VTY TLI G CK + A MK+ G P+ Y+ L+ LC
Sbjct: 436 MSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLC 491
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 185/430 (43%), Gaps = 32/430 (7%)
Query: 113 SSVDGYLESSLDSFELDLHEDFVL-------KVLETPLVLGENLVCFFKWVTSGVVDALL 165
+++D + ++ + +D+H + K ++ + L E + T +ALL
Sbjct: 148 AAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALL 207
Query: 166 KAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGD 225
+C +G+ E D++++I + T +++ +L LGK K +FE + F +
Sbjct: 208 NGLCK-MGRLE--EAIDLLRKIVDNG---CTPDVVT-YTSLIDGLGKEKRSFEAYKLFKE 260
Query: 226 Y---GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G V + Y I L + A SV + M G +PD + +I CK G+
Sbjct: 261 MALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGR 320
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP-- 340
A ++ + + P + V + LI LC+ + + AL+ML + +K P
Sbjct: 321 IGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK-MDCALEML----AQMKKAFCTPDT 375
Query: 341 --FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
++ +I LC+ DV A+ +M+ G P +N ++S + KAG+ A +
Sbjct: 376 ITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDD 435
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M S P+V TY L+SG Q+ +A K+ Y +L+ G CK +
Sbjct: 436 MSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGK 495
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL----HLNG 514
+ L +EM+ GV N +LI LC KA A L +R +G+ N
Sbjct: 496 LEGGCMLFDEMERSGVA-NSQTRTRLIFHLC-KANRVDEAVSLFNAIRKEGMPHPYAYNS 553
Query: 515 ITRALIRAVK 524
I LI++ K
Sbjct: 554 IISTLIKSAK 563
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 145/357 (40%), Gaps = 41/357 (11%)
Query: 189 EKEKGVLTVEI-LNELIALFSKLGKGKAAFEVFNKFGD--YGCVANQETYYFTIEALSRR 245
E G L EI + ++ +F L A+E+F +G + T ++ +R
Sbjct: 13 EAAVGRLRREISTDAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFART 72
Query: 246 KIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH-VVYTLAREKKMYPPQSV 304
K A ++ + + T LPD E +I+ +C + +EA V+ + + + P
Sbjct: 73 KRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKT 132
Query: 305 VAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM 364
++ LC+ + V A+D + + I +++++ L + K + A L+ K+
Sbjct: 133 HNLVLHGLCKSGK-VLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKI 191
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA----- 419
+ G P A +N++++ K G + A+++L+ + G PDV TYT L+ G
Sbjct: 192 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRS 251
Query: 420 ------------------------------NGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
G++ +A + VT T+
Sbjct: 252 FEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 311
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
I G CK A+++ M+ G+ PN Y+ LI LC KA A ++L M+
Sbjct: 312 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLC-KARKMDCALEMLAQMK 367
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 141/308 (45%), Gaps = 2/308 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI LF++ GK A + +G V + Y I R + A V ++M+ G
Sbjct: 302 LIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCG 361
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
LPD +++ CK + +A + RE+ + P LI C E + K A
Sbjct: 362 CLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDK-A 420
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
L + D + + I ++++I +CR D+ A L M S P + ++ +I +
Sbjct: 421 LQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDS 480
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ + G + A L M ++G+ P++ TY ++ GY G + + + L + N
Sbjct: 481 HCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPD 540
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
+TY+TLI GY K ++ A KLLN M+ VQP+V YN LI + + + A +
Sbjct: 541 LITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHG-NVQEAGWIF 599
Query: 503 EDMRLKGL 510
E M KG+
Sbjct: 600 EKMCAKGI 607
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 155/336 (46%), Gaps = 12/336 (3%)
Query: 187 IGEKEKGVLTVEIL--NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSR 244
I E EK + +++ N ++ + G +AA + + G TY ++ L R
Sbjct: 179 ISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCR 238
Query: 245 RKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSV 304
++D AW V ++M + G PD +I FC+ G+ +EA +Y R + + P
Sbjct: 239 SGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVS 298
Query: 305 VAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTL 360
+ LI + + +D + E R + + P ++ VI CR + A +
Sbjct: 299 FSCLIGLFARRGK-----MDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRV 353
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
+M+ G P +N++++ K + A +L MR RG+ PD+ T+T L+ GY
Sbjct: 354 RDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCI 413
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
G++++A ++ + R VTY+TLI G C+ + D A L ++M + PN
Sbjct: 414 EGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVT 473
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
Y+ LI S C K A L++M KG+ N +T
Sbjct: 474 YSILIDSHCEKG-QVEDAFGFLDEMINKGILPNIMT 508
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 40/229 (17%)
Query: 321 LALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
L D +D E K + P + ++ + R D A L+ M+S+G PG +
Sbjct: 170 LEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTY 229
Query: 377 NSV-----------------------------------ISAYSKAGDMTPAMEMLKLMRS 401
NSV I + + G++ A+++ K MR
Sbjct: 230 NSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRH 289
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
RG+KPD+ +++ L+ +A G+M+ A L E + V Y +I G+C+
Sbjct: 290 RGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSD 349
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
AL++ +EM G P+V YN L+ LC K AE LL +MR +G+
Sbjct: 350 ALRVRDEMVGCGCLPDVVTYNTLLNGLC-KERRLLDAEGLLNEMRERGV 397
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 90/233 (38%), Gaps = 36/233 (15%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI + G A ++++ N TY I++ + + A+ ++MI
Sbjct: 440 NTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMIN 499
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G LP+ II +C+ G + K+ P LI +ED+
Sbjct: 500 KGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDK--- 556
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
+H A LL+ M E P +N +I
Sbjct: 557 ---------------------------------MHDAFKLLNMMEKEKVQPDVVTYNMLI 583
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+ +S G++ A + + M ++G++PD YTY +++G+ G +EA ++ +E
Sbjct: 584 NGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDE 636
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 66/135 (48%), Gaps = 1/135 (0%)
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
N ++ Y KA + ++ M R + PDV T+ ++ G E A +++
Sbjct: 159 LNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMV 218
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+ VTY+++++G C+ +D A ++ EM D GV P+V + LI C + +
Sbjct: 219 SKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFC-RVGEI 277
Query: 496 RTAEKLLEDMRLKGL 510
A K+ ++MR +G+
Sbjct: 278 EEALKIYKEMRHRGI 292
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 82/182 (45%), Gaps = 8/182 (4%)
Query: 348 LCRMKDVHGA--KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
L RM GA + ++S ++ P P VF+ +I Y+++ A E +L+ +
Sbjct: 59 LLRMSRRRGACRREIVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVP 118
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
L++ + G A + ++S ++ T + ++ YCK EFD +
Sbjct: 119 IPAAASNALLAALSRAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAV 178
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH-----LNGITRALI 520
++EM+ V P+V +N ++ + +A D A L++ M KGL N + + L
Sbjct: 179 ISEMEKRCVFPDVVTHNVMVDAR-FRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLC 237
Query: 521 RA 522
R+
Sbjct: 238 RS 239
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 152/327 (46%), Gaps = 5/327 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
++++ CSS KE + G E V+T N L+ K G+ A ++F+
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDG-VEPDVVTY---NSLMDYLCKNGRCTEARKMFD 328
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G TY ++ + + + + M+ G P+ +I + K G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
K +A +V++ R++ + P +I LC+ V+ A+ + E +
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGR-VEDAMRYFEQMIDERLSPGNIVY 447
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+S+I SLC AK L+ +M+ G FNS+I ++ K G + + ++ LM
Sbjct: 448 NSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVR 507
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+KP++ TY+ L+ GY G+M+EA ++L + VTY+TLI GYCK+ +
Sbjct: 508 IGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMED 567
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSL 488
AL L EM+ GV P++ YN ++Q L
Sbjct: 568 ALVLFREMESSGVSPDIITYNIILQGL 594
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 164/362 (45%), Gaps = 18/362 (4%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILN--ELIALFSKLGKGKAAFEV 219
+ LLK +C +E L ++ + G G ++++ +I F K G A+
Sbjct: 166 NILLKGLCDENRSQEALELLQMMPDDG----GDCPPDVVSYTTVINGFFKEGDLDKAYGT 221
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
+++ D G + N TY I AL + + D A V M++ G +P+ I+ +C
Sbjct: 222 YHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCS 281
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
G+ KEA + P L+ LC+ + A M D + K I
Sbjct: 282 SGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTE-ARKMFDSMTKRGLKPEIT 340
Query: 340 PFSSVIRSLCR---MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ ++++ + ++HG LL M+ G P + VF+ +I AY+K G + AM +
Sbjct: 341 TYGTLLQGYATKGALVEMHG---LLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYC 454
MR +GL PD TY ++ G++E+A + RLSP + Y++LI C
Sbjct: 398 SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMID--ERLSPGNIVYNSLIHSLC 455
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG 514
+++D A +L+ EM D G+ + +N +I S C K +EKL + M G+ N
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC-KEGRVIESEKLFDLMVRIGVKPNI 514
Query: 515 IT 516
IT
Sbjct: 515 IT 516
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 143/304 (47%), Gaps = 15/304 (4%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G N + I A +++ D A V KM + G PD+ G +I CK G+ ++A
Sbjct: 369 GIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDA 428
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLC---QEDETVKLALDMLDDFSGEARKYAIKP--F 341
+ ++++ P V LI SLC + D+ +L L+MLD R + F
Sbjct: 429 MRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLD------RGICLDTIFF 482
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+S+I S C+ V ++ L M+ G P ++++I Y AG M A ++L M S
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVS 542
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+KPD TY L++GY +ME+A + E + + +TY+ +++G +
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 602
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD---WRTAEKL-LEDMRLKGLHLNGITR 517
A +L + + G Q + YN ++ LC L R + L L D++L+ N +
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 662
Query: 518 ALIR 521
AL++
Sbjct: 663 ALLK 666
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 119/273 (43%), Gaps = 3/273 (1%)
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGS--LPDSEKVGKIISW 276
V + GC+ N +Y ++ L A + + M + G PD +I+
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
F K G +A+ Y ++ + P +I++LC+ K A+++L
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDK-AMEVLTSMVKNGVMP 267
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ ++S++ C A L KM S+G P +NS++ K G T A +M
Sbjct: 268 NCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMF 327
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
M RGLKP++ TY L+ GYA G + E +L+ +N + + LI Y K
Sbjct: 328 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQ 387
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ D A+ + ++M+ G+ P+ Y +I LC
Sbjct: 388 GKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC 420
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 165/392 (42%), Gaps = 28/392 (7%)
Query: 162 DALLKAICSSVG-KKEVYALWDIVKEIGEKEKGVL-TVEILNELIALFSKLGKGKAAFEV 219
++++ A+C + K + L +VK GV+ N ++ + G+ K A
Sbjct: 238 NSIIAALCKAQAMDKAMEVLTSMVK------NGVMPNCRTYNSIVHGYCSSGQPKEAIGF 291
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
K G + TY ++ L + A + + M + G P+ G ++ +
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
G E H + L ++P V + LI + ++ + + L FS + R+ +
Sbjct: 352 KGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLV----FS-KMRQQGLN 406
Query: 340 P----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
P + +VI LC+ V A +MI E PGN V+NS+I + A E+
Sbjct: 407 PDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKEL 466
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
+ M RG+ D + ++ + G++ E+ ++ + + + + +TY TLI GYC
Sbjct: 467 ILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCL 526
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
+ D A KLL M VG++P+ YN LI C K A L +M G+ + I
Sbjct: 527 AGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC-KISRMEDALVLFREMESSGVSPDII 585
Query: 516 TRALI----------RAVKELEEDAIENGEAL 537
T +I A KEL E+G L
Sbjct: 586 TYNIILQGLFQTRRTAAAKELYVGITESGTQL 617
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 133/307 (43%), Gaps = 12/307 (3%)
Query: 215 AAFEVFNKFGDYGC---VANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVG 271
AA +N+ G N TY I + D ++ +I+ G D+
Sbjct: 71 AAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFT 130
Query: 272 KIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQED---ETVKLALDML 326
++ C + +A + L R ++ +V ++ L+ LC E+ E ++L L M+
Sbjct: 131 PLLKGLCADKRTSDAMDI-VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALEL-LQMM 188
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
D G+ + +++VI + D+ A +M+ G P +NS+I+A KA
Sbjct: 189 PDDGGDCPPDVVS-YTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKA 247
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
M AME+L M G+ P+ TY ++ GY + GQ +EA L + + VTY
Sbjct: 248 QAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTY 307
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
++L+ CK A K+ + M G++P + Y L+Q K LL+ M
Sbjct: 308 NSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA-LVEMHGLLDLMV 366
Query: 507 LKGLHLN 513
G+H N
Sbjct: 367 RNGIHPN 373
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 115/293 (39%), Gaps = 15/293 (5%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I + K G+ + A F + D Y I +L +D A + +M++ G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC---QEDETV 319
D+ II CK G+ E+ ++ L + P + LI C + DE
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEAT 534
Query: 320 KLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
KL M+ +KP ++++I C++ + A L +M S G P
Sbjct: 535 KLLASMV--------SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIIT 586
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N ++ + A E+ + G + ++ TY ++ G +EA +
Sbjct: 587 YNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 646
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+L T++ +I K+ D A L + G+ P+V Y+ + ++L
Sbjct: 647 LTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENL 699
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 102/256 (39%), Gaps = 11/256 (4%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEK--EKGV-LTVEILNELIALFSKLGKGKAA 216
V ++L+ ++C ++ WD KE+ + ++G+ L N +I K G+ +
Sbjct: 446 VYNSLIHSLC-------IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES 498
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
++F+ G N TY I+ D A + M+ G PD +I+
Sbjct: 499 EKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLING 558
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
+CK + ++A V++ + P ++ L Q T A ++ + +
Sbjct: 559 YCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA-AKELYVGITESGTQL 617
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ ++ ++ LC+ A + + FN +I A K G A ++
Sbjct: 618 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLF 677
Query: 397 KLMRSRGLKPDVYTYT 412
+ + GL PDV TY+
Sbjct: 678 AALSANGLVPDVRTYS 693
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 143/314 (45%), Gaps = 2/314 (0%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
+ K G + AF VF++ D V + TY I L + A + +K +E G +P
Sbjct: 533 YFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPV 592
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
I+ F K G A Y E + P LI+ C+ + T LAL M
Sbjct: 593 CLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNT-DLALKMR 651
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
++ + + I + ++I C+ +D+ A L S+++ G P + ++NS+IS Y
Sbjct: 652 NEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNL 711
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
+M A+ + K M G+ D+ TYT L+ G G++ A ++ +E + Y
Sbjct: 712 NNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIY 771
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
LI G C + + A K+L EM+ + PNV YN LI KA + + A +L +M
Sbjct: 772 TVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGH-FKAGNLQEAFRLHNEML 830
Query: 507 LKGLHLNGITRALI 520
KGL N T ++
Sbjct: 831 DKGLTPNDTTYDIL 844
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 160/410 (39%), Gaps = 42/410 (10%)
Query: 155 WVTS-GVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKG 213
WV S G +++ A E L D + G + + V + L+ + K K
Sbjct: 310 WVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQ----MNVVVATTLVKGYCKQDKL 365
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
+A E F+K + G N+ TY IE + A+ + +M P V +
Sbjct: 366 VSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSL 425
Query: 274 I----------------------------------SWFCKGGKAKEAHVVYTLAREKKMY 299
I SW CK GK EA ++ +K +
Sbjct: 426 IRGFLKVESREEASKLFDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLA 485
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P + +I C++ + +A + D K + +S ++ + D A
Sbjct: 486 PTKVSYNSMILGHCRQG-NLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFY 544
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
+ +M+ E P + +N I+ K G + A +MLK +G P TY +M G+
Sbjct: 545 VFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFI 604
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
G + A E ++ + +TY TLI G+CK D ALK+ NEM++ G++ ++
Sbjct: 605 KEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIA 664
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG-ITRALIRAVKELEE 528
Y LI C K D TA L ++ GL N I +LI + L
Sbjct: 665 AYGALIDGFC-KKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNN 713
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 150/354 (42%), Gaps = 7/354 (1%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA 216
T +V++L++ ++E L+D + + + T N L++ K GK A
Sbjct: 418 TVFIVNSLIRGFLKVESREEASKLFD--EAVACDIANIFTY---NSLLSWLCKEGKMSEA 472
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
++ K D G + +Y I R+ D A SV M++ G P+ ++
Sbjct: 473 TTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDG 532
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
+ K G + A V+ ++ + P I+ LC+ T + A DML F +
Sbjct: 533 YFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSE-AQDMLKKFVEKGFVP 591
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
++S++ + V A T +M G P + ++I+ + K + A++M
Sbjct: 592 VCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMR 651
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
MR++GL+ D+ Y L+ G+ +E A + +E + V Y++LI GY L
Sbjct: 652 NEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNL 711
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+ AL L M G+ ++ Y LI L LK A L +M KG+
Sbjct: 712 NNMEAALNLQKRMLGEGISCDLQTYTTLIDGL-LKEGRLVLALDLYSEMSAKGI 764
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 135/314 (42%), Gaps = 3/314 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+ I N L+ + K K A FN+ + V + F + AL + + A V E
Sbjct: 174 IRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYE 233
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
KM+ G D V ++ K +EA + A+ + + + + +I + C+
Sbjct: 234 KMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNL 293
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ V+LA +L D + + F+SVI + + ++ A L +M+S G V
Sbjct: 294 D-VELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVA 352
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
+++ Y K + A+E M G P+ TY L+ G M +A ++ + K
Sbjct: 353 TTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKN 412
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ + ++LIRG+ K+E + A KL +E + N+ YN L+ LC K
Sbjct: 413 KNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDI-ANIFTYNSLLSWLC-KEGKMS 470
Query: 497 TAEKLLEDMRLKGL 510
A L + M KGL
Sbjct: 471 EATTLWQKMLDKGL 484
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 110/255 (43%), Gaps = 3/255 (1%)
Query: 266 DSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDM 325
D+ +I FCK + A + R+K P + +I + ++ V+ AL +
Sbjct: 278 DAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVE-ALRL 336
Query: 326 LDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSK 385
D+ + + +++++ C+ + A KM GP P + +I K
Sbjct: 337 KDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCK 396
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
G+M A ++ M+++ + P V+ L+ G+ EEA ++ +EA + T
Sbjct: 397 NGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVA-CDIANIFT 455
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
Y++L+ CK + A L +M D G+ P YN +I C + + A + DM
Sbjct: 456 YNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQG-NLDMAASVFSDM 514
Query: 506 RLKGLHLNGITRALI 520
GL N IT +++
Sbjct: 515 LDCGLKPNVITYSIL 529
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 90/193 (46%), Gaps = 5/193 (2%)
Query: 325 MLDDFSGEARKYA----IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
++D F G +++ I+ ++ ++ S + ++ A ++++ P N ++
Sbjct: 157 LVDHFIGSTKRFDFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLL 216
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+A K + A E+ + M +G+ D +T +M EEA + EAK +
Sbjct: 217 TALVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVK 276
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
L Y +I+ +CK + + A LL +M+D G P+ + +I + C+K + A +
Sbjct: 277 LDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGA-CVKQGNMVEALR 335
Query: 501 LLEDMRLKGLHLN 513
L ++M G+ +N
Sbjct: 336 LKDEMVSCGVQMN 348
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 144/289 (49%), Gaps = 2/289 (0%)
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH 287
C N TY I L + D A V + M+E G PD ++ FCK ++KEA
Sbjct: 272 CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAK 331
Query: 288 VVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRS 347
+++ + P + LI +E ++ AL + D+ K + ++++I
Sbjct: 332 LIFESMPSSGLNPNRFTYTALIDGFIKEG-NIEEALRIKDEMITRGLKLNVVTYNAMIGG 390
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
+ + ++ A +L ++M+ G P +N +I Y K+ DM A E+L M++R L P
Sbjct: 391 IAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPS 450
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
+TY+ L+SG + +++A E+L++ +N + + Y TLI+ Y + ++ A++LL
Sbjct: 451 PFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLK 510
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
M GV P++ YN LI LC +A A+ LL DM KG+ N T
Sbjct: 511 IMIANGVLPDLFCYNCLIIGLC-RAKKVEEAKMLLVDMGEKGIKPNAHT 558
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 147/348 (42%), Gaps = 6/348 (1%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
L+ +C S ++ + D + G K V + LI + + + + A E+
Sbjct: 456 VLISGLCHSSDLQKANEVLDQMIRNGVKP----NVFMYGTLIKAYVQESRYEMAIELLKI 511
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + + Y I L R K + A + M E G P++ G I+ + K G+
Sbjct: 512 MIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGE 571
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+ A + + P + LI C TV+ AL + I+ +S
Sbjct: 572 IQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVE-ALSTFKCMLEKGLIPDIRAYS 630
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
++I SL + A + K + G P ++NS+IS + K GD+ A ++ M
Sbjct: 631 AIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHN 690
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G+ P++ Y L++G G++ +A E+ +E ++ VTY T+I GYCK A
Sbjct: 691 GINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEA 750
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
KL +EM G+ P+ Y LI C K + A L + + K +
Sbjct: 751 FKLFDEMISKGISPDGYIYCILIDG-CGKEGNLEKALSLFHEAQQKSV 797
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 138/330 (41%), Gaps = 9/330 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+A + +C + E + ++ E G G L+ F K + K A +F
Sbjct: 280 NAFIGGLCQTGAVDEALEVKKLMMEKGLGPDG----HTYTLLVDGFCKQKRSKEAKLIFE 335
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G N+ TY I+ + + A + ++MI G + +I K G
Sbjct: 336 SMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAG 395
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ +A ++ + P LI + + K A ++L + +ARK PF
Sbjct: 396 EMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAK-ACELLAEM--KARKLTPSPF 452
Query: 342 --SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
S +I LC D+ A +L +MI G P ++ ++I AY + A+E+LK+M
Sbjct: 453 TYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIM 512
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
+ G+ PD++ Y L+ G ++EEA +L + + + + TY I Y K E
Sbjct: 513 IANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEI 572
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A + +M G+ PN Y LI+ C
Sbjct: 573 QVAERYFKDMLSSGIVPNNVIYTILIKGHC 602
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 140/320 (43%), Gaps = 3/320 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V + N LI+ F K G + A +++++ G N Y I L + A + +
Sbjct: 661 VFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFD 720
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
++ E +PD II +CK G EA ++ K + P + LI C ++
Sbjct: 721 EIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDG-CGKE 779
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
++ AL + + + + ++ F+S+I S C+ V A+ L M+ + P +
Sbjct: 780 GNLEKALSLFHE-AQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTY 838
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
+I AY KA M A ++ M +R + P+ TYT L+ Y G + + + +
Sbjct: 839 TILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEA 898
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ Y + YCK + ALKLLN+ G++ D ++ LI LC K
Sbjct: 899 RGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLC-KEKQIS 957
Query: 497 TAEKLLEDMRLKGLHLNGIT 516
T +LL +M + L L+ T
Sbjct: 958 TVLELLSEMGKEELSLSSKT 977
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 111/232 (47%), Gaps = 3/232 (1%)
Query: 289 VYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSL 348
VY E K+ P +I + C+ + +K + +L + E + + +++ I L
Sbjct: 229 VYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKM-VLSEMEKECKP-NLFTYNAFIGGL 286
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
C+ V A + M+ +G P + ++ + K A + + M S GL P+
Sbjct: 287 CQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNR 346
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNE 468
+TYT L+ G+ G +EEA I +E +L+ VTY+ +I G K E A+ L NE
Sbjct: 347 FTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNE 406
Query: 469 MKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
M G++P+ YN LI LK+ D A +LL +M+ + L + T +++
Sbjct: 407 MLMAGLEPDTWTYNLLIDGY-LKSHDMAKACELLAEMKARKLTPSPFTYSVL 457
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 155/373 (41%), Gaps = 51/373 (13%)
Query: 147 ENLVCFFKWVTSGVV------DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEIL 200
E + F K++ +GVV ++L+ C ++ L+D + G + +
Sbjct: 644 EAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINP----NIVVY 699
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI KLG+ A E+F++ + V + TY I+ + A+ + ++MI
Sbjct: 700 NTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMIS 759
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDET 318
G PD +I K G ++A ++ A++K + S+ AF LI S C+ +
Sbjct: 760 KGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSV---GSLSAFNSLIDSFCKHGKV 816
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
++ A ++ DD + I ++ +I + + + + A+ L M + P + S
Sbjct: 817 IE-ARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTS 875
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN------ 432
++ +Y++ G+ + + K M +RG+ D Y + S Y G+ EA ++LN
Sbjct: 876 LLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEG 935
Query: 433 -----------------------------EAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
E K LS T +TL+ G+ K D A
Sbjct: 936 IKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEAS 995
Query: 464 KLLNEMKDVGVQP 476
K+L M+ +G P
Sbjct: 996 KVLGVMQRLGWVP 1008
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 101/227 (44%), Gaps = 1/227 (0%)
Query: 190 KEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
++K V ++ N LI F K GK A E+F+ D N TY I+A + ++ +
Sbjct: 793 QQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMME 852
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A + M +P++ ++ + + G + ++ + + +
Sbjct: 853 EAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMA 912
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
S+ C+E ++++ AL +L+ E K F ++I LC+ K + LLS+M E
Sbjct: 913 SAYCKEGKSLE-ALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEEL 971
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
+ N+++ + K+G+ A ++L +M+ G P + T +S
Sbjct: 972 SLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSIS 1018
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 82/231 (35%), Gaps = 54/231 (23%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP-----------------GNAVFNSVI 380
+ +S + LC +H A +L K++ PP VF+ I
Sbjct: 120 LHSYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFI 179
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKP---------------------------------- 406
+ G + A + S G P
Sbjct: 180 DKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIV 239
Query: 407 -DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
DVYTYT ++ + G + + +L+E +K + + TY+ I G C+ D AL++
Sbjct: 240 PDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQTGAVDEALEV 298
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
M + G+ P+ Y L+ C K + A+ + E M GL+ N T
Sbjct: 299 KKLMMEKGLGPDGHTYTLLVDGFC-KQKRSKEAKLIFESMPSSGLNPNRFT 348
>gi|125592120|gb|EAZ32470.1| hypothetical protein OsJ_16686 [Oryza sativa Japonica Group]
Length = 879
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 140/311 (45%), Gaps = 2/311 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
L+ L+ K+GK A + + G N +TY I F A+++ E+M+ +G
Sbjct: 423 LLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSG 482
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD +I FCK G A + ++++M P +I + +K A
Sbjct: 483 LQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGD-MKSA 541
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
LD LD + ++++I L R V A ++L KM G P + ++
Sbjct: 542 LDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRG 601
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y+ +GD+ A E ++ GLK DVY Y L+ G+M+ A + E +
Sbjct: 602 YAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRN 661
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
Y+ LI G+ + + A L+ +MK+ GV PN+ Y I + C KA D + AEK++
Sbjct: 662 TFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACC-KAGDMQRAEKVI 720
Query: 503 EDMRLKGLHLN 513
E+M GL N
Sbjct: 721 EEMVDVGLKPN 731
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 139/325 (42%), Gaps = 36/325 (11%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F L AF +F + G ++ Y IEA + D A + EKM +
Sbjct: 458 LINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKER 517
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P + II + G K A L R P LI L ++ + V+ A
Sbjct: 518 MQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHK-VQRA 576
Query: 323 LDMLDDFS------------------------GEARKYAIKP-----------FSSVIRS 347
+ +LD S G+A +Y K + +++R+
Sbjct: 577 VSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRA 636
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
C+ + A + +M + P ++N +I +++ GD+ A +++K M+ G+ P+
Sbjct: 637 CCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPN 696
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
++TYT ++ G M+ A +++ E + + TY TLI+G+ ++ D ALK
Sbjct: 697 IHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFE 756
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKA 492
EMK G++P+ Y+ L+ SL +A
Sbjct: 757 EMKLAGLKPDEASYHCLVTSLLSRA 781
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 116/262 (44%), Gaps = 1/262 (0%)
Query: 189 EKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
+KE+ + +I ++ G K+A + + GCV TY I L R+
Sbjct: 514 QKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKV 573
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
A SV +KM G P+ I+ + G +A +T +E + + L
Sbjct: 574 QRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETL 633
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
+ + C+ ++ AL + + S + ++ +I R DV A+ L+ +M +G
Sbjct: 634 LRACCKSGR-MQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDG 692
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
PP + S I+A KAGDM A ++++ M GLKP+V TYT L+ G+A + A
Sbjct: 693 VPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRAL 752
Query: 429 EILNEAKKNHSRLSPVTYHTLI 450
+ E K + +YH L+
Sbjct: 753 KCFEEMKLAGLKPDEASYHCLV 774
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 78/152 (51%)
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
+ F +I + D H A+ M + G P VF S++ AY+ A DM A+ ++
Sbjct: 243 REFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEE 302
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M+S GL+ + TY+ L+SG+A + A + EAK S L+ + Y +I +C+
Sbjct: 303 MKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGN 362
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
+ A +L+ EM++ G+ +D Y+ ++ +
Sbjct: 363 MERAEELVREMEEDGIDAPIDVYHSMMHGYTI 394
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 133/293 (45%), Gaps = 3/293 (1%)
Query: 195 LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSV 254
LT+ + LI+ F+K+ ++A +F + N Y I A + + A +
Sbjct: 310 LTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEEL 369
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF-LISSLC 313
+M E G + ++ + + VV+ +E P S++++ + +L
Sbjct: 370 VREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKP--SIISYGCLLNLY 427
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
+ V AL + + K+ K +S +I + D A + +M+ G P
Sbjct: 428 VKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDR 487
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
A++N +I A+ K G+M A+ +L+ M+ ++P + ++ GYA G M+ A + L+
Sbjct: 488 AIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDL 547
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
+++ + +TY+ LI G + + A+ +L++M G+ PN Y +++
Sbjct: 548 MRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMR 600
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 114/264 (43%), Gaps = 10/264 (3%)
Query: 252 WSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISS 311
W E P + G +I ++ K G A + R + + P AF+ +S
Sbjct: 227 WQAVVSAFERIPKPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPN----AFVFTS 282
Query: 312 LCQE---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
L ++ AL +++ E + I +S +I ++ D A L + ++
Sbjct: 283 LVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKL 342
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
+++++I A+ ++G+M A E+++ M G+ + Y +M GY Q E C
Sbjct: 343 SSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTI-IQNENKC 401
Query: 429 EILNEAKKNHS-RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
++ E K + S ++Y L+ Y K+ + AL + EM+ G++ N Y+ LI
Sbjct: 402 LVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLING 461
Query: 488 LCLKALDWRTAEKLLEDMRLKGLH 511
+ D+ A + E+M GL
Sbjct: 462 F-IHLHDFANAFAIFEEMLRSGLQ 484
>gi|90399139|emb|CAJ86163.1| H0913C04.4 [Oryza sativa Indica Group]
gi|125550286|gb|EAY96108.1| hypothetical protein OsI_17985 [Oryza sativa Indica Group]
Length = 900
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 140/311 (45%), Gaps = 2/311 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
L+ L+ K+GK A + + G N +TY I F A+++ E+M+ +G
Sbjct: 444 LLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSG 503
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD +I FCK G A + ++++M P +I + +K A
Sbjct: 504 LQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGD-MKSA 562
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
LD LD + ++++I L R V A ++L KM G P + ++
Sbjct: 563 LDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRG 622
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y+ +GD+ A E ++ GLK DVY Y L+ G+M+ A + E +
Sbjct: 623 YAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRN 682
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
Y+ LI G+ + + A L+ +MK+ GV PN+ Y I + C KA D + AEK++
Sbjct: 683 TFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACC-KAGDMQRAEKVI 741
Query: 503 EDMRLKGLHLN 513
E+M GL N
Sbjct: 742 EEMVDVGLKPN 752
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 139/325 (42%), Gaps = 36/325 (11%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F L AF +F + G ++ Y IEA + D A + EKM +
Sbjct: 479 LINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKER 538
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P + II + G K A L R P LI L ++ + V+ A
Sbjct: 539 MQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHK-VQRA 597
Query: 323 LDMLDDFS------------------------GEARKYAIKP-----------FSSVIRS 347
+ +LD S G+A +Y K + +++R+
Sbjct: 598 VSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRA 657
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
C+ + A + +M + P ++N +I +++ GD+ A +++K M+ G+ P+
Sbjct: 658 CCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPN 717
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
++TYT ++ G M+ A +++ E + + TY TLI+G+ ++ D ALK
Sbjct: 718 IHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFE 777
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKA 492
EMK G++P+ Y+ L+ SL +A
Sbjct: 778 EMKLAGLKPDEASYHCLVTSLLSRA 802
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 116/262 (44%), Gaps = 1/262 (0%)
Query: 189 EKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
+KE+ + +I ++ G K+A + + GCV TY I L R+
Sbjct: 535 QKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKV 594
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
A SV +KM G P+ I+ + G +A +T +E + + L
Sbjct: 595 QRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETL 654
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
+ + C+ ++ AL + + S + ++ +I R DV A+ L+ +M +G
Sbjct: 655 LRACCKSGR-MQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDG 713
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
PP + S I+A KAGDM A ++++ M GLKP+V TYT L+ G+A + A
Sbjct: 714 VPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRAL 773
Query: 429 EILNEAKKNHSRLSPVTYHTLI 450
+ E K + +YH L+
Sbjct: 774 KCFEEMKLAGLKPDEASYHCLV 795
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 78/152 (51%)
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
+ F +I + D H A+ M + G P VF S++ AY+ A DM A+ ++
Sbjct: 264 REFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEE 323
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M+S GL+ + TY+ L+SG+A + A + EAK S L+ + Y +I +C+
Sbjct: 324 MKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGN 383
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
+ A +L+ EM++ G+ +D Y+ ++ +
Sbjct: 384 MERAEELVCEMEEDGIDAPIDVYHSMMHGYTI 415
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 114/264 (43%), Gaps = 10/264 (3%)
Query: 252 WSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISS 311
W E P + G +I ++ K G A + R + + P AF+ +S
Sbjct: 248 WQAVVSAFERIPKPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPN----AFVFTS 303
Query: 312 LCQE---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
L ++ AL +++ E + I +S +I ++ D A L + ++
Sbjct: 304 LVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKL 363
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
+++++I A+ ++G+M A E++ M G+ + Y +M GY Q E C
Sbjct: 364 SSLNGIIYSNIIHAHCQSGNMERAEELVCEMEEDGIDAPIDVYHSMMHGYTI-IQNENKC 422
Query: 429 EILNEA-KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
++ E K+ + S ++Y L+ Y K+ + AL + EM+ G++ N Y+ LI
Sbjct: 423 LVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLING 482
Query: 488 LCLKALDWRTAEKLLEDMRLKGLH 511
+ D+ A + E+M GL
Sbjct: 483 F-IHLHDFANAFAIFEEMLRSGLQ 505
>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 808
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 159/364 (43%), Gaps = 40/364 (10%)
Query: 190 KEKGVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
K KGVL TVE LI F K G+ +A ++ + G N + + I+A + +
Sbjct: 263 KMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLV 322
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
A +M E G PD +I++ CKGG+ KEA A+E+ + P + L
Sbjct: 323 TKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPL 382
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
+ + C++ + VK A ML + K + + + I + ++ A + KM+ +G
Sbjct: 383 MHAYCKQGDYVKAA-GMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKG 441
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEML-KLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
P ++N ++S K G PAM++L M R ++PDVY + LM G+ G+++EA
Sbjct: 442 VFPDAQIYNVLMSGLCKNGRF-PAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEA 500
Query: 428 CEI-----------------------------------LNEAKKNHSRLSPVTYHTLIRG 452
+I LN+ K H TY T+I G
Sbjct: 501 IKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDG 560
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
Y K + ALK+ +M +PNV Y LI C KA D AEK+ M+ L
Sbjct: 561 YVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKA-DMIRAEKVFRGMKSFDLVP 619
Query: 513 NGIT 516
N +T
Sbjct: 620 NVVT 623
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 158/353 (44%), Gaps = 15/353 (4%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+ N +I K G+ K A E K + G + N+ +Y + A ++ + A +
Sbjct: 341 ITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLF 400
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
++ E G PD G I G+ A +V EK ++P + L+S LC+
Sbjct: 401 RIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNG 460
Query: 317 E--TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
+KL L + D + + Y F++++ R ++ A + +I +G PG
Sbjct: 461 RFPAMKLLLSEMLDRNVQPDVYV---FATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIV 517
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
+N++I + K G MT A+ L M++ PD YTY+ ++ GY M A ++ +
Sbjct: 518 GYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQM 577
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
K+ + + +TY +LI G+CK + A K+ MK + PNV Y L+ KA
Sbjct: 578 MKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGF-FKAGK 636
Query: 495 WRTAEKLLEDMRLKG-------LH--LNGITRALIRAVKELEEDAIENGEALV 538
A + E M + G H +NG+T V E+D++EN +L+
Sbjct: 637 PEKATSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLIEEKDSMENERSLI 689
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 160/369 (43%), Gaps = 12/369 (3%)
Query: 152 FFKWVTSGVVDALLKAICSS-----VGKKEVYALWDIVKEIGEKEKGVLTVEILNELIAL 206
FF W ++ L + S + V+ ++V E + + T E + LI
Sbjct: 76 FFDWASTRPFSCSLDGVAHSSLLKLLASFRVFPEIELVLENMKAQHLKPTREAFSALILA 135
Query: 207 FSKLGKGKAAFEVFNKFGD-YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET---- 261
+ + G A ++F+ + + C+ + L + D A + +KM++T
Sbjct: 136 YGESGSLDRALQLFHTVREMHNCLPTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGT 195
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
G++ D+ ++ C GK +E + K P +I C++ + ++
Sbjct: 196 GAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGD-LQC 254
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A L + + ++ + ++I C+ + LL++M + G VFN+VI
Sbjct: 255 ATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVID 314
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
A K G +T A E ++ M G PD+ TY +++ GG+++EA E L +AK+
Sbjct: 315 AEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLP 374
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+ +Y L+ YCK ++ A +L + ++G +P++ Y I + + + A +
Sbjct: 375 NKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHG-EIDVALMV 433
Query: 502 LEDMRLKGL 510
E M KG+
Sbjct: 434 REKMMEKGV 442
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 109/463 (23%), Positives = 179/463 (38%), Gaps = 42/463 (9%)
Query: 53 PAANPKDESSFSPETDF----SSRSFGENEYAQMDPSADAVESKEEEAYEIDGDKLENVL 108
P +PK SS P ++ R +++ D++ES+ E+ + D V+
Sbjct: 11 PRQHPKGSSSLPPRINYLVSDVIRILKTHQWQ------DSLESRFAESKVVVSDVAHFVI 64
Query: 109 SLLQS------------------SVDGYLESSLDSFELDLHEDFVLKVLETPLVLGENLV 150
+ S+DG SSL L L F + E LVL EN+
Sbjct: 65 DRVHDAELALKFFDWASTRPFSCSLDGVAHSSL----LKLLASFRV-FPEIELVL-ENMK 118
Query: 151 CFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKL 210
T AL+ A S L+ V+E+ + TV N L+ K
Sbjct: 119 AQHLKPTREAFSALILAYGESGSLDRALQLFHTVREM---HNCLPTVVASNSLLNGLVKS 175
Query: 211 GKGKAAFEVFNKF----GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
GK A ++++K G V + T ++ L + + + G +P
Sbjct: 176 GKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPH 235
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
II +CK G + A + K + P LI+ C+ E + +L
Sbjct: 236 VVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGE-FEAVDQLL 294
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
+ + +K F++VI + + V A + +M G P +N++I+ K
Sbjct: 295 TEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKG 354
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
G + A E L+ + RGL P+ ++YT LM Y G +A +L + + V+Y
Sbjct: 355 GRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSY 414
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
I G E D AL + +M + GV P+ YN L+ LC
Sbjct: 415 GAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLC 457
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 95/239 (39%), Gaps = 13/239 (5%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I F K GK A NK + ++ TY I+ ++ A + +M++
Sbjct: 520 NAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMK 579
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ----ED 316
P+ +I+ FCK A V+ + + P L+ + E
Sbjct: 580 HKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEK 639
Query: 317 ETVKLALDMLDDF--SGEARKYAIKPFSSVIRS--LCRMKD-VHGAKTLL----SKMISE 367
T L +++ + Y I ++ S L KD + ++L+ + M+SE
Sbjct: 640 ATSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLIEEKDSMENERSLILDFFTMMLSE 699
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
G A +NSVI K G + A +L M ++G D +T ++ G + G+ +E
Sbjct: 700 GWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLHGLCHKGKSKE 758
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 133/290 (45%), Gaps = 1/290 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N L+ +K + + +G + T I +L D+A+S K++
Sbjct: 48 FNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKIL 107
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G PD+ +I C GK EA ++ + P LI+ LC+ D V
Sbjct: 108 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK-DRQV 166
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
A ++ + + I ++S+I LC++ + TL+++M+ P N+V
Sbjct: 167 TEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTV 226
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+ A K G + A +++ +M RG++P+V TY LM G+ +++ A ++ +
Sbjct: 227 VDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDC 286
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ ++Y+TLI GYCK++ D A+ L EM + PN YN LI LC
Sbjct: 287 VANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLC 336
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 164/409 (40%), Gaps = 51/409 (12%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEK-EKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
L++ +C E L+D K IGE + V+T L + L K + E FN
Sbjct: 120 TLIRGLCVEGKIGEALHLFD--KMIGEGFQPNVVTYG------TLINGLCKDRQVTEAFN 171
Query: 222 KFGDY---GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
F + G N TY I L + + ++ +M+++ +PD + ++ C
Sbjct: 172 IFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALC 231
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
K G EAH V + + + P L+ C +E V +A+ + D + +
Sbjct: 232 KEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNE-VDVAVKVFDTMVHKDCVANV 290
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
++++I C+++ V A L +M + P +N++I G + A+ +
Sbjct: 291 ISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHE 350
Query: 399 MRSRGLKPDVYTY-----------------------------------TGLMSGYANGGQ 423
M +RG PD+ TY T ++ G G+
Sbjct: 351 MVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGE 410
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
+E+A ++ + + + TY+ +I G CK A KL +EM G PN YN
Sbjct: 411 LEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNL 470
Query: 484 LIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIE 532
+ + RT E LLE+M +G ++ T L+ V L +D ++
Sbjct: 471 ITRGFLRNNEALRTIE-LLEEMLARGFSVDVSTTTLL--VGMLSDDGLD 516
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 107/232 (46%), Gaps = 12/232 (5%)
Query: 291 TLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSV 344
T R PP S V F L++S+ + L S + + I P + V
Sbjct: 32 TFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLL-----SLSRQMDSFGIPPDVYTLAIV 86
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
I SLC + V A + L+K++ G P F ++I G + A+ + M G
Sbjct: 87 INSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGF 146
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
+P+V TY L++G Q+ EA I +E + VTY++LI G CKL E+
Sbjct: 147 QPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTT 206
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
L+NEM D + P+V N ++ +LC + + A +++ M +G+ N +T
Sbjct: 207 LMNEMVDSKIMPDVFTLNTVVDALCKEGM-VAEAHDVVDMMIHRGVEPNVVT 257
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 138/330 (41%), Gaps = 28/330 (8%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
+L+ +K+ + + +G + T I + + +A+SV K++
Sbjct: 584 FTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLL 643
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G PD G +++ CK K + P LI +LC E
Sbjct: 644 KLGFQPDVVTYGTLMNGLCK-------------MITKGISPDIFTYNSLIHALCNLCEW- 689
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
K +L++ + FS+V+ +LC+ + A ++ MI G P + ++
Sbjct: 690 KHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTAL 749
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+ + +M A+++ M +G P+V +Y L++GY +M++A +L +
Sbjct: 750 MDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGL 809
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC---------- 489
VTY+TLI G C + A+ L +EM G P++ Y L+ LC
Sbjct: 810 IADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMV 869
Query: 490 -LKALDWRTAEKLLEDMRLKGLHLNGITRA 518
LKA++ L D+ + + ++G+ RA
Sbjct: 870 LLKAIE---GSNLDADILVYNIAIDGMCRA 896
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 134/344 (38%), Gaps = 50/344 (14%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V LN LI F L + AF V K G + TY + L
Sbjct: 616 VYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLC------------- 662
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
KMI G PD +I C + K + K+ P V + ++ +LC+E
Sbjct: 663 KMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEG 722
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ +A D++D + + +++++ C ++ A + M+ +G P +
Sbjct: 723 -MIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSY 781
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK- 435
N +I+ Y + M AM +L+ M +GL D TY L+ G + G+++ A + +E
Sbjct: 782 NILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVA 841
Query: 436 ------------------KNH--------------SRLSP--VTYHTLIRGYCKLEEFDC 461
KNH S L + Y+ I G C+ E +
Sbjct: 842 SGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEA 901
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
A L + + G+QP+V YN +I LC + L A KL M
Sbjct: 902 ARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGL-LDEANKLFRKM 944
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 108/247 (43%), Gaps = 7/247 (2%)
Query: 248 FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY--PPQS-V 304
D A S +M+ P + ++++ K K + +L+R+ + PP
Sbjct: 26 LDEALSTFNRMLHKQPPPSTVDFNRLLTSI---AKTKHHSTLLSLSRQMDSFGIPPDVYT 82
Query: 305 VAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM 364
+A +I+SLC + V A L + F+++IR LC + A L KM
Sbjct: 83 LAIVINSLCHLNR-VDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKM 141
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
I EG P + ++I+ K +T A + M ++G+ P++ TY L+ G +
Sbjct: 142 IGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEW 201
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
+ ++NE + T +T++ CK A +++ M GV+PNV YN L
Sbjct: 202 KHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNAL 261
Query: 485 IQSLCLK 491
+ CL+
Sbjct: 262 MDGHCLR 268
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 111/277 (40%), Gaps = 1/277 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI L + K + N+ + + N + ++AL + + A V + MI+
Sbjct: 677 NSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIK 736
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD ++ C + EA V+ K P LI+ CQ K
Sbjct: 737 RGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDK 796
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A+ +L+ S + ++++I LC + + A L +M++ G P + ++
Sbjct: 797 -AMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILL 855
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
K + AM +LK + L D+ Y + G G++E A ++ + +
Sbjct: 856 DYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQ 915
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
TY+ +I G CK D A KL +M + + N
Sbjct: 916 PDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSN 952
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 130/327 (39%), Gaps = 40/327 (12%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
++I ++ + G+ + A ++F+ G N TY I L ++ + A +
Sbjct: 395 IQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFS 454
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE- 315
+M + G P+ I F + +A + + S L+ L +
Sbjct: 455 EMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 514
Query: 316 -DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLC----------------RMKDVHGAK 358
D++VK +L S +R P + +RSL + A
Sbjct: 515 LDQSVK---QILCKPSSSSR-----PSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDAL 566
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+ ++M+ PPP F ++++ +K + + + M S G+ PDVYT L++ +
Sbjct: 567 SSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSF 626
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
+ ++ A +L + K + VTY TL+ G CK M G+ P++
Sbjct: 627 CHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK-------------MITKGISPDI 673
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDM 505
YN LI +LC +W+ LL +M
Sbjct: 674 FTYNSLIHALC-NLCEWKHVTTLLNEM 699
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 80/202 (39%), Gaps = 5/202 (2%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+ C E ++D + G V V N LI + ++ + A + +
Sbjct: 748 ALMDGHCLRSEMDEAVKVFDTMVHKG----CVPNVRSYNILINGYCQIQRMDKAMGLLEQ 803
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G +A+ TY I L A ++ +M+ +G +PD ++ + CK
Sbjct: 804 MSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHH 863
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
EA V+ + V I +C+ E ++ A D+ + S + + ++ ++
Sbjct: 864 LAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGE-LEAARDLFSNLSSKGLQPDVRTYN 922
Query: 343 SVIRSLCRMKDVHGAKTLLSKM 364
+I LC+ + A L KM
Sbjct: 923 IMIHGLCKRGLLDEANKLFRKM 944
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 144/289 (49%), Gaps = 2/289 (0%)
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH 287
C N TY I L + D A V + M+E G PD ++ FCK ++KEA
Sbjct: 272 CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAK 331
Query: 288 VVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRS 347
+++ + P + LI +E ++ AL + D+ K + ++++I
Sbjct: 332 LIFESMPSSGLNPNRFTYTALIDGFIKEG-NIEEALRIKDEMITRGLKLNVVTYNAMIGG 390
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
+ + ++ A +L ++M+ G P +N +I Y K+ DM A E+L M++R L P
Sbjct: 391 IAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPS 450
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
+TY+ L+SG + +++A E+L++ +N + + Y TLI+ Y + ++ A++LL
Sbjct: 451 PFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLK 510
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
M GV P++ YN LI LC +A A+ LL DM KG+ N T
Sbjct: 511 IMIANGVLPDLFCYNCLIIGLC-RAKKVEEAKMLLVDMGEKGIKPNAHT 558
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 145/329 (44%), Gaps = 6/329 (1%)
Query: 191 EKGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
EKG++ + + +I SK GK K A VF KF G V + Y I + +
Sbjct: 619 EKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIE 678
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIIS--WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF 307
A + ++M+ G P+ +I+ +CK G EA ++ K + P +
Sbjct: 679 KASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCI 738
Query: 308 LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
LI C ++ ++ AL + + + + ++ F+S+I S C+ V A+ L M+ +
Sbjct: 739 LIDG-CGKEGNLEKALSLFHE-AQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDK 796
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
P + +I AY KA M A ++ M +R + P+ TYT L+ Y G +
Sbjct: 797 KLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKM 856
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
+ + + + Y + YCK + ALKLLN+ G++ D ++ LI
Sbjct: 857 ISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFH 916
Query: 488 LCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
LC K T +LL +M + L L+ T
Sbjct: 917 LC-KEKQISTVLELLSEMGKEELSLSSKT 944
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 124/283 (43%), Gaps = 4/283 (1%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
TY I L A V ++MI G P+ G +I + + + + A + +
Sbjct: 453 TYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIM 512
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
+ P LI LC+ + V+ A +L D + K + + I + +
Sbjct: 513 IANGVLPDLFCYNCLIIGLCRAKK-VEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGE 571
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
+ A+ M+S G P N ++ +I + G+ A+ K M +GL PD+ Y+
Sbjct: 572 IQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSA 631
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
++ + G+ +EA + + K Y++LI G+CK + + A +L +EM G
Sbjct: 632 IIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNG 691
Query: 474 VQPNVDEYNKLIQ--SLCLKALDWRTAEKLLEDMRLKGLHLNG 514
+ PN+ YN LI C K+ + A KL ++M KG+ +G
Sbjct: 692 INPNIVVYNTLINDYGYC-KSGNLTEAFKLFDEMISKGISPDG 733
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 138/330 (41%), Gaps = 9/330 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+A + +C + E + ++ E G G L+ F K + K A +F
Sbjct: 280 NAFIGGLCQTGAVDEALEVKKLMMEKGLGPDG----HTYTLLVDGFCKQKRSKEAKLIFE 335
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G N+ TY I+ + + A + ++MI G + +I K G
Sbjct: 336 SMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAG 395
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ +A ++ + P LI + + K A ++L + +ARK PF
Sbjct: 396 EMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAK-ACELLAEM--KARKLTPSPF 452
Query: 342 --SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
S +I LC D+ A +L +MI G P ++ ++I AY + A+E+LK+M
Sbjct: 453 TYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIM 512
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
+ G+ PD++ Y L+ G ++EEA +L + + + + TY I Y K E
Sbjct: 513 IANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEI 572
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A + +M G+ PN Y LI+ C
Sbjct: 573 QVAERYFKDMLSSGIVPNNVIYTILIKGHC 602
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 111/232 (47%), Gaps = 3/232 (1%)
Query: 289 VYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSL 348
VY E K+ P +I + C+ + +K + +L + E + + +++ I L
Sbjct: 229 VYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKM-VLSEMEKECKP-NLFTYNAFIGGL 286
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
C+ V A + M+ +G P + ++ + K A + + M S GL P+
Sbjct: 287 CQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNR 346
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNE 468
+TYT L+ G+ G +EEA I +E +L+ VTY+ +I G K E A+ L NE
Sbjct: 347 FTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNE 406
Query: 469 MKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
M G++P+ YN LI LK+ D A +LL +M+ + L + T +++
Sbjct: 407 MLMAGIEPDTWTYNLLIDGY-LKSHDMAKACELLAEMKARKLTPSPFTYSVL 457
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 101/227 (44%), Gaps = 1/227 (0%)
Query: 190 KEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
++K V ++ N LI F K GK A E+F+ D N TY I+A + ++ +
Sbjct: 760 QQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMME 819
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A + M +P++ ++ + + G + ++ + + +
Sbjct: 820 EAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMA 879
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
S+ C+E ++++ AL +L+ E K F ++I LC+ K + LLS+M E
Sbjct: 880 SAYCKEGKSLE-ALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEEL 938
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
+ N+++ + K+G+ A ++L +M+ G P + T +S
Sbjct: 939 SLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSIS 985
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 82/231 (35%), Gaps = 54/231 (23%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP-----------------GNAVFNSVI 380
+ +S + LC +H A +L K++ PP VF+ I
Sbjct: 120 LHSYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFI 179
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKP---------------------------------- 406
+ G + A + S G P
Sbjct: 180 DKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIV 239
Query: 407 -DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
DVYTYT ++ + G + + +L+E +K + + TY+ I G C+ D AL++
Sbjct: 240 PDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQTGAVDEALEV 298
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
M + G+ P+ Y L+ C K + A+ + E M GL+ N T
Sbjct: 299 KKLMMEKGLGPDGHTYTLLVDGFC-KQKRSKEAKLIFESMPSSGLNPNRFT 348
>gi|32488707|emb|CAE03450.1| OSJNBa0088H09.8 [Oryza sativa Japonica Group]
Length = 905
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 140/311 (45%), Gaps = 2/311 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
L+ L+ K+GK A + + G N +TY I F A+++ E+M+ +G
Sbjct: 449 LLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSG 508
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD +I FCK G A + ++++M P +I + +K A
Sbjct: 509 LQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGD-MKSA 567
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
LD LD + ++++I L R V A ++L KM G P + ++
Sbjct: 568 LDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRG 627
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y+ +GD+ A E ++ GLK DVY Y L+ G+M+ A + E +
Sbjct: 628 YAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRN 687
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
Y+ LI G+ + + A L+ +MK+ GV PN+ Y I + C KA D + AEK++
Sbjct: 688 TFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINA-CCKAGDMQRAEKVI 746
Query: 503 EDMRLKGLHLN 513
E+M GL N
Sbjct: 747 EEMVDVGLKPN 757
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 139/325 (42%), Gaps = 36/325 (11%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F L AF +F + G ++ Y IEA + D A + EKM +
Sbjct: 484 LINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKER 543
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P + II + G K A L R P LI L ++ + V+ A
Sbjct: 544 MQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHK-VQRA 602
Query: 323 LDMLDDFS------------------------GEARKYAIKP-----------FSSVIRS 347
+ +LD S G+A +Y K + +++R+
Sbjct: 603 VSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRA 662
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
C+ + A + +M + P ++N +I +++ GD+ A +++K M+ G+ P+
Sbjct: 663 CCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPN 722
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
++TYT ++ G M+ A +++ E + + TY TLI+G+ ++ D ALK
Sbjct: 723 IHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFE 782
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKA 492
EMK G++P+ Y+ L+ SL +A
Sbjct: 783 EMKLAGLKPDEASYHCLVTSLLSRA 807
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 116/262 (44%), Gaps = 1/262 (0%)
Query: 189 EKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
+KE+ + +I ++ G K+A + + GCV TY I L R+
Sbjct: 540 QKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKV 599
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
A SV +KM G P+ I+ + G +A +T +E + + L
Sbjct: 600 QRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETL 659
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
+ + C+ ++ AL + + S + ++ +I R DV A+ L+ +M +G
Sbjct: 660 LRACCKSGR-MQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDG 718
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
PP + S I+A KAGDM A ++++ M GLKP+V TYT L+ G+A + A
Sbjct: 719 VPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRAL 778
Query: 429 EILNEAKKNHSRLSPVTYHTLI 450
+ E K + +YH L+
Sbjct: 779 KCFEEMKLAGLKPDEASYHCLV 800
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 106/234 (45%), Gaps = 13/234 (5%)
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKL 321
P + G +I ++ K G A + R + + P AF+ +SL ++
Sbjct: 295 PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPN----AFVFTSLVHAYAVARDMRG 350
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHG------AKTLLSKMISEGPPPGNAV 375
AL +++ E + I +S +I ++ D H A+ L+ +M +G V
Sbjct: 351 ALSCVEEMKSEGLELTIVTYSILISGFAKINDSHQSGNMERAEELVREMEEDGIDAPIDV 410
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
++S++ Y+ + + + + ++ G KP + +Y L++ Y G++ +A I E +
Sbjct: 411 YHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEME 470
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + TY LI G+ L +F A + EM G+QP+ YN LI++ C
Sbjct: 471 SCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFC 524
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 93/189 (49%), Gaps = 2/189 (1%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
K+ K +S +I + D A + +M+ G P A++N +I A+ K G+M A+
Sbjct: 475 KHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAIC 534
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+L+ M+ ++P + ++ GYA G M+ A + L+ +++ + +TY+ LI G
Sbjct: 535 ILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLV 594
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN- 513
+ + A+ +L++M G+ PN Y +++ D A + ++ GL L+
Sbjct: 595 RKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASG-DIGKAFEYFTKIKESGLKLDV 653
Query: 514 GITRALIRA 522
I L+RA
Sbjct: 654 YIYETLLRA 662
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 1/186 (0%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
K +I + ++ ++ V A ++ +M S G N ++ +I+ + D A
Sbjct: 440 KPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFA 499
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+ + M GL+PD Y L+ + G M+ A IL + +K + S + +I GY
Sbjct: 500 IFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYA 559
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG 514
+ AL L+ M+ G P V YN LI L K R A +L+ M + G+ N
Sbjct: 560 VAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQR-AVSVLDKMSIAGITPNE 618
Query: 515 ITRALI 520
T +I
Sbjct: 619 HTYTII 624
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 141/308 (45%), Gaps = 2/308 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI LF++ GK A + +G V + Y I R + A V ++M+ G
Sbjct: 241 LIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCG 300
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
LPD +++ CK + +A + RE+ + P LI C E + K A
Sbjct: 301 CLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDK-A 359
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
L + D + + I ++++I +CR D+ A L M S P + ++ +I +
Sbjct: 360 LQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDS 419
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ + G + A L M ++G+ P++ TY ++ GY G + + + L + N
Sbjct: 420 HCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPD 479
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
+TY+TLI GY K ++ A KLLN M+ VQP+V YN LI + + + A +
Sbjct: 480 LITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHG-NVQEAGWIF 538
Query: 503 EDMRLKGL 510
E M KG+
Sbjct: 539 EKMCAKGI 546
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 155/336 (46%), Gaps = 12/336 (3%)
Query: 187 IGEKEKGVLTVEIL--NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSR 244
I E EK + +++ N ++ + G +AA + + G TY ++ L R
Sbjct: 118 ISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCR 177
Query: 245 RKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSV 304
++D AW V ++M + G PD +I FC+ G+ +EA +Y R + + P
Sbjct: 178 SGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVS 237
Query: 305 VAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTL 360
+ LI + + +D + E R + + P ++ VI CR + A +
Sbjct: 238 FSCLIGLFARRGK-----MDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRV 292
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
+M+ G P +N++++ K + A +L MR RG+ PD+ T+T L+ GY
Sbjct: 293 RDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCI 352
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
G++++A ++ + R VTY+TLI G C+ + D A L ++M + PN
Sbjct: 353 EGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVT 412
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
Y+ LI S C K A L++M KG+ N +T
Sbjct: 413 YSILIDSHCEKG-QVEDAFGFLDEMINKGILPNIMT 447
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 40/229 (17%)
Query: 321 LALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
L D +D E K + P + ++ + R D A L+ M+S+G PG +
Sbjct: 109 LEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTY 168
Query: 377 NSV-----------------------------------ISAYSKAGDMTPAMEMLKLMRS 401
NSV I + + G++ A+++ K MR
Sbjct: 169 NSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRH 228
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
RG+KPD+ +++ L+ +A G+M+ A L E + V Y +I G+C+
Sbjct: 229 RGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSD 288
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
AL++ +EM G P+V YN L+ LC K AE LL +MR +G+
Sbjct: 289 ALRVRDEMVGCGCLPDVVTYNTLLNGLC-KERRLLDAEGLLNEMRERGV 336
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 90/233 (38%), Gaps = 36/233 (15%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI + G A ++++ N TY I++ + + A+ ++MI
Sbjct: 379 NTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMIN 438
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G LP+ II +C+ G + K+ P LI +ED+
Sbjct: 439 KGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDK--- 495
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
+H A LL+ M E P +N +I
Sbjct: 496 ---------------------------------MHDAFKLLNMMEKEKVQPDVVTYNMLI 522
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+ +S G++ A + + M ++G++PD YTY +++G+ G +EA ++ +E
Sbjct: 523 NGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDE 575
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 66/135 (48%), Gaps = 1/135 (0%)
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
N ++ Y KA + ++ M R + PDV T+ ++ G E A +++
Sbjct: 98 LNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMV 157
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+ VTY+++++G C+ +D A ++ EM D GV P+V + LI C + +
Sbjct: 158 SKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFC-RVGEI 216
Query: 496 RTAEKLLEDMRLKGL 510
A K+ ++MR +G+
Sbjct: 217 EEALKIYKEMRHRGI 231
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 80/182 (43%), Gaps = 13/182 (7%)
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
R CR + ++S ++ P P VF+ +I Y+++ A E +L+ +
Sbjct: 5 RGACR-------REIVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVP 57
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
L++ + G A + ++S ++ T + ++ YCK EFD +
Sbjct: 58 IPAAASNALLAALSRAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAV 117
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH-----LNGITRALI 520
++EM+ V P+V +N ++ + +A D A L++ M KGL N + + L
Sbjct: 118 ISEMEKRCVFPDVVTHNVMVDAR-FRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLC 176
Query: 521 RA 522
R+
Sbjct: 177 RS 178
>gi|115461420|ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group]
gi|113565881|dbj|BAF16224.1| Os04g0684500 [Oryza sativa Japonica Group]
Length = 901
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 140/311 (45%), Gaps = 2/311 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
L+ L+ K+GK A + + G N +TY I F A+++ E+M+ +G
Sbjct: 445 LLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSG 504
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD +I FCK G A + ++++M P +I + +K A
Sbjct: 505 LQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGD-MKSA 563
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
LD LD + ++++I L R V A ++L KM G P + ++
Sbjct: 564 LDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRG 623
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y+ +GD+ A E ++ GLK DVY Y L+ G+M+ A + E +
Sbjct: 624 YAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRN 683
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
Y+ LI G+ + + A L+ +MK+ GV PN+ Y I + C KA D + AEK++
Sbjct: 684 TFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACC-KAGDMQRAEKVI 742
Query: 503 EDMRLKGLHLN 513
E+M GL N
Sbjct: 743 EEMVDVGLKPN 753
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 139/325 (42%), Gaps = 36/325 (11%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F L AF +F + G ++ Y IEA + D A + EKM +
Sbjct: 480 LINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKER 539
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P + II + G K A L R P LI L ++ + V+ A
Sbjct: 540 MQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHK-VQRA 598
Query: 323 LDMLDDFS------------------------GEARKYAIKP-----------FSSVIRS 347
+ +LD S G+A +Y K + +++R+
Sbjct: 599 VSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRA 658
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
C+ + A + +M + P ++N +I +++ GD+ A +++K M+ G+ P+
Sbjct: 659 CCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPN 718
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
++TYT ++ G M+ A +++ E + + TY TLI+G+ ++ D ALK
Sbjct: 719 IHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFE 778
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKA 492
EMK G++P+ Y+ L+ SL +A
Sbjct: 779 EMKLAGLKPDEASYHCLVTSLLSRA 803
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 116/262 (44%), Gaps = 1/262 (0%)
Query: 189 EKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
+KE+ + +I ++ G K+A + + GCV TY I L R+
Sbjct: 536 QKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKV 595
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
A SV +KM G P+ I+ + G +A +T +E + + L
Sbjct: 596 QRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETL 655
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
+ + C+ ++ AL + + S + ++ +I R DV A+ L+ +M +G
Sbjct: 656 LRACCKSGR-MQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDG 714
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
PP + S I+A KAGDM A ++++ M GLKP+V TYT L+ G+A + A
Sbjct: 715 VPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRAL 774
Query: 429 EILNEAKKNHSRLSPVTYHTLI 450
+ E K + +YH L+
Sbjct: 775 KCFEEMKLAGLKPDEASYHCLV 796
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 78/152 (51%)
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
+ F +I + D H A+ M + G P VF S++ AY+ A DM A+ ++
Sbjct: 265 REFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEE 324
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M+S GL+ + TY+ L+SG+A + A + EAK S L+ + Y +I +C+
Sbjct: 325 MKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGN 384
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
+ A +L+ EM++ G+ +D Y+ ++ +
Sbjct: 385 MERAEELVREMEEDGIDAPIDVYHSMMHGYTI 416
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 133/293 (45%), Gaps = 3/293 (1%)
Query: 195 LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSV 254
LT+ + LI+ F+K+ ++A +F + N Y I A + + A +
Sbjct: 332 LTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEEL 391
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF-LISSLC 313
+M E G + ++ + + VV+ +E P S++++ + +L
Sbjct: 392 VREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKP--SIISYGCLLNLY 449
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
+ V AL + + K+ K +S +I + D A + +M+ G P
Sbjct: 450 VKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDR 509
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
A++N +I A+ K G+M A+ +L+ M+ ++P + ++ GYA G M+ A + L+
Sbjct: 510 AIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDL 569
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
+++ + +TY+ LI G + + A+ +L++M G+ PN Y +++
Sbjct: 570 MRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMR 622
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 114/264 (43%), Gaps = 10/264 (3%)
Query: 252 WSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISS 311
W E P + G +I ++ K G A + R + + P AF+ +S
Sbjct: 249 WQAVVSAFERIPKPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPN----AFVFTS 304
Query: 312 LCQE---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
L ++ AL +++ E + I +S +I ++ D A L + ++
Sbjct: 305 LVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKL 364
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
+++++I A+ ++G+M A E+++ M G+ + Y +M GY Q E C
Sbjct: 365 SSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTI-IQNENKC 423
Query: 429 EILNEAKKNHS-RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
++ E K + S ++Y L+ Y K+ + AL + EM+ G++ N Y+ LI
Sbjct: 424 LVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLING 483
Query: 488 LCLKALDWRTAEKLLEDMRLKGLH 511
+ D+ A + E+M GL
Sbjct: 484 F-IHLHDFANAFAIFEEMLRSGLQ 506
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 188/429 (43%), Gaps = 60/429 (13%)
Query: 116 DGYLESSLDSFELDLHEDFVLKVLETPLVLGENLVCFFKWVTSGVVDALLKAICSSVGKK 175
+GY E++ E F+ K+L+ +L S +V +LL C + +
Sbjct: 208 NGYTEAA---------EMFMCKILKVGFLL-----------DSHIVTSLLLGFCRGLNLR 247
Query: 176 EVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETY 235
+ ++D++ G ++ IL I ++G+ + AF + ++ G+ GC + TY
Sbjct: 248 DALKVFDLMSREGTCAPNSVSYSIL---IHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTY 304
Query: 236 YFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE 295
I+AL R + D A+++ ++MI G P+ +I C+ GK +EA+ V +
Sbjct: 305 TVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVK 364
Query: 296 KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVH 355
++P LI+ C++ V A ++L A K ++ F+ ++ LCR+ +
Sbjct: 365 DGIFPSVITYNALINGYCKDGRVVP-AFELLTVMEKRACKPNVRTFNELMEGLCRVGKPY 423
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
A LL +M+ G P +N +I + G M A ++L M S L+PD T+T ++
Sbjct: 424 KAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAII 483
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK----------LEEF------ 459
+ + G+ + A L + L VT TLI G C LE
Sbjct: 484 NAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRML 543
Query: 460 ---------------DCALK----LLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
C LK +L ++ +G+ P+V Y L+ L +++ D + +
Sbjct: 544 TTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGL-IRSGDISGSFR 602
Query: 501 LLEDMRLKG 509
+LE M+L G
Sbjct: 603 MLELMKLSG 611
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 168/398 (42%), Gaps = 42/398 (10%)
Query: 156 VTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKA 215
V V+ AL++ CS +KE+ L E+ E L + L+ +KL G
Sbjct: 121 VAHDVIVALIRE-CSRC-EKEMLKLISCFDELREVSGFRLNYPCYSSLLMSLAKLDLGFL 178
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A+ + + G V Y + AL + + A K+++ G L DS V ++
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLL 238
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSV-VAFLISSLCQ----------EDET------ 318
FC+G ++A V+ L + P SV + LI LC+ +D+
Sbjct: 239 GFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQ 298
Query: 319 ------------------VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTL 360
+ A ++ D+ K + ++ +I LCR + A +
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGV 358
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
KM+ +G P +N++I+ Y K G + PA E+L +M R KP+V T+ LM G
Sbjct: 359 CRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418
Query: 421 GGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G+ +A +L N LSP V+Y+ LI G C+ + A KLL M ++P+
Sbjct: 419 VGKPYKAVHLLKRMLDNG--LSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDC 476
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ +I + C K A L M KG+ L+ +T
Sbjct: 477 LTFTAIINAFC-KQGKADVASAFLGLMLRKGISLDEVT 513
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 136/306 (44%), Gaps = 5/306 (1%)
Query: 187 IGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRK 246
+ EK V NEL+ ++GK A + + D G + +Y I+ L R
Sbjct: 396 VMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREG 455
Query: 247 IFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVA 306
+ A+ + M PD II+ FCK GKA A L K + +
Sbjct: 456 HMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGT 515
Query: 307 FLISSLCQEDET--VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM 364
LI +C +T L+ L +++ ++ C++K+ +L K+
Sbjct: 516 TLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKE---ELAMLGKI 572
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
G P + +++ ++GD++ + ML+LM+ G P+VY YT +++G G++
Sbjct: 573 NKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRV 632
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
EEA ++L+ + + + VTY +++GY + D AL+ + M + G + N Y+ L
Sbjct: 633 EEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSL 692
Query: 485 IQSLCL 490
++ L
Sbjct: 693 LRGFVL 698
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 145/303 (47%), Gaps = 4/303 (1%)
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
+F K G N + I + + +A+SV K+++ G PD+ + I
Sbjct: 88 TVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFI 147
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR 334
FC G+ +A + + Q LI+ LC+ ET + AL++L G+
Sbjct: 148 KGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGET-RAALELLRRVDGKLV 206
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
+ + +S++I S+C+ K+V+ A L S+M+S ++++IS + G + A+
Sbjct: 207 QLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIG 266
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+ M S + PDVYT+ L+ + G+++EA L K + VTY++L+ GYC
Sbjct: 267 LFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYC 326
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC-LKALDWRTAEKLLEDMRLKGLHLN 513
+ E + A +LN M GV V YN +I C +K +D A KL ++M K + N
Sbjct: 327 LVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVD--QAMKLFKEMHHKQIFPN 384
Query: 514 GIT 516
IT
Sbjct: 385 VIT 387
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 146/321 (45%), Gaps = 2/321 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N LI F +LG AF V K G + T I+ + A + +K++
Sbjct: 108 FNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLV 167
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
G D G +I+ CK G+ + A + K + + + +I S+C+ D+ V
Sbjct: 168 ALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCK-DKNV 226
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
A D+ + I +S++I C + + A L +KM SE P FN +
Sbjct: 227 NDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNIL 286
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+ A+ K G + A L +M +G+KPD+ TY LM GY ++ A ILN
Sbjct: 287 VDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGV 346
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
+ +Y+ +I G+CK++ D A+KL EM + PNV YN LI LC K+ A
Sbjct: 347 TATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLC-KSGRISYAL 405
Query: 500 KLLEDMRLKGLHLNGITRALI 520
+L++ M +G + IT + I
Sbjct: 406 ELIDLMHDRGQQPDIITYSSI 426
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 143/330 (43%), Gaps = 37/330 (11%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
AF+++++ +N TY I A + KM PD ++
Sbjct: 229 AFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVD 288
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
FCK G+ KEA + ++ + P L+ C +E V +A +L+ S
Sbjct: 289 AFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNE-VNMAKSILNTMSHRGVT 347
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
++ ++ VI C++K V A L +M + P +NS+I K+G ++ A+E+
Sbjct: 348 ATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALEL 407
Query: 396 LKLMRSRG-----------------------------------LKPDVYTYTGLMSGYAN 420
+ LM RG ++P++YTYT L+ G
Sbjct: 408 IDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCK 467
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
GG++E+A I + L+ TY +I+G+C FD AL LL++MKD P+
Sbjct: 468 GGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAIT 527
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
Y +I SL K + + AEKLL +M +GL
Sbjct: 528 YEIIICSLFDKDENDK-AEKLLREMITRGL 556
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 10/210 (4%)
Query: 289 VYTLAREKKMYP---PQSVVAFLISSLCQEDETVKLALDMLDD---FSGEARKYAIKP-- 340
V+ ++ KK +P P++ + I S T D++D F+ R+ P
Sbjct: 13 VFRVSVPKKFHPFQFPENTHFYFIHSF-STSTTFHNNNDVVDAVSLFNCLLRQNPTPPDM 71
Query: 341 -FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
F ++ SL + K H +L KM G P FN +I+ + + G + A +L +
Sbjct: 72 EFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKI 131
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
G +PD T + G+ GQ+ +A ++ L V+Y TLI G CK+ E
Sbjct: 132 LKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGET 191
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
AL+LL + VQ +V Y+ +I S+C
Sbjct: 192 RAALELLRRVDGKLVQLDVVMYSTIIDSMC 221
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 85/192 (44%), Gaps = 2/192 (1%)
Query: 329 FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD 388
F Y I FS+ + DV A +L + ++ + P P + F ++ + K+
Sbjct: 27 FPENTHFYFIHSFSTS-TTFHNNNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKH 85
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHT 448
+ + + M RG+KP+ + L++ + G + A +L + K +T +T
Sbjct: 86 YHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNT 145
Query: 449 LIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLK 508
I+G+C + AL +++ +G + Y LI LC K + R A +LL + K
Sbjct: 146 FIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLC-KVGETRAALELLRRVDGK 204
Query: 509 GLHLNGITRALI 520
+ L+ + + I
Sbjct: 205 LVQLDVVMYSTI 216
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 153/314 (48%), Gaps = 2/314 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K+G+ +AA +V + N Y I+ L + K+ A+ + +MI
Sbjct: 164 LINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKR 223
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P +I FC GK K+A ++ K + P L+ +LC+E + +K A
Sbjct: 224 IPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGK-IKEA 282
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+++ E + + +++++ C + +V AK +LS + P + +N +I+
Sbjct: 283 KNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMING 342
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ K + A+ + M RG+ P TY L+ G G++ A E+++E N
Sbjct: 343 FCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPAD 402
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
VTY++LI +CK + D A+ L+ ++K+ G+QPN+ YN LI LC K + A+ +
Sbjct: 403 IVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLC-KGGQLKNAQDVF 461
Query: 503 EDMRLKGLHLNGIT 516
+D+ +KG ++N T
Sbjct: 462 QDLLIKGYNVNAWT 475
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 168/361 (46%), Gaps = 12/361 (3%)
Query: 154 KWVTSGVV--DALLKAICSSVGKKEVYALWD--IVKEIGEKEKGVLTVEILNELIALFSK 209
K V + VV ++ +C + Y L+ IVK I TV + LI F
Sbjct: 187 KLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPP------TVVTFSSLIYGFCI 240
Query: 210 LGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEK 269
+GK K AF +FN+ + T+ ++AL + A +V M++ G P
Sbjct: 241 VGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVT 300
Query: 270 VGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDF 329
++ +C + +A V ++ ++ P +I+ C+ + V AL + +
Sbjct: 301 YNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCK-IKMVDEALCLFHEM 359
Query: 330 SGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
++S+I LC+ + A L+ +M + P +NS+I + K +
Sbjct: 360 CCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHV 419
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
A+ ++K ++ G++P++ TY L+ G GGQ++ A ++ + ++ TY+ +
Sbjct: 420 DKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIM 479
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
I G CK FD A LL++M+D G+ P+ Y +IQ+L K + + A+KLL +M +KG
Sbjct: 480 INGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEK-AQKLLREMVIKG 538
Query: 510 L 510
+
Sbjct: 539 V 539
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 122/268 (45%), Gaps = 18/268 (6%)
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
+A+SV K+++ G C GK EA + + + LI
Sbjct: 120 FAFSVFAKILKMG--------------LCLNGKVNEALLFHDHVLALGFHLNHVTYGILI 165
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
+ LC+ +T + AL +L G+ + +S++I LC+ K V A L S+MI +
Sbjct: 166 NGLCKMGQT-RAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRI 224
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
PP F+S+I + G A + M + + PD YT+ L+ G+++EA
Sbjct: 225 PPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKN 284
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
++ K + VTY+TL+ GYC + E A +L+ + + V PN YN +I C
Sbjct: 285 VIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFC 344
Query: 490 -LKALDWRTAEKLLEDMRLKGLHLNGIT 516
+K +D A L +M +G+ + +T
Sbjct: 345 KIKMVD--EALCLFHEMCCRGIAPHKVT 370
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 159/383 (41%), Gaps = 32/383 (8%)
Query: 98 EIDGDKLENVLSLLQSSVDGYLESSLDSFELDLHEDFVLKVLETPLVLGENLVCFFKWVT 157
+I+G + + + + +DG + L + L+ + ++K + +V
Sbjct: 183 QIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVV------------- 229
Query: 158 SGVVDALLKAICSSVGK-KEVYALWD--IVKEIGEKEKGVLTVEILNELIALFSKLGKGK 214
+L+ C VGK K+ + L++ ++K I T IL + + K+ + K
Sbjct: 230 --TFSSLIYGFC-IVGKFKDAFRLFNEMVMKNINPD---AYTFNILVDALCKEGKIKEAK 283
Query: 215 AAFEVFNKFGDYGCVANQETY---YFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVG 271
V K G V T Y + + + K S+ +M P+S
Sbjct: 284 NVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAK---HVLSIISRM---RVAPNSRSYN 337
Query: 272 KIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSG 331
+I+ FCK EA ++ + + P + LI LC+ + A +++D+
Sbjct: 338 IMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGR-IPYAWELVDEMHN 396
Query: 332 EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
I ++S+I C+ + V A L+ K+ G P +N +I K G +
Sbjct: 397 NCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKN 456
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
A ++ + + +G + +TY +++G G +EA +L++ + N VTY T+I+
Sbjct: 457 AQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQ 516
Query: 452 GYCKLEEFDCALKLLNEMKDVGV 474
+E + A KLL EM GV
Sbjct: 517 ALFHKDENEKAQKLLREMVIKGV 539
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 22/141 (15%)
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKL-MRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
P FN +++ K + P + L M S+G+KPD++T + L++ Y + GQM A
Sbjct: 64 PSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYCHLGQMTFAFS 123
Query: 430 I--------------LNEAKKNHS-------RLSPVTYHTLIRGYCKLEEFDCALKLLNE 468
+ +NEA H L+ VTY LI G CK+ + AL++L +
Sbjct: 124 VFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQ 183
Query: 469 MKDVGVQPNVDEYNKLIQSLC 489
++ V NV Y+ +I LC
Sbjct: 184 IEGKLVNTNVVMYSTIIDGLC 204
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 139/299 (46%), Gaps = 8/299 (2%)
Query: 226 YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKE 285
+GCV N Y I+ALS+R D A + E+M G PD +I FC+ + E
Sbjct: 239 HGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLE 298
Query: 286 AHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVI 345
+ K P +L+ LC+ + A +L G + F++++
Sbjct: 299 GAKLVDRMILKGFTPNDMTYGYLMHGLCKTCR-IDEAQALLSKVPGP----NVVHFNTLV 353
Query: 346 RSLCRMKDVHGAKTLL-SKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
R ++ A + KMI+ G P F+++++ K G A+E++ M ++G
Sbjct: 354 NGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGC 413
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
KP++ TYT L+ G+ GQ+EEA IL E L+ V Y+ LI CK + AL
Sbjct: 414 KPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALD 473
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRA 522
+ EM G +P++ +N LI LC + + A L DM L+G+ N +T LI A
Sbjct: 474 MFGEMSSKGCKPDIFTFNSLIFGLC-RVDEMEDALALYRDMVLEGVIANSVTFNTLIHA 531
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 151/318 (47%), Gaps = 3/318 (0%)
Query: 200 LNELIALFSKLGK-GKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
N L+ F + G+ +A V++K + G V + T+ + L ++ +F A + M
Sbjct: 349 FNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDM 408
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
G P+ +I FCK G+ +EA ++ K LIS+LC+ +
Sbjct: 409 DAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGK- 467
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+ ALDM + S + K I F+S+I LCR+ ++ A L M+ EG + FN+
Sbjct: 468 IHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNT 527
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I A+ + G++ A++++ M RG D TY GL+ G +E+ + E +
Sbjct: 528 LIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKG 587
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
S +T + LI G+C + AL+ + +M G P++ YN LI LC + + A
Sbjct: 588 LTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRG-RIQEA 646
Query: 499 EKLLEDMRLKGLHLNGIT 516
L E ++ +G+ + IT
Sbjct: 647 LNLFEKLQAEGIQPDSIT 664
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 133/295 (45%), Gaps = 5/295 (1%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V + L+ K G +A E+ N GC N TY I+ ++ + A +
Sbjct: 382 VFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILR 441
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M+ G ++ +IS CK GK EA ++ K P LI LC+ D
Sbjct: 442 EMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVD 501
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
E ++ AL + D E F+++I + R ++ A L++ M+ G P +
Sbjct: 502 E-MEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITY 560
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N +I A K G + + + + M +GL P + T L++G+ G++ A E + +
Sbjct: 561 NGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMI- 619
Query: 437 NHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
H SP VTY++LI G CK AL L +++ G+QP+ YN LI LC
Sbjct: 620 -HRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLC 673
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 175/399 (43%), Gaps = 24/399 (6%)
Query: 137 KVLETPLVLGENLVCFFKWVTS--------GVVDALLKAICSSVGKKEVYALWDIVKEIG 188
K+LE PL + E + FKW + V L+ + ++ G K + L +
Sbjct: 76 KLLELPLDV-ETSMEIFKWAGAQKGYCHSFSVYYLLIDKLGAAAGFKVIDRLL-----LQ 129
Query: 189 EKEKGVLTVEILNELIA-LFSKLG-KGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRK 246
KE+G++ E L LI + + G G+A + + G Y C + +Y ++ L
Sbjct: 130 MKEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGN 189
Query: 247 IFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVA 306
A +V M+ G P+ G ++ C + A ++ + P +
Sbjct: 190 CPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQ 249
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
LI +L + D V AL +L++ + F++VI CR+ V L+ +MI
Sbjct: 250 TLIDALSKRDR-VDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMIL 308
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
+G P + + ++ K + A +L S+ P+V + L++G+ G++ E
Sbjct: 309 KGFTPNDMTYGYLMHGLCKTCRIDEAQALL----SKVPGPNVVHFNTLVNGFVRNGRLNE 364
Query: 427 ACEILNEAKKNHSRLSPV-TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
A + + N+ + V T+ TL+ G CK F AL+L+N+M G +PN++ Y LI
Sbjct: 365 ATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILI 424
Query: 486 QSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAV 523
C K A +L +M KG LN + ALI A+
Sbjct: 425 DGFCKKG-QLEEAGLILREMLTKGFSLNTVGYNALISAL 462
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 112/255 (43%), Gaps = 1/255 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI+ K GK A ++F + GC + T+ I L R + A ++ M+
Sbjct: 456 NALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVL 515
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G + +S +I F + G+ +EA + + + LI +LC+ V+
Sbjct: 516 EGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTG-AVE 574
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
L + ++ + +I + +I C VH A + MI G P +NS+I
Sbjct: 575 KGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLI 634
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ K G + A+ + + +++ G++PD TY L+ G ++AC +L +N
Sbjct: 635 NGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFV 694
Query: 441 LSPVTYHTLIRGYCK 455
+ VT++ L+ + K
Sbjct: 695 PNDVTWNILVYNFGK 709
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 114/282 (40%), Gaps = 10/282 (3%)
Query: 140 ETPLVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEK--EKGVLTV 197
E L+L E L F T G +AL+ A+C GK ++ D+ E+ K + + T
Sbjct: 435 EAGLILREMLTKGFSLNTVGY-NALISALCKH-GK--IHEALDMFGEMSSKGCKPDIFT- 489
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
N LI ++ + + A ++ G +AN T+ I A RR A +
Sbjct: 490 --FNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVND 547
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M+ G D +I CK G ++ ++ K + P LI+ C +
Sbjct: 548 MLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGK 607
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
V AL+ + D I ++S+I LC+ + A L K+ +EG P + +N
Sbjct: 608 -VHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYN 666
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
++I + G A +L G P+ T+ L+ +
Sbjct: 667 TLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFG 708
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 169/364 (46%), Gaps = 13/364 (3%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
L+K +C + D V +G V ++N L K+G+ AA ++ +
Sbjct: 147 TLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGL----CKVGQTSAALQLLRR 202
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
N Y I+++ + K+ + A+ + +M+ G PD +IS FC GK
Sbjct: 203 VDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGK 262
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
K+A ++ + + P L+ C+E +K A ++L + K + ++
Sbjct: 263 MKDATDLFNKMIFENINPNVYTFNILVDGFCKE-RRLKEAKNVLAMMMKQGIKPDVFTYN 321
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
S++ C +K+V+ AK + + + G P ++ +I + K + AM + K M
Sbjct: 322 SLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCN 381
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP---VTYHTLIRGYCKLEEF 459
+ PDV TY L+ G G++ A ++++E H R P +TY++++ CK +
Sbjct: 382 NIIPDVVTYNSLIDGLCKLGKISYALKLVDEM---HDRGVPHDKITYNSILDALCKNHQV 438
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN-GITRA 518
D A+ LL +MKD G+QP++ Y L+ LC K A + ED+ +KG L+ I A
Sbjct: 439 DKAIALLTKMKDEGIQPDICTYTTLVDGLC-KNGRLEDARIVFEDLLVKGYILDVNIYTA 497
Query: 519 LIRA 522
+I+
Sbjct: 498 MIQG 501
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 149/322 (46%), Gaps = 10/322 (3%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
IL+ LI FS+LG+ +F V K G N T I+ L + A +K+
Sbjct: 109 ILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKV 168
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+ G + G +I+ CK G+ A + K + P + +I S+C+
Sbjct: 169 VALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCK---- 224
Query: 319 VKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
VKL + D +S K I P ++++I C + + A L +KMI E P
Sbjct: 225 VKLVNEAFDLYSEMVSK-GISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVY 283
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
FN ++ + K + A +L +M +G+KPDV+TY LM Y ++ +A I N
Sbjct: 284 TFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTI 343
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
+ + +Y +I G+CK+++ D A+ L EM + P+V YN LI LC K
Sbjct: 344 SQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLC-KLGK 402
Query: 495 WRTAEKLLEDMRLKGLHLNGIT 516
A KL+++M +G+ + IT
Sbjct: 403 ISYALKLVDEMHDRGVPHDKIT 424
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 148/310 (47%), Gaps = 2/310 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI+ F +GK K A ++FNK N T+ ++ + + A +V M++
Sbjct: 251 NALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMK 310
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD ++ +C + +A ++ ++ + P + +I C+ + V
Sbjct: 311 QGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKI-KKVD 369
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A+++ + + ++S+I LC++ + A L+ +M G P +NS++
Sbjct: 370 EAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSIL 429
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
A K + A+ +L M+ G++PD+ TYT L+ G G++E+A + +
Sbjct: 430 DALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYI 489
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
L Y +I+G+C FD +L LL++M++ G PN Y +I SL K + + AEK
Sbjct: 490 LDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDK-AEK 548
Query: 501 LLEDMRLKGL 510
LL +M +GL
Sbjct: 549 LLREMITRGL 558
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 90/187 (48%), Gaps = 2/187 (1%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
K +I F ++ SL + +L +M G + + +I+ +S+ G +
Sbjct: 69 KPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFS 128
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+L + G +P+V T T L+ G GQ+ +A + ++ L+ V+Y TLI G C
Sbjct: 129 VLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLC 188
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG 514
K+ + AL+LL + VQPNV YN +I S+C K A L +M KG+ +
Sbjct: 189 KVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMC-KVKLVNEAFDLYSEMVSKGISPDV 247
Query: 515 IT-RALI 520
+T ALI
Sbjct: 248 VTYNALI 254
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 55/123 (44%)
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
+ P P F ++ + K+ + + + + M G+ D+ + L++ ++ GQ
Sbjct: 66 KNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPL 125
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
+ +L + K + +T TLI+G C + AL+ +++ +G N Y LI
Sbjct: 126 SFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLIN 185
Query: 487 SLC 489
LC
Sbjct: 186 GLC 188
>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 924
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 151/348 (43%), Gaps = 14/348 (4%)
Query: 178 YALWDIVKEIGEKEKGVLTVEILNE------------LIALFSKLGKGKAAFEVFNKFGD 225
+ + D +G +EK + E L E LI L++K+GK A EV
Sbjct: 450 HTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCLINLYAKVGKISKALEVSKMMES 509
Query: 226 YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKE 285
G N +TY I + K + A+++ E +++ G PD II FC G
Sbjct: 510 AGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDR 569
Query: 286 AHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVI 345
A + ++++ P +I + E +K ALD+ D + F+++I
Sbjct: 570 AICMVKEMQKERHRPTSRTFMPIIHGFARAGE-MKRALDVFDMMRRSGCIPTVHTFNALI 628
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
L + + A +L +M G P + +++ Y+ GD A E +R GL+
Sbjct: 629 LGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQ 688
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
DVYTY L+ G+M+ A + E + + Y+ LI G+ + + A L
Sbjct: 689 LDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAADL 748
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
+ +MK GV+P++ Y I + C KA D A K++E+M G+ N
Sbjct: 749 MQQMKQGGVKPDIHTYTSFINACC-KAGDMLRASKMMEEMETSGVKPN 795
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 169/378 (44%), Gaps = 55/378 (14%)
Query: 115 VDGYLESSLDSFELDLHEDFVLKVLETPLVLGENLVCFFKWVTSGVVDALLKAICSSVGK 174
++G+L+ + + ED V L+ +VL N++ F G +D +AIC
Sbjct: 523 INGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAF--CGMGTMD---RAIC----- 572
Query: 175 KEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQET 234
+VKE+ +KE+ T +I F++ G+ K A +VF+ GC+ T
Sbjct: 573 --------MVKEM-QKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHT 623
Query: 235 YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR 294
+ I L ++ + A + ++M G P+ I+ + G +A +T R
Sbjct: 624 FNALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLR 683
Query: 295 EKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDV 354
++ + LD ++ EA ++++ C+ +
Sbjct: 684 DEGL--------------------------QLDVYTYEA----------LLKACCKSGRM 707
Query: 355 HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
A + +M ++ P V+N +I +++ GD+ A ++++ M+ G+KPD++TYT
Sbjct: 708 QSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQGGVKPDIHTYTSF 767
Query: 415 MSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV 474
++ G M A +++ E + + + + TY TLI G+ + + AL+ EMK G+
Sbjct: 768 INACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKALRCFQEMKLAGL 827
Query: 475 QPNVDEYNKLIQSLCLKA 492
+P+ Y+ L+ +L +A
Sbjct: 828 KPDKAVYHCLMTALLSRA 845
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 156/336 (46%), Gaps = 6/336 (1%)
Query: 190 KEKGV-LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
KE+GV +++ + ++ F+K+G AA F + D N Y I A +
Sbjct: 368 KEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMIYAYCQTCNM 427
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF- 307
D A ++ +M G + ++ + G ++ V+ +E P SVV++
Sbjct: 428 DQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAP--SVVSYG 485
Query: 308 LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
+ +L + + AL++ K+ +K +S +I ++KD A + ++ +
Sbjct: 486 CLINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKD 545
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P ++N++I A+ G M A+ M+K M+ +P T+ ++ G+A G+M+ A
Sbjct: 546 GLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKRA 605
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
++ + +++ + T++ LI G + + + A+++L+EM GV PN Y ++
Sbjct: 606 LDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMHG 665
Query: 488 LCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRA 522
D A + +R +GL L+ T AL++A
Sbjct: 666 YAALG-DTGKAFEYFTKLRDEGLQLDVYTYEALLKA 700
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 78/157 (49%)
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
+K + + + ++ R D+H A+ M + G P + V+ S+I AY+ DM A+
Sbjct: 302 KKPSRREYGLMVSYYARRGDMHRARQTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEAL 361
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
+ M+ G++ + TY+ ++ G+A G + A EAK HS ++ + Y +I Y
Sbjct: 362 SCARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMIYAY 421
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
C+ D A L+ EM+ G+ +D Y+ ++ +
Sbjct: 422 CQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTM 458
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 1/140 (0%)
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P + ++S Y++ GDM A + + MR+RG++P + YT L+ YA G MEEA
Sbjct: 304 PSRREYGLMVSYYARRGDMHRARQTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSC 363
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
+ K+ +S VTY ++ G+ K+ D A + E KD N Y +I + C
Sbjct: 364 ARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMIYAYC- 422
Query: 491 KALDWRTAEKLLEDMRLKGL 510
+ + AE L+ +M +G+
Sbjct: 423 QTCNMDQAEALVREMEGEGI 442
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 158/357 (44%), Gaps = 17/357 (4%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
LL+A+C S G E + D ++ G V I+N + + G+ A E+ N+
Sbjct: 193 LLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGM----CREGRVDDAKEILNRL 248
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
YG + +Y ++ L + +D + +M++ +P+ ++ +FC+GG
Sbjct: 249 SSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMV 308
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP--- 340
+ A V + P ++ +I+++C++ +D DF Y P
Sbjct: 309 ERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGR-----VDDAYDFLNNMGMYGCNPDTI 363
Query: 341 -FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
+++V+R LCR AK LL +M+ + PP FN+ I + G + A+++++LM
Sbjct: 364 SYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELM 423
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
G + TY L+ G+ G+++ A E+ N + +TY TL+ G C E
Sbjct: 424 PEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPNTITYTTLLTGLCHAERL 480
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
D A +LL EM N +N L+ C K A +L+ M G N IT
Sbjct: 481 DAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGF-VEEAMELVNQMMEHGCTPNLIT 536
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 134/291 (46%), Gaps = 4/291 (1%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+ N +I K G+ A++ N G YGC + +Y + L R ++ A + +M
Sbjct: 329 LCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEM 388
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+ P+ I C+ G ++A + L E L+ C +
Sbjct: 389 VRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGR- 447
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
V AL++ ++ E +++++ LC + + A LL++MI + P FN
Sbjct: 448 VDSALELFNNLPCEPNTIT---YTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNV 504
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
++S + + G + AME++ M G P++ T+ L+ G EEA E+L+
Sbjct: 505 LVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKG 564
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
L +TY +++ + + + A+++L+ ++D+G++P V YNK++ +LC
Sbjct: 565 VSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALC 615
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 121/291 (41%), Gaps = 13/291 (4%)
Query: 208 SKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDS 267
S +G A + GC + TY +EA+ + F A +V ++M G P+
Sbjct: 163 SATAEGSATRSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNI 222
Query: 268 EKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALD 324
II+ C+ G+ +A + P ++ LC D+ L +
Sbjct: 223 VTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAE 282
Query: 325 MLDDFSGEARKYAIK---PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
M+D K + F ++R CR V A +L +M G P + N VI+
Sbjct: 283 MVD-------KKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVIN 335
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
A K G + A + L M G PD +YT ++ G G+ E A E+L E + +
Sbjct: 336 AICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPP 395
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
+ VT++T I C+ + A+KL+ M + G + YN L+ C++
Sbjct: 396 NEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQG 446
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 117/264 (44%), Gaps = 2/264 (0%)
Query: 253 SVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSL 312
S C M++ G P ++ CK EA V R K P +I+ +
Sbjct: 173 SPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGM 232
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
C+E V A ++L+ S + I +++V++ LC + K L ++M+ + P
Sbjct: 233 CREGR-VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPN 291
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
F+ ++ + + G + A+++L+ M G P+ +++ G++++A + LN
Sbjct: 292 EVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLN 351
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
++Y T++RG C+ ++ A +LL EM PN +N I LC K
Sbjct: 352 NMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKG 411
Query: 493 LDWRTAEKLLEDMRLKGLHLNGIT 516
L A KL+E M G + +T
Sbjct: 412 L-IEQAIKLIELMPEYGCSVGIVT 434
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 146/297 (49%), Gaps = 3/297 (1%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I K G + A E+ GC + +Y + A + +D + +M
Sbjct: 256 NAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFS 315
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ +IS C+ G+ EA V + EK++ P LIS+LC+E +
Sbjct: 316 RGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGR-LD 374
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
LA+ ++D I +++++ +LC+ + + A + +K+ G PP + +N++I
Sbjct: 375 LAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMI 434
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
SA GD + A+ M+ M S+G+ PD TY L+S G +EEA +L++ +++ R
Sbjct: 435 SALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFR 494
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
+ ++Y+ ++ G CK+ D A+ + EM + G +PN Y LI+ + WRT
Sbjct: 495 PTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAG--WRT 549
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 112/242 (46%), Gaps = 2/242 (0%)
Query: 248 FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF 307
F+ + E ++ G PD K+I F ++A V + E P
Sbjct: 94 FNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEIL-ESHTEPDVFAYNA 152
Query: 308 LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
+IS C+ ++ ++ A +L+ I ++ +I SLC + + A T+L +++ +
Sbjct: 153 VISGFCKVNQ-IEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLD 211
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
P + +I A G + AM++L+ M +RGL PD+YTY ++ G G +E A
Sbjct: 212 NCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERA 271
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
E++ ++Y+ L+R + ++D KL+ EM G +PN Y+ LI S
Sbjct: 272 AELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISS 331
Query: 488 LC 489
LC
Sbjct: 332 LC 333
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 124/289 (42%), Gaps = 36/289 (12%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I+ F K+ + +AA +V N+ G + + TY I +L R+ A +V ++++
Sbjct: 151 NAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLL 210
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
+P + YT+ E + + +
Sbjct: 211 DNCMPTV--------------------ITYTILIEATIV----------------EGGIN 234
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A+ +L++ + ++++IR +C+ V A L++ + S+G P +N ++
Sbjct: 235 EAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILL 294
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
A+ G +++ M SRG +P+ TY+ L+S G+++EA +L +
Sbjct: 295 RAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELT 354
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+Y LI CK D A+ +++ M G P++ YN ++ +LC
Sbjct: 355 PDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALC 403
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 99/198 (50%), Gaps = 5/198 (2%)
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+ +I+ K++ A ++ + S P A +N+VIS + K + A ++L M++
Sbjct: 117 TKLIKGFFNFKNIEKASRVMEILESHTEPDVFA-YNAVISGFCKVNQIEAATQVLNRMKA 175
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
RG PD+ TY ++ N ++ A +L++ ++ + +TY LI +
Sbjct: 176 RGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINE 235
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALI 520
A+KLL EM G+ P++ YN +I+ +C + + R AE L+ + KG + I+ L+
Sbjct: 236 AMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAE-LITSLTSKGCEPDVISYNILL 294
Query: 521 RAVKELEEDAIENGEALV 538
RA L + + GE LV
Sbjct: 295 RAF--LNQGKWDEGEKLV 310
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV 444
KAG ++ L+ + ++G PDV T L+ G+ N +E+A ++ E ++H+
Sbjct: 90 KAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESHTEPDVF 148
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
Y+ +I G+CK+ + + A ++LN MK G P++ YN +I SLC
Sbjct: 149 AYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLC 193
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 91/235 (38%), Gaps = 36/235 (15%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI+ + G+ A V + + +Y I AL + D A + + MI G
Sbjct: 328 LISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNG 387
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR---------------------------- 294
LPD I++ CK G A +A ++ R
Sbjct: 388 CLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRAL 447
Query: 295 -------EKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRS 347
K + P + LIS LC+ D V+ A+ +LDD + + ++ V+
Sbjct: 448 GMVPAMISKGIDPDEITYNSLISCLCR-DGLVEEAIGLLDDMEQSGFRPTVISYNIVLLG 506
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
LC+++ + A + ++MI +G P + +I AG T AME+ + SR
Sbjct: 507 LCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSR 561
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 139/302 (46%), Gaps = 2/302 (0%)
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
+A + N+ +G N + I L R D+A SV KM + G PD+ +I
Sbjct: 114 SAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLI 173
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR 334
+ C GK KEA ++ P +I+ LC+ T+ +A+ +
Sbjct: 174 NGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTI-MAVRVFRKMEQNRG 232
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
K + ++++I SLC+ + V+ A LS+M+ G PP +N+++ + G + A
Sbjct: 233 KPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATR 292
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+ K M R + PD T+ L+ G G + EA + + + + TY+ L+ GYC
Sbjct: 293 LFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYC 352
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG 514
+ D A+K+L M G PN+ YN LI C K+ A++LL +M K L +
Sbjct: 353 LHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYC-KSKRMNEAKRLLSEMSEKNLTPDT 411
Query: 515 IT 516
+T
Sbjct: 412 VT 413
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 136/311 (43%), Gaps = 2/311 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
LN LI +L A V K G + T+ I L A + +M+
Sbjct: 134 LNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMV 193
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+G P+ +I+ CK G A V+ + + P +I SLC+ D V
Sbjct: 194 WSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCK-DRLV 252
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
A++ L + + +++++ C + ++ A L +M+ P FN +
Sbjct: 253 NEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNIL 312
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+ K G ++ A + + M +G +P+ YTY LM GY QM+EA ++L
Sbjct: 313 VDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGC 372
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
+ +Y+ LI GYCK + + A +LL+EM + + P+ Y+ L+Q LC + R A
Sbjct: 373 APNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLC-QVGRPREAL 431
Query: 500 KLLEDMRLKGL 510
L ++M GL
Sbjct: 432 NLFKEMCSSGL 442
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 154/362 (42%), Gaps = 20/362 (5%)
Query: 131 HEDFVLKVLETPLVLG--ENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIG 188
H DF + V+ LG + + F + L+ +C+ KE L++ + G
Sbjct: 146 HVDFAVSVMGKMFKLGIQPDAITF---------NTLINGLCNEGKIKEAVGLFNEMVWSG 196
Query: 189 EKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
E V++ N +I K G A VF K N TY I++L + ++
Sbjct: 197 H-EPNVISY---NTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLV 252
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
+ A +M++ G PD I+ FC G+ EA ++ + + P L
Sbjct: 253 NEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNIL 312
Query: 309 ISSLCQEDET--VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
+ LC+E + + + + E Y +++++ C + A +L MI
Sbjct: 313 VDGLCKEGMVSEARCVSETMTEKGAEPNAYT---YNALMDGYCLHNQMDEAIKVLGIMIG 369
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
+G P + +N +I+ Y K+ M A +L M + L PD TY+ LM G G+ E
Sbjct: 370 KGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPRE 429
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A + E + + Y L+ G+CK D ALKLL EM + ++PN+ Y LI+
Sbjct: 430 ALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIR 489
Query: 487 SL 488
+
Sbjct: 490 GM 491
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 143/305 (46%), Gaps = 2/305 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N ++ F LG+ A +F + + + T+ ++ L + + A V E M E
Sbjct: 275 NTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTE 334
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G+ P++ ++ +C + EA V + K P S LI+ C+ + +
Sbjct: 335 KGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKS-KRMN 393
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A +L + S + +S++++ LC++ A L +M S G P ++ ++
Sbjct: 394 EAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILL 453
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ K G + A+++LK M R +KP++ YT L+ G G++E A E+ ++ + R
Sbjct: 454 DGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIR 513
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
TY+ +I+G K D A + +M+D G P+ YN +IQ L+ D TA +
Sbjct: 514 PDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGF-LQNQDSSTAIQ 572
Query: 501 LLEDM 505
L+++M
Sbjct: 573 LIDEM 577
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 3/224 (1%)
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
H + T A +K PQ F S D ++ AL + ++ F +
Sbjct: 47 HHITTSACTEKPSLPQKHCGF--GSNTSNDISIDDALTSFYRMVRMNPRPSVVEFGKFLG 104
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
S+ + K A +L ++M G N +I+ + + A+ ++ M G++P
Sbjct: 105 SIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQP 164
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
D T+ L++G N G+++EA + NE + + ++Y+T+I G CK A+++
Sbjct: 165 DAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVF 224
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+M+ +PNV YN +I SLC L A + L +M +G+
Sbjct: 225 RKMEQNRGKPNVVTYNTIIDSLCKDRL-VNEAVEFLSEMVDRGI 267
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 139/312 (44%), Gaps = 20/312 (6%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+ L+ LI F L + AF V K G + T+ I + A + +
Sbjct: 96 IYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFD 155
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
KMI G PD G +I+ CK G A + +K P +I SLC+ D
Sbjct: 156 KMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCK-D 214
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
V A ++ + + I ++S+I +LC + + TLL++M+ P F
Sbjct: 215 RQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSF 274
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N+V+ A K G +T A +++ M RG++P+V TYT LM G+ +M+EA ++ +
Sbjct: 275 NTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVC 334
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFD------------C-------ALKLLNEMKDVGVQPN 477
+ ++Y+TLI GYCK++ D C A+K+ + M G PN
Sbjct: 335 KGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPN 394
Query: 478 VDEYNKLIQSLC 489
V YN LI C
Sbjct: 395 VISYNTLINGYC 406
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 131/317 (41%), Gaps = 37/317 (11%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N+L+ +K+ + ++ +G N T + I + +A+SV K++
Sbjct: 64 FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKIL 123
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G PD+ +I C GK EA
Sbjct: 124 KLGHQPDTATFTTLIRGICVEGKIGEA--------------------------------- 150
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
L + D GE + + + ++I LC++ + A LL M+ + P +N++
Sbjct: 151 ---LHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTI 207
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I + K +T A + M ++G+ PD++TY L+ N + + +LNE +
Sbjct: 208 IDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKI 267
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
V+++T++ CK + A ++++M GV+PNV Y L+ CL + + A
Sbjct: 268 MPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLS-EMDEAV 326
Query: 500 KLLEDMRLKGLHLNGIT 516
K+ + M KG N I+
Sbjct: 327 KVFDTMVCKGCMPNVIS 343
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 160/356 (44%), Gaps = 32/356 (8%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEK--EKGVLTVEILNELIALFSKLGKGKAAF 217
VVDAL K + +V D+V ++ ++ E V+T L + L S++ + A
Sbjct: 277 VVDALCK-------EGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDE---AV 326
Query: 218 EVFNKFGDYGCVANQETY------YFTIEALSRRKIF-------------DWAWSVCEKM 258
+VF+ GC+ N +Y Y I+ + + + D A V + M
Sbjct: 327 KVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTM 386
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+ G +P+ +I+ +CK + +A ++ +++ P + LI LC E
Sbjct: 387 VCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHV-ER 445
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
++ A+ + + ++ + + ++ LC+ + + A LL + P V N
Sbjct: 446 LQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNI 505
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
I +AG++ A ++ + S+GL+PDV+TY+ +++G G ++EA ++ E +N
Sbjct: 506 AIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENG 565
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
L+ Y+T+ RG+ + E A++LL EM G + ++ L LD
Sbjct: 566 CTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLD 621
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 91/189 (48%), Gaps = 2/189 (1%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F+ ++ S+ +MK +L +M S G PP + +I+++ + A +L +
Sbjct: 64 FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKIL 123
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G +PD T+T L+ G G++ EA + ++ R VTY TLI G CK+
Sbjct: 124 KLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTS 183
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RAL 519
A++LL M QPNV YN +I SLC K A L +M KG+ + T +L
Sbjct: 184 AAIRLLGSMVQKNCQPNVFAYNTIIDSLC-KDRQVTEAFNLFSEMVTKGISPDIFTYNSL 242
Query: 520 IRAVKELEE 528
I A+ L E
Sbjct: 243 IHALCNLCE 251
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 1/160 (0%)
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
+ GA + ++M+ PPP FN ++++ +K + + + M S G+ P++YT
Sbjct: 42 IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
L++ + + ++ A +L + K + T+ TLIRG C + AL L ++M G
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEG 161
Query: 474 VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
+P+V Y LI LC K + A +LL M K N
Sbjct: 162 FRPDVVTYGTLINGLC-KVGNTSAAIRLLGSMVQKNCQPN 200
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 97/236 (41%), Gaps = 1/236 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI + K+ + A +F + + + TY I L + A ++ +M+
Sbjct: 399 NTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVA 458
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
+P+ ++ + CK EA + + P V I +C+ E ++
Sbjct: 459 CSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGE-LE 517
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A D+ + S + + + +S +I LCR + A L +M G ++N++
Sbjct: 518 AARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTIT 577
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
+ + + + A+++L+ M +RG D T T + ++ G + +IL K
Sbjct: 578 RGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILRNGCK 633
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 152/321 (47%), Gaps = 9/321 (2%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N++++ K+ K A + G T+ I S ++A+S+ K++
Sbjct: 56 FNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKIL 115
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G PD+ V ++ C GK KEA + K+ + Q LI+ LC+ ET
Sbjct: 116 KLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGET- 174
Query: 320 KLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ AL +L G ++P ++++I S C+ K V A L S+MI + P
Sbjct: 175 RAALQLLRKIEG---LLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVT 231
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
FNS+I + G + A+ +L M + P+VYT+ L+ G G++++A +L+
Sbjct: 232 FNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMI 291
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
K + VTY +L+ GY ++E + A + N + GV PNV Y+ +I LC +
Sbjct: 292 KQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKM-V 350
Query: 496 RTAEKLLEDMRLKGLHLNGIT 516
A KL ++M LK + N +T
Sbjct: 351 DEAVKLFKEMHLKNMTPNTVT 371
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 165/354 (46%), Gaps = 7/354 (1%)
Query: 161 VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVF 220
V+ LL+ +C + KE D V +++ L LI K G+ +AA ++
Sbjct: 126 VNTLLRGLCLNGKVKEALNFHDHVI----RKRFHLDQVSYGTLINGLCKSGETRAALQLL 181
Query: 221 NKF-GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
K G + Y I++ + K+ A+ + +MI P+ +I FC
Sbjct: 182 RKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCI 241
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
G+ KEA + + P LI LC+E E VK A +L + + +
Sbjct: 242 VGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGE-VKKATSVLSVMIKQGVEPNVV 300
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
++S++ +K+V+ AK + + + G P ++ +I+ K + A+++ K M
Sbjct: 301 TYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEM 360
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
+ + P+ TY+ L+ G G++ + ++++E + +TY++L+ G CK +
Sbjct: 361 HLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQV 420
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
D A+ LL +MKD G+QP++ Y L+ LC K + A+++ +D+ KG LN
Sbjct: 421 DKAIALLTKMKDEGIQPDMSTYTTLVDGLC-KNGRLKDAQRIYQDLLCKGYPLN 473
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 155/349 (44%), Gaps = 18/349 (5%)
Query: 163 ALLKAICSSVGKKEVYALWD--IVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVF 220
A++ + C + Y L+ IVK+I V N LI F +G+ K A +
Sbjct: 199 AIIDSFCKDKLVIDAYDLYSEMIVKKIYP------NVVTFNSLIYGFCIVGQLKEAVGLL 252
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
N+ N T+ I+ L + A SV MI+ G P+ ++ +
Sbjct: 253 NEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLV 312
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDM-LDDFSGEARKY 336
+ +A V+ + + P + +I+ LC+ DE VKL +M L + + Y
Sbjct: 313 KEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTY 372
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
SS+I LC+ + L+ ++ + G P +NS+++ K + A+ +L
Sbjct: 373 -----SSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALL 427
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
M+ G++PD+ TYT L+ G G++++A I + L+ Y +I G CK
Sbjct: 428 TKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKE 487
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
FD AL LL++M+D G P+ Y LI +L K A KLL +M
Sbjct: 488 GFFDEALSLLSQMEDNGCMPDAVTYETLISAL-FKNNKNGKAVKLLREM 535
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 80/187 (42%), Gaps = 1/187 (0%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A ++F + N TY I+ L + W + +++ G + +++
Sbjct: 353 AVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLN 412
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
CK + +A + T +++ + P S L+ LC+ +K A + D +
Sbjct: 413 GLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGR-LKDAQRIYQDLLCKGYP 471
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
I+ ++ +I LC+ A +LLS+M G P + ++ISA K A+++
Sbjct: 472 LNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKL 531
Query: 396 LKLMRSR 402
L+ M +R
Sbjct: 532 LREMIAR 538
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 151/301 (50%), Gaps = 4/301 (1%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVC-EKMIETGSLPDSEKVGKIISWFCKGGKAKE 285
G N TY + AL R + A V + M G P+ +++ FC+ G+
Sbjct: 149 GVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDA 208
Query: 286 AHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVI 345
A + + RE + P +++ LC+ ++ A M D+ + E +++++
Sbjct: 209 AERLVGVMREGGVRPSLVTFNTVVNGLCKAGR-MEDARKMFDEMAREGLTPDGVSYNTLV 267
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
C+ +H A + ++M +G P F S+I A +AG++ A+ ++ MR RGL+
Sbjct: 268 SGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLR 327
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
+ +T+T L+ G+ G +++A + E ++ + S V Y+ LI GYCKL D A +L
Sbjct: 328 MNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEAREL 387
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAVK 524
++EM+ G++P+V Y+ ++ C K D +A +L M KG+ + IT +LIR +
Sbjct: 388 IHEMEAKGMKPDVVTYSTILSGYC-KIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLC 446
Query: 525 E 525
E
Sbjct: 447 E 447
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 131/269 (48%), Gaps = 13/269 (4%)
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEA-HVVYTLAREKKMYPPQSVVAFLISSLCQED 316
M+ G P+ ++ C G+ +EA VV R P L+++ C+
Sbjct: 145 MLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAG 204
Query: 317 ETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
E +D + G R+ ++P F++V+ LC+ + A+ + +M EG P
Sbjct: 205 E-----VDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPD 259
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+N+++S Y KAG + A+ + M +G+ PDV T+T L+ G +E A ++
Sbjct: 260 GVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVG 319
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC-LK 491
+ ++ R++ T+ LI G+C+ D AL + EM++ +QP+V YN LI C L
Sbjct: 320 QMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLG 379
Query: 492 ALDWRTAEKLLEDMRLKGLHLNGITRALI 520
+D A +L+ +M KG+ + +T + I
Sbjct: 380 RMD--EARELIHEMEAKGMKPDVVTYSTI 406
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 167/378 (44%), Gaps = 44/378 (11%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGV---LTVEILNELIALFSKLGKGKAAFE 218
+ L++A+C+ ++E + +G+ +G V N L+A F + G+ AA
Sbjct: 158 NILVRALCARGQREEALGV------VGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAER 211
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+ + G + T+ + L + + A + ++M G PD ++S +C
Sbjct: 212 LVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYC 271
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDM---------- 325
K G EA V+ +K + P LI ++C+ + V L M
Sbjct: 272 KAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEF 331
Query: 326 -----LDDFS------------GEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKM 364
+D F E R+ I+P ++ +I C++ + A+ L+ +M
Sbjct: 332 TFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEM 391
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
++G P +++++S Y K GD A E+ + M +G+ PD TY+ L+ G ++
Sbjct: 392 EAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRL 451
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
+ACE+ + + + TY TLI G+CK AL L +EM GV P+V Y+ L
Sbjct: 452 GDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVL 511
Query: 485 IQSLCLKALDWRTAEKLL 502
I L K+ + A++LL
Sbjct: 512 IDGLS-KSARTKEAQRLL 528
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 155/349 (44%), Gaps = 7/349 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ ++ +C + ++ ++D + G GV N L++ + K G A VF
Sbjct: 229 NTVVNGLCKAGRMEDARKMFDEMAREGLTPDGV----SYNTLVSGYCKAGCLHEALAVFA 284
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ G V + T+ I A+ R + A ++ +M E G + +I FC+ G
Sbjct: 285 EMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNG 344
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+A + RE ++ P LI+ C+ + A +++ + + K + +
Sbjct: 345 FLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDE-ARELIHEMEAKGMKPDVVTY 403
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
S+++ C++ D A L KM+ +G P ++S+I + + A E+ + M
Sbjct: 404 STILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQ 463
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
GL+PD +TYT L+ G+ G +++A + +E K VTY LI G K
Sbjct: 464 LGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKE 523
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
A +LL ++ P+ +Y L+ C + ++++ LL+ +KGL
Sbjct: 524 AQRLLFKLYYEDPVPDNIKYEALMH--CCRTAEFKSVVALLKGFSMKGL 570
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 83/151 (54%), Gaps = 5/151 (3%)
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P +N+V+ A S A + A +L M G+ P+VYTY L+ GQ EEA
Sbjct: 115 GYAPSLLAYNAVLLALSDA-SLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173
Query: 428 CEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
++ + + + +P VTY+TL+ +C+ E D A +L+ M++ GV+P++ +N ++
Sbjct: 174 LGVVGDDMRG-AGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVV 232
Query: 486 QSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
LC KA A K+ ++M +GL +G++
Sbjct: 233 NGLC-KAGRMEDARKMFDEMAREGLTPDGVS 262
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 134/353 (37%), Gaps = 60/353 (16%)
Query: 191 EKGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
+KGV+ V LI + G + A + + + G N+ T+ I+ R D
Sbjct: 288 QKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLD 347
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A ++M E P +I+ +CK G+ EA + K M P + ++
Sbjct: 348 DALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTIL 407
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMI 365
S C+ +T D + + + K + P +SS+IR LC + + A L KM+
Sbjct: 408 SGYCKIGDT-----DSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKML 462
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
G P + ++I + K G++ A+ + M +G+ PDV TY+ L+ G + + +
Sbjct: 463 QLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTK 522
Query: 426 EA-------------------------CE------------------ILNEAKK------ 436
EA C ++N+A K
Sbjct: 523 EAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSML 582
Query: 437 -NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
H +L Y LI G+C+ AL ++ G PN L++ L
Sbjct: 583 DRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGL 635
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 146/297 (49%), Gaps = 3/297 (1%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I K G + A E+ GC + +Y + A + +D + +M
Sbjct: 246 NAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFS 305
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ +IS C+ G+ EA V + EK++ P LIS+LC+E +
Sbjct: 306 RGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGR-LD 364
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
LA+ ++D I +++++ +LC+ + + A + +K+ G PP + +N++I
Sbjct: 365 LAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMI 424
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
SA GD + A+ M+ M S+G+ PD TY L+S G +EEA +L++ +++ R
Sbjct: 425 SALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFR 484
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
+ ++Y+ ++ G CK+ D A+ + EM + G +PN Y LI+ + WRT
Sbjct: 485 PTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAG--WRT 539
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 126/273 (46%), Gaps = 13/273 (4%)
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+++E+ + PD +IS FCK + + A V + + P +I SLC
Sbjct: 127 EILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRR 186
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ + LAL +LD + + ++ +I + ++ A LL +M++ G P +
Sbjct: 187 K-LGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTY 245
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N++I K G + A E++ + S+G KPDV +Y L+ + N G+ +E +++ E
Sbjct: 246 NAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFS 305
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC------- 489
+ VTY LI C+ D A+ +L M + + P+ Y+ LI +LC
Sbjct: 306 RGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDL 365
Query: 490 -LKALDWRTAEKLLEDMRLKGLHLNGITRALIR 521
+ +D+ + L D+ ++ N I AL +
Sbjct: 366 AIGIMDYMISNGCLPDI----VNYNTILAALCK 394
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 111/242 (45%), Gaps = 2/242 (0%)
Query: 248 FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF 307
F+ + E ++ G PD K+I F ++A V + E P
Sbjct: 84 FNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEIL-ESHTEPDVFAYNA 142
Query: 308 LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
+IS C+ + ++ A +L+ I ++ +I SLC + + A +L +++ +
Sbjct: 143 VISGFCKVNR-IEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLD 201
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
P + +I A G + AM++L+ M +RGL PD+YTY ++ G G +E A
Sbjct: 202 NCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERA 261
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
E++ + ++Y+ L+R + ++D KL+ EM G +PN Y+ LI S
Sbjct: 262 AELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISS 321
Query: 488 LC 489
LC
Sbjct: 322 LC 323
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 123/289 (42%), Gaps = 36/289 (12%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I+ F K+ + +AA +V N+ G + + TY I +L R+ A V ++++
Sbjct: 141 NAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLL 200
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
+P + YT+ E + + +
Sbjct: 201 DNCMP--------------------TVITYTILIEATIV----------------EGGIN 224
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A+ +L++ + ++++IR +C+ V A L++ + S+G P +N ++
Sbjct: 225 EAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILL 284
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
A+ G +++ M SRG +P+ TY+ L+S G+++EA +L +
Sbjct: 285 RAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELT 344
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+Y LI CK D A+ +++ M G P++ YN ++ +LC
Sbjct: 345 PDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALC 393
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 100/198 (50%), Gaps = 5/198 (2%)
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+ +I+ K++ A ++ + S P A +N+VIS + K + A ++L M++
Sbjct: 107 TKLIKGFFNFKNIEKASRVMEILESHTEPDVFA-YNAVISGFCKVNRIEAATQVLNRMKA 165
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
RG PD+ TY ++ N ++ A ++L++ ++ + +TY LI +
Sbjct: 166 RGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINE 225
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALI 520
A+KLL EM G+ P++ YN +I+ +C + + R AE L+ + KG + I+ L+
Sbjct: 226 AMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAE-LITSLTSKGCKPDVISYNILL 284
Query: 521 RAVKELEEDAIENGEALV 538
RA L + + GE LV
Sbjct: 285 RAF--LNQGKWDEGEKLV 300
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 67/123 (54%), Gaps = 4/123 (3%)
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV 444
KAG ++ L+ + ++G PDV T L+ G+ N +E+A ++ E ++H+
Sbjct: 80 KAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESHTEPDVF 138
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK---ALDWRTAEKL 501
Y+ +I G+CK+ + A ++LN MK G P++ YN +I SLC + L + ++L
Sbjct: 139 AYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQL 198
Query: 502 LED 504
L D
Sbjct: 199 LLD 201
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 91/235 (38%), Gaps = 36/235 (15%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI+ + G+ A V + + +Y I AL + D A + + MI G
Sbjct: 318 LISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNG 377
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR---------------------------- 294
LPD I++ CK G A +A ++ R
Sbjct: 378 CLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRAL 437
Query: 295 -------EKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRS 347
K + P + LIS LC+ D V+ A+ +LDD + + ++ V+
Sbjct: 438 GMVPAMISKGVDPDEITYNSLISCLCR-DGLVEEAIGLLDDMEQSGFRPTVISYNIVLLG 496
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
LC+++ + A + ++MI +G P + +I AG T AME+ + SR
Sbjct: 497 LCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSR 551
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 165/380 (43%), Gaps = 24/380 (6%)
Query: 138 VLETPLVLGE--------NLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGE 189
VLE L+LG+ NL + W+ + +C + E L D G
Sbjct: 203 VLEAGLLLGKVIQRGMSINLFTYNIWI---------RGLCEAGRLPEAVRLVD-----GM 248
Query: 190 KEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
+ V V N LI K + A + + GC+ + TY I+ + +
Sbjct: 249 RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQ 308
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A + + + G +PD +I+ C G + A ++ A+ K + P V L+
Sbjct: 309 EATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLV 368
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
LC + + AL ++++ + E I+ ++ VI LC+M ++ A +++ I +G
Sbjct: 369 KGLCLQGLILH-ALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGY 427
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
P FN++I Y K + A+++++ M G+ PD TY +++G G++ E E
Sbjct: 428 LPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNE 487
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
E +P+TY+ LI +C+ + + A K++ +M G+ P+ +N LI C
Sbjct: 488 TFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFC 547
Query: 490 LKALDWRTAEKLLEDMRLKG 509
D A L + + KG
Sbjct: 548 RNG-DLEGAYLLFQKLEEKG 566
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 140/344 (40%), Gaps = 44/344 (12%)
Query: 204 IALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGS 263
I +++ G+ + A + F + + C Y ++AL D A V +M+ G
Sbjct: 58 IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 117
Query: 264 LPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKL 321
PD + FC + H+ L R P + VA+ ++ L T
Sbjct: 118 SPDLHTHTIRLRSFCLTAR---PHIALRLLRA---LPHRGAVAYCTVVCGLYAHGHTHD- 170
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG------------- 368
A + D + F+ V+ +LC+ DV A LL K+I G
Sbjct: 171 ARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIR 230
Query: 369 ---------------------PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
P +N++I K AM L+ M ++G PD
Sbjct: 231 GLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPD 290
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
+TY ++ GY ++EA E+L +A VTY +LI G C + + AL+L N
Sbjct: 291 DFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFN 350
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH 511
E + G++P++ YN L++ LCL+ L A +++ +M +G H
Sbjct: 351 EAQAKGIKPDIVVYNSLVKGLCLQGLILH-ALQVMNEMAEEGCH 393
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 123/297 (41%), Gaps = 9/297 (3%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G + A E+FN+ G + Y ++ L + + A V +M E G PD +
Sbjct: 340 GDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTY 399
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
+I+ CK G +A VV A K P LI C+ +L LD
Sbjct: 400 NIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCK-----RLKLDSALQLV 454
Query: 331 GEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
+Y I P ++SV+ LC+ V+ +MI +G P +N +I + ++
Sbjct: 455 ERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRS 514
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
M A +++ M GL PD ++ L+ G+ G +E A + + ++ + T+
Sbjct: 515 NKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTF 574
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
+TLI + A K+ +EM G + + Y LI C A R L+E
Sbjct: 575 NTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVE 631
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 140/319 (43%), Gaps = 5/319 (1%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
V ++L+K +C + ++AL ++ E+ E E ++ N +I K+G A V
Sbjct: 363 VYNSLVKGLC--LQGLILHAL-QVMNEMAE-EGCHPDIQTYNIVINGLCKMGNISDATVV 418
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
N G + + T+ I+ +R D A + E+M E G PD+ +++ CK
Sbjct: 419 MNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCK 478
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
GK E + + K +P LI + C+ ++ ++ A ++ S E
Sbjct: 479 AGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNK-MEEASKVIVKMSQEGLHPDAV 537
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
F+++I CR D+ GA L K+ +G FN++I A+S +M A ++ M
Sbjct: 538 SFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEM 597
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
S+G + D YTY L+ G ++ A L E K S T+ +I
Sbjct: 598 LSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRV 657
Query: 460 DCALKLLNEMKDVGVQPNV 478
A+ +++ M +GV P V
Sbjct: 658 FQAVGIIHIMVKIGVVPEV 676
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 82/191 (42%), Gaps = 7/191 (3%)
Query: 337 AIKP-FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
I P + + IR+ R + A +M PP +N+++ A A A ++
Sbjct: 49 TIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKV 108
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
M + G+ PD++T+T + + + A +L V Y T++ G
Sbjct: 109 YVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHR----GAVAYCTVVCGLYA 164
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
A +L ++M V PN+ +NK++ +LC + D A LL + +G+ +N
Sbjct: 165 HGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRG-DVLEAGLLLGKVIQRGMSINLF 223
Query: 516 TRAL-IRAVKE 525
T + IR + E
Sbjct: 224 TYNIWIRGLCE 234
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 152/339 (44%), Gaps = 7/339 (2%)
Query: 180 LWDIVKEIGEK--EKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYF 237
L + E+GE+ + V+T N L+ + + + A + + G ++ T+
Sbjct: 169 LETVYSEMGERGIKPDVVT---FNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTT 225
Query: 238 TIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKK 297
++ A V +M+E G P V +I+ +CK G+ ++A
Sbjct: 226 LMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANG 285
Query: 298 MYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGA 357
P Q ++ LCQ V AL ++D E + ++ V+ LC+ + A
Sbjct: 286 FEPDQITYNTFVNGLCQNGH-VGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 344
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
K +L++M+ G P FN++I A + A+++ + + +GL PDVYT+ L++
Sbjct: 345 KGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINA 404
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
G + A + E K + VTY+TLI C L + AL LL EM+ G +
Sbjct: 405 LCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRS 464
Query: 478 VDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
YN +I LC K + AE++ + M L+G+ N IT
Sbjct: 465 TVTYNTIIDGLC-KKMRIEEAEEVFDQMDLQGISRNAIT 502
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 153/325 (47%), Gaps = 10/325 (3%)
Query: 191 EKGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
E+G L + N LI + + A ++ + G + T+ I AL +
Sbjct: 353 ERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQ 412
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF-- 307
A + E+M +G PD +I C GK +A + L + P+S V +
Sbjct: 413 LALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKA--LDLLKEMESAGCPRSTVTYNT 470
Query: 308 LISSLCQEDETVKLALDMLD--DFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI 365
+I LC++ ++ A ++ D D G +R AI F+++I LC+ K + A L+S+MI
Sbjct: 471 IIDGLCKK-MRIEEAEEVFDQMDLQGISRN-AIT-FNTLIDGLCKDKRIDDANQLISQMI 527
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
SEG P N +NS+++ Y K GD+ A ++L+ M + G + DV TY L++G G+ +
Sbjct: 528 SEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQ 587
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
A ++L + R +P Y+ +I+ + A+ L EM +VG P+ Y +
Sbjct: 588 VALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVF 647
Query: 486 QSLCLKALDWRTAEKLLEDMRLKGL 510
+ LC R A L +M KG
Sbjct: 648 RGLCRGGGSIREAFDFLLEMVDKGF 672
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 136/297 (45%), Gaps = 14/297 (4%)
Query: 226 YGCVANQETYYFTIEAL---SRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+G A+ Y + L S+ K+ + +S +M E G PD ++ C+ +
Sbjct: 144 FGIQADTVVYNHLLNVLVEGSKMKLLETVYS---EMGERGIKPDVVTFNTLMKALCRAHQ 200
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDM---LDDFSGEARKYAIK 339
+ A ++ + P ++ L+ +E ++K AL + + + K +
Sbjct: 201 VRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEG-SIKAALRVKARMLEMGCSPTKVTV- 258
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
+ +I C++ V A + + I+ G P +N+ ++ + G + A++++ +M
Sbjct: 259 --NVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVM 316
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
G PDV+TY +++ GQ+EEA ILN+ + T++TLI C
Sbjct: 317 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRL 376
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ AL L ++ G+ P+V +N LI +LC K D + A +L E+M+ G + +T
Sbjct: 377 EEALDLARQVTLKGLSPDVYTFNILINALC-KVGDPQLALRLFEEMKSSGCTPDEVT 432
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 161/362 (44%), Gaps = 8/362 (2%)
Query: 155 WVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGK 214
W +ALL +C+ + AL++ + + G V N L+ F K+GK
Sbjct: 82 WPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPD----VVTYNTLLHGFCKVGKLD 137
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
A ++F+ G V + TY I + D A + ++M+ +PD ++
Sbjct: 138 EALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLV 197
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR 334
+ CK G+ EA + L +K P + LIS LC+E ++ A +L+
Sbjct: 198 NGLCKNGRVDEARM---LIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGC 254
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
K I ++++I L R + V A L ++ +G P +N +I K + A E
Sbjct: 255 KPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFE 314
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+ + GL+PD TYT + G G++E+A +L + + V+++ +I G C
Sbjct: 315 LFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLC 374
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG 514
K + D A LL+ M+ G PN +N LI C +A W+ A ++M +G+
Sbjct: 375 KEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQC-RAGKWKKAMTTFKEMLKRGVKPTV 433
Query: 515 IT 516
+T
Sbjct: 434 VT 435
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 142/331 (42%), Gaps = 8/331 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+AL+ + G E L+ V G + + V N LI K + AFE+F+
Sbjct: 262 NALIHGLAREQGVSEALKLFGSVLRQGYEPE----VPTYNILIDGLLKEDRVNEAFELFS 317
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+G + TY I+ L + + A + + M E G +PD +I+ CK
Sbjct: 318 GLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEK 377
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ EA V+ + K P LI C+ + K A+ + K + +
Sbjct: 378 RVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKK-AMTTFKEMLKRGVKPTVVTY 436
Query: 342 SSVIRSLCRMKD---VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
+ ++ LC+ + + A TL MI +G P ++++I KAG + A +L
Sbjct: 437 NILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGA 496
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M ++G P+VYTY L+SG +++EA E+ + +TY T+I CK E
Sbjct: 497 MEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEM 556
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
D AL L + + GV P Y LI LC
Sbjct: 557 VDKALALFDGSLEAGVVPTSGMYFSLIDGLC 587
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 155/357 (43%), Gaps = 33/357 (9%)
Query: 192 KGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWA 251
KG+ + N I+ + + A VF+ +G N+ TY + L A
Sbjct: 45 KGLCDISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDA 104
Query: 252 WSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISS 311
++ E+MI+ G PD ++ FCK GK EA ++ A ++ P LI+
Sbjct: 105 QALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALING 164
Query: 312 LCQE---DETVKLALDMLDD------------FSG--------EARKYAIK--------P 340
C+ DE ++ M+ + +G EAR +
Sbjct: 165 FCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVIT 224
Query: 341 FSSVIRSLCR-MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
+S++I LCR ++ + A+ LL KM+ G P +N++I ++ ++ A+++ +
Sbjct: 225 YSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSV 284
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
+G +P+V TY L+ G ++ EA E+ + K+ +TY I G CK
Sbjct: 285 LRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRV 344
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ AL +L +M + G P+V +N +I LC K AE LL M KG N I+
Sbjct: 345 EDALLMLKDMDEKGCVPDVVSHNAVINGLC-KEKRVDEAEVLLSGMEAKGCSPNAIS 400
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 119/261 (45%), Gaps = 14/261 (5%)
Query: 253 SVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSL 312
+V +K++ S PD+ VG ++ K GK ++AH K + S IS L
Sbjct: 3 TVYDKLVRIYS-PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDI-STFNIYISGL 60
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEG 368
C+ D F G RK+ P +++++ LC + A+ L +MI G
Sbjct: 61 CRASRIG----DAQTVFDG-MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAG 115
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P +N+++ + K G + A+++ RG PDV TY L++G+ +++EA
Sbjct: 116 YSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQ 175
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
IL VTY++L+ G CK D A L+ D G PNV Y+ LI L
Sbjct: 176 RILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGL 232
Query: 489 CLKALDWRTAEKLLEDMRLKG 509
C + +A +LLE M L G
Sbjct: 233 CRELRRLESARQLLEKMVLNG 253
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 115/263 (43%), Gaps = 2/263 (0%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
K G+ + A + + GCV + ++ I L + K D A + M G P+
Sbjct: 338 LCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPN 397
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC--QEDETVKLALD 324
+ +I C+ GK K+A + ++ + P L+ LC +++ +K A+
Sbjct: 398 AISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAIT 457
Query: 325 MLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
+ D + R + +S++I L + + A+ LL M ++G P +NS+IS
Sbjct: 458 LFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLC 517
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV 444
+ A+E+ M +G PD TY ++S +++A + + + + +
Sbjct: 518 GLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSG 577
Query: 445 TYHTLIRGYCKLEEFDCALKLLN 467
Y +LI G C + D ALKLL
Sbjct: 578 MYFSLIDGLCAVARVDEALKLLQ 600
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 70/166 (42%), Gaps = 10/166 (6%)
Query: 160 VVDALLKAICSSVGK-KEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFE 218
+VD L KA G+ KE L+D + E G V V + LI K GK A
Sbjct: 439 LVDGLCKA--RQEGRIKEAITLFDAMIEKGR----VPDVVTYSALIDGLGKAGKLDDARR 492
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+ GC+ N TY I L D A + M+E G +PD+ G IIS C
Sbjct: 493 LLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALC 552
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC---QEDETVKL 321
K +A ++ + E + P + LI LC + DE +KL
Sbjct: 553 KQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKL 598
>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 825
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 158/363 (43%), Gaps = 38/363 (10%)
Query: 190 KEKGVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
K KGVL TVE LI F K G+ +A ++ + G N + + I+A + +
Sbjct: 267 KMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLV 326
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
A + +M E G PD +I++ CKGG+ +EA + A+E+ + P + L
Sbjct: 327 TEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPL 386
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRS--------------------- 347
+ + C++ + VK A ML + K + + + I
Sbjct: 387 MHAYCKKGDYVK-ASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKG 445
Query: 348 --------------LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
LC+ + K LLS+M+ P VF ++I + + G++ A+
Sbjct: 446 VFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAI 505
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
++ K++ +G+ P + Y ++ G+ G+M +A LNE H TY T+I GY
Sbjct: 506 KIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGY 565
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
K + ALK+ +M +PNV Y LI C KA D AEK+ M+ L N
Sbjct: 566 VKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKA-DMIRAEKVFSGMKSFDLVPN 624
Query: 514 GIT 516
+T
Sbjct: 625 VVT 627
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 158/353 (44%), Gaps = 15/353 (4%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+ N +I K G+ + A E+ K + G + N+ +Y + A ++ + A +
Sbjct: 345 ITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLF 404
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
++ E G D G I G+ A +V EK ++P + L+S LC++
Sbjct: 405 RIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKG 464
Query: 317 E--TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
+KL L + D + + Y F+++I R ++ A + +I +G PG
Sbjct: 465 RIPAMKLLLSEMLDRNVQPDVYV---FATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIV 521
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
+N++I + K G MT A+ L M S PD YTY+ ++ GY M A ++ +
Sbjct: 522 GYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQM 581
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
K+ + + +TY +LI G+CK + A K+ + MK + PNV Y L+ KA
Sbjct: 582 MKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGF-FKAGK 640
Query: 495 WRTAEKLLEDMRLKG-------LH--LNGITRALIRAVKELEEDAIENGEALV 538
A + E M + G H +NG+T V E+D+ EN +L+
Sbjct: 641 PERATSIFELMLMNGCLPNDATFHYLINGLTNTATSPVLIEEKDSKENERSLI 693
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 163/369 (44%), Gaps = 12/369 (3%)
Query: 152 FFKWVTSGVVDALLKAICSS-----VGKKEVYALWDIVKEIGEKEKGVLTVEILNELIAL 206
FF W ++ L + S + V+ ++V E + + T E + LI
Sbjct: 80 FFDWASTRPFSCSLDGVAHSSLLKLLASYRVFPEIELVLENMKAQHLKPTREAFSALILA 139
Query: 207 FSKLGKGKAAFEVFNKFGD-YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET---- 261
+++ G A ++F+ + + C + L + D A + +KM++T
Sbjct: 140 YAESGSLDRALQLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVALQLYDKMLQTDDGT 199
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
G++ D+ ++ C GK +E + K P +I C++ + ++
Sbjct: 200 GAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGD-LQC 258
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A L++ + ++ + ++I C+ + LL++M + G VFN+VI
Sbjct: 259 ATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVID 318
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
A K G +T A EML+ M G PD+ TY +++ GG++EEA E+L +AK+
Sbjct: 319 AEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLP 378
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+ +Y L+ YCK ++ A +L + ++G + ++ Y I + + A + A +
Sbjct: 379 NKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVV-AGEIDVALMV 437
Query: 502 LEDMRLKGL 510
E M KG+
Sbjct: 438 REKMMEKGV 446
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 123/303 (40%), Gaps = 19/303 (6%)
Query: 201 NELIALFSKLGKGKAAFEVFNKF----GDYGCVANQETYYFTIEALSR-------RKIFD 249
N L+ K GK A ++++K G V + T ++ L R++
Sbjct: 170 NLLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIK 229
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
W C +P II +CK G + A + K + P LI
Sbjct: 230 HRWGKC-------CVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTVETYGALI 282
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
+ C+ E + +L + + +K F++VI + + V A +L +M G
Sbjct: 283 NGFCKAGE-FEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGC 341
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
P +N +I+ K G + A E+L+ + RGL P+ ++YT LM Y G +A
Sbjct: 342 GPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASG 401
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+L + + V+Y I G E D AL + +M + GV P+ YN L+ LC
Sbjct: 402 MLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLC 461
Query: 490 LKA 492
K
Sbjct: 462 KKG 464
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/394 (21%), Positives = 139/394 (35%), Gaps = 86/394 (21%)
Query: 190 KEKGVLTVEI-LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
KE+G+L + L+ + K G A + + + G ++ +Y I +
Sbjct: 372 KERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEI 431
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
D A V EKM+E G PD++ ++S CK G+ ++ + ++ + P V A L
Sbjct: 432 DVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATL 491
Query: 309 ISSLCQE---DETVKL-------------------------------ALDMLDDFSGEAR 334
I + DE +K+ AL L++ +
Sbjct: 492 IDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHH 551
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
+S+VI + D+ A + +M+ P + S+I+ + K DM A +
Sbjct: 552 APDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEK 611
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY- 453
+ M+S L P+V TYT L+ G+ G+ E A I N + T+H LI G
Sbjct: 612 VFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGLT 671
Query: 454 ------------------------------------------------CKLEEFDCALKL 465
CK D A L
Sbjct: 672 NTATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQLL 731
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCL--KALDWRT 497
L +M G + + L+ LC K+ +WR
Sbjct: 732 LTKMLTKGFLIDSVCFTALLHGLCHKGKSKEWRN 765
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 175/407 (42%), Gaps = 25/407 (6%)
Query: 117 GYLESSLDSFE----LDLHEDFVLKVLETPLVLGENLVCF---FKWVTSGVVDALLKAIC 169
G + S LDS+E D D +L L+ + + V + + G LL+++
Sbjct: 110 GVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVY 169
Query: 170 SSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCV 229
S +G + + D+V N L+ + + + A + + G
Sbjct: 170 SEMGARGIKP--DVVT--------------FNTLMKALCRAHQVRTAVIMLEEMSSRGVA 213
Query: 230 ANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVV 289
++ T+ ++ + A V +M+E G V +I+ +CK G+ ++A
Sbjct: 214 PDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGY 273
Query: 290 YTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLC 349
P Q ++ LCQ D V AL ++D E + ++ V+ LC
Sbjct: 274 IQQEIADGFEPDQITYNTFVNGLCQNDH-VGHALKVMDVMVQEGHDPDVFTYNIVVNCLC 332
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
+ + AK +L++M+ G P FN++I+A + A+++ + + +G+ PDVY
Sbjct: 333 KNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVY 392
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
T+ L++ G A + E K + VTY+TLI C L + AL LL +M
Sbjct: 393 TFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM 452
Query: 470 KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ G + YN +I LC K + AE++ + M L+G+ N IT
Sbjct: 453 ESTGCPRSTITYNTIIDGLC-KKMRIEEAEEVFDQMDLQGISRNAIT 498
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 148/345 (42%), Gaps = 36/345 (10%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N ++ K G+ + A + N+ D GC+ + T+ I AL + A + ++
Sbjct: 325 NIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV 384
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD +I+ CK G A ++ + P + LI +LC + K
Sbjct: 385 KGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGK 444
Query: 321 LALDMLDD----------------FSGEARKYAIK-------------------PFSSVI 345
ALD+L D G +K I+ F+++I
Sbjct: 445 -ALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLI 503
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
LC+ K + A L+++MISEG P N +NS+++ Y K GD+ A ++L+ M + G +
Sbjct: 504 DGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFE 563
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
DV TY L++G G+ + A ++L + R +P Y+ +++ + AL L
Sbjct: 564 VDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSL 623
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
EM +VG P+ Y + + LC + A + +M KG
Sbjct: 624 FREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGF 668
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 175/407 (42%), Gaps = 25/407 (6%)
Query: 117 GYLESSLDSFE----LDLHEDFVLKVLETPLVLGENLVCF---FKWVTSGVVDALLKAIC 169
G + S LDS+E D D +L L+ + + V + + G LL+++
Sbjct: 110 GVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVY 169
Query: 170 SSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCV 229
S +G + + D+V N L+ + + + A + + G
Sbjct: 170 SEMGARGIKP--DVVT--------------FNTLMKALCRAHQVRTAVLMLEEMSSRGVA 213
Query: 230 ANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVV 289
++ T+ ++ + A V +M+E G V +I+ +CK G+ ++A
Sbjct: 214 PDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGY 273
Query: 290 YTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLC 349
P Q ++ LCQ D V AL ++D E + ++ V+ LC
Sbjct: 274 IQQEIADGFEPDQITYNTFVNGLCQNDH-VGHALKVMDVMVQEGHDPDVFTYNIVVNCLC 332
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
+ + AK +L++M+ G P FN++I+A + A+++ + + +G+ PDVY
Sbjct: 333 KNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVY 392
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
T+ L++ G A + E K + VTY+TLI C L + AL LL +M
Sbjct: 393 TFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM 452
Query: 470 KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ G + YN +I LC K + AE++ + M L+G+ N IT
Sbjct: 453 ESTGCPRSTITYNTIIDGLC-KKMRIEEAEEVFDQMDLQGISRNAIT 498
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 148/345 (42%), Gaps = 36/345 (10%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N ++ K G+ + A + N+ D GC+ + T+ I AL + A + ++
Sbjct: 325 NIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV 384
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD +I+ CK G A ++ + P + LI +LC + K
Sbjct: 385 KGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGK 444
Query: 321 LALDMLDD----------------FSGEARKYAIK-------------------PFSSVI 345
ALD+L D G +K I+ F+++I
Sbjct: 445 -ALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLI 503
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
LC+ K + A L+++MISEG P N +NS+++ Y K GD+ A ++L+ M + G +
Sbjct: 504 DGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFE 563
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
DV TY L++G G+ + A ++L + R +P Y+ +++ + AL L
Sbjct: 564 VDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSL 623
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
EM +VG P+ Y + + LC + A + +M KG
Sbjct: 624 FREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGF 668
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 162/345 (46%), Gaps = 11/345 (3%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+L L+ K GK A E++ + + G AN T I L + A + +KM
Sbjct: 525 LLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKM 584
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+E G + D +IS CK GK +E + ++ + P LI +C+ +
Sbjct: 585 LERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGK- 643
Query: 319 VKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
LD + E + + P + +I C+ + + L ++++++ +
Sbjct: 644 ----LDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSV 699
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
V+N++I AY + G+ A ++ MRS+G+ P TY+ L+ G N G+ME+A +++E
Sbjct: 700 VYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEM 759
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
+K + V Y LI GYCKL + D + +L EM + PN Y +I K+ D
Sbjct: 760 RKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYS-KSGD 818
Query: 495 WRTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIENGEALVE 539
+TA KLL +M KG+ + +T ++ +E IE G+ L E
Sbjct: 819 MKTAAKLLHEMVGKGIVPDTVTYNVLTN-GFCKEGKIEEGKLLAE 862
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 145/331 (43%), Gaps = 5/331 (1%)
Query: 159 GVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFE 218
G++ L+ +C + LW + E G V T N LI K G + A
Sbjct: 524 GLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTT----NALIHGLCKTGNMQEAVR 579
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+ K + G V ++ TY I + + + + +M++ G PD+ +I C
Sbjct: 580 LLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMC 639
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
+ GK EA ++ + + + P +I C+ D+ ++ + + + +
Sbjct: 640 RIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADK-IEEGEKLFTELLTQNLELNS 698
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
++++IR+ CR + A L M S+G PP A ++S+I G M A ++
Sbjct: 699 VVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDE 758
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
MR GL P+V YT L+ GY GQM++ +L E + +TY +I GY K +
Sbjct: 759 MRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGD 818
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A KLL+EM G+ P+ YN L C
Sbjct: 819 MKTAAKLLHEMVGKGIVPDTVTYNVLTNGFC 849
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 141/310 (45%), Gaps = 10/310 (3%)
Query: 184 VKEIGEKEKGVLTVEILNELIAL-FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEAL 242
+ E+GE V V++L + F +G + A VF + G +T F + +L
Sbjct: 231 LNEVGESGVAVAAVDLLIHVYCTQFRNVGF-RNAIGVFRFLANKGVFPTVKTCTFLLSSL 289
Query: 243 SRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQ 302
+ + ++ V E M G PD I+ FCKGGK ++A ++ + + P
Sbjct: 290 VKANELEKSYWVFETM-RQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNV 348
Query: 303 SVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
LI LC+ DE + M+ D + +S +I L +++ + A +
Sbjct: 349 VTYNNLIHGLCKHGNLDEAFRFKEKMVKD----GVNATLITYSVLINGLMKLEKFNEANS 404
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
+L + + +G P V+N++I Y K G++ A+ + M S+G+ P+ T ++ G+
Sbjct: 405 VLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFC 464
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
GQME+A IL E ++P + T+I C F+ AL+ L EM ++PN
Sbjct: 465 KIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDG 524
Query: 480 EYNKLIQSLC 489
L+ LC
Sbjct: 525 LLTTLVGGLC 534
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 150/350 (42%), Gaps = 29/350 (8%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI K G AF K G A TY I L + + F+ A SV ++ +E
Sbjct: 352 NNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLE 411
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC---QEDE 317
G P+ +I +CK G +A + K + P + +I C Q ++
Sbjct: 412 KGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQ 471
Query: 318 TVKLALDMLDDFSGEARKYAIKP--FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ +ML +R ++I P F+++I LC A L +M+ P + +
Sbjct: 472 AECILEEML------SRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGL 525
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+++ K G + A+E+ + +G ++ T L+ G G M+EA +L +
Sbjct: 526 LTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKML 585
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC-LKALD 494
+ L +TY+TLI G CK + + KL EM G++P+ YN LI +C + LD
Sbjct: 586 ERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLD 645
Query: 495 -----WR--TAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIENGEAL 537
W + L+ ++ G+ ++G +A D IE GE L
Sbjct: 646 EAVNLWNECKSRDLVPNVYTYGVMIDGYCKA----------DKIEEGEKL 685
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 4/133 (3%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA 216
T+ +L+ +C+ ++ L D ++ KE + V LI + KLG+
Sbjct: 732 TTATYSSLIHGMCNIGRMEDAKCLIDEMR----KEGLLPNVVCYTALIGGYCKLGQMDKV 787
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
V + Y N+ TY I+ S+ A + +M+ G +PD+ + +
Sbjct: 788 VNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNG 847
Query: 277 FCKGGKAKEAHVV 289
FCK GK +E ++
Sbjct: 848 FCKEGKIEEGKLL 860
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 175/407 (42%), Gaps = 25/407 (6%)
Query: 117 GYLESSLDSFE----LDLHEDFVLKVLETPLVLGENLVCF---FKWVTSGVVDALLKAIC 169
G + S LDS+E D D +L L+ + + V + + G LL+++
Sbjct: 18 GVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVY 77
Query: 170 SSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCV 229
S +G + + D+V N L+ + + + A + + G
Sbjct: 78 SEMGARGIKP--DVVT--------------FNTLMKALCRAHQVRTAVLMLEEMSSRGVA 121
Query: 230 ANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVV 289
++ T+ ++ + A V +M+E G V +I+ +CK G+ ++A
Sbjct: 122 PDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGY 181
Query: 290 YTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLC 349
P Q ++ LCQ D V AL ++D E + ++ V+ LC
Sbjct: 182 IQQEIADGFEPDQITYNTFVNGLCQNDH-VGHALKVMDVMVQEGHDPDVFTYNIVVNCLC 240
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
+ + AK +L++M+ G P FN++I+A + A+++ + + +G+ PDVY
Sbjct: 241 KNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVY 300
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
T+ L++ G A + E K + VTY+TLI C L + AL LL +M
Sbjct: 301 TFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM 360
Query: 470 KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ G + YN +I LC K + AE++ + M L+G+ N IT
Sbjct: 361 ESTGCPRSTITYNTIIDGLC-KKMRIEEAEEVFDQMDLQGISRNAIT 406
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 148/345 (42%), Gaps = 36/345 (10%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N ++ K G+ + A + N+ D GC+ + T+ I AL + A + ++
Sbjct: 233 NIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV 292
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD +I+ CK G A ++ + P + LI +LC + K
Sbjct: 293 KGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGK 352
Query: 321 LALDMLDD----------------FSGEARKYAIK-------------------PFSSVI 345
ALD+L D G +K I+ F+++I
Sbjct: 353 -ALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLI 411
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
LC+ K + A L+++MISEG P N +NS+++ Y K GD+ A ++L+ M + G +
Sbjct: 412 DGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFE 471
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
DV TY L++G G+ + A ++L + R +P Y+ +++ + AL L
Sbjct: 472 VDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSL 531
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
EM +VG P+ Y + + LC + A + +M KG
Sbjct: 532 FREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGF 576
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 175/407 (42%), Gaps = 25/407 (6%)
Query: 117 GYLESSLDSFE----LDLHEDFVLKVLETPLVLGENLVCF---FKWVTSGVVDALLKAIC 169
G + S LDS+E D D +L L+ + + V + + G LL+++
Sbjct: 110 GVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVY 169
Query: 170 SSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCV 229
S +G + + D+V N L+ + + + A + + G
Sbjct: 170 SEMGARGIKP--DVVT--------------FNTLMKALCRAHQVRTAVLMLEEMSSRGVA 213
Query: 230 ANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVV 289
++ T+ ++ + A V +M+E G V +I+ +CK G+ ++A
Sbjct: 214 PDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGY 273
Query: 290 YTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLC 349
P Q ++ LCQ D V AL ++D E + ++ V+ LC
Sbjct: 274 IQQEIADGFEPDQITYNTFVNGLCQNDH-VGHALKVMDVMVQEGHDPDVFTYNIVVNCLC 332
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
+ + AK +L++M+ G P FN++I+A + A+++ + + +G+ PDVY
Sbjct: 333 KNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVY 392
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
T+ L++ G A + E K + VTY+TLI C L + AL LL +M
Sbjct: 393 TFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM 452
Query: 470 KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ G + YN +I LC K + AE++ + M L+G+ N IT
Sbjct: 453 ESTGCPRSTITYNTIIDGLC-KKMRIEEAEEVFDQMDLQGISRNAIT 498
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 148/345 (42%), Gaps = 36/345 (10%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N ++ K G+ + A + N+ D GC+ + T+ I AL + A + ++
Sbjct: 325 NIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV 384
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD +I+ CK G A ++ + P + LI +LC + K
Sbjct: 385 KGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGK 444
Query: 321 LALDMLDD----------------FSGEARKYAIK-------------------PFSSVI 345
ALD+L D G +K I+ F+++I
Sbjct: 445 -ALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLI 503
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
LC+ K + A L+++MISEG P N +NS+++ Y K GD+ A ++L+ M + G +
Sbjct: 504 DGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFE 563
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
DV TY L++G G+ + A ++L + R +P Y+ +++ + AL L
Sbjct: 564 VDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSL 623
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
EM +VG P+ Y + + LC + A + +M KG
Sbjct: 624 FREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGF 668
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 141/268 (52%), Gaps = 4/268 (1%)
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
+++SV K+++ G PD+ +I C G+ +A + + Q LI
Sbjct: 111 FSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLI 170
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
+ LC+ ET K A+ +L G+ + + +S++I S+C+ K V+ A L +M+S+
Sbjct: 171 NGLCRVGET-KAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRI 229
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
P ++S+IS + G + A+++ M S + P+VYT++ L+ G+ G++ EA
Sbjct: 230 SPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKN 289
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+L K + +L VTY++L+ GYC +++ + A L N M GV P+V Y+ +I C
Sbjct: 290 VLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFC 349
Query: 490 -LKALDWRTAEKLLEDMRLKGLHLNGIT 516
+K +D A KL E+M K + N +T
Sbjct: 350 KIKMVD--EAMKLFEEMHCKQIFPNVVT 375
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 149/316 (47%), Gaps = 2/316 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+ FS+LG K +F VF K G + T+ I+ L + A +K++
Sbjct: 97 NLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVA 156
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G D G +I+ C+ G+ K A + K + P + + +I S+C+ D+ V
Sbjct: 157 QGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCK-DKLVN 215
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A D+ + + + +SS+I C + + A L ++MIS+ P F+ +I
Sbjct: 216 DAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILI 275
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ K G + A +L +M + +K DV TY LM GY Q+ +A + N +
Sbjct: 276 DGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVT 335
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+Y +I G+CK++ D A+KL EM + PNV YN L+ LC K+ A +
Sbjct: 336 PDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLC-KSGRTSCALE 394
Query: 501 LLEDMRLKGLHLNGIT 516
L+++M +G N IT
Sbjct: 395 LVDEMHDRGQPSNIIT 410
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 154/317 (48%), Gaps = 8/317 (2%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI ++G+ KAA ++ + N Y I+++ + K+ + A+ + +M+
Sbjct: 169 LINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKR 228
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD +IS FC GK K A ++ + P + LI C+E + V+ A
Sbjct: 229 ISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGK-VREA 287
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++L + K + ++S++ C +K V+ AK+L + M G P ++ +I+
Sbjct: 288 KNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMING 347
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ K + AM++ + M + + P+V TY L+ G G+ A E+++E H R
Sbjct: 348 FCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEM---HDRGQ 404
Query: 443 P---VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
P +TY++++ CK D A+ LL ++K+ G+QP++ Y LI LC K A+
Sbjct: 405 PSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLC-KVGRLDDAQ 463
Query: 500 KLLEDMRLKGLHLNGIT 516
K+ ED+ +KG N T
Sbjct: 464 KVFEDLLVKGYSPNIYT 480
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 125/267 (46%), Gaps = 1/267 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F K GK + A V + TY ++ K + A S+ M + G
Sbjct: 274 LIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRG 333
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD +I+ FCK EA ++ K+++P L+ LC+ T A
Sbjct: 334 VTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRT-SCA 392
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
L+++D+ + I ++S++ ++C+ V A LL+K+ +G P + +I+
Sbjct: 393 LELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLING 452
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
K G + A ++ + + +G P++YTYT L++G+ N G +E +L++ K N +
Sbjct: 453 LCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPN 512
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEM 469
+TY LI + +E D A KLL EM
Sbjct: 513 AITYEILIHSLFEKDENDKAEKLLREM 539
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 74/149 (49%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F ++ SL + K A +L +M G P N +++ +S+ G + + + +
Sbjct: 61 FGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKIL 120
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+G PD T+T L+ G G++ +A ++ +L V+Y TLI G C++ E
Sbjct: 121 KKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETK 180
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A++LL + V+PNV Y+ +I S+C
Sbjct: 181 AAVQLLRRVDGKLVRPNVVMYSTIIDSMC 209
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 2/145 (1%)
Query: 360 LLSKMISEGPPPGNAV-FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
L ++++ + P A+ F ++ + KA A+ + + M G+KPD T LM+ +
Sbjct: 44 LFNRLLHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCF 103
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
+ G ++ + + + K VT+ LI+G C E AL +++ G Q +
Sbjct: 104 SQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQ 163
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLE 503
Y LI LC + + + A +LL
Sbjct: 164 VSYGTLINGLC-RVGETKAAVQLLR 187
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 165/380 (43%), Gaps = 24/380 (6%)
Query: 138 VLETPLVLGE--------NLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGE 189
VLE L+LG+ NL + W+ + +C + E L D G
Sbjct: 202 VLEAGLLLGKVIQRGMSINLFTYNIWI---------RGLCEAGRLPEAVRLVD-----GM 247
Query: 190 KEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
+ V V N LI K + A + + GC+ + TY I+ + +
Sbjct: 248 RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQ 307
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A + + + G +PD +I+ C G + A ++ A+ K + P V L+
Sbjct: 308 EATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLV 367
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
LC + + AL ++++ + E I+ ++ VI LC+M ++ A +++ I +G
Sbjct: 368 KGLCLQGLILH-ALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGY 426
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
P FN++I Y K + A+++++ M G+ PD TY +++G G++ E E
Sbjct: 427 LPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNE 486
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
E +P+TY+ LI +C+ + + A K++ +M G+ P+ +N LI C
Sbjct: 487 TFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFC 546
Query: 490 LKALDWRTAEKLLEDMRLKG 509
D A L + + KG
Sbjct: 547 RNG-DLEGAYLLFQKLEEKG 565
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 140/344 (40%), Gaps = 44/344 (12%)
Query: 204 IALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGS 263
I +++ G+ + A + F + + C Y ++AL D A V +M+ G
Sbjct: 57 IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 116
Query: 264 LPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKL 321
PD + FC + H+ L R P + VA+ ++ L T
Sbjct: 117 SPDLHTHTIRLRSFCLTAR---PHIALRLLRA---LPHRGAVAYCTVVCGLYAHGHTHD- 169
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG------------- 368
A + D + F+ V+ +LC+ DV A LL K+I G
Sbjct: 170 ARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIR 229
Query: 369 ---------------------PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
P +N++I K AM L+ M ++G PD
Sbjct: 230 GLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPD 289
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
+TY ++ GY ++EA E+L +A VTY +LI G C + + AL+L N
Sbjct: 290 DFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFN 349
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH 511
E + G++P++ YN L++ LCL+ L A +++ +M +G H
Sbjct: 350 EAQAKGIKPDIVVYNSLVKGLCLQGLILH-ALQVMNEMAEEGCH 392
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 123/297 (41%), Gaps = 9/297 (3%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G + A E+FN+ G + Y ++ L + + A V +M E G PD +
Sbjct: 339 GDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTY 398
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
+I+ CK G +A VV A K P LI C+ +L LD
Sbjct: 399 NIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCK-----RLKLDSALQLV 453
Query: 331 GEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
+Y I P ++SV+ LC+ V+ +MI +G P +N +I + ++
Sbjct: 454 ERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRS 513
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
M A +++ M GL PD ++ L+ G+ G +E A + + ++ + T+
Sbjct: 514 NKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTF 573
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
+TLI + A K+ +EM G + + Y LI C A R L+E
Sbjct: 574 NTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVE 630
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 140/319 (43%), Gaps = 5/319 (1%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
V ++L+K +C + ++AL ++ E+ E E ++ N +I K+G A V
Sbjct: 362 VYNSLVKGLC--LQGLILHAL-QVMNEMAE-EGCHPDIQTYNIVINGLCKMGNISDATVV 417
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
N G + + T+ I+ +R D A + E+M E G PD+ +++ CK
Sbjct: 418 MNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCK 477
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
GK E + + K +P LI + C+ ++ ++ A ++ S E
Sbjct: 478 AGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNK-MEEASKVIVKMSQEGLHPDAV 536
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
F+++I CR D+ GA L K+ +G FN++I A+S +M A ++ M
Sbjct: 537 SFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEM 596
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
S+G + D YTY L+ G ++ A L E K S T+ +I
Sbjct: 597 LSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRV 656
Query: 460 DCALKLLNEMKDVGVQPNV 478
A+ +++ M +GV P V
Sbjct: 657 FQAVGIIHIMVKIGVVPEV 675
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 82/191 (42%), Gaps = 7/191 (3%)
Query: 337 AIKP-FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
I P + + IR+ R + A +M PP +N+++ A A A ++
Sbjct: 48 TIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKV 107
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
M + G+ PD++T+T + + + A +L V Y T++ G
Sbjct: 108 YVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHR----GAVAYCTVVCGLYA 163
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
A +L ++M V PN+ +NK++ +LC + D A LL + +G+ +N
Sbjct: 164 HGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRG-DVLEAGLLLGKVIQRGMSINLF 222
Query: 516 TRAL-IRAVKE 525
T + IR + E
Sbjct: 223 TYNIWIRGLCE 233
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 127/252 (50%), Gaps = 1/252 (0%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
+E L +R + A ++ +++ E G P+ +I CKG EA +++ + +
Sbjct: 339 VEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGL 398
Query: 299 YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
P + LI C+ + + AL L + K ++ P++S+I C+ D+ A+
Sbjct: 399 CPNDVTYSILIDMFCRRGK-LDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAE 457
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+L+++MI++ P + S++ Y G + A+ + M +G+ P +YT+T L+SG
Sbjct: 458 SLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGL 517
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G + +A ++ E + + + + VTY+ +I GYC+ A + LNEM + G+ P+
Sbjct: 518 FRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDT 577
Query: 479 DEYNKLIQSLCL 490
Y LI LCL
Sbjct: 578 YSYRPLIHGLCL 589
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 139/309 (44%), Gaps = 5/309 (1%)
Query: 205 ALFSKLGKGKAAFE---VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET 261
AL L KG+ E +F++ G G N TY I+ RR D A S +MI+
Sbjct: 372 ALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDM 431
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
G P +I+ CK G A + KK+ P L+ C + + K
Sbjct: 432 GLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINK- 490
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
AL + + +G+ +I F++++ L R + A L ++M P +N +I
Sbjct: 491 ALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIE 550
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
Y + G+M+ A E L M +G+ PD Y+Y L+ G GQ EA ++ K + L
Sbjct: 551 GYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCEL 610
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+ + Y L+ G+C+ + + AL + +M GV ++ Y LI LK D + L
Sbjct: 611 NEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDG-SLKHKDRKVFLGL 669
Query: 502 LEDMRLKGL 510
L++M +GL
Sbjct: 670 LKEMHDRGL 678
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 130/276 (47%), Gaps = 7/276 (2%)
Query: 246 KIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREK-KMYPPQSV 304
++FD +S EK L S +I + + + + +V+ + K + P
Sbjct: 139 EVFDALFSCYEKC----KLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRT 194
Query: 305 VAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM 364
++ L+ L + LA+++ DD + + ++ VIRSLC +KD+ AK ++ +M
Sbjct: 195 LSALLHGLVKFRH-FGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQM 253
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
+ G +N +I K + A+ + K + + LKPDV TY L+ G +
Sbjct: 254 EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEF 313
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
E E+++E + S +L+ G K + + AL L+ + + GV PN+ YN L
Sbjct: 314 EVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNAL 373
Query: 485 IQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
I SLC K ++ AE L + M GL N +T +++
Sbjct: 374 IDSLC-KGRNFDEAELLFDRMGKIGLCPNDVTYSIL 408
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 109/266 (40%), Gaps = 36/266 (13%)
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
K + + D G + Y I+A S+ F A+ + + MI G +P+ +
Sbjct: 664 KVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAV 723
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEA 333
I+ CK G EA ++ + KM P SV T LD+L G+
Sbjct: 724 INGLCKAGFVNEAEILCS-----KMRPGNSV---------PNQVTYGCFLDILTKGVGDM 769
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
+K ++H A I +G A +N +I + + G M A
Sbjct: 770 KKAV---------------ELHNA-------ILKGLLANTATYNMLIRGFCRQGRMEEAS 807
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
E++ M G+ PD TYT ++S +++A E+ N + R V Y+TLI G
Sbjct: 808 ELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGC 867
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVD 479
C E A +L NEM G++PN +
Sbjct: 868 CVAGEMGKATELRNEMLRQGLKPNTE 893
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 145/345 (42%), Gaps = 13/345 (3%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V L+ L+ K A E+F+ + G + Y I +L K A +
Sbjct: 192 VRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIV 251
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M TG + +I CK K EA + K++ P L+ LC+
Sbjct: 252 QMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQ 311
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
E ++ L+M+D+ + SS++ L + V A L+ ++ G P V+
Sbjct: 312 E-FEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVY 370
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N++I + K + A + M GL P+ TY+ L+ + G+++ A L E
Sbjct: 371 NALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMID 430
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ S Y++LI G+CK + A L+ EM + ++P V Y L+ C K
Sbjct: 431 MGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKG-KIN 489
Query: 497 TAEKLLEDMRLKGL---------HLNGITRA-LIR-AVKELEEDA 530
A +L +M KG+ L+G+ RA LIR AVK E A
Sbjct: 490 KALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMA 534
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 126/290 (43%), Gaps = 10/290 (3%)
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH 287
C N+ Y + R + A SVC+ M G D G +I K K+
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLID---GSLKHKDRK 664
Query: 288 VVYTLARE---KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSV 344
V L +E + + P + +I + + + K A + D E +++V
Sbjct: 665 VFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGD-FKEAFGIWDLMINEGCVPNEVTYTAV 723
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA-GDMTPAMEMLKLMRSRG 403
I LC+ V+ A+ L SKM P + + +K GDM A+E+ + +G
Sbjct: 724 INGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAIL-KG 782
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
L + TY L+ G+ G+MEEA E++ + +TY T+I C+ + A+
Sbjct: 783 LLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAI 842
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
+L N M + G++P+ YN LI C+ A + A +L +M +GL N
Sbjct: 843 ELWNSMTEKGIRPDRVAYNTLIHGCCV-AGEMGKATELRNEMLRQGLKPN 891
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 3/213 (1%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
I +I SK G K AF +++ + GCV N+ TY I L + + A +C KM
Sbjct: 684 IYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKM 743
Query: 259 IETGSLPDSEKVGKIISWFCKG-GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
S+P+ G + KG G K+A ++ A K + + LI C++
Sbjct: 744 RPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHN-AILKGLLANTATYNMLIRGFCRQGR 802
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
++ A +++ G+ ++++I LCR DV A L + M +G P +N
Sbjct: 803 -MEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYN 861
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
++I AG+M A E+ M +GLKP+ T
Sbjct: 862 TLIHGCCVAGEMGKATELRNEMLRQGLKPNTET 894
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 123/272 (45%)
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
+F+ D G VAN + I A ++R + D A V +M G PD +IS F
Sbjct: 425 NLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAF 484
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
C+ G+ +A ++ + P V LI C + VK + + S +
Sbjct: 485 CRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPN 544
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
I FSS+I SLC V A + + +I G P FNS+I Y G M A +L
Sbjct: 545 IVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLD 604
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M S G++PDV TY L+SGY G++++ + E + + VTY ++ G
Sbjct: 605 AMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAG 664
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A K+ +EM D G ++D Y L++ LC
Sbjct: 665 RTSAAKKMFHEMIDSGTAVDIDTYKILLKGLC 696
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 155/331 (46%), Gaps = 8/331 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEIL--NELIALFSKLGKGKAAFEV 219
+ ++K++C +E D+V+ + KE G + +++ N +I F K G+ A +
Sbjct: 231 NTVIKSLCGDSRSQEA---LDMVQRMA-KEGGRCSPDVVSFNTVIHGFFKQGEVSKACNL 286
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
N+ G + TY ++AL + + D A V +M++ G PD II +
Sbjct: 287 INEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSC 346
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
G KE+ ++ K + P +SSLC+ + K A ++ + + +
Sbjct: 347 SGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRS-KDAEEIFQYMTTKGHMPDLV 405
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
+S ++ L M +G FN +ISA++K G M AM + M
Sbjct: 406 SYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEM 465
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
+ +G++PDV TY+ L+S + G++ +A E ++ + V YH+LI G+C +
Sbjct: 466 QGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDL 525
Query: 460 DCALKLLNEMKDVGV-QPNVDEYNKLIQSLC 489
A +L++EM G+ +PN+ ++ +I SLC
Sbjct: 526 VKAKELVSEMMSKGIPRPNIVFFSSIIHSLC 556
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 139/331 (41%), Gaps = 43/331 (12%)
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL--PDSEKVGKIISW 276
+ ++ D GCV N +Y I++L A + ++M + G PD +I
Sbjct: 214 LLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHG 273
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED--ETVKLALDMLDDFSGEAR 334
F K G+ +A + +K + P ++ +LC+ + +L L + D E
Sbjct: 274 FFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPD 333
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
++++I + + KM S+G PG FNS +S+ K G A E
Sbjct: 334 GLT---YTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEE 390
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQ------------------------------- 423
+ + M ++G PD+ +Y+ L+ GYA G+
Sbjct: 391 IFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHA 450
Query: 424 ----MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
M+EA + E + R VTY TLI +C++ A++ ++M +G++PN
Sbjct: 451 KRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTV 510
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
Y+ LI C+ D A++L+ +M KG+
Sbjct: 511 VYHSLIHGFCMHG-DLVKAKELVSEMMSKGI 540
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 6/198 (3%)
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP--PP 371
+ DE V + L + D + +++VI+SLC A ++ +M EG P
Sbjct: 206 RTDEAVDVLLHRMSDLGCVPNAIS---YNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSP 262
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
FN+VI + K G+++ A ++ M +G++PDV TY ++ M++A +L
Sbjct: 263 DVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVL 322
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
+ +TY +I GY + + K+ +M G+ P + +N + SLC K
Sbjct: 323 RQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLC-K 381
Query: 492 ALDWRTAEKLLEDMRLKG 509
+ AE++ + M KG
Sbjct: 382 HGRSKDAEEIFQYMTTKG 399
Score = 38.5 bits (88), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 51/304 (16%), Positives = 111/304 (36%), Gaps = 40/304 (13%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+++ ++C+ + + ++++V IG++ T+ N LI + +GK + AF V +
Sbjct: 550 SIIHSLCNEGRVMDAHDVFNLVIHIGDRP----TIVTFNSLIDGYCLVGKMEKAFGVLDA 605
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + TY + + D + +M+ P + ++ G+
Sbjct: 606 MVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGR 665
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
A ++ + L+ LC+ D T + A+ + K+ I +
Sbjct: 666 TSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDE-AITLFHKLGAMDCKFDITILN 724
Query: 343 SVIRSLCRMK-----------------------------------DVHGAKTLLSKMISE 367
+VI +L +++ V A T+ S M
Sbjct: 725 TVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKS 784
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P + + N +I + GD+ A + + + + T + LMS +++ G+ E
Sbjct: 785 GCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGKHREQ 844
Query: 428 CEIL 431
+ L
Sbjct: 845 IKFL 848
>gi|414876286|tpg|DAA53417.1| TPA: hypothetical protein ZEAMMB73_373649 [Zea mays]
Length = 561
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 118/212 (55%), Gaps = 1/212 (0%)
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
K G+ +EA ++ ++ + P + A LI SLC+ ++ AL M D + + +
Sbjct: 63 KDGRYREAEKLFRGMADRGLDPNEVTYAILIHSLCKRG-MMEDALCMFDRMREKGIRMTV 121
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
P++S+I C+ + H A+ LL++M+++G P A ++ +I+ + GD+ AME+ +
Sbjct: 122 YPYNSLINGYCKHNNFHQARGLLNEMVAKGLTPSPASYSPLIAGLCRKGDLASAMELHRE 181
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M + +VYT+T L+SG+ G M+EA + ++ ++ + VT++ +I GYC++
Sbjct: 182 MTRNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESSLVPNEVTFNVMIEGYCRVGN 241
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
A +L ++M D G+ P+ Y LI +CL
Sbjct: 242 IRKAFQLYDQMLDRGLTPDNYTYRSLISVVCL 273
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 151/376 (40%), Gaps = 68/376 (18%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N I K G+ + A ++F D G N+ TY I +L +R + + A + ++M E
Sbjct: 55 NAWIDRLGKDGRYREAEKLFRGMADRGLDPNEVTYAILIHSLCKRGMMEDALCMFDRMRE 114
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G +I+ +CK +A + K + P + + LI+ LC++ +
Sbjct: 115 KGIRMTVYPYNSLINGYCKHNNFHQARGLLNEMVAKGLTPSPASYSPLIAGLCRKGDLAS 174
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A+++ + + A + F+++I C+ ++ A L KM+ P FN +I
Sbjct: 175 -AMELHREMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESSLVPNEVTFNVMI 233
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTY----------------------------- 411
Y + G++ A ++ M RGL PD YTY
Sbjct: 234 EGYCRVGNIRKAFQLYDQMLDRGLTPDNYTYRSLISVVCLTLGAMKAKEFVADLENNCAV 293
Query: 412 ------TGLMSGYANGGQMEEACE--------------------ILNE-----AKKNHSR 440
T LM G+ G E C+ + NE AK H+
Sbjct: 294 LNSFSLTALMHGFCKEGSAEILCKEMLAGHFLPNSYTYNCFLDYLANEGELEKAKVLHAA 353
Query: 441 L------SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
+ + VT++TLI+G+C + A+ L+ + + G P+ Y+ +I LC K D
Sbjct: 354 MLEGCLANTVTFNTLIKGFCMAGQIQGAIDLMQKNTESGFFPDCISYSTIINELC-KVGD 412
Query: 495 WRTAEKLLEDMRLKGL 510
A +L +M KGL
Sbjct: 413 TNKAFELWNEMLYKGL 428
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 143/342 (41%), Gaps = 28/342 (8%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
V LI+ F K G A +F+K + V N+ T+ IE R A+ +
Sbjct: 190 NVYTFTALISGFCKDGNMDEATRLFHKMMESSLVPNEVTFNVMIEGYCRVGNIRKAFQLY 249
Query: 256 EKMIETGSLPDSEKVGKIISWFCKG-GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
++M++ G PD+ +IS C G K V L + S+ A L+ C+
Sbjct: 250 DQMLDRGLTPDNYTYRSLISVVCLTLGAMKAKEFVADLENNCAVLNSFSLTA-LMHGFCK 308
Query: 315 EDETVKLALDML-DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
E L +ML F + Y + + L ++ AK L + M+ EG
Sbjct: 309 EGSAEILCKEMLAGHFLPNSYTY-----NCFLDYLANEGELEKAKVLHAAML-EGCLANT 362
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
FN++I + AG + A+++++ G PD +Y+ +++ G +A E+ NE
Sbjct: 363 VTFNTLIKGFCMAGQIQGAIDLMQKNTESGFFPDCISYSTIINELCKVGDTNKAFELWNE 422
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLE-EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
+ V Y LIR +C + EFD L + ++M V V P E ++ L +++
Sbjct: 423 MLYKGLKPDIVAYTILIR-WCNIHGEFDKGLGIYSDM--VTVLPEYPEVYNIVNKLRVES 479
Query: 493 -------LDWRTAEKLLEDMRLKGLH--------LNGITRAL 519
+ R + + DMR + LN +TR+L
Sbjct: 480 VVAVEGVIQPRPVDAINADMRTGTIEVVAHHVLVLNSVTRSL 521
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 124/284 (43%), Gaps = 5/284 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LIA + G +A E+ + N T+ I + D A + KM+E+
Sbjct: 162 LIAGLCRKGDLASAMELHREMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESS 221
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+P+ +I +C+ G ++A +Y ++ + P LIS +C +K A
Sbjct: 222 LVPNEVTFNVMIEGYCRVGNIRKAFQLYDQMLDRGLTPDNYTYRSLISVVCLTLGAMK-A 280
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+ + D ++++ C+ A+ L +M++ P + +N +
Sbjct: 281 KEFVADLENNCAVLNSFSLTALMHGFCKEGS---AEILCKEMLAGHFLPNSYTYNCFLDY 337
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ G++ A ++L G + T+ L+ G+ GQ++ A +++ + ++
Sbjct: 338 LANEGELEKA-KVLHAAMLEGCLANTVTFNTLIKGFCMAGQIQGAIDLMQKNTESGFFPD 396
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
++Y T+I CK+ + + A +L NEM G++P++ Y LI+
Sbjct: 397 CISYSTIINELCKVGDTNKAFELWNEMLYKGLKPDIVAYTILIR 440
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 151/356 (42%), Gaps = 6/356 (1%)
Query: 161 VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVF 220
+ +L+ C + +L D + EIG K V N +I K + AF+ F
Sbjct: 261 IGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIV----AYNAIIDSLCKTKRVNDAFDFF 316
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ G N TY + L + A + MI+ P+ ++ F K
Sbjct: 317 KEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKN 376
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
GK EA ++ + P + LI+ LC D + A M D + +
Sbjct: 377 GKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR-IDEANQMFDLMVSKGCLADVVS 435
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++++I C+ K V L +M G +N++I + +AGD+ A E M
Sbjct: 436 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 495
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G+ PD++TY L+ G + G++E+A I + +K L VTY T+IRG CK + +
Sbjct: 496 FFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVE 555
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A L + G++P++ Y ++ LC K L E L M+ +GL N T
Sbjct: 556 EAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL-LHEVEALYTKMKQEGLMKNDCT 610
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 135/286 (47%), Gaps = 2/286 (0%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
N T+ I L A ++ ++M+ G PD G +++ CK G A +
Sbjct: 799 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 858
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
+ K+ P + +I LC+ + + AL++ + + + + +SS+I LC
Sbjct: 859 NKMEQGKLEPGVLIYNTIIDGLCKY-KHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 917
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
A LLS MI P F+++I A+ K G + A ++ M R + P + T
Sbjct: 918 YGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVT 977
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
Y+ L++G+ +++EA ++ H VTY+TLI+G+CK + + +++ EM
Sbjct: 978 YSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMS 1037
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
G+ N YN LIQ L +A D A+++ ++M G+ N +T
Sbjct: 1038 QRGLVGNTVTYNILIQGL-FQAGDCDMAQEIFKEMVSDGVPPNIMT 1082
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 175/415 (42%), Gaps = 14/415 (3%)
Query: 112 QSSVDGYLESSLDSFELDLHEDFVLKVLETPLVLGENLV---CFFKWVTSGVVDALLKAI 168
Q V GY +++ +F +H F+ + L + +V C VT GVV + +
Sbjct: 790 QMFVTGYQPNTV-TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVV---VNGL 845
Query: 169 CSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGC 228
C + L + +++ G+ E GVL I N +I K A +F + G
Sbjct: 846 CKRGDTDLAFNLLNKMEQ-GKLEPGVL---IYNTIIDGLCKYKHMDDALNLFKEMETKGI 901
Query: 229 VANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHV 288
N TY I L + A + MIE PD +I F K GK EA
Sbjct: 902 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 961
Query: 289 VYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSL 348
+Y ++ + P + LI+ C D + A M + + + ++++I+
Sbjct: 962 LYDEMVKRSIDPSIVTYSSLINGFCMHDR-LDEAKQMFEFMVSKHCFPDVVTYNTLIKGF 1020
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
C+ K V + +M G +N +I +AGD A E+ K M S G+ P++
Sbjct: 1021 CKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 1080
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNE 468
TY L+ G G++E+A + +++ + TY+ +I G CK + + L
Sbjct: 1081 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN 1140
Query: 469 MKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN-GITRALIRA 522
+ GV+P+V YN +I C K A+ L ++M+ G N G LIRA
Sbjct: 1141 LSLKGVKPDVVAYNTMISGFCRKG-SKEEADALFKEMKEDGTLPNSGCYNTLIRA 1194
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 144/302 (47%), Gaps = 14/302 (4%)
Query: 233 ETYYFTIEALSRRKI----FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHV 288
+T Y E LSR + D A ++ +M+++ P + K++S K K V
Sbjct: 657 KTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKF---DV 713
Query: 289 VYTLARE-KKMYPPQS--VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVI 345
V +L + + + P + + LI+ C+ + + LAL +L + I SS++
Sbjct: 714 VISLGEQMQNLGIPHNHYTYSILINCFCRRSQ-LPLALAVLGKMMKLGYEPNIVTLSSLL 772
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
C K + A L+ +M G P FN++I + AM ++ M ++G +
Sbjct: 773 NGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQ 832
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
PD+ TY +++G G + A +LN+ ++ + Y+T+I G CK + D AL L
Sbjct: 833 PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 892
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRA-V 523
EM+ G++PNV Y+ LI LC W A +LL DM + ++ + T ALI A V
Sbjct: 893 FKEMETKGIRPNVVTYSSLISCLCNYG-RWSDASRLLSDMIERKINPDVFTFSALIDAFV 951
Query: 524 KE 525
KE
Sbjct: 952 KE 953
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 2/227 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI F K + + EVF + G V N TY I+ L + D A + ++M+
Sbjct: 1014 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 1073
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ ++ CK GK ++A VV+ + KM P +I +C+ + V+
Sbjct: 1074 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK-VE 1132
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
D+ + S + K + ++++I CR A L +M +G P + +N++I
Sbjct: 1133 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 1192
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
A + GD + E++K MRS G D T GL++ + G+++++
Sbjct: 1193 RARLRDGDREASAELIKEMRSCGFAGDAST-IGLVTNMLHDGRLDKS 1238
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 101/217 (46%), Gaps = 9/217 (4%)
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A+D+ D +I F+ ++ ++ ++K +L KM G FN VI+
Sbjct: 172 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 231
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
+ ++ A+ +L M G +PD T L++G+ ++ +A ++++ + +
Sbjct: 232 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 291
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
V Y+ +I CK + + A E++ G++PNV Y L+ LC + W A +L
Sbjct: 292 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLC-NSSRWSDAARL 350
Query: 502 LEDMRLKGLHLNGIT-RALIRAVKELEEDAIENGEAL 537
L DM K + N IT AL+ A ++NG+ L
Sbjct: 351 LSDMIKKKITPNVITYSALLDAF-------VKNGKVL 380
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 84/169 (49%), Gaps = 3/169 (1%)
Query: 350 RMKDV--HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
R++D+ + A L S M+ P P FN ++SA K + + K M G++ D
Sbjct: 163 RLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRND 222
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
+YT+ +++ + Q+ A IL + K VT +L+ G+C+ A+ L++
Sbjct: 223 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 282
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+M ++G +P++ YN +I SLC K A +++ KG+ N +T
Sbjct: 283 KMVEIGYKPDIVAYNAIIDSLC-KTKRVNDAFDFFKEIERKGIRPNVVT 330
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 1/165 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F+ VI C V A ++L KM+ G P S+++ + + ++ A+ ++ M
Sbjct: 226 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 285
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G KPD+ Y ++ ++ +A + E ++ R + VTY L+ G C +
Sbjct: 286 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 345
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
A +LL++M + PNV Y+ L+ + +K A++L E+M
Sbjct: 346 DAARLLSDMIKKKITPNVITYSALLDAF-VKNGKVLEAKELFEEM 389
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 154/330 (46%), Gaps = 13/330 (3%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+ + +C +E + + +KEIG + V N LI + G + AF+ +K
Sbjct: 266 SFISGMCKEGKLEEASGMLEKMKEIGLRPTAV----TYNTLIDGYCNKGNLEMAFDYRDK 321
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + TY I AL D A + ++M E G +PDS +I+ +C+ G
Sbjct: 322 MVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGN 381
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP-- 340
K+A ++ K + P + LI L + + DD + + I P
Sbjct: 382 VKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGR-----MKQADDLFEKIVRKGIFPDL 436
Query: 341 --FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
F+++I C ++ A +L +M P FN+++ + G + A E+++
Sbjct: 437 IMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEE 496
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M+SRG+KPD +Y L+SGY+ G M++A + +E + +TY+ LI+G CK EE
Sbjct: 497 MKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEE 556
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
D A +LL EM G+ PN + Y LI+ +
Sbjct: 557 GDHAEQLLKEMISKGITPNDNTYLSLIEGI 586
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 156/369 (42%), Gaps = 38/369 (10%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
+V N +I + K GK K A E G N TY I R + A +
Sbjct: 190 SVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIF 249
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+ M G PDS G IS CK GK +EA + +E + P LI C +
Sbjct: 250 DLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNK 309
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSL--------------------------- 348
+++A D D E + ++ +I +L
Sbjct: 310 G-NLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVT 368
Query: 349 --------CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
CR +V A TL +MIS+G P + S+I SK G M A ++ + +
Sbjct: 369 YNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIV 428
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+G+ PD+ + L+ G+ G M+ A +L E + VT++TL++G C+ + +
Sbjct: 429 RKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVE 488
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RAL 519
A +L+ EMK G++P+ YN LI + D + A ++ ++M G + +T AL
Sbjct: 489 AARELIEEMKSRGIKPDHISYNTLISGYSKRG-DMKDAFRVRDEMLSIGFNPTLLTYNAL 547
Query: 520 IRAVKELEE 528
I+ + + EE
Sbjct: 548 IQGLCKNEE 556
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 141/311 (45%), Gaps = 23/311 (7%)
Query: 218 EVFNKFGDYGCVANQETYYF---TIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
EVFN+ G V +TY I A K D A+ + M G +P ++
Sbjct: 104 EVFNELGVARGVLGIKTYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDML 163
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGE 332
S F K + ++A V+Y A +M SVV F +I+ LC+E + L +F G
Sbjct: 164 SLFLKSNRTEKAWVLY--AEMFRMRIKSSVVTFNIMINVLCKEGK-----LKKAKEFIGL 216
Query: 333 ARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD 388
IKP ++++I C V GA+ + M G P + + S IS K G
Sbjct: 217 MEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGK 276
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHT 448
+ A ML+ M+ GL+P TY L+ GY N G +E A + ++ + + TY+
Sbjct: 277 LEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNM 336
Query: 449 LIRGY---CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
LI CK++E D +K EM + G+ P+ YN LI C + + + A L ++M
Sbjct: 337 LIHALFLDCKMDEADGIIK---EMSEKGLVPDSVTYNILINGYC-RCGNVKKAFTLHDEM 392
Query: 506 RLKGLHLNGIT 516
KG+ +T
Sbjct: 393 ISKGIQPTRVT 403
>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Glycine max]
Length = 836
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 151/334 (45%), Gaps = 4/334 (1%)
Query: 156 VTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKA 215
V+ ++ L+ +C G E LW + + +T N L+ + G +
Sbjct: 463 VSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTS---NALLHGLCERGNMEE 519
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
FEV + + G + ++ +Y I + + A+ + E+M++ PD+ ++
Sbjct: 520 VFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMK 579
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
GK + H + A+E P A L+ C+ D ++ A+ + E +
Sbjct: 580 GLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADR-IEDAVKFFKNLDYEKVE 638
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+ ++ +I + CR+ +V A L M S G P A ++S+I G + A E+
Sbjct: 639 LSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEI 698
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
+ MR+ GL P+V+ YT L+ G+ GQM+ IL E N R + +TY +I GYCK
Sbjct: 699 FEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCK 758
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
L A +LLNEM G+ P+ YN L + C
Sbjct: 759 LGNMKEARELLNEMIRNGIAPDTVTYNALQKGYC 792
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 154/330 (46%), Gaps = 11/330 (3%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEI-LNELIALFSKLGKGKAAFEVF 220
+ALL +C +EV+ +++K++ EKG+L I N LI K GK + AF++
Sbjct: 505 NALLHGLCERGNMEEVF---EVLKQM--LEKGLLLDRISYNTLIFGCCKWGKIEEAFKLK 559
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ + TY F ++ L+ D + + E G +P+ ++ +CK
Sbjct: 560 EEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKA 619
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
+ ++A + +K+ V LI++ C+ + A + D
Sbjct: 620 DRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTE-AFKLRDAMKSRGILPTCAT 678
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+SS+I +C + V AK + +M +EG P + ++I + K G M +L M
Sbjct: 679 YSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMS 738
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
S G++P+ TYT ++ GY G M+EA E+LNE +N VTY+ L +GYCK E
Sbjct: 739 SNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTYNALQKGYCKERELT 798
Query: 461 CALKLLNEMKDVGVQPNVDE--YNKLIQSL 488
L+ + ++G+ P +E YN LI L
Sbjct: 799 VTLQ-SDHKSNIGL-PLEEEITYNTLIHKL 826
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 124/271 (45%), Gaps = 9/271 (3%)
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKI---ISWFCKGGK---AKEAHVVYTLAREKKMYPPQ 302
D + M+E D +++G++ + C K ++ A ++ + ++ ++P
Sbjct: 162 DRLREIASSMLELNQGSDEQRLGELDLLLHILCSQFKCLGSRCAFDIFVMFSKRGVFPCL 221
Query: 303 SVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLS 362
L+SSL + +E K + ++ D + + + F++ I + C+ V A L
Sbjct: 222 KTCNLLLSSLVKANELHK-SYEVFD-LACQGVAPDVFTFTTAINAFCKGGRVGDAVDLFC 279
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG 422
KM G P +N+VI K+G A+ M + P V TY L+SG
Sbjct: 280 KMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLE 339
Query: 423 QMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
EEA E+L E + V ++ LI GYC+ + AL++ +EM G++PN +N
Sbjct: 340 MFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFN 399
Query: 483 KLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
L+Q C ++ AE++L + GL +N
Sbjct: 400 TLLQGFC-RSNQMEQAEQVLVYILSSGLSVN 429
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 113/290 (38%), Gaps = 38/290 (13%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+L+ L + F LG + AF++F F G +T + +L + ++ V +
Sbjct: 189 LLHILCSQFKCLG-SRCAFDIFVMFSKRGVFPCLKTCNLLLSSLVKANELHKSYEVFDLA 247
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+ G PD I+ FCKGG+ +A
Sbjct: 248 CQ-GVAPDVFTFTTAINAFCKGGRVGDA-------------------------------- 274
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+D+ G + +++VI L + A +M+ P +
Sbjct: 275 ----VDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGV 330
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+IS K A E+L M S G P+ + L+ GY G M EA + +E
Sbjct: 331 LISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKG 390
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ + VT++TL++G+C+ + + A ++L + G+ N+D + +I L
Sbjct: 391 MKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRL 440
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 167/354 (47%), Gaps = 9/354 (2%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
L+ +C E Y L ++ K K + I+N L KL + + A E+ K
Sbjct: 51 LISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWL----CKLNRVEEARELIEKM 106
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
Y + TY +E L + K D A + E+M G PD+ ++S C+ K
Sbjct: 107 ARYA-PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKV 165
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
+EA +++ ++++ P LI+ LC+ ++ A ++ + +G+ +++
Sbjct: 166 EEARLLFEKMVKQRINPNVVTYNTLINGLCKAWR-IETAYELFKEMAGKGYVPTEVSYNT 224
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
+I C+ KD+ AK + KM+ P + ++I SK+G + A E+L M +G
Sbjct: 225 LIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKG 284
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
+ P+V TY+ L+ G+ +++EA ++L + + VTY+ L+ C+ ++ + A
Sbjct: 285 VTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAF 344
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLC-LKALDWRTAEKLLEDMRLKGLHLNGIT 516
KL M P V YN L+++LC K LD A +L +M KG + IT
Sbjct: 345 KLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDG--AHRLYAEMIAKGCPPDAIT 396
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 136/297 (45%), Gaps = 13/297 (4%)
Query: 237 FTIEALSRRKIFDW---------AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH 287
F +A++ I +W A + EKM PD+ G I+ CK + +A
Sbjct: 76 FKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAP-PDALTYGPIVERLCKTKRIDDAL 134
Query: 288 VVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRS 347
+ + P + F++S LCQE E V+ A + + + + ++++I
Sbjct: 135 ATVEEMATRGIKPDAFIYNFVLSGLCQE-EKVEEARLLFEKMVKQRINPNVVTYNTLING 193
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
LC+ + A L +M +G P +N++I + K D+ A ++ M P+
Sbjct: 194 LCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPN 253
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
V TYT L+ G + G+++ A E+L+ K + TY LI G+CK+ D A KLL
Sbjct: 254 VVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLE 313
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAV 523
+M G+ P V YN L+ SLC +A A KL M + H +T L+RA+
Sbjct: 314 QMVTQGIAPTVVTYNILLNSLC-RADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRAL 369
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 1/149 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F++V + + K + M+ G + + +IS K G+ A ++L MR
Sbjct: 13 FNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTMR 72
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+ K Y+ +++ ++EEA E++ E ++ +TY ++ CK + D
Sbjct: 73 LKRFKRKAIAYSTIINWLCKLNRVEEARELI-EKMARYAPPDALTYGPIVERLCKTKRID 131
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
AL + EM G++P+ YN ++ LC
Sbjct: 132 DALATVEEMATRGIKPDAFIYNFVLSGLC 160
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 4/141 (2%)
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
PG A FN+V ++KAG + E+ + M G Y L+S G +EA ++
Sbjct: 8 PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC- 489
L+ + + + Y T+I CKL + A +L+ +M P+ Y +++ LC
Sbjct: 68 LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVERLCK 126
Query: 490 LKALDWRTAEKLLEDMRLKGL 510
K +D A +E+M +G+
Sbjct: 127 TKRID--DALATVEEMATRGI 145
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M R + P T+ + G+A G++E+ E+ + L Y LI CK+
Sbjct: 1 MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
FD A KLL+ M+ + Y+ +I LC K A +L+E M
Sbjct: 61 FDEAYKLLHTMRLKRFKRKAIAYSTIINWLC-KLNRVEEARELIEKM 106
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 130/310 (41%), Gaps = 2/310 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
LN LI F L + AF V G + T+ I L A + +KM
Sbjct: 92 LNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMT 151
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
G PD G +I+ CK G A ++ P V + +I SLC+ D +
Sbjct: 152 GEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCK-DRQL 210
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
AL + D + +SS+I LC + A L MI P FN++
Sbjct: 211 TEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTL 270
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+ A K G + A ++ +M LKPDV TY LM G+ +M + + + +
Sbjct: 271 VDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGC 330
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
S ++Y TLI GYCK++ D A+ L EM G+ P+ YN LI LC R A
Sbjct: 331 VPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLC-HVGRLRDAI 389
Query: 500 KLLEDMRLKG 509
L +M + G
Sbjct: 390 ALFHEMVVYG 399
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 8/216 (3%)
Query: 294 REKKMYPPQSVVAF--LISSLCQEDE--TVKLALDMLDDFSGEARKYAIKPFSSVIRSLC 349
R +M PP S+V F L++S+ + TV +D F Y + + +I S C
Sbjct: 44 RMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTL---NILINSFC 100
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
+ + A ++L ++ G P A F ++I G + A+++ M G +PDV
Sbjct: 101 HLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVL 160
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
TY L++G G A L ++ + R + V Y T+I CK + AL L ++M
Sbjct: 161 TYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDM 220
Query: 470 KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
G+ PN Y+ LI LC+ W+ A +L M
Sbjct: 221 LAKGISPNNFTYSSLIHGLCILG-HWKEAIRLFYAM 255
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 139/342 (40%), Gaps = 40/342 (11%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ A+C + + + D++ + + + V+T L + L S++GK VF+
Sbjct: 268 NTLVDALCKEGMVVKAHYVVDVMIQ-SDLKPDVVTYNSLMDGHCLRSEMGK---TVNVFD 323
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
GCV + +Y I + +I D A + E+M + G +PD+ +I C G
Sbjct: 324 TMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVG 383
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ ++A ++ P L LC+ + A+ +L G I +
Sbjct: 384 RLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAE-AMVLLKVIEGTNLDPDIHIY 442
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
S V+ +CR AG++ A ++ + S
Sbjct: 443 SIVMDGMCR-----------------------------------AGELEAARDLFSKLSS 467
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
+GL PDV TYT +++G G + EA ++ E +N + TY+ + RG+ + E
Sbjct: 468 KGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLR 527
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
A++L EM G +V L++ L LD + L E
Sbjct: 528 AIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGLDQSVKQILCE 569
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 76/149 (51%), Gaps = 1/149 (0%)
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A +L ++M+ PPP F+ ++++ ++ + + + K M S G+ + YT L++
Sbjct: 38 ALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILIN 97
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
+ + ++ A +L + K + S T+ TLIRG C + AL+L ++M G QP
Sbjct: 98 SFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQP 157
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
+V Y LI LC K + TA + L M
Sbjct: 158 DVLTYGTLINGLC-KVGNTSTAIRFLRSM 185
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 159/353 (45%), Gaps = 9/353 (2%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
LL+A+C S G + + D ++ G V I+N + + G+ A E N+
Sbjct: 186 LLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGM----CREGRVDDAREFLNRL 241
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
YG + +Y ++ L K ++ + +M+E +P+ ++ +FC+GG
Sbjct: 242 SSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMV 301
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
+ A V ++ +I+++C++ V A L++ +++
Sbjct: 302 ERAIQVLEQMSGHGCAANTTLCNIVINTICKQGR-VDDAFQFLNNMGSYGCSPDTISYTT 360
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
V++ LCR + AK LL +M+ + PP FN+ I + G + A +++ M G
Sbjct: 361 VLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 420
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
+ ++ TY L++G+ G+++ A E+ + + +TY TL+ G C E D A
Sbjct: 421 CEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAA 477
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+LL EM PNV +N L+ C K L A +L+E M G N IT
Sbjct: 478 ELLAEMLQKDCAPNVVTFNVLVSFFCQKGL-MDEAIELVEQMMEHGCTPNLIT 529
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 138/291 (47%), Gaps = 4/291 (1%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+ N +I K G+ AF+ N G YGC + +Y ++ L R + ++ A + ++M
Sbjct: 322 LCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEM 381
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+ P+ I C+ G ++A ++ E L++ C +
Sbjct: 382 VRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGR- 440
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
V AL++ +S + I +++++ LC + + A LL++M+ + P FN
Sbjct: 441 VDSALELF--YSMPCKPNTIT-YTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNV 497
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
++S + + G M A+E+++ M G P++ TY L+ G EEA E+L+ N
Sbjct: 498 LVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNG 557
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
VTY ++I + + + A+K+ + ++D+G++P YNK++ +LC
Sbjct: 558 VSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALC 608
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 118/285 (41%), Gaps = 7/285 (2%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ A + + GC + TY +EA+ + F A V ++M G P+
Sbjct: 159 GRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTY 218
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
II+ C+ G+ +A P ++ LC K D+ + F+
Sbjct: 219 NVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLC----AAKRWEDVEELFA 274
Query: 331 GEARKYAIK---PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG 387
K + F ++R CR V A +L +M G + N VI+ K G
Sbjct: 275 EMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQG 334
Query: 388 DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYH 447
+ A + L M S G PD +YT ++ G + E+A E+L E + + + VT++
Sbjct: 335 RVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFN 394
Query: 448 TLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
T I C+ + A L+ +M + G + N+ YN L+ C++
Sbjct: 395 TFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQG 439
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 138/337 (40%), Gaps = 13/337 (3%)
Query: 184 VKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALS 243
V E+ + V N L+A + + G+ AA + + TY I L
Sbjct: 100 VLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLI---ASMPVAPDAYTYTPIIRGLC 156
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS 303
R A S+ + M+ G P ++ CK +A V R K P
Sbjct: 157 DRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIV 216
Query: 304 VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKT 359
+I+ +C+E +D +F Y +P +++V++ LC K +
Sbjct: 217 TYNVIINGMCREGR-----VDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEE 271
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
L ++M+ + P F+ ++ + + G + A+++L+ M G + +++
Sbjct: 272 LFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTIC 331
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
G++++A + LN ++Y T+++G C+ E ++ A +LL EM PN
Sbjct: 332 KQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEV 391
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+N I LC K L A L+E M G +N +T
Sbjct: 392 TFNTFICILCQKGL-IEQATMLIEQMSEHGCEVNIVT 427
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 116/266 (43%), Gaps = 11/266 (4%)
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A + ++ G PD K+I C+ G+ +A V A L++
Sbjct: 62 AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 121
Query: 311 SLC---QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
C Q D +L M + +A Y + +IR LC V A +LL M+
Sbjct: 122 GYCRYGQLDAARRLIASM--PVAPDAYTY-----TPIIRGLCDRGRVGEALSLLDDMLHR 174
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P + ++ A K+ AME+L MR++G P++ TY +++G G++++A
Sbjct: 175 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 234
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
E LN + V+Y T+++G C + ++ +L EM + PN ++ L++
Sbjct: 235 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRF 294
Query: 488 LCLKALDWRTAEKLLEDMRLKGLHLN 513
C + R A ++LE M G N
Sbjct: 295 FCRGGMVER-AIQVLEQMSGHGCAAN 319
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 130/316 (41%), Gaps = 46/316 (14%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYT---LARE 295
I L RR A V +G+ D +++ +C+ G+ A + +A +
Sbjct: 85 IRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVAPD 144
Query: 296 KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVH 355
Y P +I LC V AL +LDD + ++ ++ ++ ++C+
Sbjct: 145 AYTYTP------IIRGLCDRGR-VGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFG 197
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
A +L +M ++G P +N +I+ + G + A E L + S G +PD +YT ++
Sbjct: 198 QAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVL 257
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK----------LEEF------ 459
G + E+ E+ E + + + VT+ L+R +C+ LE+
Sbjct: 258 KGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCA 317
Query: 460 -------------------DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
D A + LN M G P+ Y +++ LC +A W A++
Sbjct: 318 ANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLC-RAERWEDAKE 376
Query: 501 LLEDMRLKGLHLNGIT 516
LL++M K N +T
Sbjct: 377 LLKEMVRKNCPPNEVT 392
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 8/184 (4%)
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
P ++ +R L D+ A L+ + S G P + +I + G + A +L+
Sbjct: 44 NPANARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRA 103
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKL 456
G DV+ Y L++GY GQ++ A ++ ++P TY +IRG C
Sbjct: 104 AERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP-----VAPDAYTYTPIIRGLCDR 158
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
AL LL++M G QP+V Y L++++C K+ + A ++L++MR KG N +T
Sbjct: 159 GRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVC-KSTGFGQAMEVLDEMRAKGCTPNIVT 217
Query: 517 RALI 520
+I
Sbjct: 218 YNVI 221
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 4/233 (1%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+ F G+ +A E+F C N TY + L + D A + +M++
Sbjct: 429 NALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQ 485
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
P+ ++S+FC+ G EA + E P L+ + +D +
Sbjct: 486 KDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGI-TKDCNSE 544
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
AL++L I +SS+I L R V A + + G P ++N ++
Sbjct: 545 EALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKIL 604
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
A K + A++ M S G P+ TY L+ G AN ++E ++L E
Sbjct: 605 LALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRE 657
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/241 (17%), Positives = 96/241 (39%), Gaps = 40/241 (16%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
LL +C++ + + A +++ E+ +K+ V N L++ F + G A E+ +
Sbjct: 463 LLTGLCNA---ERLDAAAELLAEMLQKDCAP-NVVTFNVLVSFFCQKGLMDEAIELVEQM 518
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
++GC N TY ++ +++ + A + ++ G PD II + +
Sbjct: 519 MEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRV 578
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
+EA ++ + ++ M P + ++
Sbjct: 579 EEAIKMFHIVQDLGMRPKAVI------------------------------------YNK 602
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
++ +LC+ + GA + M+S G P + ++I + + ++L+ + SRG
Sbjct: 603 ILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 662
Query: 404 L 404
+
Sbjct: 663 V 663
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 159/353 (45%), Gaps = 9/353 (2%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
LL+A+C S G + + D ++ G V I+N + + G+ A E N+
Sbjct: 186 LLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGM----CREGRVDDAREFLNRL 241
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
YG + +Y ++ L K ++ + +M+E +P+ ++ +FC+GG
Sbjct: 242 SSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMV 301
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
+ A V ++ +I+++C++ V A L++ +++
Sbjct: 302 ERAIQVLEQMSGHGCAANTTLCNIVINTICKQGR-VDDAFQFLNNMGSYGCSPDTISYTT 360
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
V++ LCR + AK LL +M+ + PP FN+ I + G + A +++ M G
Sbjct: 361 VLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 420
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
+ ++ TY L++G+ G+++ A E+ + + +TY TL+ G C E D A
Sbjct: 421 CEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAA 477
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+LL EM PNV +N L+ C K L A +L+E M G N IT
Sbjct: 478 ELLAEMLQKDCAPNVVTFNVLVSFFCQKGL-MDEAIELVEQMMEHGCTPNLIT 529
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 139/291 (47%), Gaps = 4/291 (1%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+ N +I K G+ AF+ N G YGC + +Y ++ L R + ++ A + ++M
Sbjct: 322 LCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEM 381
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+ P+ I C+ G ++A ++ E L++ C +
Sbjct: 382 VRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGR- 440
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
V AL++ +S + I +++++ LC + + A LL++M+ + P FN
Sbjct: 441 VDSALELF--YSMPCKPNTIT-YTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNV 497
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
++S + + G M A+E+++ M G P++ TY L+ G N EEA E+L+ N
Sbjct: 498 LVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNG 557
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
VTY ++I + + + A+K+ + ++D+G++P YNK++ +LC
Sbjct: 558 VSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALC 608
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 118/285 (41%), Gaps = 7/285 (2%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ A + + GC + TY +EA+ + F A V ++M G P+
Sbjct: 159 GRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTY 218
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
II+ C+ G+ +A P ++ LC K D+ + F+
Sbjct: 219 NVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLC----AAKRWEDVEELFA 274
Query: 331 GEARKYAIK---PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG 387
K + F ++R CR V A +L +M G + N VI+ K G
Sbjct: 275 EMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQG 334
Query: 388 DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYH 447
+ A + L M S G PD +YT ++ G + E+A E+L E + + + VT++
Sbjct: 335 RVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFN 394
Query: 448 TLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
T I C+ + A L+ +M + G + N+ YN L+ C++
Sbjct: 395 TFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQG 439
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 138/337 (40%), Gaps = 13/337 (3%)
Query: 184 VKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALS 243
V E+ + V N L+A + + G+ AA + + TY I L
Sbjct: 100 VLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLI---ASMPVAPDAYTYTPIIRGLC 156
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS 303
R A S+ + M+ G P ++ CK +A V R K P
Sbjct: 157 DRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIV 216
Query: 304 VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKT 359
+I+ +C+E +D +F Y +P +++V++ LC K +
Sbjct: 217 TYNVIINGMCREGR-----VDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEE 271
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
L ++M+ + P F+ ++ + + G + A+++L+ M G + +++
Sbjct: 272 LFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTIC 331
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
G++++A + LN ++Y T+++G C+ E ++ A +LL EM PN
Sbjct: 332 KQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEV 391
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+N I LC K L A L+E M G +N +T
Sbjct: 392 TFNTFICILCQKGL-IEQATMLIEQMSEHGCEVNIVT 427
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 116/266 (43%), Gaps = 11/266 (4%)
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A + ++ G PD K+I C+ G+ +A V A L++
Sbjct: 62 AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 121
Query: 311 SLC---QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
C Q D +L M + +A Y + +IR LC V A +LL M+
Sbjct: 122 GYCRYGQLDAARRLIASM--PVAPDAYTY-----TPIIRGLCDRGRVGEALSLLDDMLHR 174
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P + ++ A K+ AME+L MR++G P++ TY +++G G++++A
Sbjct: 175 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 234
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
E LN + V+Y T+++G C + ++ +L EM + PN ++ L++
Sbjct: 235 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRF 294
Query: 488 LCLKALDWRTAEKLLEDMRLKGLHLN 513
C + R A ++LE M G N
Sbjct: 295 FCRGGMVER-AIQVLEQMSGHGCAAN 319
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 130/316 (41%), Gaps = 46/316 (14%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYT---LARE 295
I L RR A V +G+ D +++ +C+ G+ A + +A +
Sbjct: 85 IRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVAPD 144
Query: 296 KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVH 355
Y P +I LC V AL +LDD + ++ ++ ++ ++C+
Sbjct: 145 AYTYTP------IIRGLCDRGR-VGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFG 197
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
A +L +M ++G P +N +I+ + G + A E L + S G +PD +YT ++
Sbjct: 198 QAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVL 257
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK----------LEEF------ 459
G + E+ E+ E + + + VT+ L+R +C+ LE+
Sbjct: 258 KGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCA 317
Query: 460 -------------------DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
D A + LN M G P+ Y +++ LC +A W A++
Sbjct: 318 ANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLC-RAERWEDAKE 376
Query: 501 LLEDMRLKGLHLNGIT 516
LL++M K N +T
Sbjct: 377 LLKEMVRKNCPPNEVT 392
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 8/184 (4%)
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
P ++ +R L D+ A L+ + S G P + +I + G + A +L+
Sbjct: 44 NPANARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRA 103
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKL 456
G DV+ Y L++GY GQ++ A ++ ++P TY +IRG C
Sbjct: 104 AERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP-----VAPDAYTYTPIIRGLCDR 158
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
AL LL++M G QP+V Y L++++C K+ + A ++L++MR KG N +T
Sbjct: 159 GRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVC-KSTGFGQAMEVLDEMRAKGCTPNIVT 217
Query: 517 RALI 520
+I
Sbjct: 218 YNVI 221
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 95/236 (40%), Gaps = 10/236 (4%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+ F G+ +A E+F C N TY + L + D A + +M++
Sbjct: 429 NALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQ 485
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSL---CQEDE 317
P+ ++S+FC+ G EA + E P L+ + C +E
Sbjct: 486 KDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEE 545
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
AL++L I +SS+I L R V A + + G P ++N
Sbjct: 546 ----ALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYN 601
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
++ A K + A++ M S G P+ TY L+ G AN ++E ++L E
Sbjct: 602 KILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRE 657
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 41/241 (17%), Positives = 95/241 (39%), Gaps = 40/241 (16%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
LL +C++ + + A +++ E+ +K+ V N L++ F + G A E+ +
Sbjct: 463 LLTGLCNA---ERLDAAAELLAEMLQKDCAP-NVVTFNVLVSFFCQKGLMDEAIELVEQM 518
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
++GC N TY ++ ++ + A + ++ G PD II + +
Sbjct: 519 MEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRV 578
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
+EA ++ + ++ M P + ++
Sbjct: 579 EEAIKMFHIVQDLGMRPKAVI------------------------------------YNK 602
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
++ +LC+ + GA + M+S G P + ++I + + ++L+ + SRG
Sbjct: 603 ILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 662
Query: 404 L 404
+
Sbjct: 663 V 663
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 155/339 (45%), Gaps = 11/339 (3%)
Query: 156 VTSGVV------DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSK 209
V SGV+ ++++ CSS KE ++ G E V+T N L+ K
Sbjct: 150 VKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDG-VEPDVVTY---NSLMDYLCK 205
Query: 210 LGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEK 269
G+ A ++F+ G TY ++ + + + + M+ G P+
Sbjct: 206 NGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 265
Query: 270 VGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDF 329
++ + K K +EA +V++ R++ + P +I LC+ V+ A+ +
Sbjct: 266 FSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGR-VEDAMLYFEQM 324
Query: 330 SGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
E ++S+I LC A+ L+ +M+ G FNS+I ++ K G +
Sbjct: 325 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 384
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
+ ++ LM G+KPD+ TY+ L+ GY G+M+EA ++L + VTY TL
Sbjct: 385 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTL 444
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
I GYCK+ AL L EM+ GV P++ YN ++Q L
Sbjct: 445 INGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGL 483
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 163/362 (45%), Gaps = 18/362 (4%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILN--ELIALFSKLGKGKAAFEV 219
+ LL +C +E L I+ + G G ++++ +I F K G +
Sbjct: 55 NILLNGLCDENRSQEALELLHIMADDG----GDCPPDVVSYSTVINGFFKEGDLDKTYST 110
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
+N+ D N TY I AL + + D A V M+++G +PD I+ FC
Sbjct: 111 YNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCS 170
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
G+ KEA V R + P L+ LC+ + A + D + K I
Sbjct: 171 SGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTE-ARKIFDSMTKRGLKPEIT 229
Query: 340 PFSSVIRSLCR---MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ ++++ + ++HG LL M+ G P + VF+ ++ AY+K + AM +
Sbjct: 230 TYGTLLQGYATKGALVEMHG---LLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVF 286
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYC 454
MR +GL P+ TY ++ G++E+A +L + LSP + Y++LI G C
Sbjct: 287 SKMRQQGLNPNAVTYGAVIGILCKSGRVEDA--MLYFEQMIDEGLSPGNIVYNSLIHGLC 344
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG 514
+++ A +L+ EM D G+ N +N +I S C K +EKL + M G+ +
Sbjct: 345 TCNKWERAEELILEMLDRGICLNTIFFNSIIDSHC-KEGRVIESEKLFDLMVRIGVKPDI 403
Query: 515 IT 516
IT
Sbjct: 404 IT 405
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 142/305 (46%), Gaps = 15/305 (4%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G N + + A ++++ + A V KM + G P++ G +I CK G+ ++A
Sbjct: 258 GIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDA 317
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLC---QEDETVKLALDMLDDFSGEARKYAIKP--F 341
+ + ++ + P V LI LC + + +L L+MLD R + F
Sbjct: 318 MLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLD------RGICLNTIFF 371
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+S+I S C+ V ++ L M+ G P ++++I Y AG M A ++L M S
Sbjct: 372 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 431
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+KPD TY+ L++GY +M++A + E + + +TY+ +++G +
Sbjct: 432 VGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 491
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD---WRTAEKL-LEDMRLKGLHLNGITR 517
A +L + G Q + YN ++ LC L R + L L D++L+ N +
Sbjct: 492 AKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMID 551
Query: 518 ALIRA 522
AL++
Sbjct: 552 ALLKV 556
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 137/320 (42%), Gaps = 2/320 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N ++ F G+ K A K G + TY ++ L + A + + M +
Sbjct: 162 NSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTK 221
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ G ++ + G E H + L ++P V + L+ + ++ E V+
Sbjct: 222 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQ-EKVE 280
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A+ + + + +VI LC+ V A +MI EG PGN V+NS+I
Sbjct: 281 EAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLI 340
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
A E++ M RG+ + + ++ + G++ E+ ++ + + +
Sbjct: 341 HGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVK 400
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+TY TLI GYC + D A KLL M VG++P+ Y+ LI C K + A
Sbjct: 401 PDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYC-KISRMKDALV 459
Query: 501 LLEDMRLKGLHLNGITRALI 520
L +M G+ + IT +I
Sbjct: 460 LFREMESSGVSPDIITYNII 479
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/262 (19%), Positives = 100/262 (38%), Gaps = 2/262 (0%)
Query: 191 EKGV-LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
++G+ L N +I K G+ + ++F+ G + TY I+ D
Sbjct: 361 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMD 420
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A + M+ G PD +I+ +CK + K+A V++ + P ++
Sbjct: 421 EATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIIL 480
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
L Q T A ++ + R+ + ++ ++ LC+ K A + +
Sbjct: 481 QGLFQTRRTAA-AKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDL 539
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
FN +I A K G A ++ S GL P+ +TY + G +EE +
Sbjct: 540 KLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQ 599
Query: 430 ILNEAKKNHSRLSPVTYHTLIR 451
+ + N + + ++R
Sbjct: 600 LFLSMEDNGCTVDSGMLNFIVR 621
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 111/293 (37%), Gaps = 7/293 (2%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+ N LI K + A E+ + D G N + I++ + + + + M
Sbjct: 335 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 394
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+ G PD +I +C GK EA + M P + LI+ C+
Sbjct: 395 VRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISR- 453
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+K AL + + I ++ +++ L + + AK L + G + +N
Sbjct: 454 MKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNI 513
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
++ K A+ M + + LK + T+ ++ G+ +EA ++ N
Sbjct: 514 ILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNG 573
Query: 439 SRLSPVTYHTL---IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ TY + I G LEE D +L M+D G + N +++ L
Sbjct: 574 LVPNYWTYRLMAENIIGQGLLEELD---QLFLSMEDNGCTVDSGMLNFIVREL 623
>gi|326508346|dbj|BAJ99440.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 819
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 152/320 (47%), Gaps = 8/320 (2%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
+I N LI ++ G + A + + ++ TY + A + A +C+K
Sbjct: 189 DIYNSLINAHARAGLWRWAINIMDDMLRAAIPPSRATYNNVVNACGAAGNWKKALELCKK 248
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
MI G PD ++S F G + +A + + + + P + +I L + +
Sbjct: 249 MIRNGVGPDLVTHNIVLSAFKNGFQYTKATGYFEMMKGANIAPDTFTLNIVIHCLVKVGQ 308
Query: 318 TVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
A+D+L+ S ++ P ++S+I S V K + M++EG P
Sbjct: 309 HGD-AVDLLN--SMREKRVQCSPDVVTYTSIIHSYYVCGQVENCKAVFDMMVAEGVKPNI 365
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+N+++ AY+ G T A + KL++ GL+PDV +YT L++ Y Q E+A E+ NE
Sbjct: 366 VSYNALLGAYASHGMHTEAFGIFKLLKQNGLRPDVVSYTTLLNAYGRSAQPEKAREVFNE 425
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
+KN + + V+Y+ LI Y F A+ LL+EM+ G+ P+V + L+ + C +
Sbjct: 426 MRKNSCKPNKVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLAA-CGRCR 484
Query: 494 DWRTAEKLLEDMRLKGLHLN 513
+ +LE + +G+ LN
Sbjct: 485 QTTKIDTVLEAAKFRGIELN 504
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 154/351 (43%), Gaps = 20/351 (5%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ALL A S E + ++ ++K+ G + V +LN + + + + A EVFN
Sbjct: 369 NALLGAYASHGMHTEAFGIFKLLKQNGLRPDVVSYTTLLNA----YGRSAQPEKAREVFN 424
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ C N+ +Y I+A +F A S+ +M + G PD + +++ G
Sbjct: 425 EMRKNSCKPNKVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLA---ACG 481
Query: 282 KAKEAHVVYTLAREKKMYPPQ-SVVAFLIS-----SLCQEDETVKL-ALDMLDDFSGEAR 334
+ ++ + T+ K + ++VA+ S ++ +KL A M + + +A
Sbjct: 482 RCRQTTKIDTVLEAAKFRGIELNIVAYNSGIGSYLSFGDYEKALKLYATMMASNVNPDAV 541
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
Y I +I LC++ + M+ P V++S+I +Y K + A
Sbjct: 542 TYNI-----LISGLCKLGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQDKLAEAES 596
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
M++ G PDV TYT ++ Y + G ++ E + N + +L+
Sbjct: 597 TFINMKASGCFPDVLTYTAMIQAYTDHGSWTSVWDLFKEMEGNAILPDAIICSSLMEALN 656
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
K ++ L+L+ M D +Q N Y ++I S C DW+TA +++E +
Sbjct: 657 KGNQYGRVLQLMKFMHDQCIQLNQKAYFEIIAS-CSMLRDWKTASEIIEHL 706
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 153/352 (43%), Gaps = 26/352 (7%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGD--YGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
LN +I K+G+ A ++ N + C + TY I + + +V +
Sbjct: 296 LNIVIHCLVKVGQHGDAVDLLNSMREKRVQCSPDVVTYTSIIHSYYVCGQVENCKAVFDM 355
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M+ G P+ ++ + G EA ++ L ++ + P L+++ + +
Sbjct: 356 MVAEGVKPNIVSYNALLGAYASHGMHTEAFGIFKLLKQNGLRPDVVSYTTLLNAYGRSAQ 415
Query: 318 TVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
K A ++ + E RK + KP ++++I + A +LL +M +G PP
Sbjct: 416 PEK-AREVFN----EMRKNSCKPNKVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDV 470
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+++++A + T +L+ + RG++ ++ Y + Y + G E+A ++
Sbjct: 471 VSISTLLAACGRCRQTTKIDTVLEAAKFRGIELNIVAYNSGIGSYLSFGDYEKALKLYAT 530
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
++ VTY+ LI G CKL ++ +LK +M D+ + + Y+ LI S +K
Sbjct: 531 MMASNVNPDAVTYNILISGLCKLGKYAESLKFFEDMVDLRIPLTKEVYSSLICSY-VKQD 589
Query: 494 DWRTAEKLLEDMRLKGLHLNGIT-RALIRA-------------VKELEEDAI 531
AE +M+ G + +T A+I+A KE+E +AI
Sbjct: 590 KLAEAESTFINMKASGCFPDVLTYTAMIQAYTDHGSWTSVWDLFKEMEGNAI 641
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 75/184 (40%), Gaps = 37/184 (20%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG----------DM- 389
+ +I+ R V A+ L +M P ++NS+I+A+++AG DM
Sbjct: 156 YGMMIQLHARHNQVDQARGLFFEMQEWRCKPDADIYNSLINAHARAGLWRWAINIMDDML 215
Query: 390 ------------------------TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
A+E+ K M G+ PD+ T+ ++S + NG Q
Sbjct: 216 RAAIPPSRATYNNVVNACGAAGNWKKALELCKKMIRNGVGPDLVTHNIVLSAFKNGFQYT 275
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ--PNVDEYNK 483
+A K + T + +I K+ + A+ LLN M++ VQ P+V Y
Sbjct: 276 KATGYFEMMKGANIAPDTFTLNIVIHCLVKVGQHGDAVDLLNSMREKRVQCSPDVVTYTS 335
Query: 484 LIQS 487
+I S
Sbjct: 336 IIHS 339
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 164/389 (42%), Gaps = 55/389 (14%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
++K C + + + L +++E G V I LI K G A +F K
Sbjct: 164 MIKGCCEAGYFVKGFRLLAMLEEFGLSPN----VVIYTTLIDGCCKYGNVMLAKNLFCKM 219
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
G V N TY + ++ + + + E M +G +P++ +IS +C GG
Sbjct: 220 DRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMV 279
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQED---ETVKLALDMLDDFSGEARKYAIKP 340
+A V+ REK + LI LC+ E VKL + K + P
Sbjct: 280 DKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLV--------HKVNKVGLSP 331
Query: 341 ----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
++ +I C + + A L +++ S G P +N++I+ YSK ++ A++++
Sbjct: 332 NIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLV 391
Query: 397 K-----------------------------------LMRSRGLKPDVYTYTGLMSGYANG 421
K LM GL PDVYTY+ L+ G
Sbjct: 392 KEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVH 451
Query: 422 GQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEY 481
G M+EA ++ + H + + V Y+T+I GYCK AL+LLNEM G+ PNV +
Sbjct: 452 GNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASF 511
Query: 482 NKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
I LC + W+ AE LL M GL
Sbjct: 512 CSTIGLLC-RDEKWKEAELLLGQMINSGL 539
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 144/321 (44%), Gaps = 23/321 (7%)
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH 287
C+ Y + A D A + MI G +P S ++ + +A
Sbjct: 85 CLTYTPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAW 144
Query: 288 VVYTLAREKKMYPPQSVVAFLISSLCQEDETVK--LALDMLDDFSGEARKYAIKPFSSVI 345
++ + K + S +I C+ VK L ML++F G + I ++++I
Sbjct: 145 WIFNELKSKVVLDAYSF-GIMIKGCCEAGYFVKGFRLLAMLEEF-GLSPNVVI--YTTLI 200
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
C+ +V AK L KM G P ++ +++ + K G +M + M+ G+
Sbjct: 201 DGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIV 260
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
P+ Y Y L+S Y NGG +++A ++ E ++ +TY+ LI G C+ ++F A+KL
Sbjct: 261 PNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKL 320
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLC-LKALDWRTAEKLLEDMRLKGLHLNGITRALIRA-- 522
++++ VG+ PN+ YN LI C + +D TA +L ++ GL +T + A
Sbjct: 321 VHKVNKVGLSPNIVTYNILINGFCDVGKMD--TAVRLFNQLKSSGLSPTLVTYNTLIAGY 378
Query: 523 ------------VKELEEDAI 531
VKE+EE I
Sbjct: 379 SKVENLAGALDLVKEMEERCI 399
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 135/310 (43%), Gaps = 2/310 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
LN LI F + F V K G T+ I L + F A + + M+
Sbjct: 129 LNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMV 188
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
G PD II+ CK G+ A + E P + LI SLC+ D V
Sbjct: 189 ARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCK-DRLV 247
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
ALD+ + + ++S+I+ LC A +L++M S P F+ +
Sbjct: 248 NEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLL 307
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I + K G++ A +LK M G++P+V TY LM GY+ ++ EA ++ +
Sbjct: 308 IDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGC 367
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
+ +Y LI GYC ++ D A +L NEM G+ PN Y LI + C + R A
Sbjct: 368 KPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFC-QLGKLREAR 426
Query: 500 KLLEDMRLKG 509
+L +DM G
Sbjct: 427 ELFKDMHTNG 436
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 138/296 (46%), Gaps = 5/296 (1%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
T+ LI K G+ A E+F+ GC + TY I L + A +
Sbjct: 160 TIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLI 219
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+KM E G PD +I CK EA +++ + K + P LI LC
Sbjct: 220 KKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSF 279
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
K A ML++ + I FS +I C+ +V A+ +L M G P
Sbjct: 280 SRW-KEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVIT 338
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+NS++ YS ++ A ++ +M +RG KPDV++Y+ L++GY +++EA ++ NE
Sbjct: 339 YNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMI 398
Query: 436 KNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
H L+P V+Y TLI +C+L + A +L +M G P++ Y+ L++ C
Sbjct: 399 --HQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFC 452
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 166/407 (40%), Gaps = 49/407 (12%)
Query: 123 LDSFELDLHEDFVLKVLETPLVLG--ENLVCFFKWVTSGVVDALLKAICSSVGKKEVYAL 180
++ F L H D VL + LG ++ F L+ +C + + L
Sbjct: 133 INCFCLMQHVDLGFSVLAKVIKLGLQPTIITF---------TTLINGLCKAGEFAQALEL 183
Query: 181 WDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIE 240
+D + G + I+N L K+G+ AA + K G+ GC + TY I+
Sbjct: 184 FDDMVARGCQPDVYTYTTIINGL----CKMGETAAAAGLIKKMGEVGCQPDVVTYSTLID 239
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP 300
+L + ++ + A + M G P +I C + KEA + + P
Sbjct: 240 SLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMP 299
Query: 301 PQSVVAFLISSLCQEDETV------KLALDM------------LDDFS-----GEARKY- 336
+ LI C+E + K +M + +S EARK
Sbjct: 300 DIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLF 359
Query: 337 ------AIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
KP +S +I C +K + AK L ++MI +G P + ++I A+ +
Sbjct: 360 DVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQL 419
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
G + A E+ K M + G PD+ TY+ L+ G+ G + +A + + + + + V Y
Sbjct: 420 GKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMY 479
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
LI CK + A KL +E+ G+QP+V Y +I LC + L
Sbjct: 480 TILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGL 526
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 144/329 (43%), Gaps = 21/329 (6%)
Query: 154 KWVTSGVVD--ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLG 211
K ++ VV +L++ +CS KE A+ + + + ++T +L I +F K G
Sbjct: 260 KGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPD-IVTFSLL---IDIFCKEG 315
Query: 212 KGKAAFEVFNKFGDYGCVANQETYY-------FTIEALSRRKIFDWAWSVCEKMIETGSL 264
A V + G N TY +E + RK+FD MI G
Sbjct: 316 NVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDV-------MITRGCK 368
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALD 324
PD +I+ +C + EA ++ + + P LI + CQ + ++ A +
Sbjct: 369 PDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGK-LREARE 427
Query: 325 MLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
+ D + +S ++ C+ + A L M P ++ +I +
Sbjct: 428 LFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMC 487
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV 444
K+G++ A ++ + GL+PDV YT +++G G ++EA E + +++ +
Sbjct: 488 KSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEF 547
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
+Y+ +IRG+ + ++ A++L+ EM+D G
Sbjct: 548 SYNVIIRGFLQHKDESRAVQLIGEMRDKG 576
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 85/175 (48%), Gaps = 2/175 (1%)
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMIS-EGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
I F+ ++ ++ RM+ + A LSK + G P N +I+ + + +
Sbjct: 89 CIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSV 148
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
L + GL+P + T+T L++G G+ +A E+ ++ + TY T+I G CK
Sbjct: 149 LAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCK 208
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+ E A L+ +M +VG QP+V Y+ LI SLC L A + M+ KG+
Sbjct: 209 MGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRL-VNEALDIFSYMKAKGI 262
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 98/232 (42%), Gaps = 5/232 (2%)
Query: 176 EVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETY 235
E L+D++ G K V + IL + ++ + K ++FN+ G N +Y
Sbjct: 354 EARKLFDVMITRGCKPD-VFSYSILINGYCMVKRIDEAK---QLFNEMIHQGLTPNTVSY 409
Query: 236 YFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE 295
I A + A + + M G LPD ++ FCK G +A ++ +
Sbjct: 410 TTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQG 469
Query: 296 KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVH 355
+ P + LI S+C+ + A + + + ++ ++++I LC+ +
Sbjct: 470 TYLKPNLVMYTILIDSMCKSGN-LNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLD 528
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
A KM +G PP +N +I + + D + A++++ MR +G D
Sbjct: 529 EALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVAD 580
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 159/353 (45%), Gaps = 9/353 (2%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
LL+A+C S G + + D ++ G V I+N + + G+ A E N+
Sbjct: 217 LLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGM----CREGRVDDAREFLNRL 272
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
YG + +Y ++ L K ++ + +M+E +P+ ++ +FC+GG
Sbjct: 273 SSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMV 332
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
+ A V ++ +I+++C++ V A L++ +++
Sbjct: 333 ERAIQVLEQMSGHGCAANTTLCNIVINTICKQGR-VDDAFQFLNNMGSYGCSPDTISYTT 391
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
V++ LCR + AK LL +M+ + PP FN+ I + G + A +++ M G
Sbjct: 392 VLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 451
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
+ ++ TY L++G+ G+++ A E+ + + +TY TL+ G C E D A
Sbjct: 452 CEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAA 508
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+LL EM PNV +N L+ C K L A +L+E M G N IT
Sbjct: 509 ELLAEMLQKDCAPNVVTFNVLVSFFCQKGL-MDEAIELVEQMMEHGCTPNLIT 560
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 138/291 (47%), Gaps = 4/291 (1%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+ N +I K G+ AF+ N G YGC + +Y ++ L R + ++ A + ++M
Sbjct: 353 LCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEM 412
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+ P+ I C+ G ++A ++ E L++ C +
Sbjct: 413 VRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGR- 471
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
V AL++ +S + I +++++ LC + + A LL++M+ + P FN
Sbjct: 472 VDSALELF--YSMPCKPNTIT-YTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNV 528
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
++S + + G M A+E+++ M G P++ TY L+ G EEA E+L+ N
Sbjct: 529 LVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNG 588
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
VTY ++I + + + A+K+ + ++D+G++P YNK++ +LC
Sbjct: 589 VSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALC 639
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 118/285 (41%), Gaps = 7/285 (2%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ A + + GC + TY +EA+ + F A V ++M G P+
Sbjct: 190 GRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTY 249
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
II+ C+ G+ +A P ++ LC K D+ + F+
Sbjct: 250 NVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLC----AAKRWEDVEELFA 305
Query: 331 GEARKYAIK---PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG 387
K + F ++R CR V A +L +M G + N VI+ K G
Sbjct: 306 EMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQG 365
Query: 388 DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYH 447
+ A + L M S G PD +YT ++ G + E+A E+L E + + + VT++
Sbjct: 366 RVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFN 425
Query: 448 TLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
T I C+ + A L+ +M + G + N+ YN L+ C++
Sbjct: 426 TFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQG 470
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 138/337 (40%), Gaps = 13/337 (3%)
Query: 184 VKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALS 243
V E+ + V N L+A + + G+ AA + + TY I L
Sbjct: 131 VLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLI---ASMPVAPDAYTYTPIIRGLC 187
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS 303
R A S+ + M+ G P ++ CK +A V R K P
Sbjct: 188 DRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIV 247
Query: 304 VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKT 359
+I+ +C+E +D +F Y +P +++V++ LC K +
Sbjct: 248 TYNVIINGMCREGR-----VDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEE 302
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
L ++M+ + P F+ ++ + + G + A+++L+ M G + +++
Sbjct: 303 LFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTIC 362
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
G++++A + LN ++Y T+++G C+ E ++ A +LL EM PN
Sbjct: 363 KQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEV 422
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+N I LC K L A L+E M G +N +T
Sbjct: 423 TFNTFICILCQKGL-IEQATMLIEQMSEHGCEVNIVT 458
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 116/266 (43%), Gaps = 11/266 (4%)
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A + ++ G PD K+I C+ G+ +A V A L++
Sbjct: 93 AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152
Query: 311 SLC---QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
C Q D +L M + +A Y + +IR LC V A +LL M+
Sbjct: 153 GYCRYGQLDAARRLIASM--PVAPDAYTY-----TPIIRGLCDRGRVGEALSLLDDMLHR 205
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P + ++ A K+ AME+L MR++G P++ TY +++G G++++A
Sbjct: 206 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 265
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
E LN + V+Y T+++G C + ++ +L EM + PN ++ L++
Sbjct: 266 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRF 325
Query: 488 LCLKALDWRTAEKLLEDMRLKGLHLN 513
C + R A ++LE M G N
Sbjct: 326 FCRGGMVER-AIQVLEQMSGHGCAAN 350
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 127/313 (40%), Gaps = 40/313 (12%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
I L RR A V +G+ D +++ +C+ G+ A L +
Sbjct: 116 IRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAAR---RLIASMPV 172
Query: 299 YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
P +I LC V AL +LDD + ++ ++ ++ ++C+ A
Sbjct: 173 APDAYTYTPIIRGLCDRGR-VGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAM 231
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+L +M ++G P +N +I+ + G + A E L + S G +PD +YT ++ G
Sbjct: 232 EVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGL 291
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK----------LEEF--------- 459
+ E+ E+ E + + + VT+ L+R +C+ LE+
Sbjct: 292 CAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANT 351
Query: 460 ----------------DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
D A + LN M G P+ Y +++ LC +A W A++LL+
Sbjct: 352 TLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLC-RAERWEDAKELLK 410
Query: 504 DMRLKGLHLNGIT 516
+M K N +T
Sbjct: 411 EMVRKNCPPNEVT 423
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A L+ + S G P + +I + G + A +L+ G DV+ Y L++
Sbjct: 93 AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGV 474
GY GQ++ A ++ ++P TY +IRG C AL LL++M G
Sbjct: 153 GYCRYGQLDAARRLIASMP-----VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGC 207
Query: 475 QPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
QP+V Y L++++C K+ + A ++L++MR KG N +T +I
Sbjct: 208 QPSVVTYTVLLEAVC-KSTGFGQAMEVLDEMRAKGCTPNIVTYNVI 252
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 4/233 (1%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+ F G+ +A E+F C N TY + L + D A + +M++
Sbjct: 460 NALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQ 516
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
P+ ++S+FC+ G EA + E P L+ + +D +
Sbjct: 517 KDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGI-TKDCNSE 575
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
AL++L I +SS+I L R V A + + G P ++N ++
Sbjct: 576 EALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKIL 635
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
A K + A++ M S G P+ TY L+ G AN ++E ++L E
Sbjct: 636 LALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRE 688
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/242 (16%), Positives = 96/242 (39%), Gaps = 40/242 (16%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
LL +C++ + + A +++ E+ +K+ V N L++ F + G A E+ +
Sbjct: 493 TLLTGLCNA---ERLDAAAELLAEMLQKDCAP-NVVTFNVLVSFFCQKGLMDEAIELVEQ 548
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
++GC N TY ++ +++ + A + ++ G PD II + +
Sbjct: 549 MMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDR 608
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+EA ++ + ++ M P + ++
Sbjct: 609 VEEAIKMFHIVQDLGMRPKAVI------------------------------------YN 632
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
++ +LC+ + GA + M+S G P + ++I + + ++L+ + SR
Sbjct: 633 KILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSR 692
Query: 403 GL 404
G+
Sbjct: 693 GV 694
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 151/356 (42%), Gaps = 6/356 (1%)
Query: 161 VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVF 220
+ +L+ C + +L D + EIG K + N +I K + AF+ F
Sbjct: 158 IGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPD----IVAYNAIIDSLCKTKRVNDAFDFF 213
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ G N TY + L + A + MI+ P+ ++ F K
Sbjct: 214 KEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKN 273
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
GK EA ++ + P + LI+ LC D + A M D + +
Sbjct: 274 GKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR-IDEANQMFDLMVSKGCLADVVS 332
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++++I C+ K V L +M G +N++I + +AGD+ A E M
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 392
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G+ PD++TY L+ G + G++E+A I + +K L VTY T+IRG CK + +
Sbjct: 393 FFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVE 452
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A L + G++P++ Y ++ LC K L E L M+ +GL N T
Sbjct: 453 EAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL-LHEVEALYTKMKQEGLMKNDCT 507
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 100/216 (46%), Gaps = 7/216 (3%)
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A+D+ D +I F+ ++ ++ ++K +L KM G FN VI+
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
+ ++ A+ +L M G +PD T L++G+ ++ +A ++++ + +
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
V Y+ +I CK + + A E++ G++PNV Y L+ LC + W A +L
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLC-NSSRWSDAARL 247
Query: 502 LEDMRLKGLHLNGITRALIRAVKELEEDAIENGEAL 537
L DM K + N IT + L + ++NG+ L
Sbjct: 248 LSDMIKKKITPNVITYS------ALLDAFVKNGKVL 277
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 84/169 (49%), Gaps = 3/169 (1%)
Query: 350 RMKDV--HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
R++D+ + A L S M+ P P FN ++SA K + + K M G++ D
Sbjct: 60 RLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRND 119
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
+YT+ +++ + Q+ A IL + K VT +L+ G+C+ A+ L++
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+M ++G +P++ YN +I SLC K A +++ KG+ N +T
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLC-KTKRVNDAFDFFKEIERKGIRPNVVT 227
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 1/165 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F+ VI C V A ++L KM+ G P S+++ + + ++ A+ ++ M
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G KPD+ Y ++ ++ +A + E ++ R + VTY L+ G C +
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
A +LL++M + PNV Y+ L+ + +K A++L E+M
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAF-VKNGKVLEAKELFEEM 286
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 135/286 (47%), Gaps = 7/286 (2%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N LI F K AA + F + G N TY I L + A + +KM+
Sbjct: 276 FNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMV 335
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---D 316
G P+ +I+ FCK KEA V+ ++++ P +I + C+E +
Sbjct: 336 GLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMME 395
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
E L MLD E + ++ +I LCR +D+ AK LL++M ++G +
Sbjct: 396 EGFSLCSSMLD----EGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTY 451
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N +I K A ++L M + GLKP+ TY LM GY G+++ A + +K
Sbjct: 452 NILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEK 511
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
+ + VTY+ LI+GYCK+ + + A LLNEM + G+ PN Y+
Sbjct: 512 ERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYD 557
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 138/291 (47%), Gaps = 2/291 (0%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
N+ T+ I+ + + A E+M + G P+ +I+ C GK +EA ++
Sbjct: 272 NEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLW 331
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
+ P LI+ C++ + +K A + DD S + + F+++I + C+
Sbjct: 332 DKMVGLGLKPNIVTYNALINGFCKK-KMMKEATKVFDDVSKQELVPNVITFNTMIDAYCK 390
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ +L S M+ EG P + +N +I+ + D+ A E+L M ++GLK DV T
Sbjct: 391 EGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVT 450
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
Y L+ G + A ++LNE + + VTY+TL+ GYC + AL + M+
Sbjct: 451 YNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRME 510
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIR 521
QPNV YN LI+ C K A LL +M KGL+ N T ++R
Sbjct: 511 KERKQPNVVTYNVLIKGYC-KINKLEAANGLLNEMLEKGLNPNRTTYDIVR 560
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 153/330 (46%), Gaps = 9/330 (2%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSR-RKIFDWAWSV 254
T I++ L+ + K + A+E F + DYG + + + AL + KI D + V
Sbjct: 129 TALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEY-V 187
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
++MI+ + I+ C+ GK +A + + P L+ C+
Sbjct: 188 YKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCK 247
Query: 315 EDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
K+ + F E I P F+++I C+ ++V AK +M +G
Sbjct: 248 RGSAGKMY--KAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLK 305
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P +NS+I+ G + A+++ M GLKP++ TY L++G+ M+EA ++
Sbjct: 306 PNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKV 365
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
++ K + +T++T+I YCK + L + M D G+ PNV YN LI LC
Sbjct: 366 FDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCR 425
Query: 491 KALDWRTAEKLLEDMRLKGLHLNGITRALI 520
K D + A++LL +M KGL + +T ++
Sbjct: 426 KQ-DLQAAKELLNEMENKGLKGDVVTYNIL 454
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 140/311 (45%), Gaps = 11/311 (3%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRR----KIFDWA 251
+ N I + GK A + +G N TY ++ +R K++ A
Sbjct: 199 NLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYK-A 257
Query: 252 WSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISS 311
+ ++M+ P+ +I FCK A + +++ + P LI+
Sbjct: 258 EAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLING 317
Query: 312 LCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
LC + ++ A+D+ D G K I ++++I C+ K + A + + + P
Sbjct: 318 LCNNGK-LEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVP 376
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
FN++I AY K G M + M G+ P+V TY L++G ++ A E+L
Sbjct: 377 NVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELL 436
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
NE + + VTY+ LI G CK ++ A KLLNEM ++G++PN YN L+ C++
Sbjct: 437 NEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCME 496
Query: 492 -----ALDWRT 497
AL+ RT
Sbjct: 497 GKLKAALNVRT 507
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 121/272 (44%), Gaps = 40/272 (14%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
++L+ +C++ +E LWD + +G K + N LI F K K A +VF+
Sbjct: 312 NSLINGLCNNGKLEEAIDLWDKMVGLGLKP----NIVTYNALINGFCKKKMMKEATKVFD 367
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
V N T+ I+A + + + +S+C M++ G LP+ + ++ C
Sbjct: 368 DVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPN------VSTYNC--- 418
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
LI+ LC++ + ++ A ++L++ + K + +
Sbjct: 419 --------------------------LIAGLCRKQD-LQAAKELLNEMENKGLKGDVVTY 451
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+ +I LC+ A+ LL++M + G P + +N+++ Y G + A+ + M
Sbjct: 452 NILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEK 511
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+P+V TY L+ GY ++E A +LNE
Sbjct: 512 ERKQPNVVTYNVLIKGYCKINKLEAANGLLNE 543
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 101/247 (40%), Gaps = 21/247 (8%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+AL+ C KE ++D V K++ V V N +I + K G + F + +
Sbjct: 347 NALINGFCKKKMMKEATKVFDDV----SKQELVPNVITFNTMIDAYCKEGMMEEGFSLCS 402
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
D G + N TY I L R++ A + +M G D +I CK
Sbjct: 403 SMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKND 462
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
K++ A + + P L+ C E + +K AL++ E ++ + +
Sbjct: 463 KSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGK-LKAALNVRTRMEKERKQPNVVTY 521
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+ +I+ C++ + A LL++M+ +G P ++ V +EML+
Sbjct: 522 NVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV------------RLEMLE---- 565
Query: 402 RGLKPDV 408
+G PD+
Sbjct: 566 KGFSPDI 572
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 81/200 (40%), Gaps = 19/200 (9%)
Query: 336 YAIKPFSSVIRSLCRMK---------------DVHGAKTLLSKMISEGPPPGNA--VFNS 378
Y ++P S V+ L K + H ++ ++ +G PG + +
Sbjct: 76 YGLEPTSKVLHFLANSKRYSKVRSFLDSFVKNEKHTVSSVFHSLLLDGGRPGATALIIDM 135
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
++ AY K ++ A E + G K + + L+S ++ + + E K
Sbjct: 136 LVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRR 195
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK--ALDWR 496
+ T++ I G C+ + + A + +MK G+ PNV YN L+ C + A
Sbjct: 196 IHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMY 255
Query: 497 TAEKLLEDMRLKGLHLNGIT 516
AE +++M + N +T
Sbjct: 256 KAEAFMKEMLANKICPNEVT 275
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 155/325 (47%), Gaps = 14/325 (4%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALS-RRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
A + F+K +YG + + + LS +R + V + + G ++E ++
Sbjct: 58 ARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNILM 117
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR 334
+ + GK +EAH + K P +I C E K+ + ++ + +
Sbjct: 118 NSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKV-VQLVKEMQLKGL 176
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
K + +SS+I LC+ V + +L +M+ G P + ++ ++I + K G+ A +
Sbjct: 177 KPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYK 236
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+ M +R + PD ++ L+ G + G++ EA ++ NE K VTY LI GYC
Sbjct: 237 LFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYC 296
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL-- 512
KL E A L N+M +G+ PNV Y L LC K+ + TA +LL +M KGL L
Sbjct: 297 KLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLC-KSGELDTANELLHEMCRKGLQLNI 355
Query: 513 -------NGITRA--LIRAVKELEE 528
NG+ +A +++AVK +EE
Sbjct: 356 STYNTIVNGLCKAGNILQAVKLMEE 380
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 151/318 (47%), Gaps = 10/318 (3%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
L L SK +VF++F G N E+Y + +L R A + +M G
Sbjct: 81 LTCLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKG 140
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+PD II +C G+ ++ + + K + P + +I LC+ + V+
Sbjct: 141 CIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVE-- 198
Query: 323 LDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+ E K + P ++++I C++ + A L S+M + P + F++
Sbjct: 199 ---GEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSA 255
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I S +G + A ++ M +G +PD TYT L+ GY G+M++A + N+ +
Sbjct: 256 LICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIG 315
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
+ VTY L G CK E D A +LL+EM G+Q N+ YN ++ LC KA + A
Sbjct: 316 LTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLC-KAGNILQA 374
Query: 499 EKLLEDMRLKGLHLNGIT 516
KL+E+M+ GLH + IT
Sbjct: 375 VKLMEEMKEAGLHPDTIT 392
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 157/334 (47%), Gaps = 7/334 (2%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
I LI F KLG +AA+++F++ V + + I LS A + +M
Sbjct: 217 IYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEM 276
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
I+ G PD +I +CK G+ K+A ++ + + P L LC+ E
Sbjct: 277 IKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGE- 335
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+ A ++L + + + I +++++ LC+ ++ A L+ +M G P + +
Sbjct: 336 LDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTT 395
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
++ AY K G+M A E+L+ M RGL+P V T+ LM+G G++E+ +L +
Sbjct: 396 LMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKG 455
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
+ TY+++++ YC + ++ M GV P+ + YN LI+ C KA + + A
Sbjct: 456 IMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHC-KARNMKEA 514
Query: 499 EKLLEDMRLKGLHL-----NGITRALIRAVKELE 527
L ++M K +L N + + + K LE
Sbjct: 515 WFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLE 548
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 140/308 (45%), Gaps = 2/308 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I L K GK +V + G + Y I+ + A+ + +M
Sbjct: 186 IILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEARE 245
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+PDS +I GK EA ++ +K P + LI C+ E +K A
Sbjct: 246 IVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGE-MKKA 304
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+ + + ++++ LC+ ++ A LL +M +G + +N++++
Sbjct: 305 FFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNG 364
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
KAG++ A+++++ M+ GL PD TYT LM Y G+M +A E+L E + +
Sbjct: 365 LCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPT 424
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
VT++ L+ G C + + +LL M + G+ PN YN +++ C++ + R + ++
Sbjct: 425 VVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRN-NMRISTEIY 483
Query: 503 EDMRLKGL 510
M +G+
Sbjct: 484 RGMCAQGV 491
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 129/283 (45%), Gaps = 1/283 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + KLG+ K AF + N+ G N TY + L + D A + +M G
Sbjct: 291 LIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKG 350
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+ I++ CK G +A + +E ++P L+ + + E VK A
Sbjct: 351 LQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVK-A 409
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++L + + + F+ ++ LC + + LL M+ +G P A +NS++
Sbjct: 410 RELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQ 469
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y +M + E+ + M ++G+ PD TY L+ G+ M+EA + E + L+
Sbjct: 470 YCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLT 529
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
+Y+ LI+G+ K ++ A +L EM+ G+ + + YN +
Sbjct: 530 ASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFV 572
>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 721
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 139/305 (45%), Gaps = 2/305 (0%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
GK A +F + G+ G AN TY I++ RR D A +KM +
Sbjct: 206 GKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPY 265
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
+I+ +CK G A A + +K + P LIS C E E K A + ++ +
Sbjct: 266 NSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHK-AFKVYNEMT 324
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
+ F+++I LCR + A L +M P +N +I + ++G+++
Sbjct: 325 AKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNIS 384
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A +L M +G PD YTY L+SG + G++ EA E +++ K+H +L+ + Y L+
Sbjct: 385 EAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALV 444
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
GYCK F A+ M + GV ++ Y LI + D R LL++M GL
Sbjct: 445 HGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTA-REHDTRALFGLLKEMHNHGL 503
Query: 511 HLNGI 515
+ +
Sbjct: 504 RPDAV 508
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 119/299 (39%), Gaps = 1/299 (0%)
Query: 195 LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSV 254
TV N LI + KLG AA F++ D G TY I + A+ V
Sbjct: 260 FTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKV 319
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
+M G P++ IIS C+ EA ++ +E+K+ P + +I C+
Sbjct: 320 YNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCR 379
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
+ A +LD+ G+ + +I LC + V AK + + + N
Sbjct: 380 SG-NISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNM 438
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
+++++ Y K G A+ ++M RG+ D+ Y L+ G A +L E
Sbjct: 439 CYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEM 498
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
+ R V Y +I + K A L + M D G PNV Y LI LC L
Sbjct: 499 HNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGL 557
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 158/391 (40%), Gaps = 74/391 (18%)
Query: 191 EKGVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
+KG+ TV LI+ + G+ AF+V+N+ G N T+ I L R +
Sbjct: 290 DKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMA 349
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A + +M E +P +I C+ G EA + K P LI
Sbjct: 350 EAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLI 409
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLC---RMKDV------------ 354
S LC V A + +DD + K +S+++ C R KD
Sbjct: 410 SGLCSVGR-VSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGV 468
Query: 355 -----------------HGAKTL---LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
H + L L +M + G P ++ ++I +SKAG++ A
Sbjct: 469 AMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFG 528
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE--------------------- 433
+ +M G P+V TYT L++G G M++A E+L++
Sbjct: 529 LWDIMVDEGCLPNVVTYTALINGLCKAGLMDKA-ELLSKETLVSDVTPNHITYGCFLDHL 587
Query: 434 ---------AKKNHSRL-----SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
+ +H+ L + V+Y+ LIRG+C+L + + A KLL+ M D + P+
Sbjct: 588 TRGGNMEKAVQLHHAMLKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYI 647
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
Y+ +I C ++ + + A KL M KGL
Sbjct: 648 TYSTIIYEQCKRS-NLQEAIKLWHTMLDKGL 677
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 96/225 (42%), Gaps = 27/225 (12%)
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
L + DD + I +S+V+RSLC +KD + AK ++ M V+N +I
Sbjct: 115 VLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIH 174
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG--------------------------LM 415
K+ + A+E+ + +GL+ +V TY G L+
Sbjct: 175 GLCKSRRIWEALEIKNCLMQKGLEANVVTYYGKFNEAELLFKEMGEKGLCANHITYSILI 234
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
+ G+M+ A L++ K + Y++LI GYCKL A +EM D G+
Sbjct: 235 DSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLT 294
Query: 476 PNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
P V Y LI C + +W A K+ +M KG+ N T I
Sbjct: 295 PTVVTYTSLISGYCNEG-EWHKAFKVYNEMTAKGISPNTYTFTAI 338
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 123/290 (42%), Gaps = 11/290 (3%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
N Y + + F A S C M+E G D +I G A+E
Sbjct: 436 NNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILID-----GTAREHDTRA 490
Query: 291 TLAREKKMYP----PQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
K+M+ P +V+ + + +K A + D E + ++++I
Sbjct: 491 LFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALIN 550
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
LC+ + A+ L + + P + + + ++ G+M A+++ M +G
Sbjct: 551 GLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAML-KGFLA 609
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
+Y L+ G+ G++EEA ++L+ N +TY T+I CK A+KL
Sbjct: 610 TTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLW 669
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ M D G++P+ Y+ L+ C+ A + A +L ++M +G+ N +T
Sbjct: 670 HTMLDKGLKPDTLAYSFLVHGCCI-AGELEKAFELRDEMIRRGMRSNHVT 718
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 110/270 (40%), Gaps = 44/270 (16%)
Query: 179 ALWDIVKEI---GEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETY 235
AL+ ++KE+ G + V I +I SK G K AF +++ D GC+ N TY
Sbjct: 490 ALFGLLKEMHNHGLRPDAV----IYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTY 545
Query: 236 YFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE 295
I L + + D A + ++ + + P+ G + +GG ++A
Sbjct: 546 TALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKA--------- 596
Query: 296 KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVH 355
V+L ML F Y I +IR CR+ +
Sbjct: 597 -----------------------VQLHHAMLKGFLATTVSYNI-----LIRGFCRLGKIE 628
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
A LL M P ++++I K ++ A+++ M +GLKPD Y+ L+
Sbjct: 629 EATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLV 688
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVT 445
G G++E+A E+ +E + R + VT
Sbjct: 689 HGCCIAGELEKAFELRDEMIRRGMRSNHVT 718
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 58/120 (48%), Gaps = 1/120 (0%)
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
+LM+ L P+V T + L++G + + + ++ + + Y ++R C+L
Sbjct: 85 RLMKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCEL 144
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++F+ A ++++ M+ + ++ YN LI LC W E + + KGL N +T
Sbjct: 145 KDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALE-IKNCLMQKGLEANVVT 203
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 140/306 (45%), Gaps = 2/306 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
LN +I F + K A+ V K G + T+ I L A + +M+
Sbjct: 103 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMV 162
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
E G P+ I++ CK G A + E+ + + +I SLC+ D +
Sbjct: 163 ENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCR-DGCI 221
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
A+ + + + K ++ ++S++ LC+ + LL M S P FN +
Sbjct: 222 DAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVL 281
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I + K G + A E+ K M ++G+ P+ TY LM GY ++ EA +L+ +N+
Sbjct: 282 IDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNC 341
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
VT+ +LI+GYCK++ D +KL ++ G+ N Y+ L+Q C ++ AE
Sbjct: 342 SPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFC-QSGKLEIAE 400
Query: 500 KLLEDM 505
+L ++M
Sbjct: 401 ELFQEM 406
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 137/309 (44%), Gaps = 3/309 (0%)
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
AA +F + G ++ TY + L + ++ + + M +P+ +I
Sbjct: 223 AAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLI 282
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR 334
F K GK +EA+ +Y K + P L+ C ++ + A +MLD
Sbjct: 283 DVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSE-ANNMLDLMVRNNC 341
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
I F+S+I+ C++K V L K+ G ++ ++ + ++G + A E
Sbjct: 342 SPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEE 401
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+ + M S G+ PDV TY L+ G + G++E+A EI + +K+ L V Y +I G C
Sbjct: 402 LFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMC 461
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG 514
K + + A L + GV+PNV Y +I LC K A LL M G N
Sbjct: 462 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG-SLSEANILLRKMEEDGNEPND 520
Query: 515 IT-RALIRA 522
T LIRA
Sbjct: 521 CTYNTLIRA 529
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 122/276 (44%), Gaps = 37/276 (13%)
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP 300
++ K F+ C+KM G + + +I+ FC+ K A+ V + P
Sbjct: 74 GVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEP 133
Query: 301 PQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTL 360
+ LI+ LC E + V A L
Sbjct: 134 DTTTFNTLINGLCLESK------------------------------------VSEAVVL 157
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
+++M+ G P +NS+++ K+GD + A+++L+ M R +K DV+TY+ ++
Sbjct: 158 VARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCR 217
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
G ++ A + E + + S VTY++L+ G CK +++ ++LL +M + PNV
Sbjct: 218 DGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVIT 277
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+N LI +K + A +L ++M KG+ N IT
Sbjct: 278 FNVLIDVF-VKEGKLQEANELYKEMITKGISPNTIT 312
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 125/298 (41%), Gaps = 1/298 (0%)
Query: 191 EKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDW 250
K + V N LI +F K GK + A E++ + G N TY ++ +
Sbjct: 269 RKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSE 328
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A ++ + M+ PD +I +CK + E ++ ++ + + L+
Sbjct: 329 ANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQ 388
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
CQ + +++A ++ + + + ++ LC + A + +
Sbjct: 389 GFCQSGK-LEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMN 447
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
++ +I K G + A + + +G+KP+V TYT ++SG G + EA +
Sbjct: 448 LDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 507
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
L + +++ + + TY+TLIR + + + + KL+ EMK G + +I L
Sbjct: 508 LRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 565
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 85/195 (43%), Gaps = 1/195 (0%)
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A+D+ + ++ FS + K + KM G N +I+
Sbjct: 49 AIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMIN 108
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
+ + A +L + G +PD T+ L++G ++ EA ++ +N +
Sbjct: 109 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQP 168
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+ VTY++++ G CK + AL LL +M + V+ +V Y+ +I SLC A L
Sbjct: 169 NVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGC-IDAAISL 227
Query: 502 LEDMRLKGLHLNGIT 516
++M KG+ + +T
Sbjct: 228 FKEMETKGIKSSLVT 242
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 160/360 (44%), Gaps = 10/360 (2%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
LL +CS + L+D + ++G + I+ L K+G A ++ K
Sbjct: 146 TLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGL----CKIGHTTNALQLLKK 201
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ GC + Y I++L + + + A +M++ G P+ I+ FC G+
Sbjct: 202 MEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQ 261
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV--KLALDMLDDFSGEARKYAIKP 340
EA ++ + + P L+ LC+E + + +M+ + E Y
Sbjct: 262 LNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYT--- 318
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+S+++ C + A+ L M+ +G P V+N +I+ + K+ + A +L M
Sbjct: 319 YSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMY 378
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
R L PD TY+ LM G+ G+ + A ++ E +TY L+ G CK D
Sbjct: 379 DRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLD 438
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
A +LL M++ ++P++ YN LIQ +C A +L ++ +KG+ + +T ++
Sbjct: 439 EAFRLLKAMQESKIEPHICIYNILIQGMC-NFGKLEAARELFSNLFVKGIQPSVVTYTVM 497
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 147/334 (44%), Gaps = 22/334 (6%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEAL-SRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
AF K G T+ + L S+ KI D A + +++ + G P II
Sbjct: 125 AFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIID-AVKLFDEIGKMGFAPSLITYTTII 183
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGE 332
CK G A + EK P VVA+ +I SLC+ D A+ + +
Sbjct: 184 KGLCKIGHTTNALQLLKKMEEKGCKP--DVVAYNTVIDSLCK-DRRANEAMYFFSEMVDQ 240
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
+ +SS++ C + ++ A +L +MI P F ++ K G + A
Sbjct: 241 GIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEA 300
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
+ ++M G++PD YTY+ LM GY QM+EA ++ + S Y+ LI G
Sbjct: 301 RRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILING 360
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
+CK + A LL+EM D + P+ Y+ L+Q C +A + A+KL ++M GL
Sbjct: 361 HCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFC-QAGRPQVAQKLFKEMCSYGLLP 419
Query: 513 NGITRALI--------------RAVKELEEDAIE 532
+ IT +++ R +K ++E IE
Sbjct: 420 DSITYSILLDGLCKHGHLDEAFRLLKAMQESKIE 453
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 153/357 (42%), Gaps = 12/357 (3%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
++K +C L ++E G K V N +I K + A F++
Sbjct: 181 TIIKGLCKIGHTTNALQLLKKMEEKGCKPD----VVAYNTVIDSLCKDRRANEAMYFFSE 236
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
D G N TY + + A S+ ++MI +P++ ++ CK G
Sbjct: 237 MVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGM 296
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLC---QEDETVKLALDMLDDFSGEARKYAIK 339
EA V+ + E + P + L+ C Q DE KL D G+ +++
Sbjct: 297 ILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKL----FDIMVGKGFAPSVR 352
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
++ +I C+ + ++ AKTLLS+M P +++++ + +AG A ++ K M
Sbjct: 353 VYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEM 412
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
S GL PD TY+ L+ G G ++EA +L +++ Y+ LI+G C +
Sbjct: 413 CSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKL 472
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ A +L + + G+QP+V Y +I L + L E + M + G N T
Sbjct: 473 EAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACE-MFRKMVVNGCLPNSCT 528
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 121/274 (44%), Gaps = 2/274 (0%)
Query: 243 SRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQ 302
S R +A+S KM + G P G +++ C K +A ++ + P
Sbjct: 117 SNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSL 176
Query: 303 SVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLS 362
+I LC+ T AL +L + K + +++VI SLC+ + + A S
Sbjct: 177 ITYTTIIKGLCKIGHTTN-ALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFS 235
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG 422
+M+ +G PP ++S++ + G + A + K M R + P+ T+T L+ G G
Sbjct: 236 EMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEG 295
Query: 423 QMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
+ EA + +N TY L+ GYC + D A KL + M G P+V YN
Sbjct: 296 MILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYN 355
Query: 483 KLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
LI C K+ A+ LL +M + L + +T
Sbjct: 356 ILINGHC-KSRRLNEAKTLLSEMYDRDLTPDTVT 388
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 134/308 (43%), Gaps = 10/308 (3%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
F LG+ A +F + + N T+ ++ L + + A V E M E G PD
Sbjct: 256 FCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPD 315
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLAL 323
+ ++ +C + EA ++ + K P V LI+ C+ +E L
Sbjct: 316 AYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLS 375
Query: 324 DMLD-DFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+M D D + + Y S++++ C+ A+ L +M S G P + ++ ++
Sbjct: 376 EMYDRDLTPDTVTY-----STLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDG 430
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
K G + A +LK M+ ++P + Y L+ G N G++E A E+ + + S
Sbjct: 431 LCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPS 490
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
VTY +I G K + A ++ +M G PN YN IQ L+ D A +L+
Sbjct: 491 VVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGF-LRNGDPSNAVRLI 549
Query: 503 EDMRLKGL 510
E+M +G
Sbjct: 550 EEMVGRGF 557
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 78/161 (48%), Gaps = 3/161 (1%)
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ V A ++++ P P VFN ++ + K + + + K M ++P+VYT
Sbjct: 47 LHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYT 106
Query: 411 YTGLMSG--YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNE 468
T L++ ++N + A L + K + + VT+ TL+ G C + A+KL +E
Sbjct: 107 LTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDE 166
Query: 469 MKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
+ +G P++ Y +I+ LC K A +LL+ M KG
Sbjct: 167 IGKMGFAPSLITYTTIIKGLC-KIGHTTNALQLLKKMEEKG 206
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 138/298 (46%), Gaps = 9/298 (3%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
T+ N L+ K+G+ + A ++ K D GC + TY I+ L ++K A+ +
Sbjct: 68 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLF 127
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
++M G D+ +I + GK +A VY + P ++ +I LC+
Sbjct: 128 KEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKA 187
Query: 316 DETVKLALDMLDDFSGEARKYAIKP--FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
+ A+ + S EAR A +S++I LC+ + + A +L++M P
Sbjct: 188 GR-IGAAVRIFK--SMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 244
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+N +I K+GD+ A M G KPDVYTY L+SG+ G + AC + ++
Sbjct: 245 ITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDD 304
Query: 434 AKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ SR SP VTY TLI G CK + A MK+ G P+ Y+ L+ LC
Sbjct: 305 M--SSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLC 360
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 127/279 (45%), Gaps = 2/279 (0%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
GC + TY ++ L++ K A ++ EK+ G P +++ CK G+ +EA
Sbjct: 29 GCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEA 88
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
+ + P LI L ++ + + A + + + ++++IR
Sbjct: 89 IDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFE-AYKLFKEMASRGLALDTVCYTALIR 147
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
L + + A ++ M S+G P +++I KAG + A+ + K M +RGL P
Sbjct: 148 GLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAP 207
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
+ Y+ L+ G +M+ A E+L + KK +TY+ LI G CK + A
Sbjct: 208 NEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFF 267
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
+EM + G +P+V YN LI C KA + A + +DM
Sbjct: 268 DEMLEAGCKPDVYTYNILISGFC-KAGNTDAACGVFDDM 305
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 115/272 (42%), Gaps = 2/272 (0%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
T+ I L + + A S+ ++ G D I+ W K K +EA +
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
P + L++ LC+ ++ A+D+L + ++S+I L + K
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGR-LEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKR 119
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
A L +M S G + ++I +AG + A + K M S+G PDV T +
Sbjct: 120 SFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLST 179
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
++ G G++ A I + + V Y LI G CK + DCAL++L +MK
Sbjct: 180 MIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAF 239
Query: 474 VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
P+ YN LI LC K+ D A ++M
Sbjct: 240 CTPDTITYNILIDGLC-KSGDVAAARAFFDEM 270
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 108/241 (44%), Gaps = 16/241 (6%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKK-------MYPPQSVVAFLISSLCQEDETVKLALDM 325
+I+ K G +AH +LA+E ++ ++V +L +++ ++ A+ +
Sbjct: 5 LINGLVKAGMLIQAH---SLAQETTTNGCTIDIHTYTTIVDWL-----AKNKKIQEAVAL 56
Query: 326 LDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSK 385
++ + I +++++ LC+M + A LL K++ G P + S+I K
Sbjct: 57 MEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGK 116
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
A ++ K M SRGL D YT L+ G G++ +A + VT
Sbjct: 117 KKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVT 176
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
T+I G CK A+++ M+ G+ PN Y+ LI LC KA A ++L M
Sbjct: 177 LSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLC-KARKMDCALEMLAQM 235
Query: 506 R 506
+
Sbjct: 236 K 236
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 2/187 (1%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
I +++++ L + K + A L+ K+ + G P A +N++++ K G + A+++L+
Sbjct: 34 IHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLR 93
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
+ G PDV TYT L+ G + EA ++ E L V Y LIRG +
Sbjct: 94 KIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAG 153
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT- 516
+ A + M G P+V + +I LC KA A ++ + M +GL N +
Sbjct: 154 KIPQASSVYKTMTSQGCVPDVVTLSTMIDGLC-KAGRIGAAVRIFKSMEARGLAPNEVVY 212
Query: 517 RALIRAV 523
ALI +
Sbjct: 213 SALIHGL 219
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 77/150 (51%), Gaps = 2/150 (1%)
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
F+ +I+ KAG + A + + + G D++TYT ++ A +++EA ++ +
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
N + TY+ L+ G CK+ + A+ LL ++ D G P+V Y LI L K
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120
Query: 495 WRTAEKLLEDMRLKGLHLNGIT-RALIRAV 523
+ A KL ++M +GL L+ + ALIR +
Sbjct: 121 FE-AYKLFKEMASRGLALDTVCYTALIRGL 149
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 151/352 (42%), Gaps = 24/352 (6%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
TV ++ F + + +A + +GCV N Y I ALS + A +
Sbjct: 199 TVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLL 258
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
E+M G PD + +I CK G+ EA ++ + + +L+ LC+
Sbjct: 259 EEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRM 318
Query: 316 DETVKLALDMLDDFSGEARKYAIK---PFSSVIRSLCRMKDVHG----AKTLLSK-MISE 367
+ EAR K P + + +L V G AK LL K M+
Sbjct: 319 GKV------------DEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIA 366
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P FN +I K G + A+E L M +G +P+V TYT L+ G+ G EEA
Sbjct: 367 GFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEA 426
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
+++N L+ V Y+ LI CK + AL++ EM G +P++ +N LI
Sbjct: 427 SKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYG 486
Query: 488 LCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAVKELEEDAIENGEALV 538
LC K A L DM L+G+ N +T LI A LE I+ + LV
Sbjct: 487 LC-KNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLE--LIQQADKLV 535
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 141/321 (43%), Gaps = 2/321 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N +I K G +A E ++ G N TY I+ ++ F+ A V M
Sbjct: 375 FNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMS 434
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
G ++ +I CK GK ++A +Y K P LI LC+ D+ +
Sbjct: 435 AKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDK-M 493
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
+ AL + D E ++++I + R++ + A L+ +M G P N +N +
Sbjct: 494 EEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGL 553
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I A K G + +++ M + P + + L++ + G++ +A + L + +
Sbjct: 554 IKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGL 613
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
VTY++LI G CK+ F AL L N ++ G+ P+ YN LI C + L + A
Sbjct: 614 TPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGL-FNDAC 672
Query: 500 KLLEDMRLKGLHLNGITRALI 520
+LL G N IT +++
Sbjct: 673 QLLFKGVSNGFIPNEITWSIL 693
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 111/255 (43%), Gaps = 1/255 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI K GK + A +++ + GC + T+ I L + + A + M+
Sbjct: 446 NCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLL 505
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G + ++ +I F + ++A + R + LI +LC+ T K
Sbjct: 506 EGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEK 565
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
L +++ GE +I + +I S CR V+ A L MI G P +NS+I
Sbjct: 566 -CLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLI 624
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ K G A+ + ++++G+ PD TY L+S Y G +AC++L + N
Sbjct: 625 NGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFI 684
Query: 441 LSPVTYHTLIRGYCK 455
+ +T+ LI + K
Sbjct: 685 PNEITWSILINYFVK 699
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M SRG+ P VYT+ +M + +++ AC +L + K+ + + Y LI +
Sbjct: 191 MLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNR 250
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLK 508
+ A+KLL EM +G +P+V +N +I LC KA A KL + M L+
Sbjct: 251 VNEAMKLLEEMFLMGCEPDVQTFNDVIHGLC-KAGRIHEAAKLHDRMLLR 299
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 165/380 (43%), Gaps = 24/380 (6%)
Query: 138 VLETPLVLGE--------NLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGE 189
VLE L+LG+ NL + W+ + +C + E L D G
Sbjct: 205 VLEAGLLLGKVIQRGMSINLFTYNIWI---------RGLCEAGRLPEAVRLVD-----GM 250
Query: 190 KEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
+ V V N LI K + A + + GC+ + TY I+ + +
Sbjct: 251 RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQ 310
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A + + + G +PD +I+ C G + A ++ A+ K + P V L+
Sbjct: 311 EATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLV 370
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
LC + + AL ++++ + E I+ ++ VI LC+M ++ A +++ I +G
Sbjct: 371 KGLCLQGLILH-ALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGY 429
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
P FN++I Y K + A+++++ M G+ PD TY +++G G++ E E
Sbjct: 430 LPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNE 489
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
E +P+TY+ LI +C+ + + A K++ +M G+ P+ +N LI C
Sbjct: 490 TFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFC 549
Query: 490 LKALDWRTAEKLLEDMRLKG 509
D A L + + KG
Sbjct: 550 RNG-DLEGAYLLFQKLEEKG 568
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 140/344 (40%), Gaps = 44/344 (12%)
Query: 204 IALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGS 263
I +++ G+ + A + F + + C Y ++AL D A V +M+ G
Sbjct: 60 IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 119
Query: 264 LPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKL 321
PD + FC + H+ L R P + VA+ ++ L T
Sbjct: 120 SPDLHTHTIRLRSFCLTAR---PHIALRLLRA---LPHRGAVAYCTVVCGLYAHGHTHD- 172
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG------------- 368
A + D + F+ V+ +LC+ DV A LL K+I G
Sbjct: 173 ARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIR 232
Query: 369 ---------------------PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
P +N++I K AM L+ M ++G PD
Sbjct: 233 GLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPD 292
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
+TY ++ GY ++EA E+L +A VTY +LI G C + + AL+L N
Sbjct: 293 DFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFN 352
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH 511
E + G++P++ YN L++ LCL+ L A +++ +M +G H
Sbjct: 353 EAQAKGIKPDIVVYNSLVKGLCLQGLILH-ALQVMNEMAEEGCH 395
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 123/297 (41%), Gaps = 9/297 (3%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G + A E+FN+ G + Y ++ L + + A V +M E G PD +
Sbjct: 342 GDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTY 401
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
+I+ CK G +A VV A K P LI C+ +L LD
Sbjct: 402 NIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCK-----RLKLDSALQLV 456
Query: 331 GEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
+Y I P ++SV+ LC+ V+ +MI +G P +N +I + ++
Sbjct: 457 ERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRS 516
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
M A +++ M GL PD ++ L+ G+ G +E A + + ++ + T+
Sbjct: 517 NKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTF 576
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
+TLI + A K+ +EM G + + Y LI C A R L+E
Sbjct: 577 NTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVE 633
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 137/319 (42%), Gaps = 5/319 (1%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
V ++L+K +C + + ++ E+ E E ++ N +I K+G A V
Sbjct: 365 VYNSLVKGLCL---QGLILHALQVMNEMAE-EGCHPDIQTYNIVINGLCKMGNISDATVV 420
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
N G + + T+ I+ +R D A + E+M E G PD+ +++ CK
Sbjct: 421 MNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCK 480
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
GK E + + K +P LI + C+ ++ ++ A ++ S E
Sbjct: 481 AGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNK-MEEASKVIVKMSQEGLHPDAV 539
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
F+++I CR D+ GA L K+ +G FN++I A+S +M A ++ M
Sbjct: 540 SFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEM 599
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
S+G + D YTY L+ G ++ A L E K S T+ +I
Sbjct: 600 LSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRV 659
Query: 460 DCALKLLNEMKDVGVQPNV 478
A+ +++ M +GV P V
Sbjct: 660 FQAVGIIHIMVKIGVVPEV 678
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 7/190 (3%)
Query: 338 IKP-FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
I P + + IR+ R + A +M PP +N+++ A A A ++
Sbjct: 52 IHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVY 111
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
M + G+ PD++T+T + + + A +L V Y T++ G
Sbjct: 112 VRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHR----GAVAYCTVVCGLYAH 167
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A +L ++M V PN+ +NK++ +LC + D A LL + +G+ +N T
Sbjct: 168 GHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRG-DVLEAGLLLGKVIQRGMSINLFT 226
Query: 517 RAL-IRAVKE 525
+ IR + E
Sbjct: 227 YNIWIRGLCE 236
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 137/286 (47%), Gaps = 7/286 (2%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N LI F K AA F + G N TY I LS D A ++ +KM+
Sbjct: 276 FNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMV 335
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---D 316
G P+ +I+ FCK KEA ++ E+ + P +I + C+ +
Sbjct: 336 GLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMME 395
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
E L MLD E + ++ +I LCR ++V AK LL++M + +
Sbjct: 396 EGFALHNSMLD----EGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTY 451
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N +I + K G+ + A ++L M + G+KP+ TY LM GY G ++ A ++ + +K
Sbjct: 452 NILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEK 511
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
R + VTY+ LI+G+CK + + A +LLNEM + G+ PN Y+
Sbjct: 512 EGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYD 557
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 143/321 (44%), Gaps = 7/321 (2%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRR----KIFDWAWSVC 255
N I K GK A +V +G N TY I+ ++ K++ A ++
Sbjct: 203 FNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYR-ADAIL 261
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
++M+ P+ +I FCK A + + + + P LI+ L
Sbjct: 262 KEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNN 321
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ + A+ + D G K I F+++I C+ K + A+ L + + P
Sbjct: 322 GK-LDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAIT 380
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
FN++I A+ KAG M + M G+ P+V TY L++G + A ++LNE +
Sbjct: 381 FNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEME 440
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+ VTY+ LI G+CK E A KLL EM +VGV+PN YN L+ C++ +
Sbjct: 441 NYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEG-NL 499
Query: 496 RTAEKLLEDMRLKGLHLNGIT 516
+ A K+ M +G N +T
Sbjct: 500 KAALKVRTQMEKEGKRANVVT 520
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 125/271 (46%), Gaps = 40/271 (14%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
++S KG + E VY ++++ P + I+ LC+ + K A D+++D
Sbjct: 171 LLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNK-AEDVIEDIKAW 229
Query: 333 ARKYAIKPFSSVIRSLCR---MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
I ++++I C+ ++ A +L +M++ P FN++I + K ++
Sbjct: 230 GFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENV 289
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC--------------------- 428
A + M+ +GLKP++ TY L++G +N G+++EA
Sbjct: 290 LAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNAL 349
Query: 429 -------EILNEAKK-----NHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGV 474
+++ EA+K L P +T++T+I +CK + L N M D G+
Sbjct: 350 INGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGI 409
Query: 475 QPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
PNV YN LI LC + + R A+KLL +M
Sbjct: 410 FPNVSTYNCLIAGLC-RNQNVRAAKKLLNEM 439
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 3/157 (1%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
K ++ + ++ +L + + + + +MI P FN I+ KAG + A +
Sbjct: 162 KLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAED 221
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGY---ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
+++ +++ G P++ TY L+ G+ + G+M A IL E N + +T++TLI
Sbjct: 222 VIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLID 281
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
G+CK E A EM+ G++PN+ YN LI L
Sbjct: 282 GFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGL 318
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 83/200 (41%), Gaps = 19/200 (9%)
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV---------------- 379
Y ++ V+ L K ++ L K++ ++VF+S+
Sbjct: 76 YGLETTGKVLHLLANSKKYSKVRSFLDKLVKNEKHTVSSVFHSLLLGGDRPCANALITDM 135
Query: 380 -ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+ AY ++ A E+ + ++ G K + + L+S G + E + E K
Sbjct: 136 LVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRR 195
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK--ALDWR 496
+ + T++ I G CK + + A ++ ++K G PN+ YN LI C K A
Sbjct: 196 IQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMY 255
Query: 497 TAEKLLEDMRLKGLHLNGIT 516
A+ +L++M + N IT
Sbjct: 256 RADAILKEMLANKICPNEIT 275
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 132/293 (45%), Gaps = 1/293 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V L +I L + AF K G + T+ I L A + +
Sbjct: 105 VYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFD 164
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
KMI G P+ G +I+ CK G A + + P V + LI SLC+ D
Sbjct: 165 KMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCK-D 223
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
V A ++ + + I ++S+I LC++ + TL+++M+ P
Sbjct: 224 RQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTL 283
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N+V+ A K G + A +++ +M RG++P+V TY LM G+ +++ A ++ +
Sbjct: 284 NTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVH 343
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ ++Y+TLI GYCK++ D A+ L EM + PN YN LI LC
Sbjct: 344 KDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLC 396
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 145/341 (42%), Gaps = 8/341 (2%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V + + LI K + AF +F++ G N TY I L + + ++
Sbjct: 210 VVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMN 269
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M+++ +PD + ++ CK G EAH V + + + P L+ C +
Sbjct: 270 EMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRN 329
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
E V +A+ + D + + ++++I C+++ V A L +M + P +
Sbjct: 330 E-VDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTY 388
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N++I G + A+ + M +RG PD+ TY L +++A +L +
Sbjct: 389 NTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEG 448
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
++ Y T++ G C+ E + A L + + G+QPNV YN +I LC + L
Sbjct: 449 SNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGL-LA 507
Query: 497 TAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIENGEAL 537
A KL +M G N T LI + N EAL
Sbjct: 508 EASKLFSEMNKNGCSPNDCTYNLI------TRGFLRNNEAL 542
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 126/272 (46%), Gaps = 8/272 (2%)
Query: 248 FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY--PPQS-V 304
D A S +M+ P + ++++ K K + +L+R+ + PP
Sbjct: 51 LDEALSTFNRMLHKQPPPSTVDFNRLLTSI---AKTKHHSTLLSLSRQMDSFGIPPDVYT 107
Query: 305 VAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM 364
+A +I+SLC + V A L + F+++IR LC + A L KM
Sbjct: 108 LAIVINSLCHLNR-VDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKM 166
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
I EG P + ++I+ K G+ + A+ +L+ M +P+V ++ L+ Q+
Sbjct: 167 IGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQV 226
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
EA I +E + VTY++LI G CKL E+ L+NEM D + P+V N +
Sbjct: 227 TEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTV 286
Query: 485 IQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ +LC + + A +++ M +G+ N +T
Sbjct: 287 VDALCKEGM-VAEAHDVVDMMIHRGVEPNVVT 317
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 94/231 (40%), Gaps = 1/231 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI + K+ A +F + N TY I L A S+ +M+
Sbjct: 354 NTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVA 413
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G +PD + + CK +A + P + ++ +C+ E ++
Sbjct: 414 RGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGE-LE 472
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A D+ + S + + + ++ +I LC+ + A L S+M G P + +N +
Sbjct: 473 DARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLIT 532
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+ + + +E+L+ M +RG DV T T L+ ++ G + +IL
Sbjct: 533 RGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQIL 583
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 143/321 (44%), Gaps = 3/321 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I K G A +FN+ G A+ TY I L +D + +MI
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+PD +I F K GK EA +Y + + P LI C+E+ + A
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN-CLHEA 369
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
M D + + I +S +I S C+ K V L ++ S+G P +N+++
Sbjct: 370 NQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLG 429
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ ++G + A E+ + M SRG+ P V TY L+ G + G++ +A EI + +K+ L
Sbjct: 430 FCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLG 489
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
Y+ +I G C + D A L + D GV+P+V YN +I LC K A+ L
Sbjct: 490 IGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKG-SLSEADMLF 548
Query: 503 EDMRLKGLHLNGIT-RALIRA 522
M+ G + T LIRA
Sbjct: 549 RKMKEDGCTPDDFTYNILIRA 569
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 166/383 (43%), Gaps = 24/383 (6%)
Query: 168 ICSSVGKKEVYALWDIV------KEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+CS+V + + Y D+V E+ E + T+ I+ I + + K AF V
Sbjct: 76 LCSAVARTKQY---DLVLGFCKGMELNGIEHDMYTMTIM---INCYCRKKKLLFAFSVLG 129
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ G + T+ + A ++ ++M+E PD V +I+ C G
Sbjct: 130 RAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKG 189
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ EA V+ E P + +++ LC+ + LALD+ K ++ +
Sbjct: 190 RVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA-LALDLFRKMEERNIKASVVQY 248
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
S VI SLC+ A +L ++M +G ++S+I G +ML+ M
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
R + PDV T++ L+ + G++ EA E+ NE +TY++LI G+CK
Sbjct: 309 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 368
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT----- 516
A ++ + M G +P++ Y+ LI S C KA +L ++ KGL N IT
Sbjct: 369 ANQMFDLMVSKGCEPDIVTYSILINSYC-KAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 517 -----RALIRAVKELEEDAIENG 534
+ A KEL ++ + G
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRG 450
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 122/298 (40%), Gaps = 1/298 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V + LI +F K GK A E++N+ G + TY I+ + A + +
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD 374
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
M+ G PD +I+ +CK + + ++ K + P L+ CQ
Sbjct: 375 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSG 434
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ + A ++ + ++ + ++ LC +++ A + KM G ++
Sbjct: 435 K-LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIY 493
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N +I A + A + + +G+KPDV TY ++ G G + EA + + K+
Sbjct: 494 NIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
+ TY+ LIR + +++L+ EMK G + +I L + LD
Sbjct: 554 DGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLD 611
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 3/149 (2%)
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
V+ A L MI P P FN + SA ++ + K M G++ D+YT T
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
+++ Y ++ A +L A K +T+ TL+ G+C A+ L++ M ++
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 474 VQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
+P++ + LI LCLK R +E L+
Sbjct: 171 QRPDLVTVSTLINGLCLKG---RVSEALV 196
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 169/357 (47%), Gaps = 12/357 (3%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVK-EIGEKEKGVLTVEILNELIAL-FSKLGKGKAAF 217
V + L+ +C + K V W+ V+ + G +KG+ E+ + L K+ + +
Sbjct: 263 VYNVLIHGLCKN---KRV---WEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGA 316
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRR-KIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
V ++ + G V + +E L R+ K+ D A+ + ++ + G++P +I+
Sbjct: 317 GVMDEMIELGFVPTEAALSSLVEGLRRKGKVVD-AFDLVNRVKKVGAMPSLFVYNALINS 375
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
CK GK EA +++ EK + + LI S C+ + + A+ L K
Sbjct: 376 LCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGK-LDTAIHFLGKMIMAGIKI 434
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ P++S+I C++ ++ A + +MI +G P + S+IS Y G + A +
Sbjct: 435 TVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLY 494
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
M +G+ P+ YT+T L+S +M +A + +E + + + VTY+ +I G+CK
Sbjct: 495 HEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKE 554
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
A +LLN+M G+ P+ Y LI SLC A+K ++D+ + LN
Sbjct: 555 GNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCE-AKKFIDDLHREHFKLN 610
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 150/333 (45%), Gaps = 3/333 (0%)
Query: 174 KKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQE 233
K +V +D+V + +K + ++ + N LI K GK A +F + G+ G AN
Sbjct: 344 KGKVVDAFDLVNRV-KKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDV 402
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
TY I++ RR D A KMI G +I+ CK G A +
Sbjct: 403 TYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEM 462
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
+K + P LIS C + + + A + + +G+ F+++I +L R
Sbjct: 463 IDKGLKPTVVSYTSLISGYCNKGK-LHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANR 521
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
+ A L +M+ + P +N +I + K G+ A E+L M +GL PD YTY
Sbjct: 522 MTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRP 581
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
L+S + G++ EA + +++ + H +L+ + Y L+ GYCK AL + EM G
Sbjct: 582 LISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRG 641
Query: 474 VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
V ++ Y LI +K D LL++M
Sbjct: 642 VDMDLVCYAVLIDGT-IKEQDTSAVFGLLKNMH 673
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 152/384 (39%), Gaps = 71/384 (18%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
TV LI+ + GK AF ++++ G N T+ I AL R A+ +
Sbjct: 470 TVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLF 529
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
++M+E +P+ +I CK G +A + +K + P LISSLC
Sbjct: 530 DEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCST 589
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLC---RMKDVHGAKT------------- 359
+ A +DD E K +S+++ C R++D G
Sbjct: 590 GRVCE-AKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVC 648
Query: 360 -------------------LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
LL M + P ++ S+I YSKAG + A + +M
Sbjct: 649 YAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMI 708
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEA-------------------CEILN--------- 432
G P++ TYT L++ G M++A C L+
Sbjct: 709 DEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSME 768
Query: 433 EAKKNHSRL------SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
+A + H+ + + V+Y+ L+RG+CKL + A KLL+EM D + P+ Y+ +I
Sbjct: 769 KAVQLHNDMLKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIY 828
Query: 487 SLCLKALDWRTAEKLLEDMRLKGL 510
C + + A + + M KGL
Sbjct: 829 QCCRRG-NLDGAIEFWDTMLNKGL 851
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 109/254 (42%), Gaps = 37/254 (14%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
I +I +SK G K AF +++ D GC N TY I L + + D A + ++M
Sbjct: 683 IYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEM 742
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+ + S P+ +++ C + LARE M ++
Sbjct: 743 LVSNSTPNH------VTYCC---------FLDHLAREGSM-----------------EKA 770
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
V+L DML Y I ++R C++ V A LL +MI P +++
Sbjct: 771 VQLHNDMLKGLLANTVSYNI-----LVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYST 825
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I + G++ A+E M ++GLKPD Y L+ G G++ +A E+ ++ +
Sbjct: 826 IIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRG 885
Query: 439 SRLSPVTYHTLIRG 452
+ + T+ +L G
Sbjct: 886 VKPNQATHKSLSHG 899
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 120/267 (44%), Gaps = 3/267 (1%)
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A VC +M++ G D +I K + ++++ P + + +I
Sbjct: 630 ALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMID 689
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
+ +VK A + D E I ++++I LC+ + A+ L +M+
Sbjct: 690 GYSKAG-SVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNST 748
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P + + + ++ G M A+++ M +GL + +Y L+ G+ G++EEA ++
Sbjct: 749 PNHVTYCCFLDHLAREGSMEKAVQLHNDML-KGLLANTVSYNILVRGFCKLGRVEEATKL 807
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
L+E N +TY T+I C+ D A++ + M + G++P+ YN LI C+
Sbjct: 808 LDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCI 867
Query: 491 KALDWRTAEKLLEDMRLKGLHLNGITR 517
A + A +L +DM +G+ N T
Sbjct: 868 -AGELGKAFELRDDMIRRGVKPNQATH 893
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 38/218 (17%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
++ V+ L +++ V L +++S G P ++ +VI ++ + + A EM++
Sbjct: 193 VRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQ 252
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M S L +V Y L+ G ++ EA EI N + S VTY TL+ G CK++
Sbjct: 253 RMESSDL--NVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQ 310
Query: 458 EFDC-----------------------------------ALKLLNEMKDVGVQPNVDEYN 482
EF+ A L+N +K VG P++ YN
Sbjct: 311 EFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYN 370
Query: 483 KLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
LI SLC K + AE L ++M KGL N +T +++
Sbjct: 371 ALINSLC-KDGKFDEAELLFKEMGEKGLCANDVTYSIL 407
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 109/268 (40%), Gaps = 53/268 (19%)
Query: 154 KWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKG 213
K + + ++D KA SV K+ + +WDI+ + G V ++NEL K G
Sbjct: 681 KVIYTSMIDGYSKA--GSV--KKAFGIWDIMIDEGCTPNIVTYTTLINEL----CKAGLM 732
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
A ++ + N TY ++ L+R + A + M++ G L ++ +
Sbjct: 733 DKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNIL 791
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEA 333
+ FCK G+ +EA KL +M+D+
Sbjct: 792 VRGFCKLGRVEEA--------------------------------TKLLDEMIDN----- 814
Query: 334 RKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
AI P +S++I CR ++ GA M+++G P +N +I AG++
Sbjct: 815 ---AIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGEL 871
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
A E+ M RG+KP+ T+ L G
Sbjct: 872 GKAFELRDDMIRRGVKPNQATHKSLSHG 899
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 156/312 (50%), Gaps = 4/312 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI-EALSRRKIFDWAWSVCEKMIET 261
LI K+G+ KAA E+ + D V Y TI + + + K + A+ + + +
Sbjct: 304 LINGLCKVGETKAALELLRR-NDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSK 362
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
PD +IS FC GK K+A ++ K + P + L+ C+ D +K
Sbjct: 363 RIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCK-DGNIKE 421
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A ++L ++ K + +SS++ C + +V+ A+++ + M G +N +I+
Sbjct: 422 AKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMIN 481
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
+ K + AM++ K M + + PDV TY+ L+ G G++ A E+++E +
Sbjct: 482 GFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQP 541
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+TY++++ CK D A+ LL ++K G++P+++ Y L++ LC ++ A K+
Sbjct: 542 DIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLC-QSGKLEDARKV 600
Query: 502 LEDMRLKGLHLN 513
ED+ +KG +L+
Sbjct: 601 FEDLLVKGYNLD 612
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 133/261 (50%), Gaps = 4/261 (1%)
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
K+++ G PD+ + I FC G+ +A + + Q LI+ LC+
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVG 312
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
ET K AL++L G+ + + ++++I +C+ K V+ A L S+ +S+ P +
Sbjct: 313 ET-KAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTY 371
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N++IS + G + A+++ M S+ + PDVYT++ L+ G+ G ++EA +L K
Sbjct: 372 NALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMK 431
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC-LKALDW 495
+ VTY +L+ GYC + E + A + N M GV NV YN +I C +K +D
Sbjct: 432 QSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVD- 490
Query: 496 RTAEKLLEDMRLKGLHLNGIT 516
A KL ++M K + + IT
Sbjct: 491 -EAMKLFKEMHHKQIFPDVIT 510
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 153/323 (47%), Gaps = 3/323 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI+ F +GK K A ++FNK + + T+ ++ + A +V M++
Sbjct: 372 NALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMK 431
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
PD ++ +C + +A ++ + + +I+ C+ + V
Sbjct: 432 QSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKI-KMVD 490
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A+ + + + + +SS+I LC+ + A L+ +M G P +NS++
Sbjct: 491 EAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSIL 550
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
A K + A+ +L ++ +G++PD+ TYT L+ G G++E+A ++ +
Sbjct: 551 DALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYN 610
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
L Y +I+G+C FD AL LL++M++ G P+ Y +I SL K + AEK
Sbjct: 611 LDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKD-ENDMAEK 669
Query: 501 LLEDMRLKGLHLNGITRALIRAV 523
LL +M ++GL L +T L+ ++
Sbjct: 670 LLREMIMRGL-LVALTDDLVASI 691
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 127/261 (48%), Gaps = 2/261 (0%)
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+K+I G D G +I+ CK G+ K A + K + P + +I +C+
Sbjct: 287 DKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCK- 345
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
D+ V A D+ + + + ++++I C + + A L +KM S+ P
Sbjct: 346 DKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYT 405
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
F+ ++ + K G++ A +L +M + +KPDV TY+ LM GY ++ +A I N
Sbjct: 406 FSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMS 465
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+ +Y+ +I G+CK++ D A+KL EM + P+V Y+ LI LC K+
Sbjct: 466 HRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLC-KSGRI 524
Query: 496 RTAEKLLEDMRLKGLHLNGIT 516
A +L+++M +G + IT
Sbjct: 525 SYALELVDEMHYRGQQPDIIT 545
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 85/208 (40%), Gaps = 1/208 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V+ N +I F K+ A ++F + + TY I+ L + +A + +
Sbjct: 473 VQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVD 532
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M G PD I+ CK +A + T + + + P + L+ LCQ
Sbjct: 533 EMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSG 592
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ ++ A + +D + + ++ +I+ C A LLSKM G P +
Sbjct: 593 K-LEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTY 651
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGL 404
+I + + + A ++L+ M RGL
Sbjct: 652 EIIILSLFEKDENDMAEKLLREMIMRGL 679
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 152/332 (45%), Gaps = 10/332 (3%)
Query: 191 EKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDW 250
+ G + +L+ L+ + K G+ + A EV D G + ++ L R
Sbjct: 168 DSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMAL 227
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
W V E M+ G PD +I +CK + A V RE+ LI+
Sbjct: 228 LWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIA 287
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMIS 366
LC+ A++ F + Y + P + ++I LC+ + + AK LL +M
Sbjct: 288 GLCRSG-----AVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSC 342
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
P V+ ++I + + G+ A +M+K M + G++P+ TY L+ G GQM+
Sbjct: 343 AELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDR 402
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A +L + ++ R +TY+ +I G+ + A +LL+EM++ G+ PNV Y+ +I
Sbjct: 403 ASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIH 462
Query: 487 SLCLKALDWRTAEKLLEDMRLKGLHLNGITRA 518
LC ++ + A LLE+M KGL N A
Sbjct: 463 GLC-QSGEPEKASDLLEEMTTKGLKPNAFVYA 493
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 155/345 (44%), Gaps = 19/345 (5%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + K+ + A +V + + GC N TY I L R + A+ + M + G
Sbjct: 250 LIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYG 309
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETV 319
+PD G +I+ CK ++ EA + ++ P V A LI +E DE
Sbjct: 310 LVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAF 369
Query: 320 KLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
K+ +M+ ++P + +++R LC+M + A LL +M+ + P
Sbjct: 370 KMIKEMV--------AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTIT 421
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N +I + + A +L M + G+ P+VYTY+ ++ G G+ E+A ++L E
Sbjct: 422 YNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMT 481
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+ + Y LI GYC+ A ++ ++M V V P++ YN LI L K
Sbjct: 482 TKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLS-KVGRV 540
Query: 496 RTAEKLLEDMRLKGLHLNGIT-RALIRAVKELEEDAIENGEALVE 539
+ K M+ +GL N T LI L+ +E+ E LV+
Sbjct: 541 EESTKYFAQMQERGLLPNEFTYSGLIHGY--LKNGDLESAEQLVQ 583
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 141/310 (45%), Gaps = 16/310 (5%)
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
K AF + ++ + G N TY I L + + A + E+M G P++ +
Sbjct: 436 KDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPL 495
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPP---QSVVAFLISSLCQEDETVKLALDMLDDFS 330
IS +C+ G A ++ + + P + + F +S + + +E+ K +
Sbjct: 496 ISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK--------YF 547
Query: 331 GEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
+ ++ + P +S +I + D+ A+ L+ +M+ G P + ++ ++ +Y K+
Sbjct: 548 AQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKS 607
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
D+ K M +G+ D Y L+ ++ G ME A +L+ +KN S Y
Sbjct: 608 DDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVY 667
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
+LI G CK + + A +L+EM GV PN+ YN LI LC K+ D A + +
Sbjct: 668 SSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLC-KSGDISYARNVFNSIL 726
Query: 507 LKGLHLNGIT 516
KGL N +T
Sbjct: 727 AKGLVPNCVT 736
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 134/316 (42%), Gaps = 20/316 (6%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI+ + + G A E+F+K + + Y I LS+ + + +M E G
Sbjct: 495 LISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG 554
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE----- 317
LP+ +I + K G + A + + + P + L+ S + D+
Sbjct: 555 LLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVS 614
Query: 318 -TVKLALD---MLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
T K LD MLD+ R Y I +I +L ++ A +LS + G P
Sbjct: 615 STFKSMLDQGVMLDN-----RIYGI-----LIHNLSSSGNMEAAFRVLSGIEKNGSVPDV 664
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
V++S+IS K D A +L M +G+ P++ Y L+ G G + A + N
Sbjct: 665 HVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNS 724
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
+ VTY +LI G CK+ + A L NEM G+ P+ Y+ L C A
Sbjct: 725 ILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTG-CSSAG 783
Query: 494 DWRTAEKLLEDMRLKG 509
D A L+E+M L+G
Sbjct: 784 DLEQAMFLIEEMFLRG 799
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 135/316 (42%), Gaps = 3/316 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI SK+G+ + + + F + + G + N+ TY I + + A + ++M++
Sbjct: 528 NSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLD 587
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
TG P+ ++ + K ++ + ++ + + LI +L ++
Sbjct: 588 TGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNL-SSSGNME 646
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A +L + +SS+I LC+ D A +L +M +G P +N++I
Sbjct: 647 AAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALI 706
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
K+GD++ A + + ++GL P+ TYT L+ G G + A + NE
Sbjct: 707 DGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGIT 766
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
Y L G + + A+ L+ EM G ++ +N L+ C + T K
Sbjct: 767 PDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETL-K 824
Query: 501 LLEDMRLKGLHLNGIT 516
LL + +GL N +T
Sbjct: 825 LLHVIMGRGLVPNALT 840
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 124/307 (40%), Gaps = 16/307 (5%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ + A ++ + G N Y I R A + +KM + LPD
Sbjct: 468 GEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCY 527
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLD 327
+I K G+ +E+ + +E+ + P + + LI + + +L MLD
Sbjct: 528 NSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLD 587
Query: 328 DFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAY 383
+KP + ++ S + D+ + M+ +G N ++ +I
Sbjct: 588 T--------GLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNL 639
Query: 384 SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
S +G+M A +L + G PDV+ Y+ L+SG E+A IL+E K +
Sbjct: 640 SSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNI 699
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
V Y+ LI G CK + A + N + G+ PN Y LI C K D A L
Sbjct: 700 VCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSC-KVGDISNAFYLYN 758
Query: 504 DMRLKGL 510
+M G+
Sbjct: 759 EMLATGI 765
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/344 (20%), Positives = 130/344 (37%), Gaps = 54/344 (15%)
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
F D G + + Y I LS + A+ V + + GS+PD +IS C
Sbjct: 616 TFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLC 675
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
K ++A + +K + P LI LC+ + + A ++ + +
Sbjct: 676 KTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGD-ISYARNVFNSILAKGLVPNC 734
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV----------------------- 375
++S+I C++ D+ A L ++M++ G P V
Sbjct: 735 VTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEE 794
Query: 376 -----------FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
FN+++ + K G M +++L ++ RGL P+ T ++SG + G++
Sbjct: 795 MFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKL 854
Query: 425 EEACEILNEAKK------------------NHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
E I E ++ N ++ +IR +CK D AL L
Sbjct: 855 SEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLR 914
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+ + Y ++ +LC K A LL++M +G+
Sbjct: 915 DVIVAKSAPMGCSSYLAIVDNLCRKG-KLSEALNLLKEMDKRGI 957
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 90/206 (43%), Gaps = 29/206 (14%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPP-----------------GNAVFNSVISAY 383
F+ + SLC + A LL KMI P P AV + ++ Y
Sbjct: 125 FAHLAMSLCAGSLFNLANGLLIKMIRAYPSPPVVLASIHRALSDSGHRSPAVLDVLVDTY 184
Query: 384 SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME---EACEILNEAKKNHSR 440
K+G + A E++ +MR RG+ P + L+ M + E + A
Sbjct: 185 KKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAG----- 239
Query: 441 LSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
+SP TY TLI YCK+ EFD A K+L EM++ G N YN LI LC ++ A
Sbjct: 240 ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLC-RSGAVEEA 298
Query: 499 EKLLEDMRLKGLHLNGITR-ALIRAV 523
+DM GL +G T ALI +
Sbjct: 299 FGFKKDMEDYGLVPDGFTYGALINGL 324
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/326 (18%), Positives = 121/326 (37%), Gaps = 57/326 (17%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
V +L+ +C + +++ + + D + + G + N LI K G A V
Sbjct: 666 VYSSLISGLCKTADREKAFGILDEMSKKGVDP----NIVCYNALIDGLCKSGDISYARNV 721
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDS------------ 267
FN G V N TY I+ + A+ + +M+ TG PD+
Sbjct: 722 FNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSS 781
Query: 268 ----------------------EKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVV 305
++ FCK GK +E + + + + P +
Sbjct: 782 AGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTI 841
Query: 306 AFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSV------------------IRS 347
+IS L + + ++ + + + + A + FSS+ IR
Sbjct: 842 ENIISGLSEAGKLSEVH-TIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRD 900
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
C+ ++ A L ++++ P G + + +++ + G ++ A+ +LK M RG+ P
Sbjct: 901 HCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPS 960
Query: 408 VYTYTGLMSGYANGGQMEEACEILNE 433
L++ G ++E +L+
Sbjct: 961 ENQCLILLTNLHTSGYIQEHNTVLDN 986
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 151/356 (42%), Gaps = 6/356 (1%)
Query: 161 VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVF 220
+ +L+ C + +L D + EIG K + N +I K + AF+ F
Sbjct: 158 IGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPD----IVAYNAIIDSLCKTKRVNDAFDFF 213
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ G N TY + L + A + MI+ P+ ++ F K
Sbjct: 214 KEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKN 273
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
GK EA ++ + P + L++ LC D + A M D + +
Sbjct: 274 GKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDR-IDEANQMFDLMVSKGCLADVVS 332
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++++I C+ K V L +M G +N++I + +AGD+ A E M
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 392
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G+ PD++TY L+ G + G++E+A I + +K L VTY T+IRG CK + +
Sbjct: 393 FFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVE 452
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A L + G++P++ Y ++ LC K L E L M+ +GL N T
Sbjct: 453 EAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL-LHEVEALYTKMKQEGLMKNDCT 507
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 100/216 (46%), Gaps = 7/216 (3%)
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A+D+ D +I F+ ++ ++ ++K +L KM G FN VI+
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
+ ++ A+ +L M G +PD T L++G+ ++ +A ++++ + +
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
V Y+ +I CK + + A E++ G++PNV Y L+ LC + W A +L
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLC-NSSRWSDAARL 247
Query: 502 LEDMRLKGLHLNGITRALIRAVKELEEDAIENGEAL 537
L DM K + N IT + L + ++NG+ L
Sbjct: 248 LSDMIKKKITPNVITYS------ALLDAFVKNGKVL 277
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 84/169 (49%), Gaps = 3/169 (1%)
Query: 350 RMKDV--HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
R++D+ + A L S M+ P P FN ++SA K + + K M G++ D
Sbjct: 60 RLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRND 119
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
+YT+ +++ + Q+ A IL + K VT +L+ G+C+ A+ L++
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+M ++G +P++ YN +I SLC K A +++ KG+ N +T
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLC-KTKRVNDAFDFFKEIERKGIRPNVVT 227
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 1/165 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F+ VI C V A ++L KM+ G P S+++ + + ++ A+ ++ M
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G KPD+ Y ++ ++ +A + E ++ R + VTY L+ G C +
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
A +LL++M + PNV Y+ L+ + +K A++L E+M
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAF-VKNGKVLEAKELFEEM 286
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 154/321 (47%), Gaps = 9/321 (2%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWS--- 253
+ N+L+ + K G + ++ NK G N T+ I+ L R+ + + A S
Sbjct: 216 IATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVV 275
Query: 254 ----VCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
KM+ G PD II + K GK ++A + A+ K P + LI
Sbjct: 276 EAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLI 335
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
+CQ D + AL + ++ G+ K +I ++++I+ L + V A L++ M EG
Sbjct: 336 IGVCQ-DGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGM 394
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
P +N VI+ K G ++ A +L ++G PD++T+ L+ GY +M+ A
Sbjct: 395 SPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIG 454
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
IL+ + +TY++++ G CK + + ++ + + G PN+ YN LI+SLC
Sbjct: 455 ILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLC 514
Query: 490 LKALDWRTAEKLLEDMRLKGL 510
KA A LLE++R +GL
Sbjct: 515 -KARKVTEALDLLEEIRNRGL 534
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 115/286 (40%), Gaps = 29/286 (10%)
Query: 204 IALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGS 263
I F + + AA + N GC N Y I A+ + KM+ G
Sbjct: 153 IKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGI 212
Query: 264 LPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLAL 323
P K++ CK G +E + + + P I LC+ K L
Sbjct: 213 FPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCR-----KGVL 267
Query: 324 DMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAY 383
+ + EA Y L KM+++G P + +N++I Y
Sbjct: 268 EGANSKVVEAENY------------------------LHKMVNKGLEPDDFTYNTIIYGY 303
Query: 384 SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
SK G + A +LK + +G PD +TY L+ G G ++ A + EA + S
Sbjct: 304 SKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSI 363
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
V Y+TLI+G + AL+L+N+M G+ P++ YN +I LC
Sbjct: 364 VLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLC 409
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 138/311 (44%), Gaps = 9/311 (2%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
+ + GK + A +VF + Y C + +Y + L F+ A V +M G PD
Sbjct: 86 YGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPD 145
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
I FC+ + A + + V +IS +E+ V+ A ++
Sbjct: 146 VCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVE-AYELF 204
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
+ I F+ ++ LC+ + + LL+K++ G P FN I +
Sbjct: 205 NKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRK 264
Query: 387 G-------DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
G + A L M ++GL+PD +TY ++ GY+ G++++A IL +AK
Sbjct: 265 GVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGF 324
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
TY +LI G C+ + D AL L E G++P++ YN LI+ L + L + A
Sbjct: 325 VPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLK-AL 383
Query: 500 KLLEDMRLKGL 510
+L+ DM +G+
Sbjct: 384 QLMNDMSKEGM 394
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 121/293 (41%), Gaps = 37/293 (12%)
Query: 235 YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR 294
Y I+ LS++ + A + M + G PD +I+ CK G +A+ + A
Sbjct: 366 YNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAI 425
Query: 295 EKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDV 354
K P LI C+ + + A+ +LD + ++S++ LC+
Sbjct: 426 AKGYLPDIFTFNTLIDGYCKRLK-MDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKP 484
Query: 355 HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
++ +G P +N +I + KA +T A+++L+ +R+RGL PD ++ +
Sbjct: 485 EDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTV 544
Query: 415 MSGYANGGQMEEACEILNEAKKNHSRLSPV------------------------------ 444
+SG+ N G ++EA ++ ++ + V
Sbjct: 545 ISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKG 604
Query: 445 ------TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
TY +I G+CK+ + L + ++G P++ + ++I LC++
Sbjct: 605 CDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQ 657
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 117/281 (41%), Gaps = 10/281 (3%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I K+G A + N G + + T+ I+ +R D A + + M
Sbjct: 402 NLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWS 461
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD I++ CK K ++ + + EK P LI SLC+ + +
Sbjct: 462 HGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTE 521
Query: 321 LALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN-AV 375
ALD+L+ E R + P F +VI C D+ A L +M + A
Sbjct: 522 -ALDLLE----EIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVAT 576
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N +I+A+S+ DM A ++ M +G PD YTY ++ G+ G + + L +
Sbjct: 577 YNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEI 636
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
+ S T+ +I C A+ +++ M GV P
Sbjct: 637 EIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVP 677
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 3/177 (1%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+ S +R+ R V A + +M P +N++++ + G A ++ M+
Sbjct: 79 YVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMK 138
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G+ PDV T+T + + + A +LN L+ V Y T+I G+ + E +
Sbjct: 139 HEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYE-ENYQ 197
Query: 461 C-ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A +L N+M +G+ P++ +NKL+ LC K + EKLL + G+ N T
Sbjct: 198 VEAYELFNKMLRLGIFPHIATFNKLMHILCKKG-HLQEGEKLLNKVLKNGVCPNLFT 253
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 3/145 (2%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
++ C++ E Y L+ + + ++ + TV N +I FS+ A ++F++
Sbjct: 543 TVISGFCNNGDLDEAYQLF---RRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHE 599
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
GD GC + TY I+ + + + K IE G +P G++I+ C +
Sbjct: 600 MGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHR 659
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAF 307
EA + L + P V F
Sbjct: 660 VHEAVGIVHLMVRTGVVPEAVVTIF 684
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 149/324 (45%), Gaps = 10/324 (3%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+L+ L+ + K G+ + A EV D G + ++ L R W V E M
Sbjct: 49 VLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFM 108
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+ G PD +I +CK + A V RE+ LI+ LC+
Sbjct: 109 VGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSG-- 166
Query: 319 VKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
A++ F + Y + P + ++I LC+ + + AK LL +M P
Sbjct: 167 ---AVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVV 223
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
V+ ++I + + G+ A +M+K M + G++P+ TY L+ G GQM+ A +L +
Sbjct: 224 VYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQM 283
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
++ R +TY+ +I G+ + A +LL+EM++ G+ PNV Y+ +I LC ++ +
Sbjct: 284 VRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLC-QSGE 342
Query: 495 WRTAEKLLEDMRLKGLHLNGITRA 518
A LLE+M KGL N A
Sbjct: 343 PEKASDLLEEMTTKGLKPNAFVYA 366
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 156/345 (45%), Gaps = 19/345 (5%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + K+ + A +V + + GC N TY I L R + A+ + M + G
Sbjct: 123 LIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYG 182
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETV 319
+PD G +I+ CK ++ EA + ++ P V A LI +E DE
Sbjct: 183 LVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAF 242
Query: 320 KLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
K+ +M+ ++P + +++R LC+M + A LL +M+ + P
Sbjct: 243 KMIKEMV--------AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTIT 294
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N +I + + + A +L M + G+ P+VYTY+ ++ G G+ E+A ++L E
Sbjct: 295 YNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMT 354
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+ + Y LI GYC+ A ++ ++M V V P++ YN LI L K
Sbjct: 355 TKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLS-KVGRV 413
Query: 496 RTAEKLLEDMRLKGLHLNGIT-RALIRAVKELEEDAIENGEALVE 539
+ K M+ +GL N T LI L+ +E+ E LV+
Sbjct: 414 EESTKYFAQMQERGLLPNEFTYSGLIHGY--LKNGDLESAEQLVQ 456
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 142/310 (45%), Gaps = 16/310 (5%)
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
K AF + ++ + G N TY I L + + A + E+M G P++ +
Sbjct: 309 KDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPL 368
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPP---QSVVAFLISSLCQEDETVKLALDMLDDFS 330
IS +C+ G A ++ + + P + + F +S + + +E+ K +
Sbjct: 369 ISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK--------YF 420
Query: 331 GEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
+ ++ + P +S +I + D+ A+ L+ +M+ G P + ++ ++ +Y K+
Sbjct: 421 AQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKS 480
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
D+ K M +G+ D Y L+ ++ G ME A +L+E +KN S Y
Sbjct: 481 DDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVY 540
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
+LI G CK + + A +L+EM GV PN+ YN LI LC K+ D A + +
Sbjct: 541 SSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLC-KSGDISYARNVFNSIL 599
Query: 507 LKGLHLNGIT 516
KGL N +T
Sbjct: 600 AKGLVPNCVT 609
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 135/316 (42%), Gaps = 20/316 (6%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI+ + + G A E+F+K + + Y I LS+ + + +M E G
Sbjct: 368 LISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG 427
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE----- 317
LP+ +I + K G + A + + + P + L+ S + D+
Sbjct: 428 LLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVS 487
Query: 318 -TVKLALD---MLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
T K LD MLD+ R Y I +I +L ++ A +LS++ G P
Sbjct: 488 STFKSMLDQGVMLDN-----RIYGI-----LIHNLSSSGNMEAAFRVLSEIEKNGSVPDV 537
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
V++S+IS K D A +L M +G+ P++ Y L+ G G + A + N
Sbjct: 538 HVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNS 597
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
+ VTY +LI G CK+ + A L NEM G+ P+ Y+ L C A
Sbjct: 598 ILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTG-CSSAG 656
Query: 494 DWRTAEKLLEDMRLKG 509
D A L+E+M L+G
Sbjct: 657 DLEQAMFLIEEMFLRG 672
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 136/316 (43%), Gaps = 3/316 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI SK+G+ + + + F + + G + N+ TY I + + A + ++M++
Sbjct: 401 NSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLD 460
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
TG P+ ++ + K ++ + ++ + + LI +L ++
Sbjct: 461 TGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNL-SSSGNME 519
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A +L + + +SS+I LC+ D A +L +M +G P +N++I
Sbjct: 520 AAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALI 579
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
K+GD++ A + + ++GL P+ TYT L+ G G + A + NE
Sbjct: 580 DGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGIT 639
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
Y L G + + A+ L+ EM G ++ +N L+ C + + K
Sbjct: 640 PDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRG-KMQETLK 697
Query: 501 LLEDMRLKGLHLNGIT 516
LL + +GL N +T
Sbjct: 698 LLHVIMGRGLVPNALT 713
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 124/307 (40%), Gaps = 16/307 (5%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ + A ++ + G N Y I R A + +KM + LPD
Sbjct: 341 GEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCY 400
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLD 327
+I K G+ +E+ + +E+ + P + + LI + + +L MLD
Sbjct: 401 NSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLD 460
Query: 328 DFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAY 383
+KP + ++ S + D+ + M+ +G N ++ +I
Sbjct: 461 T--------GLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNL 512
Query: 384 SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
S +G+M A +L + G PDV+ Y+ L+SG E+A IL+E K +
Sbjct: 513 SSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNI 572
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
V Y+ LI G CK + A + N + G+ PN Y LI C K D A L
Sbjct: 573 VCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSC-KVGDISNAFYLYN 631
Query: 504 DMRLKGL 510
+M G+
Sbjct: 632 EMLATGI 638
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/342 (20%), Positives = 130/342 (38%), Gaps = 54/342 (15%)
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
F D G + + Y I LS + A+ V ++ + GS+PD +IS CK
Sbjct: 490 FKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCK 549
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
++A + +K + P LI LC+ + + A ++ + +
Sbjct: 550 TADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGD-ISYARNVFNSILAKGLVPNCV 608
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV------------------------ 375
++S+I C++ D+ A L ++M++ G P V
Sbjct: 609 TYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEM 668
Query: 376 ----------FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
FN+++ + K G M +++L ++ RGL P+ T ++SG + G++
Sbjct: 669 FLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLS 728
Query: 426 EACEILNEAKK------------------NHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
E I E ++ N ++ +IR +CK D AL L +
Sbjct: 729 EVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRD 788
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
+ Y ++ +LC K A LL++M +G
Sbjct: 789 VIVAKSAPMGCSSYLAIVDNLCRKG-KLSEALNLLKEMDKRG 829
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 90/199 (45%), Gaps = 27/199 (13%)
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPP-----------------GNAVFNSVISAYSKAGDM 389
S+C + A LL KMI P P AV + ++ Y K+G +
Sbjct: 4 SMCAGSLFNLANGLLIKMIRAYPSPPVVLASIHRALSDSGHRSPAVLDVLVDTYKKSGRV 63
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH--SRLSP--VT 445
A E++ +MR RGL P + L+ +A +L + ++ + +SP T
Sbjct: 64 QDAAEVVLMMRDRGLAPSIRCCNALLKDLLRA----DAMALLWKVREFMVGAGISPDVYT 119
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
Y TLI YCK+ EFD A K+L EM++ G N YN LI LC ++ A +DM
Sbjct: 120 YSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLC-RSGAVEEAFGFKKDM 178
Query: 506 RLKGLHLNGITR-ALIRAV 523
GL +G T ALI +
Sbjct: 179 EDYGLVPDGFTYGALINGL 197
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 159/353 (45%), Gaps = 6/353 (1%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
L+ A+C S + + + + E G V N LI F KLG A +FN+
Sbjct: 242 LVDALCKSARISDASLILEDMIEAGCAP----NVVTYNTLINGFCKLGNMDEAVVLFNQM 297
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
+ C + TY I+ +++ + ++M++ G P+ ++ K GK
Sbjct: 298 LENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKY 357
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
+A + + + P +I C+ + + LA ++ + I ++
Sbjct: 358 IDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQ-LDLAYELFQLMTDRGCLPDIYTYNI 416
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
+I CR + A+ LL +M G PP +NS++S KA + A E+ +++R+ G
Sbjct: 417 MISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGG 476
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
DV T + L+ G ++++A ++L E ++N S V Y LI G+CK ++ D +L
Sbjct: 477 YFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSL 536
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+EM D G P V Y+ +I LC K+ R LL+ M +G+ + I
Sbjct: 537 AFFSEMLDKGCVPTVITYSIVIDKLC-KSARVRDGCMLLKTMLERGVTPDAIV 588
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 131/323 (40%), Gaps = 34/323 (10%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N +I +F K+G+ A+E+F D GC+ + TY I R D A + E+M
Sbjct: 379 FNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMT 438
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---D 316
E G PD I+S CK + EA+ VY + R + + LI LC+ D
Sbjct: 439 EAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLD 498
Query: 317 ETVKLALDM------------------------LDD---FSGEARKYAIKP----FSSVI 345
+ KL +M LD F E P +S VI
Sbjct: 499 DAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVI 558
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
LC+ V LL M+ G P V+ SVI K+ A E+ KLM+ G
Sbjct: 559 DKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCA 618
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
P V TY L+ +++EA +L + + VTY+++ G+ K E D A +L
Sbjct: 619 PTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRL 678
Query: 466 LNEMKDVGVQPNVDEYNKLIQSL 488
MK G P Y+ L+ L
Sbjct: 679 FQAMKSRGCSPTPFMYSLLLTKL 701
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 156/354 (44%), Gaps = 21/354 (5%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
L+ C + ++ Y L D + EK V + N +I G+ +A V +
Sbjct: 172 TLINGFCKARDFQQAYRLLDEM----EKRGIVPHNAVYNTIIKGLCDNGRVDSAL-VHYR 226
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
C + TY ++AL + A + E MIE G P+ +I+ FCK G
Sbjct: 227 DMQRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGN 286
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED---ETVKLALDMLDDFSGEARKYAIK 339
EA V++ E P LI C+++ + KL +M+ KY +
Sbjct: 287 MDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMV--------KYGCE 338
Query: 340 P----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
P +++++ SL + A L M+ P + FN +I + K G + A E+
Sbjct: 339 PNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYEL 398
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
+LM RG PD+YTY ++SG ++++A ++L + VTY++++ G CK
Sbjct: 399 FQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCK 458
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
+ D A ++ +++ G +V + LI LC K+ AEKLL +M G
Sbjct: 459 ASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLC-KSRRLDDAEKLLREMERNG 511
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 138/362 (38%), Gaps = 78/362 (21%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L++ F + K + A+++F C + TY I + + F A+ + ++M +
Sbjct: 136 NCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 195
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G +P + II C G+ A V Y R+ + SV+ + I
Sbjct: 196 RGIVPHNAVYNTIIKGLCDNGRVDSALVHY---RDMQRNCAPSVITYTI----------- 241
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
++ +LC+ + A +L MI G P +N++I
Sbjct: 242 -----------------------LVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLI 278
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ + K G+M A+ + M PDV+TY L+ GY + ++ ++L E K
Sbjct: 279 NGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCE 338
Query: 441 LSPVTYHTL-----------------------------------IRGYCKLEEFDCALKL 465
+ +TY+TL I +CK+ + D A +L
Sbjct: 339 PNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYEL 398
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG-----LHLNGITRALI 520
M D G P++ YN +I C +A A +LLE M G + N I L
Sbjct: 399 FQLMTDRGCLPDIYTYNIMISGAC-RANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLC 457
Query: 521 RA 522
+A
Sbjct: 458 KA 459
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 108/247 (43%), Gaps = 16/247 (6%)
Query: 246 KIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVV 305
K FDW + G ++S F + KA+EA+ ++ R P
Sbjct: 117 KFFDWCTG------QPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITY 170
Query: 306 AFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLL 361
+ LI+ C+ + + A +LD E K I P ++++I+ LC V A
Sbjct: 171 STLINGFCKARD-FQQAYRLLD----EMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHY 225
Query: 362 SKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG 421
M P + ++ A K+ ++ A +L+ M G P+V TY L++G+
Sbjct: 226 RDM-QRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKL 284
Query: 422 GQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEY 481
G M+EA + N+ +N TY+ LI GYCK E KLL EM G +PN Y
Sbjct: 285 GNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITY 344
Query: 482 NKLIQSL 488
N L+ SL
Sbjct: 345 NTLMDSL 351
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/288 (20%), Positives = 122/288 (42%), Gaps = 5/288 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
++++ +C + E Y ++++++ G L V + LI K + A ++
Sbjct: 450 NSIVSGLCKASQVDEAYEVYEVLRNGGY----FLDVVTCSTLIDGLCKSRRLDDAEKLLR 505
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ G + Y I + D + + +M++ G +P +I CK
Sbjct: 506 EMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSA 565
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ ++ ++ E+ + P V +I LC+ D + A ++ + +
Sbjct: 566 RVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSD-SYDEAYELYKLMKQTGCAPTVVTY 624
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+ ++ LC++ + A LL M S+G P +NSV + K+ + A + + M+S
Sbjct: 625 NVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKS 684
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
RG P + Y+ L++ +M++A EI EA + + + P TL
Sbjct: 685 RGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVDPEISRTL 732
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%)
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G K +T L+S + + +EA ++ + +TY TLI G+CK +F A
Sbjct: 127 GYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQA 186
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+LL+EM+ G+ P+ YN +I+ LC
Sbjct: 187 YRLLDEMEKRGIVPHNAVYNTIIKGLC 213
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 143/321 (44%), Gaps = 3/321 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I K G A +FN+ G A+ TY I L +D + +MI
Sbjct: 280 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 339
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+PD +I F K GK EA +Y + + P LI C+E+ + A
Sbjct: 340 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN-CLHEA 398
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
M D + + I +S +I S C+ K V L ++ S+G P +N+++
Sbjct: 399 NQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLG 458
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ ++G + A E+ + M SRG+ P V TY L+ G + G++ +A EI + +K+ L
Sbjct: 459 FCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLG 518
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
Y+ +I G C + D A L + D GV+P+V YN +I LC K A+ L
Sbjct: 519 IGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKG-SLSEADMLF 577
Query: 503 EDMRLKGLHLNGIT-RALIRA 522
M+ G + T LIRA
Sbjct: 578 RKMKEDGCTPDDFTYNILIRA 598
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 166/383 (43%), Gaps = 24/383 (6%)
Query: 168 ICSSVGKKEVYALWDIV------KEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+CS+V + + Y D+V E+ E + T+ I+ I + + K AF V
Sbjct: 105 LCSAVARTKQY---DLVLGFCKGMELNGIEHDMYTMTIM---INCYCRKKKLLFAFSVLG 158
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ G + T+ + A ++ ++M+E PD V +I+ C G
Sbjct: 159 RAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKG 218
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ EA V+ E P + +++ LC+ + LALD+ K ++ +
Sbjct: 219 RVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA-LALDLFRKMEERNIKASVVQY 277
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
S VI SLC+ A +L ++M +G ++S+I G +ML+ M
Sbjct: 278 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 337
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
R + PDV T++ L+ + G++ EA E+ NE +TY++LI G+CK
Sbjct: 338 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 397
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT----- 516
A ++ + M G +P++ Y+ LI S C KA +L ++ KGL N IT
Sbjct: 398 ANQMFDLMVSKGCEPDIVTYSILINSYC-KAKRVDDGMRLFREISSKGLIPNTITYNTLV 456
Query: 517 -----RALIRAVKELEEDAIENG 534
+ A KEL ++ + G
Sbjct: 457 LGFCQSGKLNAAKELFQEMVSRG 479
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 122/298 (40%), Gaps = 1/298 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V + LI +F K GK A E++N+ G + TY I+ + A + +
Sbjct: 344 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD 403
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
M+ G PD +I+ +CK + + ++ K + P L+ CQ
Sbjct: 404 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSG 463
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ + A ++ + ++ + ++ LC +++ A + KM G ++
Sbjct: 464 K-LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIY 522
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N +I A + A + + +G+KPDV TY ++ G G + EA + + K+
Sbjct: 523 NIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 582
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
+ TY+ LIR + +++L+ EMK G + +I L + LD
Sbjct: 583 DGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLD 640
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 3/149 (2%)
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
V+ A L MI P P FN + SA ++ + K M G++ D+YT T
Sbjct: 80 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 139
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
+++ Y ++ A +L A K +T+ TL+ G+C A+ L++ M ++
Sbjct: 140 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 199
Query: 474 VQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
+P++ + LI LCLK R +E L+
Sbjct: 200 QRPDLVTVSTLINGLCLKG---RVSEALV 225
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 150/314 (47%), Gaps = 10/314 (3%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI+ FS + K A ++FNK N T+ ++ + + A V M++
Sbjct: 240 NALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMK 299
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
PD ++ +C K +A ++ + + +++ C+ +K
Sbjct: 300 DDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCK----IK 355
Query: 321 LALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ + ++ F E R I P +SS+I LC++ + A L+ +M G PP +
Sbjct: 356 MVDEAINLFE-EMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTY 414
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
+S++ A K + A+ +L ++ +G++PD+YTYT L+ G G++E+A + +
Sbjct: 415 SSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLV 474
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
L Y +I+G+C FD AL LL++M+D G PN Y +I SL K +
Sbjct: 475 KGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKD-END 533
Query: 497 TAEKLLEDMRLKGL 510
TAEKLL +M ++GL
Sbjct: 534 TAEKLLREMIVRGL 547
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 145/324 (44%), Gaps = 8/324 (2%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N LI FS+LG +F +F K G T+ I+ L + A +K++
Sbjct: 99 FNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVV 158
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
G D G +I+ CK G+ A + K + P + +I ++C+
Sbjct: 159 AQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCK----A 214
Query: 320 KLALDMLDDFSGEARKYA---IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
KL D D +S K + ++++I + ++ A L +KM E P F
Sbjct: 215 KLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTF 274
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N ++ + K G + A +L +M +KPDV TY LM GY + ++ +A +I +
Sbjct: 275 NILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMAS 334
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ Y T++ G+CK++ D A+ L EM+ + PNV Y+ LI LC K
Sbjct: 335 GGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLC-KLGRIF 393
Query: 497 TAEKLLEDMRLKGLHLNGITRALI 520
A KL+++M +G N +T + I
Sbjct: 394 YALKLVDEMHDRGQPPNIVTYSSI 417
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 137/284 (48%), Gaps = 4/284 (1%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
T+ I S+ + ++S+ K+++ G P + +I C G +A +
Sbjct: 98 TFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKV 157
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
+ + Q LI+ LC+ + AL +L G+ + ++ +I ++C+ K
Sbjct: 158 VAQGFHLDQVSYGTLINGLCKVGR-ITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKL 216
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
V+ A L S+M+++ P +N++IS +S + A+++ M+ + P+VYT+
Sbjct: 217 VNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNI 276
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
L+ G+ G++ +A +L K+ + VTY++L+ GYC + + + A + + M G
Sbjct: 277 LVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGG 336
Query: 474 VQPNVDEYNKLIQSLC-LKALDWRTAEKLLEDMRLKGLHLNGIT 516
V NV Y ++ C +K +D A L E+MR + + N +T
Sbjct: 337 VIANVQIYTTMVNGFCKIKMVD--EAINLFEEMRCRKIIPNVVT 378
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 69/149 (46%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F+ ++ SL + K A +L +M G FN +I+ +S+ G + + + +
Sbjct: 64 FNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKIL 123
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+G P T+ L+ G G + +A ++ L V+Y TLI G CK+
Sbjct: 124 KKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRIT 183
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
AL+LL + VQPN YN +I ++C
Sbjct: 184 AALQLLKRVDGKLVQPNAVMYNMIIDNMC 212
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 87/211 (41%), Gaps = 1/211 (0%)
Query: 194 VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWS 253
+ V+I ++ F K+ A +F + + N TY I+ L + +A
Sbjct: 338 IANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALK 397
Query: 254 VCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC 313
+ ++M + G P+ I+ CK +A + T +++ + P LI LC
Sbjct: 398 LVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLC 457
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
Q ++ A ++ +D + + ++ +I+ C A LLSKM G P
Sbjct: 458 QSGR-LEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNA 516
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
+ VI + + + A ++L+ M RGL
Sbjct: 517 KTYELVILSLFEKDENDTAEKLLREMIVRGL 547
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 72/157 (45%), Gaps = 1/157 (0%)
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
++ + P P FN ++S+ KA + A+ + + M G++ D +T+ L++ ++ G
Sbjct: 52 LLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGL 111
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
+ I + K + +T++TLI+G C AL +++ G + Y
Sbjct: 112 NSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGT 171
Query: 484 LIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
LI LC K A +LL+ + K + N + +I
Sbjct: 172 LINGLC-KVGRITAALQLLKRVDGKLVQPNAVMYNMI 207
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 163/373 (43%), Gaps = 12/373 (3%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
LL + +S ++ + + E G K V+ N LI F K G + A +FN+
Sbjct: 194 LLDKMINSNSPVTIWTFYSEILEYGFPPK----VQYYNILINKFCKEGSIRDAKLIFNEI 249
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
G ++ I L + + D + + + M E PD +I CK G+
Sbjct: 250 RKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRL 309
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
A ++ +++ + P LI C+ + A++ K + +++
Sbjct: 310 DVAEQLFDEMQQRGLRPNGITFTALIDGQCRS-RRIDSAMNTYHQMLTMGVKPDLVMYNT 368
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
++ LC++ DV+ A+ L+ +M G P + ++I Y K GD+ AME+ K M G
Sbjct: 369 LLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEG 428
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
+ D +T L+SG+ G++ +A L E + + TY +I GYCK
Sbjct: 429 VVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGF 488
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRAV 523
KLL EM+ G +P V YN L+ LC K + A LLE M G+ + IT +
Sbjct: 489 KLLKEMQINGHKPGVITYNVLMNGLC-KQGQMKNANMLLEAMLNLGVTPDDITYNI---- 543
Query: 524 KELEEDAIENGEA 536
L E +NG+A
Sbjct: 544 --LLEGHCKNGKA 554
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 153/333 (45%), Gaps = 13/333 (3%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA 216
T+ + L+ +C S E + L K+ E+ + V + LI K G+ A
Sbjct: 257 TTVSFNTLINGLCKSRNLDEGFRL----KKTMEENRIYPDVFTYSVLIHGLCKEGRLDVA 312
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
++F++ G N T+ I+ R + D A + +M+ G PD +++
Sbjct: 313 EQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNG 372
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
CK G +A + R M P + LI C+E + ++ A+++ + E
Sbjct: 373 LCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGD-LESAMEIRKGMNEEGVVL 431
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
F+++I CR V A+ L +M+ G P +A + VI Y K G++ ++L
Sbjct: 432 DNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLL 491
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYC 454
K M+ G KP V TY LM+G GQM+ A +L EA N ++P +TY+ L+ G+C
Sbjct: 492 KEMQINGHKPGVITYNVLMNGLCKQGQMKNA-NMLLEAMLNLG-VTPDDITYNILLEGHC 549
Query: 455 KLEEFDCALKLLNE---MKDVGVQPN-VDEYNK 483
K + + LKL NE + D + V EYNK
Sbjct: 550 KNGKAEDLLKLRNEKGLIVDYAYYTSLVSEYNK 582
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 52/213 (24%)
Query: 355 HGAKTLLSKMISE----------------GPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
HG LL KMI+ G PP +N +I+ + K G + A +
Sbjct: 189 HGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNE 248
Query: 399 MRSRGLK-----------------------------------PDVYTYTGLMSGYANGGQ 423
+R RGL+ PDV+TY+ L+ G G+
Sbjct: 249 IRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGR 308
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
++ A ++ +E ++ R + +T+ LI G C+ D A+ ++M +GV+P++ YN
Sbjct: 309 LDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNT 368
Query: 484 LIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
L+ LC K D A KL+++MR+ G+ + IT
Sbjct: 369 LLNGLC-KVGDVNKARKLVDEMRMVGMKPDKIT 400
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 132/293 (45%), Gaps = 1/293 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V L +I L + AF K G + T+ I L A + +
Sbjct: 105 VYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFD 164
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
KMI G P+ G +I+ CK G A + + P V + LI SLC+ D
Sbjct: 165 KMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCK-D 223
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
V A ++ + + I ++S+I LC++ + TL+++M+ P
Sbjct: 224 RQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTL 283
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N+V+ A K G + A +++ +M RG++P+V TY LM G+ +++ A ++ +
Sbjct: 284 NTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVH 343
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ ++Y+TLI GYCK++ D A+ L EM + PN YN LI LC
Sbjct: 344 KDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLC 396
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 145/341 (42%), Gaps = 8/341 (2%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V + + LI K + AF +F++ G N TY I L + + ++
Sbjct: 210 VVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMN 269
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M+++ +PD + ++ CK G EAH V + + + P L+ C +
Sbjct: 270 EMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRN 329
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
E V +A+ + D + + ++++I C+++ V A L +M + P +
Sbjct: 330 E-VDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTY 388
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N++I G + A+ + M +RG PD+ TY L +++A +L +
Sbjct: 389 NTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEG 448
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
++ Y T++ G C+ E + A L + + G+QPNV YN +I LC + L
Sbjct: 449 SNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGL-LA 507
Query: 497 TAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIENGEAL 537
A KL +M G N T LI + N EAL
Sbjct: 508 EASKLFSEMNKNGCSPNDCTYNLI------TRGFLRNNEAL 542
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 126/272 (46%), Gaps = 8/272 (2%)
Query: 248 FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY--PPQS-V 304
D A S +M+ P + ++++ K K + +L+R+ + PP
Sbjct: 51 LDEALSTFNRMLHKQPPPSTVDFNRLLTSI---AKTKHHSTLLSLSRQMDSFGIPPDVYT 107
Query: 305 VAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM 364
+A +I+SLC + V A L + F+++IR LC + A L KM
Sbjct: 108 LAIVINSLCHLNR-VDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKM 166
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
I EG P + ++I+ K G+ + A+ +L+ M +P+V ++ L+ Q+
Sbjct: 167 IGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQV 226
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
EA I +E + VTY++LI G CKL E+ L+NEM D + P+V N +
Sbjct: 227 TEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTV 286
Query: 485 IQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ +LC + + A +++ M +G+ N +T
Sbjct: 287 VDALCKEGM-VAEAHDVVDMMIHRGVEPNVVT 317
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 94/231 (40%), Gaps = 1/231 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI + K+ A +F + N TY I L A S+ +M+
Sbjct: 354 NTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVA 413
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G +PD + + CK +A + P + ++ +C+ E ++
Sbjct: 414 RGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGE-LE 472
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A D+ + S + + + ++ +I LC+ + A L S+M G P + +N +
Sbjct: 473 DARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLIT 532
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+ + + +E+L+ M +RG DV T T L+ ++ G + +IL
Sbjct: 533 RGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQIL 583
>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 804
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 163/389 (41%), Gaps = 46/389 (11%)
Query: 155 WVTSG-VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGV-LTVEILNELIALFSKLGK 212
WV+ ++D L+K E+Y W ++KEI K G ++ + LI ++K+
Sbjct: 91 WVSHNMIIDMLIKD-----NGFELY--WQVLKEI--KRCGFSISADAFTVLIQAYAKMDM 141
Query: 213 GKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGK 272
+ A E F D+ C + TY + + R+++ A + +M++ LP+
Sbjct: 142 IEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSI 201
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET-------------- 318
+I CK GK + A ++ ++++ P + +IS LCQ +
Sbjct: 202 LIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHG 261
Query: 319 --------------------VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
V AL +L F + + +S +I L R + A+
Sbjct: 262 CIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQ 321
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
KM P ++ ++ SKAG A+ +L M RGL PD + Y L+ GY
Sbjct: 322 VWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGY 381
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
+ G ++EA + E KN S TY LI G C+ A ++ NEM+ G P+V
Sbjct: 382 CDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSV 441
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRL 507
+N LI C KA + A+ L M +
Sbjct: 442 VTFNALIDGFC-KAGNIEKAQLLFYKMEI 469
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 113/275 (41%), Gaps = 20/275 (7%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
SK GK K A + N+ + G V + Y I+ + D A S+ ++ +
Sbjct: 346 LSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSS 405
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALD 324
+ +I C+ G +A ++ + YP SVV F LI C+ K L
Sbjct: 406 ACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYP--SVVTFNALIDGFCKAGNIEKAQLL 463
Query: 325 M------------LDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
L G R +++ LC + A +L ++ G P
Sbjct: 464 FYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPN 523
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+N +I + KAG++ A ++ K ++ +GL PD TY L++G + + E+A +L+
Sbjct: 524 IITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLD 583
Query: 433 EAKKNHSRLSPVT--YHTLIRGYCKLEEFDCALKL 465
+ KN +P+T Y + + C+ + A L
Sbjct: 584 QILKNGC--TPITEVYKSFMTWSCRRNKITLAFSL 616
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 138/380 (36%), Gaps = 65/380 (17%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEI-LNELIALFSKLGKGKAAFEVFNK 222
++ +C + Y L+ I K+ G + + N L+ F KLG+ A +
Sbjct: 237 IISGLCQAQKADVAYRLF-----IAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKY 291
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
F V +++ Y I+ L R + F+ A KM E PD ++ K GK
Sbjct: 292 FEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGK 351
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ-----EDETVKLALDMLDDFSGEARKYA 337
K+A + E+ + P LI C E +++ L + D FS
Sbjct: 352 FKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSAC---- 407
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA----- 392
++ +I +CR V A+ + ++M G P FN++I + KAG++ A
Sbjct: 408 --TYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFY 465
Query: 393 -MEM------------------------------------------LKLMRSRGLKPDVY 409
ME+ L + G P++
Sbjct: 466 KMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNII 525
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
TY L+ G+ G + A ++ E + VTY TLI G + A +L+++
Sbjct: 526 TYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQI 585
Query: 470 KDVGVQPNVDEYNKLIQSLC 489
G P + Y + C
Sbjct: 586 LKNGCTPITEVYKSFMTWSC 605
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 96/224 (42%), Gaps = 39/224 (17%)
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
+ +M+ DF + + +++V+ + R + V A + ++M+ P A F+ +I
Sbjct: 148 SFEMMKDFDCKPDVFT---YNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILID 204
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
K+G A++M M R + P+ TYT ++SG + + A + K +
Sbjct: 205 GMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIP 264
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLL----------------------------------- 466
VTY+ L+ G+CKL D AL LL
Sbjct: 265 DSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWY 324
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+M + ++P+V Y +++ L KA ++ A +LL +M +GL
Sbjct: 325 RKMTEHNIKPDVILYTIMMKGLS-KAGKFKDALRLLNEMTERGL 367
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 120/281 (42%), Gaps = 16/281 (5%)
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A+++ ++ ++G P+ +I FCK G A ++ + K + P LI+
Sbjct: 508 AYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLIN 567
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSL----CRMKDVHGAKTLLSKMIS 366
L + A +LD + K P + V +S CR + A +L K +
Sbjct: 568 GLLSANREED-AFTVLD----QILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKYLR 622
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
P + V SV + K G++ A+ L M + + YT + G G++EE
Sbjct: 623 SIPGRDSEVLKSVEENFEK-GEVEEAVRGLLEMDFKLNDFQLAPYTIWLIGLCQAGRLEE 681
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A +I ++++ ++P + LI K+ D A ++ D G N+L++
Sbjct: 682 ALKIFFTLEEHNVLVTPPSCVKLIYRLLKVGNLDLAAEIFLYTIDKGYMLMPRICNRLLK 741
Query: 487 SLCLKALDWRT-AEKLLEDMRLKGL----HLNGITRALIRA 522
SL L++ D R A LL M+ G HL+ T+ L++
Sbjct: 742 SL-LRSEDKRNRAFDLLSRMKSLGYDLDSHLHQTTKFLLQG 781
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 151/327 (46%), Gaps = 6/327 (1%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
+LK+ C ++ Y L++ + + G G+ N LI ++K G+ A ++ +
Sbjct: 14 VLKSFCKQGKLRDGYKLFEQMLDNGISPDGIE----YNILIDGYAKKGRVDEANRLYEEM 69
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
G + TY + A + A + + M E G PD IIS CK GK
Sbjct: 70 VSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKV 129
Query: 284 KEA-HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
EA +++ E+ LI+ LC+ DE ++ A +L++ + + ++
Sbjct: 130 TEALEMLFHKMIERGCSANTVAYNALINGLCK-DENIERAYKLLEEMASKGYVPDNITYN 188
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+++ LCRM V AK M S G P +N ++ A K G AM++ K + ++
Sbjct: 189 TILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAK 248
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G PD TY ++ G A M+EA E+ + + + TY ++ G+C+ ++ D A
Sbjct: 249 GYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDA 308
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLC 489
K+L EM +G P+V YN L+ LC
Sbjct: 309 HKVLEEMSKIGAVPDVVTYNILLDGLC 335
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 182/399 (45%), Gaps = 47/399 (11%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFE-VF 220
++LL A C KE L+ + E G E V+T + +I+ K GK A E +F
Sbjct: 82 NSLLNAFCKETKMKEAMELFKTMAEKGF-EPDVVT---YSTIISGLCKTGKVTEALEMLF 137
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+K + GC AN Y I L + + + A+ + E+M G +PD+ I+S C+
Sbjct: 138 HKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRM 197
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAI 338
GK EA + + + Y P VVA+ L+ +L +E +T + A+ + D +
Sbjct: 198 GKVSEAKQFFD-SMPSRGYSPD-VVAYNGLLDALYKEGKTDE-AMKLFKDVIAKGYMPDT 254
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
++S++ L R ++ A+ + KM++ G P A ++ V+S + +A + A ++L+
Sbjct: 255 VTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEE 314
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEI----------------------LNEAKK 436
M G PDV TY L+ G +++A E+ L + K
Sbjct: 315 MSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNK 374
Query: 437 NHS-----------RLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
H +L P VT++ L+ G CK + D A LL++M G P+ YN
Sbjct: 375 VHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNT 434
Query: 484 LIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRA 522
L+ L K A++L + M+ KG L+ +A +RA
Sbjct: 435 LMNGL-RKQGRHIQADRLTQAMKEKGF-LSDCFKAPLRA 471
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 90/181 (49%), Gaps = 2/181 (1%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F V++S C+ + L +M+ G P +N +I Y+K G + A + + M
Sbjct: 11 FRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMV 70
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
S GL+P +YTY L++ + +M+EA E+ + VTY T+I G CK +
Sbjct: 71 SVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVT 130
Query: 461 CALKLL-NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRAL 519
AL++L ++M + G N YN LI LC K + A KLLE+M KG + IT
Sbjct: 131 EALEMLFHKMIERGCSANTVAYNALINGLC-KDENIERAYKLLEEMASKGYVPDNITYNT 189
Query: 520 I 520
I
Sbjct: 190 I 190
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 3/170 (1%)
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P F V+ ++ K G + ++ + M G+ PD Y L+ GYA G+++EA +
Sbjct: 6 PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
E S TY++L+ +CK + A++L M + G +P+V Y+ +I LC
Sbjct: 66 YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125
Query: 491 KALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAVKELEEDAIENGEALVE 539
E L M +G N + ALI + +++ IE L+E
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGL--CKDENIERAYKLLE 173
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
R P+ YT+ ++ + G++ + ++ + N + Y+ LI GY K D
Sbjct: 2 RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
A +L EM VG++P++ YN L+ + C K + A +L + M KG + +T + I
Sbjct: 62 ANRLYEEMVSVGLEPSIYTYNSLLNAFC-KETKMKEAMELFKTMAEKGFEPDVVTYSTI 119
>gi|428186270|gb|EKX55120.1| hypothetical protein GUITHDRAFT_53115, partial [Guillardia theta
CCMP2712]
Length = 363
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 148/311 (47%), Gaps = 11/311 (3%)
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRR-------KIFDWAWSVCEK-MIETGSL- 264
+AA EV G + +Y + AL+R +FD +S E+ + SL
Sbjct: 1 EAALEVLKSIEKEGLTPTRVSYNAAMSALTRNGRWREALSMFDSVFSQTERNKVAARSLR 60
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALD 324
PD+ IS KGG+ + A +Y + + P + A LI++ C++ V A +
Sbjct: 61 PDTVTFSTAISACAKGGEWQRAMNMYHEMEAQGIEPNEFTFAALITA-CEKGGQVSKAFE 119
Query: 325 MLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
+ + + F++ I S ++ D A LL +MI++G P +++ ISA
Sbjct: 120 VFERMQARGIVGNVYTFTAAISSCEKLGDWQRALKLLEEMIAKGIQPNLQAYSAAISACE 179
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV 444
KA + PA+ +L+ M + +KPD+ Y+ +M+ G E A I + K+ V
Sbjct: 180 KAAEARPALGLLERMTNEKIKPDIIVYSAVMAACGKAGLWEPAARIFQKMKREGLTPDVV 239
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLED 504
Y TLI+ Y + E+ AL++ M+ GV+PNV Y + I + C KA +WR + LLE
Sbjct: 240 AYSTLIQAYQRAGEWSRALEVFQLMEKAGVRPNVIAYTEAIAA-CAKAGEWRRSLGLLER 298
Query: 505 MRLKGLHLNGI 515
M+ L + +
Sbjct: 299 MKADKLRPDAV 309
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 126/298 (42%), Gaps = 41/298 (13%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDW--AWSVCEKMIE 260
LI K G+ AFEVF + G V N Y FT S K+ DW A + E+MI
Sbjct: 104 LITACEKGGQVSKAFEVFERMQARGIVGN--VYTFTAAISSCEKLGDWQRALKLLEEMIA 161
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ + IS C++ +
Sbjct: 162 KGIQPNLQAYSAAIS------------------------------------ACEKAAEAR 185
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
AL +L+ + E K I +S+V+ + + A + KM EG P ++++I
Sbjct: 186 PALGLLERMTNEKIKPDIIVYSAVMAACGKAGLWEPAARIFQKMKREGLTPDVVAYSTLI 245
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
AY +AG+ + A+E+ +LM G++P+V YT ++ A G+ + +L K + R
Sbjct: 246 QAYQRAGEWSRALEVFQLMEKAGVRPNVIAYTEAIAACAKAGEWRRSLGLLERMKADKLR 305
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
V Y+ +I + ++D L LL +++ QPN+ Y +I++ C W A
Sbjct: 306 PDAVAYNFVISALSRGGQWDAGLTLLQMLEEDEAQPNISTYCTVIKA-CGDNGQWEKA 362
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 147/331 (44%), Gaps = 12/331 (3%)
Query: 182 DIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVF---------NKFGDYGCVANQ 232
+++K I EKE T N ++ ++ G+ + A +F NK +
Sbjct: 5 EVLKSI-EKEGLTPTRVSYNAAMSALTRNGRWREALSMFDSVFSQTERNKVAARSLRPDT 63
Query: 233 ETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTL 292
T+ I A ++ + A ++ +M G P+ +I+ KGG+ +A V+
Sbjct: 64 VTFSTAISACAKGGEWQRAMNMYHEMEAQGIEPNEFTFAALITACEKGGQVSKAFEVFER 123
Query: 293 AREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMK 352
+ + + ISS C++ + AL +L++ + + ++ +S+ I + +
Sbjct: 124 MQARGIVGNVYTFTAAISS-CEKLGDWQRALKLLEEMIAKGIQPNLQAYSAAISACEKAA 182
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT 412
+ A LL +M +E P V+++V++A KAG PA + + M+ GL PDV Y+
Sbjct: 183 EARPALGLLERMTNEKIKPDIIVYSAVMAACGKAGLWEPAARIFQKMKREGLTPDVVAYS 242
Query: 413 GLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
L+ Y G+ A E+ +K R + + Y I K E+ +L LL MK
Sbjct: 243 TLIQAYQRAGEWSRALEVFQLMEKAGVRPNVIAYTEAIAACAKAGEWRRSLGLLERMKAD 302
Query: 473 GVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
++P+ YN +I +L + W LL+
Sbjct: 303 KLRPDAVAYNFVISALS-RGGQWDAGLTLLQ 332
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 164/389 (42%), Gaps = 55/389 (14%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
++K C + + + L +++E G V I LI K G A +F K
Sbjct: 164 MIKGCCEAGYFVKGFRLLAMLEEFGLSPN----VVIYTTLIDGCCKDGNVMLAKNLFCKM 219
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
G V N TY + ++ + + + E M +G +P++ +IS +C G
Sbjct: 220 NRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMV 279
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQED---ETVKLALDMLDDFSGEARKYAIKP 340
+A V+ REK + LI LC+ E VKL + K + P
Sbjct: 280 DKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLV--------HKVNKVGLSP 331
Query: 341 ----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
++ +I C ++ + A L +++ S G P +N++I+ YSK ++ A++++
Sbjct: 332 NIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLV 391
Query: 397 K-----------------------------------LMRSRGLKPDVYTYTGLMSGYANG 421
K LM GL PDVYTY+ L+ G
Sbjct: 392 KEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVH 451
Query: 422 GQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEY 481
G M+EA ++ + H + + V Y+T+I GYCK AL+LLNEM G+ PNV +
Sbjct: 452 GNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASF 511
Query: 482 NKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
I LC + W+ AE LL M GL
Sbjct: 512 CSTIGLLC-RDEKWKEAELLLGQMINSGL 539
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 143/321 (44%), Gaps = 23/321 (7%)
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH 287
C Y + A D A + MI G +P S ++ + +A
Sbjct: 85 CSTYTPLYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAW 144
Query: 288 VVYTLAREKKMYPPQSVVAFLISSLCQEDETVK--LALDMLDDFSGEARKYAIKPFSSVI 345
++ + K + S +I C+ VK L ML++F G + I ++++I
Sbjct: 145 WIFNELKSKVVLDAYSF-GIMIKGCCEAGYFVKGFRLLAMLEEF-GLSPNVVI--YTTLI 200
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
C+ +V AK L KM G P ++ +++ + K G +M + M+ G+
Sbjct: 201 DGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIV 260
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
P+ Y Y L+S Y N G +++A ++ E ++ +TY+ LI G C+ ++F A+KL
Sbjct: 261 PNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKL 320
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLC-LKALDWRTAEKLLEDMRLKGLHLNGITRALIRA-- 522
++++ VG+ PN+ YN LI C ++ +D +A +L ++ GL +T + A
Sbjct: 321 VHKVNKVGLSPNIVTYNILINGFCDVRKMD--SAVRLFNQLKSSGLSPTLVTYNTLIAGY 378
Query: 523 ------------VKELEEDAI 531
VKE+EE I
Sbjct: 379 SKVENLAGALDLVKEMEERCI 399
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 1/184 (0%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
T+ N LIA +SK+ A ++ + + ++ TY I+A +R + A +
Sbjct: 367 TLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMH 426
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
M ++G +PD ++ C G KEA ++ E + P + +I C+E
Sbjct: 427 SLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKE 486
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ + AL +L++ + F S I LCR + A+ LL +MI+ G P ++
Sbjct: 487 GSSYR-ALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSL 545
Query: 376 FNSV 379
+ V
Sbjct: 546 YKMV 549
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 149/321 (46%), Gaps = 5/321 (1%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
F LG+ A +F + + + N+ T+ I+ L ++++ AW V E M E G PD
Sbjct: 125 FCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPD 184
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
++ +C + EA ++ + K P LI+ C+ + A +L
Sbjct: 185 VYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGR-IDEAKGLL 243
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
+ S ++ I +S+++R C++ A+ LL +M S G P ++ V+ K
Sbjct: 244 AEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKH 303
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
G + A E+LK M+ ++P+++ YT L+ G G++E A E+ + + + VTY
Sbjct: 304 GHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTY 363
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
+I G K + A +L EM G PN YN +IQ L+ D A +L+E+M
Sbjct: 364 TVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGF-LRNGDTPNAVRLIEEMV 422
Query: 507 LKGLHLNGITRALIRAVKELE 527
KG + T R + +LE
Sbjct: 423 GKGFSADSST---FRMLSDLE 440
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 139/280 (49%), Gaps = 7/280 (2%)
Query: 243 SRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQ 302
S+ KI D A + ++M++ G PD II+ CK G A + EK P
Sbjct: 22 SKAKIMD-AVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEKGCKP-- 78
Query: 303 SVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTL 360
+VVA+ +I SLC+ D V A+D + E + +SS++ C + V+ A +L
Sbjct: 79 NVVAYNTIIDSLCK-DRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSL 137
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
+M+ P F +I K ++ A + + M +GL+PDVYTY L+ GY +
Sbjct: 138 FKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCS 197
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
QM+EA ++ N + + +Y+ LI G+CK D A LL EM + P++
Sbjct: 198 RSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFT 257
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
Y+ L++ C + + A++LL++M GL N IT +++
Sbjct: 258 YSTLMRGFC-QVGRPQEAQELLKEMCSYGLLPNLITYSIV 296
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 163/397 (41%), Gaps = 47/397 (11%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ LL +CS + L+D + ++G + + I+N L K+G A ++
Sbjct: 14 NTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGL----CKMGNTTMALQLLK 69
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
K + GC N Y I++L + ++ A +M++ G PD I+ FC G
Sbjct: 70 KMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLG 129
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLC---------------------------- 313
+ EA ++ E+ + P + LI LC
Sbjct: 130 RVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYN 189
Query: 314 ----------QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSK 363
Q DE KL M D G A ++ ++ +I C+ + AK LL++
Sbjct: 190 ALVDGYCSRSQMDEAQKLFNIM--DRKGCAPN--VRSYNILINGHCKSGRIDEAKGLLAE 245
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
M + P +++++ + + G A E+LK M S GL P++ TY+ ++ G G
Sbjct: 246 MSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGH 305
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
++EA E+L +++ + Y LI G C + + A +L + + G+QP V Y
Sbjct: 306 LDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTV 365
Query: 484 LIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
+I L L E L +M + G N T +I
Sbjct: 366 MISGLLKGGLSNEACE-LFREMAVNGCLPNSCTYNVI 401
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 84/180 (46%), Gaps = 5/180 (2%)
Query: 335 KYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
K ++P F++++ LC + A L +M+ G P ++++I+ K G+ T
Sbjct: 3 KLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTT 62
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A+++LK M +G KP+V Y ++ + EA + +E K TY +++
Sbjct: 63 MALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSIL 122
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
G+C L + A L +M + V PN + LI LC K + A + E M KGL
Sbjct: 123 HGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRM-ISEAWLVFETMTEKGL 181
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 124/327 (37%), Gaps = 52/327 (15%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEK--EKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
L+ +C K+ + W + + + EK E V T N L+ + + A ++FN
Sbjct: 156 LIDGLCK---KRMISEAWLVFETMTEKGLEPDVYTY---NALVDGYCSRSQMDEAQKLFN 209
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
GC N +Y I + D A + +M PD ++ FC+ G
Sbjct: 210 IMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVG 269
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP- 340
+ +EA L+ +C Y + P
Sbjct: 270 RPQEAQE-------------------LLKEMCS---------------------YGLLPN 289
Query: 341 ---FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+S V+ LC+ + A LL M P ++ +I G + A E+
Sbjct: 290 LITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFS 349
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
+ +G++P V TYT ++SG GG EACE+ E N + TY+ +I+G+ +
Sbjct: 350 NLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNG 409
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKL 484
+ A++L+ EM G + + L
Sbjct: 410 DTPNAVRLIEEMVGKGFSADSSTFRML 436
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 60/126 (47%)
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
M G P FN+++S + A+++ M G +PDV TY+ +++G G
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
A ++L + ++ + + V Y+T+I CK A+ +EM G+ P+V Y+
Sbjct: 61 TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120
Query: 484 LIQSLC 489
++ C
Sbjct: 121 ILHGFC 126
>gi|222636666|gb|EEE66798.1| hypothetical protein OsJ_23544 [Oryza sativa Japonica Group]
Length = 665
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 150/322 (46%), Gaps = 8/322 (2%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
+I N LI S+ G+ + A + + TY I A + A +C+K
Sbjct: 47 DIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKK 106
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M E G PD ++S G + +A + + + + + +I L + +
Sbjct: 107 MTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQ 166
Query: 318 TVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
+ A+++ + S R+ P ++S++ S C V K + M++EG P
Sbjct: 167 CGE-AIELFN--SMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNI 223
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+NS++ AY+ G A+ + L++ GL+PD+ +YT L++ Y Q E+A E+ N+
Sbjct: 224 VAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNK 283
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
KKN + + V+Y+ LI Y A+ LL+EM+ G+QP+V + L+ + C +
Sbjct: 284 MKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAA-CGRCR 342
Query: 494 DWRTAEKLLEDMRLKGLHLNGI 515
E +LE R +G+ LN +
Sbjct: 343 QITRIETILEAARSRGIDLNTV 364
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 141/346 (40%), Gaps = 37/346 (10%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
T N +I G K A E+ K + G + T+ + AL + A S
Sbjct: 80 TRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYF 139
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLC 313
E M D+ + II K G+ EA ++ RE++ P VV + ++ S C
Sbjct: 140 EIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYC 199
Query: 314 --QEDETVKLALDML---------------------DDFSGEA-------RKYAIKP--- 340
+ E K D++ EA +K ++P
Sbjct: 200 IYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIV 259
Query: 341 -FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
++S++ + R A+ + +KM P +N++I AY AG + A+ +L M
Sbjct: 260 SYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEM 319
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
G++PDV + + L++ Q+ IL A+ L+ V Y++ I+ Y ++
Sbjct: 320 EKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDY 379
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
+ AL+L M++ V+P+ YN LI S K + + + EDM
Sbjct: 380 EKALELYTSMRESNVKPDAVTYNILI-SGSSKLGKYTESLRFFEDM 424
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 122/326 (37%), Gaps = 25/326 (7%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+ ++ G + A +FN G + +Y + A R + A V KM +
Sbjct: 227 NSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKK 286
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
P+ +I + G KEA V EK P V + + C +
Sbjct: 287 NSCKPNKVSYNALIDAYGSAGMLKEA-VGLLHEMEKDGIQPDVVSISTLLAACGRCRQIT 345
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
+L+ ++S I+S D A L + M P +N +I
Sbjct: 346 RIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILI 405
Query: 381 SAYSKAGDMTPAMEML--------------KL---------MRSRGLKPDVYTYTGLMSG 417
S SK G T ++ KL M+ G PDV TYT L+
Sbjct: 406 SGSSKLGKYTESLRFFEDMVDSKVSSTKEGKLSEAESTFSSMKKSGCFPDVLTYTTLIQA 465
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
Y GG + A ++ E + N + +L+ + K E + L+L+ MK + N
Sbjct: 466 YNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEFMKKKSIPLN 525
Query: 478 VDEYNKLIQSLCLKALDWRTAEKLLE 503
Y ++I S C DW+TA +++E
Sbjct: 526 QKSYFEIIAS-CTMIRDWKTASEMIE 550
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 138/352 (39%), Gaps = 49/352 (13%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGD--YGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
LN +I K+G+ A E+FN + C + TY + + + ++ +
Sbjct: 154 LNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDL 213
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSL----- 312
M+ G P+ ++ + G +EA ++ L ++ + P L+++
Sbjct: 214 MVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQ 273
Query: 313 ---------------CQEDETVKLAL-------DMLDDFSG---EARKYAIKP----FSS 343
C+ ++ AL ML + G E K I+P S+
Sbjct: 274 PEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSIST 333
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
++ + R + + +T+L S G +NS I +Y GD A+E+ MR
Sbjct: 334 LLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESN 393
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
+KPD TY L+SG + G+ E+ + S++S KL E A
Sbjct: 394 VKPDAVTYNILISGSSKLGKYTESLRFFEDMVD--SKVSSTKEG-------KLSE---AE 441
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
+ MK G P+V Y LIQ+ W+ A L ++M + G+ + I
Sbjct: 442 STFSSMKKSGCFPDVLTYTTLIQAYNAGG-GWKRAWDLFKEMEVNGIPPDAI 492
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 89/243 (36%), Gaps = 73/243 (30%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG----------DM- 389
+ +IR R V A+ L +M P ++NS+I A+S+AG DM
Sbjct: 14 YGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDML 73
Query: 390 ------------------------TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG---- 421
A+E+ K M G+ PD+ T+ ++S NG
Sbjct: 74 RAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYS 133
Query: 422 -------------------------------GQMEEACEILNEAKKNHSRLSP--VTYHT 448
GQ EA E+ N ++ ++ P VTY +
Sbjct: 134 KAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTS 193
Query: 449 LIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLK 508
++ YC + + + + M GV+PN+ YN L+ + + + R A + ++
Sbjct: 194 IMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMH-REALAIFNLIKKN 252
Query: 509 GLH 511
GL
Sbjct: 253 GLR 255
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 53/116 (45%)
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
N ++ +I Y++ + A + M+ KPD Y L+ ++ GQ A I+
Sbjct: 11 NDIYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIME 70
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ + + TY+ +I + AL+L +M + GV P++ +N ++ +L
Sbjct: 71 DMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSAL 126
>gi|297606902|ref|NP_001059180.2| Os07g0213300 [Oryza sativa Japonica Group]
gi|215767816|dbj|BAH00045.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677604|dbj|BAF21094.2| Os07g0213300 [Oryza sativa Japonica Group]
Length = 677
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 150/322 (46%), Gaps = 8/322 (2%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
+I N LI S+ G+ + A + + TY I A + A +C+K
Sbjct: 47 DIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKK 106
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M E G PD ++S G + +A + + + + + +I L + +
Sbjct: 107 MTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQ 166
Query: 318 TVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
+ A+++ + S R+ P ++S++ S C V K + M++EG P
Sbjct: 167 CGE-AIELFN--SMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNI 223
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+NS++ AY+ G A+ + L++ GL+PD+ +YT L++ Y Q E+A E+ N+
Sbjct: 224 VAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNK 283
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
KKN + + V+Y+ LI Y A+ LL+EM+ G+QP+V + L+ + C +
Sbjct: 284 MKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAA-CGRCR 342
Query: 494 DWRTAEKLLEDMRLKGLHLNGI 515
E +LE R +G+ LN +
Sbjct: 343 QITRIETILEAARSRGIDLNTV 364
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 149/351 (42%), Gaps = 24/351 (6%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
++LL A S +E A+++++K+ G + V +LN + + + + A EVFN
Sbjct: 227 NSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNA----YGRSAQPEKAREVFN 282
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
K C N+ +Y I+A + A + +M + G PD + +++ +
Sbjct: 283 KMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCR 342
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLD-----DFSGEARKY 336
+ + AR + + + VA+ + +K L D + R+
Sbjct: 343 QITRIETILEAARSRGI--DLNTVAY--------NSGIKSYLSFGDYEKALELYTSMRES 392
Query: 337 AIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
+KP ++ +I ++ + M+ V++S+I +Y K G ++ A
Sbjct: 393 NVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSSLIYSYIKQGKLSEA 452
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
M+ G PDV TYT L+ Y GG + A ++ E + N + +L+
Sbjct: 453 ESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEA 512
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
+ K E + L+L+ MK + N Y ++I S C DW+TA +++E
Sbjct: 513 FNKGGEPERVLQLMEFMKKKSIPLNQKSYFEIIAS-CTMIRDWKTASEMIE 562
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 140/352 (39%), Gaps = 37/352 (10%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGD--YGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
LN +I K+G+ A E+FN + C + TY + + + ++ +
Sbjct: 154 LNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDL 213
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSL----- 312
M+ G P+ ++ + G +EA ++ L ++ + P L+++
Sbjct: 214 MVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQ 273
Query: 313 ---------------CQEDETVKLAL-------DMLDDFSG---EARKYAIKP----FSS 343
C+ ++ AL ML + G E K I+P S+
Sbjct: 274 PEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSIST 333
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
++ + R + + +T+L S G +NS I +Y GD A+E+ MR
Sbjct: 334 LLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESN 393
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
+KPD TY L+SG + G+ E+ + + + Y +LI Y K + A
Sbjct: 394 VKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSSLIYSYIKQGKLSEAE 453
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
+ MK G P+V Y LIQ+ W+ A L ++M + G+ + I
Sbjct: 454 STFSSMKKSGCFPDVLTYTTLIQAYNAGG-GWKRAWDLFKEMEVNGIPPDAI 504
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 89/243 (36%), Gaps = 73/243 (30%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG----------DM- 389
+ +IR R V A+ L +M P ++NS+I A+S+AG DM
Sbjct: 14 YGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDML 73
Query: 390 ------------------------TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG---- 421
A+E+ K M G+ PD+ T+ ++S NG
Sbjct: 74 RAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYS 133
Query: 422 -------------------------------GQMEEACEILNEAKKNHSRLSP--VTYHT 448
GQ EA E+ N ++ ++ P VTY +
Sbjct: 134 KAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTS 193
Query: 449 LIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLK 508
++ YC + + + + M GV+PN+ YN L+ + + + R A + ++
Sbjct: 194 IMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMH-REALAIFNLIKKN 252
Query: 509 GLH 511
GL
Sbjct: 253 GLR 255
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 53/116 (45%)
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
N ++ +I Y++ + A + M+ KPD Y L+ ++ GQ A I+
Sbjct: 11 NDIYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIME 70
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ + + TY+ +I + AL+L +M + GV P++ +N ++ +L
Sbjct: 71 DMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSAL 126
>gi|218199303|gb|EEC81730.1| hypothetical protein OsI_25362 [Oryza sativa Indica Group]
Length = 583
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 150/322 (46%), Gaps = 8/322 (2%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
+I N LI S+ G+ + A + + TY I A + A +C+K
Sbjct: 47 DIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKK 106
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M E G PD ++S G + +A + + + + + +I L + +
Sbjct: 107 MTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQ 166
Query: 318 TVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
+ A+++ + S R+ P ++S++ S C V K + M++EG P
Sbjct: 167 CGE-AIELFN--SMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNI 223
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+NS++ AY+ G A+ + L++ GL+PD+ +YT L++ Y Q E+A E+ N+
Sbjct: 224 VAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNK 283
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
KKN + + V+Y+ LI Y A+ LL+EM+ G+QP+V + L+ + C +
Sbjct: 284 MKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAA-CGRCR 342
Query: 494 DWRTAEKLLEDMRLKGLHLNGI 515
E +LE R +G+ LN +
Sbjct: 343 QITRIETILEAARSRGIDLNTV 364
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 133/326 (40%), Gaps = 36/326 (11%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
T N +I G K A E+ K + G + T+ + AL + A S
Sbjct: 80 TRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYF 139
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLC 313
E M D+ + II K G+ EA ++ RE++ P VV + ++ S C
Sbjct: 140 EIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYC 199
Query: 314 --QEDETVKLALDML---------------------DDFSGEA-------RKYAIKP--- 340
+ E K D++ EA +K ++P
Sbjct: 200 IYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIV 259
Query: 341 -FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
++S++ + R A+ + +KM P +N++I AY AG + A+ +L M
Sbjct: 260 SYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEM 319
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
G++PDV + + L++ Q+ IL A+ L+ V Y++ I+ Y ++
Sbjct: 320 EKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDY 379
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLI 485
+ AL+L M++ V+P+ YN LI
Sbjct: 380 EKALELYTSMRESNVKPDAVTYNILI 405
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 105/264 (39%), Gaps = 36/264 (13%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGD--YGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
LN +I K+G+ A E+FN + C + TY + + + ++ +
Sbjct: 154 LNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDL 213
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSL----- 312
M+ G P+ ++ + G +EA ++ L ++ + P L+++
Sbjct: 214 MVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQ 273
Query: 313 ---------------CQEDETVKLAL-------DMLDDFSG---EARKYAIKP----FSS 343
C+ ++ AL ML + G E K I+P S+
Sbjct: 274 PEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSIST 333
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
++ + R + + +T+L S G +NS I +Y GD A+E+ MR
Sbjct: 334 LLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESN 393
Query: 404 LKPDVYTYTGLMSGYANGGQMEEA 427
+KPD TY L+SG + G+ E+
Sbjct: 394 VKPDAVTYNILISGSSKLGKYTES 417
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 89/242 (36%), Gaps = 73/242 (30%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG----------DM- 389
+ +IR R V A+ L +M P ++NS+I A+S+AG DM
Sbjct: 14 YGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDML 73
Query: 390 ------------------------TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG---- 421
A+E+ K M G+ PD+ T+ ++S NG
Sbjct: 74 RAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYS 133
Query: 422 -------------------------------GQMEEACEILNEAKKNHSRLSP--VTYHT 448
GQ EA E+ N ++ ++ P VTY +
Sbjct: 134 KAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTS 193
Query: 449 LIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLK 508
++ YC + + + + M GV+PN+ YN L+ + + + R A + ++
Sbjct: 194 IMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMH-REALAIFNLIKKN 252
Query: 509 GL 510
GL
Sbjct: 253 GL 254
Score = 42.0 bits (97), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 53/116 (45%)
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
N ++ +I Y++ + A + M+ KPD Y L+ ++ GQ A I+
Sbjct: 11 NDIYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIME 70
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ + + TY+ +I + AL+L +M + GV P++ +N ++ +L
Sbjct: 71 DMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSAL 126
>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
Length = 806
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 155/330 (46%), Gaps = 12/330 (3%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
K GK + A ++ K + G N T I L K A V + M+ G D
Sbjct: 442 LCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELD 501
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC---QEDETVKLAL 323
S +I CK K +EA ++ + P L+ + C + +ET L
Sbjct: 502 SITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHL-- 559
Query: 324 DMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAY 383
LD E + I + ++I C+ KD+ AK L++++ G P ++N++I Y
Sbjct: 560 --LDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGY 617
Query: 384 SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
+ GD++ A++ ++ M+S G++P TY LM + G +EEA I ++A++N+ L
Sbjct: 618 GRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGV 677
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
+ Y +I+GYCKL + A+ EM+ G+ PN Y L+ + K+ + A KL +
Sbjct: 678 IGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYS-KSGNSEEASKLFD 736
Query: 504 DMRLKGLHLNGITRALIRA----VKELEED 529
+M G+ + IT + A V L++D
Sbjct: 737 EMVGSGVIPDNITYGTLIARCSEVNSLDKD 766
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 175/383 (45%), Gaps = 17/383 (4%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVL-TVEILNELIALFSKLGKGKAAFEVFN 221
A++KA+C + GK V A ++++ E+ G+ TV N L+ K G+ + AF +
Sbjct: 226 AMIKALCKA-GK--VDAGFEMLAELWRA--GLQPTVVTYNVLMDALCKSGRVEEAFRLKG 280
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ G + T+ I L+R + F V ++M + G P+ ++I W C+ G
Sbjct: 281 RMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKG 340
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+A ++ KKM P + +LC+E E ++ A +L+D F
Sbjct: 341 HCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGE-MERAERILEDMLSIGMTVHCGLF 399
Query: 342 SSVIRSLC-RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++V+ L R + + ++ ++M++ G P + + + + K G A+ +
Sbjct: 400 NTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTL 459
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
++GL ++ T L+ G G M+EA +++ L +TY+ +IRG CK + +
Sbjct: 460 NKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKME 519
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLC--------LKALDWRTAEKLLEDMRLKGLHL 512
A+KL +M G +P++ +N L+ + C LD E L D+ G +
Sbjct: 520 EAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTII 579
Query: 513 NGITRAL-IRAVKELEEDAIENG 534
+G +A IR KE + ++ G
Sbjct: 580 DGHCKAKDIRKAKEYLTELMDRG 602
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 103/230 (44%), Gaps = 10/230 (4%)
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI-SEGP 369
SLC+ A D S +IK ++ + +L R + A+ + +M S
Sbjct: 165 SLCR-------AADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNV 217
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
+ ++I A KAG + EML + GL+P V TY LM G++EEA
Sbjct: 218 ALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFR 277
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ ++ S VT+ LI G + E F +L EM+ +GV PN YN+LI C
Sbjct: 278 LKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHC 337
Query: 490 LKALDWRTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIENGEALVE 539
K A +L ++M LK + +T LI A +E +E E ++E
Sbjct: 338 RKG-HCSQALRLFDEMVLKKMKPTAVTYNLI-AKALCKEGEMERAERILE 385
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 9/177 (5%)
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
R L R+ VH +T + P + G + A + +++ SRG
Sbjct: 123 RLLSRLLHVHPLRTAAEAVADAASTPSSDFLIHTFITSPAQGSLCRAADAFRVLSSRGAP 182
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS-RLSPVTYHTLIRGYCKLEEFDCALK 464
P + T + GQ++ A E+ +E +++ + L+ +Y +I+ CK + D +
Sbjct: 183 PSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFE 242
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG-LHLNGITRALI 520
+L E+ G+QP V YN L+ +LC + ++ E RLKG + G+T +++
Sbjct: 243 MLAELWRAGLQPTVVTYNVLMDALC-------KSGRVEEAFRLKGRMEQGGMTPSVV 292
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/253 (18%), Positives = 105/253 (41%), Gaps = 2/253 (0%)
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE-KKMYPPQSVVAFLISSLCQEDETVK 320
G+ P + + + G+ A V+ RE + + + +I +LC+ + V
Sbjct: 180 GAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKALCKAGK-VD 238
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
+ML + + + ++ ++ +LC+ V A L +M G P F +I
Sbjct: 239 AGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILI 298
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ ++ +L+ M G+ P+ Y L+ + G +A + +E +
Sbjct: 299 NGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMK 358
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+ VTY+ + + CK E + A ++L +M +G+ + +N ++ L + +
Sbjct: 359 PTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVS 418
Query: 501 LLEDMRLKGLHLN 513
+ +M +G+ N
Sbjct: 419 ITNEMVTRGMRPN 431
>gi|356527777|ref|XP_003532484.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 583
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 162/388 (41%), Gaps = 50/388 (12%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
L+ A+ K + AL V + G K +L LN +I FS+ GK A ++F K
Sbjct: 62 TLVAALTRQKRFKSIPALLSKVADNGMKPDSIL----LNAMINAFSESGKVDEAMKIFQK 117
Query: 223 FGDYGCVA------------------------------------NQETYYFTIEALSRRK 246
+YGC N TY I+A +K
Sbjct: 118 MKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQDENVKPNDRTYNILIQAWCTKK 177
Query: 247 IFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVA 306
+ AW+V KM+ +G PD + + + G+ + A + + P +
Sbjct: 178 KLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETERAERLILKMPYNIVKPNERTCG 237
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLS 362
+IS C+E + AL L ++ + P F+S+I+ D +G L+
Sbjct: 238 IIISGYCKEGNMPE-ALRFLYRM----KELGVDPNPVVFNSLIKGYLDTTDTNGVDEALT 292
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG 422
M G P F+++++A+S AG M E+ M G++PD++ Y+ L GY G
Sbjct: 293 LMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAGIEPDIHAYSILAKGYVRAG 352
Query: 423 QMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
Q +A +L K + + V + T+I G+C + D A +L +M ++G PN+ Y
Sbjct: 353 QPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKMDRAFRLCEKMHEMGTSPNLKTYE 412
Query: 483 KLIQSLCLKALDWRTAEKLLEDMRLKGL 510
LI W+ AE+LL M +G+
Sbjct: 413 TLIWGYGEAKQPWK-AEELLTTMEERGV 439
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 147/306 (48%), Gaps = 9/306 (2%)
Query: 210 LGKGKA--AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDS 267
+GKGK A VFN + G TY + AL+R+K F ++ K+ + G PDS
Sbjct: 33 IGKGKPHEAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDS 92
Query: 268 EKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSL---CQEDETVKLALD 324
+ +I+ F + GK EA ++ +E P S LI + E++KL L+
Sbjct: 93 ILLNAMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKL-LE 151
Query: 325 MLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
M+ E K + ++ +I++ C K + A +L KM++ G P +N++ AY+
Sbjct: 152 MMGQ--DENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYA 209
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV 444
+ G+ A ++ M +KP+ T ++SGY G M EA L K+ +PV
Sbjct: 210 QNGETERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPV 269
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLED 504
+++LI+GY + + + L M++ G++P+V ++ ++ + L E++ D
Sbjct: 270 VFNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGL-MENCEEIFND 328
Query: 505 MRLKGL 510
M G+
Sbjct: 329 MVKAGI 334
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 4/102 (3%)
Query: 335 KYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
KY ++P F+++I C + A L KM G P + ++I Y +A
Sbjct: 366 KYGVQPNVVIFTTIISGWCAAGKMDRAFRLCEKMHEMGTSPNLKTYETLIWGYGEAKQPW 425
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
A E+L M RG+ P++ T + + G +EA ILN
Sbjct: 426 KAEELLTTMEERGVVPEMSTMQLVADAWRAIGLFKEANRILN 467
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 143/289 (49%), Gaps = 2/289 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N+++ + K+G + A + + + G + TY I +RK D A+ V ++M
Sbjct: 222 NKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPL 281
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G + +I C + EA ++ ++ YP LI +LC + +
Sbjct: 282 KGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSE 341
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
AL+++ + + K I ++ +I SLC + A+ LL +M+ +G P +N++I
Sbjct: 342 -ALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALI 400
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ Y K G + A+++++LM SR L+P+ TY L+ GY + +A +LN+ +
Sbjct: 401 NGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCK-RNVHKAMGVLNKMLERKVL 459
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
VTY++LI G C+ FD A +LL+ M D G+ P+ Y +I SLC
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLC 508
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 130/274 (47%), Gaps = 2/274 (0%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A ++F K D C TY I+AL + A ++ ++M E G P+ +I
Sbjct: 307 AMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLID 366
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
C K ++A + EK + P LI+ C+ ++ ALD+++ +
Sbjct: 367 SLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRG-MIEDALDVVELMESRNLR 425
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+ ++ +I+ C+ ++VH A +L+KM+ P +NS+I ++G+ A +
Sbjct: 426 PNTRTYNELIKGYCK-RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
L LM RGL PD +TYT ++ ++EEAC++ + ++ + V Y LI GYCK
Sbjct: 485 LSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCK 544
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + A +L +M PN +N LI LC
Sbjct: 545 AGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLC 578
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 192/446 (43%), Gaps = 54/446 (12%)
Query: 90 ESKEEEAYEIDGDKLE-----NVLSLLQSSVDGYLESSLDSFELDLHEDFVLKVLETPLV 144
+ K E+A E+ G LE NV++ + ++GY + + LD+ E L+
Sbjct: 371 QCKLEKARELLGQMLEKGLMPNVITY-NALINGYCKRGMIEDALDVVE----------LM 419
Query: 145 LGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELI 204
NL + + L+K C K+ V+ ++ ++ E+ K + V N LI
Sbjct: 420 ESRNL-----RPNTRTYNELIKGYC----KRNVHKAMGVLNKMLER-KVLPDVVTYNSLI 469
Query: 205 ALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL 264
+ G +A+ + + D G V + TY I++L + K + A + + + + +
Sbjct: 470 DGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVI 529
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALD 324
P+ +I +CK GK EAH++ K P LI LC + + + L
Sbjct: 530 PNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATL- 588
Query: 325 MLDDFSGEARKYAIKPFSS----VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
+ K ++P S +I L + D A +M+S G P + + I
Sbjct: 589 ----LEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFI 644
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
Y + G + A +M+ M+ G+ PD++TY+ L+ GY + G+ A +L
Sbjct: 645 QTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCE 704
Query: 441 LSPVTYHTLIR---------------GYC---KLEEFDCALKLLNEMKDVGVQPNVDEYN 482
S T+ +LI+ G C + EFD ++LL +M + GV PN Y
Sbjct: 705 PSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYE 764
Query: 483 KLIQSLCLKALDWRTAEKLLEDMRLK 508
KL+ +C + + R AEK+ + M+ K
Sbjct: 765 KLMLGIC-EIGNLRVAEKVFDHMQQK 789
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 169/382 (44%), Gaps = 26/382 (6%)
Query: 155 WVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEK--EKGVLTVEILNELIALFSKLGK 212
+ T L+KA+C S K E ++VKE+ EK + + T +L + + KL K
Sbjct: 320 YPTVRTYTVLIKALCGSERKSEA---LNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEK 376
Query: 213 GKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGK 272
+ E+ + + G + N TY I +R + + A V E M P++ +
Sbjct: 377 AR---ELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNE 433
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDF 329
+I +CK K V+ + E+K+ P LI C+ D +L L +++D
Sbjct: 434 LIKGYCKRNVHKAMGVLNKML-ERKVLPDVVTYNSLIDGQCRSGNFDSAYRL-LSLMND- 490
Query: 330 SGEARKYAIKP--FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG 387
R P ++S+I SLC+ K V A L + + P ++ ++I Y KAG
Sbjct: 491 ----RGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAG 546
Query: 388 DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV--T 445
+ A ML+ M S+ P+ T+ L+ G G+++EA L E K L P T
Sbjct: 547 KVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEA--TLLEEKMVKIDLQPTVST 604
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
LI K +FD A + +M G +P+ Y IQ+ C + + AE ++ M
Sbjct: 605 DTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREG-RLQDAEDMVAKM 663
Query: 506 RLKGLHLNGIT-RALIRAVKEL 526
+ G+ + T +LI+ +L
Sbjct: 664 KENGVSPDLFTYSSLIKGYGDL 685
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 122/255 (47%), Gaps = 1/255 (0%)
Query: 235 YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR 294
Y + +L+R + D V +M+E P+ K+++ +CK G +EA+ ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245
Query: 295 EKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDV 354
E + P LI CQ + + A + + + + ++ +I LC + +
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKD-LDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRI 304
Query: 355 HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
A L KM + P + +I A + + A+ ++K M +G+KP+++TYT L
Sbjct: 305 DEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVL 364
Query: 415 MSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV 474
+ + ++E+A E+L + + + +TY+ LI GYCK + AL ++ M+ +
Sbjct: 365 IDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNL 424
Query: 475 QPNVDEYNKLIQSLC 489
+PN YN+LI+ C
Sbjct: 425 RPNTRTYNELIKGYC 439
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 39/236 (16%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
K I +++++ SL R V K + +M+ + P +N +++ Y K G++ A +
Sbjct: 180 KLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQ 239
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+ ++ GL PD +TYT L+ GY ++ A ++ E R + V Y LI G C
Sbjct: 240 YVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLC 299
Query: 455 -------------KLEEFDC----------------------ALKLLNEMKDVGVQPNVD 479
K+++ DC AL L+ EM++ G++PN+
Sbjct: 300 VERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIH 359
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAV--KELEEDAIE 532
Y LI SLC + A +LL M KGL N IT ALI + + EDA++
Sbjct: 360 TYTVLIDSLCSQC-KLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALD 414
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 98/268 (36%), Gaps = 53/268 (19%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKI--------------- 247
LI + LG+ +AF V + D GC +Q T+ I+ L K
Sbjct: 678 LIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSN 737
Query: 248 ---FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSV 304
FD + EKM+E G P+++ K++ C+ G + A V+ ++K+ P +
Sbjct: 738 MMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSEL 797
Query: 305 VAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM 364
V F++++ C+++ + A ++ M
Sbjct: 798 V-----------------------------------FNALLSCCCKLEKHNEAAKVVDDM 822
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
I G P +I K G+ + + + G D + ++ G G +
Sbjct: 823 ICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLV 882
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRG 452
E E+ N +KN S TY LI G
Sbjct: 883 EAFYELFNVMEKNGCTFSSQTYSLLIEG 910
>gi|293335157|ref|NP_001169529.1| uncharacterized protein LOC100383403 [Zea mays]
gi|224029903|gb|ACN34027.1| unknown [Zea mays]
gi|414887232|tpg|DAA63246.1| TPA: hypothetical protein ZEAMMB73_160132 [Zea mays]
Length = 819
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 152/327 (46%), Gaps = 14/327 (4%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
+ N LI ++ G+ A + + ++ TY I A + A +C
Sbjct: 187 NTDTYNSLIHAHARAGQWCWAINIMDDMQRAAIPPSRTTYNNVINACGAAGNWKKALELC 246
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+KM E G PD ++S F G + +A + + + K+ P + +I L
Sbjct: 247 KKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIVIHCL--- 303
Query: 316 DETVKLAL--DMLDDF-SGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEG 368
VK+ L + ++ F S R+ P ++S++ S K + M++EG
Sbjct: 304 ---VKIGLYGEAIELFNSMRERRTTCHPDVVTYTSIMYSYSVCGQAENCKAVFDIMVAEG 360
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P +N+++ AY+ G T A+E KL++ GL+PD+ +YT L++ Y Q E+A
Sbjct: 361 VRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGLRPDIVSYTSLLNAYGRSAQPEKAR 420
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
E+ NE +KN + + V+Y+ LI Y A+ LL+EM+ G+QP+V + L+ +
Sbjct: 421 EVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPDVISISTLLTA- 479
Query: 489 CLKALDWRTAEKLLEDMRLKGLHLNGI 515
C + + +L + +G+ LN +
Sbjct: 480 CGRCKQLTKIDIILAAAKSRGIQLNTV 506
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 147/344 (42%), Gaps = 6/344 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ALL A S E + ++K+ G + V +LN + + + + A EVFN
Sbjct: 369 NALLGAYASHGMHTEALETFKLLKQNGLRPDIVSYTSLLNA----YGRSAQPEKAREVFN 424
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ C N+ +Y I+A + A S+ +M + G PD + +++ +
Sbjct: 425 EMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPDVISISTLLTACGRCK 484
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ + ++ A+ + + I S + K + +G + A+ +
Sbjct: 485 QLTKIDIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALVLYTSMRAGNVKPDAVT-Y 543
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+ +I C++ + M+ V++SVI +Y K G +T A M+
Sbjct: 544 NILISGSCKLGRYVESLKFFEDMLDLNIHLTKEVYSSVICSYVKQGKLTEAASTFNSMKE 603
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G PDV TYT L+ Y++ G A ++ E + N ++ + +L+ K + +
Sbjct: 604 TGCFPDVLTYTTLIKAYSDDGSWRRAWDLFKEMENNGTQPDAIVCSSLMEALNKGGQPER 663
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
L+L+ MK +Q N Y ++I S C DW+TA +++E +
Sbjct: 664 VLQLIEFMKQKKIQLNQKAYFEIISS-CTMLRDWKTASQIIEHL 706
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 140/348 (40%), Gaps = 37/348 (10%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I G K A E+ K + G + T+ + A + A + E M
Sbjct: 227 NNVINACGAAGNWKKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKS 286
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF----LISSLCQED 316
+ PD+ + +I K G EA ++ RE++ VV + S+C +
Sbjct: 287 SKVAPDTCTMNIVIHCLVKIGLYGEAIELFNSMRERRTTCHPDVVTYTSIMYSYSVCGQA 346
Query: 317 ETVKLALDML---------------------DDFSGEA-------RKYAIKP----FSSV 344
E K D++ EA ++ ++P ++S+
Sbjct: 347 ENCKAVFDIMVAEGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGLRPDIVSYTSL 406
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
+ + R A+ + ++M P +N++I AY AG + A+ +L M G+
Sbjct: 407 LNAYGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGI 466
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
+PDV + + L++ Q+ + IL AK +L+ V Y++ I Y L ++ AL
Sbjct: 467 QPDVISISTLLTACGRCKQLTKIDIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALV 526
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
L M+ V+P+ YN LI C K + + K EDM +HL
Sbjct: 527 LYTSMRAGNVKPDAVTYNILISGSC-KLGRYVESLKFFEDMLDLNIHL 573
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 128/309 (41%), Gaps = 2/309 (0%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
+S G+ + VF+ G N +Y + A + + A + + + G PD
Sbjct: 340 YSVCGQAENCKAVFDIMVAEGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGLRPD 399
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
+++ + + + ++A V+ R+ P + LI + +K A+ +L
Sbjct: 400 IVSYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAG-MLKEAISLL 458
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
+ + + + S+++ + R K + +L+ S G +NS I +Y
Sbjct: 459 HEMEQDGIQPDVISISTLLTACGRCKQLTKIDIILAAAKSRGIQLNTVAYNSGIGSYLSL 518
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
GD A+ + MR+ +KPD TY L+SG G+ E+ + + + L+ Y
Sbjct: 519 GDYKKALVLYTSMRAGNVKPDAVTYNILISGSCKLGRYVESLKFFEDMLDLNIHLTKEVY 578
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
++I Y K + A N MK+ G P+V Y LI++ WR A L ++M
Sbjct: 579 SSVICSYVKQGKLTEAASTFNSMKETGCFPDVLTYTTLIKAYSDDG-SWRRAWDLFKEME 637
Query: 507 LKGLHLNGI 515
G + I
Sbjct: 638 NNGTQPDAI 646
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 6/162 (3%)
Query: 332 EARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG 387
E +++ KP ++S+I + R A ++ M PP +N+VI+A AG
Sbjct: 178 EMQEWRCKPNTDTYNSLIHAHARAGQWCWAINIMDDMQRAAIPPSRTTYNNVINACGAAG 237
Query: 388 DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYH 447
+ A+E+ K M G+ PD+ T+ ++S + NG Q +A K + T +
Sbjct: 238 NWKKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMN 297
Query: 448 TLIRGYCKLEEFDCALKLLNEMKD--VGVQPNVDEYNKLIQS 487
+I K+ + A++L N M++ P+V Y ++ S
Sbjct: 298 IVIHCLVKIGLYGEAIELFNSMRERRTTCHPDVVTYTSIMYS 339
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 72/166 (43%), Gaps = 1/166 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+ +IR R V A+ L +M P +NS+I A+++AG A+ ++ M+
Sbjct: 156 YGMMIRLHARHNKVDQARGLFFEMQEWRCKPNTDTYNSLIHAHARAGQWCWAINIMDDMQ 215
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+ P TY +++ G ++A E+ + +N +T++ ++ + ++
Sbjct: 216 RAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYS 275
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
A+ MK V P+ N +I L L + A +L MR
Sbjct: 276 KAIAYFEIMKSSKVAPDTCTMNIVIHCLVKIGL-YGEAIELFNSMR 320
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 1/157 (0%)
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS-EGPPPGNAVFNSVISAYSKAGDMTP 391
A ++A + F +IR + + A + M + E N ++ +I +++ +
Sbjct: 112 AGRFARRNFPLLIREIAISGSLKHAVHVFRWMKNQENYCARNDIYGMMIRLHARHNKVDQ 171
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
A + M+ KP+ TY L+ +A GQ A I+++ ++ S TY+ +I
Sbjct: 172 ARGLFFEMQEWRCKPNTDTYNSLIHAHARAGQWCWAINIMDDMQRAAIPPSRTTYNNVIN 231
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ AL+L +M + GV P++ +N ++ +
Sbjct: 232 ACGAAGNWKKALELCKKMTENGVGPDLITHNIVLSAF 268
>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
[Vitis vinifera]
gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 157/336 (46%), Gaps = 11/336 (3%)
Query: 189 EKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
++EK +T +I + + ++ K A VF K +Y C +Q++Y L
Sbjct: 77 KEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKMKEYECEPSQKSYITVFAILVGENQL 136
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS-VVAF 307
A M E G P + +I CK +A + + PP S
Sbjct: 137 KLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPDSYTYGT 196
Query: 308 LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
LI+ LC+ + + A ++ + +A + ++S+I LC+ KD+ A LL +M S+
Sbjct: 197 LINGLCRLGK-IGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASK 255
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P ++S++ + K+G + A+E+L +M SR P++ TY+ L+ G G+++EA
Sbjct: 256 GIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEA 315
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN-------VDE 480
EIL+ K R Y +I G+C + +F A L+EM G+ PN V
Sbjct: 316 VEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRI 375
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+N ++Q LC + + A +L MR +G+ ++ T
Sbjct: 376 HNIVVQGLCTEHPN--RAFQLYLSMRTRGISIDAKT 409
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 154/391 (39%), Gaps = 59/391 (15%)
Query: 145 LGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVK--------EIGEKEKGVLT 196
L E L+C K + + + +IC + G+ V+ D V+ E +K +T
Sbjct: 68 LAEELLCRMKEEKCNITEDIFLSICRAYGR--VHKPLDAVRVFRKMKEYECEPSQKSYIT 125
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRK-IFDWAWSVC 255
V A+ + K A + + G + + I+AL + D A +
Sbjct: 126 V------FAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIF 179
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+M G PDS G +I+ C+ GK EA ++ K P LI LCQ
Sbjct: 180 REMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLIHGLCQS 239
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ + A+ +L++ + + K + +SS++ C+ A LL M+S P
Sbjct: 240 KD-LDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMIT 298
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+++++ K G + A+E+L M+ +GL+PD Y ++SG+ + + EA L+E
Sbjct: 299 YSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMV 358
Query: 436 KN-----------HSRLSPV------------------------------TYHTLIRGYC 454
H R+ + T+ +L+ +C
Sbjct: 359 LGGISPNRLTWSLHVRIHNIVVQGLCTEHPNRAFQLYLSMRTRGISIDAKTFDSLVNYFC 418
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
+ A L++EM G P+ +N ++
Sbjct: 419 NKGDLHKAAHLVDEMVLDGCIPDEVTWNAVV 449
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 125/300 (41%), Gaps = 12/300 (4%)
Query: 161 VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVF 220
++ L+KA+C + G + A I +E+ + + LI +LGK A E+F
Sbjct: 158 LNVLIKALCKNSGTMD--AALRIFREMPNRGCPPDSY-TYGTLINGLCRLGKIGEAKELF 214
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ C TY I L + K D A + E+M G P+ ++ CK
Sbjct: 215 KEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKS 274
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
G + A + + ++ P + L+ LC+E + ++ A+++LD + +
Sbjct: 275 GCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGK-LQEAVEILDRMKLQGLRPDAGL 333
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN-------AVFNSVISAYSKAGDMTPAM 393
+ +I C + H A L +M+ G P + N V+ A
Sbjct: 334 YGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHP-NRAF 392
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
++ MR+RG+ D T+ L++ + N G + +A +++E + VT++ ++ +
Sbjct: 393 QLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEVTWNAVVCAF 452
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 87/211 (41%), Gaps = 16/211 (7%)
Query: 209 KLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSE 268
K G A E+ + + N TY + L + A + ++M G PD+
Sbjct: 273 KSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAG 332
Query: 269 KVGKIISWFCKGGKAKEA------HVVYTLAREKKMYPPQ-SVVAFLISSLCQEDETVKL 321
GKIIS FC K EA V+ ++ + + + ++ LC E
Sbjct: 333 LYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHPNRAF 392
Query: 322 ALDMLDDFSGEARKYAI--KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
L + S R +I K F S++ C D+H A L+ +M+ +G P +N+V
Sbjct: 393 QLYL----SMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEVTWNAV 448
Query: 380 ISAYSKAGDMTPAMEMLK---LMRSRGLKPD 407
+ A+ + + E+++ ++ R + PD
Sbjct: 449 VCAFWDRRKVRESAELVQVELMVEHRKMGPD 479
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 162/396 (40%), Gaps = 49/396 (12%)
Query: 152 FFKWVTSGV------VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVL-TVEILNELI 204
F K + SGV + LL +C KE L D V + +GVL + N I
Sbjct: 204 FGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIK-----RGVLPNLFTYNFFI 258
Query: 205 ALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL 264
+ G+ AA + + D G + TY + I L + F A K++ G
Sbjct: 259 QGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLE 318
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALD 324
PDS +I+ +CKGG + A + A P + LI LC E ET + AL
Sbjct: 319 PDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNR-ALA 377
Query: 325 MLDDFSG------------------------EARKYA-----------IKPFSSVIRSLC 349
+ ++ G EA + A ++ F+ ++ LC
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLC 437
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
+M V A L+ MIS+G P FN +I YS M A+E+L +M G+ PDVY
Sbjct: 438 KMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVY 497
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
TY L++G + E+ E + + T++ L+ C+ + D AL LL EM
Sbjct: 498 TYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEM 557
Query: 470 KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
K+ V P+ + LI C K D A L M
Sbjct: 558 KNKSVNPDAVTFGTLIDGFC-KNGDLDGAYTLFRKM 592
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 118/304 (38%), Gaps = 37/304 (12%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
F + + AA + N GC N Y + D + + KM+ +G
Sbjct: 156 FCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLC 215
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
K++ CK G KE + ++ + P F I
Sbjct: 216 LSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFI----------------- 258
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
+ LC+ ++ A ++ ++I +GP P +N +I K
Sbjct: 259 -------------------QGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKN 299
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
A L + + GL+PD +TY L++GY GG ++ A IL A N TY
Sbjct: 300 SKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTY 359
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
+LI G C E + AL L NE G++PNV YN LI+ L + L A+ L +M
Sbjct: 360 RSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQ-LASEMS 418
Query: 507 LKGL 510
KGL
Sbjct: 419 EKGL 422
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 133/326 (40%), Gaps = 47/326 (14%)
Query: 191 EKGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
EKG++ V+ N L+ K+G A + G + T+ I S + +
Sbjct: 419 EKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKME 478
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A + + M++ G PD +++ CK K ++ Y EK P L+
Sbjct: 479 NALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILL 538
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM----- 364
SLC+ + K AL +L++ ++ F ++I C+ D+ GA TL KM
Sbjct: 539 ESLCRYHKLDK-ALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYM 597
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
+S P +N +I A+++ ++T A ++ + M R L PD YTY
Sbjct: 598 VSCSTP----TYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTY------------- 640
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
RL ++ G+CK D K L EM + G P++ ++
Sbjct: 641 ---------------RL-------MVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRV 678
Query: 485 IQSLCLKALDWRTAEKLLEDMRLKGL 510
I LC++ + A ++ M KGL
Sbjct: 679 INCLCVEDRVYEAA-GIIHRMVQKGL 703
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 95/243 (39%), Gaps = 44/243 (18%)
Query: 313 CQEDETVKLALDMLDDFSGE-ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE-GPP 370
CQ+D AL+M + E K+ + + S+I L + +L M G
Sbjct: 16 CQKDPMK--ALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNH 73
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
V+ + Y + G + A+ + + M +P V++Y +MS + G ++A ++
Sbjct: 74 MLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKV 133
Query: 431 LNEAKKNHSRLSPVTYHTLIR--GYCKLEEFDCALKLLNEMKDVGVQPNV---------- 478
+ ++P Y IR +C+ AL+LLN M G + NV
Sbjct: 134 YMRMRDRG--ITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGF 191
Query: 479 ------DE-------------------YNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
DE +NKL+ LC K D + EKLL+ + +G+ N
Sbjct: 192 YEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKG-DVKECEKLLDKVIKRGVLPN 250
Query: 514 GIT 516
T
Sbjct: 251 LFT 253
>gi|224097576|ref|XP_002310993.1| predicted protein [Populus trichocarpa]
gi|222850813|gb|EEE88360.1| predicted protein [Populus trichocarpa]
Length = 877
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 153/340 (45%), Gaps = 16/340 (4%)
Query: 187 IGEKEKGVLTVEILNE------------LIALFSKLGKGKAAFEVFNKFGDYGCVANQET 234
IG +EK ++ + L E LI +++K+GK A EV G N +T
Sbjct: 426 IGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMMESAGIKHNMKT 485
Query: 235 YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA-HVVYTLA 293
Y I + K + A++V E +I+ G PD II FC G A H+V +
Sbjct: 486 YSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEM- 544
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
++K+ P +I + E ++ AL++ D + F++++ L +
Sbjct: 545 QKKRHRPTSRTFMPIIHGFARAGE-MRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQ 603
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
+ A +L +M G P + ++++ Y+ GD A E +R+ GL+ DV+TY
Sbjct: 604 MEKAVEILDEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEA 663
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
L+ G+M+ A + E + + Y+ LI G+ + + A L+ +MK G
Sbjct: 664 LLKACCKSGRMQSALAVTREMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEG 723
Query: 474 VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
VQP++ Y I + C KA D A K +++M G+ N
Sbjct: 724 VQPDIHTYTSFINA-CCKAGDMLRATKTIQEMEALGVKPN 762
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 188/436 (43%), Gaps = 67/436 (15%)
Query: 60 ESSFSPETDFSSRSFG--ENEYAQMDPSADAVE-SKEEEAYEIDGDKLENVLSLLQSSVD 116
E F+P S S+G N Y +M + A+E SK E+ I + S+L ++
Sbjct: 441 ECGFAP----SVISYGCLINMYTKMGKVSKALEVSKMMESAGIKHNM--KTYSML---IN 491
Query: 117 GYLESSLDSFELDLHEDFVLKVLETPLVLGENLVCFFKWVTSGVVDALLKAICSSVGKKE 176
G+L+ + + ED + L+ +VL N++ KA C G
Sbjct: 492 GFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNII---------------KAFC---GMGN 533
Query: 177 VYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYY 236
+ +VKE+ +K++ T +I F++ G+ + A E+F+ GC+ T+
Sbjct: 534 MDRAIHMVKEM-QKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFN 592
Query: 237 FTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREK 296
+ L ++ + A + ++M G PD I++ + G +A +T R +
Sbjct: 593 ALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNE 652
Query: 297 KMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHG 356
+ LD F+ EA ++++ C+ +
Sbjct: 653 GLE--------------------------LDVFTYEA----------LLKACCKSGRMQS 676
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A + +M ++ P V+N +I +++ GD+ A ++++ M+ G++PD++TYT ++
Sbjct: 677 ALAVTREMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDIHTYTSFIN 736
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
G M A + + E + + + TY TLI G+ + AL+ EMK G++P
Sbjct: 737 ACCKAGDMLRATKTIQEMEALGVKPNVKTYTTLIHGWACASLPEKALRCFEEMKLAGLKP 796
Query: 477 NVDEYNKLIQSLCLKA 492
+ Y+ L+ SL +A
Sbjct: 797 DKAVYHCLMTSLLSRA 812
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 136/278 (48%), Gaps = 7/278 (2%)
Query: 248 FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF 307
D A S+ +M E G + +++ + G ++ +V+ +E P SV+++
Sbjct: 394 MDRAESLVREMEEEGIDAPIDIYHTMMNGYTMIGNEEKCLIVFKRLKECGFAP--SVISY 451
Query: 308 --LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI 365
LI+ + + K AL++ K+ +K +S +I ++KD A T+ +I
Sbjct: 452 GCLINMYTKMGKVSK-ALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDVI 510
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
+G P ++N++I A+ G+M A+ M+K M+ + +P T+ ++ G+A G+M
Sbjct: 511 KDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMR 570
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
A EI + +++ + T++ L+ G + + + A+++L+EM GV P+ Y ++
Sbjct: 571 RALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIM 630
Query: 486 QSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRA 522
D A + +R +GL L+ T AL++A
Sbjct: 631 NGYAALG-DTGKAFEYFTKLRNEGLELDVFTYEALLKA 667
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 6/126 (4%)
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P F ++ Y++ GDM A + + MR RG+ P + YT L+ YA G MEEA
Sbjct: 300 PARREFGLMVGYYARRGDMHRARQTFESMRVRGIYPSSHVYTSLIHAYAVGRDMEEALSC 359
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLE------EFDCALKLLNEMKDVGVQPNVDEYNKL 484
+ + K+ +S VTY ++ G+ K+ D A L+ EM++ G+ +D Y+ +
Sbjct: 360 VRKMKEEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDIYHTM 419
Query: 485 IQSLCL 490
+ +
Sbjct: 420 MNGYTM 425
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
+K A + F ++ R D+H A+ M G P + V+ S+I AY+ DM A+
Sbjct: 298 KKPARREFGLMVGYYARRGDMHRARQTFESMRVRGIYPSSHVYTSLIHAYAVGRDMEEAL 357
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC-----EILNEAKKNHSRLSPV-TYH 447
++ M+ G++ + TY+ ++ G+A G +++C E L + +P+ YH
Sbjct: 358 SCVRKMKEEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDIYH 417
Query: 448 TLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
T++ GY + + L + +K+ G P+V Y LI
Sbjct: 418 TMMNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLIN 456
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 116/307 (37%), Gaps = 60/307 (19%)
Query: 245 RKIFDWA---WSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPP 301
RK+ D W E P + G ++ ++ + G A + R + +YP
Sbjct: 277 RKVLDTQPENWQAVVSAFERIKKPARREFGLMVGYYARRGDMHRARQTFESMRVRGIYPS 336
Query: 302 QSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLL 361
V ++S+I + +D+ A + +
Sbjct: 337 SHV------------------------------------YTSLIHAYAVGRDMEEALSCV 360
Query: 362 SKMISEGPPPGNAVFNSVISAYSKAGD------MTPAMEMLKLMRSRGLKPDVYTYTGLM 415
KM EG ++ V+ ++K G+ M A +++ M G+ + Y +M
Sbjct: 361 RKMKEEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDIYHTMM 420
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
+GY G E+ + K+ S ++Y LI Y K+ + AL++ M+ G++
Sbjct: 421 NGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMMESAGIK 480
Query: 476 PNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH-----LNGITRAL---------IR 521
N+ Y+ LI LK DW A + ED+ GL N I +A I
Sbjct: 481 HNMKTYSMLINGF-LKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIH 539
Query: 522 AVKELEE 528
VKE+++
Sbjct: 540 MVKEMQK 546
>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
Length = 941
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 139/312 (44%), Gaps = 4/312 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI +++K+GK A EV G N +TY I + K + A++V E +I+ G
Sbjct: 475 LINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDG 534
Query: 263 SLPDSEKVGKIISWFCKGGKAKEA-HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
PD II FC G A H+V + +E+ P +I + E ++
Sbjct: 535 LKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKER-CRPTSRTFMPIIHGFARAGE-MRR 592
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
AL++ D + F++++ L + + A +L +M G P + +++
Sbjct: 593 ALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMH 652
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
Y+ GD A E MR+ GL+ DV+TY L+ G+M+ A + E
Sbjct: 653 GYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTREMNAQKIPR 712
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+ Y+ LI G+ + + A L+ +M GVQP++ Y I + C KA D A K
Sbjct: 713 NTFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTSFINA-CCKAGDMLRATKT 771
Query: 502 LEDMRLKGLHLN 513
+E+M G+ N
Sbjct: 772 MEEMEAAGVKPN 783
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 145/333 (43%), Gaps = 40/333 (12%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
+ + ++KA C G + +VKE+ +KE+ T +I F++ G+ + A E+
Sbjct: 541 LYNNIIKAFC---GMGNMDRAIHMVKEM-QKERCRPTSRTFMPIIHGFARAGEMRRALEI 596
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
F+ GC+ T+ + L ++ + A + ++M G PD I+ +
Sbjct: 597 FDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAA 656
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
G +A +T R + + LD F+ EA
Sbjct: 657 LGDTGKAFEYFTKMRNEGL--------------------------QLDVFTYEA------ 684
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
++++ C+ + A + +M ++ P V+N +I +++ GD+ A ++++ M
Sbjct: 685 ----LLKACCKSGRMQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQM 740
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
G++PD++TYT ++ G M A + + E + + + TY TLI G+
Sbjct: 741 NQEGVQPDIHTYTSFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWANASLP 800
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
+ AL E+K G++P+ Y+ L+ SL +A
Sbjct: 801 EKALSCFEELKLAGLKPDKAVYHCLMTSLLSRA 833
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 168/369 (45%), Gaps = 11/369 (2%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEK--EKGVLTVEILNELIALFSKLGKGK 214
+S V +L+ A +VG+ AL V+++ E+ E ++T I+ + F+K G +
Sbjct: 328 SSHVYTSLIHAY--AVGRDMEEAL-SCVRKMNEEGIEMSLVTYSIV---VGGFAKFGNAE 381
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
AA F K + N Y I A + D A ++ +M E G + ++
Sbjct: 382 AADCWFKKAKERHTNLNAYIYGNIIYAYCQACNMDRAEALVREMEEEGIDAPLDIYHTMM 441
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR 334
+ ++ +V+ +E P LI+ + + K AL++
Sbjct: 442 DGYTMIRNEEKCLIVFKRLKECGFAPSVITYGCLINMYTKIGKVSK-ALEVSKMMKSVGI 500
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
K+ +K +S +I ++KD A + +I +G P ++N++I A+ G+M A+
Sbjct: 501 KHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIH 560
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
M+K M+ +P T+ ++ G+A G+M A EI + +++ + T++ L+ G
Sbjct: 561 MVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLV 620
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG 514
+ + + A+++L+EM GV P+ Y ++ D A + MR +GL L+
Sbjct: 621 EKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALG-DTGKAFEYFTKMRNEGLQLDV 679
Query: 515 IT-RALIRA 522
T AL++A
Sbjct: 680 FTYEALLKA 688
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 79/157 (50%)
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
+K + + F ++ R D+H A+ M + G P + V+ S+I AY+ DM A+
Sbjct: 290 KKPSRREFGLMVGYYARRGDMHRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDMEEAL 349
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
++ M G++ + TY+ ++ G+A G E A +AK+ H+ L+ Y +I Y
Sbjct: 350 SCVRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAY 409
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
C+ D A L+ EM++ G+ +D Y+ ++ +
Sbjct: 410 CQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTM 446
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 1/140 (0%)
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P F ++ Y++ GDM A + + MR+RG+ P + YT L+ YA G MEEA
Sbjct: 292 PSRREFGLMVGYYARRGDMHRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDMEEALSC 351
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
+ + + +S VTY ++ G+ K + A + K+ N Y +I + C
Sbjct: 352 VRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAYC- 410
Query: 491 KALDWRTAEKLLEDMRLKGL 510
+A + AE L+ +M +G+
Sbjct: 411 QACNMDRAEALVREMEEEGI 430
>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
Length = 754
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 166/374 (44%), Gaps = 10/374 (2%)
Query: 159 GVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFE 218
G ++ + A+C KE ++D + G K V L+ ++ G
Sbjct: 259 GNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPD----VISYGALLHGYATAGCIAGMDN 314
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+FN G V ++ + I A +R + D + + E M + G PD +IS FC
Sbjct: 315 LFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFC 374
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
+ G+ +A + + + P +V + LI C + VK + D S I
Sbjct: 375 RLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCI 434
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
K F+S+I +LC+ V K ++ +I G P FNS++ Y G+M A+ +L
Sbjct: 435 KFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDS 494
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M S G++PD+YTY L+ GY G++++A + + L+ V+Y+ ++ G +
Sbjct: 495 MESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARR 554
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE-----DMRLKGLHLN 513
A ++ +EM + G+ ++ Y ++ LC A LLE +++ L N
Sbjct: 555 TIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNC-TDEANMLLEKLFSMNVKFDILTFN 613
Query: 514 GITRALIRAVKELE 527
+ RA+ + + E
Sbjct: 614 IVIRAMFKVGRRQE 627
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 135/290 (46%), Gaps = 2/290 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI FSK G+ A ++F K + G + N TY I L + K D A V +M+
Sbjct: 157 NALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVG 216
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P++ +I + G KE+ V+ + P +++LC+ +K
Sbjct: 217 AGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGR-IK 275
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A D+ D + K + + +++ + G L + M+ EG P VFN++I
Sbjct: 276 EARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLI 335
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+AY++ G M ++ M + M +G+ PD+ T++ ++S + G++++A E N
Sbjct: 336 NAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVP 395
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN-VDEYNKLIQSLC 489
Y LI+G C + A +L+++M G+ P + + +I +LC
Sbjct: 396 PDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLC 445
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 147/355 (41%), Gaps = 45/355 (12%)
Query: 200 LNELIALFSKLGKGKA-------AFEVFNKFGDYGC---VANQETYYFTIEALSRRKIFD 249
LNEL++ ++ A A E+F + C TY I R + D
Sbjct: 76 LNELLSALARAPPSAACRDVPALAVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPD 135
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
V +++ TG PD +I F K G+ +AH ++ E+ + P + LI
Sbjct: 136 LGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLI 195
Query: 310 SSLCQEDETVKLALDMLDDFSGEAR-------------------KYAIKPF--------- 341
+ LC+ E K + R K +++ F
Sbjct: 196 NGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLV 255
Query: 342 ------SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+S + +LC+ + A+ + M+ +GP P + +++ Y+ AG + +
Sbjct: 256 PDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNL 315
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
+M G+ PD + + L++ YA G M+++ + + K +T+ T+I +C+
Sbjct: 316 FNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCR 375
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
L D A++ N M D GV P+ Y+ LIQ C + D A++L+ DM KG+
Sbjct: 376 LGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRR-DLVKAKELISDMLSKGI 429
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 122/307 (39%), Gaps = 3/307 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
+ +I+ F +LG+ A E FN D G + Y I+ R+ A + M+
Sbjct: 366 FSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDML 425
Query: 260 ETGSLPDSEKV-GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
G P K II+ CK G+ E V L P L+ C
Sbjct: 426 SKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGN- 484
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+K A+ +LD + I +++++ C+ + A TL M+ + + +N
Sbjct: 485 MKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNI 544
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
++ +A A EM M G+ ++TY ++ G +EA +L + +
Sbjct: 545 ILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMN 604
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
+ +T++ +IR K+ A +L + G+ P + Y +I +L +K + A
Sbjct: 605 VKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNL-IKEESFEDA 663
Query: 499 EKLLEDM 505
+ L M
Sbjct: 664 DNLFSSM 670
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 93/235 (39%), Gaps = 1/235 (0%)
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A + + M G PD ++ +CK G+ +A ++ K++ ++
Sbjct: 488 AVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILH 547
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
L Q T+ +A +M + +I +++V+ LCR A LL K+ S
Sbjct: 548 GLFQARRTI-VAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVK 606
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
FN VI A K G A E+ + + GL P + TY +++ E+A +
Sbjct: 607 FDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNL 666
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
+ +K+ + +IR E A L+++ G+ P + LI
Sbjct: 667 FSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLI 721
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 49/110 (44%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N +I K+G+ + A E+F YG V TY I L + + F+ A ++ M
Sbjct: 612 FNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSME 671
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
++ PDS + +II G+ +A + +K + P + + LI
Sbjct: 672 KSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLI 721
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 157/366 (42%), Gaps = 36/366 (9%)
Query: 190 KEKGVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
K KG L TVE +I F K G KA + + G N + Y I+A +
Sbjct: 266 KLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHI 325
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
A E MIE G PD +IS C+ GK EA + A K + P + L
Sbjct: 326 VKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPL 385
Query: 309 ISSLCQE---DETVKLALDMLDD-----------------FSGEAR----------KYAI 338
I + C++ D ++M + +GE + +
Sbjct: 386 IHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGV 445
Query: 339 KP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
P ++ ++ LC+ + AK LL++M+ + P V+ +++ + + G++ A +
Sbjct: 446 FPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARK 505
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+ +L +G+ P + Y ++ GY G M++A +N KK H TY T+I GY
Sbjct: 506 LFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYV 565
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG 514
K + D A K+ EM + +PNV Y LI C K D + K+ +M+ GL N
Sbjct: 566 KQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKG-DLHRSLKIFREMQACGLVPNV 624
Query: 515 ITRALI 520
+T +++
Sbjct: 625 VTYSIL 630
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 164/353 (46%), Gaps = 25/353 (7%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI+ + GK A ++ + G + N+ +Y I A ++ +D A + +M E
Sbjct: 348 NTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTE 407
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE--T 318
G PD G ++ G+ A + E+ ++P + L+S LC++ +
Sbjct: 408 RGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPA 467
Query: 319 VKLAL-DMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
KL L +MLD ++ P +++++ R ++ A+ L I +G PG
Sbjct: 468 AKLLLAEMLDQ--------SVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGI 519
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+N++I Y K G M AM + M+ R L PD +TY+ ++ GY ++ A ++ E
Sbjct: 520 VGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFRE 579
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
K + + VTY +LI G+C+ + +LK+ EM+ G+ PNV Y+ LI S C +A
Sbjct: 580 MVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEA- 638
Query: 494 DWRTAEKLLEDMRLK---------GLHLNGITRALIRAVKELEEDAIENGEAL 537
A E+M + +NG ++ RA+ E + EN +++
Sbjct: 639 KLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSM 691
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 160/373 (42%), Gaps = 30/373 (8%)
Query: 152 FFKWVTSGVVDALLKAICSS-----VGKKEVYALWDIVKEIGEKEKGVLTVEILNELIAL 206
FF WV+ G + S + + V++ ++V E E+ T E ++ +I
Sbjct: 79 FFDWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQA 138
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEA-------LSRRKIFDWAWSVCEKMI 259
+S G + A E+ Y V TY+ + A L + + A + ++M+
Sbjct: 139 YSDSGLVEKALEL------YYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEML 192
Query: 260 ETGS----LPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
E D+ ++ CK GK +E + + P LI C++
Sbjct: 193 EIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKK 252
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ +++A + + + ++ + ++I C+ D LL +M S G V
Sbjct: 253 GD-MEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQV 311
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N++I A K G + A+E ++ M G KPD+ TY L+SG G++ EA ++L +A
Sbjct: 312 YNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQAL 371
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK---- 491
+ +Y LI YCK +D A L EM + G +P++ Y L+ L +
Sbjct: 372 GKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVD 431
Query: 492 -ALDWRTAEKLLE 503
AL R EK+LE
Sbjct: 432 VALTIR--EKMLE 442
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/342 (19%), Positives = 135/342 (39%), Gaps = 60/342 (17%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ A + K + G + Y + L ++ A + +M++ LPD+
Sbjct: 428 GEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVY 487
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
++ F + G EA ++ L EK M P +I C+ +K A+ ++
Sbjct: 488 ATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFG-MMKDAMACIN--- 543
Query: 331 GEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
+K + P +S+VI + D+ GA+ + +M+ P + S+I+ + +
Sbjct: 544 -RMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRK 602
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
GD+ ++++ + M++ GL P+V TY+ L+ + ++ +A E N + VT+
Sbjct: 603 GDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTF 662
Query: 447 HTLIRGY-------------------------------------------------CKLE 457
+ L+ G+ C+
Sbjct: 663 NYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYG 722
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL--KALDWRT 497
F AL+L N+M G P+ + L+ +CL ++ +W+
Sbjct: 723 MFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWKN 764
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 102/271 (37%), Gaps = 23/271 (8%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I + K G K A N+ ++ TY I+ ++ D A + +M++
Sbjct: 523 NAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVK 582
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
P+ +I+ FC+ G + ++ + + P + LI S C+E + +
Sbjct: 583 MKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLID 642
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTL------------------LS 362
A F E P L +G + +
Sbjct: 643 AA-----SFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFG 697
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG 422
+MIS+G P +A +NS++ + G A+++ M S+G PD ++ L+ G G
Sbjct: 698 RMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEG 757
Query: 423 QMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
+ +E I++ V Y +++ Y
Sbjct: 758 RSKEWKNIVSCNLNERELQIAVNYSSILDQY 788
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 166/374 (44%), Gaps = 10/374 (2%)
Query: 159 GVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFE 218
G ++ + A+C KE ++D + G K V L+ ++ G
Sbjct: 330 GNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPD----VISYGALLHGYATAGCIAGMDN 385
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+FN G V ++ + I A +R + D + + E M + G PD +IS FC
Sbjct: 386 LFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFC 445
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
+ G+ +A + + + P +V + LI C + VK + D S I
Sbjct: 446 RLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCI 505
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
K F+S+I +LC+ V K ++ +I G P FNS++ Y G+M A+ +L
Sbjct: 506 KFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDS 565
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M S G++PD+YTY L+ GY G++++A + + L+ V+Y+ ++ G +
Sbjct: 566 MESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARR 625
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE-----DMRLKGLHLN 513
A ++ +EM + G+ ++ Y ++ LC A LLE +++ L N
Sbjct: 626 TIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCT-DEANMLLEKLFSMNVKFDILTFN 684
Query: 514 GITRALIRAVKELE 527
+ RA+ + + E
Sbjct: 685 IVIRAMFKVGRRQE 698
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 135/290 (46%), Gaps = 2/290 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI FSK G+ A ++F K + G + N TY I L + K D A V +M+
Sbjct: 228 NALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVG 287
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P++ +I + G KE+ V+ + P +++LC+ +K
Sbjct: 288 AGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGR-IK 346
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A D+ D + K + + +++ + G L + M+ EG P VFN++I
Sbjct: 347 EARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLI 406
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+AY++ G M ++ M + M +G+ PD+ T++ ++S + G++++A E N
Sbjct: 407 NAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVP 466
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN-VDEYNKLIQSLC 489
Y LI+G C + A +L+++M G+ P + + +I +LC
Sbjct: 467 PDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLC 516
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 147/355 (41%), Gaps = 45/355 (12%)
Query: 200 LNELIALFSKLGKGKA-------AFEVFNKFGDYGC---VANQETYYFTIEALSRRKIFD 249
LNEL++ ++ A A E+F + C TY I R + D
Sbjct: 147 LNELLSALARAPPSAACRDVPALAVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPD 206
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
V +++ TG PD +I F K G+ +AH ++ E+ + P + LI
Sbjct: 207 LGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLI 266
Query: 310 SSLCQEDETVKLALDMLDDFSGEAR-------------------KYAIKPF--------- 341
+ LC+ E K + R K +++ F
Sbjct: 267 NGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLV 326
Query: 342 ------SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+S + +LC+ + A+ + M+ +GP P + +++ Y+ AG + +
Sbjct: 327 PDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNL 386
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
+M G+ PD + + L++ YA G M+++ + + K +T+ T+I +C+
Sbjct: 387 FNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCR 446
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
L D A++ N M D GV P+ Y+ LIQ C + D A++L+ DM KG+
Sbjct: 447 LGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRR-DLVKAKELISDMLSKGI 500
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 122/307 (39%), Gaps = 3/307 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
+ +I+ F +LG+ A E FN D G + Y I+ R+ A + M+
Sbjct: 437 FSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDML 496
Query: 260 ETGSLPDSEKV-GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
G P K II+ CK G+ E V L P L+ C
Sbjct: 497 SKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGN- 555
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+K A+ +LD + I +++++ C+ + A TL M+ + + +N
Sbjct: 556 MKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNI 615
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
++ +A A EM M G+ ++TY ++ G +EA +L + +
Sbjct: 616 ILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMN 675
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
+ +T++ +IR K+ A +L + G+ P + Y +I +L +K + A
Sbjct: 676 VKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNL-IKEESFEDA 734
Query: 499 EKLLEDM 505
+ L M
Sbjct: 735 DNLFSSM 741
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 93/235 (39%), Gaps = 1/235 (0%)
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A + + M G PD ++ +CK G+ +A ++ K++ ++
Sbjct: 559 AVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILH 618
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
L Q T+ +A +M + +I +++V+ LCR A LL K+ S
Sbjct: 619 GLFQARRTI-VAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVK 677
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
FN VI A K G A E+ + + GL P + TY +++ E+A +
Sbjct: 678 FDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNL 737
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
+ +K+ + +IR E A L+++ G+ P + LI
Sbjct: 738 FSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLI 792
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 49/110 (44%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N +I K+G+ + A E+F YG V TY I L + + F+ A ++ M
Sbjct: 683 FNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSME 742
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
++ PDS + +II G+ +A + +K + P + + LI
Sbjct: 743 KSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLI 792
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 151/353 (42%), Gaps = 6/353 (1%)
Query: 161 VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVF 220
+ +L+ C + +L D + EIG + + N +I K + A + F
Sbjct: 158 IGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPD----IVAYNAIIDSLCKTRRVNDALDFF 213
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ G G N TY + L ++ A + MI+ P+ ++ F K
Sbjct: 214 KEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKN 273
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
GK EA ++ + P + LI+ LC D + A M D + +
Sbjct: 274 GKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDR-IDEANQMFDLMVSKGCFPDVVS 332
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++++I C+ K V L KM G +N++I + + GD+ A E M
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMD 392
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
S G+ PD++TY L+ G + G +E+A I + +K+ L VTY T+I+G CK + +
Sbjct: 393 SFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVE 452
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
A L + G++P++ Y ++ LC K L E L M+ +GL N
Sbjct: 453 DAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQ-HEVEALYTKMKQEGLMKN 504
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 155/347 (44%), Gaps = 21/347 (6%)
Query: 181 WDIVKEIGEKEKGVLTVE----ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYY 236
+D+V +G+K + VL + N +I F + A V K G ++ T
Sbjct: 101 YDVVISLGKKME-VLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIG 159
Query: 237 FTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREK 296
+ RR A S+ +KM+E G PD II CK + +A + K
Sbjct: 160 SLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRK 219
Query: 297 KMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLC 349
+ P L++ LC ++ +L DM+ K I P +S+++ +
Sbjct: 220 GIRPNVVTYTALVNGLCNSGRWNDAARLLRDMI--------KRKITPNVITYSALLDAFV 271
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
+ V AK + +M+ P ++S+I+ + A +M LM S+G PDV
Sbjct: 272 KNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVV 331
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
+Y L++G+ ++E+ ++ + + + VTY+TLI+G+ ++ + D A + ++M
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQM 391
Query: 470 KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
GV P++ YN L+ LC L A + EDM+ + L+ +T
Sbjct: 392 DSFGVSPDIWTYNILLGGLCDNGL-LEKALVIFEDMQKSEMDLDIVT 437
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 84/169 (49%), Gaps = 3/169 (1%)
Query: 350 RMKDV--HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
R++D+ H A L +M+ P P FN ++SA K + + K M G++ D
Sbjct: 60 RLRDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRND 119
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
+YT+ +++ + Q+ A +L + K VT +L+ G+C+ A+ L++
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+M ++G +P++ YN +I SLC K A +++ KG+ N +T
Sbjct: 180 KMVEIGYRPDIVAYNAIIDSLC-KTRRVNDALDFFKEIGRKGIRPNVVT 227
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 94/201 (46%), Gaps = 7/201 (3%)
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+I F+ ++ ++ +MK +L KM G FN VI+ + ++ A+ +L
Sbjct: 84 SIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVL 143
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
M G +PD T L++G+ ++ +A ++++ + R V Y+ +I CK
Sbjct: 144 GKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKT 203
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ AL E+ G++PNV Y L+ LC + W A +LL DM + + N IT
Sbjct: 204 RRVNDALDFFKEIGRKGIRPNVVTYTALVNGLC-NSGRWNDAARLLRDMIKRKITPNVIT 262
Query: 517 RALIRAVKELEEDAIENGEAL 537
+ L + ++NG+ L
Sbjct: 263 YS------ALLDAFVKNGKVL 277
>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
Length = 595
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 173/386 (44%), Gaps = 18/386 (4%)
Query: 156 VTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKA 215
VT G+ LL +C S + + D + G + ILN ++ K+G+ +
Sbjct: 167 VTYGI---LLNGLCKSGHVGDALKVLDRMSSPGSDV--CPDIAILNTVVDGLCKIGRLQQ 221
Query: 216 AFEVFNKFGDY--GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
A ++ + GC N TY +A R A + +M + G P+ + I
Sbjct: 222 AIIFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTI 281
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQS----VVAFLISSLCQEDETVKLALDMLDDF 329
I C+ G+ A + REK+ P++ V ++S V +A+++ +
Sbjct: 282 IGGLCRVGRVGAALEFF---REKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEM 338
Query: 330 SGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
+ + + ++I L + + A T + M G +N +I + + +
Sbjct: 339 ADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKL 398
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
A E+L+ M+ GL+PDVYTY L+SG G E+L + + S VT+ TL
Sbjct: 399 HEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTL 458
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
+ GYCK + D AL++ M + +QPN YN LI LC K+ + A KL ++MR K
Sbjct: 459 VHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLC-KSREVDVAIKLFDEMREKN 517
Query: 510 LHLNGIT-RALIRAV--KELEEDAIE 532
+ N T AL++ + K++ E A E
Sbjct: 518 VPANVTTYNALLKGLQDKKMAEKAFE 543
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 130/302 (43%), Gaps = 3/302 (0%)
Query: 189 EKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVA--NQETYYFTIEALSRRK 246
EKE V +N +I ++G+ AA E F + A N TY A
Sbjct: 267 EKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPEARGNAVTYSTLASAFLHCN 326
Query: 247 IFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVA 306
D A + +M + G PD+ +IS + G+ +A ++
Sbjct: 327 NVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYN 386
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
LI C++ + + A ++L++ G + + +++++ LC+ D LL MI
Sbjct: 387 ILIGGFCRKKK-LHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMID 445
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
+G P F +++ Y KAG A+ + + M ++P+ Y L+ +++
Sbjct: 446 DGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDV 505
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A ++ +E ++ + + TY+ L++G + + A +L++ M++ PN + L++
Sbjct: 506 AIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDVLME 565
Query: 487 SL 488
L
Sbjct: 566 WL 567
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 95/191 (49%), Gaps = 8/191 (4%)
Query: 333 ARKYAIKPFSSVIRS-LCRM--KDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
A ++ I P S+++ S L R A L + S P P ++FNS+++A +AG++
Sbjct: 88 AARHRIPPPSALLLSKLVRRFSSPAEAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNL 147
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYH 447
E+ MR +KPDV TY L++G G + +A ++L+ S + P +
Sbjct: 148 RGMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILN 207
Query: 448 TLIRGYCKLEEFDCALKLLNE-MKDV-GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
T++ G CK+ A+ ++E M+ V G PN YN L + C + D A K++ M
Sbjct: 208 TVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLADAFC-RVGDIGMACKIVARM 266
Query: 506 RLKGLHLNGIT 516
+G+ N IT
Sbjct: 267 EKEGVAPNVIT 277
>gi|242050640|ref|XP_002463064.1| hypothetical protein SORBIDRAFT_02g037020 [Sorghum bicolor]
gi|241926441|gb|EER99585.1| hypothetical protein SORBIDRAFT_02g037020 [Sorghum bicolor]
Length = 558
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 151/326 (46%), Gaps = 14/326 (4%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+ N LI ++ G+ + A + + ++ TY I A + A +C+
Sbjct: 188 TDTYNSLIHAHARAGQWRWAINIMDDMQRAAIPPSRTTYNNVINACGAAGNWKKALELCK 247
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
KM E G PD ++S F G + +A + + + K+ P + +I L
Sbjct: 248 KMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIVIHCL---- 303
Query: 317 ETVKLAL--DMLDDFSGEARKYAIKP-----FSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
VK+AL + ++ F+ + I P ++S++ S K + M++EG
Sbjct: 304 --VKVALYGEAIELFNSMRERRTICPPDVVTYTSIMYSYSVCGQAENCKAVFDMMVAEGV 361
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
P +N+++ AY+ G T A+E KL++ G KPD+ +YT L++ Y E+A E
Sbjct: 362 RPNIVSYNALLGAYASHGMHTEALETFKLLKQNGFKPDIVSYTSLLNAYGRSALPEKARE 421
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ NE +KN + + V+Y+ LI Y A+ LL+EM+ G+QP+V + L+ + C
Sbjct: 422 VFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPDVISISTLLTA-C 480
Query: 490 LKALDWRTAEKLLEDMRLKGLHLNGI 515
+ +L + +G+ LN +
Sbjct: 481 GRCRQPTKIGIILAAAKSRGIQLNTV 506
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 129/325 (39%), Gaps = 36/325 (11%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I G K A E+ K + G + T+ + A + A + E M
Sbjct: 227 NNVINACGAAGNWKKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKS 286
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF----LISSLCQED 316
+ PD+ + +I K EA ++ RE++ P VV + S+C +
Sbjct: 287 SKVAPDTCTMNIVIHCLVKVALYGEAIELFNSMRERRTICPPDVVTYTSIMYSYSVCGQA 346
Query: 317 ETVKLALDML---------------------DDFSGEA-------RKYAIKP----FSSV 344
E K DM+ EA ++ KP ++S+
Sbjct: 347 ENCKAVFDMMVAEGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGFKPDIVSYTSL 406
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
+ + R A+ + ++M P +N++I AY AG + A+ +L M G+
Sbjct: 407 LNAYGRSALPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGI 466
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
+PDV + + L++ Q + IL AK +L+ V Y++ I Y L ++ AL+
Sbjct: 467 QPDVISISTLLTACGRCRQPTKIGIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALE 526
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLC 489
L M+ V+P+ YN LI C
Sbjct: 527 LYTSMRTGNVKPDAVTYNILISGSC 551
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 6/162 (3%)
Query: 332 EARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG 387
E +++ KP ++S+I + R A ++ M PP +N+VI+A AG
Sbjct: 178 EMQEWRCKPDTDTYNSLIHAHARAGQWRWAINIMDDMQRAAIPPSRTTYNNVINACGAAG 237
Query: 388 DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYH 447
+ A+E+ K M G+ PD+ T+ ++S + NG Q +A K + T +
Sbjct: 238 NWKKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMN 297
Query: 448 TLIRGYCKLEEFDCALKLLNEMKD--VGVQPNVDEYNKLIQS 487
+I K+ + A++L N M++ P+V Y ++ S
Sbjct: 298 IVIHCLVKVALYGEAIELFNSMRERRTICPPDVVTYTSIMYS 339
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 73/166 (43%), Gaps = 1/166 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+ +IR R V A+ L +M P +NS+I A+++AG A+ ++ M+
Sbjct: 156 YGMMIRLHARHNQVDQARGLFFEMQEWRCKPDTDTYNSLIHAHARAGQWRWAINIMDDMQ 215
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+ P TY +++ G ++A E+ + +N +T++ ++ + ++
Sbjct: 216 RAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYS 275
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
A+ MK V P+ N +I L AL + A +L MR
Sbjct: 276 KAIAYFEIMKSSKVAPDTCTMNIVIHCLVKVAL-YGEAIELFNSMR 320
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 71/157 (45%), Gaps = 1/157 (0%)
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM-ISEGPPPGNAVFNSVISAYSKAGDMTP 391
A ++A + F +IR + + A + M I E N ++ +I +++ +
Sbjct: 112 AGRFARRNFPLLIREITISGSLKHAVHVFRWMKIQENYCARNDIYGMMIRLHARHNQVDQ 171
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
A + M+ KPD TY L+ +A GQ A I+++ ++ S TY+ +I
Sbjct: 172 ARGLFFEMQEWRCKPDTDTYNSLIHAHARAGQWRWAINIMDDMQRAAIPPSRTTYNNVIN 231
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ AL+L +M + GV P++ +N ++ +
Sbjct: 232 ACGAAGNWKKALELCKKMTENGVGPDLITHNIVLSAF 268
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 145/308 (47%), Gaps = 2/308 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI+ K G+ + A ++F + G + Y I+ + D A + ++M++ G
Sbjct: 297 LISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKG 356
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P +I + EA + +EK + P LI+ C+ K A
Sbjct: 357 ISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCR-CANAKKA 415
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+ D+ K K ++S++ L + + A L K+ SEG P +FN++I
Sbjct: 416 FLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDG 475
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ ++ A E+LK M + PD T+ +M G+ G++EEA E+ +E K+ +
Sbjct: 476 HCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPD 535
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
++++TLI GY + + A ++ NEM D G P V YN L+Q LC K + AE+LL
Sbjct: 536 HISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLC-KNQEGDLAEELL 594
Query: 503 EDMRLKGL 510
++M KG+
Sbjct: 595 KEMVSKGM 602
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 151/326 (46%), Gaps = 5/326 (1%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L+ +C +E +++ + + G + V I N LI F G A ++
Sbjct: 296 SLISGMCKQGRLEEASKIFEEMVQKGLRPSAV----IYNTLIDGFCNKGNLDMASAYKDE 351
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G TY I AL + D A + +++ E G PD+ +I+ +C+
Sbjct: 352 MLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCAN 411
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
AK+A +++ + P + L+ L +++ +K A D+ + E F+
Sbjct: 412 AKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNR-MKEADDLFKKITSEGVLPDAIMFN 470
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
++I C +V GA LL M PP FN+++ + + G + A E+ M+ R
Sbjct: 471 ALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRR 530
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G+KPD ++ L+SGY+ G +++A + NE + +TY+ L++G CK +E D A
Sbjct: 531 GIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLA 590
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSL 488
+LL EM G+ P+ Y LI+ +
Sbjct: 591 EELLKEMVSKGMTPDDTTYFTLIEGI 616
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 123/250 (49%), Gaps = 6/250 (2%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
+I C +A EA + +EK + P L+S + + T + A + +
Sbjct: 157 LIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRT-EAAWVLYAEMFRL 215
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
K ++ F+ +I LC+ + AK + M + G P +N+++ Y +G + A
Sbjct: 216 RIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAA 275
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
+L M+ + ++PD +TY L+SG G++EEA +I E + R S V Y+TLI G
Sbjct: 276 DAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDG 335
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT--AEKLLEDMRLKGL 510
+C D A +EM G+ P + YN LI +L ++ RT AE ++++++ KG+
Sbjct: 336 FCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHAL---FMEQRTDEAECMIKEIQEKGI 392
Query: 511 HLNGITRALI 520
+ IT ++
Sbjct: 393 SPDAITYNIL 402
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 140/338 (41%), Gaps = 42/338 (12%)
Query: 155 WVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVL-TVEILNELIALFSKLGKG 213
+ +S V D L+K+ C E + + +KE KGVL T+E N L++LF KL +
Sbjct: 148 FKSSIVFDYLIKSCCDMNRADEAFECFYTMKE-----KGVLPTIETCNSLLSLFLKLNRT 202
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
+AA+ ++ + ++ T+ I L + A M +G P+ I
Sbjct: 203 EAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTI 262
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEA 333
+ +C G+ + A + T + +K+ P D F+
Sbjct: 263 VHGYCSSGRVEAADAILTTMKRQKIEP--------------------------DSFT--- 293
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
+ S+I +C+ + A + +M+ +G P ++N++I + G++ A
Sbjct: 294 -------YGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMAS 346
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
M +G+ P + TY L+ + +EA ++ E ++ +TY+ LI GY
Sbjct: 347 AYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGY 406
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
C+ A L +EM G++P Y L+ L K
Sbjct: 407 CRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKK 444
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 122/268 (45%), Gaps = 14/268 (5%)
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF- 307
D A+ M E G LP E ++S F K + + A V+Y A ++ SV F
Sbjct: 168 DEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY--AEMFRLRIKSSVYTFN 225
Query: 308 -LISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLS 362
+I+ LC+E + L DF G +KP +++++ C V A +L+
Sbjct: 226 IMINVLCKEGK-----LKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILT 280
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG 422
M + P + + S+IS K G + A ++ + M +GL+P Y L+ G+ N G
Sbjct: 281 TMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKG 340
Query: 423 QMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
++ A +E K + TY++LI + D A ++ E+++ G+ P+ YN
Sbjct: 341 NLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYN 400
Query: 483 KLIQSLCLKALDWRTAEKLLEDMRLKGL 510
LI C + + + A L ++M G+
Sbjct: 401 ILINGYC-RCANAKKAFLLHDEMLASGI 427
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 110/276 (39%), Gaps = 41/276 (14%)
Query: 183 IVKEIGEKEKGVLTVEIL-NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEA 241
++KEI +EKG+ I N LI + + K AF + ++ G ++TY +
Sbjct: 383 MIKEI--QEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHV 440
Query: 242 LSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA-HVVYTLAREKKMYP 300
LS++ A + +K+ G LPD+ +I C K A ++ + R K P
Sbjct: 441 LSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMK--VP 498
Query: 301 PQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTL 360
P V F+++++ CR V A+ L
Sbjct: 499 PDEVT-----------------------------------FNTIMQGHCREGKVEEAREL 523
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
+M G P + FN++IS YS+ GD+ A + M G P V TY L+ G
Sbjct: 524 FDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCK 583
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
+ + A E+L E TY TLI G K+
Sbjct: 584 NQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKV 619
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 159/355 (44%), Gaps = 37/355 (10%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V N LI + + + A + + G YG +++T+ ++ + A + E
Sbjct: 211 VTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIRE 270
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M+ G + V ++ +CK G+ +E + P + L++ LC+
Sbjct: 271 QMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIG 330
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI----------- 365
VK AL++LD E I ++S+I LC++ +V A +L++MI
Sbjct: 331 H-VKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTY 389
Query: 366 ------------------------SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
S+G P FNS+I + AME+ + M++
Sbjct: 390 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKT 449
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
+G PD +TY L+ + G++EEA +L E + + + VTY+TLI G+CK + +
Sbjct: 450 KGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEE 509
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A ++ +EM+ G+ NV YN LI LC K A +L++ M ++GL + T
Sbjct: 510 AEEIFDEMELQGISRNVVTYNTLIDGLC-KNRRVEEAAQLMDQMLMEGLKPDKFT 563
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 171/378 (45%), Gaps = 38/378 (10%)
Query: 179 ALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFT 238
++ D++ ++ V + I E++ K G + V + GC + T+
Sbjct: 87 SILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLIL 146
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLP-DSEKVGKIISWFCKGGKAKEAHVVYTLAREKK 297
IE+ ++ ++FD A +V + M E L D+ +++ G K K +V + +
Sbjct: 147 IESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRG 206
Query: 298 MYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGA 357
+ P + LI +LC+ + ++ A+ M+++ K F+++++ +++GA
Sbjct: 207 IKPDVTTFNILIKALCRAHQ-IRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGA 265
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
+ +M++ G P N N ++ Y K G + + + M + G +PD +T+ L++G
Sbjct: 266 LRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNG 325
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM--KDV--- 472
G ++ A EIL+ + TY++LI G CKL E + A+++LN+M +D
Sbjct: 326 LCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPN 385
Query: 473 ------------------------------GVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
G+ P+V +N LIQ LCL + R A +L
Sbjct: 386 TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTN-NHRLAMELF 444
Query: 503 EDMRLKGLHLNGITRALI 520
E+M+ KG H + T ++
Sbjct: 445 EEMKTKGCHPDEFTYNML 462
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 151/317 (47%), Gaps = 2/317 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
+N L+ + K G+ + ++ + G ++ T+ + L R A + + M+
Sbjct: 284 VNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVML 343
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G PD +I CK G+ +EA + + P LIS+LC+E++ V
Sbjct: 344 QEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQ-V 402
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
+ A ++ + + + F+S+I+ LC + A L +M ++G P +N +
Sbjct: 403 EEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNML 462
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I + G + A+ +LK M S G +V TY L+ G+ ++EEA EI +E +
Sbjct: 463 IDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGI 522
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
+ VTY+TLI G CK + A +L+++M G++P+ YN L+ C +A D + A
Sbjct: 523 SRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFC-RAGDIKKAA 581
Query: 500 KLLEDMRLKGLHLNGIT 516
+++ M G + +T
Sbjct: 582 DIVQTMTSNGCEPDSVT 598
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 160/383 (41%), Gaps = 38/383 (9%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
++L+ +C K + D++ + G + + T N LI KLG+ + A E+ N
Sbjct: 320 NSLVNGLCRIGHVKHALEILDVMLQEG-FDPDIFTY---NSLIFGLCKLGEVEEAVEILN 375
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ N TY I L + + A + + G LPD +I C
Sbjct: 376 QMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTN 435
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ--------------------------- 314
+ A ++ + K +P + LI SLC
Sbjct: 436 NHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYN 495
Query: 315 -------EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
+++ ++ A ++ D+ + + ++++I LC+ + V A L+ +M+ E
Sbjct: 496 TLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLME 555
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P +NS+++ + +AGD+ A ++++ M S G +PD TY L+ G + G++E A
Sbjct: 556 GLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELA 615
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
+L + L+P TY+ +I+ + + A++L EM + G P+ Y + +
Sbjct: 616 SRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRG 675
Query: 488 LCLKALDWRTAEKLLEDMRLKGL 510
LC A L +M KG
Sbjct: 676 LCSGGGPIGEAVDFLVEMTDKGF 698
>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
Length = 761
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 125/255 (49%), Gaps = 1/255 (0%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
TY ++ + + ++ + M+ G PD +I + K GK EA +V++
Sbjct: 308 TYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKM 367
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
R++ + P +I LC+ V+ A+ + E ++S+I LC
Sbjct: 368 RQQGLNPDAVTYGAVIGILCKSGR-VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 426
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
A+ L+ +M+ G FNS+I ++ K G + + ++ LM G+KPD+ TY+
Sbjct: 427 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 486
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
L+ GY G+M+EA ++L+ + + VTY TLI GYCK+ AL L EM+ G
Sbjct: 487 LIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSG 546
Query: 474 VQPNVDEYNKLIQSL 488
V P++ YN ++Q L
Sbjct: 547 VSPDIITYNIILQGL 561
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 170/390 (43%), Gaps = 36/390 (9%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKG---KAAFEV 219
+++ CSS KE V+ G + G L IA + L +G K A
Sbjct: 271 SIMHGYCSSGQPKEAIGFLKKVRSDGVEPDG------LEPDIATYCTLLQGYATKGALVG 324
Query: 220 FNKFGDY----GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
+ D G + Y I A +++ D A V KM + G PD+ G +I
Sbjct: 325 MHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIG 384
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC---QEDETVKLALDMLDDFSGE 332
CK G+ ++A + + ++ + P V LI LC + + +L L+MLD
Sbjct: 385 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLD----- 439
Query: 333 ARKYAIKP--FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
R + F+S+I S C+ V ++ L M+ G P ++++I Y AG M
Sbjct: 440 -RGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMD 498
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
AM++L M S GLKP+ TY L++GY +M +A + E + + +TY+ ++
Sbjct: 499 EAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIIL 558
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD---WRTAEKL-LEDMR 506
+G + A +L + + G Q + YN ++ LC L R + L L D++
Sbjct: 559 QGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLK 618
Query: 507 LKGLHLNGITRALIRAVKELEEDAIENGEA 536
L+ N + AL++ + NGEA
Sbjct: 619 LEARTFNIMIDALLKVGR--------NGEA 640
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 160/401 (39%), Gaps = 51/401 (12%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
LLK +C +E L ++ + G V +I F K G A+ +++
Sbjct: 164 LLKGLCDENRSQEALELPHMMAD-GRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEM 222
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
D + TY I AL + + D A V M++ G +P+ I+ +C G+
Sbjct: 223 LDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQP 282
Query: 284 KEA----------------------------------------HVVYTLAREKKMYPPQS 303
KEA H + L ++P
Sbjct: 283 KEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHY 342
Query: 304 VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKT 359
V LI + ++ + + L FS + R+ + P + +VI LC+ V A
Sbjct: 343 VYNILICAYAKQGKVDEAMLV----FS-KMRQQGLNPDAVTYGAVIGILCKSGRVEDAML 397
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
+MI EG PGN V+NS+I A E++ M RG+ + + ++ +
Sbjct: 398 YFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHC 457
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
G++ E+ ++ + + + +TY TLI GYC + D A+KLL+ M VG++PN
Sbjct: 458 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTV 517
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
Y LI C K A L ++M G+ + IT +I
Sbjct: 518 TYRTLINGYC-KISRMGDALVLFKEMESSGVSPDIITYNII 557
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 131/316 (41%), Gaps = 18/316 (5%)
Query: 215 AAFEVFNKFGDYGC---VANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVG 271
AA +N+ G TY I R D ++ +++ G ++
Sbjct: 67 AAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFT 126
Query: 272 KIISWFCKGGKAKEA-HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALD---MLD 327
++ C + +A +V E P L+ LC E+ + + AL+ M+
Sbjct: 127 PLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQE-ALELPHMMA 185
Query: 328 DFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG 387
D G + +++VI + D A + +M+ P ++S+I+A K
Sbjct: 186 DGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQ 245
Query: 388 DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR---LSP- 443
M AME+L M G+ P+ TYT +M GY + GQ +EA L + + + L P
Sbjct: 246 AMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPD 305
Query: 444 -VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
TY TL++GY LL+ M G+ P+ YN LI C A + E +L
Sbjct: 306 IATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILI---CAYAKQGKVDEAML 362
Query: 503 --EDMRLKGLHLNGIT 516
MR +GL+ + +T
Sbjct: 363 VFSKMRQQGLNPDAVT 378
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 46/237 (19%), Positives = 90/237 (37%), Gaps = 2/237 (0%)
Query: 191 EKGV-LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
++G+ L N +I K G+ + ++F+ G + TY I+ D
Sbjct: 439 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMD 498
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A + M+ G P++ +I+ +CK + +A V++ + P ++
Sbjct: 499 EAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIIL 558
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
L Q T A ++ + + + ++ ++ LC+ K A + +
Sbjct: 559 QGLFQTRRTAA-AKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDL 617
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
FN +I A K G A ++ S GL P+ +TY + G +EE
Sbjct: 618 KLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEE 674
>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 151/331 (45%), Gaps = 10/331 (3%)
Query: 186 EIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRR 245
++G ++ GV + N L+ + A V++ G N TY I AL +
Sbjct: 114 DLGCRDPGV---RVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQN 170
Query: 246 KIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVV 305
D A + ++M G PD G I+S CK G+ +EA + P Q+
Sbjct: 171 DRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLA-----ETVPVQASY 225
Query: 306 AFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI 365
++ +LC E ++ ++++ + + +++++ + C+ +++ A +L++M+
Sbjct: 226 NAVVHALCGEFRMWEV-FSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMV 284
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
S G P F +++ + + G + A+ M M G P +Y L+ G G ++
Sbjct: 285 SMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLK 344
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
A + N K+N + TY TL+ G+ + D A+ + NEMK G +PNV Y +I
Sbjct: 345 GALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMI 404
Query: 486 QSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
LC K + + AE L++ M + N +T
Sbjct: 405 DVLCKKMM-FDQAESLIDKMLMDNCPPNTVT 434
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 148/335 (44%), Gaps = 19/335 (5%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEK--EKGVLTVEILNELIALFSKLGKGKAAFEV 219
+A++ A+C G+ ++ ++ +V E+ ++ + V+T ++ F K + + A +
Sbjct: 226 NAVVHALC---GEFRMWEVFSVVNEMVQRGLQPNVVT---YTTIVDAFCKARELRMACAI 279
Query: 220 FNKFGDYGCVANQETYYFTIEAL-SRRKIFD----WAWSVCEKMIETGSLPDSEKVGKII 274
+ GC N T+ ++ K+ D W W M++ G P + +I
Sbjct: 280 LARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHW-----MVDEGWAPSTISYNVLI 334
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR 334
C G K A + + + P + + L+ + + A+ + ++
Sbjct: 335 RGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGD-LDGAMLIWNEMKSSGC 393
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
K + ++++I LC+ A++L+ KM+ + PP FN++I G + A+
Sbjct: 394 KPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALN 453
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+ MR G P+ TY L+ G G ++A ++ E N LS VTY+T+I C
Sbjct: 454 VFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLC 513
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
++ A+ LL M G+QP+ +N +I + C
Sbjct: 514 QMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYC 548
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 115/286 (40%), Gaps = 36/286 (12%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
L+ FS G A ++N+ GC N Y I+ L ++ +FD A S+ +KM+
Sbjct: 368 LVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDN 427
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P++ +I C G+ A V+ R +P D T
Sbjct: 428 CPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHP--------------NDRT---- 469
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++ ++ L R + A ++ +M++ G +N+VI+
Sbjct: 470 ------------------YNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINC 511
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ AM +L M +G++PD +T+ ++ Y G++ A +L + + +
Sbjct: 512 LCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRN 571
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
V Y LI C + A+ L +M G+ PN +N L++++
Sbjct: 572 VVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAI 617
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 67/158 (42%), Gaps = 8/158 (5%)
Query: 369 PPPGNA----VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
P PG+ + + + AGD+ L+ MR RG+ + +A G
Sbjct: 43 PDPGSGDSARHHEATVRRLAAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSA 102
Query: 425 EEACEILNEAKKNHSRLSPV-TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
+ A + A R V Y+ L+ + + + + M+ GV PNV YN
Sbjct: 103 DRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNL 162
Query: 484 LIQSLCLK-ALDWRTAEKLLEDMRLKGLHLNGITRALI 520
LI++LC +D A K+L++M KG H + ++ I
Sbjct: 163 LIRALCQNDRVD--AARKMLDEMSRKGCHPDEVSHGTI 198
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 140/327 (42%), Gaps = 5/327 (1%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L+ C + Y +++++ G + V I++ L + G+ +F K
Sbjct: 254 SLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGL----CEAGRIDEGISLFKK 309
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ C TY I AL + +M E P+ ++ CK K
Sbjct: 310 MREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERK 369
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
E+ + EK + P LI C+E ++ AL++L + + ++
Sbjct: 370 LDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGR-IEAALEILGLMESNNCRPNERTYN 428
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+I + K VH A TLLSKM+ P +NS+I KAG A ++L L++
Sbjct: 429 ELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKEN 488
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
GL PD +TY+ + +MEEAC++ N K+ + + V Y LI G+CK + D A
Sbjct: 489 GLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEA 548
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ LL M PN YN LI +C
Sbjct: 549 ISLLERMHSEDCLPNSSTYNSLIYGVC 575
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 176/393 (44%), Gaps = 47/393 (11%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGV---LTVEILNELIALFSKLGKGKAAFEV 219
+++KA C SV ++ L D ++++ + + L+V NEL+ + ++ V
Sbjct: 145 SMIKA-CVSV--DDIRFLLDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRV 201
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
+ + + V N T + A S+ A K+ + G PDS +I +C+
Sbjct: 202 YTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCR 261
Query: 280 GGKAKEAHVVYTL-----------------------------------AREKKMYPPQSV 304
A+ V+ + RE YP
Sbjct: 262 NNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRT 321
Query: 305 VAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM 364
+I +L D ++ +D+ ++ + + + ++ ++ ++C+ + + ++ +L++M
Sbjct: 322 YTVIIHALFGNDRNLE-GMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEM 380
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
+ +G P +N++I Y + G + A+E+L LM S +P+ TY L+ G++ +
Sbjct: 381 MEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHV 440
Query: 425 EEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
+A +L +K S+L+P VTY++LI CK FD A KLL+ +K+ G+ P+ Y+
Sbjct: 441 HKAMTLL--SKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYS 498
Query: 483 KLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
I +LC K+ A L ++ KG+ N +
Sbjct: 499 VFIDTLC-KSKRMEEACDLFNSLKEKGIKANEV 530
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 147/336 (43%), Gaps = 38/336 (11%)
Query: 191 EKGVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
EKG++ +V N LI + + G+ +AA E+ C N+ TY I S+RK
Sbjct: 382 EKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVH 441
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A ++ KM+E+ P +I CK G A+ + L +E + P Q + I
Sbjct: 442 KAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFI 501
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
+LC+ + ++ A D+ + + K ++++I C+ + A +LL +M SE
Sbjct: 502 DTLCKS-KRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDC 560
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
P ++ +NS+I K G + + M++ M G+KP V TYT L+ E
Sbjct: 561 LPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIE------------E 608
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+L E +FD A ++ N+M G +P+V Y I + C
Sbjct: 609 MLREG-----------------------DFDHANRVFNQMVSFGHKPDVYTYTAFIHTYC 645
Query: 490 LKALDWRTAEKLLEDMRLKGLHLNGITRALIRAVKE 525
+ + AE ++ M G+ + +T L+ + E
Sbjct: 646 TSG-NVKEAEGMMARMIEAGVMPDSLTYTLLISAYE 680
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 118/264 (44%), Gaps = 2/264 (0%)
Query: 168 ICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYG 227
IC +K V+ ++ ++ E K ++ N LI + K G +A+++ + + G
Sbjct: 431 ICGFSKRKHVHKAMTLLSKMLE-SKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENG 489
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH 287
V +Q TY I+ L + K + A + + E G + +I CK GK EA
Sbjct: 490 LVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAI 549
Query: 288 VVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRS 347
+ + P S LI +C+E + V+ L M+++ S K + ++ +I
Sbjct: 550 SLLERMHSEDCLPNSSTYNSLIYGVCKEGK-VQEGLSMVENMSKMGVKPTVATYTILIEE 608
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
+ R D A + ++M+S G P + + I Y +G++ A M+ M G+ PD
Sbjct: 609 MLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPD 668
Query: 408 VYTYTGLMSGYANGGQMEEACEIL 431
TYT L+S Y G +A +L
Sbjct: 669 SLTYTLLISAYERLGLAYDAFNVL 692
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 114/260 (43%), Gaps = 43/260 (16%)
Query: 313 CQEDETVKLALDMLDDFSGEAR----KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
C + ++ LD L + + K +++ ++ ++ L R + K + ++M+++
Sbjct: 150 CVSVDDIRFLLDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDM 209
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P N++++AYSK G++ A + + GL PD +TYT L+ GY + A
Sbjct: 210 IVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAY 269
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYC-------------KLEEFDC-------------- 461
++ N R + V+Y T+I G C K+ E DC
Sbjct: 270 KVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHAL 329
Query: 462 --------ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
+ L NEM++ +PNV Y ++ ++C K + ++L +M KGL +
Sbjct: 330 FGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMC-KERKLDESRRILNEMMEKGLVPS 388
Query: 514 GIT-RALIRAVKELEEDAIE 532
+T ALIR EE IE
Sbjct: 389 VVTYNALIRGY--CEEGRIE 406
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 109/259 (42%), Gaps = 15/259 (5%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIG-EKEKGVLTVEILNELIALFSKLGKGKAAFEVF 220
++L+ C + Y L D++KE G ++ +V I K + + A ++F
Sbjct: 463 NSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSV-----FIDTLCKSKRMEEACDLF 517
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
N + G AN+ Y I+ + D A S+ E+M LP+S +I CK
Sbjct: 518 NSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKE 577
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
GK +E + + + P + LI + +E + D + + + KP
Sbjct: 578 GKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGD-----FDHANRVFNQMVSFGHKP 632
Query: 341 ----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+++ I + C +V A+ ++++MI G P + + +ISAY + G A +L
Sbjct: 633 DVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVL 692
Query: 397 KLMRSRGLKPDVYTYTGLM 415
K M G P + L+
Sbjct: 693 KRMLDAGCDPSHPIWNNLI 711
>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
Length = 719
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 174/364 (47%), Gaps = 14/364 (3%)
Query: 158 SGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAF 217
S ++ +K +C +E ++ +KE G + +++ N +++ K GK + F
Sbjct: 156 SASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIR----ISIVACNSILSGCLKAGKTELLF 211
Query: 218 EVFNKFGDYGCV--ANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
E + + G AN ET I+A + + + ++TG P + K+I+
Sbjct: 212 EFYQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIA 271
Query: 276 WFCKGGK-AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR 334
FC+ A + V++T+ + P +I+ LC+ +E ++ A + +D + R
Sbjct: 272 GFCQAKNYASMSEVLHTMIARNHL-PTIYTYQEIINGLCKNEECLE-AYRVFNDL--KDR 327
Query: 335 KYAIKP--FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
YA ++++I LC M A+ L +M+ +G P +N+++ K+GD A
Sbjct: 328 GYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERA 387
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
E+ M ++G T ++S + G+ +EA E+ + + + +TY++LIRG
Sbjct: 388 CELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRG 447
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
+CK + D + LLNE+ QP+V Y LI C K D+ A++LL DM KGLH
Sbjct: 448 FCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSC-KDGDFEAAKRLLGDMSSKGLHP 506
Query: 513 NGIT 516
N T
Sbjct: 507 NAYT 510
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 160/352 (45%), Gaps = 8/352 (2%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
++ +C + E Y +++ +K+ G V+ +++ L + S K FE+ +K
Sbjct: 304 IINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDK- 362
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
G N TY + + F+ A + +M G + KIIS C GK+
Sbjct: 363 ---GMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKS 419
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
EA V+ E + LI C+E + V +++L++ + + ++ +
Sbjct: 420 DEAFEVFKKMSETGIQADAITYNSLIRGFCKEGK-VDERMNLLNELVAQDPQPSVSLYEL 478
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
+I C+ D AK LL M S+G P +++++ K+GD E+ ++G
Sbjct: 479 LIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKG 538
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
T ++S + G+ +EA E+ + + + +TY++LIRG+CK + ++
Sbjct: 539 YGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSM 598
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL--HLN 513
LLNE+ G+QP+ Y LI LC D +A++L DM KG+ H N
Sbjct: 599 NLLNELVAQGLQPSASSYASLIIQLCQNG-DAESAKRLWGDMVSKGIEPHAN 649
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 119/258 (46%), Gaps = 6/258 (2%)
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF-LISSLCQEDETVK 320
G +PDS + + + C G +EA VY +E + S+VA I S C + +
Sbjct: 151 GFIPDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRI--SIVACNSILSGCLKAGKTE 208
Query: 321 LALDMLDDF--SGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
L + + +G A + +I++ C V LL++ + G PGN +N
Sbjct: 209 LLFEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNK 268
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I+ + +A + E+L M +R P +YTY +++G + EA + N+ K
Sbjct: 269 LIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRG 328
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
V Y T+I G C++ F A KL EM D G+QPN YN ++ LK+ D+ A
Sbjct: 329 YAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHG-SLKSGDFERA 387
Query: 499 EKLLEDMRLKGLHLNGIT 516
+L +M KG +T
Sbjct: 388 CELYNEMCNKGYGTTTVT 405
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 126/294 (42%), Gaps = 1/294 (0%)
Query: 209 KLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSE 268
K G + A E++N+ + G T I L R D A+ V +KM ETG D+
Sbjct: 380 KSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAI 439
Query: 269 KVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDD 328
+I FCK GK E + + P S+ LI C+ D + A +L D
Sbjct: 440 TYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCK-DGDFEAAKRLLGD 498
Query: 329 FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD 388
S + + +++ + D + L ++ ++G A N +IS G
Sbjct: 499 MSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGK 558
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHT 448
A EM K M G+K D TY L+ G+ G++ ++ +LNE + S +Y +
Sbjct: 559 SDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYAS 618
Query: 449 LIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
LI C+ + + A +L +M G++P+ + LI LC + ++L+
Sbjct: 619 LIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGMDRLM 672
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 108/285 (37%), Gaps = 37/285 (12%)
Query: 182 DIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEA 241
++ E+ K G TV N++I+ GK AFEVF K + G A+ TY I
Sbjct: 389 ELYNEMCNKGYGTTTV-TCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRG 447
Query: 242 LSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP- 300
+ D ++ +++ P +I CK G + A + K ++P
Sbjct: 448 FCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPN 507
Query: 301 ----------------------------------PQSVVAFLISSLCQEDETVKLALDML 326
+ +IS LC ++ + A +M
Sbjct: 508 AYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDE-ASEMF 566
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
S K ++S+IR C+ V + LL++++++G P + + S+I +
Sbjct: 567 KKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQN 626
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
GD A + M S+G++P L+SG G+ E + L
Sbjct: 627 GDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGMDRL 671
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 137/306 (44%), Gaps = 2/306 (0%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ A ++ + + G TY I +L D A ++ M + G P +
Sbjct: 281 GRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTY 340
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
IIS + GK + A +Y ++ + P LI+ LC E +AL + D
Sbjct: 341 TAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGR-FGIALKIFDWME 399
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
G + ++ +I+ L M D+ A + +KM+ +GP P +N++I K G +
Sbjct: 400 GHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLN 459
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A L +M+ +PD TY L+SG+ GG+++ A E K + TY +I
Sbjct: 460 NATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMI 519
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
GYCK + D AL L M++ G +++ YN +I L K + AEK M +GL
Sbjct: 520 DGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLS-KGNRFSEAEKFCAKMTEQGL 578
Query: 511 HLNGIT 516
N IT
Sbjct: 579 QPNTIT 584
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 129/290 (44%), Gaps = 1/290 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N +I + K GK + A VFNK + + TY I R + D A+ V ++M+
Sbjct: 200 FNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMV 259
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G P+S +I+ C G+ EA + EK + P ISSLC V
Sbjct: 260 KDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGR-V 318
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
A++++ + +++ ++++I L R + A + KM+ EG P +N++
Sbjct: 319 DDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNAL 378
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I+ G A+++ M G + TY ++ G +E+A + N+ K+
Sbjct: 379 INELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGP 438
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ VTY+TLI K + A + L MK+ +P+ Y +LI C
Sbjct: 439 SPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFC 488
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 123/286 (43%), Gaps = 5/286 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I + K GK A +F + + GC A+ ETY I LS+ F A C KM E G
Sbjct: 518 MIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQG 577
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P++ +I+ CK A ++ +K P LI LCQE +
Sbjct: 578 LQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGK----- 632
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+D + + + I +S+++ LCR + A L+ M +G P ++ S++ A
Sbjct: 633 VDAAERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVA 692
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ K+ + A+E+ LM +G +P ++ Y L+ + EEA I K
Sbjct: 693 HCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSD 752
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ + L+ G + + D +K L M+ P++ Y L + L
Sbjct: 753 LIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILAREL 798
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 132/323 (40%), Gaps = 32/323 (9%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
+ N++I + + A VFNK G TY I +R + A
Sbjct: 408 QTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYM 467
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M E+ PD ++IS FCKGGK A + + + P Q +I C+E +
Sbjct: 468 MKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGK 527
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
+ +AL + + +I+ ++++I L + A+ +KM +G P +
Sbjct: 528 -IDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYT 586
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM-------EEACE- 429
S+I+ K A ++ M + P+ +TYT L+ G G++ E CE
Sbjct: 587 SLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTENGCEP 646
Query: 430 -----------ILNEAKKNHSR----------LSPV--TYHTLIRGYCKLEEFDCALKLL 466
+ E + N + LSP Y +L+ +CK + DCAL++
Sbjct: 647 TIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIF 706
Query: 467 NEMKDVGVQPNVDEYNKLIQSLC 489
N M G QP++ Y LI +LC
Sbjct: 707 NLMAVKGFQPHLFIYKVLICALC 729
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 145/329 (44%), Gaps = 15/329 (4%)
Query: 182 DIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEA 241
++V+ +G+K +V+ +I+ + GK + A +++K G V N TY I
Sbjct: 323 NLVRSMGKKGCSP-SVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINE 381
Query: 242 LSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPP 301
L F A + + M G+L +++ +II ++A VV+ + K P
Sbjct: 382 LCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFN--KMLKDGPS 439
Query: 302 QSVVAFLISSLCQED------ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVH 355
+VV + ++L E+ L M+ + + E + + + +I C+ +
Sbjct: 440 PTVVTY--NTLIVENLKRGYLNNATRFLYMMKESNCEPDE---RTYCELISGFCKGGKLD 494
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
A + +M+ G P + ++I Y K G + A+ + + M G + TY ++
Sbjct: 495 SATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAII 554
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
SG + G + EA + + + + + +TY +LI G CK + A K+ +EM+
Sbjct: 555 SGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCL 614
Query: 476 PNVDEYNKLIQSLCLKALDWRTAEKLLED 504
PN Y LI LC + AE+L E+
Sbjct: 615 PNAHTYTSLIYGLCQEG-KVDAAERLTEN 642
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 129/292 (44%), Gaps = 50/292 (17%)
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A +V ++ +G P +I+ CK GK +EA +V+ + + P
Sbjct: 181 AQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCP---------- 230
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
D F+ ++S+I CR + + A + +M+ +G
Sbjct: 231 ----------------DAFT----------YTSLILGHCRNRKLDKAFEVFDRMVKDGCN 264
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P + ++++I+ G + AM+ML+ M +G++P VYTYT +S + G++++A +
Sbjct: 265 PNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINL 324
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC- 489
+ K S TY +I G + + + A+ + ++M G+ PN YN LI LC
Sbjct: 325 VRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCT 384
Query: 490 -------LKALDWRTAEKLLEDMR-----LKGLH-LNGITRALIRAVKELEE 528
LK DW L + + +KGL ++ I +A++ K L++
Sbjct: 385 EGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKD 436
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 98/201 (48%), Gaps = 4/201 (1%)
Query: 292 LAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK---YAIKPFSSVIRSL 348
L ++K + P V +I + C+ ++ +K D L S + + F++++ L
Sbjct: 114 LVKDKILAPADHVRILMIKA-CRNEDELKRVTDFLHGISSSDSGLFGFTLYSFNTLLLQL 172
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
+ V A+ + +++ S G P FN++I+ K G + A+ + + L PD
Sbjct: 173 GKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDA 232
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNE 468
+TYT L+ G+ ++++A E+ + K+ + VTY TLI G C A+ +L E
Sbjct: 233 FTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEE 292
Query: 469 MKDVGVQPNVDEYNKLIQSLC 489
M + G++P V Y I SLC
Sbjct: 293 MTEKGIEPTVYTYTVPISSLC 313
>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 603
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 159/341 (46%), Gaps = 4/341 (1%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
E++ ++ FS++G+ K A E+ + + G V N T + I+ S + ++A + E+
Sbjct: 136 EVMRCMVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEE 195
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M G PDS ++ +CK G EA ++ E+ + +IS +
Sbjct: 196 MCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGY 255
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
T + AL + + F+ +I LC+ + A +L +M+ +G P
Sbjct: 256 TTR-ALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHT 314
Query: 378 SVISAYSKAGDMTPAMEM-LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
S+I K G A + LKL+RS KP+V TYT ++SGY ++ A +L+ K+
Sbjct: 315 SLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKE 374
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ TY TLI G+CK F+ A L+N M G PN+ YN ++ LC + +
Sbjct: 375 QGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRG-RVQ 433
Query: 497 TAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIENGEAL 537
A K+LED GL + T ++ + + +++ I AL
Sbjct: 434 EAYKMLEDGFQNGLKPDKFTYNILMS-EHCKQENIRQALAL 473
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 134/287 (46%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
++ ++ K+G A + + + G V + T+ I S + A ++++ G
Sbjct: 211 MVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMG 270
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P+ +I CK G K+A + K P LI LC++ T K
Sbjct: 271 LEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAF 330
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
L E K + ++++I CR ++ A+ LLS+M +G P + ++I
Sbjct: 331 RLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDG 390
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ KAG+ A +++ LM S G P++ TY +++G G+++EA ++L + +N +
Sbjct: 391 HCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPD 450
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
TY+ L+ +CK E AL L N+M +G+QP++ Y LI C
Sbjct: 451 KFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFC 497
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 143/316 (45%), Gaps = 3/316 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET- 261
+I K G K AFE+ + G N T+ I+ L ++ + A+ + K++ +
Sbjct: 281 MIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSE 340
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
P+ +IS +C+ K A ++ + +E+ + P + LI C+ +
Sbjct: 341 NHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAG-NFER 399
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A D+++ S E + +++++ LC+ V A +L G P +N ++S
Sbjct: 400 AYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMS 459
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
+ K ++ A+ + M G++PD+++YT L++ + +M+E+ EA +
Sbjct: 460 EHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIP 519
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+ TY ++I GYC+ A+K + + D G P+ Y +I LC K A L
Sbjct: 520 TNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLC-KQSKRDEARSL 578
Query: 502 LEDMRLKGLHLNGITR 517
+ M KGL +TR
Sbjct: 579 YDSMIEKGLVPCEVTR 594
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 3/221 (1%)
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+K A++M+ + + + + +I+ M V A+ L +M G P + +
Sbjct: 151 LKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRV 210
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
++ Y K G++ A + L +M RG D T+T ++S ++ G A
Sbjct: 211 MVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMG 270
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
+ + + +I G CK A ++L EM G +PNV + LI LC K +
Sbjct: 271 LEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAF 330
Query: 499 EKLLEDMRLKGLHLNGIT-RALIRAVKELEEDAIENGEALV 538
L+ +R + N +T A+I ED + E L+
Sbjct: 331 RLFLKLVRSENHKPNVLTYTAMISGY--CREDKLNRAEMLL 369
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 71/171 (41%), Gaps = 1/171 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N ++ K G+ + A+++ G ++ TY + +++ A ++ KM++
Sbjct: 420 NAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLK 479
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD +I+ FC+ + KE+ + + A + P +I C+E +
Sbjct: 480 IGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREG-NLT 538
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
LA+ S + ++I LC+ A++L MI +G P
Sbjct: 539 LAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVP 589
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 4/153 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ C ++ AL++ + +IG + + LIA+F + + K + F
Sbjct: 455 NILMSEHCKQENIRQALALFNKMLKIGIQPD----IHSYTTLIAVFCRENRMKESEMFFE 510
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ G + +TY I R A ++ + G PDS G IIS CK
Sbjct: 511 EAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQS 570
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
K EA +Y EK + P + L C+
Sbjct: 571 KRDEARSLYDSMIEKGLVPCEVTRITLAYEYCK 603
>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
Length = 1315
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 164/356 (46%), Gaps = 44/356 (12%)
Query: 194 VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRR-KIFDWAW 252
VLT ++N +I + +++ + A VF++ G + TY + I R + +
Sbjct: 793 VLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADR 852
Query: 253 SVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LIS 310
+CE M+E G + D+ + II+ FC+ A V+ + KM +++ + +IS
Sbjct: 853 WICE-MMERGFVVDNATLTLIITAFCEKSLVNRA--VWFFHKVTKMGLSPNLINYSSMIS 909
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRM------------------- 351
LC+ +VK A ++L++ K + +S+I LC+
Sbjct: 910 GLCKRG-SVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNY 968
Query: 352 -KDVHG----------------AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
+VH A+ L +M +G P + ++I + KAG+ + A E
Sbjct: 969 KPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYE 1028
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+++LM + G P+ TY ++ G G+ EEA ++LN +N VTY LI C
Sbjct: 1029 LMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQC 1088
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
K + + AL LN+M VG QP++ Y LI + C + + + +EKL +++ GL
Sbjct: 1089 KRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNM-MKDSEKLFDEVIKLGL 1143
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 147/325 (45%), Gaps = 5/325 (1%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
E++ ++ +F+++GK K A ++ + G V I + ++ ++A +V ++
Sbjct: 762 EVVECMVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDE 821
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M G PDS II +C+ G EA E+ + + +I++ C E
Sbjct: 822 MSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFC-EKS 880
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
V A+ + + +SS+I LC+ V A LL +M+ G P
Sbjct: 881 LVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHT 940
Query: 378 SVISAYSKAGDMTPAMEM-LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
S+I K G A + LKL+RS KP+V+TYT ++SGY ++ A E+L E K
Sbjct: 941 SLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRA-EMLFERMK 999
Query: 437 NHSRLSPV-TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+ TY TLI G+CK F A +L+ M + G PN YN ++ LC +
Sbjct: 1000 EQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRG-RA 1058
Query: 496 RTAEKLLEDMRLKGLHLNGITRALI 520
A KLL + +G+T ++
Sbjct: 1059 EEAFKLLNTGFQNQIEADGVTYTIL 1083
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 142/319 (44%), Gaps = 3/319 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I+ K G K AFE+ + G N T+ I L ++ + A+ + K+I +
Sbjct: 907 MISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSD 966
Query: 263 SL-PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
+ P+ +IS +CK K A +++ +E+ + P + LI C+ K
Sbjct: 967 NYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSK- 1025
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A ++++ S E ++S++ LC+ A LL+ + +IS
Sbjct: 1026 AYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILIS 1085
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
K DM A+ L M G +PD++ YT L++ + M+++ ++ +E K
Sbjct: 1086 EQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAP 1145
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+ TY ++I GYC+ ++ A+K +M D G P+ Y LI LC K A +L
Sbjct: 1146 TKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLC-KESRLDEARQL 1204
Query: 502 LEDMRLKGLHLNGITRALI 520
+ M KGL +TR +
Sbjct: 1205 YDTMIDKGLSPCEVTRVTL 1223
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 127/294 (43%), Gaps = 4/294 (1%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
V +I+ + K K A +F + + G V N TY I+ + F A+ +
Sbjct: 971 NVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELM 1030
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
E M G P++ I+ CK G+A+EA + + ++ LIS C+
Sbjct: 1031 ELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKR 1090
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ + AL L+ + I ++++I + CR + ++ L ++I G P
Sbjct: 1091 AD-MNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKET 1149
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+ S+I Y + ++ A++ + M G PD +Y L+SG +++EA ++ +
Sbjct: 1150 YTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMI 1209
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
VT TL YCK E+F A+ +L + + + + LI+ LC
Sbjct: 1210 DKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNK---KLWIRTVHTLIRKLC 1260
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 74/169 (43%), Gaps = 4/169 (2%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+ + LIA F + K + ++F++ G +ETY I R K A +
Sbjct: 1112 IHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQ 1171
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
KM + G PDS G +IS CK + EA +Y +K + P + L C+ +
Sbjct: 1172 KMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTE 1231
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI 365
+ A+ +L+ + +K I+ ++IR LC K V A K++
Sbjct: 1232 DFAS-AMVILERLN---KKLWIRTVHTLIRKLCCEKKVALAALFFHKLL 1276
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 65/162 (40%), Gaps = 9/162 (5%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
L+ A C K+ L+D V ++G T E +I + + K A + F K
Sbjct: 1117 TLIAAFCRQNMMKDSEKLFDEVIKLGLAP----TKETYTSMICGYCREKKVSLAVKFFQK 1172
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
D+GC + +Y I L + D A + + MI+ G P + +CK
Sbjct: 1173 MSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTED 1232
Query: 283 AKEAHVVYTLAR-EKKMYPPQSVVAFLISSLCQEDETVKLAL 323
A V+ L R KK++ V LI LC E + AL
Sbjct: 1233 FASAMVI--LERLNKKLWI--RTVHTLIRKLCCEKKVALAAL 1270
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 157/347 (45%), Gaps = 6/347 (1%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
L+ A+C S + + + + E G V N LI F KLG A +FN+
Sbjct: 108 LVDALCKSARISDASLILEDMIEAGCAPN----VVTYNTLINGFCKLGNMDEAVVLFNQM 163
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
+ C + TY I+ +++ + ++M++ G P+ ++ K GK
Sbjct: 164 LENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKY 223
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
+A + + + P +I C+ + + LA ++ + I ++
Sbjct: 224 IDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQ-LDLAYELFQLMTDRGCLPDIYTYNI 282
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
+I CR + A+ LL +M G PP +NS++S KA + A E+ +++R+ G
Sbjct: 283 MISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGG 342
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
DV T + L+ G ++++A ++L E ++N S V Y LI G+CK ++ D +L
Sbjct: 343 YFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSL 402
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+EM D G P V Y+ +I LC K+ R LL+ M +G+
Sbjct: 403 AFFSEMLDKGCVPTVITYSIVIDKLC-KSARVRDGCMLLKTMLERGV 448
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 162/372 (43%), Gaps = 21/372 (5%)
Query: 145 LGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELI 204
L +N +C S L+ C + ++ Y L D + EK V + N +I
Sbjct: 20 LFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEM----EKRGIVPHNAVYNTII 75
Query: 205 ALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL 264
G+ +A + + C + TY ++AL + A + E MIE G
Sbjct: 76 KGLCDNGRVDSALVHYRDMQRH-CAPSVITYTILVDALCKSARISDASLILEDMIEAGCA 134
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED---ETVKL 321
P+ +I+ FCK G EA V++ E P LI C+++ + KL
Sbjct: 135 PNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKL 194
Query: 322 ALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
+M+ KY +P +++++ SL + A L M+ P + FN
Sbjct: 195 LQEMV--------KYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFN 246
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+I + K G + A E+ +LM RG PD+YTY ++SG ++++A ++L +
Sbjct: 247 LMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEA 306
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
VTY++++ G CK + D A ++ +++ G +V + LI LC K+
Sbjct: 307 GCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLC-KSRRLDD 365
Query: 498 AEKLLEDMRLKG 509
AEKLL +M G
Sbjct: 366 AEKLLREMERNG 377
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 139/362 (38%), Gaps = 78/362 (21%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L++ F + K + A+++F C + TY I + + F A+ + ++M +
Sbjct: 2 NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G +P + II C G+ A V Y R+ + + SV+ + I
Sbjct: 62 RGIVPHNAVYNTIIKGLCDNGRVDSALVHY---RDMQRHCAPSVITYTI----------- 107
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
++ +LC+ + A +L MI G P +N++I
Sbjct: 108 -----------------------LVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLI 144
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ + K G+M A+ + M PDV+TY L+ GY + ++ ++L E K
Sbjct: 145 NGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCE 204
Query: 441 LSPVTYHTL-----------------------------------IRGYCKLEEFDCALKL 465
+ +TY+TL I +CK+ + D A +L
Sbjct: 205 PNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYEL 264
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG-----LHLNGITRALI 520
M D G P++ YN +I C +A A +LLE M G + N I L
Sbjct: 265 FQLMTDRGCLPDIYTYNIMISGAC-RANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLC 323
Query: 521 RA 522
+A
Sbjct: 324 KA 325
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 158/342 (46%), Gaps = 10/342 (2%)
Query: 201 NELIALFSKLGKGKAAFEVFNK--FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
N L+ K + A+++F G + C N TY I + + A+ + +M
Sbjct: 73 NCLLRTLVKARRHHQAYQIFRDELLGQH-CDTNHITYNTLIGGFCKAGDMERAFQLLAEM 131
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVV-AFLISSLCQEDE 317
E G PD I+ C G A + RE P SV+ L+ LC+ ++
Sbjct: 132 KERGHSPDVVTHSSIVQALCNTGNLSRAMQYF---RESVECAPDSVLFNILVHGLCKANQ 188
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
+ A M+++ S + ++S+I LC+ + A+ LL M+ P +N
Sbjct: 189 LSE-ARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYN 247
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
++I Y K G A ++++ M G PDV T+ L+SG+ ++++ACE+L+ KK
Sbjct: 248 TLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKG 307
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
+ VTY+ LI G C + A +LL+EM G+ P++ YN LI C +
Sbjct: 308 LCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFC-RNFQIEQ 366
Query: 498 AEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIENGEALVE 539
A ++ M +G+ +GI+ + AV L+ + + AL++
Sbjct: 367 AFQIQNLMVERGVIPDGISYCTL-AVALLKSERFDEAFALLD 407
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 184/437 (42%), Gaps = 57/437 (13%)
Query: 120 ESSLDSFELDLHEDFVLKVLETPLVLGENLVCFFKWVTSG----------VVDALLKAIC 169
E++L + +L + V +VL+ + +L FF+WVT + LL+ +
Sbjct: 22 EAALAKYSRNLVPNTVGRVLQVIKDVDVSLF-FFRWVTRSHRGESIHNNFTCNCLLRTLV 80
Query: 170 SSVGKKEVYALWDIVKEIGEK-EKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGC 228
+ + Y ++ + +G+ + +T N LI F K G + AF++ + + G
Sbjct: 81 KARRHHQAYQIFRD-ELLGQHCDTNHIT---YNTLIGGFCKAGDMERAFQLLAEMKERGH 136
Query: 229 VANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHV 288
+ T+ ++AL A + +E PDS ++ CK + EA
Sbjct: 137 SPDVVTHSSIVQALCNTGNLSRAMQYFRESVECA--PDSVLFNILVHGLCKANQLSEARQ 194
Query: 289 VYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSL 348
+ E+ + P LI LC+ ++ A +L+ + + ++++I
Sbjct: 195 MIEEMSERGIVPDVVTYNSLIDGLCKSYR-MEEARQLLETMVKRKVRPNLVTYNTLIYGY 253
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
C+ A L+ +MI G P FNS+IS + + + A E+L LM+ P++
Sbjct: 254 CKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNL 313
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI------------------ 450
TY L+SG + G+ EACE+L+E +TY++LI
Sbjct: 314 VTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNL 373
Query: 451 ---RG-------YCKL-------EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL-KA 492
RG YC L E FD A LL+ M D G PN+ +N L++ LC +
Sbjct: 374 MVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRR 433
Query: 493 LDWRTAEKLLEDMRLKG 509
LD A LL MR G
Sbjct: 434 LD--EARHLLAVMRRVG 448
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 111/258 (43%), Gaps = 1/258 (0%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
N TY I + A + E+MI++G+ PD +IS FC+ K +A V
Sbjct: 242 NLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVL 301
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
L ++ P LIS LC + A ++L + G I ++S+I CR
Sbjct: 302 HLMKKGLCAPNLVTYNVLISGLCDAGRANE-ACELLSEMDGRGILPDIITYNSLIGIFCR 360
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ A + + M+ G P + ++ A K+ A +L M G P+++T
Sbjct: 361 NFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFT 420
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
+ LM G +++EA +L ++ + TY L+ G CK D A ++L M
Sbjct: 421 FNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMV 480
Query: 471 DVGVQPNVDEYNKLIQSL 488
G+QP V ++ +L
Sbjct: 481 SEGIQPLVSSSGTIVHTL 498
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 121/291 (41%), Gaps = 1/291 (0%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+ N L+ K + A ++ + + G V + TY I+ L + + A + E M
Sbjct: 175 LFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETM 234
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
++ P+ +I +CK G AH + + +P LIS CQ+ +
Sbjct: 235 VKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKI 294
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
K A ++L + ++ +I LC + A LLS+M G P +NS
Sbjct: 295 DK-ACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNS 353
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I + + + A ++ LM RG+ PD +Y L + +EA +L+
Sbjct: 354 LIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAG 413
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + T+++L+ G C D A LL M+ VG P Y L+ LC
Sbjct: 414 AIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLC 464
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 107/254 (42%), Gaps = 1/254 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V N LI+ F + K A EV + C N TY I L + A +
Sbjct: 278 VVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLS 337
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M G LPD +I FC+ + ++A + L E+ + P L +L +
Sbjct: 338 EMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKS- 396
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
E A +LD+ + F+S++ LC + + A+ LL+ M G P + +
Sbjct: 397 ERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTY 456
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
+++ KAG + A E+L +M S G++P V + ++ A G+ + A ++
Sbjct: 457 EVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVA 516
Query: 437 NHSRLSPVTYHTLI 450
S+ +Y L+
Sbjct: 517 AESKACDPSYQKLL 530
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 168/370 (45%), Gaps = 18/370 (4%)
Query: 158 SGVVDALLKAICSSVGKKEVYALWDIVKEIGEKE--KGVLTVEILNELIALFSKLGKGKA 215
+ V+DA +++ K+ + ++ KE+ + + V T IL I F G
Sbjct: 173 NAVLDATIRS------KRNISFAENVFKEMLQSQVSPNVFTYNIL---IRGFCLAGNLDV 223
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A F++ GC+ N TY I+ + + D + + M G P+ +I+
Sbjct: 224 ALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVIN 283
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
C+ G+ KE V T ++ + LI C+E AL M +
Sbjct: 284 GLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGN-FHQALVMHAEMLRHGLS 342
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
++ ++S+I S+C+ +++ A L +M G P + +++ +S+ G M A +
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRV 402
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
LK M G P V TY L++G+ G+M +A +L + K+ V+Y T++ G+C+
Sbjct: 403 LKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCR 462
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE--KLLEDMRLKGLHLN 513
+ D AL++ +M G++P+ Y+ LIQ C + RT E L ++M GL +
Sbjct: 463 SYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQ---RRTKEACDLFDEMLRVGLPPD 519
Query: 514 GIT-RALIRA 522
T ALI A
Sbjct: 520 EFTYTALINA 529
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 151/332 (45%), Gaps = 2/332 (0%)
Query: 189 EKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
EK+ + V N LI + KL K FE+ G N +Y I L R
Sbjct: 232 EKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRM 291
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
V +M + G D +I +CK G +A V++ + P L
Sbjct: 292 KEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSL 351
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
I S+C+ + A + LD + +++++ + ++ A +L +MI G
Sbjct: 352 IHSMCKAGNMNR-ATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNG 410
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P +N++I+ + AG M A+ +L+ M+ +GL PDV +Y+ ++SG+ ++EA
Sbjct: 411 FSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ + + +TY +LI+G+C+ A L +EM VG+ P+ Y LI +
Sbjct: 471 RVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAY 530
Query: 489 CLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
C++ D + A +L +M KG+ + +T +++
Sbjct: 531 CMEG-DLQKAIQLHNEMVEKGVLPDVVTYSVL 561
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 140/306 (45%), Gaps = 10/306 (3%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I + G+ K V + G ++ TY I+ + F A + +M+
Sbjct: 279 NVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR 338
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DE 317
G P +I CK G A R + + P + L+ Q+ +E
Sbjct: 339 HGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNE 398
Query: 318 TVKLALDMLDD-FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
++ +M+D+ FS ++ ++++I C + A +L M +G P +
Sbjct: 399 AYRVLKEMIDNGFSP-----SVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSY 453
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
++V+S + ++ D+ A+ + + M ++G+KPD TY+ L+ G+ + +EAC++ +E +
Sbjct: 454 STVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLR 513
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
TY LI YC + A++L NEM + GV P+V Y+ LI L +A R
Sbjct: 514 VGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQA-RTR 572
Query: 497 TAEKLL 502
A++LL
Sbjct: 573 EAKRLL 578
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 128/328 (39%), Gaps = 65/328 (19%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K G A E ++ G N+ TY ++ S++ + A+ V ++MI+ G
Sbjct: 351 LIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNG 410
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETV 319
P +I+ C GK +A V +EK + P + ++S C+ DE +
Sbjct: 411 FSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 320 KLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
++ M+ IKP +SS+I+ C + A L +M+ G PP
Sbjct: 471 RVKRKMVAK--------GIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFT 522
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+ ++I+AY GD+ A+++ M +G+ PDV TY+ L++G + EA +L +
Sbjct: 523 YTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLF 582
Query: 436 KNHSRLSPVTYHTLI--------------------------------------------- 450
S S VTYHTLI
Sbjct: 583 YEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTA 642
Query: 451 -----RGYCKLEEFDCALKLLNEMKDVG 473
G+C+ + A L EM G
Sbjct: 643 YNVMIHGHCRGGDIRKAYSLYKEMVKSG 670
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 92/177 (51%), Gaps = 2/177 (1%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG-DMTPAMEMLKLM 399
F V++S R+ + A +++ + G PG +N+V+ A ++ +++ A + K M
Sbjct: 137 FDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
+ P+V+TY L+ G+ G ++ A + +K + VTY+TLI GYCKL +
Sbjct: 197 LQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
D +LL M G++PN+ YN +I LC + + +L +M +G L+ +T
Sbjct: 257 DDGFELLRSMALKGLEPNLISYNVVINGLCREG-RMKEISFVLTEMNKRGYSLDEVT 312
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 76/150 (50%), Gaps = 4/150 (2%)
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ-MEEACEIL 431
++VF+ V+ +YS+ + A+ ++ L ++ G P V +Y ++ + + A +
Sbjct: 134 SSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVF 193
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC-L 490
E ++ + TY+ LIRG+C D AL+ + M+ G PNV YN LI C L
Sbjct: 194 KEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKL 253
Query: 491 KALDWRTAEKLLEDMRLKGLHLNGITRALI 520
+ +D +LL M LKGL N I+ ++
Sbjct: 254 RKID--DGFELLRSMALKGLEPNLISYNVV 281
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 108/271 (39%), Gaps = 16/271 (5%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
+V N LI GK A V + G + +Y + R D A V
Sbjct: 414 SVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVK 473
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
KM+ G PD+ +I FC+ + KEA ++ + P + LI++ C E
Sbjct: 474 RKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCME 533
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ K A+ + ++ + + +S +I L + AK LL K+ E P +
Sbjct: 534 GDLQK-AIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVT 592
Query: 376 FN---------------SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
++ S+I + G MT A ++ + M + KPD Y ++ G+
Sbjct: 593 YHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCR 652
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
GG + +A + E K+ L VT L++
Sbjct: 653 GGDIRKAYSLYKEMVKSGFLLHTVTVIALVK 683
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 151/320 (47%), Gaps = 5/320 (1%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEA---LSRRKIFDWAWSVCE 256
N +I K+GK A +V + +G N TY I+ + R A ++ +
Sbjct: 233 FNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILK 292
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M+E P+S +I FCK A V+ + + + P L++ LC E
Sbjct: 293 EMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEG 352
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ + A +LD+ K + ++++I C+ K + A+ L + +G P F
Sbjct: 353 K-LNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITF 411
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N+++ Y K G M A + K+M +G P+ TY L+ G+ G+MEE +LNE +
Sbjct: 412 NTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQC 471
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ VTY+ LI +C+ +E A +L++EM D G++P+ YN L+ C++ + R
Sbjct: 472 RGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEG-NLR 530
Query: 497 TAEKLLEDMRLKGLHLNGIT 516
A L + M +G N +T
Sbjct: 531 AALNLRKQMEKEGRWANVVT 550
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 129/271 (47%), Gaps = 8/271 (2%)
Query: 269 KVGKIISWFCKG-GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLD 327
K+ I+ F KG + + ++L+ + S++A ++ E+ L L+
Sbjct: 125 KIRSILDSFVKGETNCSISLIFHSLSVCSGQFCANSIIADMLVLAYVENSKTVLGLEAFK 184
Query: 328 DFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG 387
K ++ + ++ +L + + G + + +MI P FN+VI+ K G
Sbjct: 185 RAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVG 244
Query: 388 DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ---MEEACEILNEAKKNHSRLSPV 444
+ A +++ M+ G P+V TY L+ GY G+ M +A IL E +N + V
Sbjct: 245 KLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSV 304
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLED 504
T++ LI G+CK E ALK+ EM+ G++P V YN L+ LC + A+ LL++
Sbjct: 305 TFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEG-KLNEAKVLLDE 363
Query: 505 MRLKGLHLNGIT-RALIRAV--KELEEDAIE 532
M L N IT ALI K+L E+A E
Sbjct: 364 MLSSNLKPNVITYNALINGYCKKKLLEEARE 394
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 137/282 (48%), Gaps = 1/282 (0%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
K GK AFE GC + TY + AL + +D ++ G P+
Sbjct: 160 LCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPN 219
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
+IS C+ GK +E+ + + +EK + P LI++ C+E + + +A++ L
Sbjct: 220 VVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGK-LDMAIEFL 278
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
D + I +++++ +LC+ + A + K+ G PP + +N+++SA +
Sbjct: 279 DCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSS 338
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
GD A+ M+ M S+G+ PDV TY L+S G ++EA +L + + + V+Y
Sbjct: 339 GDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSY 398
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
T++ G CK D A+++L M + G QPN Y LI+ +
Sbjct: 399 KTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGI 440
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 128/309 (41%), Gaps = 9/309 (2%)
Query: 201 NELIALFSKLGKGKAAFEVFNKF-GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N +I F GK A +VF + D C TY IEA D A + ++M+
Sbjct: 83 NIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEML 142
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---D 316
G PD+ I CK GK A + P L+ +L + D
Sbjct: 143 SRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWD 202
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
E K M + FS + +S +I SLCR + + L+ M +G P +
Sbjct: 203 EGEKW---MSEIFSRGCEPNVVT-YSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCY 258
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
+ +I+A+ + G + A+E L M G PD+ Y +M+ G + A EI + +
Sbjct: 259 DPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDE 318
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ +Y+T++ + AL ++++M G+ P+V YN LI LC +
Sbjct: 319 VGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGM-VD 377
Query: 497 TAEKLLEDM 505
A LL DM
Sbjct: 378 EAIGLLADM 386
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 122/273 (44%), Gaps = 14/273 (5%)
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
++E PD +IS FCK + + A V + K P +I + C + +
Sbjct: 35 ILEKHGKPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGK 94
Query: 318 TVKLALDMLDDFSGEAR-KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ LAL + ++ + K + ++ +I + + A LL +M+S G P +
Sbjct: 95 -IDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTY 153
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N + K G + A E ++ + SRG KPDV TY L+ N G+ +E + ++E
Sbjct: 154 NVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFS 213
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC------- 489
+ VTY LI C+ + + ++ L+ MK+ G+ P+ Y+ LI + C
Sbjct: 214 RGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDM 273
Query: 490 -LKALDWRTAEKLLEDMRLKGLHLNGITRALIR 521
++ LD + L D+ ++ N I AL +
Sbjct: 274 AIEFLDCMICDGFLPDI----VNYNTIMAALCK 302
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 133/318 (41%), Gaps = 38/318 (11%)
Query: 235 YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY-TLA 293
Y I + + A +V ++M G PD +I FC GK A V+ L
Sbjct: 47 YNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELL 106
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
++ P LI + E + AL +LD+ + ++ + R LC+
Sbjct: 107 KDNNCKPTLITYTILIEAYILEG-GIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGK 165
Query: 354 VHGA----KTL-------------------------------LSKMISEGPPPGNAVFNS 378
V A +TL +S++ S G P ++
Sbjct: 166 VDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSI 225
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+IS+ + G + ++ ++K+M+ +GL PD Y Y L++ + G+++ A E L+ +
Sbjct: 226 LISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDG 285
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
V Y+T++ CK D A+++ ++ +VG PNV YN ++ +L +R A
Sbjct: 286 FLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYR-A 344
Query: 499 EKLLEDMRLKGLHLNGIT 516
++ M KG+ + IT
Sbjct: 345 LGMISQMLSKGIDPDVIT 362
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 101/242 (41%), Gaps = 4/242 (1%)
Query: 191 EKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDW 250
E V+T IL I+ + GK + + + + G + Y I A R D
Sbjct: 217 EPNVVTYSIL---ISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDM 273
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A + MI G LPD I++ CK G A ++ E P S ++S
Sbjct: 274 AIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLS 333
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
+L + + AL M+ + + ++S+I LCR V A LL+ M+S
Sbjct: 334 ALWSSGDRYR-ALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQ 392
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P + +V+ KA + A+E+L M G +P+ TYT L+ G G +A E+
Sbjct: 393 PNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMEL 452
Query: 431 LN 432
N
Sbjct: 453 AN 454
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M ++ +PDV T L+ G+ N +++A ++ +K H + Y+ +I G+CK
Sbjct: 1 MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEK-HGKPDVFAYNAVISGFCKANR 59
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA---LDWRTAEKLLEDMRLK 508
+ A +L+ MK G P+V +N +I + C K L + E+LL+D K
Sbjct: 60 IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCK 112
>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g11690-like [Glycine max]
Length = 556
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 158/377 (41%), Gaps = 55/377 (14%)
Query: 176 EVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETY 235
V+ L +++E G V I LI K G A +F K G V NQ TY
Sbjct: 176 RVFRLLAVLEEFGLSPN----VVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTY 231
Query: 236 YFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE 295
+ ++ + + + E M +G +P++ +IS +C G +A V+ RE
Sbjct: 232 SVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMRE 291
Query: 296 KKMYPPQSVVAFLISSLCQED---ETVKLALDMLDDFSGEARKYAIKP----FSSVIRSL 348
K + LI LC+ E VKL + K + P ++ +I
Sbjct: 292 KGIACGVMTYNILIGGLCRGKKFGEAVKLV--------HKVNKVGLSPNIVTYNILINGF 343
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK----------- 397
C + + A L +++ S G P +N++I+ YSK ++ A++++K
Sbjct: 344 CDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSK 403
Query: 398 ------------------------LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
LM GL PDVYTY+ L+ G G M+EA +
Sbjct: 404 VTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKS 463
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
+ H + + V Y+T+I GYCK AL+LLNEM G+ PNV + + LC +
Sbjct: 464 LGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLC-RDE 522
Query: 494 DWRTAEKLLEDMRLKGL 510
W+ AE LL M GL
Sbjct: 523 KWKEAELLLGQMINSGL 539
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 143/321 (44%), Gaps = 23/321 (7%)
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH 287
C Y + A D A + MI G P S ++ + +A
Sbjct: 85 CSTYTPLYDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAW 144
Query: 288 VVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL--ALDMLDDFSGEARKYAIKPFSSVI 345
++ + + K + S +I+ C+ V++ L +L++F G + I ++++I
Sbjct: 145 WIFNVLKSKVVLNAYSF-GIMITGCCEAGYFVRVFRLLAVLEEF-GLSPNVVI--YTTLI 200
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
C+ DV AK L KM G P ++ +++ + K G +M + M G+
Sbjct: 201 DGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIV 260
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
P+ Y Y L+S Y N G +++A ++ E ++ +TY+ LI G C+ ++F A+KL
Sbjct: 261 PNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKL 320
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLC-LKALDWRTAEKLLEDMRLKGLHLNGITRALIRA-- 522
++++ VG+ PN+ YN LI C + +D TA +L ++ GL +T + A
Sbjct: 321 VHKVNKVGLSPNIVTYNILINGFCDVGKMD--TAVRLFNQLKSSGLSPTLVTYNTLIAGY 378
Query: 523 ------------VKELEEDAI 531
VKE+EE I
Sbjct: 379 SKVENLAGALDLVKEMEERCI 399
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 1/184 (0%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
T+ N LIA +SK+ A ++ + + ++ TY I+A +R D A +
Sbjct: 367 TLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMH 426
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
M ++G +PD +I C G KEA + E + P + +I C+E
Sbjct: 427 SLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKE 486
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ + AL +L++ + F S + LCR + A+ LL +MI+ G P ++
Sbjct: 487 GSSYR-ALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQMINSGLKPSVSL 545
Query: 376 FNSV 379
+ V
Sbjct: 546 YKMV 549
>gi|449467169|ref|XP_004151297.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
gi|449518833|ref|XP_004166440.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
Length = 609
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 163/396 (41%), Gaps = 57/396 (14%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA 216
T+ AL+ A+ K + L ++E G K +L LN +I FS+ G K A
Sbjct: 91 TTVTYTALVAALTRQKRFKAISGLLSEMEETGIKPDSIL----LNAIINAFSESGNVKEA 146
Query: 217 FEVFNKFGDYGCVA------------------------------------NQETYYFTIE 240
E+F K + GC N TY +
Sbjct: 147 MEIFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESMKLLELMTRTTNLKPNNRTYNILVG 206
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP 300
AL ++K AW+V +M+ +G PD + + + G+ +A + KK+ P
Sbjct: 207 ALCKKKSIKEAWNVVHQMLASGVQPDVVTYNTLARAYAQDGETNKAESIIVDMLNKKVNP 266
Query: 301 PQSVVAFLISSLCQED---ETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKD 353
+ ++ C++ E +++ M R I P F+S+I+ + D
Sbjct: 267 NERTCGIIVGGYCEQGNLAEALRVVYRM--------RDLGIHPNLVIFNSLIKGFLDIGD 318
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
G L+ M G P F+++++ +S AG M E+ M G++PD++ ++
Sbjct: 319 SDGVDKALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFDDMLKSGIEPDIHVFSI 378
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
L G+ G+ +A +LN K R + V + T+I G+C + + A K+ M D+
Sbjct: 379 LAKGFVRAGEPVKAESLLNFMSKYGVRPNVVIFTTIISGWCTAGKMEKAWKVFEHMCDMD 438
Query: 474 VQPNVDEYNKLIQSLCLKALDWRTAE--KLLEDMRL 507
V PN+ + LI WR E +++E+M +
Sbjct: 439 VSPNLKTFETLIWGYGEAKQPWRAEEILQMMEEMNV 474
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 171/356 (48%), Gaps = 32/356 (8%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
TV +L+ + + GK + A +FN + G TY + AL+R+K F +
Sbjct: 56 TVRSRTKLMNILVERGKPQEAQFIFNSLVEQGHRPTTVTYTALVAALTRQKRFKAISGLL 115
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISS---L 312
+M ETG PDS + II+ F + G KEA ++ E P S LI +
Sbjct: 116 SEMEETGIKPDSILLNAIINAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTLIKGYGII 175
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEG 368
+ +E++KL L+++ R +KP ++ ++ +LC+ K + A ++ +M++ G
Sbjct: 176 RKPEESMKL-LELM------TRTTNLKPNNRTYNILVGALCKKKSIKEAWNVVHQMLASG 228
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P +N++ AY++ G+ A ++ M ++ + P+ T ++ GY G + EA
Sbjct: 229 VQPDVVTYNTLARAYAQDGETNKAESIIVDMLNKKVNPNERTCGIIVGGYCEQGNLAEAL 288
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
++ + + V +++LI+G+ + + D K L M++ GV+P+V ++ ++
Sbjct: 289 RVVYRMRDLGIHPNLVIFNSLIKGFLDIGDSDGVDKALTMMEESGVKPDVITFSTIMNG- 347
Query: 489 CLKALDWRTA------EKLLEDMRLKG----LHLNGI-TRALIRAVKELEEDAIEN 533
W +A +++ +DM G +H+ I + +RA + ++ +++ N
Sbjct: 348 ------WSSAGRMDKCQEIFDDMLKSGIEPDIHVFSILAKGFVRAGEPVKAESLLN 397
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 145/308 (47%), Gaps = 2/308 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI+ K G+ + A ++F + G + Y I+ + D A + ++M++ G
Sbjct: 297 LISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKG 356
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P +I + EA + +EK + P LI+ C+ K A
Sbjct: 357 ISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCR-CANAKKA 415
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+ D+ K K ++S++ L + + A L K+ SEG P +FN++I
Sbjct: 416 FLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDG 475
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ ++ A E+LK M + PD T+ +M G+ G++EEA E+ +E K+ +
Sbjct: 476 HCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPD 535
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
++++TLI GY + + A ++ NEM D G P V YN L+Q LC K + AE+LL
Sbjct: 536 HISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLC-KNQEGDLAEELL 594
Query: 503 EDMRLKGL 510
++M KG+
Sbjct: 595 KEMVSKGM 602
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 152/326 (46%), Gaps = 5/326 (1%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L+ +C +E +++ + + G + V I N LI F G A ++
Sbjct: 296 SLISGMCKQGRLEEASKIFEEMVQKGLRPSAV----IYNTLIDGFCNKGNLDMASAYKDE 351
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G TY I AL + D A + +++ E G PD+ +I+ +C+
Sbjct: 352 MLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCAN 411
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
AK+A +++ + P + L+ L +++ +K A D+ + E + F+
Sbjct: 412 AKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNR-MKEADDLFKKITSEGVLPDVIMFN 470
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
++I C +V GA LL M PP FN+++ + + G + A E+ M+ R
Sbjct: 471 ALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRR 530
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G+KPD ++ L+SGY+ G +++A + NE + +TY+ L++G CK +E D A
Sbjct: 531 GIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLA 590
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSL 488
+LL EM G+ P+ Y LI+ +
Sbjct: 591 EELLKEMVSKGMTPDDTTYFTLIEGI 616
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 123/250 (49%), Gaps = 6/250 (2%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
+I C +A EA + +EK + P L+S + + T + A + +
Sbjct: 157 LIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRT-EAAWVLYAEMFRL 215
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
K ++ F+ +I LC+ + AK + M + G P +N+++ Y +G + A
Sbjct: 216 RIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAA 275
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
+L M+ + ++PD +TY L+SG G++EEA +I E + R S V Y+TLI G
Sbjct: 276 DAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDG 335
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT--AEKLLEDMRLKGL 510
+C D A +EM G+ P + YN LI +L ++ RT AE ++++++ KG+
Sbjct: 336 FCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHAL---FMEQRTDEAECMIKEIQEKGI 392
Query: 511 HLNGITRALI 520
+ IT ++
Sbjct: 393 SPDAITYNIL 402
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 140/338 (41%), Gaps = 42/338 (12%)
Query: 155 WVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVL-TVEILNELIALFSKLGKG 213
+ +S V D L+K+ C E + + +KE KGVL T+E N L++LF KL +
Sbjct: 148 FKSSIVFDYLIKSCCDMNRADEAFECFYTMKE-----KGVLPTIETCNSLLSLFLKLNRT 202
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
+AA+ ++ + ++ T+ I L + A M +G P+ I
Sbjct: 203 EAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTI 262
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEA 333
+ +C G+ + A + T + +K+ P D F+
Sbjct: 263 VHGYCSSGRVEAADAILTTMKRQKIEP--------------------------DSFT--- 293
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
+ S+I +C+ + A + +M+ +G P ++N++I + G++ A
Sbjct: 294 -------YGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMAS 346
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
M +G+ P + TY L+ + +EA ++ E ++ +TY+ LI GY
Sbjct: 347 AYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGY 406
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
C+ A L +EM G++P Y L+ L K
Sbjct: 407 CRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKK 444
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 122/268 (45%), Gaps = 14/268 (5%)
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF- 307
D A+ M E G LP E ++S F K + + A V+Y A ++ SV F
Sbjct: 168 DEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY--AEMFRLRIKSSVYTFN 225
Query: 308 -LISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLS 362
+I+ LC+E + L DF G +KP +++++ C V A +L+
Sbjct: 226 IMINVLCKEGK-----LKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILT 280
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG 422
M + P + + S+IS K G + A ++ + M +GL+P Y L+ G+ N G
Sbjct: 281 TMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKG 340
Query: 423 QMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
++ A +E K + TY++LI + D A ++ E+++ G+ P+ YN
Sbjct: 341 NLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYN 400
Query: 483 KLIQSLCLKALDWRTAEKLLEDMRLKGL 510
LI C + + + A L ++M G+
Sbjct: 401 ILINGYC-RCANAKKAFLLHDEMLASGI 427
>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
Length = 808
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 123/272 (45%)
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
+FN G N+ + I A +R + D A + E M G +PD+ +IS
Sbjct: 332 NIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSL 391
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
C+ G+ +A + + + P ++V LI C E VK + + + +
Sbjct: 392 CRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPG 451
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+K FSS+I +LC+ V K ++ M+ G P FNS++ Y G+M A +L
Sbjct: 452 VKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLD 511
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M S G++P+ Y Y L+ GY G++++A + + + + V Y ++ G +
Sbjct: 512 AMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQAR 571
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A K+ +EM + G ++ Y ++ LC
Sbjct: 572 RTTAAKKMFHEMIESGTTVSIHTYGVVLGGLC 603
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 150/326 (46%), Gaps = 15/326 (4%)
Query: 191 EKGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
E+GVL + I N +I K+ + A + K D G + TY I+ L + K D
Sbjct: 162 EQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMD 221
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A V E+M+E G+ P+S +I + G E+ V+ + P I
Sbjct: 222 KAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFI 281
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR-----MKDVHGAKTLLSKM 364
+L + T + A + D + K I +S+++ + DVH + + M
Sbjct: 282 HALFKHGRTNE-AKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVH---NIFNLM 337
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
+++G P VFN +I+AY++ G M AM + + M+++G+ PD T+ ++S G++
Sbjct: 338 LTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRL 397
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV-QPNVDEYNK 483
++A N S Y LI+G C E A +L++EM + + P V ++
Sbjct: 398 DDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSS 457
Query: 484 LIQSLCLKALDWRTAE-KLLEDMRLK 508
+I +LC + R AE K + DM ++
Sbjct: 458 IINNLCKEG---RVAEGKDIMDMMVQ 480
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 138/318 (43%), Gaps = 10/318 (3%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F K G+ A +F + + G + I+ L + K D A S+ +KM+++G
Sbjct: 140 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 199
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETV 319
PD II CK +A V E P LI +E+V
Sbjct: 200 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 259
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
++ M S + +S I +L + + AK + M+ +GP P ++++
Sbjct: 260 RVFKQM----SSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTM 315
Query: 380 ISAYSKAGD--MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+ Y+ A D + + LM ++G+ P+ + + L++ YA G M++A I + +
Sbjct: 316 LHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK 375
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
VT+ T+I C++ D AL N M D+GV P+ Y LIQ C +
Sbjct: 376 GMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHG-ELVK 434
Query: 498 AEKLLEDMRLKGLHLNGI 515
A++L+ +M K + G+
Sbjct: 435 AKELISEMMNKDIPPPGV 452
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 129/293 (44%), Gaps = 11/293 (3%)
Query: 233 ETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTL 292
TY I+ R D ++ ++++ G PD +I F K G+ +AH ++
Sbjct: 101 HTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLE 159
Query: 293 AREKKMYPPQSVVAFLISSLCQEDETVK---LALDMLDDFSGEARKYAIKPFSSVIRSLC 349
E+ + P + +I LC+ E K + M+D SG A + +S +I LC
Sbjct: 160 MMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVD--SGIAPD--LFTYSLIIDGLC 215
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
+ K + A+ +L +M+ G P + +NS+I YS +G ++ + K M S G+ P V
Sbjct: 216 KSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVD 275
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA--LKLLN 467
+ G+ EA I + + ++Y T++ GY + A + N
Sbjct: 276 NCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFN 335
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
M G+ PN +N LI + + A + EDM+ KG+ + +T A +
Sbjct: 336 LMLTKGIAPNKHVFNILINAYARCGM-MDKAMLIFEDMQNKGMIPDTVTFATV 387
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 109/271 (40%), Gaps = 4/271 (1%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA 216
+ V L++ C+ E+ +++ E+ K+ V+ + +I K G+
Sbjct: 415 SEAVYGCLIQGCCN---HGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEG 471
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
++ + G N T+ +E + A+++ + M G P+ G ++
Sbjct: 472 KDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDG 531
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
+CK G+ +A V+ K + P + + ++ L Q T A M +
Sbjct: 532 YCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTA-AKKMFHEMIESGTTV 590
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+I + V+ LCR A LL K+ + FN VISA K G A E+
Sbjct: 591 SIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELF 650
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
+ + GL P++ TY+ +++ EEA
Sbjct: 651 DAISTYGLVPNIQTYSMMITNLIKEESYEEA 681
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 77/148 (52%), Gaps = 4/148 (2%)
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
PP +N +I Y + + ++ + GL PD ++Y+ L+ G+ G++++A
Sbjct: 97 PPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHC 155
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ E + + +++I+ CK++E D A ++ +M D G+ P++ Y+ +I LC
Sbjct: 156 LFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLC 215
Query: 490 -LKALDWRTAEKLLEDMRLKGLHLNGIT 516
KA+D AE++LE M G N IT
Sbjct: 216 KSKAMD--KAERVLEQMVEAGTRPNSIT 241
>gi|147828617|emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
Length = 477
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 155/336 (46%), Gaps = 11/336 (3%)
Query: 189 EKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
++EK +T +I + + ++ K A VF K +Y C +Q++Y L
Sbjct: 77 KEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKMKEYECEPSQKSYITVFAILVGENQL 136
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS-VVAF 307
A M E G P + +I CK +A + + PP S
Sbjct: 137 KLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPHSYTYGT 196
Query: 308 LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
LI LC+ + + A ++ + +A + + S+I LC+ KD+ A LL +M S+
Sbjct: 197 LIXGLCRLGK-IGEAKELFKEMETKACSPTVVTYXSLIHGLCQSKDLDSAIRLLEEMASK 255
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P ++S++ + K+G + A+E+L +M SR P++ TY+ L+ G G+++EA
Sbjct: 256 GIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEA 315
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN-------VDE 480
EIL+ K R Y +I G+C + +F A L+EM G+ PN V
Sbjct: 316 VEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRI 375
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+N ++Q LC + + A +L MR +G+ ++ T
Sbjct: 376 HNIVVQGLCTEHPN--RAFQLYLSMRTRGISIDAKT 409
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 152/391 (38%), Gaps = 59/391 (15%)
Query: 145 LGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVK--------EIGEKEKGVLT 196
L E L+C K + + + +IC + G+ V+ D V+ E +K +T
Sbjct: 68 LAEELLCRMKEEKCNITEDIFLSICRAYGR--VHKPLDAVRVFRKMKEYECEPSQKSYIT 125
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRK-IFDWAWSVC 255
V A+ + K A + + G + + I+AL + D A +
Sbjct: 126 V------FAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIF 179
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+M G P S G +I C+ GK EA ++ K P LI LCQ
Sbjct: 180 REMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEMETKACSPTVVTYXSLIHGLCQS 239
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ + A+ +L++ + + K + +SS++ C+ A LL M+S P
Sbjct: 240 KD-LDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMIT 298
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+++++ K G + A+E+L M+ +GL+PD Y ++SG+ + + EA L+E
Sbjct: 299 YSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMV 358
Query: 436 KN-----------HSRLSPV------------------------------TYHTLIRGYC 454
H R+ + T+ +L+ +C
Sbjct: 359 LGGISPNRLTWSLHVRIHNIVVQGLCTEHPNRAFQLYLSMRTRGISIDAKTFDSLVNYFC 418
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
+ A L++EM G P+ +N ++
Sbjct: 419 NKGDLHKAAHLVDEMVLDGCIPDEXTWNAVV 449
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 13/184 (7%)
Query: 209 KLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSE 268
K G A E+ + + N TY + L + A + ++M G PD+
Sbjct: 273 KSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAG 332
Query: 269 KVGKIISWFCKGGKAKEA------HVVYTLAREKKMYPPQ-SVVAFLISSLCQEDETVKL 321
GKIIS FC K EA V+ ++ + + + ++ LC E
Sbjct: 333 LYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHPNRAF 392
Query: 322 ALDMLDDFSGEARKYAI--KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
L + S R +I K F S++ C D+H A L+ +M+ +G P +N+V
Sbjct: 393 QLYL----SMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEXTWNAV 448
Query: 380 ISAY 383
+ A+
Sbjct: 449 VCAF 452
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 145/308 (47%), Gaps = 8/308 (2%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+ + K+G+ A + + G N TY I + + AW V KMIE
Sbjct: 212 NVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIE 271
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDET 318
+ +P++ +I+ FCK G ++A + A +K+ ++V + LI SLC++
Sbjct: 272 SNCVPNAVTFNTLIAGFCKAGMLEDA--IKLFAEMEKIGCKATIVTYNTLIDSLCKKRGG 329
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
V A+D+ + G I ++S+I+ C + + A +M EG N + S
Sbjct: 330 VYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM--EGKCAPNVITYS 387
Query: 379 V-ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+ I K M A + L+ M++ G P V TY GL++G+ G+++ A + K
Sbjct: 388 ILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLA 447
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
+ V ++TLI G CK E + L+LL M G +P+V YN LI LC A
Sbjct: 448 GCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLC-SANRVED 506
Query: 498 AEKLLEDM 505
A++L + M
Sbjct: 507 AQRLFDGM 514
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 140/322 (43%), Gaps = 24/322 (7%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI F K G+ A VF+ G + N T + L A + +M
Sbjct: 36 NVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQA 95
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVA-----FLISSLCQE 315
LP S ++ F G+ ++A LA + M S VA ++ LC E
Sbjct: 96 GPFLPTSASHNILLRGFFMAGRVRDA-----LAHLQDMRKSSSSVATGTYNLVLKGLCWE 150
Query: 316 DETVKLALDMLDDFSGEARKYAIKP-------FSSVIRSLCRMKDVHGAKTLLSKMISEG 368
+++ L+ +F E + ++P S + RM + H L S M
Sbjct: 151 NKSAN-RLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHA---LFSAMTCS- 205
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P +N ++ Y K G A ++K + G +P+V+TY+ +++ Y ++EEA
Sbjct: 206 --PDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAW 263
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
E+ + +++ + VT++TLI G+CK + A+KL EM+ +G + + YN LI SL
Sbjct: 264 EVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSL 323
Query: 489 CLKALDWRTAEKLLEDMRLKGL 510
C K TA L + GL
Sbjct: 324 CKKRGGVYTAVDLFNKLEGAGL 345
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 97/183 (53%), Gaps = 16/183 (8%)
Query: 314 QEDETVKLALDMLDD-FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
+ D+ ++L ++L F+ A Y + +IR C+ +H A ++ S M S G P
Sbjct: 12 KHDQALRLFKEVLAGLFAPNAHTYNV-----LIRGFCKGGQMHQAVSVFSDMKSSGLLPN 66
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+ N+++ + G M+ A+++ + M++ P ++ L+ G+ G++ +A L
Sbjct: 67 ASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQ 126
Query: 433 EAKKNHSRLSPVTYHTLIRGYC-------KLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
+ +K+ S ++ TY+ +++G C +LE+ A++ EMK GV+P+++ Y+ L+
Sbjct: 127 DMRKSSSSVATGTYNLVLKGLCWENKSANRLEQ---AMEFFKEMKASGVEPDLESYHILL 183
Query: 486 QSL 488
+L
Sbjct: 184 SAL 186
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 109/285 (38%), Gaps = 36/285 (12%)
Query: 181 WDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIE 240
W++ ++ E V N LIA F K G + A ++F + GC A TY I+
Sbjct: 263 WEVFMKMIE-SNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLID 321
Query: 241 ALSRRKIFDW-AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
+L +++ + A + K+ G P +I FC + EA + Y E K
Sbjct: 322 SLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEA-MQYFDEMEGKCA 380
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P + LI LC+ +K A L+D + + +I C+ ++ A
Sbjct: 381 PNVITYSILIDGLCKV-RRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALL 439
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
KM G P +FN++I KA + +L M + G KPDV TY L+SG
Sbjct: 440 FFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLC 499
Query: 420 NGGQME--------------------------------EACEILN 432
+ ++E EA IL+
Sbjct: 500 SANRVEDAQRLFDGMACAPNVTTFNFLIRGLCAQKKVEEARNILD 544
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N+++S A A+ + K + + P+ +TY L+ G+ GGQM +A + ++ K
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ + T +TL+ G C++ + ALKL EM+ P +N L++ A R
Sbjct: 61 SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGF-FMAGRVR 119
Query: 497 TAEKLLEDMR 506
A L+DMR
Sbjct: 120 DALAHLQDMR 129
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 53/119 (44%)
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P +N +I + K G M A+ + M+S GL P+ T L+ G GQM A ++
Sbjct: 30 PNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKL 89
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
E + + +++ L+RG+ AL L +M+ YN +++ LC
Sbjct: 90 FREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLC 148
>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 151/331 (45%), Gaps = 10/331 (3%)
Query: 186 EIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRR 245
++G ++ GV + N L+ + A V++ G N TY I AL +
Sbjct: 61 DLGCRDPGV---RVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQN 117
Query: 246 KIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVV 305
D A + ++M G PD G I+S CK G+ +EA + P Q+
Sbjct: 118 DRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEAR-----GFLAETVPVQASY 172
Query: 306 AFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI 365
++ +LC E ++ ++++ + + +++++ + C+ +++ A +L++M+
Sbjct: 173 NAVVHALCGEFRMWEV-FSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMV 231
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
S G P F +++ + + G + A+ M M G P +Y L+ G G ++
Sbjct: 232 SMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLK 291
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
A + N K+N + TY TL+ G+ + D A+ + NEMK G +PNV Y +I
Sbjct: 292 GALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMI 351
Query: 486 QSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
LC K + + AE L++ M + N +T
Sbjct: 352 DVLCKKMM-FDQAESLIDKMLMDNCPPNTVT 381
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 144/333 (43%), Gaps = 15/333 (4%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+A++ A+C EV+++ + + + G + V I++ F K + + A +
Sbjct: 173 NAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDA----FCKARELRMACAILA 228
Query: 222 KFGDYGCVANQETYYFTIEAL-SRRKIFD----WAWSVCEKMIETGSLPDSEKVGKIISW 276
+ GC N T+ ++ K+ D W W M++ G P + +I
Sbjct: 229 RMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHW-----MVDEGWAPSTISYNVLIRG 283
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
C G K A + + + P + + L+ + + A+ + ++ K
Sbjct: 284 LCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGD-LDGAMLIWNEMKSSGCKP 342
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ ++++I LC+ A++L+ KM+ + PP FN++I G + A+ +
Sbjct: 343 NVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVF 402
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
MR G P+ TY L+ G G ++A ++ E N LS VTY+T+I C++
Sbjct: 403 HGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQM 462
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A+ LL M G+QP+ +N +I + C
Sbjct: 463 CMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYC 495
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 115/286 (40%), Gaps = 36/286 (12%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
L+ FS G A ++N+ GC N Y I+ L ++ +FD A S+ +KM+
Sbjct: 315 LVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDN 374
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P++ +I C G+ A V+ R +P D T
Sbjct: 375 CPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHP--------------NDRT---- 416
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++ ++ L R + A ++ +M++ G +N+VI+
Sbjct: 417 ------------------YNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINC 458
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ AM +L M +G++PD +T+ ++ Y G++ A +L + + +
Sbjct: 459 LCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRN 518
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
V Y LI C + A+ L +M G+ PN +N L++++
Sbjct: 519 VVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAI 564
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 4/137 (2%)
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV- 444
AGD+ L+ MR RG+ + +A G + A + A R V
Sbjct: 11 AGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVR 70
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK-ALDWRTAEKLLE 503
Y+ L+ + + + + M+ GV PNV YN LI++LC +D A K+L+
Sbjct: 71 VYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVD--AARKMLD 128
Query: 504 DMRLKGLHLNGITRALI 520
+M KG H + ++ I
Sbjct: 129 EMSRKGCHPDEVSHGTI 145
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 144/327 (44%), Gaps = 10/327 (3%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
+ +L+ L+ + K G + A +V D G + ++ L R + W +
Sbjct: 172 STAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLK 231
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
M G LPD I CK A V+ R + + +IS LC+
Sbjct: 232 GFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRS 291
Query: 316 DETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
A++ F E Y + P + +++ LC+ + AK LL +M G P
Sbjct: 292 G-----AVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKP 346
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
V+ +++ + K G A ++LK M S G++P+ Y L+ G GQ+ A ++L
Sbjct: 347 NIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLL 406
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
E K R TY+ L++G+ + + D A +LLNEM++ G+ PNV Y +I LC
Sbjct: 407 KEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQN 466
Query: 492 ALDWRTAEKLLEDMRLKGLHLNGITRA 518
+ + A LLE+M +GL N A
Sbjct: 467 G-ESKEAGNLLEEMISEGLKPNAFMYA 492
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 129/274 (47%), Gaps = 1/274 (0%)
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
AA +VF + C N+ TY I L R + A+ E+M++ G PD+ G ++
Sbjct: 261 AAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALM 320
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR 334
+ CKG + KEA + + P V L+ +E +T + A D+L +
Sbjct: 321 NGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAE-AFDILKEMISAGV 379
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
+ + ++IR LC++ + A LL +MI G P +N ++ + + D A E
Sbjct: 380 QPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFE 439
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+L MR+ G+ P+VY+Y +++G G+ +EA +L E + + Y LI G+
Sbjct: 440 LLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHS 499
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
K A + L +M V P++ YN LI+ L
Sbjct: 500 KEGNISLACEALEKMTKANVHPDLFCYNSLIKGL 533
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 137/283 (48%), Gaps = 2/283 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + K G + A ++ + + G N +TY +E + ++ S+ + M+ +G
Sbjct: 564 LIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSG 623
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD+ G +I + + A +V T + + P + + LIS LC+ + K A
Sbjct: 624 DKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEK-A 682
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+ +LD+ + E + I ++++I CR D+ A+ + ++++G P + ++I
Sbjct: 683 VGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDG 742
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
K GD+T A ++ K M RG+ PD + Y L +G ++ +E+A L E N +
Sbjct: 743 NCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQAL-FLTEEMFNRGYAN 801
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
++TL+ G+CK + KLL+ M D + PN K++
Sbjct: 802 VSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVV 844
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 157/331 (47%), Gaps = 5/331 (1%)
Query: 181 WDIVKEIGEKEKGVLTVEIL-NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI 239
+DI+KE+ GV +I+ + LI K+G+ A ++ + G + TY +
Sbjct: 368 FDILKEM--ISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLM 425
Query: 240 EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
+ ++ D A+ + +M +G LP+ G +I+ C+ G++KEA + + +
Sbjct: 426 QGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLK 485
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P + A LI +E + LA + L+ + + ++S+I+ L + + A+
Sbjct: 486 PNAFMYAPLIIGHSKEG-NISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEE 544
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
+++ G P ++ +I Y K G++ A ++L+ M + GLKP+ TYT L+ GY
Sbjct: 545 YYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYF 604
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
E+ IL + + Y +IR + E + A +L E++ G+ P++
Sbjct: 605 KSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLH 664
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
Y+ LI LC K D A LL++M +GL
Sbjct: 665 IYSSLISGLC-KIADMEKAVGLLDEMAKEGL 694
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 136/305 (44%), Gaps = 3/305 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI S +G+ + A E + + G V ++ TY I + + A + +M+
Sbjct: 527 NSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLN 586
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
+G P+++ ++ + K ++ + P + +I +L + E ++
Sbjct: 587 SGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRS-ENME 645
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
+A +L + + +SS+I LC++ D+ A LL +M EG PG +N++I
Sbjct: 646 VAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALI 705
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ ++GD++ A + + ++GL P+ TYT L+ G G + +A ++ E
Sbjct: 706 DGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIA 765
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
Y+ L G + + AL L EM + G NV +N L+ C + + EK
Sbjct: 766 PDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-NVSLFNTLVHGFCKRG-KLQETEK 823
Query: 501 LLEDM 505
LL M
Sbjct: 824 LLHVM 828
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 117/256 (45%), Gaps = 10/256 (3%)
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALD 324
P + + ++ + K G + A V + + + P + L+ L + D A++
Sbjct: 171 PSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRAD-----AME 225
Query: 325 MLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
+L G I P +S+ I + C+ +D AK + +M +N +I
Sbjct: 226 LLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMI 285
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
S ++G + A + M GL PD +TY LM+G G +++EA +L+E + +
Sbjct: 286 SGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLK 345
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+ V Y TL+ G+ K + A +L EM GVQPN Y+ LI+ LC K A K
Sbjct: 346 PNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLC-KIGQLGRASK 404
Query: 501 LLEDMRLKGLHLNGIT 516
LL++M GL + T
Sbjct: 405 LLKEMIKVGLRPDTFT 420
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 89/412 (21%), Positives = 165/412 (40%), Gaps = 18/412 (4%)
Query: 115 VDGYLESSLDSFELDLHEDFVLKVLETPLVLGENLV-CFFKWVTSGVVDALLKAICSSVG 173
VDG+++ + D+ ++ + ++ ++ +NL+ K G LLK +
Sbjct: 355 VDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGL 414
Query: 174 KKEVYALWDIVKEIGEKEKGVLTVEILNEL---------------IALFSKLGKGKAAFE 218
+ + + +++ ++ E+LNE+ I + G+ K A
Sbjct: 415 RPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGN 474
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+ + G N Y I S+ A EKM + PD +I
Sbjct: 475 LLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLS 534
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
G+ +EA Y +++ + P + + LI C+ K A +L K
Sbjct: 535 TVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEK-ADQLLRQMLNSGLKPNA 593
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
++ ++ + D ++L M+ G P N ++ VI S++ +M A +L
Sbjct: 594 DTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTE 653
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
+ GL PD++ Y+ L+SG ME+A +L+E K V Y+ LI G+C+ +
Sbjct: 654 VEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGD 713
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
A + + + G+ PN Y LI C K D A L ++M +G+
Sbjct: 714 ISRARNVFDSILAKGLVPNCVTYTALIDGNC-KNGDITDAFDLYKEMLDRGI 764
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 99/267 (37%), Gaps = 63/267 (23%)
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKM 364
+SSL + L +L DF +R P F+ + SLC A LL +M
Sbjct: 82 VSSLIFGGRSHSLHPKLLLDFFYWSRPRIAPPSADAFARLAASLCAASLFPQANGLLHQM 141
Query: 365 I-----------------------SEGPPPGNAVFNSVISAYSKAGD------------- 388
I S P P AV + ++ Y K G
Sbjct: 142 ILAHPHPPLVLASIQRAIQDTDHRSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMAD 201
Query: 389 --MTP----------------AMEML----KLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
+ P AME+L M G+ PDVYTY+ + + +
Sbjct: 202 LGLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDA 261
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A ++ E ++ ++ VTY+ +I G C+ + A EM D G+ P+ Y L+
Sbjct: 262 AKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMN 321
Query: 487 SLCLKALDWRTAEKLLEDMRLKGLHLN 513
LC K + A+ LL++M GL N
Sbjct: 322 GLC-KGSRLKEAKALLDEMSCSGLKPN 347
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/243 (19%), Positives = 101/243 (41%), Gaps = 5/243 (2%)
Query: 189 EKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
EK V + I + LI+ K+ + A + ++ G Y I+ R
Sbjct: 655 EKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDI 714
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
A +V + ++ G +P+ +I CK G +A +Y ++ + P + V +
Sbjct: 715 SRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGI-APDAFVYNV 773
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYA-IKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
+++ C + ++ AL + ++ R YA + F++++ C+ + + LL M+
Sbjct: 774 LATGCSDAADLEQALFLTEEMFN--RGYANVSLFNTLVHGFCKRGKLQETEKLLHVMMDR 831
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEML-KLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
P V+S + KAG + A + +L + + + ++ L + N G +
Sbjct: 832 EIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKKASQSATDRFSLLFTDMINKGLIPP 891
Query: 427 ACE 429
C+
Sbjct: 892 KCD 894
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 160/350 (45%), Gaps = 6/350 (1%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
V +AL+ C KEV+ L + E G + V+T + +I+ S +G + A V
Sbjct: 251 VYNALINGFCREYKVKEVFLLLGQMVEKG-IDPNVIT---YSTVISSLSGIGNVELALAV 306
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
+ K GC N T+ ++ R A ++ +M E G P+ +I C
Sbjct: 307 WAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCS 366
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
GK EA V + P S LI + + V A ++ + +
Sbjct: 367 HGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVG-ASEIWNKMMTNGCIPNVV 425
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
++S++ LCR A +L+ KM ++ PP FN+ I +G + A+ + M
Sbjct: 426 VYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQM 485
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
G P++ TY ++ G +++EA E++ E ++ L+ VTY+T+ G+C + +F
Sbjct: 486 EQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKF 545
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
+ ALKLL +M GV+P+ YN L + C++ +TA +LL+ + G
Sbjct: 546 EEALKLLGKMLVGGVKPDAITYNTLTYAYCMQG-KVKTAIQLLDKLSAGG 594
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 135/313 (43%), Gaps = 19/313 (6%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I + ++G + A ++F + ++GC + Y ++A+ F + M G
Sbjct: 120 VINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDG 179
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P+ ++ CK + A + K P +ISS+ + +
Sbjct: 180 KEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKV---- 235
Query: 323 LDMLDDFSGEARKYAIK------PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
EAR+ +I+ ++++I CR V LL +M+ +G P +
Sbjct: 236 --------EEARELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITY 287
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
++VIS+ S G++ A+ + M RG P+VYT+T LM GY G++ EA I N +
Sbjct: 288 STVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAE 347
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ V Y+TLI G C + A+ + ++M+ G PNV Y LI KA D
Sbjct: 348 EGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFA-KAGDLV 406
Query: 497 TAEKLLEDMRLKG 509
A ++ M G
Sbjct: 407 GASEIWNKMMTNG 419
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 147/346 (42%), Gaps = 19/346 (5%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
TV+I N L+ + + +++ G N TY ++AL + D A +
Sbjct: 148 TVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLL 207
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+M G PD +IS K GK +EA + + P SV LI+ C+E
Sbjct: 208 VEMSNKGCEPDVVSYTTVISSMSKLGKVEEAREL-----SIRFQPNVSVYNALINGFCRE 262
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ VK +L + + +S+VI SL + +V A + +KM G P
Sbjct: 263 YK-VKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYT 321
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
F S++ Y G + A+ + M G +P+V Y L+ G + G+M EA + ++ +
Sbjct: 322 FTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKME 381
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL-- 493
+N + TY LI G+ K + A ++ N+M G PNV Y ++ LC ++
Sbjct: 382 RNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFS 441
Query: 494 -DWRTAEKLLED----------MRLKGLHLNGITRALIRAVKELEE 528
W EK+ D +KGL +G I ++E+
Sbjct: 442 QAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQ 487
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 126/308 (40%), Gaps = 38/308 (12%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F+K G A E++NK GC+ N Y + L R +F AWS+ EKM
Sbjct: 395 LIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDN 454
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P++ I C G+ + A I+ CQ
Sbjct: 455 CPPNTVTFNTFIKGLCCSGRVECA----------------------INLFCQ-------- 484
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++ + IK ++ V+ L + + A L+++M +G +N++
Sbjct: 485 ---MEQYGCSPN---IKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGG 538
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ G A+++L M G+KPD TY L Y G+++ A ++L++ +
Sbjct: 539 FCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVP 598
Query: 443 PV-TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
V Y +L+ G C + A+ L++M + G+ N +N L++ L +L +
Sbjct: 599 EVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGL-FNSLGHLGPIHI 657
Query: 502 LEDMRLKG 509
L+D+ G
Sbjct: 658 LDDILTSG 665
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 72/148 (48%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+ +I L R DV G + LL +M EG +F +VI+ Y + G A++M +R
Sbjct: 82 YQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRIR 141
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G +P V Y L+ + + + I + K++ + TY+ L++ CK D
Sbjct: 142 EFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVD 201
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSL 488
A KLL EM + G +P+V Y +I S+
Sbjct: 202 GACKLLVEMSNKGCEPDVVSYTTVISSM 229
>gi|255569207|ref|XP_002525572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535151|gb|EEF36831.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 687
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 118/459 (25%), Positives = 187/459 (40%), Gaps = 102/459 (22%)
Query: 104 LENVLSLLQSSVDGYLESSLDSFELDL-HEDFVLKVLETPLVLGENLVCFFKWVTSGVVD 162
LE V S+L VD Y+ S S L+L HE +L + + GV +
Sbjct: 183 LETVYSML---VDCYVTESKVSLALNLIHEIKLLNIFPS----------------MGVCN 223
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGV-LTVEILNELIALFSKLGKGKAAFEVFN 221
+LLKA+ S ++ WDI++ G + G+ L IL+ I + G ++ +++
Sbjct: 224 SLLKALLRS---HQLDLAWDILE--GMQSFGMHLNASILSLFIESYCAEGNIQSGWKILM 278
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ +YG A+ Y I+AL + A S+ KMI G DS V +I +CK G
Sbjct: 279 EMKNYGIKADVIAYTIVIDALCKISCVKVATSLLFKMIHCGISVDSVSVSSVIDGYCKKG 338
Query: 282 KAK--------------------------------EAHVVYTLAREKKMYPPQSVVAFLI 309
++ EA + E +YP +I
Sbjct: 339 RSDKAINLLNFFNVRPNIFVYSSFMTKLCKDGNMLEASKTFQEMSEFGLYPDCFCYTIII 398
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMI 365
C+ + K + GE K+ I P ++ +I + C+ D+ A+ LL +M+
Sbjct: 399 GGYCKVGDINKAF-----QYLGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRMM 453
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS------------------------ 401
EG P FN +I + K G + A E+L +MRS
Sbjct: 454 LEGLIPDVVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLIARGYPN 513
Query: 402 -----------RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
RGL PDV T+T ++ G++ G EEA + + + H + VT L+
Sbjct: 514 EAKDILHELIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTCSALL 573
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
GYC+ D A L +M D G++P++ YN LI C
Sbjct: 574 NGYCRARRMDEANALFLKMLDAGLKPDLVLYNNLIHGFC 612
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 101/213 (47%), Gaps = 5/213 (2%)
Query: 298 MYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGA 357
M+ S+++ I S C E ++ +L + K + ++ VI +LC++ V A
Sbjct: 250 MHLNASILSLFIESYCAEGN-IQSGWKILMEMKNYGIKADVIAYTIVIDALCKISCVKVA 308
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
+LL KMI G + +SVI Y K G A+ +L R P+++ Y+ M+
Sbjct: 309 TSLLFKMIHCGISVDSVSVSSVIDGYCKKGRSDKAINLLNFFNVR---PNIFVYSSFMTK 365
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
G M EA + E + Y +I GYCK+ + + A + L EM G+ P+
Sbjct: 366 LCKDGNMLEASKTFQEMSEFGLYPDCFCYTIIIGGYCKVGDINKAFQYLGEMLKFGITPS 425
Query: 478 VDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
V Y LI + C K+ D AE LL+ M L+GL
Sbjct: 426 VTTYTLLINACC-KSGDMAMAEYLLQRMMLEGL 457
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 114/288 (39%), Gaps = 5/288 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I + K+G AF+ + +G + TY I A + A + ++M+ G
Sbjct: 397 IIGGYCKVGDINKAFQYLGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEG 456
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+PD +I F K G ++A + + R M P LI SL + A
Sbjct: 457 LIPDVVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLIARGYPNE-A 515
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
D+L + + F+ VI + + A + S M P +++++
Sbjct: 516 KDILHELIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTCSALLNG 575
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y +A M A + M GLKPD+ Y L+ G+ + G M AC ++ + +
Sbjct: 576 YCRARRMDEANALFLKMLDAGLKPDLVLYNNLIHGFCSAGNMNAACNLVAMMIDDGFLPN 635
Query: 443 PVTYHTLIRGY----CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
T+ G+ K E +LKL + +VDE+ ++Q
Sbjct: 636 ITTHRAFALGFEKKWVKNPELHASLKLKQILLTHSTCLDVDEHLAMMQ 683
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 53/270 (19%), Positives = 103/270 (38%), Gaps = 37/270 (13%)
Query: 286 AHVVYTLAREKKMYPPQSVVAFLISSL---CQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+++ L K+ Y ++ FL+ ++ E+E L ++ D +G K +S
Sbjct: 130 CRLIHILVYGKRNYRVMDLILFLVRNIGGAVGEEELCDLLFKLVYD-TGFGTKDLETVYS 188
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
++ V A L+ ++ P V NS++ A ++ + A ++L+ M+S
Sbjct: 189 MLVDCYVTESKVSLALNLIHEIKLLNIFPSMGVCNSLLKALLRSHQLDLAWDILEGMQSF 248
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G+ + + + Y G ++ +IL E K + + Y +I CK+ A
Sbjct: 249 GMHLNASILSLFIESYCAEGNIQSGWKILMEMKNYGIKADVIAYTIVIDALCKISCVKVA 308
Query: 463 LKLLNEMKDVG--------------------------------VQPNVDEYNKLIQSLCL 490
LL +M G V+PN+ Y+ + LC
Sbjct: 309 TSLLFKMIHCGISVDSVSVSSVIDGYCKKGRSDKAINLLNFFNVRPNIFVYSSFMTKLC- 367
Query: 491 KALDWRTAEKLLEDMRLKGLHLNGITRALI 520
K + A K ++M GL+ + +I
Sbjct: 368 KDGNMLEASKTFQEMSEFGLYPDCFCYTII 397
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 152/325 (46%), Gaps = 7/325 (2%)
Query: 203 LIALFSKLGKGKA---AFEVFNKFGD-YGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
LI L L K K A+++F+KF G +Y I L + AW + + M
Sbjct: 755 LIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDM 814
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
G PD+ +++ K GK E +Y ++ P +ISSL + +
Sbjct: 815 KNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNL 874
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
K ALD D + + + +I L ++ + A L +M G P A+FN
Sbjct: 875 DK-ALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNI 933
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I+ Y K GD A ++ K M + G++PD+ +YT L+ G+++EA NE K
Sbjct: 934 LINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTG 993
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
+ Y+ +I G K + + AL L NEM++ G+ P++ YN L+ +L L + A
Sbjct: 994 LDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGM-VEQA 1052
Query: 499 EKLLEDMRLKGLHLNGIT-RALIRA 522
+++ E+++L GL + T ALIR
Sbjct: 1053 KRMYEELQLAGLEPDVFTYNALIRG 1077
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 131/305 (42%), Gaps = 4/305 (1%)
Query: 181 WDIVKEIGEKEKGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI 239
WD+ K++ K G N L+A+ K GK FE++ + C + TY I
Sbjct: 808 WDLFKDM--KNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVI 865
Query: 240 EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
+L++ D A ++ + P G +I K G+ +EA ++ +
Sbjct: 866 SSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCK 925
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P ++ LI+ + +T + A + E + +K ++ ++ LC V A
Sbjct: 926 PNCAIFNILINGYGKIGDT-ETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALY 984
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
+++ S G P +N +I+ K+ M A+ + MR+RG+ PD+YTY LM
Sbjct: 985 YFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLG 1044
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
G +E+A + E + TY+ LIRGY E + A + M G PN+
Sbjct: 1045 LAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIG 1104
Query: 480 EYNKL 484
Y +L
Sbjct: 1105 TYAQL 1109
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 138/299 (46%), Gaps = 12/299 (4%)
Query: 194 VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWS 253
V+T IL +++ + A F+V K G + N TY I L R + A
Sbjct: 367 VVTFTILVDVLCKARDFDEAFATFDVMRK---QGILPNLHTYNTLICGLLRAGRIEDALK 423
Query: 254 VCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC 313
+ M G P + I +F K G+ +A + + K + P + SL
Sbjct: 424 LLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSL- 482
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
E ++ A M F+G R+ + P ++ +++ ++ V A LLS+MI G
Sbjct: 483 AEMGRLREAKTM---FNG-LRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGC 538
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
P V NS+I + KAG + A +M M+ L P V TY L+SG G++++A E
Sbjct: 539 EPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIE 598
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ + + ++++TL+ +CK +E + ALK+ ++M + +P+V YN +I L
Sbjct: 599 LFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGL 657
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 145/329 (44%), Gaps = 9/329 (2%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
L+ A+C++ + L+ +K G K V+ + +L++ F+ G E +++
Sbjct: 302 VLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDK----FNDFGDLDTFKEFWSQ 357
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + + T+ ++ L + + FD A++ + M + G LP+ +I + G+
Sbjct: 358 MEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGR 417
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
++A + + P I + ET K A++ + + I +
Sbjct: 418 IEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGK-AVETFEKMKAKGIVPNIVACN 476
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+ + SL M + AKT+ + + G P + +N ++ YSK G + A+ +L M
Sbjct: 477 ASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRN 536
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFD 460
G +PDV L+ G+++EA ++ + K +LSP VTY+TL+ G K
Sbjct: 537 GCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKD--MKLSPTVVTYNTLLSGLGKEGRVQ 594
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A++L M + PN +N L+ C
Sbjct: 595 KAIELFESMIEKKCSPNTISFNTLLDCFC 623
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 155/358 (43%), Gaps = 6/358 (1%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+ KA+ G +++ + + +++ G VL N LI L + G A EV+ +
Sbjct: 162 TIFKALSIRGGLRQMTTVLNKMRKAG----FVLNAYSYNGLIHLLIQSGFCGEALEVYRR 217
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + +TY + AL +++ + + ++M + G P+ I + GK
Sbjct: 218 MVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGK 277
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
EA+ ++ ++ P LI +LC + ++ A ++ K +
Sbjct: 278 IDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQ-LENAKELFVKMKANGHKPDQVIYI 336
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+++ D+ K S+M ++G P F ++ KA D A +MR +
Sbjct: 337 TLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQ 396
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G+ P+++TY L+ G G++E+A ++L + + + TY+ I + K E A
Sbjct: 397 GILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKA 456
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
++ +MK G+ PN+ N + SL + R A+ + +R GL + +T ++
Sbjct: 457 VETFEKMKAKGIVPNIVACNASLYSLA-EMGRLREAKTMFNGLRENGLAPDSVTYNMM 513
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 135/323 (41%), Gaps = 17/323 (5%)
Query: 200 LNELIALFSKL---GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
L+ + +F L G + V NK G V N +Y I L + A V
Sbjct: 157 LDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYR 216
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKK---MYPPQSVVAFLISSLC 313
+M+ G P + ++ GK +++ +V L +E + + P I L
Sbjct: 217 RMVSEGLKPSLKTYSALMVAL---GKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLG 273
Query: 314 QE---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
+ DE ++ M D+ G + ++ +I +LC + AK L KM + G
Sbjct: 274 RAGKIDEAYEIFRRMDDEGCGPD----LVTYTVLIDALCNAGQLENAKELFVKMKANGHK 329
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P ++ +++ ++ GD+ E M + G PDV T+T L+ +EA
Sbjct: 330 PDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFAT 389
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
+ +K + TY+TLI G + + ALKLL M+ VGVQP YN I
Sbjct: 390 FDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFG- 448
Query: 491 KALDWRTAEKLLEDMRLKGLHLN 513
K+ + A + E M+ KG+ N
Sbjct: 449 KSGETGKAVETFEKMKAKGIVPN 471
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 117/288 (40%), Gaps = 8/288 (2%)
Query: 182 DIVKEIGEKEK-GVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI 239
D +K +G E GV T N I F K G+ A E F K G V N ++
Sbjct: 420 DALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASL 479
Query: 240 EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
+L+ A ++ + E G PDS ++ + K G+ EA + +
Sbjct: 480 YSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCE 539
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P VV LI SL + V A M D + +++++ L + V A
Sbjct: 540 PDVIVVNSLIDSLYKAGR-VDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIE 598
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
L MI + P FN+++ + K ++ A++M M KPDV TY ++ G
Sbjct: 599 LFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLI 658
Query: 420 NGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKL 465
++ A ++ KK+ + P VT TL+ G K + A+ +
Sbjct: 659 KENKVNHAFWFFHQLKKS---MHPDHVTICTLLPGLVKCGQIGDAISI 703
>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
Length = 845
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 123/272 (45%)
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
+FN G N+ + I A +R + D A + E M G +PD+ +IS
Sbjct: 409 NIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSL 468
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
C+ G+ +A + + + P ++V LI C E VK + + + +
Sbjct: 469 CRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPG 528
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+K FSS+I +LC+ V K ++ M+ G P FNS++ Y G+M A +L
Sbjct: 529 VKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLD 588
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M S G++P+ Y Y L+ GY G++++A + + + + V Y ++ G +
Sbjct: 589 AMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQAR 648
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A K+ +EM + G ++ Y ++ LC
Sbjct: 649 RTTAAKKMFHEMIESGTTVSIHTYGVVLGGLC 680
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 147/327 (44%), Gaps = 16/327 (4%)
Query: 191 EKGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
E+GVL + I N +I K+ + A + K D G + TY I+ L + K D
Sbjct: 238 EQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMD 297
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A V E+M+E G+ P+S +I + G E+ V+ + P I
Sbjct: 298 KAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFI 357
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDV------HGAKTLLSK 363
+L + T + A + D + K I +S+ +C H + +
Sbjct: 358 HALFKHGRTNE-AKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWH---NIFNL 413
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
M+++G P VFN +I+AY++ G M AM + + M+++G+ PD T+ ++S G+
Sbjct: 414 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 473
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV-QPNVDEYN 482
+++A N S Y LI+G C E A +L++EM + + P V ++
Sbjct: 474 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 533
Query: 483 KLIQSLCLKALDWRTAE-KLLEDMRLK 508
+I +LC + R AE K + DM ++
Sbjct: 534 SIINNLCKEG---RVAEGKDIMDMMVQ 557
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 136/320 (42%), Gaps = 13/320 (4%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F K G+ A +F + + G + I+ L + K D A S+ +KM+++G
Sbjct: 216 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 275
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETV 319
PD II CK +A V E P LI +E+V
Sbjct: 276 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 335
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
++ M S + +S I +L + + AK + M+ +GP P + + S
Sbjct: 336 RVFKQM----SSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKP-DIISYST 390
Query: 380 ISAYSKAGDMTPAMEM----LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+++ +T M LM ++G+ P+ + + L++ YA G M++A I + +
Sbjct: 391 NASWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQ 450
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
VT+ T+I C++ D AL N M D+GV P+ Y LIQ C +
Sbjct: 451 NKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHG-EL 509
Query: 496 RTAEKLLEDMRLKGLHLNGI 515
A++L+ +M K + G+
Sbjct: 510 VKAKELISEMMNKDIPPPGV 529
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 133/315 (42%), Gaps = 16/315 (5%)
Query: 216 AFEVFNKFGDYGCVANQ----ETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVG 271
A E+F + + C + TY I+ R D ++ ++++ G PD
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY- 214
Query: 272 KIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK---LALDMLDD 328
+I F K G+ +AH ++ E+ + P + +I LC+ E K + M+D
Sbjct: 215 SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVD- 273
Query: 329 FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD 388
SG A + +S +I LC+ K + A+ +L +M+ G P + +NS+I YS +G
Sbjct: 274 -SGIAPD--LFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGM 330
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHT 448
++ + K M S G+ P V + G+ EA I + + ++Y T
Sbjct: 331 WNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYST 390
Query: 449 LIRGYCKLEEFDCAL---KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
C + + N M G+ PN +N LI + + A + EDM
Sbjct: 391 NASWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGM-MDKAMLIFEDM 449
Query: 506 RLKGLHLNGITRALI 520
+ KG+ + +T A +
Sbjct: 450 QNKGMIPDTVTFATV 464
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 109/271 (40%), Gaps = 4/271 (1%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA 216
+ V L++ C+ E+ +++ E+ K+ V+ + +I K G+
Sbjct: 492 SEAVYGCLIQGCCN---HGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEG 548
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
++ + G N T+ +E + A+++ + M G P+ G ++
Sbjct: 549 KDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDG 608
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
+CK G+ +A V+ K + P + + ++ L Q T A M +
Sbjct: 609 YCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTA-AKKMFHEMIESGTTV 667
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+I + V+ LCR A LL K+ + FN VISA K G A E+
Sbjct: 668 SIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELF 727
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
+ + GL P++ TY+ +++ EEA
Sbjct: 728 DAISTYGLVPNIQTYSMMITNLIKEESYEEA 758
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 145/337 (43%), Gaps = 19/337 (5%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
+ + LL +C E L D + E+G K T+ LN L+ GK A +
Sbjct: 160 IFNTLLNGLCLECRVSEALELVDRMVEMGHKP----TLITLNTLVNGLCLNGKVSDAVVL 215
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
++ + G N+ TY + + + A + KM E D+ K II CK
Sbjct: 216 IDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKY 336
G A ++ K LI C D+ KL DM+ K
Sbjct: 276 DGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI--------KR 327
Query: 337 AIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
I P FS +I S + + A LL +M+ G P +NS+I + K + A
Sbjct: 328 KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEA 387
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
++M+ LM S+G PD+ T+ L++GY ++++ E+ E + VTY+TL++G
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 447
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+C+ + + A KL EM V+P++ Y L+ LC
Sbjct: 448 FCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLC 484
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 139/278 (50%), Gaps = 6/278 (2%)
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM-Y 299
A+++ K ++ ++C++M G + +I+ FC+ K ++ T+ + K+ Y
Sbjct: 97 AIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKL--SYAFSTMGKIMKLGY 154
Query: 300 PPQSVV-AFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
P +V+ L++ LC E V AL+++D K + ++++ LC V A
Sbjct: 155 EPDTVIFNTLLNGLCLECR-VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAV 213
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
L+ +M+ G P + V++ K+G AME+L+ M R +K D Y+ ++ G
Sbjct: 214 VLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G ++ A + NE + + +TY+TLI G+C +D KLL +M + PNV
Sbjct: 274 CKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNV 333
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++ LI S +K R A++LL++M +G+ N IT
Sbjct: 334 VTFSVLIDSF-VKEGKLREADQLLKEMMQRGIAPNTIT 370
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 143/334 (42%), Gaps = 5/334 (1%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
K G AF +FN+ G A+ TY I +D + MI+ P+
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
+I F K GK +EA + ++ + P LI C+E+ ++ A+ M+
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR-LEEAIQMV 391
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
D + I F+ +I C+ + L +M G +N+++ + ++
Sbjct: 392 DLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQS 451
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
G + A ++ + M SR ++PD+ +Y L+ G + G++E+A EI + +K+ L Y
Sbjct: 452 GKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIY 511
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
+I G C + D A L + GV+ + YN +I LC K A+ L M
Sbjct: 512 MIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKD-SLSKADILFRKMT 570
Query: 507 LKGLHLNGIT-RALIRAVKELEEDAIENGEALVE 539
+G + +T LIRA L +D L+E
Sbjct: 571 EEGHAPDELTYNILIRA--HLGDDDATTAAELIE 602
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 110/258 (42%), Gaps = 39/258 (15%)
Query: 300 PPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGA 357
P +V+ F L S++ + + +L L + + ++I S +I CR + + A
Sbjct: 84 PLPTVIDFNRLFSAIAKTKQ-YELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYA 142
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
+ + K++ G P +FN++++ ++ A+E++ M G KP + T L++G
Sbjct: 143 FSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNG 202
Query: 418 YA-NG----------------------------------GQMEEACEILNEAKKNHSRLS 442
NG GQ A E+L + ++ + +L
Sbjct: 203 LCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLD 262
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
V Y +I G CK D A L NEM+ G + ++ YN LI C A W KLL
Sbjct: 263 AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC-NAGRWDDGAKLL 321
Query: 503 EDMRLKGLHLNGITRALI 520
DM + + N +T +++
Sbjct: 322 RDMIKRKISPNVVTFSVL 339
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 1/225 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+ N LI + K + E+F + G +AN TY ++ + + A + +
Sbjct: 403 IMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQ 462
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M+ PD ++ C G+ ++A ++ + KM + +I +C
Sbjct: 463 EMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNAS 522
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ V A D+ + K + ++ +I LCR + A L KM EG P +
Sbjct: 523 K-VDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTY 581
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG 421
N +I A+ D T A E+++ M+S G DV T +++ ++G
Sbjct: 582 NILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSG 626
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 1/160 (0%)
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A L MI P P FN + SA +K + + K M S+G+ +YT + +++
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
+ ++ A + + K V ++TL+ G C AL+L++ M ++G +P
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ N L+ LCL A L++ M G N +T
Sbjct: 192 TLITLNTLVNGLCLNG-KVSDAVVLIDRMVETGFQPNEVT 230
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 90/199 (45%), Gaps = 1/199 (0%)
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A+D+ D + F+ + ++ + K L +M S+G + +I+
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
+ + ++ A + + G +PD + L++G ++ EA E+++ + +
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+ +T +TL+ G C + A+ L++ M + G QPN Y ++ +C K+ A +L
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMC-KSGQTALAMEL 250
Query: 502 LEDMRLKGLHLNGITRALI 520
L M + + L+ + ++I
Sbjct: 251 LRKMEERNIKLDAVKYSII 269
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/329 (18%), Positives = 124/329 (37%), Gaps = 36/329 (10%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI F G+ ++ N T+ I++ + A + ++M++
Sbjct: 302 NTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQ 361
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P++ +I FCK + +EA + L K P LI+ C+ + +
Sbjct: 362 RGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR-ID 420
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
L++ + S ++++++ C+ + AK L +M+S P + ++
Sbjct: 421 DGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILL 480
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA----CEILNEAKK 436
G++ A+E+ + ++ D+ Y ++ G N ++++A C + + K
Sbjct: 481 DGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVK 540
Query: 437 NHSRLSPV-------------------------------TYHTLIRGYCKLEEFDCALKL 465
+R + TY+ LIR + ++ A +L
Sbjct: 541 LDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAEL 600
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
+ EMK G +V +I L LD
Sbjct: 601 IEEMKSSGFPADVSTVKMVINMLSSGELD 629
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 152/325 (46%), Gaps = 7/325 (2%)
Query: 203 LIALFSKLGKGKA---AFEVFNKFGD-YGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
LI L L K K A+++F+KF G +Y I L + AW + + M
Sbjct: 755 LIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDM 814
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
G PD+ +++ K GK E +Y ++ P +ISSL + +
Sbjct: 815 KNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNL 874
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
K ALD D + + + +I L ++ + A L +M G P A+FN
Sbjct: 875 DK-ALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNI 933
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I+ Y K GD A ++ K M + G++PD+ +YT L+ G+++EA NE K
Sbjct: 934 LINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTG 993
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
+ Y+ +I G K + + AL L NEM++ G+ P++ YN L+ +L L + A
Sbjct: 994 LDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGM-VEQA 1052
Query: 499 EKLLEDMRLKGLHLNGIT-RALIRA 522
+++ E+++L GL + T ALIR
Sbjct: 1053 KRMYEELQLAGLEPDVFTYNALIRG 1077
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 131/305 (42%), Gaps = 4/305 (1%)
Query: 181 WDIVKEIGEKEKGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI 239
WD+ K++ K G N L+A+ K GK FE++ + C + TY I
Sbjct: 808 WDLFKDM--KNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVI 865
Query: 240 EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
+L++ D A ++ + P G +I K G+ +EA ++ +
Sbjct: 866 SSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCK 925
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P ++ LI+ + +T + A + E + +K ++ ++ LC V A
Sbjct: 926 PNCAIFNILINGYGKIGDT-ETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALY 984
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
+++ S G P +N +I+ K+ M A+ + MR+RG+ PD+YTY LM
Sbjct: 985 YFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLG 1044
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
G +E+A + E + TY+ LIRGY E + A + M G PN+
Sbjct: 1045 LAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIG 1104
Query: 480 EYNKL 484
Y +L
Sbjct: 1105 TYAQL 1109
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 138/299 (46%), Gaps = 12/299 (4%)
Query: 194 VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWS 253
V+T IL +++ + A F+V K G + N TY I L R + A
Sbjct: 367 VVTFTILVDVLCKARDFDEAFATFDVMRK---QGILPNLHTYNTLICGLLRAGRIEDALK 423
Query: 254 VCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC 313
+ + M G P + I +F K G+ +A + + K + P + SL
Sbjct: 424 LLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSL- 482
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
E ++ A M F+G R+ + P ++ +++ ++ V A LLS+MI G
Sbjct: 483 AEMGRLREAKTM---FNG-LRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGC 538
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
P V NS+I + KAG + A +M M+ L P V TY L+SG G++++A E
Sbjct: 539 EPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIE 598
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ + ++++TL+ +CK +E + ALK+ ++M + +P+V YN +I L
Sbjct: 599 LFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGL 657
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 144/329 (43%), Gaps = 9/329 (2%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
L+ A+C++ + L+ +K G K V+ + +L++ F+ G E +++
Sbjct: 302 VLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDK----FNDFGDLDTFKEFWSQ 357
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + + T+ ++ L + + FD A++ + M + G LP+ +I + G+
Sbjct: 358 MEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGR 417
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
++A + + P I + ET K A++ + + I +
Sbjct: 418 IEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGK-AVETFEKMKAKGIVPNIVACN 476
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+ + SL M + AKT+ + + G P + +N ++ YSK G + A+ +L M
Sbjct: 477 ASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRN 536
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFD 460
G +PDV L+ G+++EA ++ + K +LSP VTY+TL+ G K
Sbjct: 537 GCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKD--MKLSPTVVTYNTLLSGLGKEGRVQ 594
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A++L M PN +N L+ C
Sbjct: 595 KAIELFESMIXKKCSPNTISFNTLLDCFC 623
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 156/358 (43%), Gaps = 6/358 (1%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+ KA+ G +++ + + +++ G VL N LI L + G A EV+ +
Sbjct: 162 TIFKALSIRGGLRQMTTVLNKMRKAG----FVLNAYSYNGLIHLLIQSGFCGEALEVYRR 217
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + +TY + AL +++ + + ++M + G P+ I + GK
Sbjct: 218 MVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGK 277
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
EA+ ++ ++ P LI +LC + ++ A ++ K +
Sbjct: 278 IDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQ-LENAKELFVKMKANGHKPDQVIYI 336
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+++ D+ K S+M ++G P F ++ KA D A +MR +
Sbjct: 337 TLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQ 396
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G+ P+++TY L+ G G++E+A ++L+ + + + TY T I + K E A
Sbjct: 397 GILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKA 456
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
++ +MK G+ PN+ N + SL + R A+ + +R GL + +T ++
Sbjct: 457 VETFEKMKAKGIVPNIVACNASLYSLA-EMGRLREAKTMFNGLRENGLAPDSVTYNMM 513
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 114/279 (40%), Gaps = 42/279 (15%)
Query: 190 KEKGVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
K KG++ + N + +++G+ + A +FN + G + TY ++ S+
Sbjct: 464 KAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQV 523
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
D A ++ +MI G PD V +I K G+ EA ++ ++ K+ P L
Sbjct: 524 DEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTL 583
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
+S L +E G +K AI+ F S+I C
Sbjct: 584 LSGLGKE---------------GRVQK-AIELFESMIXKKC------------------- 608
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P FN+++ + K ++ A++M M KPDV TY ++ G ++ A
Sbjct: 609 -SPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAF 667
Query: 429 EILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKL 465
++ KK+ + P VT TL+ G K + A+ +
Sbjct: 668 WFFHQLKKS---MHPDHVTICTLLPGLVKCGQIGDAISI 703
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 1/172 (0%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+ + ++ ++L + T+L+KM G +N +I ++G A+E+ +
Sbjct: 157 LDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYR 216
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M S GLKP + TY+ LM E +L E + R + T+ IR +
Sbjct: 217 RMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAG 276
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
+ D A ++ M D G P++ Y LI +LC A A++L M+ G
Sbjct: 277 KIDEAYEIFRRMDDEGCGPDLVTYTVLIDALC-NAGQLENAKELFVKMKANG 327
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 130/287 (45%), Gaps = 2/287 (0%)
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+ N+ D GC+ + T+ I AL + A + ++ G P+ +I+ C
Sbjct: 358 IVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALC 417
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
K G A ++ + P + LI +LC + K ALD+L + +
Sbjct: 418 KVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAK-ALDLLKEMEVSGCPQST 476
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
++++I LC+ + + A+ + +M G FN++I A + A E++
Sbjct: 477 VTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQ 536
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M S GL+P+ TY +++ Y G + +A +IL N + VTY TLI G CK
Sbjct: 537 MISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARR 596
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
ALKLL M+ G++P YN +IQSL + + R A L +M
Sbjct: 597 TQAALKLLRGMRMKGMKPTPKAYNPVIQSL-FRGNNGRDALSLFREM 642
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 163/353 (46%), Gaps = 9/353 (2%)
Query: 168 ICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFE-VFNKFGDY 226
I +G + L ++ +E + + ++ I +++L AF+ V N+ +
Sbjct: 96 IIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMF 155
Query: 227 GCVANQETYYFTIEAL---SRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
G AN E Y + L S+ K+ + A++ +M G PD +I C+ +A
Sbjct: 156 GVQANTEVYNHLLTVLAEGSKIKLLESAYT---EMSSQGIEPDVVTFNTVIDALCRARQA 212
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
+ A ++ + P ++ L+ +E +++ AL + S +
Sbjct: 213 RTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEG-SIEAALRLKARMSEMGCSPTSVTVNV 271
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
+I C++ V A + + I++G P F++ ++ + G + A+++L LM G
Sbjct: 272 LINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEG 331
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
+PDVYTY+ +++ N G++EEA I+N+ + T++TLI C + + AL
Sbjct: 332 CEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEAL 391
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
L E+ G+ PNV +N LI +LC K D A +L E+M+ G + +T
Sbjct: 392 DLARELTVKGLSPNVYTFNILINALC-KVGDPHLAVRLFEEMKSSGCTPDEVT 443
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 138/320 (43%), Gaps = 2/320 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V N +I + + + A + + ++ T+ +E + A +
Sbjct: 196 VVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKA 255
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M E G P S V +I+ +CK G+ +A P + + ++ LCQ
Sbjct: 256 RMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNG 315
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
V AL +L E + + +S+VI LC ++ AK ++++M+ G P F
Sbjct: 316 H-VDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTF 374
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N++I A + A+++ + + +GL P+VYT+ L++ G A + E K
Sbjct: 375 NTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKS 434
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ VTY+ LI C + AL LL EM+ G + YN +I LC K
Sbjct: 435 SGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLC-KRRRIE 493
Query: 497 TAEKLLEDMRLKGLHLNGIT 516
AE++ + M + G+ N IT
Sbjct: 494 EAEEVFDQMDVTGIGRNAIT 513
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 146/316 (46%), Gaps = 11/316 (3%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N LI + + A ++ + G N T+ I AL + A + E+M
Sbjct: 374 FNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMK 433
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP-PQSVVAF--LISSLCQED 316
+G PD +I C GK +A L +E ++ PQS V + +I LC+
Sbjct: 434 SSGCTPDEVTYNILIDNLCSSGKLAKA---LDLLKEMEVSGCPQSTVTYNTIIDGLCKR- 489
Query: 317 ETVKLALDMLD--DFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
++ A ++ D D +G R AI F+++I LC + + A L+ +MISEG P N
Sbjct: 490 RRIEEAEEVFDQMDVTGIGRN-AIT-FNTLIDGLCNAERIDDAAELVDQMISEGLQPNNV 547
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
+NS+++ Y K G+++ A ++L+ M + G + DV TY L++G + + A ++L
Sbjct: 548 TYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGM 607
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
+ + +P Y+ +I+ + AL L EM +VG P+ Y + + LC
Sbjct: 608 RMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGP 667
Query: 495 WRTAEKLLEDMRLKGL 510
+ A L +M G
Sbjct: 668 IKEAFDFLVEMADNGF 683
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 138/299 (46%), Gaps = 9/299 (3%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI LF++ G+ A E + ++G + + Y I R + A V ++M+ G
Sbjct: 305 LIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFG 364
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
LPD +++ CK + +A + +E+ + P LI C+ D ++ A
Sbjct: 365 CLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCR-DGNIEKA 423
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
L D S + + I ++++I +CR D+ A L M S P + ++ +I +
Sbjct: 424 LQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDS 483
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ + G + A L M ++G+ P++ TY ++ GY G + + + L K H ++
Sbjct: 484 HCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFL--PKMRHDKVM 541
Query: 443 P--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC----LKALDW 495
P +TY+TLI GY K + A LL M++ VQP+ YN +I ++ DW
Sbjct: 542 PDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADW 600
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 166/392 (42%), Gaps = 53/392 (13%)
Query: 156 VTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKG-- 213
V + ++ ++ + C ++ EV D V I E EK + +++ + + ++ G
Sbjct: 157 VNTYTLNIMVHSYCKTLQFGEV----DTV--ISEMEKRCVFPDVVTHNVMVDARFRAGDV 210
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
+AA + + G TY ++ L R +D A V M G PD +
Sbjct: 211 EAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNML 270
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEA 333
I FC+ G+ +EA Y R +++ P + LI + E +D ++ E
Sbjct: 271 IGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGE-----MDHAAEYLREM 325
Query: 334 RKYAIKP---------------------------------------FSSVIRSLCRMKDV 354
R++ + P +++++ LC+ + +
Sbjct: 326 REFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRL 385
Query: 355 HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
A+ LL++M G PP F ++I Y + G++ A++ + + L+PD+ TY L
Sbjct: 386 SDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTL 445
Query: 415 MSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV 474
+ G G + +A E+ ++ + VTY LI +C+ + D A L+EM + G+
Sbjct: 446 IDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGI 505
Query: 475 QPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
PN+ YN +I+ C ++ + ++ L MR
Sbjct: 506 VPNIMTYNSIIKGYC-RSGNVSKGQQFLPKMR 536
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 151/330 (45%), Gaps = 12/330 (3%)
Query: 184 VKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALS 243
++E G GV I +I F + G A V ++ +GC+ + TY + L
Sbjct: 325 MREFGLMPDGV----IYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLC 380
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS 303
+ + A + +M E G PD +I +C+ G ++A + ++++ P
Sbjct: 381 KERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIV 440
Query: 304 VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSK 363
LI +C++ + K A ++ DD +S +I S C V A L +
Sbjct: 441 TYNTLIDGMCRQGDLGK-ANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDE 499
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
M+++G P +NS+I Y ++G+++ + L MR + PD+ TY L+ GY G+
Sbjct: 500 MVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGK 559
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYC---KLEEFDCALKLLNEMKDVGVQPNVDE 480
M EA +L + + + VTY+ +I G+ ++E D K +M G++P+
Sbjct: 560 MHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYK---KMGARGIEPDRYT 616
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
Y +I + A + + + +L ++M KGL
Sbjct: 617 YMSMINGHVV-AGNSKKSFQLHDEMLQKGL 645
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 145/313 (46%), Gaps = 2/313 (0%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
++ + LI +++ K + AFE F D+ + ALSR
Sbjct: 90 QVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALSRAGWPHLTADAYRL 149
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
++ + S ++ + ++ +CK + E V + ++ ++P ++ + + +
Sbjct: 150 VLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGD 209
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
V+ A+ ++D + K + ++SV++ L R A+ + M + G P FN
Sbjct: 210 -VEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFN 268
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+I + +AG++ A+ K MR R + PDV +++ L+ + G+M+ A E L E ++
Sbjct: 269 MLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREF 328
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
V Y +I G+C+ AL++ +EM G P+V YN L+ LC K
Sbjct: 329 GLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLC-KERRLSD 387
Query: 498 AEKLLEDMRLKGL 510
AE+LL +M+ +G+
Sbjct: 388 AEELLNEMKERGV 400
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 83/207 (40%), Gaps = 1/207 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI + G A E+++ N TY I++ + D A++ ++M+
Sbjct: 443 NTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVN 502
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G +P+ II +C+ G + R K+ P LI +E + +
Sbjct: 503 KGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGK-MH 561
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A ++L E + ++ +I ++ A + KM + G P + S+I
Sbjct: 562 EAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMI 621
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPD 407
+ + AG+ + ++ M +GL PD
Sbjct: 622 NGHVVAGNSKKSFQLHDEMLQKGLAPD 648
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 75/167 (44%), Gaps = 6/167 (3%)
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
++S +++ P P VF+ +I Y+++ A E +L+ + L++ +
Sbjct: 76 IVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALS 135
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
G + ++S ++ T + ++ YCK +F +++EM+ V P+V
Sbjct: 136 RAGWPHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVV 195
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH-----LNGITRALIR 521
+N ++ + +A D A L++ M KG+ N + + L+R
Sbjct: 196 THNVMVDAR-FRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLR 241
>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
Length = 607
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 154/349 (44%), Gaps = 41/349 (11%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGD--YGCVANQETYYFTIEALSRRKIFDWAWSV 254
+ ILN ++ K+G+ + A ++ +GC N TY +A R D A +
Sbjct: 203 IVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLADACCRVGDIDMACQI 262
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGK-----------------AKEAHVVYT------ 291
E+M + G P+ + I+ C+ G+ A+ V Y+
Sbjct: 263 VERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARGNAVTYSTLVSAF 322
Query: 292 -------LARE------KKMYPPQSVVAF-LISSLCQEDETVKLALDMLDDFSGEARKYA 337
LA E + YPP +V+ F +IS L Q V A ++ K
Sbjct: 323 LHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVD-ACNIAASMKKAGFKLD 381
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
K ++ +I CR K +H A L +M G P +N+++S KAGD + E+L
Sbjct: 382 RKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLG 441
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M G +P V T+ L+ GY G+ +EA +I + + + V Y+TLI CK
Sbjct: 442 NMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSR 501
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
E D A+KL +EM++ V NV YN L++ L K + + E L++ M+
Sbjct: 502 EVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFE-LMDQMK 549
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 96/195 (49%), Gaps = 8/195 (4%)
Query: 333 ARKYAIKPFSSVIRS--LCRMKDVHGAKTLLSKMISEGPP-PGNAVFNSVISAYSKAGDM 389
A ++ I P S+ + S L R A + L ++ G P P + FNS++SA +AG++
Sbjct: 88 AARHCIPPPSASLLSKLLARFSSPADAASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNL 147
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYH 447
E+ MR +KPD+ TY L++ G + +A ++L+ S + V +
Sbjct: 148 RGMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKVLDRMSSPGSDVCADIVILN 207
Query: 448 TLIRGYCKLEEFDCALKLLNE-MKDV-GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
T++ G CK+ A+ ++E M+ V G PN YN L + C + D A +++E M
Sbjct: 208 TVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLADA-CCRVGDIDMACQIVERM 266
Query: 506 RLKGLHLNGITRALI 520
+G+ N IT I
Sbjct: 267 EKEGVTPNVITMNTI 281
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 153/312 (49%), Gaps = 3/312 (0%)
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
+A F+ G N TY + AL R A SV M G P++ ++
Sbjct: 140 SARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLV 199
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR 334
+ FC+ G+ A + + RE + P +++ +C+ ++ A + D+ E
Sbjct: 200 AAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGR-MEDARKVFDEMVKEGL 258
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
+++++ C++ H A ++ ++M +G P F S+I KAG++ A+
Sbjct: 259 APDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVG 318
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+++ MR RGL+ + T+T L+ G+ G +++A + E ++ + S V Y+ LI GYC
Sbjct: 319 LVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYC 378
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG 514
+ D A +L+ EM+ GV+P+V Y+ ++ + C K D +A +L + M G+ +
Sbjct: 379 MVGRMDEARELVREMEAKGVKPDVVTYSTILSAYC-KNGDTHSAFQLNQQMLENGVLPDA 437
Query: 515 IT-RALIRAVKE 525
IT +LIR + E
Sbjct: 438 ITYSSLIRVLCE 449
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 137/306 (44%), Gaps = 27/306 (8%)
Query: 243 SRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQ 302
S R+ FD M+ G P+ ++ C G KEA V R P
Sbjct: 140 SARRFFD-------SMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNA 192
Query: 303 SVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAK 358
L+++ C+ E +D + R+ +KP F+SV+ +C+ + A+
Sbjct: 193 VTYNTLVAAFCRAGE-----VDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDAR 247
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+ +M+ EG P +N+++ Y K G A+ + M +G+ PDV T+T L+
Sbjct: 248 KVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVM 307
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G +E A ++ E ++ +++ +T+ LI G+CK D AL + EM+ +QP+V
Sbjct: 308 CKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSV 367
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI----------RAVKELEE 528
YN LI C+ A +L+ +M KG+ + +T + I + +L +
Sbjct: 368 VCYNALINGYCMVG-RMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQ 426
Query: 529 DAIENG 534
+ENG
Sbjct: 427 QMLENG 432
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 134/298 (44%), Gaps = 9/298 (3%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
V N L+ G K A V GC N TY + A R D A +
Sbjct: 156 NVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLV 215
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+ M E G P+ +++ CK G+ ++A V+ ++ + P L+ C+
Sbjct: 216 DMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCK- 274
Query: 316 DETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
V + + L F+ RK I P F+S+I +C+ ++ A L+ +M G
Sbjct: 275 ---VGCSHEALSVFAEMTRK-GIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQM 330
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
F ++I + K G + A+ ++ MR ++P V Y L++GY G+M+EA E++
Sbjct: 331 NEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELV 390
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
E + + VTY T++ YCK + A +L +M + GV P+ Y+ LI+ LC
Sbjct: 391 REMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLC 448
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 160/365 (43%), Gaps = 13/365 (3%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L++A+C +KE ++ ++ G V N L+A F + G+ A + +
Sbjct: 161 NILVRALCGRGHRKEALSVLRDMRGAGCDPNAV----TYNTLVAAFCRAGEVDRAERLVD 216
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ G N T+ + + + + A V ++M++ G PD ++ +CK G
Sbjct: 217 MMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVG 276
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ EA V+ K + P LI +C+ ++ A+ ++ + + F
Sbjct: 277 CSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAG-NLERAVGLVREMRERGLQMNEITF 335
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+++I C+ + A + +M P +N++I+ Y G M A E+++ M +
Sbjct: 336 TALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEA 395
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
+G+KPDV TY+ ++S Y G A ++ + +N +TY +LIR C+ +
Sbjct: 396 KGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGD 455
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLC--------LKALDWRTAEKLLEDMRLKGLHLN 513
A L M +G+QP+ Y LI C L D +L D+ + +N
Sbjct: 456 AHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLIN 515
Query: 514 GITRA 518
G++++
Sbjct: 516 GLSKS 520
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 115/218 (52%), Gaps = 2/218 (0%)
Query: 299 YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
Y P SV+A+ L D ++ A D + + ++ ++R+LC A
Sbjct: 119 YAP-SVLAYNAVLLALSDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEAL 177
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
++L M G P +N++++A+ +AG++ A ++ +MR GLKP++ T+ +++G
Sbjct: 178 SVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGI 237
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G+ME+A ++ +E K V+Y+TL+ GYCK+ AL + EM G+ P+V
Sbjct: 238 CKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDV 297
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ LI +C KA + A L+ +MR +GL +N IT
Sbjct: 298 VTFTSLIHVMC-KAGNLERAVGLVREMRERGLQMNEIT 334
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 164/372 (44%), Gaps = 28/372 (7%)
Query: 145 LGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWD-IVKEIGEKEKGVLTVEILNEL 203
L NLV F ++++ IC + ++ ++D +VKE G GV N L
Sbjct: 223 LKPNLVTF---------NSVVNGICKAGRMEDARKVFDEMVKE-GLAPDGV----SYNTL 268
Query: 204 IALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGS 263
+ + K+G A VF + G + + T+ I + + + A + +M E G
Sbjct: 269 VGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGL 328
Query: 264 LPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLC---QEDET 318
+ +I FCK G +A + R+ ++ P SVV + LI+ C + DE
Sbjct: 329 QMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQP--SVVCYNALINGYCMVGRMDEA 386
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+L +M + K + +S+++ + C+ D H A L +M+ G P ++S
Sbjct: 387 RELVREM----EAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSS 442
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I + + A + K M S GL+PD TYT L+ G+ G +E A + +E K
Sbjct: 443 LIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAG 502
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
VTY LI G K A +LL ++ P +Y+ L++ C + + ++
Sbjct: 503 VLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMR--CCRNAELKSV 560
Query: 499 EKLLEDMRLKGL 510
LL+ +KGL
Sbjct: 561 LALLKGFCMKGL 572
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 134/356 (37%), Gaps = 66/356 (18%)
Query: 191 EKGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
KG++ V LI + K G + A + + + G N+ T+ I+ ++ D
Sbjct: 290 RKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLD 349
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A +M + P +I+ +C G+ EA + K + P + ++
Sbjct: 350 DALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTIL 409
Query: 310 SSLCQEDET---VKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLS 362
S+ C+ +T +L ML++ + P +SS+IR LC K + A L
Sbjct: 410 SAYCKNGDTHSAFQLNQQMLEN--------GVLPDAITYSSLIRVLCEEKRLGDAHVLFK 461
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG 422
MIS G P + S+I + K G++ A+ + M G+ PDV TY+ L++G +
Sbjct: 462 NMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSA 521
Query: 423 QMEEA-------------------------CE------------------ILNEAKKNHS 439
+ +EA C ++NEA K +
Sbjct: 522 RTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQ 581
Query: 440 -------RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
L Y LI G+C+ AL +M G PN LI+ L
Sbjct: 582 SILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGL 637
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 149/319 (46%), Gaps = 12/319 (3%)
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH 287
C + TY I LS+ D A + E+M++ G P+ ++ FCK + + A
Sbjct: 40 CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENA- 98
Query: 288 VVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVI 345
++ L + P VV++ +I+ LC+ D+ V A ++D + + + +++
Sbjct: 99 -LWLLEQMVMRGCPPDVVSYTTVINGLCKLDQ-VDEACRVMDKMIQRGCQPNVITYGTLV 156
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG-L 404
CR+ D+ GA L+ KM G P +N+++ + A+++ K M G
Sbjct: 157 DGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSC 216
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
PDV+TY+ ++ G++++AC ++ + VTY +L+ G CK + D A
Sbjct: 217 PPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATA 276
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLC-LKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRA 522
LL M G PN+ YN +I C L +D A LLE+M G N +T L+ A
Sbjct: 277 LLQRMTRSGCSPNIVTYNTIIDGHCKLGRID--EAYHLLEEMVDGGCQPNVVTYTVLLDA 334
Query: 523 VKEL--EEDAIENGEALVE 539
+ EDAI E +VE
Sbjct: 335 FCKCGKAEDAIGLVEVMVE 353
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 149/332 (44%), Gaps = 12/332 (3%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N ++ F K + + A + + GC + +Y I L + D A V +KMI+
Sbjct: 83 NTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQ 142
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC---QEDE 317
G P+ G ++ FC+ G A + E+ P ++ LC + D
Sbjct: 143 RGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDS 202
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
++L +M + S + +S+++ SL + V A L+ M+S+G P ++
Sbjct: 203 ALQLFKEMEESGSCPPDVFT---YSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYS 259
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
S++ KAG + A +L+ M G P++ TY ++ G+ G+++EA +L E
Sbjct: 260 SLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDG 319
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
+ + VTY L+ +CK + + A+ L+ M + G PN+ YN L+ C K +
Sbjct: 320 GCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKD-EVER 378
Query: 498 AEKLLEDMRLKG-----LHLNGITRALIRAVK 524
A +LL M KG + N + L +A K
Sbjct: 379 ACQLLSSMIQKGCVPNVVSYNTVIAGLCKATK 410
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 138/293 (47%), Gaps = 10/293 (3%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +IA K K + + CV + T+ I+A+ + D A+ + + E
Sbjct: 399 NTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQE 458
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEA-HVVYTLAREKKMYPPQSVVAFLISSLCQE---D 316
+G P+ ++ CK + +A +++ + R++ P +I LC+ D
Sbjct: 459 SGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVD 518
Query: 317 ETVKLALDMLDD-FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
KL L ML D + + Y+I VI SLC+ + + A +L M+ G PG
Sbjct: 519 RAYKLFLQMLSDGLAPDDVTYSI-----VISSLCKWRFMDEANNVLELMLKNGFDPGAIT 573
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+ ++I + K G++ A+E+L+L+ S+G PDV T++ + + G++ +A E+L
Sbjct: 574 YGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETML 633
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ VTY+TL++G+C + A+ L M+ G +P+ Y L+ L
Sbjct: 634 RAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHL 686
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 147/354 (41%), Gaps = 19/354 (5%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
LL A C ++ L +++ E G V + N L+ +F K + + A ++ +
Sbjct: 330 VLLDAFCKCGKAEDAIGLVEVMVEKGY----VPNLFTYNSLLDMFCKKDEVERACQLLSS 385
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
GCV N +Y I L + + E+M+ +PD II CK +
Sbjct: 386 MIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYR 445
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIK 339
A+ ++ L +E P L+ LC+ D+ L +M RK
Sbjct: 446 VDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREM-------TRKQGCS 498
Query: 340 P----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
P +++VI LC+ K V A L +M+S+G P + ++ VIS+ K M A +
Sbjct: 499 PDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNV 558
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
L+LM G P TY L+ G+ G +++A EIL S VT+ I K
Sbjct: 559 LELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSK 618
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
A +LL M G+ P+ YN L++ C A A L E MR G
Sbjct: 619 RGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFC-DASRTEDAVDLFEVMRQCG 671
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 188/445 (42%), Gaps = 46/445 (10%)
Query: 102 DKLENVLSLLQSSVDGYLESSLDSFELDLHEDFVLKVLETPLVLGENLVCFFKWVTSGVV 161
D+L++ + LL+ VD ++ S+ LH +E L L E +V + VV
Sbjct: 58 DRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMV--MRGCPPDVV 115
Query: 162 D--ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
++ +C E + D + + G + V+T L+ F ++G A E+
Sbjct: 116 SYTTVINGLCKLDQVDEACRVMDKMIQRG-CQPNVIT---YGTLVDGFCRVGDLDGAVEL 171
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLP-DSEKVGKIISWFC 278
K + G N TY + L + D A + ++M E+GS P D I+
Sbjct: 172 VRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLV 231
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
K GK +A + K P + L+ LC+ + + A +L + I
Sbjct: 232 KSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGK-LDEATALLQRMTRSGCSPNI 290
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
++++I C++ + A LL +M+ G P + ++ A+ K G A+ ++++
Sbjct: 291 VTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEV 350
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK--- 455
M +G P+++TY L+ + ++E AC++L+ + + V+Y+T+I G CK
Sbjct: 351 MVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATK 410
Query: 456 -------LEEF-------------------------DCALKLLNEMKDVGVQPNVDEYNK 483
LE+ D A +L N +++ G PN+ YN
Sbjct: 411 VHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNS 470
Query: 484 LIQSLCLKALDWRTAEKLLEDMRLK 508
L+ LC K+ + AE LL +M K
Sbjct: 471 LVHGLC-KSRRFDQAEYLLREMTRK 494
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 123/250 (49%), Gaps = 14/250 (5%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVV-AFLISSLCQED---ETVKLALDMLDD 328
I+ C G+ +A V K PP SV +I+ L + D + ++L +M+D+
Sbjct: 16 ILRGLCDAGQCSDA--VLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDN 73
Query: 329 -FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG 387
F+ Y ++V+ C+ V A LL +M+ G PP + +VI+ K
Sbjct: 74 GFAPNVFSY-----NTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLD 128
Query: 388 DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYH 447
+ A ++ M RG +P+V TY L+ G+ G ++ A E++ + + R + +TY+
Sbjct: 129 QVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYN 188
Query: 448 TLIRGYCKLEEFDCALKLLNEMKDVG-VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
++ G C + D AL+L EM++ G P+V Y+ ++ SL +K+ A +L+E M
Sbjct: 189 NIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSL-VKSGKVDDACRLVEAMV 247
Query: 507 LKGLHLNGIT 516
KG N +T
Sbjct: 248 SKGCSPNVVT 257
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M +GLK + ++ G + GQ +A E K S VTY+T+I G K +
Sbjct: 1 MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDS-VTYNTMINGLSKSDR 59
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
D A++LL EM D G PNV YN ++ C KA A LLE M ++G
Sbjct: 60 LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFC-KANRVENALWLLEQMVMRG 109
>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
Length = 864
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 123/272 (45%)
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
+FN G N+ + I A +R + D A + E M G +PD+ +IS
Sbjct: 388 NIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSL 447
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
C+ G+ +A + + + P ++V LI C E VK + + + +
Sbjct: 448 CRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPG 507
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+K FSS+I +LC+ V K ++ M+ G P FNS++ Y G+M A +L
Sbjct: 508 VKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLD 567
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M S G++P+ Y Y L+ GY G++++A + + + + V Y ++ G +
Sbjct: 568 AMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQAR 627
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A K+ +EM + G ++ Y ++ LC
Sbjct: 628 RTTAAKKMFHEMIESGTTVSIHTYGVVLGGLC 659
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 150/326 (46%), Gaps = 15/326 (4%)
Query: 191 EKGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
E+GVL + I N +I K+ + A + K D G + TY I+ L + K D
Sbjct: 218 EQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMD 277
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A V E+M+E G+ P+S +I + G E+ V+ + P I
Sbjct: 278 KAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFI 337
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR-----MKDVHGAKTLLSKM 364
+L + T + A + D + K I +S+++ + DVH + + M
Sbjct: 338 HALFKHGRTNE-AKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVH---NIFNLM 393
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
+++G P VFN +I+AY++ G M AM + + M+++G+ PD T+ ++S G++
Sbjct: 394 LTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRL 453
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV-QPNVDEYNK 483
++A N S Y LI+G C E A +L++EM + + P V ++
Sbjct: 454 DDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSS 513
Query: 484 LIQSLCLKALDWRTAE-KLLEDMRLK 508
+I +LC + R AE K + DM ++
Sbjct: 514 IINNLCKEG---RVAEGKDIMDMMVQ 536
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 138/318 (43%), Gaps = 10/318 (3%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F K G+ A +F + + G + I+ L + K D A S+ +KM+++G
Sbjct: 196 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 255
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETV 319
PD II CK +A V E P LI +E+V
Sbjct: 256 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 315
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
++ M S + +S I +L + + AK + M+ +GP P ++++
Sbjct: 316 RVFKQM----SSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTM 371
Query: 380 ISAYSKAGD--MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+ Y+ A D + + LM ++G+ P+ + + L++ YA G M++A I + +
Sbjct: 372 LHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK 431
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
VT+ T+I C++ D AL N M D+GV P+ Y LIQ C +
Sbjct: 432 GMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHG-ELVK 490
Query: 498 AEKLLEDMRLKGLHLNGI 515
A++L+ +M K + G+
Sbjct: 491 AKELISEMMNKDIPPPGV 508
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 134/315 (42%), Gaps = 17/315 (5%)
Query: 216 AFEVFNKFGDYGCVANQ----ETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVG 271
A E+F + + C + TY I+ R D ++ ++++ G PD
Sbjct: 136 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY- 194
Query: 272 KIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSG 331
+I F K G+ +AH ++ E+ + P + +I LC+ E +D +
Sbjct: 195 SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKE-----MDKAESIVQ 249
Query: 332 EARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG 387
+ I P +S +I LC+ K + A+ +L +M+ G P + +NS+I YS +G
Sbjct: 250 KMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISG 309
Query: 388 DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYH 447
++ + K M S G+ P V + G+ EA I + + ++Y
Sbjct: 310 MWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYS 369
Query: 448 TLIRGYCKLEEFDCA--LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
T++ GY + A + N M G+ PN +N LI + + A + EDM
Sbjct: 370 TMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGM-MDKAMLIFEDM 428
Query: 506 RLKGLHLNGITRALI 520
+ KG+ + +T A +
Sbjct: 429 QNKGMIPDTVTFATV 443
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 109/271 (40%), Gaps = 4/271 (1%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA 216
+ V L++ C+ E+ +++ E+ K+ V+ + +I K G+
Sbjct: 471 SEAVYGCLIQGCCN---HGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEG 527
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
++ + G N T+ +E + A+++ + M G P+ G ++
Sbjct: 528 KDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDG 587
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
+CK G+ +A V+ K + P + + ++ L Q T A M +
Sbjct: 588 YCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTA-AKKMFHEMIESGTTV 646
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+I + V+ LCR A LL K+ + FN VISA K G A E+
Sbjct: 647 SIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELF 706
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
+ + GL P++ TY+ +++ EEA
Sbjct: 707 DAISTYGLVPNIQTYSMMITNLIKEESYEEA 737
>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Brachypodium distachyon]
Length = 676
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 156/331 (47%), Gaps = 16/331 (4%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
E + ++A F++ G+ A ++ + +G ET + + A F +A V +
Sbjct: 115 EAMRRMVAAFAEAGRLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDG 174
Query: 258 MIETGSL-PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE- 315
M+ G L PD+ +I C+ G+ +E + T+ + + + ++ CQ+
Sbjct: 175 MVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKG 234
Query: 316 -----DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
E + L+M + +++ I LC+ V A +L +M+++G
Sbjct: 235 RFRDVSELFRRMLEM-------GTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLK 287
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEM-LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
P S+I+ K G A + LKL++S KP+V+TYT ++ GY G++ A
Sbjct: 288 PNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEM 347
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+L + + TY TLI G+CK F+CA +L+N+M+ G QPN+ YN LI LC
Sbjct: 348 LLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLC 407
Query: 490 LKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
K + A K+L +GL L+ +T ++
Sbjct: 408 KKG-KIQEAYKVLRMANNQGLQLDKVTYTVM 437
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 135/327 (41%), Gaps = 39/327 (11%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+ C +EV AL +++ G L ++ +F + G+ + E+F +
Sbjct: 190 ALIVGCCRDGRMEEVDALLTVMQGQG----FCLDNATCTVIVRVFCQKGRFRDVSELFRR 245
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ G N Y I+ L +R A+ V E+M+ G P+ +I+ CK G
Sbjct: 246 MLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGW 305
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+ A ++ + Y P + ++
Sbjct: 306 TERAFRLFLKLIKSSSYKPN-----------------------------------VHTYT 330
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+I C+ + A+ LL +M+ +G P + ++IS + K G A E++ MR
Sbjct: 331 VMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRRE 390
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G +P++YTY L+ G G+++EA ++L A +L VTY +I +CK A
Sbjct: 391 GFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYA 450
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLC 489
L L N M + G P++ Y LI C
Sbjct: 451 LDLFNRMAENGCHPDIHTYTTLIARYC 477
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 94/240 (39%), Gaps = 45/240 (18%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIG-EKEKGVLTVEILNELIALFSKLGKGKAAFEVF 220
+AL+ +C +E Y + + G + +K TV +I K G A ++F
Sbjct: 400 NALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTV-----MITEHCKQGHITYALDLF 454
Query: 221 NKFGDYGCVANQETYYFTIEALSRR-------KIFD------------------------ 249
N+ + GC + TY I ++ K+FD
Sbjct: 455 NRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKV 514
Query: 250 ----WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVV 305
A V E+M++ G DS G +IS CK + +EA +Y +K++ P +
Sbjct: 515 GKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVTP 574
Query: 306 AFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI 365
L C+ ++ V +A+ +LD + + + + ++R L + V A L K +
Sbjct: 575 VTLAFEYCRREKAV-VAVSILDRLDKRRKNHTV---NVLVRKLSAIGHVEDASLFLKKAL 630
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 165/357 (46%), Gaps = 6/357 (1%)
Query: 168 ICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYG 227
+ S V + + + + KE+ + GV V + +I K+GK + A +V +G
Sbjct: 201 LVSLVKEGRIGVVESVYKEMIRRRIGV-NVVTFDVVINGLCKVGKFQKAGDVVEDMKAWG 259
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH 287
+ TY I+ + A ++ ++M+ P+ +I FC+ A
Sbjct: 260 FSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAK 319
Query: 288 VVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRS 347
V+ + + + P LI+ LC + + AL + D SG K + ++++I
Sbjct: 320 KVFEEMQRQGLQPNVVTYNSLINGLCSNGK-LDEALGLQDKMSGMGLKPNVVTYNALING 378
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
C+ K + A+ +L + G P FN++I AY KAG M A + +M G+ P+
Sbjct: 379 FCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPN 438
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
V TY L+ G+ G ++EA ++ E + N + VTY+ L+ CK E A++LL+
Sbjct: 439 VSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLD 498
Query: 468 E---MKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIR 521
E M+ G + N+ YN LI+ C K A +LL +M KGL N T ++R
Sbjct: 499 EMTLMEKKGRRANIVTYNVLIKGFCNKG-KLEEANRLLNEMLEKGLIPNRTTYDILR 554
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 123/515 (23%), Positives = 207/515 (40%), Gaps = 60/515 (11%)
Query: 31 LNISRSLSKPSLYRSSRFLSESPAANPKDESSFSPETDFSSRSFGENEYAQMDPSADAVE 90
+N R P S+RF P+ +PK ++ +P + +S N + P+ +
Sbjct: 1 MNCLRLTQFPKRCLSTRF----PSLDPKLNNTKTPFSSPNSTYTTPNSHTFDTPTISQLI 56
Query: 91 SKEEEAYEIDGDKLENVLSLLQSSVDGYLESSLDSFELDLHEDFVLKVLETPLVLGENLV 150
+K+ + K N SLLQ F + D +L
Sbjct: 57 AKQHWSKLKTIVKETNPSSLLQHL-----------FNSEAQPDLIL-------------- 91
Query: 151 CFFKWVTS--GVVDA------LLKAICSSVGKKEVYALWDIVKEIGEKEK---------- 192
C+FKW G + LL + ++ ++ AL D +
Sbjct: 92 CYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVL 151
Query: 193 ---GVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
G I++ L+ + K G+ A E F++ GDYG + + + +L +
Sbjct: 152 GSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIG 211
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
SV ++MI + +I+ CK GK ++A V + P +I
Sbjct: 212 VVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTII 271
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMI 365
C+ + K D E I P F+ +I CR ++V AK + +M
Sbjct: 272 DGYCKAGKMFKA-----DALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQ 326
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
+G P +NS+I+ G + A+ + M GLKP+V TY L++G+ ++
Sbjct: 327 RQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLK 386
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
EA E+L++ K + +T++TLI Y K D A L + M D GV PNV YN LI
Sbjct: 387 EAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLI 446
Query: 486 QSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
C + + + A KL ++M GL + +T ++
Sbjct: 447 VGFCREG-NVKEARKLAKEMEGNGLKADLVTYNIL 480
>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
Length = 844
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 123/272 (45%)
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
+FN G N+ + I A +R + D A + E M G +PD+ +IS
Sbjct: 408 NIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSL 467
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
C+ G+ +A + + + P ++V LI C E VK + + + +
Sbjct: 468 CRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPG 527
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+K FSS+I +LC+ V K ++ M+ G P FNS++ Y G+M A +L
Sbjct: 528 VKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLD 587
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M S G++P+ Y Y L+ GY G++++A + + + + V Y ++ G +
Sbjct: 588 AMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQAR 647
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A K+ +EM + G ++ Y ++ LC
Sbjct: 648 RTTAAKKMFHEMIESGTTVSIHTYGVVLGGLC 679
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 150/326 (46%), Gaps = 15/326 (4%)
Query: 191 EKGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
E+GVL + I N +I K+ + A + K D G + TY I+ L + K D
Sbjct: 238 EQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMD 297
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A V E+M+E G+ P+S +I + G E+ V+ + P I
Sbjct: 298 KAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFI 357
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR-----MKDVHGAKTLLSKM 364
+L + T + A + D + K I +S+++ + DVH + + M
Sbjct: 358 HALFKHGRTNE-AKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVH---NIFNLM 413
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
+++G P VFN +I+AY++ G M AM + + M+++G+ PD T+ ++S G++
Sbjct: 414 LTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRL 473
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV-QPNVDEYNK 483
++A N S Y LI+G C E A +L++EM + + P V ++
Sbjct: 474 DDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSS 533
Query: 484 LIQSLCLKALDWRTAE-KLLEDMRLK 508
+I +LC + R AE K + DM ++
Sbjct: 534 IINNLCKEG---RVAEGKDIMDMMVQ 556
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 138/318 (43%), Gaps = 10/318 (3%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F K G+ A +F + + G + I+ L + K D A S+ +KM+++G
Sbjct: 216 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 275
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETV 319
PD II CK +A V E P LI +E+V
Sbjct: 276 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 335
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
++ M S + +S I +L + + AK + M+ +GP P ++++
Sbjct: 336 RVFKQM----SSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTM 391
Query: 380 ISAYSKAGD--MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+ Y+ A D + + LM ++G+ P+ + + L++ YA G M++A I + +
Sbjct: 392 LHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK 451
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
VT+ T+I C++ D AL N M D+GV P+ Y LIQ C +
Sbjct: 452 GMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHG-ELVK 510
Query: 498 AEKLLEDMRLKGLHLNGI 515
A++L+ +M K + G+
Sbjct: 511 AKELISEMMNKDIPPPGV 528
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 137/314 (43%), Gaps = 15/314 (4%)
Query: 216 AFEVFNKFGDYGCVANQ----ETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVG 271
A E+F + + C + TY I+ R D ++ ++++ G PD
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY- 214
Query: 272 KIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK---LALDMLDD 328
+I F K G+ +AH ++ E+ + P + +I LC+ E K + M+D
Sbjct: 215 SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVD- 273
Query: 329 FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD 388
SG A + +S +I LC+ K + A+ +L +M+ G P + +NS+I YS +G
Sbjct: 274 -SGIAPD--LFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGM 330
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHT 448
++ + K M S G+ P V + G+ EA I + + ++Y T
Sbjct: 331 WNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYST 390
Query: 449 LIRGYCKLEEFDCA--LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
++ GY + A + N M G+ PN +N LI + + A + EDM+
Sbjct: 391 MLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGM-MDKAMLIFEDMQ 449
Query: 507 LKGLHLNGITRALI 520
KG+ + +T A +
Sbjct: 450 NKGMIPDTVTFATV 463
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 109/271 (40%), Gaps = 4/271 (1%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA 216
+ V L++ C+ E+ +++ E+ K+ V+ + +I K G+
Sbjct: 491 SEAVYGCLIQGCCN---HGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEG 547
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
++ + G N T+ +E + A+++ + M G P+ G ++
Sbjct: 548 KDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDG 607
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
+CK G+ +A V+ K + P + + ++ L Q T A M +
Sbjct: 608 YCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTA-AKKMFHEMIESGTTV 666
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+I + V+ LCR A LL K+ + FN VISA K G A E+
Sbjct: 667 SIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELF 726
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
+ + GL P++ TY+ +++ EEA
Sbjct: 727 DAISTYGLVPNIQTYSMMITNLIKEESYEEA 757
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 152/310 (49%), Gaps = 6/310 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI+ K G+ + A +F+K + G V N TY I+ + + A+S ++M++ G
Sbjct: 325 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 384
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS--SLCQEDETVK 320
+P ++ G+ EA + R+K + P LI+ S C K
Sbjct: 385 IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCG---NAK 441
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A D+ ++ + + ++S+I L R + A L K++ +G P +FN+++
Sbjct: 442 KAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMV 501
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ G++ A +LK M + + PD T+ LM G G++EEA +L+E K+ +
Sbjct: 502 DGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIK 561
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
++Y+TLI GY + + A ++ +EM +G P + YN LI+ LC K + AE+
Sbjct: 562 PDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLC-KNQEGDLAEE 620
Query: 501 LLEDMRLKGL 510
LL++M KG+
Sbjct: 621 LLKEMVNKGI 630
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 151/326 (46%), Gaps = 5/326 (1%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L+ +C +E L+D + EIG V N LI + G + AF ++
Sbjct: 324 SLISGMCKEGRLEEASGLFDKMVEIGLVPNAV----TYNTLIDGYCNKGDLERAFSYRDE 379
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + + TY + AL A + ++M + G +PD+ +I+ + + G
Sbjct: 380 MVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGN 439
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
AK+A ++ K + P LI L + + +K A D+ + + + F+
Sbjct: 440 AKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNR-MKEADDLFEKILDQGVSPDVIMFN 498
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+++ C +V A LL +M + PP FN+++ + G + A +L M+ R
Sbjct: 499 AMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRR 558
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G+KPD +Y L+SGY G +++A + +E + +TY+ LI+ CK +E D A
Sbjct: 559 GIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLA 618
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSL 488
+LL EM + G+ P+ Y LI+ +
Sbjct: 619 EELLKEMVNKGISPDDSTYLSLIEGM 644
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 125/248 (50%), Gaps = 2/248 (0%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
++ C+ +A EA + + +EK + P ++S + + +++A + +
Sbjct: 185 LVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNR-MEMAWVLYAEMFRL 243
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
+ F+ ++ LC+ + A+ + M G P +N++I YS G++ A
Sbjct: 244 RISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGA 303
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
+L MR +G++PD YTY L+SG G++EEA + ++ + + VTY+TLI G
Sbjct: 304 RRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDG 363
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
YC + + A +EM G+ P+V YN L+ +L ++ A+ ++++MR KG+
Sbjct: 364 YCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEG-RMGEADDMIKEMRKKGIIP 422
Query: 513 NGITRALI 520
+ IT ++
Sbjct: 423 DAITYNIL 430
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 114/246 (46%), Gaps = 16/246 (6%)
Query: 182 DIVKEIGEKEKGVLTVEI-LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIE 240
D++KE+ ++KG++ I N LI +S+ G K AF++ N+ G TY I
Sbjct: 410 DMIKEM--RKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIY 467
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP 300
LSRR A + EK+++ G PD ++ C G + A ++ K + P
Sbjct: 468 VLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPP 527
Query: 301 PQSVVAFLISSLCQED--ETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDV 354
+ L+ C+E E ++ LD E ++ IKP ++++I R D+
Sbjct: 528 DEVTFNTLMQGRCREGKVEEARMLLD-------EMKRRGIKPDHISYNTLISGYGRRGDI 580
Query: 355 HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
A + +M+S G P +N++I K + A E+LK M ++G+ PD TY L
Sbjct: 581 KDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSL 640
Query: 415 MSGYAN 420
+ G N
Sbjct: 641 IEGMGN 646
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 138/354 (38%), Gaps = 41/354 (11%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA 216
+S V D L++ C E + + ++KE G K +E N++++LF KL + + A
Sbjct: 178 SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPK----IETCNDMLSLFLKLNRMEMA 233
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
+ ++ + + T+ + L + A M G P+ II
Sbjct: 234 WVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHG 293
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
+ G + A + R K + P LIS +C+E L++ SG
Sbjct: 294 YSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGR--------LEEASG----- 340
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
L KM+ G P +N++I Y GD+ A
Sbjct: 341 -----------------------LFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYR 377
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
M +G+ P V TY L+ G+M EA +++ E +K +TY+ LI GY +
Sbjct: 378 DEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRC 437
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
A L NEM G++P Y LI L + + A+ L E + +G+
Sbjct: 438 GNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRN-RMKEADDLFEKILDQGV 490
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 78/176 (44%), Gaps = 1/176 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F ++R C ++ A M +G P N ++S + K M A + M
Sbjct: 182 FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMF 241
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+ VYT+ +++ G++++A E + + + + V+Y+T+I GY +
Sbjct: 242 RLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIE 301
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A ++L+ M+ G++P+ Y LI +C K A L + M GL N +T
Sbjct: 302 GARRILDAMRVKGIEPDSYTYGSLISGMC-KEGRLEEASGLFDKMVEIGLVPNAVT 356
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 171/371 (46%), Gaps = 40/371 (10%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVA-NQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N +IA F G+ +AA ++ + + G +A NQ TY I + D A V ++M+
Sbjct: 76 NTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEML 135
Query: 260 ETGSL-PDSEKVGKIISWFCKGGKAKEA-----------------------HVVYTLARE 295
G + P++ +I +C GK A H ++ R
Sbjct: 136 TKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRG 195
Query: 296 KKMY------------PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
+ Y P LI+ C+E VK AL++ ++ S + + ++S
Sbjct: 196 TEAYELVEEMGGKGLAPDVFTYNILINGHCKEG-NVKKALEIFENMSRRGVRATVVTYTS 254
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
+I +L + V L + + G P ++N++I+++S +G++ A E++ M +
Sbjct: 255 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 314
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
+ PD TY LM G G+++EA ++++E K + VTY+TLI GY + AL
Sbjct: 315 IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDAL 374
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITR-ALIRA 522
++ NEM + G P + YN LIQ LC K AE ++++M G+ + T +LI
Sbjct: 375 RIRNEMMNKGFNPTLLTYNALIQGLC-KNGQGDDAENMVKEMVENGITPDDSTYISLIEG 433
Query: 523 VKELEEDAIEN 533
+ +E AI++
Sbjct: 434 LTTEDERAIDD 444
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 93/174 (53%), Gaps = 11/174 (6%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F+ ++R LC A LL +M P P +N+VI+ + G + A+++++ MR
Sbjct: 44 FNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMREMR 99
Query: 401 SR-GLKPDVYTYTGLMSGYANGGQMEEACEILNEA-KKNHSRLSPVTYHTLIRGYCKLEE 458
R G+ P+ YTY ++SG+ G+++EA ++ +E K + V Y+ LI GYC +
Sbjct: 100 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 159
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE--KLLEDMRLKGL 510
D AL + M + GV V YN L+ +L +D R E +L+E+M KGL
Sbjct: 160 LDTALLYRDRMVERGVAMTVATYNLLVHALF---MDGRGTEAYELVEEMGGKGL 210
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 62/141 (43%), Gaps = 10/141 (7%)
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
P A + ++SA A PA + M L T+ ++ + G+ A E
Sbjct: 7 PISTASLHPLLSALPSA----PAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALE 62
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV-GVQPNVDEYNKLIQSL 488
+L + R + VTY+T+I G+C AL ++ EM++ G+ PN Y +I
Sbjct: 63 LL----RQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGW 118
Query: 489 CLKALDWRTAEKLLEDMRLKG 509
C K A K+ ++M KG
Sbjct: 119 C-KVGRVDEAVKVFDEMLTKG 138
>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
Length = 740
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 123/272 (45%)
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
+FN G N+ + I A +R + D A + E M G +PD+ +IS
Sbjct: 246 NIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSL 305
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
C+ G+ +A + + + P ++V LI C E VK + + + +
Sbjct: 306 CRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPG 365
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+K FSS+I +LC+ V K ++ M+ G P FNS++ Y G+M A +L
Sbjct: 366 VKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLD 425
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M S G++P+ Y Y L+ GY G++++A + + + + V Y ++ G +
Sbjct: 426 AMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQAR 485
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A K+ +EM + G ++ Y ++ LC
Sbjct: 486 RTTAAKKMFHEMIESGTTVSIHTYGVVLGGLC 517
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 151/327 (46%), Gaps = 17/327 (5%)
Query: 191 EKGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
E+GVL + I N +I K+ + A + K D G + TY I+ L + K D
Sbjct: 76 EQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMD 135
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A V E+M+E G+ P+S +I + G E+ V+ + P I
Sbjct: 136 KAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFI 195
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR-----MKDVHGAKTLLSKM 364
+L + T + A + D + K I +S+++ + DVH + + M
Sbjct: 196 HALFKHGRTNE-AKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVH---NIFNLM 251
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
+++G P VFN +I+AY++ G M AM + + M+++G+ PD T+ ++S G++
Sbjct: 252 LTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRL 311
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM--KDVGVQPNVDEYN 482
++A N S Y LI+G C E A +L++EM KD+ P V ++
Sbjct: 312 DDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIP-PPGVKYFS 370
Query: 483 KLIQSLCLKALDWRTAE-KLLEDMRLK 508
+I +LC + R AE K + DM ++
Sbjct: 371 SIINNLCKEG---RVAEGKDIMDMMVQ 394
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 138/318 (43%), Gaps = 10/318 (3%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F K G+ A +F + + G + I+ L + K D A S+ +KM+++G
Sbjct: 54 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 113
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETV 319
PD II CK +A V E P LI +E+V
Sbjct: 114 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 173
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
++ M S + +S I +L + + AK + M+ +GP P ++++
Sbjct: 174 RVFKQM----SSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTM 229
Query: 380 ISAYSKAGD--MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+ Y+ A D + + LM ++G+ P+ + + L++ YA G M++A I + +
Sbjct: 230 LHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK 289
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
VT+ T+I C++ D AL N M D+GV P+ Y LIQ C +
Sbjct: 290 GMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHG-ELVK 348
Query: 498 AEKLLEDMRLKGLHLNGI 515
A++L+ +M K + G+
Sbjct: 349 AKELISEMMNKDIPPPGV 366
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 126/294 (42%), Gaps = 13/294 (4%)
Query: 233 ETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTL 292
TY I+ R D ++ ++++ G PD +I F K G+ +AH ++
Sbjct: 15 HTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLE 73
Query: 293 AREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSL 348
E+ + P + +I LC+ E +D + + I P +S +I L
Sbjct: 74 MMEQGVLPKILICNSIIKELCKMKE-----MDKAESIVQKMVDSGIAPDLFTYSLIIDGL 128
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
C+ K + A+ +L +M+ G P + +NS+I YS +G ++ + K M S G+ P V
Sbjct: 129 CKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTV 188
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA--LKLL 466
+ G+ EA I + + ++Y T++ GY + A +
Sbjct: 189 DNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIF 248
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
N M G+ PN +N LI + + A + EDM+ KG+ + +T A +
Sbjct: 249 NLMLTKGIAPNKHVFNILINAYARCGM-MDKAMLIFEDMQNKGMIPDTVTFATV 301
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 109/271 (40%), Gaps = 4/271 (1%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA 216
+ V L++ C+ E+ +++ E+ K+ V+ + +I K G+
Sbjct: 329 SEAVYGCLIQGCCN---HGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEG 385
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
++ + G N T+ +E + A+++ + M G P+ G ++
Sbjct: 386 KDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDG 445
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
+CK G+ +A V+ K + P + + ++ L Q T A M +
Sbjct: 446 YCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTA-AKKMFHEMIESGTTV 504
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+I + V+ LCR A LL K+ + FN VISA K G A E+
Sbjct: 505 SIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELF 564
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
+ + GL P++ TY+ +++ EEA
Sbjct: 565 DAISTYGLVPNIQTYSMMITNLIKEESYEEA 595
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 77/148 (52%), Gaps = 4/148 (2%)
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
PP +N +I Y + + ++ + GL PD ++Y+ L+ G+ G++++A
Sbjct: 11 PPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHC 69
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ E + + +++I+ CK++E D A ++ +M D G+ P++ Y+ +I LC
Sbjct: 70 LFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLC 129
Query: 490 -LKALDWRTAEKLLEDMRLKGLHLNGIT 516
KA+D AE++LE M G N IT
Sbjct: 130 KSKAMD--KAERVLEQMVEAGTRPNSIT 155
>gi|357111163|ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Brachypodium distachyon]
Length = 821
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 152/319 (47%), Gaps = 6/319 (1%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
+I N LI ++ G+ + A + + ++ TY I A + A +C+K
Sbjct: 191 DIYNSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACGAAGNWKKALELCKK 250
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M G PD ++S F G + +A + + + + P + +I L ++ +
Sbjct: 251 MTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTFTLNIVIHCLVKDGQ 310
Query: 318 TVKLALDMLDDFSGEARKYA---IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
+ A+++L+ E R + ++S++ S V K + M++EG P
Sbjct: 311 YGE-AIELLNSMR-EKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIV 368
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
+N+++ AY+ G A+ + KL++ GL+PDV +YT L++ Y GQ E+A E E
Sbjct: 369 SYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEM 428
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
+KN R + V+Y+ LI Y F A+ LL+EM+ G+ P+V + L+ + C +
Sbjct: 429 RKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLTA-CGRCRQ 487
Query: 495 WRTAEKLLEDMRLKGLHLN 513
+ +LE + +G+ LN
Sbjct: 488 ITKIDTILEAAKSRGIKLN 506
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 153/351 (43%), Gaps = 20/351 (5%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ALL A S + ++ ++K+ G + V +LN + + G+ + A E F
Sbjct: 371 NALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNA----YGRSGQPEKAREAFK 426
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ C N +Y I+A +F A S+ +M + G PD + +++ G
Sbjct: 427 EMRKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLT---ACG 483
Query: 282 KAKEAHVVYTLAREKKMYPPQ-SVVAF---LISSLCQEDETVKL---ALDMLDDFSGEAR 334
+ ++ + T+ K + ++V + + S L D L A+ M + + +A
Sbjct: 484 RCRQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMMASNVNPDAV 543
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
Y I +I LC++ + M+ P V++S+I +Y K G +T A
Sbjct: 544 TYNI-----LISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQGKLTEAES 598
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
M+ G PDV TYT ++ Y + G A ++ E + N + + +L+
Sbjct: 599 TFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTVQPDAIICSSLMEALN 658
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
+ + + L+L+ MK+ + N Y ++I S C DW+TA +++E +
Sbjct: 659 RGSQHERVLQLMELMKEKCIPLNQKAYFEIIAS-CSMLRDWKTASEIIEHL 708
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 121/295 (41%), Gaps = 2/295 (0%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
GK + VF+ G N +Y + A + R + A + + + + G PD
Sbjct: 346 GKVEDCKAVFDMMVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSY 405
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
+++ + + G+ ++A + R+ P LI + K A+ +L +
Sbjct: 406 TTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAG-MFKEAISLLHEME 464
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
+ + S+++ + R + + T+L S G +NS I +Y GD
Sbjct: 465 KDGIPPDVVSISTLLTACGRCRQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYG 524
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A+E+ +M + + PD TY L+SG G+ E+ + + L+ Y +LI
Sbjct: 525 KALELYAVMMASNVNPDAVTYNILISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSSLI 584
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
Y K + A + MK+ G P+V Y +I++ WR A L ++M
Sbjct: 585 CSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDG-SWRNAWDLFKEM 638
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 126/290 (43%), Gaps = 3/290 (1%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGD--YGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
LN +I K G+ A E+ N + C + TY + + + +V +
Sbjct: 298 LNIVIHCLVKDGQYGEAIELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFDM 357
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M+ G P+ ++ + G +A ++ L ++ + P L+++ + +
Sbjct: 358 MVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQ 417
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
K A + + + + I ++++I + A +LL +M +G PP +
Sbjct: 418 PEK-AREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSIS 476
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
++++A + +T +L+ +SRG+K ++ Y + Y N G +A E+ +
Sbjct: 477 TLLTACGRCRQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMMAS 536
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
+ VTY+ LI G CK+ ++ +LK +M D+ + + Y+ LI S
Sbjct: 537 NVNPDAVTYNILISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSSLICS 586
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 75/168 (44%), Gaps = 1/168 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+ +IR R + A+ L +M P ++NS+I A+++AG A+ ++ M
Sbjct: 158 YGMMIRLHARHSQIDQARGLFFEMQEWRCKPDADIYNSLIHAHARAGQWRWAINIMDDML 217
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+ P TY +++ G ++A E+ + +N VT++ ++ + ++
Sbjct: 218 RAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTRNGVGPDLVTHNIVLSAFKNGSQYS 277
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLK 508
A+ MK + P+ N +I L +K + A +LL MR K
Sbjct: 278 KAIAYFEMMKGANIAPDTFTLNIVIHCL-VKDGQYGEAIELLNSMREK 324
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 58/297 (19%), Positives = 115/297 (38%), Gaps = 2/297 (0%)
Query: 190 KEKGV-LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
K +G+ L + N I + G A E++ + TY I L + +
Sbjct: 499 KSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMMASNVNPDAVTYNILISGLCKVGKY 558
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
+ E M++ E +I + K GK EA ++ +E P +
Sbjct: 559 AESLKFFEDMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAM 618
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
I + +D + + A D+ + G + SS++ +L R L+ M +
Sbjct: 619 IEAY-NDDGSWRNAWDLFKEMEGNTVQPDAIICSSLMEALNRGSQHERVLQLMELMKEKC 677
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P + +I++ S D A E+++ + S V T L++ G+ E
Sbjct: 678 IPLNQKAYFEIIASCSMLRDWKTASEIIEHLDSSLSSISVGTLNHLLTFLGKCGKTECMM 737
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
++ + + S + TY L+R + ++ +++L M+D GV P + Y ++
Sbjct: 738 KLFYKMMSSCSTVGVSTYTVLLRNLLAVGKWRKYIEVLQWMEDAGVSPTLYMYQNVL 794
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 68/157 (43%), Gaps = 1/157 (0%)
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS-EGPPPGNAVFNSVISAYSKAGDMTP 391
A ++A + F +IR + + A + M + E N ++ +I +++ +
Sbjct: 114 AGRFARRNFPLLIREITFAGSLQHAVHVFRWMKNQENYCARNDIYGMMIRLHARHSQIDQ 173
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
A + M+ KPD Y L+ +A GQ A I+++ + S TY+ +I
Sbjct: 174 ARGLFFEMQEWRCKPDADIYNSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVIN 233
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ AL+L +M GV P++ +N ++ +
Sbjct: 234 ACGAAGNWKKALELCKKMTRNGVGPDLVTHNIVLSAF 270
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 152/310 (49%), Gaps = 6/310 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI+ K G+ + A +F+K + G V N TY I+ + + A+S ++M++ G
Sbjct: 303 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 362
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS--SLCQEDETVK 320
+P ++ G+ EA + R+K + P LI+ S C K
Sbjct: 363 IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCG---NAK 419
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A D+ ++ + + ++S+I L R + A L K++ +G P +FN+++
Sbjct: 420 KAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMV 479
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ G++ A +LK M + + PD T+ LM G G++EEA +L+E K+ +
Sbjct: 480 DGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIK 539
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
++Y+TLI GY + + A ++ +EM +G P + YN LI+ LC K + AE+
Sbjct: 540 PDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLC-KNQEGDLAEE 598
Query: 501 LLEDMRLKGL 510
LL++M KG+
Sbjct: 599 LLKEMVNKGI 608
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 151/326 (46%), Gaps = 5/326 (1%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L+ +C +E L+D + EIG V N LI + G + AF ++
Sbjct: 302 SLISGMCKEGRLEEASGLFDKMVEIGLVPNAV----TYNTLIDGYCNKGDLERAFSYRDE 357
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + + TY + AL A + ++M + G +PD+ +I+ + + G
Sbjct: 358 MVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGN 417
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
AK+A ++ K + P LI L + + +K A D+ + + + F+
Sbjct: 418 AKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNR-MKEADDLFEKILDQGVSPDVIMFN 476
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+++ C +V A LL +M + PP FN+++ + G + A +L M+ R
Sbjct: 477 AMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRR 536
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G+KPD +Y L+SGY G +++A + +E + +TY+ LI+ CK +E D A
Sbjct: 537 GIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLA 596
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSL 488
+LL EM + G+ P+ Y LI+ +
Sbjct: 597 EELLKEMVNKGISPDDSTYLSLIEGM 622
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 123/243 (50%), Gaps = 2/243 (0%)
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
C+ +A EA + + +EK + P ++S + + +++A + +
Sbjct: 168 CELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNR-MEMAWVLYAEMFRLRISST 226
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+ F+ ++ LC+ + A+ + M G P +N++I YS G++ A +L
Sbjct: 227 VYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILD 286
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
MR +G++PD YTY L+SG G++EEA + ++ + + VTY+TLI GYC
Sbjct: 287 AMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKG 346
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITR 517
+ + A +EM G+ P+V YN L+ +L ++ A+ ++++MR KG+ + IT
Sbjct: 347 DLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEG-RMGEADDMIKEMRKKGIIPDAITY 405
Query: 518 ALI 520
++
Sbjct: 406 NIL 408
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 114/246 (46%), Gaps = 16/246 (6%)
Query: 182 DIVKEIGEKEKGVLTVEI-LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIE 240
D++KE+ ++KG++ I N LI +S+ G K AF++ N+ G TY I
Sbjct: 388 DMIKEM--RKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIY 445
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP 300
LSRR A + EK+++ G PD ++ C G + A ++ K + P
Sbjct: 446 VLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPP 505
Query: 301 PQSVVAFLISSLCQED--ETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDV 354
+ L+ C+E E ++ LD E ++ IKP ++++I R D+
Sbjct: 506 DEVTFNTLMQGRCREGKVEEARMLLD-------EMKRRGIKPDHISYNTLISGYGRRGDI 558
Query: 355 HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
A + +M+S G P +N++I K + A E+LK M ++G+ PD TY L
Sbjct: 559 KDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSL 618
Query: 415 MSGYAN 420
+ G N
Sbjct: 619 IEGMGN 624
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 138/354 (38%), Gaps = 41/354 (11%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA 216
+S V D L++ C E + + ++KE G K +E N++++LF KL + + A
Sbjct: 156 SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPK----IETCNDMLSLFLKLNRMEMA 211
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
+ ++ + + T+ + L + A M G P+ II
Sbjct: 212 WVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHG 271
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
+ G + A + R K + P LIS +C+E
Sbjct: 272 YSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEG-------------------- 311
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
R+++ G L KM+ G P +N++I Y GD+ A
Sbjct: 312 -------------RLEEASG---LFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYR 355
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
M +G+ P V TY L+ G+M EA +++ E +K +TY+ LI GY +
Sbjct: 356 DEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRC 415
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
A L NEM G++P Y LI L + + A+ L E + +G+
Sbjct: 416 GNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRN-RMKEADDLFEKILDQGV 468
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 78/176 (44%), Gaps = 1/176 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F ++R C ++ A M +G P N ++S + K M A + M
Sbjct: 160 FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMF 219
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+ VYT+ +++ G++++A E + + + + V+Y+T+I GY +
Sbjct: 220 RLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIE 279
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A ++L+ M+ G++P+ Y LI +C K A L + M GL N +T
Sbjct: 280 GARRILDAMRVKGIEPDSYTYGSLISGMC-KEGRLEEASGLFDKMVEIGLVPNAVT 334
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 155/347 (44%), Gaps = 7/347 (2%)
Query: 155 WVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGK 214
W +ALL +C+ + AL++ + + G V N L+ F K+G+
Sbjct: 7 WPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPD----VVTYNTLLHGFCKVGELD 62
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
A ++F+ G V + TY I + D A + ++M+ +PD ++
Sbjct: 63 EALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLV 122
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR 334
+ CK G+ EA + L +K P + LIS LC+E V AL + +
Sbjct: 123 NGLCKNGRVDEARM---LIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGY 179
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
+ + ++ +I L + V+ A L S ++ G P + I KAG + A+
Sbjct: 180 EPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALL 239
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
MLK M +G PDV ++ +++G +++EA +L+ + + ++++TLI G C
Sbjct: 240 MLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQC 299
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+ ++ A+ EM GV+P V YN L+ LC + R E +
Sbjct: 300 RAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAI 346
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 134/294 (45%), Gaps = 10/294 (3%)
Query: 226 YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKE 285
+G N+ TY + L A ++ E+MI+ G PD ++ FCK G+ E
Sbjct: 4 HGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDE 63
Query: 286 AHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVI 345
A ++ A ++ P LI+ C+ D+ + A +L E + ++S++
Sbjct: 64 ALKIFDGAVKRGFVPDVVTYNALINGFCKADK-LDEAQRILQRMVSENLVPDVVTYNSLV 122
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS---R 402
LC+ V A+ L+ + +G P ++++IS + ++ E LKL S +
Sbjct: 123 NGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCR--ELRGVSEALKLFGSVLKQ 177
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G +P+V TY L+ G ++ EA E+ + K+ +TY I G CK + A
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
L +L +M + G P+V +N +I LC K AE LL M KG N I+
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLC-KEKRVDEAEVLLSGMEAKGCSPNAIS 290
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
MR G P+ TY L+SG NGG+M +A + K VTY+TL+ G+CK+ E
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
D ALK+ + G P+V YN LI C KA A+++L+ M
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFC-KADKLDEAQRILQRM 106
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 50/117 (42%), Gaps = 7/117 (5%)
Query: 160 VVDALLKAICSSVGK-KEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFE 218
+VD L KA G+ KE L+D + E G V V + LI K GK A
Sbjct: 329 LVDGLCKA--RQEGRIKEAITLFDAMIEKGR----VPDVVTYSALIDGLGKAGKLDDARR 382
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
+ GC+ N TY I L + D A + M+E G +PD+ G IIS
Sbjct: 383 LLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIIS 439
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 130/278 (46%), Gaps = 6/278 (2%)
Query: 235 YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR 294
Y I A R A V ++ + G P+ G +I+ FCK G+ + A ++ +
Sbjct: 240 YTAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQ 299
Query: 295 EKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDV 354
+ + Q + +I C++ V AL + + + ++++ LCR+ +
Sbjct: 300 GRGVGHNQIIFNTMIDGYCRQG-MVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRM 358
Query: 355 HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
AKTLL MI +G PP + ++IS + K GDM A + + M +G P V TY +
Sbjct: 359 AEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVM 418
Query: 415 MSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV 474
M GY G + EA E +K TY +L+ G+C + D ALKL EMK G
Sbjct: 419 MDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGT 478
Query: 475 QPNVDEYNKLIQSLCLKALDWRTAE--KLLEDMRLKGL 510
+PNV Y LI L A + R+ E +L +DM GL
Sbjct: 479 EPNVVAYTALISGL---AKEGRSEEAFQLYDDMLKAGL 513
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 131/271 (48%), Gaps = 24/271 (8%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC-----------QEDETVKL 321
++ FCK G+ +A + P V +++LC ++D V+
Sbjct: 138 VVDGFCKSGRVDDARALL------DEMPRHGV---RLNALCYNSLLDCYVRRKDDARVQE 188
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
L+++++ EA + ++ ++ SL D+ + ++ +M ++ ++ +VI+
Sbjct: 189 LLEIMENGGIEA---TVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVIN 245
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
AY +AG++ A E+ G++P+ TY L++G+ GQME A +L + +
Sbjct: 246 AYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGH 305
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+ + ++T+I GYC+ D ALK+ M+ +G++ +V YN L LC + A+ L
Sbjct: 306 NQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLC-RVNRMAEAKTL 364
Query: 502 LEDMRLKGLHLNGITRALIRAVKELEEDAIE 532
L M KG+ N +T + ++ E D +E
Sbjct: 365 LHIMIEKGVPPNYVTYTTLISIHCKEGDMVE 395
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 422 GQMEEACEILNEAKKN-HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
GQ+ +A IL A + +SP+ ++ G+CK D A LL+EM GV+ N
Sbjct: 110 GQLADAAAILTRALGSCPGSVSPLAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALC 169
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
YN L+ + D R E LLE M G+
Sbjct: 170 YNSLLDCYVRRKDDARVQE-LLEIMENGGI 198
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 165/379 (43%), Gaps = 10/379 (2%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA 216
T+ ++ +C ++ +++I+ +G K V I LI + G+ + A
Sbjct: 445 TAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAV----IYTTLIKGHVQEGRFQEA 500
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
+ G + Y I L + + + A +MIE G P+ G +I
Sbjct: 501 VRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHG 560
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
+CK G+ + A + + P V LI C+E T + A + G +
Sbjct: 561 YCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTE-ATSIFRCMLGRSVHP 619
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
++ +S++I L R + GA LLS+ + +G P +NS+IS + K G + A ++
Sbjct: 620 DVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLH 679
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
+ M +G+ P++ TY L++G G++E A E+ + + VTY T+I GYCK
Sbjct: 680 EYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKS 739
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL----HL 512
A +L +EM GV P+ Y+ LI C K + A L + KG L
Sbjct: 740 GNLSKAFRLFDEMTLKGVPPDSFVYSALIDG-CRKEGNTEKALSLFLESVQKGFASTSSL 798
Query: 513 NGITRALIRAVKELEEDAI 531
N + ++ K +E + +
Sbjct: 799 NALMDGFCKSGKVIEANQL 817
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 177/410 (43%), Gaps = 24/410 (5%)
Query: 115 VDGYLESSLDSFELDLHEDFVLKVLETPLVLGENLVCFFKWVTSGVVDALLKAICSSVGK 174
+DGY + L D F L V+G L+C +G++ LLKA K
Sbjct: 173 IDGYKKKGL----FDEAVSFFLGAKRNGFVVG--LLC-----CNGLLSDLLKA-----NK 216
Query: 175 KEVYALWDIVKEIGEKEKGVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQE 233
E++ W G E VL V LI + G K + + + GC +
Sbjct: 217 LELF--WRFYN--GMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLV 272
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
TY I L R D A+ + + M + G + D +I F K + EA ++
Sbjct: 273 TYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEM 332
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
K + P LI ++ ++ + A + ++ K + ++++++ +C+ D
Sbjct: 333 FSKGLKPGHVAYTALIDGFMRQGDSGE-AFRVKEEMLARGVKLNLFTYNALVKGVCKFGD 391
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
+ A LL++MI G P +N++I Y K + + ++L M+ L P YT
Sbjct: 392 MEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGM 451
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
+++G G +E+A + + + V Y TLI+G+ + F A+++L M G
Sbjct: 452 IINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKG 511
Query: 474 VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITR-ALIRA 522
VQP+V YN +I LC K+ A+ L +M +GL N T ALI
Sbjct: 512 VQPDVLCYNSVIIGLC-KSRKMEEAKDYLVEMIERGLKPNVYTYGALIHG 560
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 140/324 (43%), Gaps = 4/324 (1%)
Query: 191 EKGVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
EKG++ V N +I+ F K G AF++ G N TY I L + +
Sbjct: 649 EKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIE 708
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A + + + G ++ II +CK G +A ++ K + PP S V +
Sbjct: 709 RARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGV-PPDSFVYSAL 767
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
C+++ + AL + + S + + ++++ C+ V A LL M+ +
Sbjct: 768 IDGCRKEGNTEKALSLFLE-SVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHV 826
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
P + + +I + K G + A + M+ R L P+ TYT L+SGY G+ E
Sbjct: 827 KPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFA 886
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ +E VT+ +I + K + LKL+++M G + + + LI LC
Sbjct: 887 LFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLC 946
Query: 490 LKALDWRTAEKLLEDMRLKGLHLN 513
K K+LE + +GL+L+
Sbjct: 947 RKE-HVSEVLKVLEKIEEQGLNLS 969
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 133/305 (43%), Gaps = 3/305 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI K G+ + A E+F+ G N TY I+ + A+ + ++M
Sbjct: 695 NALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTL 754
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PDS +I K G ++A ++ L +K + S + L+ C+ + ++
Sbjct: 755 KGVPPDSFVYSALIDGCRKEGNTEKALSLF-LESVQKGFASTSSLNALMDGFCKSGKVIE 813
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A +L+D + K ++ +I C+ + A+ M P + +++
Sbjct: 814 -ANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALL 872
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
S Y+ AG + + M ++ ++PD T++ ++ + G + +++++ K
Sbjct: 873 SGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGN 932
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+S H LI C+ E LK+L ++++ G+ ++ + L++ KA A +
Sbjct: 933 VSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCF-HKAGKMDGAAR 991
Query: 501 LLEDM 505
+L+ M
Sbjct: 992 VLKSM 996
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 96/243 (39%), Gaps = 1/243 (0%)
Query: 191 EKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDW 250
+KG + LN L+ F K GK A ++ D + TY I+ +
Sbjct: 789 QKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKE 848
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A M + +P++ ++S + G+ E ++ K + P + +I
Sbjct: 849 AEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMID 908
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
+ +E + VK L ++DD + + +I LCR + V +L K+ +G
Sbjct: 909 AHLKEGDHVK-TLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLN 967
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
A ++++ + KAG M A +LK M PD L++ + E A +
Sbjct: 968 LSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLINVEQDSTDSENAGDF 1027
Query: 431 LNE 433
L +
Sbjct: 1028 LKQ 1030
>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Cucumis sativus]
Length = 728
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 164/356 (46%), Gaps = 44/356 (12%)
Query: 194 VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRR-KIFDWAW 252
VLT ++N +I + +++ + A VF++ G + TY + I R + +
Sbjct: 206 VLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADR 265
Query: 253 SVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LIS 310
+CE M+E G + D+ + II+ FC+ A V+ + KM +++ + +IS
Sbjct: 266 WICE-MMERGFVVDNATLTLIITAFCEKSLVNRA--VWFFHKVTKMGLSPNLINYSSMIS 322
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRM------------------- 351
LC+ +VK A ++L++ K + +S+I LC+
Sbjct: 323 GLCKRG-SVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNY 381
Query: 352 -KDVHG----------------AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
+VH A+ L +M +G P + ++I + KAG+ + A E
Sbjct: 382 KPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYE 441
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+++LM + G P+ TY ++ G G+ EEA ++LN +N VTY LI C
Sbjct: 442 LMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQC 501
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
K + + AL LN+M VG QP++ Y LI + C + + + +EKL +++ GL
Sbjct: 502 KRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNM-MKDSEKLFDEVIKLGL 556
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 147/325 (45%), Gaps = 5/325 (1%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
E++ ++ +F+++GK K A ++ + G V I + ++ ++A +V ++
Sbjct: 175 EVVECMVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDE 234
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M G PDS II +C+ G EA E+ + + +I++ C E
Sbjct: 235 MSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFC-EKS 293
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
V A+ + + +SS+I LC+ V A LL +M+ G P
Sbjct: 294 LVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHT 353
Query: 378 SVISAYSKAGDMTPAMEM-LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
S+I K G A + LKL+RS KP+V+TYT ++SGY ++ A E+L E K
Sbjct: 354 SLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRA-EMLFERMK 412
Query: 437 NHSRLSPV-TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+ TY TLI G+CK F A +L+ M + G PN YN ++ LC +
Sbjct: 413 EQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRG-RA 471
Query: 496 RTAEKLLEDMRLKGLHLNGITRALI 520
A KLL + +G+T ++
Sbjct: 472 EEAFKLLNTGFQNQIEADGVTYTIL 496
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 142/319 (44%), Gaps = 3/319 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I+ K G K AFE+ + G N T+ I L ++ + A+ + K+I +
Sbjct: 320 MISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSD 379
Query: 263 SL-PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
+ P+ +IS +CK K A +++ +E+ + P + LI C+ K
Sbjct: 380 NYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSK- 438
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A ++++ S E ++S++ LC+ A LL+ + +IS
Sbjct: 439 AYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILIS 498
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
K DM A+ L M G +PD++ YT L++ + M+++ ++ +E K
Sbjct: 499 EQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAP 558
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+ TY ++I GYC+ ++ A+K +M D G P+ Y LI LC K A +L
Sbjct: 559 TKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLC-KESRLDEARQL 617
Query: 502 LEDMRLKGLHLNGITRALI 520
+ M KGL +TR +
Sbjct: 618 YDTMIDKGLSPCEVTRVTL 636
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 127/293 (43%), Gaps = 4/293 (1%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V +I+ + K K A +F + + G V N TY I+ + F A+ + E
Sbjct: 385 VHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELME 444
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
M G P++ I+ CK G+A+EA + + ++ LIS C+
Sbjct: 445 LMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRA 504
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ + AL L+ + I ++++I + CR + ++ L ++I G P +
Sbjct: 505 D-MNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETY 563
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
S+I Y + ++ A++ + M G PD +Y L+SG +++EA ++ +
Sbjct: 564 TSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMID 623
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
VT TL YCK E+F A+ +L + + + + LI+ LC
Sbjct: 624 KGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNK---KLWIRTVHTLIRKLC 673
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 4/171 (2%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+ + LIA F + K + ++F++ G +ETY I R K A +
Sbjct: 525 IHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQ 584
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
KM + G PDS G +IS CK + EA +Y +K + P + L C+ +
Sbjct: 585 KMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTE 644
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
+ A+ +L+ + +K I+ ++IR LC K V A K++ +
Sbjct: 645 DFAS-AMVILERLN---KKLWIRTVHTLIRKLCCEKKVALAALFFHKLLDK 691
>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 819
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 150/328 (45%), Gaps = 11/328 (3%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDY-GCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
+L L+ K GK A +++ + D G AN T + L R + + VC++
Sbjct: 453 LLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKE 512
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M+E G + D +I CK GK +EA + ++ P FL+ L + +
Sbjct: 513 MVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGK 572
Query: 318 TVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
+D + EA+ + + P ++ ++ C + A +L +K++
Sbjct: 573 -----MDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSY 627
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
V+N +I+A+SKAG+ T A ++ MRS + P ++TY+ ++ G +EEA I E
Sbjct: 628 VVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEE 687
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
+ + Y LI GYCKL + D +L EM +QPN Y +I C K
Sbjct: 688 MRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYC-KMG 746
Query: 494 DWRTAEKLLEDMRLKGLHLNGITRALIR 521
+ + A KLL +M G+ + +T +++
Sbjct: 747 NTKEATKLLNEMIANGISPDTVTYTVLQ 774
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 154/342 (45%), Gaps = 25/342 (7%)
Query: 186 EIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRR 245
E+GE+ G L + ++ L + F LG AF+ F F G + ++ F + +L +
Sbjct: 162 ELGERSHGELDL-LIYILCSQFQHLG-FHWAFDTFMLFTSKGVFPSLKSCNFLMSSLVKS 219
Query: 246 KIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVV 305
++ V + M G L D I+ +CKGGK EA ++ E + P
Sbjct: 220 NELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTY 279
Query: 306 AFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLL 361
LI LC+ + + F G + + P + ++ L + + A ++L
Sbjct: 280 NNLIDGLCKSGRLEEALM-----FKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVL 334
Query: 362 SKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG 421
+M S+G P VFN++I YS+ G+M A+ + M +GLKP+ T+ L+ G+
Sbjct: 335 VEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRT 394
Query: 422 GQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEY 481
QME+A ++L N ++ ++ CK +FD ALK++ + ++ N
Sbjct: 395 NQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLL 454
Query: 482 NKLIQSLC-----LKALD--WRTAEKLLEDMRLKGLHLNGIT 516
L+ LC L+A+D +R A+K KGL N T
Sbjct: 455 TLLVCGLCKCGKHLEAIDLWFRLADK-------KGLAANTTT 489
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 142/324 (43%), Gaps = 10/324 (3%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+L+ L+ + K G + A +V GD G + ++ L R + W + M
Sbjct: 177 VLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFM 236
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
G PD + CK A V+ R + + +IS LC+
Sbjct: 237 EGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSG-- 294
Query: 319 VKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
A++ F E Y + P + +++ LC+ + AK LL +M G P
Sbjct: 295 ---AVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVV 351
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
V+ +++ + K G A ++L M S G++P+ Y L+ G GQ+ A ++LNE
Sbjct: 352 VYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEM 411
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
K R TYH L++G+ + + D A +LLNEM++ G+ PN Y +I LC +
Sbjct: 412 IKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNG-E 470
Query: 495 WRTAEKLLEDMRLKGLHLNGITRA 518
+ A LLE+M +GL N A
Sbjct: 471 SKEAGNLLEEMISEGLKPNAFMYA 494
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 158/382 (41%), Gaps = 75/382 (19%)
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
AA +VF + C N+ TY I L R + A+ E+M++ G PD+ G ++
Sbjct: 263 AAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALM 322
Query: 275 SWFCKGGKAKEAH---------------VVYTLAREKKMYPPQSVVAF------------ 307
+ CKGG+ KEA VVY + M ++ AF
Sbjct: 323 NGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQ 382
Query: 308 --------LISSLC---QEDETVKLALDML------DDFS-------------------- 330
LI LC Q KL +M+ D F+
Sbjct: 383 PNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFEL 442
Query: 331 -GEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSK 385
E R I P + +I LC+ + A LL +MISEG P ++ +I +SK
Sbjct: 443 LNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSK 502
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
G ++ A E L+ M + PD++ Y L+ G + G++EEA E + +K T
Sbjct: 503 EGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFT 562
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
Y LI GYCK + A +LL +M + G++PN D Y L++ K+ D +L+ M
Sbjct: 563 YSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGY-FKSNDHEKVSSILQSM 621
Query: 506 RLKG----LHLNGIT-RALIRA 522
G H+ GI R L R+
Sbjct: 622 LGSGDKPDNHIYGIVIRNLSRS 643
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 132/283 (46%), Gaps = 2/283 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + K + A ++ + + G N +TY +E + + S+ + M+ +G
Sbjct: 566 LIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSG 625
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD+ G +I + + A +V T + + P + + LIS LC+ + K A
Sbjct: 626 DKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEK-A 684
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+ +LD+ + E + I ++++I CR D+ A+ + ++++G P + ++I
Sbjct: 685 VGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDG 744
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
K GD+T A ++ K M RG+ PD + Y L +G ++ +E+A L E N
Sbjct: 745 NCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQAL-FLTEEMFNRGYAH 803
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
+ TL+RG+CK KLL+ M D + PN +I
Sbjct: 804 VSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVI 846
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 139/305 (45%), Gaps = 3/305 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI S +G+ + A E + + G V ++ TY I + + + A + ++M+
Sbjct: 529 NSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLN 588
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
+G P+++ ++ + K ++ + P + +I +L + E ++
Sbjct: 589 SGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRS-ENME 647
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
+A +L + + +SS+I LC+M D+ A LL +M EG PG +N++I
Sbjct: 648 VAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALI 707
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ ++GD++ A + + ++GL P+ TYT L+ G G + +A ++ +
Sbjct: 708 DGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIA 767
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
Y+ L G + + AL L EM + G +V ++ L++ C + + EK
Sbjct: 768 PDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-HVSLFSTLVRGFCKRG-RLQETEK 825
Query: 501 LLEDM 505
LL M
Sbjct: 826 LLHVM 830
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 153/384 (39%), Gaps = 41/384 (10%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
D L++ +C L + + ++G + ++ + K G AFE+ N
Sbjct: 389 DNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDG----AFELLN 444
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG------------------- 262
+ + G + N TY I L + A ++ E+MI G
Sbjct: 445 EMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEG 504
Query: 263 -------SLPDSEKVGKIISWFC-----KG----GKAKEAHVVYTLAREKKMYPPQSVVA 306
SL + K + FC KG G+ +EA Y +++ + P + +
Sbjct: 505 HISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYS 564
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
LI C+ ++ A +L K ++ ++ + D ++L M+
Sbjct: 565 GLIHGYCKT-RNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLG 623
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
G P N ++ VI S++ +M A +L + GL PD++ Y+ L+SG ME+
Sbjct: 624 SGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEK 683
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A +L+E K V Y+ LI G+C+ + A + + + G+ PN Y LI
Sbjct: 684 AVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALID 743
Query: 487 SLCLKALDWRTAEKLLEDMRLKGL 510
C K D A L +DM +G+
Sbjct: 744 GNC-KNGDITDAFDLYKDMLDRGI 766
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 88/240 (36%), Gaps = 61/240 (25%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPP-------------------------GNAV 375
F+ + SLC A LL +MI P P AV
Sbjct: 118 FARLAASLCAASHFPQANGLLHQMILAHPHPPLVLASIQRAIQDSDARSPSPSPSHSTAV 177
Query: 376 FNSVISAYSKAGD---------------MTP----------------AMEML----KLMR 400
+ ++ Y K G + P AME++ M
Sbjct: 178 LDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFME 237
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G+ PDVYTY+ + + + A ++ E ++ ++ VTY+ +I G C+ +
Sbjct: 238 GAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVE 297
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
A EM D G+ P+ Y L+ LC K + A+ LL++M GL N + A +
Sbjct: 298 EAFGFKEEMVDYGLSPDAFTYGALMNGLC-KGGRLKEAKALLDEMSCSGLKPNVVVYATL 356
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 103/243 (42%), Gaps = 5/243 (2%)
Query: 189 EKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
EK V + I + LI+ K+ + A + ++ G Y I+ R
Sbjct: 657 EKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDI 716
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
A +V + ++ G LP+ +I CK G +A +Y ++ + P + V +
Sbjct: 717 SRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGI-APDAFVYNV 775
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYA-IKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
+++ C + ++ AL + ++ R YA + FS+++R C+ + + LL M+
Sbjct: 776 LATGCSDAADLEQALFLTEEMFN--RGYAHVSLFSTLVRGFCKRGRLQETEKLLHVMMDR 833
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEML-KLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
P +VI+ + KAG + A + +L + + + ++ L + N G +
Sbjct: 834 EIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKASQSSTDRFSLLFTDMINKGLIPP 893
Query: 427 ACE 429
C+
Sbjct: 894 KCD 896
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 143/316 (45%), Gaps = 2/316 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N ++ GK K A EV ++ C + TY IEA + A + ++M
Sbjct: 163 NTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRN 222
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
GS PD +I+ CK G+ EA P ++ S+C +
Sbjct: 223 KGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMD 282
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A +L D + ++ F+ +I LCR + A +L KM G P + +N ++
Sbjct: 283 -AEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLL 341
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ K M A+E L +M SRG PD+ TY L++ G+++ A EILN+
Sbjct: 342 HGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCS 401
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+TY+T+I G K+ + + A+KLL+EM+ G++P++ Y+ L+ L + A K
Sbjct: 402 PVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREG-KVDEAIK 460
Query: 501 LLEDMRLKGLHLNGIT 516
D+ G+ N IT
Sbjct: 461 FFHDLEGLGIRPNAIT 476
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 163/360 (45%), Gaps = 9/360 (2%)
Query: 151 CFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKL 210
C+ +T + L++A C G + L D ++ G K V N LI K
Sbjct: 190 CYPDVITYTI---LIEATCKESGVGQAMKLLDEMRNKGSKPD----VVTYNVLINGICKE 242
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ A + N YGC N T+ + ++ + A + M+ G P
Sbjct: 243 GRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTF 302
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
+I++ C+ G A + P L+ C+E + + A++ LD
Sbjct: 303 NILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDR-AIEYLDIMV 361
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
I +++++ +LC+ V A +L+++ S+G P +N+VI SK G
Sbjct: 362 SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTE 421
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A+++L MR +GLKPD+ TY+ L+SG + G+++EA + ++ + R + +TY++++
Sbjct: 422 RAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIM 481
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
G CK + D A+ L M +P Y LI+ + + L + A LL ++ +GL
Sbjct: 482 LGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGL-AKEALDLLNELCSRGL 540
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 160/357 (44%), Gaps = 15/357 (4%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L++ C +GK + A W V EI E+ V V N LI+ + K G+ A +V ++
Sbjct: 97 SLIRGFCR-IGKTK-KATW--VMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDR 152
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ TY + L A V ++ ++ PD +I CK
Sbjct: 153 MN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESG 209
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIK 339
+A + R K P LI+ +C+E DE +K L++ + +
Sbjct: 210 VGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKF----LNNMPSYGCQPNVI 265
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
+ ++RS+C A+ LLS M+ +G P FN +I+ + G + A+++L+ M
Sbjct: 266 THNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKM 325
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
G P+ +Y L+ G+ +M+ A E L+ VTY+TL+ CK +
Sbjct: 326 PMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 385
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
D A+++LN++ G P + YN +I L K A KLL++MR KGL + IT
Sbjct: 386 DVAVEILNQLSSKGCSPVLITYNTVIDGLS-KVGKTERAIKLLDEMRRKGLKPDIIT 441
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 133/278 (47%), Gaps = 5/278 (1%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
+ L R + + E M+ G +PD +I FC+ GK K+A V + +
Sbjct: 64 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123
Query: 299 YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
P LIS C+ E + AL +LD + + +++++R+LC + A
Sbjct: 124 VPDVITYNVLISGYCKSGE-IDNALQVLDRMNVAP---DVVTYNTILRTLCDSGKLKQAM 179
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+L + + + P + +I A K + AM++L MR++G KPDV TY L++G
Sbjct: 180 EVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGI 239
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G+++EA + LN + + +T++ ++R C + A KLL++M G P+V
Sbjct: 240 CKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSV 299
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+N LI LC + L R A +LE M + G N ++
Sbjct: 300 VTFNILINFLCRQGLLGR-AIDILEKMPMHGCTPNSLS 336
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 133/289 (46%), Gaps = 1/289 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI + K+G + +FN+ D GCV + TY I + + A+ +M
Sbjct: 328 NSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKN 387
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ +I FCK G + A ++ R + P + LI + C+ +
Sbjct: 388 NGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTE 447
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A +L+D K I +++++ LC+ + A+ + M+ +G P V+ +++
Sbjct: 448 -AWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALV 506
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
Y KA M AM++LK M +KPD+ Y ++ G+ + ++EE IL E K
Sbjct: 507 HGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGIS 566
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+PV T+I Y K + AL EM+DVGV+ + Y LI LC
Sbjct: 567 ANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLC 615
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 123/271 (45%), Gaps = 7/271 (2%)
Query: 246 KIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVV 305
IFD WS + + D + S F + G +EA+ ++ R + P
Sbjct: 203 NIFDMLWSTRNICVSGSGVFDV-----LFSVFVELGLLEEANECFSRMRNFRTLPKARSC 257
Query: 306 AFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI 365
FL+ L + +L +D G ++ ++ +I LC+ D+ ++ L +M
Sbjct: 258 NFLLHRLSKSGNG-QLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMR 316
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
G P +NS+I Y K G + + M+ G PD+ TY GL++ Y +M
Sbjct: 317 EMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMP 376
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
A E +E K N + + VTY TLI +CK A+KL +M+ G+ PN Y LI
Sbjct: 377 RAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLI 436
Query: 486 QSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ C KA + A KLL DM G+ LN +T
Sbjct: 437 DANC-KAGNLTEAWKLLNDMLQAGVKLNIVT 466
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 144/320 (45%), Gaps = 2/320 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+ SK G G+ + FN G + TY I+ L + + + + +M E
Sbjct: 258 NFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMRE 317
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD +I + K G +E ++ ++ P LI+ C+ ++ +
Sbjct: 318 MGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPR 377
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A + + K + +S++I + C+ + GA L M G P + S+I
Sbjct: 378 -AFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLI 436
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
A KAG++T A ++L M G+K ++ TYT L+ G G+M EA E+ K+
Sbjct: 437 DANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGIS 496
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+ Y L+ GY K E + A+K+L +M + ++P++ Y +I C + +
Sbjct: 497 PNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQR-KLEETKL 555
Query: 501 LLEDMRLKGLHLNGITRALI 520
+LE+M+ +G+ N + I
Sbjct: 556 ILEEMKSRGISANPVISTTI 575
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 132/314 (42%), Gaps = 5/314 (1%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L+ A C + E + L + + + G K V +L+ L K G+ A EVF
Sbjct: 434 SLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGL----CKAGRMIEAEEVFRS 489
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G NQ+ Y + + + + A + ++M E PD G II C K
Sbjct: 490 MLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRK 549
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+E ++ + + + + +I + + ++ AL+ + + I +
Sbjct: 550 LEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSD-ALNFFQEMQDVGVEATIVTYC 608
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+I LC+ V A +M+S G P AV+ S+I K + A ++ M+ R
Sbjct: 609 VLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCR 668
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G+ PD+ +T L+ G G ++EA +++ + Y +L+ G+ + E A
Sbjct: 669 GMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQA 728
Query: 463 LKLLNEMKDVGVQP 476
K NEM + G+ P
Sbjct: 729 RKFFNEMIEKGILP 742
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 134/343 (39%), Gaps = 37/343 (10%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F K G + A ++F G + N+ TY I+A + AW + M++ G
Sbjct: 400 LIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAG 459
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+ ++ CK G+ EA V+ + + P Q V L+ + E ++ A
Sbjct: 460 VKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKA-ERMEDA 518
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+ +L + K + + S+I C + + K +L +M S G + ++I A
Sbjct: 519 MKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDA 578
Query: 383 YSKAGDMTPAMEMLKLMR-----------------------------------SRGLKPD 407
Y KAG + A+ + M+ S GL+P+
Sbjct: 579 YFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPN 638
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
V YT L+ G +E A ++ +E + + LI G K AL L++
Sbjct: 639 VAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLIS 698
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
M ++ ++ ++ Y L+ + + A K +M KG+
Sbjct: 699 RMTELAIEFDLHVYTSLVSGFS-QCGELHQARKFFNEMIEKGI 740
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 148/307 (48%), Gaps = 13/307 (4%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRR----KIFDWAWSVCEKMIETGSLPDSEKVG 271
A ++F+K +YG + + ++ I LS KI A V + E G ++
Sbjct: 201 ARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKI---ALKVFVEFPEVGVCWNTASYN 257
Query: 272 KIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSG 331
I C+ G+ EAH + + P + +I+ CQ E ++ L ++++
Sbjct: 258 IITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGE-LQRVLKLIEEMQI 316
Query: 332 EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
+ K ++ VI LC+ V A+ +L +MISEG P ++ ++I + K G+++
Sbjct: 317 KGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSS 376
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTL 449
A + M+ R + PD TYT ++ G G++ EA ++ +E RL P VTY L
Sbjct: 377 AYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMV--CKRLEPDEVTYTAL 434
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
I GYCK + A L N+M +G+ PN+ Y L LC K + TA +LL +M KG
Sbjct: 435 IDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLC-KCGEVDTANELLHEMCRKG 493
Query: 510 LHLNGIT 516
L LN T
Sbjct: 494 LELNIYT 500
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 144/320 (45%), Gaps = 2/320 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I L K GK A V + G + Y I+ + A+ + ++M +
Sbjct: 327 NGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQK 386
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
PD +I C+ G+ EA ++ K++ P + LI C+E + +K
Sbjct: 387 RKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGK-MK 445
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A + + I ++++ LC+ +V A LL +M +G +NS++
Sbjct: 446 EAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLV 505
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ KAG++ A++++K M G PD TYT LM Y +M A E+L + +
Sbjct: 506 NGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQ 565
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+ VT++ L+ G+C + KLL M + G+ PN YN LI+ C++ + R +
Sbjct: 566 PTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRN-NMRATTE 624
Query: 501 LLEDMRLKGLHLNGITRALI 520
+ M KG+ +G T ++
Sbjct: 625 IYRGMCAKGVVPDGNTYNIL 644
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 133/303 (43%), Gaps = 10/303 (3%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
+LG+ A ++ + GC+ + +Y I + + E+M G P+
Sbjct: 263 LCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPN 322
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
+I CK GK EA V + + P + LI C+ V A +
Sbjct: 323 PYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLG-NVSSAYRLF 381
Query: 327 DDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
D E +K I P +++VI LC+ V A L +M+ + P + ++I
Sbjct: 382 D----EMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDG 437
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y K G M A + M GL P++ TYT L G G+++ A E+L+E + L+
Sbjct: 438 YCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELN 497
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
TY++L+ G CK D A+KL+ +M+ G P+ Y L+ + C K+ + A +LL
Sbjct: 498 IYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYC-KSREMVRAHELL 556
Query: 503 EDM 505
M
Sbjct: 557 RQM 559
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 7/334 (2%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
I LI F KLG +A+ +F++ + TY I L + A + +M
Sbjct: 360 IYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEM 419
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+ PD +I +CK GK KEA ++ + + P L LC+ E
Sbjct: 420 VCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGE- 478
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
V A ++L + + + I ++S++ LC+ ++ A L+ M G P + +
Sbjct: 479 VDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTT 538
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
++ AY K+ +M A E+L+ M R L+P V T+ LM+G+ G +E+ ++L +
Sbjct: 539 LMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKG 598
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
+ TY++LI+ YC ++ M GV P+ + YN LI+ C KA + + A
Sbjct: 599 IMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHC-KARNMKEA 657
Query: 499 EKLLEDMRLKGLHL-----NGITRALIRAVKELE 527
L DM KG +L N + + + K LE
Sbjct: 658 WFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLE 691
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 143/314 (45%), Gaps = 10/314 (3%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
+ ++G+ + ++ + G N TY I L + A V +MI G PD
Sbjct: 298 YCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPD 357
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
+I FCK G A+ ++ +++K+ P +I LCQ ++
Sbjct: 358 GVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVME-----A 412
Query: 327 DDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
D E ++P ++++I C+ + A +L ++M+ G P + ++
Sbjct: 413 DKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADG 472
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
K G++ A E+L M +GL+ ++YTY L++G G +++A +++ + +
Sbjct: 473 LCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPD 532
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
VTY TL+ YCK E A +LL +M D +QP V +N L+ C+ + EKLL
Sbjct: 533 AVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGM-LEDGEKLL 591
Query: 503 EDMRLKGLHLNGIT 516
+ M KG+ N T
Sbjct: 592 KWMLEKGIMPNATT 605
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 121/280 (43%), Gaps = 1/280 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + K GK K AF + N+ G N TY + L + D A + +M G
Sbjct: 434 LIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKG 493
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+ +++ CK G +A + +P L+ + C+ E V+ A
Sbjct: 494 LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVR-A 552
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++L + + F+ ++ C + + LL M+ +G P +NS+I
Sbjct: 553 HELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQ 612
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y +M E+ + M ++G+ PD TY L+ G+ M+EA + + L+
Sbjct: 613 YCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLT 672
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
+Y+ LI+G+ K ++F A +L +M+ G+ + + YN
Sbjct: 673 VSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYN 712
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 130/263 (49%), Gaps = 6/263 (2%)
Query: 229 VANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHV 288
V TY I L + + A+ + E+M+ +G +PD +I+ FCK K+ +A
Sbjct: 51 VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110
Query: 289 VYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDF--SGEARKYAIKPFSSVIR 346
V+ + P + LI LC+E +K A+D+ SG + ++S+I
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGLCKEGR-LKEAIDLFGRMIKSGSCMPNTVT-YNSLIS 168
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
CRM + A LL +M G P + ++++ + K + A ++L M +GL P
Sbjct: 169 GFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTP 228
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
+V T+T LM G ++ +A IL E ++ + TY+T++ GYC++ + + A K +
Sbjct: 229 NVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFM 288
Query: 467 NEMKDVGVQPNVDEYNKLIQSLC 489
++++ PNV +N +I+ LC
Sbjct: 289 --LEEMDCPPNVVSFNIMIRGLC 309
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 150/327 (45%), Gaps = 10/327 (3%)
Query: 194 VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWS 253
V T N LI+ K + A+++ + GC+ + TY I + K D A
Sbjct: 51 VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110
Query: 254 VCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY-TLAREKKMYPPQSVVAFLISSL 312
V E+++ G PD +I CK G+ KEA ++ + + P LIS
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 170
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
C+ + + A+++L+ + + +++++ C++ + A LL++M +G P
Sbjct: 171 CRMGK-MDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPN 229
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
F S++ + ++ A+ +L MR + P VYTY ++ GY Q+EEA + +
Sbjct: 230 VVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFML 289
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL-K 491
E + V+++ +IRG CK+ A++L+ E + P+V Y +I LC K
Sbjct: 290 EEMDCPPNV--VSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREK 347
Query: 492 ALD--WRTAEKLLEDMRLKGLHLNGIT 516
+D R K+LE+ G N IT
Sbjct: 348 KVDEACRVYRKMLEE---PGCLPNSIT 371
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 117/254 (46%), Gaps = 15/254 (5%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYG-CVANQETYYFTIEALSRRKIFDWAWSVCEKMIET 261
LI K G+ K A ++F + G C+ N TY I R D A ++ E+M ET
Sbjct: 130 LIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAET 189
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
GS PD +++ FCK + +A+ + K + P L+ LC+E+ +
Sbjct: 190 GSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENR-LSD 248
Query: 322 ALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV-F 376
A+ +L GE R+ + P +++++ CR+ + A+ M+ E P N V F
Sbjct: 249 AVHIL----GEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKF---MLEEMDCPPNVVSF 301
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N +I K + AME+++ R R PDV YT ++ +++EAC + + +
Sbjct: 302 NIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLE 361
Query: 437 NHSRL-SPVTYHTL 449
L + +TY T
Sbjct: 362 EPGCLPNSITYSTF 375
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 143/316 (45%), Gaps = 2/316 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N ++ GK K A EV ++ C + TY IEA + A + ++M
Sbjct: 220 NTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRN 279
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
GS PD +I+ CK G+ EA P ++ S+C +
Sbjct: 280 KGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMD 339
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A +L D + ++ F+ +I LCR + A +L KM G P + +N ++
Sbjct: 340 -AEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLL 398
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ K M A+E L +M SRG PD+ TY L++ G+++ A EILN+
Sbjct: 399 HGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCS 458
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+TY+T+I G K+ + + A+KLL+EM+ G++P++ Y+ L+ L + A K
Sbjct: 459 PVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREG-KVDEAIK 517
Query: 501 LLEDMRLKGLHLNGIT 516
D+ G+ N IT
Sbjct: 518 FFHDLEGLGIRPNAIT 533
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 163/360 (45%), Gaps = 9/360 (2%)
Query: 151 CFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKL 210
C+ +T + L++A C G + L D ++ G K V N LI K
Sbjct: 247 CYPDVITYTI---LIEATCKESGVGQAMKLLDEMRNKGSKPD----VVTYNVLINGICKE 299
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ A + N YGC N T+ + ++ + A + M+ G P
Sbjct: 300 GRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTF 359
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
+I++ C+ G A + P L+ C+E + + A++ LD
Sbjct: 360 NILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDR-AIEYLDIMV 418
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
I +++++ +LC+ V A +L+++ S+G P +N+VI SK G
Sbjct: 419 SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTE 478
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A+++L MR +GLKPD+ TY+ L+SG + G+++EA + ++ + R + +TY++++
Sbjct: 479 RAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIM 538
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
G CK + D A+ L M +P Y LI+ + + L + A LL ++ +GL
Sbjct: 539 LGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGL-AKEALDLLNELCSRGL 597
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 160/357 (44%), Gaps = 15/357 (4%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L++ C +GK + A W V EI E+ V V N LI+ + K G+ A +V ++
Sbjct: 154 SLIRGFCR-IGKTK-KATW--VMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDR 209
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ TY + L A V ++ ++ PD +I CK
Sbjct: 210 MN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESG 266
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIK 339
+A + R K P LI+ +C+E DE +K L++ + +
Sbjct: 267 VGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKF----LNNMPSYGCQPNVI 322
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
+ ++RS+C A+ LLS M+ +G P FN +I+ + G + A+++L+ M
Sbjct: 323 THNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKM 382
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
G P+ +Y L+ G+ +M+ A E L+ VTY+TL+ CK +
Sbjct: 383 PMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 442
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
D A+++LN++ G P + YN +I L K A KLL++MR KGL + IT
Sbjct: 443 DVAVEILNQLSSKGCSPVLITYNTVIDGLS-KVGKTERAIKLLDEMRRKGLKPDIIT 498
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 133/278 (47%), Gaps = 5/278 (1%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
+ L R + + E M+ G +PD +I FC+ GK K+A V + +
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180
Query: 299 YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
P LIS C+ E + AL +LD + + +++++R+LC + A
Sbjct: 181 VPDVITYNVLISGYCKSGE-IDNALQVLDRMNVAP---DVVTYNTILRTLCDSGKLKQAM 236
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+L + + + P + +I A K + AM++L MR++G KPDV TY L++G
Sbjct: 237 EVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGI 296
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G+++EA + LN + + +T++ ++R C + A KLL++M G P+V
Sbjct: 297 CKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSV 356
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+N LI LC + L R + +LE M + G N ++
Sbjct: 357 VTFNILINFLCRQGLLGRAID-ILEKMPMHGCTPNSLS 393
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 156/345 (45%), Gaps = 10/345 (2%)
Query: 182 DIVKEIGEKEKGVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFT-- 238
++++E+ K VL + N + K A E+ D + +T F+
Sbjct: 128 ELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTL 187
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
I+ L + D A SV + MI G +P+ +++ CK K + AH + +K +
Sbjct: 188 IDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGV 247
Query: 299 YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEA-RKYAIKP----FSSVIRSLCRMKD 353
P + L+ + C+ V AL++L + + P F+ +I C+ +
Sbjct: 248 TPDVITYSVLVDAFCKASR-VDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGN 306
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
A L +M+++ P F ++I KAG + A ++L LM + G+ P+V TY
Sbjct: 307 FEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNA 366
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
L+ G G++EEAC+ L E + +TY +L+ C+ D AL+L++E+K G
Sbjct: 367 LVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFG 426
Query: 474 VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRA 518
P+ YN L+ L K+ A +LE+M KG + T A
Sbjct: 427 WDPDTVTYNILVDGL-WKSGKTEQAITVLEEMVGKGHQPDSFTFA 470
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 117/257 (45%), Gaps = 48/257 (18%)
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLS 362
++ SLC+ +T + L+ F GE + + P ++++I LC+ D+ L
Sbjct: 6 IVLQSLCRAGDTAR----ALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFE 61
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG 422
+++ G P +N++I + KAGD+ A + M SRG P+V TY+ L++G G
Sbjct: 62 ELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVG 121
Query: 423 QME-------------------------------------EACEILNEAKKNHSRLSP-- 443
+++ EACE++ + R+SP
Sbjct: 122 RIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDT 181
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
VT+ TLI G CK + D A + ++M G PNV YN L+ LC KA A ++E
Sbjct: 182 VTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLC-KADKMERAHAMIE 240
Query: 504 DMRLKGLHLNGITRALI 520
M KG+ + IT +++
Sbjct: 241 SMVDKGVTPDVITYSVL 257
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 153/368 (41%), Gaps = 46/368 (12%)
Query: 201 NELIALFSKLGKGKAAFEVF-NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N ++ + G A E+F + G TY I L + + E+++
Sbjct: 5 NIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELV 64
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---D 316
E G PD +I CK G +EA ++ + P + LI+ LC+ D
Sbjct: 65 ERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRID 124
Query: 317 ETVKLALDM-----------------LDDFSGEA------------RKYAIK------PF 341
E +L +M LD ++ R +++ F
Sbjct: 125 EARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTF 184
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
S++I LC+ + A ++ MI+ G P +N++++ KA M A M++ M
Sbjct: 185 STLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVD 244
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR---LSP--VTYHTLIRGYCKL 456
+G+ PDV TY+ L+ + +++EA E+L+ L P VT++ LI G CK
Sbjct: 245 KGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKA 304
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
F+ A L EM +QP+V + LI LC KA A +L+ M G+ N +T
Sbjct: 305 GNFEQASALFEEMVAKNLQPDVMTFGALIDGLC-KAGQVEAARDILDLMGNLGVPPNVVT 363
Query: 517 -RALIRAV 523
AL+ +
Sbjct: 364 YNALVHGL 371
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 126/311 (40%), Gaps = 14/311 (4%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+ K K + A + D G + TY ++A + D A + M
Sbjct: 220 NALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMAS 279
Query: 261 TGS-----LPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
G +PD +I+ CK G ++A ++ K + P LI LC+
Sbjct: 280 RGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKA 339
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ V+ A D+LD + +++++ LC+ + A L +M+S G P +
Sbjct: 340 GQ-VEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSIT 398
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+ S++ A +A A++++ ++S G PD TY L+ G G+ E+A +L E
Sbjct: 399 YGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMV 458
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+ T+ G + ++LL + G+ P+ + C LDW
Sbjct: 459 GKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDA--------TTCSSILDW 510
Query: 496 RTAEKLLEDMR 506
L+D++
Sbjct: 511 VCRSGKLDDVK 521
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 140/335 (41%), Gaps = 24/335 (7%)
Query: 110 LLQSSVDGYLESSLDSFELDLHEDFVLKVLETPLVLGENLVCFFKWVTSGVV------DA 163
L++S DG L S D+ D + K + + E F + G V +A
Sbjct: 166 LMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQ----IDEACSVFDDMIAGGYVPNVITYNA 221
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
L+ +C + + +A+ + + + G V+T +L + F K + A E+ +
Sbjct: 222 LVNGLCKADKMERAHAMIESMVDKGVTPD-VITYSVL---VDAFCKASRVDEALELLHGM 277
Query: 224 GDYGCVAN-----QETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
GC N + T+ I + F+ A ++ E+M+ PD G +I C
Sbjct: 278 ASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLC 337
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKY 336
K G+ + A + L + P +VV + L+ LC+ ++ A L++
Sbjct: 338 KAGQVEAARDILDLM--GNLGVPPNVVTYNALVHGLCKSGR-IEEACQFLEEMVSSGCVP 394
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ S++ +LCR A L+S++ S G P +N ++ K+G A+ +L
Sbjct: 395 DSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVL 454
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+ M +G +PD +T+ SG G + E+L
Sbjct: 455 EEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELL 489
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 2/136 (1%)
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSR-GLKPDVYTYTGLMSGYANGGQMEEACEILN 432
A +N V+ + +AGD A+E+ + +R G+ P + TY +++G + E+
Sbjct: 2 ADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFE 61
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
E + VTY+TLI CK + + A +L +M G PNV Y+ LI LC K
Sbjct: 62 ELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLC-KV 120
Query: 493 LDWRTAEKLLEDMRLK 508
A +L+++M K
Sbjct: 121 GRIDEARELIQEMTRK 136
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 163/356 (45%), Gaps = 12/356 (3%)
Query: 161 VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVF 220
+ L+K +C + +E D V G V ++N L K G+ +AA +V
Sbjct: 137 ITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGL----CKTGETRAALQVL 192
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
K N Y I++L + K+ A +C +MI PD +I
Sbjct: 193 RKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIV 252
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
G+ KEA ++ K + P L+ LC+E E +K A ++L + I
Sbjct: 253 GRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGE-MKKARNVLAVMIKQGVDSNIVT 311
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++S++ +K + A + + M G P ++ +I+ K + A+ + K M
Sbjct: 312 YNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMH 371
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP---VTYHTLIRGYCKLE 457
S+ + P+ TY L+ G G++ +A +++NE H+R P +TY +L+ CK
Sbjct: 372 SKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEM---HNRGQPADVITYSSLLDALCKNH 428
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
+ D A+ L+ ++KD G+QPN+ Y L+ LC K + A+ + +D+ +KG HL+
Sbjct: 429 QVDKAITLITKIKDQGIQPNIYTYTILVDGLC-KNGRLKDAQAVYQDLLIKGYHLD 483
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 137/284 (48%), Gaps = 4/284 (1%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
T+ I ++A+SV K+ + G PD+ + +I C GK +EA +
Sbjct: 101 TFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDV 160
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
K + Q LI+ LC+ ET + AL +L G + + ++++I SLC+ K
Sbjct: 161 IAKGFHLDQVSYGTLINGLCKTGET-RAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKL 219
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
V A L S+MI + P + ++I G + A+ + M + +KPDVYT+
Sbjct: 220 VIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNI 279
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
L+ G G+M++A +L K + VTY++L+ GY +++ + A + N M G
Sbjct: 280 LVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRG 339
Query: 474 VQPNVDEYNKLIQSLC-LKALDWRTAEKLLEDMRLKGLHLNGIT 516
V P+V Y+ +I LC K +D A L ++M K + N +T
Sbjct: 340 VTPDVQSYSIMINGLCKTKMVD--EAVNLFKEMHSKSMAPNTVT 381
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 92/201 (45%), Gaps = 7/201 (3%)
Query: 289 VYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSL 348
++ L R ++Y Q + +F I ++ + L M + I F+ ++ SL
Sbjct: 22 LFLLCRHSRLYYTQPLPSF-IDNVDDAVSSFNHILHMRNPVQ------PIFEFNKILSSL 74
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
++ H A + +M + P FN +I+ + G + A +L + G PD
Sbjct: 75 VKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDT 134
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNE 468
T T L+ G G++ EA ++ L V+Y TLI G CK E AL++L +
Sbjct: 135 VTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRK 194
Query: 469 MKDVGVQPNVDEYNKLIQSLC 489
+ + VQPNV YN +I SLC
Sbjct: 195 IDGLLVQPNVVMYNTIIDSLC 215
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 80/186 (43%), Gaps = 5/186 (2%)
Query: 329 FSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
FS + I+P F+ +I C + ++ A ++L+K+ G P ++I
Sbjct: 86 FSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLC 145
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV 444
G + A+ + ++G D +Y L++G G+ A ++L + + + V
Sbjct: 146 LNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVV 205
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLED 504
Y+T+I CK + A L +EM + P+V Y LI CL + A L
Sbjct: 206 MYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYG-CLIVGRLKEAVGLFNQ 264
Query: 505 MRLKGL 510
M LK +
Sbjct: 265 MLLKNI 270
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 150/310 (48%), Gaps = 6/310 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI+ K G+ + A +F+K + G V N TY I+ + + A+S ++M++ G
Sbjct: 249 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 308
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS--SLCQEDETVK 320
+P ++ G+ EA + R+K + P LI+ S C K
Sbjct: 309 IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCG---NAK 365
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A D+ ++ + + ++S+I L R + A L K++ +G P +FN++I
Sbjct: 366 RAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMI 425
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ G++ A +LK M + + PD T+ LM G G++EEA +L+E K +
Sbjct: 426 DGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIK 485
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
++Y+TLI GY + + A + +EM +G P + YN LI+ LC K + AE+
Sbjct: 486 PDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLC-KNQEGDLAEE 544
Query: 501 LLEDMRLKGL 510
LL++M KG+
Sbjct: 545 LLKEMVNKGI 554
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 150/326 (46%), Gaps = 5/326 (1%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L+ +C +E L+D + EIG V N LI + G + AF ++
Sbjct: 248 SLISGMCKEGRLEEASGLFDKMVEIGLVPNAV----TYNTLIDGYCNKGDLERAFSYRDE 303
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + + TY + AL A + ++M + G +PD+ +I+ + + G
Sbjct: 304 MVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGN 363
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
AK A ++ K + P LI L + + +K A D+ + + + F+
Sbjct: 364 AKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNR-MKEADDLFEKILDQGVSPDVIMFN 422
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
++I C +V A LL +M + PP FN+++ + G + A +L M+ R
Sbjct: 423 AMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXR 482
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G+KPD +Y L+SGY G +++A + +E + +TY+ LI+ CK +E D A
Sbjct: 483 GIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLA 542
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSL 488
+LL EM + G+ P+ Y LI+ +
Sbjct: 543 EELLKEMVNKGISPDDSTYLSLIEGM 568
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 106/197 (53%), Gaps = 4/197 (2%)
Query: 324 DMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAY 383
++ D+ + + ++K SS++ L K + A+ + M G P +N++I Y
Sbjct: 162 ELFDELTLSRDRLSVK--SSIVFDLLEGK-LKKAREFIGFMEGLGFKPNVVSYNTIIHGY 218
Query: 384 SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
S G++ A +L MR +G++PD YTY L+SG G++EEA + ++ + +
Sbjct: 219 SSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNA 278
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
VTY+TLI GYC + + A +EM G+ P+V YN L+ +L ++ A+ +++
Sbjct: 279 VTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEG-RMGEADDMIK 337
Query: 504 DMRLKGLHLNGITRALI 520
+MR KG+ + IT ++
Sbjct: 338 EMRKKGIIPDAITYNIL 354
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 113/246 (45%), Gaps = 16/246 (6%)
Query: 182 DIVKEIGEKEKGVLTVEIL-NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIE 240
D++KE+ ++KG++ I N LI +S+ G K AF++ N+ G TY I
Sbjct: 334 DMIKEM--RKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIY 391
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP 300
LSRR A + EK+++ G PD +I C G + A ++ K + P
Sbjct: 392 VLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPP 451
Query: 301 PQSVVAFLISSLCQED--ETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDV 354
+ L+ C+E E ++ LD E + IKP ++++I R D+
Sbjct: 452 DEVTFNTLMQGRCREGKVEEARMLLD-------EMKXRGIKPDHISYNTLISGYGRRGDI 504
Query: 355 HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
A + +M+S G P +N++I K + A E+LK M ++G+ PD TY L
Sbjct: 505 KDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSL 564
Query: 415 MSGYAN 420
+ G N
Sbjct: 565 IEGMGN 570
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 82/181 (45%), Gaps = 5/181 (2%)
Query: 334 RKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
R I+P + S+I +C+ + A L KM+ G P +N++I Y GD+
Sbjct: 235 RVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDL 294
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
A M +G+ P V TY L+ G+M EA +++ E +K +TY+ L
Sbjct: 295 ERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNIL 354
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
I GY + A L NEM G++P Y LI L + + A+ L E + +G
Sbjct: 355 INGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRN-RMKEADDLFEKILDQG 413
Query: 510 L 510
+
Sbjct: 414 V 414
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 84/195 (43%), Gaps = 9/195 (4%)
Query: 328 DFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAY 383
+F G KP ++++I ++ GA+ +L M +G P + + S+IS
Sbjct: 194 EFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGM 253
Query: 384 SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
K G + A + M GL P+ TY L+ GY N G +E A +E K S
Sbjct: 254 CKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSV 313
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ--SLCLKALDWRTAEKL 501
TY+ L+ A ++ EM+ G+ P+ YN LI S C A + A L
Sbjct: 314 STYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNA---KRAFDL 370
Query: 502 LEDMRLKGLHLNGIT 516
+M KG+ +T
Sbjct: 371 HNEMLSKGIEPTHVT 385
>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Brachypodium distachyon]
Length = 597
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 171/389 (43%), Gaps = 24/389 (6%)
Query: 156 VTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKA 215
VT G+ L+K +C + + ++ D + G + V +LN ++ K G+ +
Sbjct: 173 VTYGI---LVKGLCKAGRVGDALSVLDGMS--GPESDVCPDVVMLNNIVDGLCKTGRLQQ 227
Query: 216 AFEVFNKF--GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
A + + +GC N TY A R A + KM + P++ + I
Sbjct: 228 AVKFVEERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTI 287
Query: 274 ISWFCKGGKA-------KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
+ C G+ +E V+ AR + V AFL V +A+++
Sbjct: 288 VGGLCWVGRVGAALEFFREKRTVWPEARGNAVTYSTLVGAFL------HTNNVGVAMELF 341
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
+ E + ++I L + + A ++ + M G +N +I + +
Sbjct: 342 HEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRR 401
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
+ A E+L M+ GL+PDVYTY L+SG G E+L + R S VT+
Sbjct: 402 KRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTF 461
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
TLI GYCK+ + D AL++ M + G+QPN YN LI LC K+ D A +L ++MR
Sbjct: 462 GTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLC-KSRDTSLAIELFDEMR 520
Query: 507 LKGLHLNGIT-RALIRAV--KELEEDAIE 532
K + N T AL++ + K + E A E
Sbjct: 521 EKHVPANVTTFNALLKGLRDKNMPEKAFE 549
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 111/249 (44%), Gaps = 3/249 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
L+ F A E+F++ D G + Y+ I L++ D AWS+ M + G
Sbjct: 324 LVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAG 383
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
D++ +I FC+ + EA+ + +E + P L+S LC+ + LA
Sbjct: 384 FQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDF--LA 441
Query: 323 LD-MLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
+D +L + ++ F ++I C++ + A + M G P ++N++I
Sbjct: 442 VDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLID 501
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
K+ D + A+E+ MR + + +V T+ L+ G + E+A E+++ ++
Sbjct: 502 FLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTP 561
Query: 442 SPVTYHTLI 450
VT L+
Sbjct: 562 DYVTIDILM 570
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 128/306 (41%), Gaps = 11/306 (3%)
Query: 189 EKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVA--NQETYYFTIEALSRRK 246
EKE+ LN ++ +G+ AA E F + A N TY + A
Sbjct: 273 EKERVTPNAVTLNTIVGGLCWVGRVGAALEFFREKRTVWPEARGNAVTYSTLVGAFLHTN 332
Query: 247 IFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVA 306
A + +M++ G+ PD+ +IS + G+ +A + T ++
Sbjct: 333 NVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYN 392
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLS 362
LI C+ L+ + GE ++ ++P +++++ LC+ D LL
Sbjct: 393 ILIGGFCRRKR-----LNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLG 447
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG 422
KMI G P F ++I Y K G + A+ + + M G++P+ Y L+
Sbjct: 448 KMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSR 507
Query: 423 QMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
A E+ +E ++ H + T++ L++G + A +L++ M++ P+ +
Sbjct: 508 DTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTID 567
Query: 483 KLIQSL 488
L++ L
Sbjct: 568 ILMEWL 573
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 82/164 (50%), Gaps = 5/164 (3%)
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A+ L + + PPP + FN+++ A ++AGD+ ++ MR ++P+V TY L+
Sbjct: 121 ARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVK 180
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNE-MKDV- 472
G G++ +A +L+ S + P V + ++ G CK A+K + E M+ V
Sbjct: 181 GLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVH 240
Query: 473 GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
G PN YN L + C +A + A +L+ M + + N +T
Sbjct: 241 GCAPNTVTYNCLAHAFC-RAGNVGMACELVAKMEKERVTPNAVT 283
>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 822
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 157/367 (42%), Gaps = 38/367 (10%)
Query: 190 KEKGVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
K KG L T+E LI F K GK + ++ N+ G N + + I+A + +
Sbjct: 267 KLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLV 326
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
D A + M E G PD +I++ C GG+ KEA A+E+ + P + L
Sbjct: 327 DKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPL 386
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRS--------------------- 347
+ + C++ + V +A DML + K + + + I
Sbjct: 387 MHAYCKQGDYV-MASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKG 445
Query: 348 --------------LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
LC+ AK LLS+M+ P ++ +++ + + ++ A
Sbjct: 446 VFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKAT 505
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
E+ +++ S+G+ P V Y ++ G G+M +A +N+ K + T+ T+I GY
Sbjct: 506 ELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGY 565
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
K + D ALK+ +M +PNV Y LI C K D AEK+ M+ L N
Sbjct: 566 VKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFC-KIADMSRAEKVFRAMQSFNLEPN 624
Query: 514 GITRALI 520
+T ++
Sbjct: 625 VVTYTIL 631
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 132/291 (45%), Gaps = 5/291 (1%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+ N LI G+ K A E + + + N+ +Y + A ++ + A +
Sbjct: 345 ITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLF 404
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
K+ ETG PD G I GG+ A +V EK ++P + L+S LC++
Sbjct: 405 KIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKG 464
Query: 317 E--TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
KL L + D + + Y +++++ R ++ A L ++S+G PG
Sbjct: 465 RFPAAKLLLSEMLDLNLQPDAYM---YATLVDGFIRNNELDKATELFEVVMSKGIDPGVV 521
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
+N +I K G MT A+ + M+ PD YT++ ++ GY ++ A ++ +
Sbjct: 522 GYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQM 581
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
K + + V Y +LI G+CK+ + A K+ M+ ++PNV Y LI
Sbjct: 582 MKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILI 632
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 113/279 (40%), Gaps = 37/279 (13%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
GCV N Y I+ ++ A V E++ G LP E G +I FCK GK +
Sbjct: 235 GCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQ-- 292
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
++ L E + L ++ +K F+S+I
Sbjct: 293 ---------------------VVDQLLNEMNVMGLNVN-------------VKVFNSIID 318
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
+ + V A ++ M G P +N +I+ G + A E L+ + R L P
Sbjct: 319 AKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLP 378
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
+ ++YT LM Y G A ++L + + + V+Y I G E D AL +
Sbjct: 379 NKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVR 438
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
+M + GV P+ YN L+ LC K + A+ LL +M
Sbjct: 439 EKMMEKGVFPDAQIYNVLMSGLCKKG-RFPAAKLLLSEM 476
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 131/314 (41%), Gaps = 49/314 (15%)
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
D A V EKM+E G PD++ ++S CK G+ A ++ + + + P + A L
Sbjct: 432 DVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATL 491
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR-------------MK--- 352
+ + +E K A ++ + + + ++ +I+ LC+ MK
Sbjct: 492 VDGFIRNNELDK-ATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIAN 550
Query: 353 -------------------DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
D+ A + +M+ + P + S+I+ + K DM+ A
Sbjct: 551 HAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAE 610
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
++ + M+S L+P+V TYT L+ G++ G+ E+A N+ + T+H LI G
Sbjct: 611 KVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGL 670
Query: 454 CKL----------EEFDCALKL--LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+ EE D +L L M G + YN +I LC + TA+ L
Sbjct: 671 TNITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGM-VDTAQLL 729
Query: 502 LEDMRLKGLHLNGI 515
M KG ++ +
Sbjct: 730 QTKMLRKGFLMDSV 743
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 117/279 (41%), Gaps = 7/279 (2%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA-HVV 289
N Y ++ + + ++F V E M P E + +I + + G +A +
Sbjct: 92 NNVAYSSLLKLMVKYRLFSEIEIVLEDMKNRNFKPTLEALNSVICVYAEYGFVDKAVKMF 151
Query: 290 YTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFSSVI- 345
Y + +P L++ L + D +L ML+ + +S VI
Sbjct: 152 YMVCELYNCFPCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIV 211
Query: 346 -RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
+ LC + V + L+ G P +N +I Y K GD+ A + + ++ +G
Sbjct: 212 VKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGF 271
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
P + TY L+ G+ G+ + ++LNE ++ ++++I K D A +
Sbjct: 272 LPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAE 331
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
++ M ++G +P++ YN LI C + AE+ LE
Sbjct: 332 MMRMMTEMGCEPDITTYNILINFSC-SGGRIKEAEEFLE 369
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 148/385 (38%), Gaps = 61/385 (15%)
Query: 134 FVLKVLETPLVLGENLVCFFKWVTSGVVDALLKAICSS-----VGKKEVYALWDIVKEIG 188
FV+ + P ++ + FF W ++ + L + S + K +++ +IV E
Sbjct: 64 FVIDRIHNP----QHGLYFFHWASTLPFSSPLNNVAYSSLLKLMVKYRLFSEIEIVLEDM 119
Query: 189 EKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGD-YGC----VANQETYYFTIEALS 243
+ T+E LN +I ++++ G A ++F + Y C VAN + L
Sbjct: 120 KNRNFKPTLEALNSVICVYAEYGFVDKAVKMFYMVCELYNCFPCVVANNSL----LNCLV 175
Query: 244 RRKIFDWAWSVCEKMIETGS------LPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKK 297
+ D A + +KM+E G + D+ + ++ C GK +E +
Sbjct: 176 KNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNG 235
Query: 298 MYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGA 357
P +I C++ + +K A + ++ + ++ + ++I C+
Sbjct: 236 CVPNVVFYNVIIDGYCKKGD-LKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVV 294
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
LL++M G VFNS+I A K G + A EM+++M G +PD+
Sbjct: 295 DQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDI--------- 345
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
TY+ LI C A + L K+ + PN
Sbjct: 346 --------------------------TTYNILINFSCSGGRIKEAEEFLERAKERTLLPN 379
Query: 478 VDEYNKLIQSLCLKALDWRTAEKLL 502
Y L+ + C K D+ A +L
Sbjct: 380 KFSYTPLMHAYC-KQGDYVMASDML 403
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 106/270 (39%), Gaps = 17/270 (6%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I K GK A NK ++ T+ I+ ++ D A + +M++
Sbjct: 524 NVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMK 583
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
P+ +I+ FCK A V+ + + P LI + + K
Sbjct: 584 QKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEK 643
Query: 321 LA----LDMLDDF--SGEARKYAIKPFSSVIRS-LCRMKDVHGAKTLL----SKMISEGP 369
A L ++++ + Y I +++ + L K+ ++L+ + MISEG
Sbjct: 644 AASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNEENDRSLILDFFATMISEGW 703
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
A +NS+I K G + A + M +G D ++ L+ G G+ +E
Sbjct: 704 SQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALLHGLCQTGKSKEWRN 763
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
I++ L+ + + T KL+++
Sbjct: 764 IIS------GDLTKIDFQTAFEYSLKLDKY 787
>gi|297808491|ref|XP_002872129.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297317966|gb|EFH48388.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 588
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 124/269 (46%), Gaps = 10/269 (3%)
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A V ++M + DS II C G A+ ++ + P LIS
Sbjct: 282 ALEVWKEMSQKNVPTDSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLIS 341
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMIS 366
+LC+ + D+ D G + + P + +I+ LC DV A L M+
Sbjct: 342 ALCKAGK-----FDVACDLHGTMQNVGVAPDQISYKVIIQGLCIQGDVDRANEFLQSMLK 396
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
P ++N VI Y + GD + A+ +L LM S G+KP+VYT L+ GY GG++ +
Sbjct: 397 RSLLPEVLLWNVVIDGYGRYGDTSCALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLID 456
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A + NE + TY+ L+ C L A +L +EM G QP++ Y +L++
Sbjct: 457 AWWVKNEMRSTKIHPDTTTYNLLVGAACTLGHLRLAFQLYDEMLKRGCQPDIITYTELVR 516
Query: 487 SLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
LC K + AE LL M++ G+ ++ +
Sbjct: 517 GLCWKG-RLKEAESLLSRMQVSGITMDHV 544
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 125/266 (46%), Gaps = 20/266 (7%)
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE-KKMYPPQSVVAF--LISSL 312
EKM+ +G +P +++ CK G ++A L RE ++M P + V++ LI L
Sbjct: 143 EKMLRSGFIPGLIMHNHLLNGLCKLGYIEKAD---GLVREMREMGPSPNCVSYNTLIKGL 199
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMI--- 365
C + K AL + + KY IKP + ++ +LC+ + T L + I
Sbjct: 200 CSVNNVDK-ALYLFSTLN----KYGIKPNRVTCNIIVHALCQKGVIGNNNTKLLEEILDS 254
Query: 366 SEGPPPGNAVFNSVI-SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
S+ P + V +++ + K G++ A+E+ K M + + D Y ++ G + G M
Sbjct: 255 SQVNAPLDIVTCTILMDSCFKNGNVVQALEVWKEMSQKNVPTDSVVYNVIIRGLCSSGNM 314
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
A + + K TY+TLI CK +FD A L M++VGV P+ Y +
Sbjct: 315 VAAYGFMCDMVKRGVNPDVFTYNTLISALCKAGKFDVACDLHGTMQNVGVAPDQISYKVI 374
Query: 485 IQSLCLKALDWRTAEKLLEDMRLKGL 510
IQ LC++ D A + L+ M + L
Sbjct: 375 IQGLCIQG-DVDRANEFLQSMLKRSL 399
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 111/291 (38%), Gaps = 44/291 (15%)
Query: 209 KLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSE 268
K G A EV+ + + Y I L A+ M++ G PD
Sbjct: 275 KNGNVVQALEVWKEMSQKNVPTDSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVF 334
Query: 269 KVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDD 328
+IS CK GK A ++ + + P Q +I LC + + +D ++
Sbjct: 335 TYNTLISALCKAGKFDVACDLHGTMQNVGVAPDQISYKVIIQGLCIQGD-----VDRANE 389
Query: 329 FSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
F K ++ P ++ VI R D A ++L+ M+S G P N++I Y
Sbjct: 390 FLQSMLKRSLLPEVLLWNVVIDGYGRYGDTSCALSVLNLMLSYGVKPNVYTNNALIHGYV 449
Query: 385 KAGDMTPAMEMLKLMRS-----------------------------------RGLKPDVY 409
K G + A + MRS RG +PD+
Sbjct: 450 KGGRLIDAWWVKNEMRSTKIHPDTTTYNLLVGAACTLGHLRLAFQLYDEMLKRGCQPDII 509
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
TYT L+ G G+++EA +L+ + + + V + L++ Y +L+ D
Sbjct: 510 TYTELVRGLCWKGRLKEAESLLSRMQVSGITMDHVPFLILVKKYTRLQRPD 560
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 68/132 (51%)
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
++ +S++ G M A+ + + M G P + + L++G G +E+A ++ E
Sbjct: 120 SIHSSIMRDLCLQGKMDAALWLREKMLRSGFIPGLIMHNHLLNGLCKLGYIEKADGLVRE 179
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
++ + V+Y+TLI+G C + D AL L + + G++PN N ++ +LC K +
Sbjct: 180 MREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFSTLNKYGIKPNRVTCNIIVHALCQKGV 239
Query: 494 DWRTAEKLLEDM 505
KLLE++
Sbjct: 240 IGNNNTKLLEEI 251
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 149/327 (45%), Gaps = 12/327 (3%)
Query: 189 EKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
EKE V LI FS +GK + A +F + + G A+ Y I R
Sbjct: 291 EKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNV 350
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
A + ++M + G +P + G +I CK G+ + A ++ + K + + L
Sbjct: 351 KRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTL 410
Query: 309 ISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI 365
I C+ DE ++L + M + + + ++S+ LC++ AK LL M+
Sbjct: 411 IDGYCESGMVDEALRLQVVM----EKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMV 466
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
G P F ++I Y K G+ A + + M +G P++ TY L+ GY+ G M+
Sbjct: 467 ERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMK 526
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
EA ++ +E + T +LI G C + D ALKL +EM G+ PNV Y +I
Sbjct: 527 EAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMI 586
Query: 486 QSLCLKALDWRTAE--KLLEDMRLKGL 510
L + D R+ E KL ++M+ GL
Sbjct: 587 SGL---SKDGRSEEAFKLYDEMKETGL 610
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 1/185 (0%)
Query: 305 VAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM 364
+ ++ LC+ + V++ ++D+ + + K + +++ I + D+ G +L+ M
Sbjct: 232 LTIVLDGLCKRGD-VEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLM 290
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
EG + +I +S G + A + + MR +G++ DVY YT ++S G +
Sbjct: 291 EKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNV 350
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
+ A + +E S TY LI G CK + + A L+NEM+ G+ N +N L
Sbjct: 351 KRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTL 410
Query: 485 IQSLC 489
I C
Sbjct: 411 IDGYC 415
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 1/129 (0%)
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
A + G + + + M + ++ VY+ T ++ G G +E ++++E +
Sbjct: 203 ALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKA 262
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+ VTY+ I GY K + ++L M+ GV NV Y LI A++L
Sbjct: 263 NVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFS-NIGKIEEAQRL 321
Query: 502 LEDMRLKGL 510
E+MR KG+
Sbjct: 322 FEEMREKGI 330
>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 141/312 (45%), Gaps = 9/312 (2%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRR----KIFDWAWSVCEKM 258
++ +G+ A N + G + + T I+A ++ ++ + W KM
Sbjct: 230 MVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFW----KM 285
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+E G P+ +I+ CK G K+A + + P LI LC++ T
Sbjct: 286 VEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWT 345
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
K L + K + ++++I C+ ++ A+ LLS+M +G P + +
Sbjct: 346 EKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTT 405
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I + K G+ A E++ LM G P++YTY ++ G G ++EA +LN+ +
Sbjct: 406 LIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHG 465
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
+ VTY L+ +C+ + + +L N+M VG P++ Y LI + C + + +
Sbjct: 466 LQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFC-RQKQMKES 524
Query: 499 EKLLEDMRLKGL 510
E+L E+ GL
Sbjct: 525 ERLFEEAVSLGL 536
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 140/328 (42%), Gaps = 9/328 (2%)
Query: 163 ALLKAICSSVGKKEVYALW-DIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
L+ +C ++ + L+ +V+ G K V +I + K K A + +
Sbjct: 334 TLIDGLCKKGWTEKAFRLFLKLVRSDGYKPN----VHTYTAMINGYCKEDKLNRAEMLLS 389
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ + G V N TY I+ + F A+ + + M + G P+ II CK G
Sbjct: 390 RMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKG 449
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
EA+ + + L+S C++ +T + +L + I +
Sbjct: 450 SLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNR-SLVFFNKMLKVGFTPDIHSY 508
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+++I + CR K + ++ L + +S G P + S+I Y + G+ + A+++ + M +
Sbjct: 509 TTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSN 568
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G PD TY L+SG ++++A + + VT TL YCK ++
Sbjct: 569 HGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSST 628
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A+ +L+ ++ + + N L++ LC
Sbjct: 629 AINVLDRLEK---RQWIRTVNTLVRKLC 653
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 108/240 (45%), Gaps = 13/240 (5%)
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLAL-DMLDDFSGEARK 335
F + GK KEA + + + + P + C D V + L ++ ++ E +
Sbjct: 164 FAENGKLKEAVNMVVEMQNQGLVPSTQTLN------CVLDVAVGMGLVEIAENMFVEMCQ 217
Query: 336 YAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
+ P F ++ + C M V A+ L+ M+ G NA +I A+ + G +
Sbjct: 218 RGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNR 277
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
+ M GL P+V +T L++G G +++A E+L E + + + T+ TLI
Sbjct: 278 VVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLID 337
Query: 452 GYCKLEEFDCALKL-LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
G CK + A +L L ++ G +PNV Y +I C K AE LL M+ +GL
Sbjct: 338 GLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYC-KEDKLNRAEMLLSRMQEQGL 396
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 89/225 (39%), Gaps = 3/225 (1%)
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
E+ +K A++M+ + + + + + V+ M V A+ + +M G P
Sbjct: 166 ENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCV 225
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
F ++ A G + A L M RG D T T ++ + G + +
Sbjct: 226 SFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKM 285
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
+ + + + LI G CK A +LL EM G +PNV + LI LC K
Sbjct: 286 VEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWT 345
Query: 495 WRTAEKLLEDMRLKGLHLNGIT-RALIRAVKELEEDAIENGEALV 538
+ L+ +R G N T A+I +ED + E L+
Sbjct: 346 EKAFRLFLKLVRSDGYKPNVHTYTAMINGY--CKEDKLNRAEMLL 388
>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 724
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 153/326 (46%), Gaps = 7/326 (2%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
E++ ++ FS++G+ A + + G + T +E + D+A +V ++
Sbjct: 171 EVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDE 230
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M G PDS ++ + GK +EA + ++ P + ++S+LC E+
Sbjct: 231 MSVRGVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALC-ENG 289
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
V A+ K + F+S+I LC+ + A +L +M+ G P
Sbjct: 290 LVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHT 349
Query: 378 SVISAYSKAGDMTPAMEM-LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
++I K G A + LKL+RS KP+V+TYT ++ GY ++ A + + K+
Sbjct: 350 ALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKE 409
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ TY TLI G+CK FD A +L+N M D G +PN+ YN +I SLC K+ R
Sbjct: 410 QGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKS---R 466
Query: 497 TAE--KLLEDMRLKGLHLNGITRALI 520
E +LL GL +G+T ++
Sbjct: 467 APEAYELLNKAFSCGLEADGVTYTIL 492
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 112/263 (42%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G + + T + AL + + A KMI+ G P+ +I CK G K+A
Sbjct: 270 GFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQA 329
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
+ P LI LC+ T K L + K + ++S+I
Sbjct: 330 FEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIG 389
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
C+ ++ A+ L S+M +G P + ++I+ + KAG+ A E++ LM G +P
Sbjct: 390 GYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRP 449
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
++YTY ++ + EA E+LN+A VTY LI+ CK + AL
Sbjct: 450 NIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFF 509
Query: 467 NEMKDVGVQPNVDEYNKLIQSLC 489
M G + ++ N LI + C
Sbjct: 510 CRMNKTGFEADMRLNNILIAAFC 532
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 135/337 (40%), Gaps = 38/337 (11%)
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
F K D G N + I+ L ++ A+ + E+M+ G P+ +I CK
Sbjct: 298 FRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCK 357
Query: 280 GGKAKEAHVVYTLAREKKMYPPQ-SVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
G ++A ++ +Y P +I C+ED+ + + + + +
Sbjct: 358 RGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEM-LFSRMKEQGLFPNV 416
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
++++I C+ + A L++ M EG P +N+VI + K A E+L
Sbjct: 417 NTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNK 476
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEA----CEILNEAKKNHSRLSPV---------- 444
S GL+ D TYT L+ +++A C + + RL+ +
Sbjct: 477 AFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKK 536
Query: 445 ---------------------TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
TY ++I GYCK +FD ALK + MK G P+ Y
Sbjct: 537 MKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGS 596
Query: 484 LIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
LI LC K++ A KL E M +GL +TR +
Sbjct: 597 LISGLCKKSM-VDEACKLYEAMIDRGLSPPEVTRVTL 632
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 131/316 (41%), Gaps = 43/316 (13%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
LI K G K AFE+ + G N T+ I+ L +R + A+ + K++
Sbjct: 313 FTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLV 372
Query: 260 ETGSL-PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE--- 315
+ P+ +I +CK K A ++++ +E+ ++P + LI+ C+
Sbjct: 373 RSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNF 432
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
D +L ++++DD E + I +++VI SLC+ A LL+K S G
Sbjct: 433 DRAYEL-MNLMDD---EGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVT 488
Query: 376 F-----------------------------------NSVISAYSKAGDMTPAMEMLKLMR 400
+ N +I+A+ + M + + +L+
Sbjct: 489 YTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVV 548
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
S GL P TYT ++SGY G + A + + K++ TY +LI G CK D
Sbjct: 549 SLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVD 608
Query: 461 CALKLLNEMKDVGVQP 476
A KL M D G+ P
Sbjct: 609 EACKLYEAMIDRGLSP 624
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 79/189 (41%), Gaps = 8/189 (4%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LIA F + K K + +F G V +ETY I + FD A M
Sbjct: 525 NILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKR 584
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G +PDS G +IS CK EA +Y ++ + PP+ L C+ +++
Sbjct: 585 HGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSAS 644
Query: 321 --LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+ L+ LD +K I+ +++R LC K V A K++ + +
Sbjct: 645 AMIVLEPLD------KKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAA 698
Query: 379 VISAYSKAG 387
+A S++G
Sbjct: 699 FTTACSESG 707
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 103/294 (35%), Gaps = 39/294 (13%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
V +I + K K A +F++ + G N TY I + FD A+ +
Sbjct: 380 NVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELM 439
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
M + G P+ +I CK +A EA+ + A + LI C++
Sbjct: 440 NLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQ 499
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ +K AL + + ++ + +I + CR K + ++ L ++S G P
Sbjct: 500 SD-IKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKET 558
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMR----------------------------------- 400
+ S+IS Y K GD A++ M+
Sbjct: 559 YTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMI 618
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
RGL P T L Y A +L K +L T TL+R C
Sbjct: 619 DRGLSPPEVTRVTLAYEYCKRNDSASAMIVLEPLDK---KLWIRTVRTLVRKLC 669
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 69/162 (42%), Gaps = 7/162 (4%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ A C KE L+ +V +G V T E +I+ + K G A + F+
Sbjct: 525 NILIAAFCRQKKMKESERLFQLVVSLGL----VPTKETYTSMISGYCKEGDFDLALKYFH 580
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+GCV + TY I L ++ + D A + E MI+ G P + +CK
Sbjct: 581 NMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRN 640
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLAL 323
+ A +V +KK++ V L+ LC E + AL
Sbjct: 641 DSASAMIVLE-PLDKKLWI--RTVRTLVRKLCSEKKVGVAAL 679
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 125/272 (45%)
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
+F+ D G V+N I A ++R + D A V +M G P+ +IS F
Sbjct: 393 NLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAF 452
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
C+ G+ +A ++ + P +V LI C + VK + + S +
Sbjct: 453 CRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPN 512
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
I FSS+I SLC V A+ + + +I G P FNS+I Y G M A +L
Sbjct: 513 IVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLD 572
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M S G++PDV T L+SGY G++++ + E + + VTY+ ++ G +
Sbjct: 573 AMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAG 632
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A K+ +EM D G ++D Y L++ LC
Sbjct: 633 RTSAAKKMFHEMIDSGTAVDIDTYKILLKGLC 664
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 157/334 (47%), Gaps = 8/334 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEIL--NELIALFSKLGKGKAAFEV 219
+ ++K++C +E D+V+ + KE G + +++ N +I F K G+ A +
Sbjct: 199 NTVIKSLCGDSRSQEA---LDMVQRMA-KEGGRCSPDVVSFNTVIHGFFKQGEVSKACNL 254
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
FN+ G V + TY ++AL + + D A V +M++ G PD II +
Sbjct: 255 FNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSC 314
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
G KE+ ++ K + P + +SSLC+ + K A ++ + + I
Sbjct: 315 SGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRS-KDAEEIFQYMTTKGHMPDIV 373
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
+S ++ L M +G N +ISA++K G M AM + M
Sbjct: 374 SYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEM 433
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
+ +G++P+V TY+ L+S + G++ +A E ++ + YH+LI G+C +
Sbjct: 434 QGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDL 493
Query: 460 DCALKLLNEMKDVGV-QPNVDEYNKLIQSLCLKA 492
A + ++EM G+ +PN+ ++ +I SLC++
Sbjct: 494 VKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEG 527
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 124/264 (46%), Gaps = 6/264 (2%)
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEA-HVVYTLAREKKMYPPQSVVAF--LISSL 312
+M E +PD+ +I C +++EA +V +A+E P VV+F +I
Sbjct: 184 HRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPD-VVSFNTVIHGF 242
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
++ E K A ++ ++ + + ++S++ +LC+ + + A+ +L +M+ +G P
Sbjct: 243 FKQGEVSK-ACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPD 301
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+N++I YS +G + +M + M S+GL PD T++ MS G+ ++A EI
Sbjct: 302 GVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQ 361
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
V+Y L+ GY F L + M D G+ N N LI + +
Sbjct: 362 YMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRG 421
Query: 493 LDWRTAEKLLEDMRLKGLHLNGIT 516
+ A + +M+ +G+ N +T
Sbjct: 422 M-MDEAMLVFTEMQGQGVRPNVVT 444
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 17/219 (7%)
Query: 301 PQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTL 360
P V+A L + +C+E+ ++A ++ + ++ CR +
Sbjct: 100 PALVLA-LFNRICREEAGPRVA------------PLTVRTYGILMDCCCRARRPDLGPAF 146
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME-MLKLMRSRGLKPDVYTYTGLMSGYA 419
+++++ G G + + A A++ +L M PD +Y ++
Sbjct: 147 VARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLC 206
Query: 420 NGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
+ +EA +++ K R SP V+++T+I G+ K E A L NEM GV P+
Sbjct: 207 GDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPD 266
Query: 478 VDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
V YN ++ +LC KA AE +L M KG+ +G+T
Sbjct: 267 VGTYNSIVDALC-KARAMDKAEFVLRQMVDKGVEPDGVT 304
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 103/244 (42%), Gaps = 7/244 (2%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ A +VFN G T+ I+ + A+ V + M+ G PD
Sbjct: 527 GRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTN 586
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV---KLALDMLD 327
++S +CK GK + +++ KK+ P ++ L + T K+ +M+D
Sbjct: 587 NTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMID 646
Query: 328 DFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG 387
SG A I + +++ LCR A TL K+ + + N++I+A K
Sbjct: 647 --SGTA--VDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVR 702
Query: 388 DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYH 447
A ++ + + GL P+V TY ++ G +EEA + + +K+ S +
Sbjct: 703 RREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLN 762
Query: 448 TLIR 451
+IR
Sbjct: 763 DIIR 766
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 112/271 (41%), Gaps = 7/271 (2%)
Query: 162 DALLKAICSSVGKKE-VYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVF 220
++L+ C VGK E + + D + +G E V+T N L++ + K GK +F
Sbjct: 552 NSLIDGYCL-VGKMEKAFGVLDAMVSVG-IEPDVVTN---NTLVSGYCKSGKIDDGLILF 606
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ TY ++ L R A + +MI++G+ D + ++ C+
Sbjct: 607 REMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRN 666
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
EA ++ +++ +I++L + + A D+ S +
Sbjct: 667 DLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREE-ANDLFAAISTSGLVPNVST 725
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+ +IR+L + V A T+ S M G P + + N +I + GD+ A + +
Sbjct: 726 YGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVD 785
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+ + T + LMS +++ G+ E + L
Sbjct: 786 GTIISLEASTTSLLMSLFSSKGKHREQIKFL 816
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 165/356 (46%), Gaps = 38/356 (10%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V N LI + + + A + + D+G + +++T+ ++ D A V E
Sbjct: 195 VSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKE 254
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEA-HVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+M+E G + + V +++ FCK G+ +EA + ++ + +P + L++ L +
Sbjct: 255 QMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKT 314
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
VK AL+++D E I ++S+I LC++ +V A +L++MI P
Sbjct: 315 GH-VKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVT 373
Query: 376 FNSVISAYSKAGDM-----------------------------------TPAMEMLKLMR 400
+N++IS K + T AME+ K M+
Sbjct: 374 YNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMK 433
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
++G PD +TY L+ G+++EA +L E + + + +TY+TLI G+CK +
Sbjct: 434 TKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIA 493
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A ++ ++M+ GV N YN LI LC K+ A +L++ M ++GL + T
Sbjct: 494 EAEEIFDQMELQGVSRNSVTYNTLIDGLC-KSERVEEASQLMDQMIMEGLRPDKFT 548
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 177/371 (47%), Gaps = 26/371 (7%)
Query: 163 ALLKAICSSVGKK-EVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
++ K + +GK E A+ DI+KE+ K L+V I N+ + +F + A+F ++N
Sbjct: 90 SIFKEVLHKLGKAGEFDAMKDILKEM----KISLSV-IDNDSLLVFIE---SYASFGLYN 141
Query: 222 ---KFGD-----YGCVANQETYYFTIEAL---SRRKIFDWAWSVCEKMIETGSLPDSEKV 270
+F D +G VAN Y F + L ++ K+ + A S M+ G PD
Sbjct: 142 EILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHS---NMVSRGIRPDVSTF 198
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
+I C+ + + A ++ + + P + ++ +E + A+ + +
Sbjct: 199 NILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEG-NLDGAMRVKEQMV 257
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM-ISEGPPPGNAVFNSVISAYSKAGDM 389
+ ++ C+ + A + +M + EG P FN +++ SK G +
Sbjct: 258 EAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHV 317
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
A+E++ +M G PD+YTY L+SG G+++EA ++LN+ + + VTY+T+
Sbjct: 318 KHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTI 377
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
I CK + + A KL + G+ P+V YN LIQ LCL + + A +L ++M+ KG
Sbjct: 378 ISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCL-SRNHTVAMELYKEMKTKG 436
Query: 510 LHLNGITRALI 520
H + T ++
Sbjct: 437 CHPDEFTYNML 447
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 143/299 (47%), Gaps = 8/299 (2%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G ++ T+ + LS+ A V + M+ G PD +IS CK G+ EA
Sbjct: 296 GFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEA 355
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQED---ETVKLALDMLDDFSGEARKYAIKPFSS 343
V E+ P +IS+LC+E+ E KLAL + +G+ + ++S
Sbjct: 356 VKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVL----TGKGILPDVCTYNS 411
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
+I+ LC ++ A L +M ++G P +N +I + G + A+ +LK M G
Sbjct: 412 LIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSG 471
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
+V TY L+ G+ ++ EA EI ++ + + VTY+TLI G CK E + A
Sbjct: 472 CARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEAS 531
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRA 522
+L+++M G++P+ YN L+ C KA D + A +++ M G + +T + A
Sbjct: 532 QLMDQMIMEGLRPDKFTYNSLLTYFC-KAGDIKKAADIVQTMASDGCEPDIVTYGTLIA 589
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 140/324 (43%), Gaps = 36/324 (11%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI+ KLG+ A +V N+ + C N TY I L + + A + +
Sbjct: 340 NSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTG 399
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G LPD +I C A +Y + K +P + LI SLC + ++
Sbjct: 400 KGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGK-LQ 458
Query: 321 LALDMLDDF--SGEARKYAIK---------------------------------PFSSVI 345
AL++L + SG AR ++++I
Sbjct: 459 EALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLI 518
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
LC+ + V A L+ +MI EG P +NS+++ + KAGD+ A ++++ M S G +
Sbjct: 519 DGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCE 578
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
PD+ TY L++G G++E A ++L + L+P Y+ +I+ + + A++L
Sbjct: 579 PDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRL 638
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLC 489
EM + P+ Y + + LC
Sbjct: 639 FREMIEKAEAPDAVTYKIVFRGLC 662
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 125/283 (44%), Gaps = 15/283 (5%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI F K + A E+F++ G N TY I+ L + + + A + ++MI
Sbjct: 480 NTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIM 539
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEA-HVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
G PD ++++FCK G K+A +V T+A + P LI+ LC+ V
Sbjct: 540 EGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDG-CEPDIVTYGTLIAGLCKAGR-V 597
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
+ A +L + ++ VI++L R K A L +MI + P + V
Sbjct: 598 EAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIV 657
Query: 380 ISAYSKAGD-MTPAMEMLKLMRSRGLKPDVYTY----TGLMSGYANGGQMEEACEILNEA 434
+ G + A++ + M RG P+ ++ GL S G ++ ++ +A
Sbjct: 658 FRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLAMVGTLIKLIDMVMEKA 717
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
K + + + T+IRG+ K+ ++ AL L + D +PN
Sbjct: 718 KFSDNEV------TMIRGFLKISKYQDALATLGGILD-SRKPN 753
>gi|414868428|tpg|DAA46985.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
Length = 683
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/442 (24%), Positives = 182/442 (41%), Gaps = 78/442 (17%)
Query: 142 PLVLGENLVCFFKWVTSGVVDALLKAICSSVGK----KEVYALWDIVKEIGEKEKGVLTV 197
P+VL LV + V + LL A+ S G+ + ++ V +G + +
Sbjct: 125 PVVLSAALVADVRSCGCEVSEELLCALVESWGRLGLAHYAHEVFVQVPRLGLRP----ST 180
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
I N +IA + G AA+ F + GC + TY + + RR I D A + ++
Sbjct: 181 AIYNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTLVHGVCRRGIVDEALRLVKQ 240
Query: 258 MIETGSLPDSEKVGKIISWFC-----------------KGGKAKEA------HVVYTLAR 294
M G P+ ++ FC KG A EA H +
Sbjct: 241 MERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATYRSLVHGAFRCLE 300
Query: 295 EKKMY----------PPQSVVAF--LISSLCQED---ETVKLA----------------- 322
+++ Y P +A+ L+ L + D E V+LA
Sbjct: 301 KERAYRMLSEWIESDPTLHSIAYHTLLYCLSKNDMDKEAVELAKKMSKRGYLLGSTTFSI 360
Query: 323 --------------LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
+++DDF + + +I+S R KD+ A S+M+S+G
Sbjct: 361 VIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDG 420
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
+N VI ++KAG++ A+E +K+M+ G P++ T+ L++GY G + +A
Sbjct: 421 LLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAK 480
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
L ++ +T+ +LI G C + D A +EM + GV+PNV YN LI L
Sbjct: 481 AFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGL 540
Query: 489 CLKALDWRTAEKLLEDMRLKGL 510
C A A +LL M++ G+
Sbjct: 541 C-SAGHVSKAIELLNKMKMDGI 561
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 126/303 (41%), Gaps = 19/303 (6%)
Query: 190 KEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
K+ G L ++ +I F + A + F++ G +++ E+Y I+ ++ +
Sbjct: 383 KKGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVE 442
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A + M E+G P+ +I+ + K G +A + E + P LI
Sbjct: 443 RALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLI 502
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
LC + + A + + S + ++ ++ +I LC V A LL+KM +G
Sbjct: 503 DGLCHTHQ-LDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGI 561
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
P FN+ I ++ + + A ++ M G+ PD YTY L+ + +++EA E
Sbjct: 562 TPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKE 621
Query: 430 ILNE-------AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
I+ K H TY ++ K+ F C NE V ++ +++
Sbjct: 622 IILAMESISCIGTKQH------TYWPVVGALTKMGRFRC-----NEFGLVPLKTYSEQFG 670
Query: 483 KLI 485
L+
Sbjct: 671 HLV 673
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 95/189 (50%), Gaps = 3/189 (1%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+++VI + R V A +M ++G P +N+++ + G + A+ ++K M
Sbjct: 183 YNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTLVHGVCRRGIVDEALRLVKQME 242
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G++P+V TYT L+ G+ N ++EEA +L K+ + TY +L+ G + E +
Sbjct: 243 RAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATYRSLVHGAFRCLEKE 302
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
A ++L+E + + Y+ L+ L +D + A +L + M +G L T +++
Sbjct: 303 RAYRMLSEWIESDPTLHSIAYHTLLYCLSKNDMD-KEAVELAKKMSKRGYLLGSTTFSIV 361
Query: 521 R--AVKELE 527
AVK LE
Sbjct: 362 IPCAVKVLE 370
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 84/189 (44%), Gaps = 38/189 (20%)
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+++ S R+ H A + ++ G P A++N+VI+A +AG + A + M +
Sbjct: 150 ALVESWGRLGLAHYAHEVFVQVPRLGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPAD 209
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G +PD +TY +TL+ G C+ D A
Sbjct: 210 GCRPDCFTY-----------------------------------NTLVHGVCRRGIVDEA 234
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIR 521
L+L+ +M+ G++PNV Y L+ C A A +LE M+ KG+ T R+L+
Sbjct: 235 LRLVKQMERAGIRPNVVTYTMLVDGFC-NASRVEEAVCVLERMKEKGVSATEATYRSLVH 293
Query: 522 -AVKELEED 529
A + LE++
Sbjct: 294 GAFRCLEKE 302
>gi|414868427|tpg|DAA46984.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
Length = 674
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/442 (24%), Positives = 182/442 (41%), Gaps = 78/442 (17%)
Query: 142 PLVLGENLVCFFKWVTSGVVDALLKAICSSVGK----KEVYALWDIVKEIGEKEKGVLTV 197
P+VL LV + V + LL A+ S G+ + ++ V +G + +
Sbjct: 125 PVVLSAALVADVRSCGCEVSEELLCALVESWGRLGLAHYAHEVFVQVPRLGLRP----ST 180
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
I N +IA + G AA+ F + GC + TY + + RR I D A + ++
Sbjct: 181 AIYNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTLVHGVCRRGIVDEALRLVKQ 240
Query: 258 MIETGSLPDSEKVGKIISWFC-----------------KGGKAKEA------HVVYTLAR 294
M G P+ ++ FC KG A EA H +
Sbjct: 241 MERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATYRSLVHGAFRCLE 300
Query: 295 EKKMY----------PPQSVVAF--LISSLCQED---ETVKLA----------------- 322
+++ Y P +A+ L+ L + D E V+LA
Sbjct: 301 KERAYRMLSEWIESDPTLHSIAYHTLLYCLSKNDMDKEAVELAKKMSKRGYLLGSTTFSI 360
Query: 323 --------------LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
+++DDF + + +I+S R KD+ A S+M+S+G
Sbjct: 361 VIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDG 420
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
+N VI ++KAG++ A+E +K+M+ G P++ T+ L++GY G + +A
Sbjct: 421 LLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAK 480
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
L ++ +T+ +LI G C + D A +EM + GV+PNV YN LI L
Sbjct: 481 AFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGL 540
Query: 489 CLKALDWRTAEKLLEDMRLKGL 510
C A A +LL M++ G+
Sbjct: 541 C-SAGHVSKAIELLNKMKMDGI 561
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 106/242 (43%), Gaps = 1/242 (0%)
Query: 190 KEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
K+ G L ++ +I F + A + F++ G +++ E+Y I+ ++ +
Sbjct: 383 KKGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVE 442
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A + M E+G P+ +I+ + K G +A + E + P LI
Sbjct: 443 RALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLI 502
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
LC + + A + + S + ++ ++ +I LC V A LL+KM +G
Sbjct: 503 DGLCHTHQ-LDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGI 561
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
P FN+ I ++ + + A ++ M G+ PD YTY L+ + +++EA E
Sbjct: 562 TPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKE 621
Query: 430 IL 431
I+
Sbjct: 622 II 623
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 95/189 (50%), Gaps = 3/189 (1%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+++VI + R V A +M ++G P +N+++ + G + A+ ++K M
Sbjct: 183 YNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTLVHGVCRRGIVDEALRLVKQME 242
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G++P+V TYT L+ G+ N ++EEA +L K+ + TY +L+ G + E +
Sbjct: 243 RAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATYRSLVHGAFRCLEKE 302
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
A ++L+E + + Y+ L+ L +D + A +L + M +G L T +++
Sbjct: 303 RAYRMLSEWIESDPTLHSIAYHTLLYCLSKNDMD-KEAVELAKKMSKRGYLLGSTTFSIV 361
Query: 521 R--AVKELE 527
AVK LE
Sbjct: 362 IPCAVKVLE 370
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 106/262 (40%), Gaps = 15/262 (5%)
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
E+ + F G + Y I++ R K A +M+ G L E +I F
Sbjct: 376 ELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCF 435
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDD---FSGEAR 334
K G+ + A + +E P LI+ L L + D F
Sbjct: 436 AKAGEVERALETIKVMQESGFSPNLVTFNTLINGY--------LKLGNVHDAKAFLKMVM 487
Query: 335 KYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
++ + P F+S+I LC + A S+M G P +N +I AG ++
Sbjct: 488 EHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVS 547
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A+E+L M+ G+ PD Y++ + + ++E+A ++ N+ + TY+ LI
Sbjct: 548 KAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALI 607
Query: 451 RGYCKLEEFDCALKLLNEMKDV 472
+ C D A +++ M+ +
Sbjct: 608 KALCDERRVDEAKEIILAMESI 629
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 84/189 (44%), Gaps = 38/189 (20%)
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+++ S R+ H A + ++ G P A++N+VI+A +AG + A + M +
Sbjct: 150 ALVESWGRLGLAHYAHEVFVQVPRLGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPAD 209
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G +PD +TY +TL+ G C+ D A
Sbjct: 210 GCRPDCFTY-----------------------------------NTLVHGVCRRGIVDEA 234
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIR 521
L+L+ +M+ G++PNV Y L+ C A A +LE M+ KG+ T R+L+
Sbjct: 235 LRLVKQMERAGIRPNVVTYTMLVDGFC-NASRVEEAVCVLERMKEKGVSATEATYRSLVH 293
Query: 522 -AVKELEED 529
A + LE++
Sbjct: 294 GAFRCLEKE 302
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 3/113 (2%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
AF F++ ++G N +TY I L A + KM G PD+ I
Sbjct: 514 AFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPIL 573
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDM 325
FC+ K ++A ++ + P LI +LC E DE ++ L M
Sbjct: 574 SFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILAM 626
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 124/271 (45%), Gaps = 7/271 (2%)
Query: 246 KIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVV 305
IFD WS + + D + S F + G +EA+ ++ R + P
Sbjct: 144 NIFDMLWSTRNICVSGSGVFDV-----LFSVFVELGLLEEANECFSRMRNFRTLPKARSC 198
Query: 306 AFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI 365
FL+ L + +L +D G ++ ++ +I LC+ D+ ++ L +M
Sbjct: 199 NFLLHRLSKSGNG-QLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMR 257
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
G P +NS+I Y K G + + M+ G PD+ TY GL++ Y +M
Sbjct: 258 EMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMP 317
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
A E +E K N + + VTY TLI +CK A+KLL +M+ G+ PN Y LI
Sbjct: 318 RAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLI 377
Query: 486 QSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ C KA + A KLL DM G+ LN +T
Sbjct: 378 DANC-KAGNLTEAWKLLNDMLQAGVKLNIVT 407
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 132/289 (45%), Gaps = 1/289 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI + K+G + +FN+ D GCV + TY I + + A+ +M
Sbjct: 269 NSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKN 328
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ +I FCK G + A + R + P + LI + C+ +
Sbjct: 329 NGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTE 388
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A +L+D K I +++++ LC+ + A+ + M+ +G P V+ +++
Sbjct: 389 -AWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALV 447
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
Y KA M AM++LK M +KPD+ Y ++ G+ + ++EE IL E K
Sbjct: 448 HGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGIS 507
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+PV T+I Y K + AL EM+DVGV+ + Y LI LC
Sbjct: 508 ANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLC 556
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 145/320 (45%), Gaps = 2/320 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+ SK G G+ + FN G + TY I+ L + + + + +M E
Sbjct: 199 NFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMRE 258
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD +I + K G +E ++ ++ P LI+ C+ ++ +
Sbjct: 259 MGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPR 318
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A + + K + +S++I + C+ + GA LL M G P + S+I
Sbjct: 319 -AFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLI 377
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
A KAG++T A ++L M G+K ++ TYT L+ G G+M EA E+ K+
Sbjct: 378 DANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGIS 437
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+ Y L+ GY K E + A+K+L +M + ++P++ Y +I C + +
Sbjct: 438 PNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQR-KLEETKL 496
Query: 501 LLEDMRLKGLHLNGITRALI 520
+LE+M+ +G+ N + I
Sbjct: 497 ILEEMKSRGISANPVISTTI 516
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 130/314 (41%), Gaps = 5/314 (1%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L+ A C + E + L + + + G K V +L+ L K G+ A EVF
Sbjct: 375 SLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGL----CKAGRMIEAEEVFRS 430
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G NQ+ Y + + + + A + ++M E PD G II C K
Sbjct: 431 MLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRK 490
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+E ++ + + + + +I + + ++ AL+ + + I +
Sbjct: 491 LEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSD-ALNFFQEMQDVGVEATIVTYC 549
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+I LC V A +M+S G P AV+ S+I + A ++ M+ R
Sbjct: 550 VLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCR 609
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G+ PD+ +T L+ G G ++EA +++ + Y +L+ G+ + E A
Sbjct: 610 GMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQA 669
Query: 463 LKLLNEMKDVGVQP 476
K NEM + G+ P
Sbjct: 670 RKFFNEMIEKGILP 683
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 133/343 (38%), Gaps = 37/343 (10%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F K G + A ++ G + N+ TY I+A + AW + M++ G
Sbjct: 341 LIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAG 400
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+ ++ CK G+ EA V+ + + P Q V L+ + E ++ A
Sbjct: 401 VKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKA-ERMEDA 459
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+ +L + K + + S+I C + + K +L +M S G + ++I A
Sbjct: 460 MKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDA 519
Query: 383 YSKAGDMTPAMEMLKLMR-----------------------------------SRGLKPD 407
Y KAG + A+ + M+ S GL+P+
Sbjct: 520 YFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPN 579
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
V YT L+ G +E A ++ +E + + LI G K AL L++
Sbjct: 580 VAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLIS 639
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
M ++ ++ ++ Y L+ + + A K +M KG+
Sbjct: 640 RMTELAIEFDLHVYTSLVSGFS-QCGELHQARKFFNEMIEKGI 681
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 142/309 (45%), Gaps = 2/309 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+ K K + A + + + GC+ + TY I+ +R + A + + I
Sbjct: 188 NTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIF 247
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G +PD +I+ C G + A ++ A+ K + P V L+ LC++ +
Sbjct: 248 KGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILH 307
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
AL ++++ + I ++ VI LC+M ++ A +++ I +G P FN++I
Sbjct: 308 -ALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMI 366
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
Y K + A+++++ M G+ PD TY +++G G+ +E E E R
Sbjct: 367 DGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCR 426
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+ +TY+ LI +CK+ + + A ++ M G+ P+ +N LI C D A
Sbjct: 427 PNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNG-DLDGAYL 485
Query: 501 LLEDMRLKG 509
L + + KG
Sbjct: 486 LFQKLDEKG 494
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 134/306 (43%), Gaps = 9/306 (2%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
F G+ A + + GC Y + L A + ++M+ PD
Sbjct: 55 FCITGRPHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPD 114
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLAL 323
++ C+ G E+ + ++ M + I LC+ +E V L
Sbjct: 115 VATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVE 174
Query: 324 DMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAY 383
M + + Y ++++R LC+ V A L +M+++G P + +N++I Y
Sbjct: 175 SMDAYIAPDVVTY-----NTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGY 229
Query: 384 SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
K + A E+LK +G PD TY L++G G +E A E+ NEA+ +
Sbjct: 230 CKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDL 289
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
V Y++L++G C+ AL+++NEM + G P++ YN +I LC K + A ++
Sbjct: 290 VVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLC-KMGNISDAAVVMN 348
Query: 504 DMRLKG 509
D +KG
Sbjct: 349 DAIVKG 354
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 119/278 (42%), Gaps = 1/278 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I K+G A V N G + + T+ I+ +R D A + E+M
Sbjct: 328 NIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWM 387
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD+ +++ CK GKAKE + + K P LI + C+ ++ ++
Sbjct: 388 YGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQ-LE 446
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A ++ S + F+++I CR D+ GA L K+ +G FN +I
Sbjct: 447 EASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILI 506
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
AYS +M A ++ M S+G KPD+YTY L+ G ++ A L E
Sbjct: 507 GAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFV 566
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
S T+ ++ A+ +++ M +GV P V
Sbjct: 567 PSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPEV 604
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 81/175 (46%), Gaps = 6/175 (3%)
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G PP +N+++ A A ++ M S G+ PD T+T + + G+ A
Sbjct: 5 GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRG-YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
+L + + P+ Y T++RG Y +D A L +EM V P+V +N ++
Sbjct: 65 LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYD-ARHLFDEMLRRDVFPDVATFNNVLH 123
Query: 487 SLCLKALDWRTAEKLLEDMRLKGLHLNGITRAL-IRAVKELEEDAIENGEALVEA 540
+LC K D + LL + +G+ +N T + IR + E +E ALVE+
Sbjct: 124 ALCQKG-DIMESGALLAKVLKRGMSVNKFTCNIWIRGL--CEGGRLEEAVALVES 175
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 149/327 (45%), Gaps = 12/327 (3%)
Query: 189 EKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
EKE V LI FS +GK + A +F + + G A+ Y I R
Sbjct: 287 EKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNV 346
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
A + ++M + G +P + G +I CK G+ + A ++ + K + + L
Sbjct: 347 KRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTL 406
Query: 309 ISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI 365
I C+ DE ++L + M + + + ++S+ LC++ AK LL M+
Sbjct: 407 IDGYCESGMVDEALRLQVVM----EKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMV 462
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
G P F ++I Y K G+ A + + M +G P++ TY L+ GY+ G M+
Sbjct: 463 ERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMK 522
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
EA ++ +E + T +LI G C + D ALKL +EM G+ PNV Y +I
Sbjct: 523 EAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMI 582
Query: 486 QSLCLKALDWRTAE--KLLEDMRLKGL 510
L + D R+ E KL ++M+ GL
Sbjct: 583 SGL---SKDGRSEEAFKLYDEMKETGL 606
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 1/185 (0%)
Query: 305 VAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM 364
+ ++ LC+ + V++ ++D+ + + K + +++ I + D+ G +L+ M
Sbjct: 228 LTIVLDGLCKRGD-VEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLM 286
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
EG + +I +S G + A + + MR +G++ DVY YT ++S G +
Sbjct: 287 EKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNV 346
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
+ A + +E S TY LI G CK + + A L+NEM+ G+ N +N L
Sbjct: 347 KRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTL 406
Query: 485 IQSLC 489
I C
Sbjct: 407 IDGYC 411
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 1/129 (0%)
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
A + G + + + M + ++ VY+ T ++ G G +E ++++E +
Sbjct: 199 ALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKA 258
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+ VTY+ I GY K + ++L M+ GV NV Y LI A++L
Sbjct: 259 NVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFS-NIGKIEEAQRL 317
Query: 502 LEDMRLKGL 510
E+MR KG+
Sbjct: 318 FEEMREKGI 326
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 156/342 (45%), Gaps = 13/342 (3%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
LL A C + G ++ L D ++ G E ++T N LI G A + +
Sbjct: 203 LLDATCKASGYRQAMVLLDEMRAKG-CEPDIVT---YNVLINAMCNEGDVDEALNILSDL 258
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
+GC + TY +++L + + + +M PD I++ C+ G
Sbjct: 259 PSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLV 318
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP--- 340
A V E P + ++ LC V A+++L + Y KP
Sbjct: 319 DRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGR-VDDAVELLSRL----KSYGCKPDTI 373
Query: 341 -FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
+++V++ LC ++ A+ L+++M+ PP FN+VI++ + G + A+++++ M
Sbjct: 374 AYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQM 433
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
G PD+ TY ++ G N +++A E+L+ + + VT++TL++G C ++ +
Sbjct: 434 SENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRW 493
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+ A +L+ M P+ +N +I SLC K L + E L
Sbjct: 494 EDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETL 535
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 155/323 (47%), Gaps = 9/323 (2%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFT--IEALSRRKIFDWAWS 253
TV N ++ + + G+ + A + + G +T+ F I AL R A +
Sbjct: 129 TVVTYNTMVNGYCRAGRIEDARRLIS-----GMPFPPDTFTFNPLIRALCVRGRVPDALA 183
Query: 254 VCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC 313
V + M+ G P ++ CK ++A V+ R K P LI+++C
Sbjct: 184 VFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMC 243
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
E + V AL++L D K ++ V++SLC + + L ++M S P
Sbjct: 244 NEGD-VDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDE 302
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
FN+++++ + G + A++++ M G PD+ TY+ ++ G + G++++A E+L+
Sbjct: 303 VTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSR 362
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
K + + Y T+++G C +E+++ A +L+ EM P+ +N +I SLC K L
Sbjct: 363 LKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGL 422
Query: 494 DWRTAEKLLEDMRLKGLHLNGIT 516
R A K++E M G + + +T
Sbjct: 423 VDR-AIKVVEQMSENGCNPDIVT 444
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 138/324 (42%), Gaps = 37/324 (11%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
+G+ A E+ ++ YGC + Y ++ L + ++ A + +M+ + PD
Sbjct: 347 LCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPD 406
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
+I+ C+ G A V E P +I LC E + A+++L
Sbjct: 407 EVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNE-RCIDDAMELL 465
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
+ K I F+++++ LC + A+ L+ M+ PP FN+VI++ +
Sbjct: 466 SNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQK 525
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYT----------------GLMSGYANG--------- 421
G + A+E LK+M G P+ TY L+SG NG
Sbjct: 526 GLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNGTPDLITYNT 585
Query: 422 --------GQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
G+MEEA ++L N +TY +L G C+ + D A+++L ++D+G
Sbjct: 586 VISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMG 645
Query: 474 VQPNVDEYNKLIQSLCLKALDWRT 497
+ P+ YN ++ C +WRT
Sbjct: 646 LSPDATFYNDILLGFC---QNWRT 666
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 152/348 (43%), Gaps = 14/348 (4%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ A+C+ E + + G K V +L L + K E+F
Sbjct: 236 NVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGS----ERWKEVEELFA 291
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ C ++ T+ + +L ++ + D A V + M E G +PD I+ C G
Sbjct: 292 EMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVG 351
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
+ +A V L+R K +A+ ++ LC ++ M + + +
Sbjct: 352 RVDDA--VELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVT 409
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
F++VI SLC+ V A ++ +M G P +NS+I + AME+L +
Sbjct: 410 -FNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNL 468
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLE 457
+S G KPD+ T+ L+ G + + E+A +++ HS P T++T+I C+
Sbjct: 469 QSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLM--VNMMHSDCPPDATTFNTVITSLCQKG 526
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
A++ L M + G PN YN ++ +L LKA + A KLL M
Sbjct: 527 LLLQAIETLKIMAENGCIPNQSTYNIVVDAL-LKAGKTQEALKLLSGM 573
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 84/232 (36%), Gaps = 38/232 (16%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N +I + G A E + GC+ NQ TY ++AL + A + M
Sbjct: 515 FNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGM- 573
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
T PD +IS K GK +EA + + + P L +C+ED T
Sbjct: 574 -TNGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTD 632
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
+ IR LCR++D+ G P +N +
Sbjct: 633 R-----------------------AIRMLCRLQDM-------------GLSPDATFYNDI 656
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+ + + A++ M S G PD TY L+ A ++EA ++L
Sbjct: 657 LLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLL 708
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGP-----PPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
+RSL + +++ A L+ + S G P N +I G + A + +
Sbjct: 65 LRSLIQREEIDDALALVDSIASGGGSGKCLPLPVVPCNILIKRLCSGGRVADAERVFATL 124
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
G V TY +++GY G++E+A +++ T++ LIR C
Sbjct: 125 ---GASATVVTYNTMVNGYCRAGRIEDARRLISGMPFPPDTF---TFNPLIRALCVRGRV 178
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RA 518
AL + ++M G P+V Y+ L+ + C KA +R A LL++MR KG + +T
Sbjct: 179 PDALAVFDDMLHRGCSPSVVTYSILLDATC-KASGYRQAMVLLDEMRAKGCEPDIVTYNV 237
Query: 519 LIRAV 523
LI A+
Sbjct: 238 LINAM 242
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 80/195 (41%), Gaps = 13/195 (6%)
Query: 134 FVLKVLETPLVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKG 193
+L+ +ET ++ EN + + VVDALLKA GK + + +K + G
Sbjct: 527 LLLQAIETLKIMAENGCIPNQSTYNIVVDALLKA-----GKTQ-----EALKLLSGMTNG 576
Query: 194 VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWS 253
+ N +I+ +K GK + A ++ G + TY + R D A
Sbjct: 577 TPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIR 636
Query: 254 VCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSL- 312
+ ++ + G PD+ I+ FC+ + A + P +S L+ +L
Sbjct: 637 MLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALA 696
Query: 313 --CQEDETVKLALDM 325
C DE +L +++
Sbjct: 697 YECLLDEAKQLLVNL 711
>gi|297736961|emb|CBI26162.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 153/346 (44%), Gaps = 37/346 (10%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
L I K G + A VF + G A+ T+ + R D+ W + +M+
Sbjct: 195 LEAYIRCLCKGGLVEEAISVFGQLKGIGVCASIATWNSVLRGSVRAGRIDFVWELYGEMV 254
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
E+ + D VG ++ FC + + H + E + P + LIS C++
Sbjct: 255 ESSVVADVHTVGYLVQAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYG 314
Query: 320 KLALDML----------DDFSGEA-----------------------RKYAIKP--FSSV 344
+++ D+L D F+ + R YA ++++
Sbjct: 315 RVS-DLLHSMIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTM 373
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
I LCRMK + A+ L +MI +G P +N++I Y K G++ A +M + M +G
Sbjct: 374 IHGLCRMKWLGDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGY 433
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
+Y ++ G + G+++EA ++ E + +TY+ L+RG+CK +
Sbjct: 434 GEKTVSYNVMIKGLCSHGKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGAN 493
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
LL E+ D G+QP+ Y LI LC + D + A+ L +DM+ +G+
Sbjct: 494 LLYELLDQGIQPSAASYAPLIDKLCQEG-DMQNAKILWDDMQNRGM 538
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 132/290 (45%), Gaps = 1/290 (0%)
Query: 202 ELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET 261
E++ K GKG F VF D G ++ Y I L R K A + +MI+
Sbjct: 337 EVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGDARKLWFEMIQK 396
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
G LP+ +I + K G +EA +Y +K +I LC + +K
Sbjct: 397 GFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGLCSHGK-IKE 455
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A D+ ++ S + +++++R C+ + LL +++ +G P A + +I
Sbjct: 456 AHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQGIQPSAASYAPLID 515
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
+ GDM A + M++RG++P V T+ +++G+ G E E L ++ R
Sbjct: 516 KLCQEGDMQNAKILWDDMQNRGMEPAVCTHDFMITGFCKQGCAMEGMEWLTTMLRSKLRP 575
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
++ +LI+ +++ D AL +L+ M +G + ++ N L+ LC K
Sbjct: 576 QKKSFESLIQCLSQIDRLDDALLVLDSMLKIGFRLSISICNSLVTKLCEK 625
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 48/119 (40%)
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P A + I K G + A+ + ++ G+ + T+ ++ G G+++ E+
Sbjct: 190 PKPASLEAYIRCLCKGGLVEEAISVFGQLKGIGVCASIATWNSVLRGSVRAGRIDFVWEL 249
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
E ++ T L++ +C LL + + GV P +NKLI C
Sbjct: 250 YGEMVESSVVADVHTVGYLVQAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFC 308
>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 141/312 (45%), Gaps = 9/312 (2%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRR----KIFDWAWSVCEKM 258
++ +G+ A + N + G + + T I+A ++ ++ + W KM
Sbjct: 230 MVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFW----KM 285
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+E G P+ +I+ CK G K+A + + P LI LC++ T
Sbjct: 286 VEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWT 345
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
K L + K + ++++I C+ ++ A+ LLS+M +G P + +
Sbjct: 346 EKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTT 405
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I + K G+ A E++ LM G P++YTY ++ G G ++EA +LN+ +
Sbjct: 406 LIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHG 465
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
+ VTY L+ +C+ + + +L N+M VG P++ Y LI C + + +
Sbjct: 466 LQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFC-RQKQMKES 524
Query: 499 EKLLEDMRLKGL 510
E+L E+ GL
Sbjct: 525 ERLFEEAVSLGL 536
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 139/328 (42%), Gaps = 9/328 (2%)
Query: 163 ALLKAICSSVGKKEVYALW-DIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
L+ +C ++ + L+ +V+ G K V +I + K K A + +
Sbjct: 334 TLIDGLCKKGWTEKAFRLFLKLVRSDGYKPN----VHTYTAMINGYCKEDKLNRAEMLLS 389
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ + G V N TY I+ + F A+ + + M + G P+ II CK G
Sbjct: 390 RMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKG 449
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
EA+ + + L+S C++ +T + +L + I +
Sbjct: 450 SLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNR-SLVFFNKMLKVGFTPDIHSY 508
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+++I CR K + ++ L + +S G P + S+I Y + G+ + A+++ + M +
Sbjct: 509 TTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSN 568
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G PD TY L+SG ++++A + + VT TL YCK ++
Sbjct: 569 HGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSST 628
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A+ +L+ ++ + + N L++ LC
Sbjct: 629 AINVLDRLEK---RQWIRTVNTLVRKLC 653
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 111/241 (46%), Gaps = 15/241 (6%)
Query: 277 FCKGGKAKEA-HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLAL-DMLDDFSGEAR 334
F + GK KEA ++V + + + Q++ C D V + L ++ ++ E
Sbjct: 164 FAENGKLKEAVNMVVEMQNQGLVXSTQTLN-------CVLDVAVGMGLVEIAENMFVEMC 216
Query: 335 KYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
+ + P F ++ + C M V A+ L+ M+ G NA +I A+ + G +
Sbjct: 217 QRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVN 276
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
+ M GL P+V +T L++G G +++A E+L E + + + T+ TLI
Sbjct: 277 RVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLI 336
Query: 451 RGYCKLEEFDCALKL-LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
G CK + A +L L ++ G +PNV Y +I C K AE LL M+ +G
Sbjct: 337 DGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYC-KEDKLNRAEMLLSRMQEQG 395
Query: 510 L 510
L
Sbjct: 396 L 396
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 90/225 (40%), Gaps = 3/225 (1%)
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
E+ +K A++M+ + + + + + V+ M V A+ + +M G P
Sbjct: 166 ENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCV 225
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
F ++ A G + A + L M RG D T T ++ + G + +
Sbjct: 226 SFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKM 285
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
+ + + + LI G CK A +LL EM G +PNV + LI LC K
Sbjct: 286 VEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWT 345
Query: 495 WRTAEKLLEDMRLKGLHLNGIT-RALIRAVKELEEDAIENGEALV 538
+ L+ +R G N T A+I +ED + E L+
Sbjct: 346 EKAFRLFLKLVRSDGYKPNVHTYTAMINGY--CKEDKLNRAEMLL 388
>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
Length = 642
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 201/466 (43%), Gaps = 33/466 (7%)
Query: 42 LYRSSRFLSESPAANPKDESSFSPETDFSSRSFGENEYAQMDPSADAVESKEEEAYEIDG 101
LY++ FLS+ +P S S F+S S E+ ++P D + + +
Sbjct: 8 LYKNGDFLSDDSKCSPLSSSRTSVRWVFNSSSLPPPEW--IEPFNDVSDLVKSNRNLLPS 65
Query: 102 DKLENVLSLLQSSVDGYLESSLDSF----ELDLHEDFVLKVLETPLVLGENLVC--FFKW 155
+ +L+LL S +ES+LD F + L +FV VL++ + + + FF W
Sbjct: 66 PWVSQILNLLDGSAS--MESNLDGFCRKFLIKLSPNFVSFVLKSDEIREKPDIAWSFFCW 123
Query: 156 VTS------------GVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNEL 203
+VD L A K+V + + EI +K + +TV N L
Sbjct: 124 SRKQKKYTHNLECYVSLVDVLALA-------KDVDRIRFVSSEI-KKFEFPMTVSAANAL 175
Query: 204 IALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGS 263
I F KLG + V+ K + G TY F + L D A V E M E+G
Sbjct: 176 IKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVM-ESGR 234
Query: 264 L-PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+ PD +I +CK G+ ++A + E + + + + C D
Sbjct: 235 IKPDIVTYNTMIKGYCKAGQTQKA-MEKLRDMETRGHEADKITYMTMIQACYADSDFGSC 293
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+ + + + + FS VI LC+ ++ T+ MI +G P A++ +I
Sbjct: 294 VALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDG 353
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y+K+G + A+ +L M G KPDV TY+ +++G G++EEA + + + + ++
Sbjct: 354 YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAIN 413
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ Y +LI G K D A +L EM + G + YN LI +
Sbjct: 414 SMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAF 459
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 79/171 (46%), Gaps = 4/171 (2%)
Query: 323 LDMLDDFSGEARKY----AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+D + S E +K+ + +++I+S ++ V + KM G P +N
Sbjct: 150 VDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNF 209
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+++ A + A + ++M S +KPD+ TY ++ GY GQ ++A E L + +
Sbjct: 210 LMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRG 269
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+TY T+I+ +F + L EM + G+Q ++ +I LC
Sbjct: 270 HEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLC 320
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
L+ + G +EE + + K+N + TY+ L+ G D A ++ M+
Sbjct: 173 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 232
Query: 472 VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++P++ YN +I+ C KA + A + L DM +G + IT
Sbjct: 233 GRIKPDIVTYNTMIKGYC-KAGQTQKAMEKLRDMETRGHEADKIT 276
>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g03560, mitochondrial; Flags: Precursor
gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 201/466 (43%), Gaps = 33/466 (7%)
Query: 42 LYRSSRFLSESPAANPKDESSFSPETDFSSRSFGENEYAQMDPSADAVESKEEEAYEIDG 101
LY++ FLS+ +P S S F+S S E+ ++P D + + +
Sbjct: 26 LYKNGDFLSDDSKCSPLSSSRTSVRWVFNSSSLPPPEW--IEPFNDVSDLVKSNRNLLPS 83
Query: 102 DKLENVLSLLQSSVDGYLESSLDSF----ELDLHEDFVLKVLETPLVLGENLVC--FFKW 155
+ +L+LL S +ES+LD F + L +FV VL++ + + + FF W
Sbjct: 84 PWVSQILNLLDGSAS--MESNLDGFCRKFLIKLSPNFVSFVLKSDEIREKPDIAWSFFCW 141
Query: 156 VTS------------GVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNEL 203
+VD L A K+V + + EI +K + +TV N L
Sbjct: 142 SRKQKKYTHNLECYVSLVDVLALA-------KDVDRIRFVSSEI-KKFEFPMTVSAANAL 193
Query: 204 IALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGS 263
I F KLG + V+ K + G TY F + L D A V E M E+G
Sbjct: 194 IKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVM-ESGR 252
Query: 264 L-PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+ PD +I +CK G+ ++A + E + + + + C D
Sbjct: 253 IKPDIVTYNTMIKGYCKAGQTQKA-MEKLRDMETRGHEADKITYMTMIQACYADSDFGSC 311
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+ + + + + FS VI LC+ ++ T+ MI +G P A++ +I
Sbjct: 312 VALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDG 371
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y+K+G + A+ +L M G KPDV TY+ +++G G++EEA + + + + ++
Sbjct: 372 YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAIN 431
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ Y +LI G K D A +L EM + G + YN LI +
Sbjct: 432 SMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAF 477
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 79/171 (46%), Gaps = 4/171 (2%)
Query: 323 LDMLDDFSGEARKY----AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+D + S E +K+ + +++I+S ++ V + KM G P +N
Sbjct: 168 VDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNF 227
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+++ A + A + ++M S +KPD+ TY ++ GY GQ ++A E L + +
Sbjct: 228 LMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRG 287
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+TY T+I+ +F + L EM + G+Q ++ +I LC
Sbjct: 288 HEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLC 338
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
L+ + G +EE + + K+N + TY+ L+ G D A ++ M+
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 472 VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++P++ YN +I+ C KA + A + L DM +G + IT
Sbjct: 251 GRIKPDIVTYNTMIKGYC-KAGQTQKAMEKLRDMETRGHEADKIT 294
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 140/303 (46%), Gaps = 3/303 (0%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
F G+ A + + GC A Y + L A + ++M+ PD
Sbjct: 151 FCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPD 210
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
++ C+ G E+ + ++ M + I LC ED ++ A+ ++
Sbjct: 211 VATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLC-EDGRLEEAVALV 269
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
+ G + +++++R LC+ V A L +M+++G P + +N++I Y K+
Sbjct: 270 ERM-GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKS 328
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
G + A E+LK +G PD TY L++G G +E A E+ NEA+ + V Y
Sbjct: 329 GMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVY 388
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
++L++G C+ AL+++NEM + G P++ YN +I LC K + A ++ D
Sbjct: 389 NSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLC-KMGNISDAAVVMNDAI 447
Query: 507 LKG 509
+KG
Sbjct: 448 VKG 450
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 143/309 (46%), Gaps = 2/309 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+ K K + A + + + GC+ + TY I+ + + A + + +
Sbjct: 284 NTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVF 343
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G +PD +I+ C G + A ++ A+ K + P V L+ LC++ +
Sbjct: 344 KGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILH 403
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
AL ++++ E I ++ +I LC+M ++ A +++ I +G P FN++I
Sbjct: 404 -ALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLI 462
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
Y K + A+++++ M + G+ PDV TY +++G G+ +E E E R
Sbjct: 463 DGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCR 522
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+ +TY+ LI +CK+ + + A ++ M G+ P+ +N LI C D A
Sbjct: 523 PNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNG-DLDGAYL 581
Query: 501 LLEDMRLKG 509
L + + KG
Sbjct: 582 LFQKLDEKG 590
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 143/345 (41%), Gaps = 42/345 (12%)
Query: 204 IALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGS 263
I +++ G+ +AA + F + + C Y ++AL D A V +M+ G
Sbjct: 78 IQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGV 137
Query: 264 LPDSEKVGKIISWFCKGGKAKEAHVVYTLAR---EKKMYPPQSVVAFLISSLCQEDETVK 320
PD+ + FC G+ HV L R E+ + ++ L
Sbjct: 138 APDARTHTVRLKSFCLTGR---PHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYN 194
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG------------ 368
A + D+ G + F++V+ +LC+ DV + LL+K++ G
Sbjct: 195 -ARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWI 253
Query: 369 ----------------------PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
P +N+++ K + A + L M ++G P
Sbjct: 254 RGLCEDGRLEEAVALVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIP 313
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
D +TY ++ GY G ++EA E+L +A VTY +LI G C + + AL+L
Sbjct: 314 DDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELF 373
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH 511
NE + ++P++ YN L++ LC + L A +++ +M +G H
Sbjct: 374 NEAQAKDLKPDLVVYNSLVKGLCRQGLILH-ALQVMNEMVEEGCH 417
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 119/308 (38%), Gaps = 53/308 (17%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I K+G A V N G + + T+ I+ +R D A + E+M
Sbjct: 424 NIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWT 483
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC---QEDE 317
G PD +++ CK GKAKE + + K P LI + C Q +E
Sbjct: 484 YGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEE 543
Query: 318 TVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
+ + M D + P F+++I CR D+ GA L K+ +G
Sbjct: 544 ASGVIVRMCQD--------GLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATA 595
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
FN +I AYS +M A ++ M S+G KPD+YT
Sbjct: 596 DTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYT----------------------- 632
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
Y L+ G CK D A L EM G P++ + +++ L A+
Sbjct: 633 ------------YRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLN---LLAM 677
Query: 494 DWRTAEKL 501
+ R +E +
Sbjct: 678 NHRVSEAV 685
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 9/212 (4%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N ++ K GK K E F + GC N TY IE + + A V +M +
Sbjct: 494 NSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQ 553
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G +PD+ +I FC+ G A++++ EK LI + + K
Sbjct: 554 DGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAY-----SSK 608
Query: 321 LALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
L + M + GE KP + ++ LC+ +V A L++MIS+G P A F
Sbjct: 609 LNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATF 668
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
+++ + ++ A+ ++ +M G+ P+V
Sbjct: 669 GRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEV 700
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 99/224 (44%), Gaps = 11/224 (4%)
Query: 323 LDMLDDFSGEARKY----AIKP-FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
LD +D AR + +++P + + I++ R + A +M PP +N
Sbjct: 51 LDDVDAALASARSHLAPDSLQPLYVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYN 110
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+++ A A A ++ M + G+ PD T+T + + G+ A +L +
Sbjct: 111 AIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSER 170
Query: 438 HSRLSPVTYHTLIRG-YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
P Y T++RG Y ++ A L +EM V P+V +N ++ +LC K D
Sbjct: 171 GCDAKPAAYCTVVRGLYAHGHGYN-ARHLFDEMLGRDVFPDVATFNNVLHALCQKG-DVM 228
Query: 497 TAEKLLEDMRLKGLHLNGITRAL-IRAVKELEEDAIENGEALVE 539
+ LL + +G+ N T + IR + E+ +E ALVE
Sbjct: 229 ESGALLAKVLKRGMSANKFTCNIWIRGL--CEDGRLEEAVALVE 270
>gi|224120112|ref|XP_002331139.1| predicted protein [Populus trichocarpa]
gi|222872867|gb|EEF09998.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 146/303 (48%), Gaps = 10/303 (3%)
Query: 191 EKGV-LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
EKG+ + + +I K+G K AF +F++ + G VAN TY I+ + + +
Sbjct: 29 EKGIKADIHVYTVVINWNCKIGNTKRAFALFDELTEKGLVANVHTYGALIDGVCKAGEME 88
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQ----SVV 305
A + +M G + +I +CK G EA V + EKK + + +
Sbjct: 89 AAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLIDEAFKVQVIM-EKKGFENDIYTLNTI 147
Query: 306 AFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI 365
A + L Q +E + L M++ + + ++++I C+ + AK L +M
Sbjct: 148 ADGLRKLNQPEEAKRWLLTMIE----KGVVPNVVSYTTLIDIYCKEGNFVEAKKLFQEMK 203
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
G P +N +I +SK G M A E+ MR++G+ PD+YTYT L+ G G+++
Sbjct: 204 KAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGIFPDIYTYTSLLHGECIFGKLD 263
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
+A E+ NE ++ L+ VTY +I G K + A KL +EM + G+ P+ Y L+
Sbjct: 264 DAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSEEAFKLYDEMTEAGLTPDDRVYTSLV 323
Query: 486 QSL 488
SL
Sbjct: 324 SSL 326
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 122/284 (42%), Gaps = 39/284 (13%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
+I W GK E ++ EK + V +I+ C+ T K A + D+ + +
Sbjct: 7 LIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNT-KRAFALFDELTEK 65
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
+ + ++I +C+ ++ A+ L+++M + G ++N++I Y K G + A
Sbjct: 66 GLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLIDEA 125
Query: 393 MEMLKLMRSRGLK-----------------------------------PDVYTYTGLMSG 417
++ +M +G + P+V +YT L+
Sbjct: 126 FKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTLIDI 185
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
Y G EA ++ E KK + VTY+ LI G+ K A +L +EM+ G+ P+
Sbjct: 186 YCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGIFPD 245
Query: 478 VDEYNKLIQSLCL-KALDWRTAEKLLEDMRLKGLHLNGITRALI 520
+ Y L+ C+ LD A +L ++R KGL LN +T I
Sbjct: 246 IYTYTSLLHGECIFGKLD--DAVELFNEVRQKGLPLNVVTYTAI 287
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%)
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
A + +I + +G + M + M +G+K D++ YT +++ G + A + +E
Sbjct: 2 ATYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDE 61
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
+ + TY LI G CK E + A L+NEM+ G+ N YN LI C + L
Sbjct: 62 LTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGL 121
>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 143/324 (44%), Gaps = 34/324 (10%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N LI + K K A + NK ++GCV + +Y ++AL +R++ A + M
Sbjct: 216 FNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMK 275
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---D 316
G P+ ++ +C+ G KEA V + + P L++ C + D
Sbjct: 276 SKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKID 335
Query: 317 ETVKL-----ALDMLDDFSG----------------------EARKYAIK----PFSSVI 345
E ++ +++L D E K +K ++ ++
Sbjct: 336 EAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIIL 395
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
+ +C+ ++ A T L KM G P +N++I AY KAG M A M+ M S+GLK
Sbjct: 396 KWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLK 455
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
D +T ++ +++EA +L A K L V+Y LI GY K E+ D AL L
Sbjct: 456 IDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNL 515
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLC 489
+EMK+ + P+ YN +I LC
Sbjct: 516 WDEMKERQIMPSTITYNSVIGGLC 539
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 155/387 (40%), Gaps = 44/387 (11%)
Query: 184 VKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALS 243
V EI + + TV N L+ F GK AF + ++ + + TY I+ S
Sbjct: 305 VIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCS 364
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS 303
+ + +S+ E+M + G ++ I+ W CK G EA E + P
Sbjct: 365 QWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCV 424
Query: 304 VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLL-- 361
LI + C+ + K A M+D+ + + K ++++ LC K + A LL
Sbjct: 425 TYNTLIGAYCKAGKMGK-AFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCS 483
Query: 362 ---------------------------------SKMISEGPPPGNAVFNSVISAYSKAGD 388
+M P +NSVI ++
Sbjct: 484 ASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRK 543
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHT 448
+ A++ L M GL PD TY ++ G+ G +E+A + NE +N + T +
Sbjct: 544 VDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNI 603
Query: 449 LIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLK 508
L+RG C+ + ALKL N + G +V YN +I SLC K + A LL +M K
Sbjct: 604 LLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLC-KEGKFENAYDLLTEMEAK 662
Query: 509 GLHLNGITRALIRA-------VKELEE 528
L + T +I A +KE EE
Sbjct: 663 KLGPDQYTYKVIIAALTDAGRIKEAEE 689
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 144/361 (39%), Gaps = 38/361 (10%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ C+ E + + D + EK + V N LI S+ + +
Sbjct: 322 NMLVNGFCNDGKIDEAFRIRDEM----EKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIE 377
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ G N TY ++ + ++ A + +KM E G PD +I +CK G
Sbjct: 378 EMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAG 437
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALD------MLDDFS-- 330
K +A + K + + ++ LC E DE L +LD+ S
Sbjct: 438 KMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYG 497
Query: 331 -------------------GEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISE 367
E ++ I P ++SVI LC+ + V A L++M+
Sbjct: 498 ILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLEN 557
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P +N +I + G++ A + M KPDVYT L+ G G +E+A
Sbjct: 558 GLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKA 617
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
++ N + VTY+T+I CK +F+ A LL EM+ + P+ Y +I +
Sbjct: 618 LKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAA 677
Query: 488 L 488
L
Sbjct: 678 L 678
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 94/180 (52%), Gaps = 1/180 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F+ +I C V A ++KM G P +N+++ A K + A ++L M+
Sbjct: 216 FNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMK 275
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
S+GL P+ +TY L+ GY G ++EA +++ +N+ + TY+ L+ G+C + D
Sbjct: 276 SKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKID 335
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
A ++ +EM+ + V P+V YN LI C + D L+E+M KG+ N +T +I
Sbjct: 336 EAFRIRDEMEKMNVLPDVVTYNTLIDG-CSQWRDSSEVYSLIEEMDKKGVKCNAVTYNII 394
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 109/217 (50%), Gaps = 2/217 (0%)
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P + LI C E + VK ALD ++ S +++++ +L + + + A+
Sbjct: 211 PNTNSFNILIYGYCLESK-VKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARD 269
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
LL M S+G P +N ++ Y + G + A +++++M L P V+TY L++G+
Sbjct: 270 LLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFC 329
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
N G+++EA I +E +K + VTY+TLI G + + L+ EM GV+ N
Sbjct: 330 NDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAV 389
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
YN +++ +C K + A L+ M GL + +T
Sbjct: 390 TYNIILKWMCKKG-NMTEATTTLDKMEENGLSPDCVT 425
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 136/322 (42%), Gaps = 5/322 (1%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSR---RKIFDWAWSV 254
E+L+ I + ++ + A ++FNK N T + +L R A V
Sbjct: 141 ELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQV 200
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
+ I+ G +P++ +I +C K K+A E P ++ +L +
Sbjct: 201 LKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLK 260
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
++ A D+L D + ++ ++ CR+ + A ++ M P
Sbjct: 261 R-RLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVW 319
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
+N +++ + G + A + M + PDV TY L+ G + E ++ E
Sbjct: 320 TYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEM 379
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
K + + VTY+ +++ CK A L++M++ G+ P+ YN LI + C KA
Sbjct: 380 DKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYC-KAGK 438
Query: 495 WRTAEKLLEDMRLKGLHLNGIT 516
A +++++M KGL ++ T
Sbjct: 439 MGKAFRMMDEMTSKGLKIDTWT 460
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 4/190 (2%)
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
R Y S++ S H L+ + P P + ++ I AY + A
Sbjct: 101 RHYMFSDAKSLLISFISSDRQHELHKLILHPTRDLPEPSKELLDTSIGAYVQMDQPHLAT 160
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSG---YANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
++ M+ +P++ T LM+ Y + + A ++L ++ K + +++ LI
Sbjct: 161 QIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILI 220
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
GYC + AL +N+M + G P+ YN ++ +L LK + A LL DM+ KGL
Sbjct: 221 YGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDAL-LKRRLLQEARDLLLDMKSKGL 279
Query: 511 HLNGITRALI 520
N T ++
Sbjct: 280 SPNKHTYNML 289
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 93/273 (34%), Gaps = 59/273 (21%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + K KG A ++++ + + + TY I L + + D A +M+E G
Sbjct: 499 LILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENG 558
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+PD II FC G ++A + E P L+ LC+E K A
Sbjct: 559 LVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEK-A 617
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLS-------------------- 362
L + + + + + ++++I SLC+ A LL+
Sbjct: 618 LKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAA 677
Query: 363 ---------------KMISEGP--------PPGNAVFNSVIS--------AYS------- 384
KM+ G G V S +S AYS
Sbjct: 678 LTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELC 737
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
AM + + G+ + YTY LM G
Sbjct: 738 NQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEG 770
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 147/348 (42%), Gaps = 23/348 (6%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
L+ +C E L D + E+G K + +N L+ GK A + +K
Sbjct: 163 TLINGLCLEGRVSEALELVDRMVEMGHKPDLI----TINTLVNGLCLSGKEAEAMLLIDK 218
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+YGC N TY + + + A + KM E D+ K II CK G
Sbjct: 219 MVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 278
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIK 339
A ++ K + LI C D+ KL DM+ K I
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI--------KRKIN 330
Query: 340 P----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
P FS +I S + + A+ L +MI G P + S+I + K + A +M
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
+ LM S+G P++ T+ L++GY ++++ E+ + VTY+TLI+G+C+
Sbjct: 391 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 450
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
L + + A +L EM V PN+ Y L+ LC D +EK LE
Sbjct: 451 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLC----DNGESEKALE 494
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 135/321 (42%), Gaps = 3/321 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I K G AF +FN+ G N TY I +D + MI+
Sbjct: 269 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P+ +I F K GK +EA ++ + + P LI C+E+ K A
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK-A 387
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
M+D + I+ F+ +I C+ + L KM G +N++I
Sbjct: 388 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 447
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ + G + A E+ + M SR + P++ TY L+ G + G+ E+A EI + +K+ L
Sbjct: 448 FCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 507
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
Y+ +I G C + D A L + GV+P V YN +I LC K AE L
Sbjct: 508 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKG-PLSEAELLF 566
Query: 503 EDMRLKGLHLNGIT-RALIRA 522
M G +G T LIRA
Sbjct: 567 RKMEEDGHAPDGWTYNILIRA 587
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 147/330 (44%), Gaps = 7/330 (2%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
L+ +I F + K AF K G N T+ I L A + ++M+
Sbjct: 126 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
E G PD + +++ C GK EA ++ E P +++ +C+ +T
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
LA+++L K +S +I LC+ + A L ++M +G +N +
Sbjct: 246 -LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNIL 304
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I + AG ++L+ M R + P+V T++ L+ + G++ EA E+ E H
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMI--HR 362
Query: 440 RLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
++P +TY +LI G+CK D A ++++ M G PN+ +N LI C KA
Sbjct: 363 GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYC-KANRIDD 421
Query: 498 AEKLLEDMRLKGLHLNGIT-RALIRAVKEL 526
+L M L+G+ + +T LI+ EL
Sbjct: 422 GLELFRKMSLRGVVADTVTYNTLIQGFCEL 451
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 135/278 (48%), Gaps = 6/278 (2%)
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM-Y 299
A+++ K +D ++C++M G + + +I+ FC+ K A + + K+ Y
Sbjct: 97 AIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAF--SAMGKIIKLGY 154
Query: 300 PPQSVV-AFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
P ++ + LI+ LC E V AL+++D K + ++++ LC A
Sbjct: 155 EPNTITFSTLINGLCLEGR-VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAM 213
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
L+ KM+ G P + V++ K+G AME+L+ M R +K D Y+ ++ G
Sbjct: 214 LLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G ++ A + NE + + +TY+ LI G+C +D KLL +M + PNV
Sbjct: 274 CKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNV 333
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++ LI S +K R AE+L ++M +G+ + IT
Sbjct: 334 VTFSVLIDSF-VKEGKLREAEELHKEMIHRGIAPDTIT 370
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 135/307 (43%), Gaps = 30/307 (9%)
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE---KKMYPPQSVV 305
D A + MI + LP ++ S K K+ +V L ++ K + +
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAI---AKTKQYDLVLALCKQMELKGIAHNLYTL 126
Query: 306 AFLISSLCQEDETVKLALDMLDDFS--GEARKYAIKP----FSSVIRSLCRMKDVHGAKT 359
+ +I+ C+ KL L FS G+ K +P FS++I LC V A
Sbjct: 127 SIMINCFCR---CRKLCLA----FSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALE 179
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
L+ +M+ G P N++++ +G AM ++ M G +P+ TY +++
Sbjct: 180 LVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMC 239
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
GQ A E+L + ++ + +L V Y +I G CK D A L NEM+ G+ N+
Sbjct: 240 KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNII 299
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRAL----------IRAVKELEED 529
YN LI C A W KLL DM + ++ N +T ++ +R +EL ++
Sbjct: 300 TYNILIGGFC-NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKE 358
Query: 530 AIENGEA 536
I G A
Sbjct: 359 MIHRGIA 365
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 87/210 (41%), Gaps = 1/210 (0%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
GC N T+ I + D + KM G + D+ +I FC+ GK A
Sbjct: 398 GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVA 457
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
++ +K+ P L+ LC E+ K AL++ + + I ++ +I
Sbjct: 458 KELFQEMVSRKVPPNIVTYKILLDGLCDNGESEK-ALEIFEKIEKSKMELDIGIYNIIIH 516
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
+C V A L + +G PG +N +I K G ++ A + + M G P
Sbjct: 517 GMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAP 576
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKK 436
D +TY L+ + G ++ +++ E K+
Sbjct: 577 DGWTYNILIRAHLGDGDATKSVKLIEELKR 606
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/333 (19%), Positives = 124/333 (37%), Gaps = 37/333 (11%)
Query: 192 KGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDW 250
KG+ T + N LI F G+ ++ N T+ I++ +
Sbjct: 292 KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE 351
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A + ++MI G PD+ +I FCK +A+ + L K P LI+
Sbjct: 352 AEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 411
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
C+ + + L++ S ++++I+ C + ++ AK L +M+S P
Sbjct: 412 GYCKANR-IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVP 470
Query: 371 PGN-----------------------------------AVFNSVISAYSKAGDMTPAMEM 395
P ++N +I A + A ++
Sbjct: 471 PNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 530
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
+ +G+KP V TY ++ G G + EA + + +++ TY+ LIR +
Sbjct: 531 FCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLG 590
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ ++KL+ E+K G + +I L
Sbjct: 591 DGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 162/371 (43%), Gaps = 13/371 (3%)
Query: 147 ENLVCFF-----KWVTSGVV--DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEI 199
EN++ F K V + +V + L+ A C +E + L + G E G+LT
Sbjct: 274 ENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRG-MEPGLLTY-- 330
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N ++ K+GK A +V + G N TY + + RR A + ++M
Sbjct: 331 -NAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMS 389
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
G LPD +I + G +A + + + P + LI C+ + +
Sbjct: 390 RRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCR-NGAL 448
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
AL M D+ + +++ + LC+ K A L ++M+ G P F ++
Sbjct: 449 SDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTL 508
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I Y K G+M A+ + + M LKPD TY L+ G+ G+M A E+ ++ +
Sbjct: 509 IRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDI 568
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
++Y T++ G+C AL L ++M + G++PN+ N LI+ C ++ D A
Sbjct: 569 IPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYC-RSGDMPKAY 627
Query: 500 KLLEDMRLKGL 510
+ L M G+
Sbjct: 628 EYLSKMISNGI 638
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 138/291 (47%), Gaps = 7/291 (2%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
I LI F + G A ++ ++ GC + TY + L ++K+F A + +M
Sbjct: 434 IYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEM 493
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+E G +PD +I +CK G +A ++ + P + LI C+ E
Sbjct: 494 VERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEM 553
Query: 319 VKLALDMLDDFSGEARKYAIK---PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ A ++ DD RK I + +V+ C + A L +M+ +G P
Sbjct: 554 GR-AKELWDDM---IRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVT 609
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
N++I Y ++GDM A E L M S G+ PD ++Y L+ GY +E+A ++NE +
Sbjct: 610 CNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEME 669
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
K + + +TY+ ++ G+C + A ++L +M ++G+ P+ Y+ LI
Sbjct: 670 KRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLIN 720
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 157/356 (44%), Gaps = 8/356 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEI-LNELIALFSKLGKGKAAFEVF 220
+ LL IC E ++D + +GVL + + LI + ++ G A F
Sbjct: 366 NTLLVEICRRDNILEAQEIFDEMSR-----RGVLPDLVSFSSLIGVLARNGHLYQALMHF 420
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ G V + Y I+ R A + ++M+ G D ++ CK
Sbjct: 421 REMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKK 480
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
+A +++ E+ M P LI C++ K AL++ + K
Sbjct: 481 KMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDK-ALNLFEAMVRTNLKPDKVT 539
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++++I C+ ++ AK L MI + P + + +V++ + +G + A+ + M
Sbjct: 540 YNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQML 599
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+G++P++ T L+ GY G M +A E L++ N +Y+TLI GY K +
Sbjct: 600 EKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLE 659
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A L+NEM+ G+Q N+ YN ++ C + + AE++L M G++ +G T
Sbjct: 660 KAFILINEMEKRGLQFNIITYNLILNGFCAEG-KMQEAEQVLRKMIEIGINPDGAT 714
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 121/259 (46%), Gaps = 1/259 (0%)
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+FN+ + G V + T+ I + D A ++ E M+ T PD +I FC
Sbjct: 489 LFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFC 548
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
K G+ A ++ K + P +++ C + AL++ D + + +
Sbjct: 549 KAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSG-LLPEALNLCDQMLEKGIRPNL 607
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
+++I+ CR D+ A LSKMIS G P + +N++I Y K ++ A ++
Sbjct: 608 VTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINE 667
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M RGL+ ++ TY +++G+ G+M+EA ++L + + TY +LI G+ +
Sbjct: 668 MEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDN 727
Query: 459 FDCALKLLNEMKDVGVQPN 477
A + +EM G+ P+
Sbjct: 728 MKEAFRFHDEMLQRGLVPD 746
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 147/344 (42%), Gaps = 15/344 (4%)
Query: 151 CFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGV-LTVEILNELIALFSK 209
CF+ + D L++ + +E + I++ KGV +++ N+L+ +
Sbjct: 180 CFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRR-----KGVSVSINACNKLLGGLVR 234
Query: 210 LGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEK 269
G A+E++ + G N T + AL + + F+ M G D
Sbjct: 235 TGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVT 294
Query: 270 VGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDF 329
+I+ +C+ G +EA + + M P ++ LC+ + D D
Sbjct: 295 YNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGK-----YDRAKDV 349
Query: 330 SGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSK 385
E + + P +++++ +CR ++ A+ + +M G P F+S+I ++
Sbjct: 350 LIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLAR 409
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
G + A+ + M G+ PD YT L+ G+ G + +A ++ +E + VT
Sbjct: 410 NGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVT 469
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
Y+T + G CK + F A L NEM + G+ P+ + LI+ C
Sbjct: 470 YNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYC 513
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 112/261 (42%), Gaps = 19/261 (7%)
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
S + ++ + +G + EA K VV LIS+ C +V L D+L
Sbjct: 135 SXSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLIST-CFYFGSVGLIYDLL 193
Query: 327 DDFSGEARKY-----------------AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
+A+K +I + ++ L R V A + +++ G
Sbjct: 194 VRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGI 253
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
N +++A K M L M +G+ D+ TY L++ Y G +EEA +
Sbjct: 254 ELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQ 313
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+LN +TY+ ++ G CK+ ++D A +L EM +G+ PN YN L+ +C
Sbjct: 314 LLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEIC 373
Query: 490 LKALDWRTAEKLLEDMRLKGL 510
+ + A+++ ++M +G+
Sbjct: 374 RRD-NILEAQEIFDEMSRRGV 393
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 111/248 (44%), Gaps = 6/248 (2%)
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP 300
+SR K+ + S C G + D ++ + + K +E + + R K +
Sbjct: 166 GVSRVKVVESLISTCFYFGSVGLIYD-----LLVRTYVQAKKLREGSEAFQILRRKGVSV 220
Query: 301 PQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTL 360
+ L+ L + V LA ++ + + + + ++ +LC+ +
Sbjct: 221 SINACNKLLGGLVRTG-WVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFF 279
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
LS M +G +N++I+AY + G + A ++L SRG++P + TY ++ G
Sbjct: 280 LSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCK 339
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
G+ + A ++L E + + TY+TL+ C+ + A ++ +EM GV P++
Sbjct: 340 IGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVS 399
Query: 481 YNKLIQSL 488
++ LI L
Sbjct: 400 FSSLIGVL 407
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 99/238 (41%), Gaps = 37/238 (15%)
Query: 308 LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
++++LC+ D + + L D G+ I ++++I + CR V A LL+ S
Sbjct: 263 MVNALCK-DRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSR 321
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G PG +N+++ K G A ++L M GL P+ TY L+ + EA
Sbjct: 322 GMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEA 381
Query: 428 CEILNE--------------------AKKNH-------------SRLSP--VTYHTLIRG 452
EI +E A+ H S + P V Y LI G
Sbjct: 382 QEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDG 441
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+C+ ALK+ +EM G +V YN + LC K + + A+ L +M +G+
Sbjct: 442 FCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKM-FADADMLFNEMVERGM 498
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 162/371 (43%), Gaps = 13/371 (3%)
Query: 147 ENLVCFF-----KWVTSGVV--DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEI 199
EN++ F K V + +V + L+ A C +E + L + G E G+LT
Sbjct: 274 ENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRG-MEPGLLTY-- 330
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N ++ K+GK A +V + G N TY + + RR A + ++M
Sbjct: 331 -NAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMS 389
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
G LPD +I + G +A + + + P + LI C+ + +
Sbjct: 390 RRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCR-NGAL 448
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
AL M D+ + +++ + LC+ K A L ++M+ G P F ++
Sbjct: 449 SDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTL 508
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I Y K G+M A+ + + M LKPD TY L+ G+ G+M A E+ ++ +
Sbjct: 509 IRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDI 568
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
++Y T++ G+C AL L ++M + G++PN+ N LI+ C ++ D A
Sbjct: 569 IPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYC-RSGDMPKAY 627
Query: 500 KLLEDMRLKGL 510
+ L M G+
Sbjct: 628 EYLSKMISNGI 638
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 138/291 (47%), Gaps = 7/291 (2%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
I LI F + G A ++ ++ GC + TY + L ++K+F A + +M
Sbjct: 434 IYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEM 493
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+E G +PD +I +CK G +A ++ + P + LI C+ E
Sbjct: 494 VERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEM 553
Query: 319 VKLALDMLDDFSGEARKYAIK---PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ A ++ DD RK I + +V+ C + A L +M+ +G P
Sbjct: 554 GR-AKELWDDM---IRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVT 609
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
N++I Y ++GDM A E L M S G+ PD ++Y L+ GY +E+A ++NE +
Sbjct: 610 CNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEME 669
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
K + + +TY+ ++ G+C + A ++L +M ++G+ P+ Y+ LI
Sbjct: 670 KRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLIN 720
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 157/356 (44%), Gaps = 8/356 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEI-LNELIALFSKLGKGKAAFEVF 220
+ LL IC E ++D + +GVL + + LI + ++ G A F
Sbjct: 366 NTLLVEICRRDNILEAQEIFDEMSR-----RGVLPDLVSFSSLIGVLARNGHLYQALMHF 420
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ G V + Y I+ R A + ++M+ G D ++ CK
Sbjct: 421 REMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKK 480
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
+A +++ E+ M P LI C++ K AL++ + K
Sbjct: 481 KMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDK-ALNLFEAMVRTNLKPDKVT 539
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++++I C+ ++ AK L MI + P + + +V++ + +G + A+ + M
Sbjct: 540 YNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQML 599
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+G++P++ T L+ GY G M +A E L++ N +Y+TLI GY K +
Sbjct: 600 EKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLE 659
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A L+NEM+ G+Q N+ YN ++ C + + AE++L M G++ +G T
Sbjct: 660 KAFILINEMEKRGLQFNIITYNLILNGFCAEG-KMQEAEQVLRKMIEIGINPDGAT 714
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 121/259 (46%), Gaps = 1/259 (0%)
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+FN+ + G V + T+ I + D A ++ E M+ T PD +I FC
Sbjct: 489 LFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFC 548
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
K G+ A ++ K + P +++ C + AL++ D + + +
Sbjct: 549 KAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSG-LLPEALNLCDQMLEKGIRPNL 607
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
+++I+ CR D+ A LSKMIS G P + +N++I Y K ++ A ++
Sbjct: 608 VTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINE 667
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M RGL+ ++ TY +++G+ G+M+EA ++L + + TY +LI G+ +
Sbjct: 668 MEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDN 727
Query: 459 FDCALKLLNEMKDVGVQPN 477
A + +EM G+ P+
Sbjct: 728 MKEAFRFHDEMLQRGLVPD 746
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 147/344 (42%), Gaps = 15/344 (4%)
Query: 151 CFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGV-LTVEILNELIALFSK 209
CF+ + D L++ + +E + I++ KGV +++ N+L+ +
Sbjct: 180 CFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRR-----KGVSVSINACNKLLGGLVR 234
Query: 210 LGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEK 269
G A+E++ + G N T + AL + + F+ M G D
Sbjct: 235 TGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVT 294
Query: 270 VGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDF 329
+I+ +C+ G +EA + + M P ++ LC+ + D D
Sbjct: 295 YNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGK-----YDRAKDV 349
Query: 330 SGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSK 385
E + + P +++++ +CR ++ A+ + +M G P F+S+I ++
Sbjct: 350 LIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLAR 409
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
G + A+ + M G+ PD YT L+ G+ G + +A ++ +E + VT
Sbjct: 410 NGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVT 469
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
Y+T + G CK + F A L NEM + G+ P+ + LI+ C
Sbjct: 470 YNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYC 513
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 112/261 (42%), Gaps = 19/261 (7%)
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
S + ++ + +G + EA K VV LIS+ C +V L D+L
Sbjct: 135 SLSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLIST-CFYFGSVGLIYDLL 193
Query: 327 DDFSGEARKY-----------------AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
+A+K +I + ++ L R V A + +++ G
Sbjct: 194 VRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGI 253
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
N +++A K M L M +G+ D+ TY L++ Y G +EEA +
Sbjct: 254 ELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQ 313
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+LN +TY+ ++ G CK+ ++D A +L EM +G+ PN YN L+ +C
Sbjct: 314 LLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEIC 373
Query: 490 LKALDWRTAEKLLEDMRLKGL 510
+ + A+++ ++M +G+
Sbjct: 374 RRD-NILEAQEIFDEMSRRGV 393
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 111/248 (44%), Gaps = 6/248 (2%)
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP 300
+SR K+ + S C G + D ++ + + K +E + + R K +
Sbjct: 166 GVSRVKVVESLISTCFYFGSVGLIYD-----LLVRTYVQAKKLREGSEAFQILRRKGVSV 220
Query: 301 PQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTL 360
+ L+ L + V LA ++ + + + + ++ +LC+ +
Sbjct: 221 SINACNKLLGGLVRTG-WVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFF 279
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
LS M +G +N++I+AY + G + A ++L SRG++P + TY ++ G
Sbjct: 280 LSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCK 339
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
G+ + A ++L E + + TY+TL+ C+ + A ++ +EM GV P++
Sbjct: 340 IGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVS 399
Query: 481 YNKLIQSL 488
++ LI L
Sbjct: 400 FSSLIGVL 407
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 99/238 (41%), Gaps = 37/238 (15%)
Query: 308 LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
++++LC+ D + + L D G+ I ++++I + CR V A LL+ S
Sbjct: 263 MVNALCK-DRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSR 321
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G PG +N+++ K G A ++L M GL P+ TY L+ + EA
Sbjct: 322 GMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEA 381
Query: 428 CEILNE--------------------AKKNH-------------SRLSP--VTYHTLIRG 452
EI +E A+ H S + P V Y LI G
Sbjct: 382 QEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDG 441
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+C+ ALK+ +EM G +V YN + LC K + + A+ L +M +G+
Sbjct: 442 FCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKM-FADADMLFNEMVERGM 498
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 149/347 (42%), Gaps = 35/347 (10%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI FSK G+ + A+ F + G VAN T+ ++A + + A + +M
Sbjct: 274 NALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRV 333
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE----- 315
G +P+ ++ CK G+ +A V+ + + P ++ LC+E
Sbjct: 334 RGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAE 393
Query: 316 -DETVKL----------------------------ALDMLDDFSGEARKYAIKPFSSVIR 346
D + L ALD+L+ + + + + ++I
Sbjct: 394 ADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIW 453
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
LC+ + V AK+LL KM G P ++ +++ A KAG + A+ +L + G +P
Sbjct: 454 GLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQP 513
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
+V TY L+ G G + EA N+ ++ + Y LI G+CK+ + A+ L+
Sbjct: 514 NVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLM 573
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
NEM D G+ + Y LI +K + + A L M GL L+
Sbjct: 574 NEMIDKGMSLDKVVYTSLIDGY-MKQANLQDAFALKTKMIESGLQLD 619
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 144/351 (41%), Gaps = 37/351 (10%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI + K G + ++ ++ GC A+ TY I S+ + A+S +M
Sbjct: 239 NSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKR 298
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G + + + FCK G +EA ++ R + M P + L+ C+ +
Sbjct: 299 QGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGR-LD 357
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A+ +LD+ + + ++ ++ LC+ V A +LS M G ++ ++I
Sbjct: 358 DAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLI 417
Query: 381 SAYSKAGDMTPAMEMLKLMRSR-----------------------------------GLK 405
+ + A+++L M+++ GL+
Sbjct: 418 HGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLR 477
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
P+ YT +M G+ EA +L++ + + + VTY LI G CK A+
Sbjct: 478 PNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISH 537
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
N+M+++G+ PNV Y LI C K A L+ +M KG+ L+ +
Sbjct: 538 FNKMRELGLDPNVQAYTALIDGFC-KIGSLNKAMHLMNEMIDKGMSLDKVV 587
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 89/176 (50%), Gaps = 1/176 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F+ VI LC+ ++ A+ L +M + G P +NS+I Y K GD+ +++ MR
Sbjct: 203 FNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMR 262
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G DV TY L++ ++ G+ME+A E K+ + VT+ T + +CK
Sbjct: 263 KSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQ 322
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A+KL +M+ G+ PN Y L+ C KA A LL++M +GL N +T
Sbjct: 323 EAMKLFAQMRVRGMMPNEFTYTSLVDGTC-KAGRLDDAIVLLDEMVHQGLVPNVVT 377
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 113/257 (43%), Gaps = 1/257 (0%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A ++ N+ + G + Y I L + + D A S+ KM G P++ I+
Sbjct: 429 ALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMD 488
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
K GK EA + + P LI LC+ ++ A+ +
Sbjct: 489 ALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAG-SISEAISHFNKMRELGLD 547
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
++ ++++I C++ ++ A L+++MI +G V+ S+I Y K ++ A +
Sbjct: 548 PNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFAL 607
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
M GL+ D+Y YT +SG+ N M+EA +L+E Y+ LIR Y K
Sbjct: 608 KTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQK 667
Query: 456 LEEFDCALKLLNEMKDV 472
L + A L NEM+ V
Sbjct: 668 LGNMEEASSLQNEMESV 684
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 77/157 (49%), Gaps = 1/157 (0%)
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
L+ ++ P P FN VI K G++ A + M++ G PDV TY L+ GY
Sbjct: 187 LVRRLFDLLPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYG 246
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
G +EE ++++E +K+ VTY+ LI + K + A EMK GV NV
Sbjct: 247 KCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVV 306
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++ + + C + L + A KL MR++G+ N T
Sbjct: 307 TFSTFVDAFCKEGL-VQEAMKLFAQMRVRGMMPNEFT 342
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 155/383 (40%), Gaps = 66/383 (17%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+++ L++L + G A + N T + L+R + + ++
Sbjct: 136 VVDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNR----QGGLVRRL 191
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSL--CQ 314
+ +P+ +I + CK G+ EA ++ R K M VV + LI C
Sbjct: 192 FDLLPVPNVFTFNIVIDFLCKEGELVEARALFV--RMKAMGCSPDVVTYNSLIDGYGKCG 249
Query: 315 EDETVKLALDMLDDFSGEARKYA----IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
+ E V + E RK + ++++I + + A + +M +G
Sbjct: 250 DLEEV-------EQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVV 302
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
F++ + A+ K G + AM++ MR RG+ P+ +TYT L+ G G++++A +
Sbjct: 303 ANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVL 362
Query: 431 LNEAKKNHSRLSP--VTYHTLIRGYC---KLEEFDC------------------------ 461
L+E H L P VTY ++ G C K+ E D
Sbjct: 363 LDEMV--HQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGH 420
Query: 462 --------ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
AL LLN+MK+ G++ +V Y LI LC K A+ LL M GL N
Sbjct: 421 FMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLC-KDQKVDEAKSLLHKMAGCGLRPN 479
Query: 514 -----GITRALIRAVKELEEDAI 531
I AL +A KE E A+
Sbjct: 480 TVIYTTIMDALFKAGKESEAVAL 502
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 114/283 (40%), Gaps = 7/283 (2%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
K GK A V + G AN+ Y I + A + +M G D
Sbjct: 385 LCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELD 444
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ---EDETVKLAL 323
G +I CK K EA + + P + ++ +L + E E V L
Sbjct: 445 VSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLH 504
Query: 324 DMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAY 383
+LD + + + ++I LC+ + A + +KM G P + ++I +
Sbjct: 505 KILD----SGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGF 560
Query: 384 SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
K G + AM ++ M +G+ D YT L+ GY +++A + + ++ +L
Sbjct: 561 CKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDL 620
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
Y I G+C + A +L+EM G+ P+ YN LI+
Sbjct: 621 YCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIR 663
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 4/147 (2%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+ +C + E + ++ ++E+G V+ LI F K+G A + N+
Sbjct: 520 ALIDGLCKAGSISEAISHFNKMRELGLDPN----VQAYTALIDGFCKIGSLNKAMHLMNE 575
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
D G ++ Y I+ ++ A+++ KMIE+G D IS FC
Sbjct: 576 MIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNM 635
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLI 309
+EA V + + P ++V LI
Sbjct: 636 MQEARGVLSEMIGTGITPDKTVYNCLI 662
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 177/396 (44%), Gaps = 38/396 (9%)
Query: 148 NLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALF 207
N+VCF ++L+ +C + E + L+D++KE G V+T IL + +
Sbjct: 309 NVVCF---------NSLMNGLCQARRVDEAFELFDVMKESGCSAD-VITYNILLKGLCKL 358
Query: 208 SKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET-GSLPD 266
++ + E+ + GC N T+ I+ L + AW V E+M+ G P+
Sbjct: 359 RRIPEAYRHVELMRR--TEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPN 416
Query: 267 SEKVGKIISWFCKGGKAKEAHVVY--TLAREKK------MYPPQSVVAFLISSLCQ---- 314
++ CK G ++ + L RE + ++ P+ V FL+ +C+
Sbjct: 417 RFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPE--VDFLMVQVCRPTLV 474
Query: 315 ----------EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM 364
+ V+ AL +L+ + F+SV+ LC+ + + A + +
Sbjct: 475 TYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRA 534
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
+ G P ++++I SK M A+++L M G + + TY+ ++ G G+M
Sbjct: 535 LERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRM 594
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
E+A +L + + VTY+TLI G+ K + A+ LL EM + G P+V Y L
Sbjct: 595 EDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTL 654
Query: 485 IQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
LC ++ + A ++L+ M +G N IT + I
Sbjct: 655 CHGLC-RSGRFDEAVEILDYMAARGCAPNAITYSSI 689
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 149/345 (43%), Gaps = 23/345 (6%)
Query: 194 VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWS 253
V V N L+ + + AFE+F+ + GC A+ TY ++ L + + A+
Sbjct: 307 VPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYR 366
Query: 254 VCEKMIET-GSLPDSEKVGKIISWFCKGGKAKEAHVVY-TLAREKKMYPPQSVVAFLISS 311
E M T G P+ +I C G+ +A VY + + + P + AFL+
Sbjct: 367 HVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEG 426
Query: 312 LCQEDETVKLALDMLDDFSGEARKYAIKP--------------------FSSVIRSLCRM 351
LC+ ++ +L E R + P +++++ L +
Sbjct: 427 LCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKS 486
Query: 352 KDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTY 411
V A LL MI G P FNSV+ K + A + K RG +P+V TY
Sbjct: 487 GMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTY 546
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
+ L+ G + +M+EA ++L + + R + VTY T++ G K+ + A+ +L +M+D
Sbjct: 547 STLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRD 606
Query: 472 VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
G P+ YN LI K R A LL +M G H + +T
Sbjct: 607 AGCLPDAVTYNTLIDGF-FKRQRLREAVGLLREMLEAGFHPSVVT 650
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 128/286 (44%), Gaps = 9/286 (3%)
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH 287
C TY + LS+ + A + E MIE+G PD ++ CK + +AH
Sbjct: 469 CRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAH 528
Query: 288 VVYTLAREKKMYPPQSVVAFLI---SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSV 344
V+ A E+ P + LI S + + DE ++L M++ + +S+V
Sbjct: 529 NVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVE----LGCRANTVTYSTV 584
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
+ L ++ + A +L +M G P +N++I + K + A+ +L+ M G
Sbjct: 585 VDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGF 644
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
P V TYT L G G+ +EA EIL+ + +TY +++ G CK AL
Sbjct: 645 HPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALG 704
Query: 465 LLNEM-KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
+M +D V P+V Y+ LI LC KA A + LE M G
Sbjct: 705 YFEKMARDEVVAPHVIAYSALIDGLC-KAGRIDEAYEFLERMIRAG 749
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 153/354 (43%), Gaps = 27/354 (7%)
Query: 158 SGVVDALLKA--ICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKA 215
S +VD L KA + ++G E A ++V V + LI K G+
Sbjct: 687 SSIVDGLCKAGRVTEALGYFEKMARDEVVAP---------HVIAYSALIDGLCKAGRIDE 737
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A+E + G + + T+ I L D + M E G D +I+
Sbjct: 738 AYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMIN 797
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED---ETVKLALDMLDDFSGE 332
+C G+ A+ + + + +I +LC D E V + +D E
Sbjct: 798 AYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDE 857
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
++++I SL + A LL M+++G P + +V+ KAG A
Sbjct: 858 I------SYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVA 911
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
++L+ MRSRG PD+ TYT ++SG + Q+ AC+ E + + + + Y +LI
Sbjct: 912 AKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDA 971
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
+CK ++ D A KLL + G++P + Y+ ++ SLC R +K LE +R
Sbjct: 972 FCKADKVDDAWKLL---RSSGIEPTITMYSTMVDSLCKN----RGTDKALEVIR 1018
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 147/361 (40%), Gaps = 46/361 (12%)
Query: 186 EIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRR 245
E+G + V +++ L+ K+G+ + A V + D GC+ + TY I+ +R
Sbjct: 571 ELGCRANTVTYSTVVDGLL----KVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKR 626
Query: 246 KIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVV 305
+ A + +M+E G P + C+ G+ EA + + P
Sbjct: 627 QRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITY 686
Query: 306 AFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLL 361
+ ++ LC+ + L F AR + P +S++I LC+ + A L
Sbjct: 687 SSIVDGLCKAGRVT----EALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFL 742
Query: 362 SKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG 421
+MI G P F+ +I+ AG + +E+ M RG K D+Y Y +++ Y
Sbjct: 743 ERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLK 802
Query: 422 GQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC---KLEEF---------DC-------- 461
G+ A +L E K + + VT+ +I+ C +++E DC
Sbjct: 803 GEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNT 862
Query: 462 -------------ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLK 508
AL+LL M G P+ Y ++ L KA A KLL++MR +
Sbjct: 863 LITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGL-FKAGSPEVAAKLLQEMRSR 921
Query: 509 G 509
G
Sbjct: 922 G 922
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 131/305 (42%), Gaps = 5/305 (1%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI K G+ AF F K +G TY I+ L R D + E+M
Sbjct: 5 NVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAG 64
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P++ +++ G+AKEA + P +I LC+E E ++
Sbjct: 65 RGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGE-IE 123
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A ++D+ ++ + ++ +LC + V A +++ G P +N+++
Sbjct: 124 AAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMV 183
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
KAG + A +L+L+ P V+T+T + G + G + A E + +
Sbjct: 184 DGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVS 243
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+ VTY LI G CK + D AL LL +D Q + ++ L+ LC +A A +
Sbjct: 244 PNTVTYDALIDGLCKAGKLDIALGLL---RDKNSQAGMFAFSSLLHGLC-QAHRLEEAIQ 299
Query: 501 LLEDM 505
LL+ M
Sbjct: 300 LLKAM 304
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 146/341 (42%), Gaps = 47/341 (13%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I K G+ +AAF V ++ D G V + E + + AL D AW ++++ G
Sbjct: 112 IIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIG 171
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP---------------------- 300
PD+ ++ K G+ + A +V L E P
Sbjct: 172 FTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAY 231
Query: 301 ------PQSVVA-------FLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRS 347
PQ+ V+ LI LC+ + + +AL +L D + +A +A FSS++
Sbjct: 232 EFFDSMPQTGVSPNTVTYDALIDGLCKAGK-LDIALGLLRDKNSQAGMFA---FSSLLHG 287
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
LC+ + A LL M P FNS+++ +A + A E+ +M+ G D
Sbjct: 288 LCQAHRLEEAIQLLKAMPC---VPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSAD 344
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKL 465
V TY L+ G ++ EA + ++ SP VT+ TLI+G C + A ++
Sbjct: 345 VITYNILLKGLCKLRRIPEAYRHVELMRRTEG-CSPNVVTFSTLIQGLCNAGRVNQAWEV 403
Query: 466 LNEMKDV-GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
M V G+ PN Y L++ LC KA D R E+ E M
Sbjct: 404 YERMVAVEGISPNRFTYAFLLEGLC-KAGDSRRLEQCFEQM 443
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 144/356 (40%), Gaps = 43/356 (12%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+ G+ K AF + + GC T+ I+ L + + A+ V ++M++
Sbjct: 75 NTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVD 134
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED--ET 318
G +PD E ++ C+ G+ EA + P ++ L + E
Sbjct: 135 RGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEA 194
Query: 319 VKLALDML-DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
+ L +L + FS + F+ + L + ++ GA M G P ++
Sbjct: 195 AGMVLQLLAESFSSPT----VFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYD 250
Query: 378 SVISAYSKAGDMTPAM-----------------------------EMLKLMRSRGLKPDV 408
++I KAG + A+ E ++L+++ P+V
Sbjct: 251 ALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCVPNV 310
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNE 468
+ LM+G +++EA E+ + K++ +TY+ L++G CKL A + +
Sbjct: 311 VCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVEL 370
Query: 469 MKDV-GVQPNVDEYNKLIQSLCLKAL---DWRTAEKLLEDMRLKGLHLNGITRALI 520
M+ G PNV ++ LIQ LC W E+++ ++G+ N T A +
Sbjct: 371 MRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVA---VEGISPNRFTYAFL 423
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 74/149 (49%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++ +I LC+ V A T K I G P +++VI + ++ ++L+ M
Sbjct: 4 YNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMA 63
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
RG P+ TY L++ G+ +EA +L N +T+ +I+G CK E +
Sbjct: 64 GRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIE 123
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A ++++EM D G P+V+ + L+ +LC
Sbjct: 124 AAFRVVDEMVDRGFVPDVEIHTVLLHALC 152
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 94/203 (46%), Gaps = 4/203 (1%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
++ +Y I +L + + A + M+ G PD+ ++ K G + A +
Sbjct: 856 DEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLL 915
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
R + P +IS L + + + LA D ++ + K +SS+I + C+
Sbjct: 916 QEMRSRGHSPDLRTYTIMISGLSKAKQ-LPLACDYFEEMLRKNLKPDAIVYSSLIDAFCK 974
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
V A LL S G P ++++++ + K A+E+++ M+S+ +P ++
Sbjct: 975 ADKVDDAWKLLR---SSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHI 1031
Query: 411 YTGLMSGYANGGQMEEACEILNE 433
+T L + Y G+++EA +++N+
Sbjct: 1032 WTSLATAYVAEGRVDEAVKLVND 1054
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 154/349 (44%), Gaps = 40/349 (11%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVA-NQETYYFTIEALSRRKIFDWAWSVCEKMIET 261
L+A S+ A +F + A TY I +L RR A M+ +
Sbjct: 123 LLAHLSRFALAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLMVRS 182
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQE---D 316
G PD+ +I +C+ + A ++ + Q VV++ LI LC+ D
Sbjct: 183 GWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGF--AQDVVSYATLIEGLCEAGRID 240
Query: 317 ETVKL---------------------------ALDMLDDFSGEARKYAIKPFSSVIRSLC 349
E V+L L ML + + + +++V+ C
Sbjct: 241 EAVELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRC 300
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
R + A+ +L +M +G P +VI+AY K G M+ A+ +L+LM+ RG KP+V+
Sbjct: 301 RERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVW 360
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
TY L+ G+ N G++ +A +LN+ + VTY+ LIRG C + A +LL M
Sbjct: 361 TYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLM 420
Query: 470 KDVGVQPNVDEYNKLIQSLCLKALDWRT--AEKLLEDMRLKGLHLNGIT 516
+ G+ + YN LI +LC D RT A L + + +G+ N +T
Sbjct: 421 EGDGLIADQYTYNALINALC---KDGRTDQACSLFDSLETRGIKPNAVT 466
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 112/234 (47%), Gaps = 1/234 (0%)
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+M E G P + ++ + C+ KAKEA + EK + P +I++ C+E
Sbjct: 278 RRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKE 337
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
AL +L+ K + ++++++ C VH A TLL+KM + G P
Sbjct: 338 GRMSD-ALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVT 396
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N +I G + A +L+LM GL D YTY L++ G+ ++AC + + +
Sbjct: 397 YNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLE 456
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + VT+++LI G CK + D A K L +M G P+ Y+ I+ LC
Sbjct: 457 TRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLC 510
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 130/326 (39%), Gaps = 5/326 (1%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
A++ A C + + +++K G K V N L+ F GK A + NK
Sbjct: 329 AVINAYCKEGRMSDALRVLELMKLRGCKPN----VWTYNALVQGFCNEGKVHKAMTLLNK 384
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + TY I + A+ + M G + D +I+ CK G+
Sbjct: 385 MRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGR 444
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+A ++ + + P LI+ LC+ + +A L+ +S
Sbjct: 445 TDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKA-DIAWKFLEKMVSAGCTPDTYTYS 503
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
S I LC+MK + + +M+ + P + VI K + M S
Sbjct: 504 SFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSS 563
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G PDV TYT M Y G++ EA +L E KN + + Y+TL+ G+ + + D A
Sbjct: 564 GCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHA 623
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ +L +M V PN Y L++ L
Sbjct: 624 VSILKQMTSVASVPNQFTYFILLRHL 649
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 86/181 (47%), Gaps = 8/181 (4%)
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP-PGNAVFNSVISAYSKAGDMTPAMEMLK 397
+PF+S++ L R A L + M PP P +N+VI + + D+ A+ L
Sbjct: 118 RPFASLLAHLSRFALAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLS 177
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
LM G +PD YT+ L+ GY Q++ A ++ ++ V+Y TLI G C+
Sbjct: 178 LMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAG 237
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITR 517
D A++L EM QP++ Y L++ LC R E LL R+K L TR
Sbjct: 238 RIDEAVELFGEMD----QPDMHMYAALVKGLCNAE---RGEEGLLMLRRMKELGWRPSTR 290
Query: 518 A 518
A
Sbjct: 291 A 291
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 140/353 (39%), Gaps = 6/353 (1%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+K +C++ +E + +KE+G + + ++ + K K A E+ +
Sbjct: 259 ALVKGLCNAERGEEGLLMLRRMKELGWRP----STRAYAAVVDFRCRERKAKEAEEMLQE 314
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ G T I A + A V E M G P+ ++ FC GK
Sbjct: 315 MFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGK 374
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+A + R + P LI C D ++ A +L G+ ++
Sbjct: 375 VHKAMTLLNKMRACGVNPDAVTYNLLIRGQCI-DGHIESAFRLLRLMEGDGLIADQYTYN 433
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
++I +LC+ A +L + + G P FNS+I+ K+G A + L+ M S
Sbjct: 434 ALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSA 493
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G PD YTY+ + +E + E + + S V Y +I K +
Sbjct: 494 GCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLV 553
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
+ EM G P+V Y +++ C++ AE +L +M G+ ++ +
Sbjct: 554 ARTWGEMVSSGCNPDVVTYTTSMRAYCIEG-RLNEAENVLMEMSKNGVTVDTM 605
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 125/308 (40%), Gaps = 13/308 (4%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+AL++ C+ + L + ++ G V N LI G ++AF +
Sbjct: 363 NALVQGFCNEGKVHKAMTLLNKMRACGVNPDAV----TYNLLIRGQCIDGHIESAFRLLR 418
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G +A+Q TY I AL + D A S+ + + G P++ +I+ CK G
Sbjct: 419 LMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSG 478
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP- 340
KA A P + I LC+ +K + + L F GE + +KP
Sbjct: 479 KADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCK----MKGSQEGLS-FIGEMLQKDVKPS 533
Query: 341 ---FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
++ VI L + ++ +M+S G P + + + AY G + A +L
Sbjct: 534 TVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLM 593
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M G+ D Y LM G+A+ GQ + A IL + S + TY L+R ++
Sbjct: 594 EMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMR 653
Query: 458 EFDCALKL 465
+ L L
Sbjct: 654 LVEDVLPL 661
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 118/306 (38%), Gaps = 18/306 (5%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI K G+ A +F+ G N T+ I L + D AW EKM+
Sbjct: 433 NALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVS 492
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD+ I CK ++E +K + P +I L +E
Sbjct: 493 AGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKE-RNYG 551
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
L + + +++ +R+ C ++ A+ +L +M G +N+++
Sbjct: 552 LVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLM 611
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM-----------------SGYANGGQ 423
++ G A+ +LK M S P+ +TY L+ +G +
Sbjct: 612 DGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIE 671
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
+ + + + KKN + TY +++ G+ + + A L++ MK+ + N D Y
Sbjct: 672 LTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTA 731
Query: 484 LIQSLC 489
L+ C
Sbjct: 732 LVTCFC 737
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 147/348 (42%), Gaps = 35/348 (10%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K G AFE+F++ GC N TY I L + A + E+MI+ G
Sbjct: 243 LIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKG 302
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE---TV 319
P I C G++ EA + +++ P LIS L ++ + +
Sbjct: 303 IEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAI 362
Query: 320 KLALDML-DDFSGEARKYA------------------------------IKPFSSVIRSL 348
+ ML D A Y+ + ++ +I+
Sbjct: 363 GVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGF 422
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
C + + A + +M+ GP P +N +I Y K G M AM +L++M+ GLK D
Sbjct: 423 CSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDT 482
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNE 468
+TY L+SG++ GG++E A + NE ++ + VTY+ +I GY + + D AL L +
Sbjct: 483 WTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWK 542
Query: 469 MKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
M + G P+ YN +I K AE M +GL N IT
Sbjct: 543 MVESGNVPSSGTYNMMISGFS-KTNRISEAENFCGKMVKQGLLPNVIT 589
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 176/392 (44%), Gaps = 40/392 (10%)
Query: 184 VKEIGE-KEKGV-LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEA 241
VK +G+ K++G V+ LI+ S+ GK + A V++K G V TY I
Sbjct: 327 VKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQ 386
Query: 242 LSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPP 301
L F+ A ++ E M+ SLP++E II FC G ++A ++ + K P
Sbjct: 387 LYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFD--QMLKAGPS 444
Query: 302 QSVVAF-LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTL 360
+V+ + +I + + + A+ +L+ G K ++++I R + A +L
Sbjct: 445 PNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSL 504
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
++M+ G P +N++I+ Y + A+ + M G P TY ++SG++
Sbjct: 505 FNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSK 564
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK---------- 470
++ EA + K + +TY + I G CK A K+ +EMK
Sbjct: 565 TNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCT 624
Query: 471 ---------------------DVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
D G +PNVD Y L++ LC K + A++L+E M+ KG
Sbjct: 625 YSSLIDGLCQEGQAEDAERLLDDGCEPNVDTYTTLVRGLCGKGRCYE-ADQLVESMKKKG 683
Query: 510 LHLN-GITRA-LIRAVKELE-EDAIENGEALV 538
L + I RA L+ K LE E A++ +++V
Sbjct: 684 LQPSEEIYRALLVGQCKNLEVESALKIFDSMV 715
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 153/364 (42%), Gaps = 4/364 (1%)
Query: 155 WVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGK 214
+V + V L+ C + G EV + ++ EI T+ + L+ K
Sbjct: 127 FVPADNVRILMIKSCRNEG--EVKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDG 184
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
+V+ + + G N T+ I+ L + A + + G+ PD+ +I
Sbjct: 185 LGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLI 244
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR 334
CK G A ++ + P + LI+ LC E ++ A+DML++ +
Sbjct: 245 IGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGR-LEEAMDMLEEMIDKGI 303
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
+ + ++ I SLC A LL KM G P + ++IS S+ G A+
Sbjct: 304 EPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIG 363
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+ M + GL P TY+ L++ G+ E A I + S + TY+ +I+G+C
Sbjct: 364 VYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFC 423
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG 514
+ A + ++M G PNV YN +I + K A +LLE M+ GL L+
Sbjct: 424 SIGYIQKATAIFDQMLKAGPSPNVITYNIIIH-IYFKQGYMNNAMRLLEMMKGNGLKLDT 482
Query: 515 ITRA 518
T A
Sbjct: 483 WTYA 486
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 169/394 (42%), Gaps = 19/394 (4%)
Query: 116 DGYLESSLDSFELDLHEDFVLKVLETPLVLGENLVCFFKWVTSGVVDALLKAICSSVGKK 175
DG + +++ ++ +++ +V ET L + E ++ + + ++K CS +
Sbjct: 371 DGLVPTAV-TYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQ 429
Query: 176 EVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETY 235
+ A++D + + G V+T I+ I ++ K G A + G + TY
Sbjct: 430 KATAIFDQMLKAGPSPN-VITYNII---IHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTY 485
Query: 236 YFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE 295
I SR + A+S+ +M+E G P+ II+ + K +A ++ E
Sbjct: 486 ANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVE 545
Query: 296 KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRM 351
P +IS + + + ++F G+ K + P ++S I LC+
Sbjct: 546 SGNVPSSGTYNMMISGFSKTNR-----ISEAENFCGKMVKQGLLPNVITYTSFIDGLCKN 600
Query: 352 KDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTY 411
A + +M P ++S+I + G A +L G +P+V TY
Sbjct: 601 GRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLL----DDGCEPNVDTY 656
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
T L+ G G+ EA +++ KK + S Y L+ G CK E + ALK+ + M
Sbjct: 657 TTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVT 716
Query: 472 VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
G QP + +Y LI +LC KA + A+ + + M
Sbjct: 717 TGFQPCLSDYKALICALC-KANFRQKAQCMFQTM 749
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 118/253 (46%), Gaps = 14/253 (5%)
Query: 266 DSEKVGKIISW-----FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
++E V + W F K + ++ L R++ P +V +I S C+ + VK
Sbjct: 90 NTESVLRFFHWVSRTHFFKHDMSCFVSMLNRLVRDRLFVPADNVRILMIKS-CRNEGEVK 148
Query: 321 LALDMLDDFSGEAR-KYAIKPFSSVIRSLCRMKDVHG-AKTLLSKMISEGPPPGNAVFNS 378
+ +L + + Y + FS+++ L + D+ G + + +M++ G P FN+
Sbjct: 149 RVIQVLSEINTTYDFGYTLYSFSTLLIQLGKF-DMDGLGRDVYIEMLNSGIRPNLFTFNA 207
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I G + A ++ + G PD +TYT L+ G+ G ++ A E+ + K+
Sbjct: 208 MIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDG 267
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
+ VTY LI G C + A+ +L EM D G++P V Y I SLC R+
Sbjct: 268 CDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAG---RSC 324
Query: 499 E--KLLEDMRLKG 509
E KLL M+ +G
Sbjct: 325 EAVKLLGKMKKRG 337
>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
[Vitis vinifera]
Length = 644
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 189/445 (42%), Gaps = 81/445 (18%)
Query: 159 GVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFE 218
GV ++LLKA+ S +++ WD +KE+ + G L I++ I+ + G ++
Sbjct: 187 GVCNSLLKALLES---EQLNLAWDFLKEMKSQGLG-LNASIISLFISGYCSQGNIDTGWK 242
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+ + G + Y I++L + + A S+ KM + G DS V ++ +C
Sbjct: 243 LLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYC 302
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA---LDML------DDF 329
K GK++EA V + + P V IS LC + +K A DM D F
Sbjct: 303 KVGKSEEAMDVLEVFN---LSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCF 359
Query: 330 S---------------------GEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKM 364
S G+ K I+P ++ +I S C+ ++ A+ L +M
Sbjct: 360 SYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRM 419
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS----------------------- 401
I+EG P +N++++ Y K G + A E+L +MRS
Sbjct: 420 ITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLV 479
Query: 402 ------------RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
RG PDV T+T ++ G++N G EEA + ++H VT L
Sbjct: 480 NEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSAL 539
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC-LKALDWRTAEKLLEDMRLK 508
+ GYC+ A L ++M D G++ +V YN LI C L +D A L+ M
Sbjct: 540 LNGYCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSLGNID--DACHLVSMMIEH 597
Query: 509 GLHLNGITRALIRAVKELEEDAIEN 533
G+ N IT + V E+ +EN
Sbjct: 598 GIMPNNITHHAL--VLGYEKKCVEN 620
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 1/140 (0%)
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
V+ +++ Y K A++++ MR + P + L+ Q+ A + L E
Sbjct: 152 TVYGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKE 211
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
K L+ I GYC D KLL EMK +G++P+V Y +I SLC +L
Sbjct: 212 MKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSL 271
Query: 494 DWRTAEKLLEDMRLKGLHLN 513
+ A +L M G+ L+
Sbjct: 272 -LKEATSILFKMTQMGVFLD 290
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 73/186 (39%), Gaps = 33/186 (17%)
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A L+ KM P V NS++ A ++ + A + LK M+S+GL + + +S
Sbjct: 170 ALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEMKSQGLGLNASIISLFIS 229
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV-- 474
GY + G ++ ++L E K + V Y +I CK+ A +L +M +GV
Sbjct: 230 GYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFL 289
Query: 475 ------------------------------QPNVDEYNKLIQSLCLKALDWRTAEKLLED 504
PN+ +N I LC + A K+ +D
Sbjct: 290 DSVSVSSVVDGYCKVGKSEEAMDVLEVFNLSPNIFVFNSFISKLCTDG-NMLKAAKVFQD 348
Query: 505 MRLKGL 510
M GL
Sbjct: 349 MCEMGL 354
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 133/268 (49%), Gaps = 10/268 (3%)
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE-- 315
M E G PD IIS CK GK EA + EK + P + ++ LC+
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 316 -DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
DE +L M++ A A ++++I LC+ +++ A LL +M S+G P N
Sbjct: 61 VDEADELFHKMIER-GCSANTVA---YNALINGLCKDENIERAYKLLEEMASKGYEPDNI 116
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
+N+++S + G ++ A + M SRG PDV Y GL+ G++ EA +
Sbjct: 117 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTM 176
Query: 435 KKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
+++P +TY+TLI G+C++E+ D A+KL ++ G P+ YN ++ L K+
Sbjct: 177 DMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKS 236
Query: 493 LDWRTAEKLLEDMRLKGLHLNGITRALI 520
+ AE++ + M G NG T +++
Sbjct: 237 -NMDEAEEMFKKMVDSGCAPNGATYSIV 263
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 147/311 (47%), Gaps = 22/311 (7%)
Query: 191 EKGV-LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
EKGV V ++ + GK A E+F+K + GC AN Y I L + + +
Sbjct: 38 EKGVNPDVATYTIIVDRLCRAGKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIE 97
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF-- 307
A+ + E+M G PD+ I+S C+ GK EA + + + Y P VVA+
Sbjct: 98 RAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFD-SMPSRGYSPD-VVAYNG 155
Query: 308 LISSLCQEDETVKL-----ALDMLDDFSGEARKYA--IKPFSSVIRSLCRMKDVHGAKTL 360
L+ +L +E + + +DM D RK A + ++++I CR++ A L
Sbjct: 156 LLDALYKEGKVAEAWGLFKTMDMAD------RKVAPDLITYNTLIDGFCRVEKTDEAMKL 209
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
+I++G P +NS++ ++ +M A EM K M G P+ TY+ ++SG+
Sbjct: 210 FKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCR 269
Query: 421 GGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G M E+ E R SP + + +I CK ++ D A K+L EM +G P+V
Sbjct: 270 VGNMARCLELYEEM--TEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDV 327
Query: 479 DEYNKLIQSLC 489
YN L+ LC
Sbjct: 328 VTYNILLDGLC 338
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 152/333 (45%), Gaps = 9/333 (2%)
Query: 158 SGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEIL-NELIALFSKLGKGKAA 216
+G++DAL K + +V W + K + ++ V I N LI F ++ K A
Sbjct: 154 NGLLDALYK-------EGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEA 206
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
++F G + + TY + L+R+ D A + +KM+++G P+ ++S
Sbjct: 207 MKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSG 266
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
C+ G +Y EK+ P + +I LC+ + V A +L++ S
Sbjct: 267 HCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKA-KKVDDAHKVLEEMSKIGAVP 325
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ ++ ++ LC+ V A L S M+ G P ++ V++ K + A +
Sbjct: 326 DVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLF 385
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
M R L PDV T+ LM G G+++EA ++L+ +++ VT TL+ G C+
Sbjct: 386 DRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRD 445
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ D A++L M + G +V +N ++ LC
Sbjct: 446 KRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLC 478
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 114/258 (44%), Gaps = 3/258 (1%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
TY I L + A + E+M E G PD I+ C+ GK EA ++
Sbjct: 12 TYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFHKM 71
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
E+ LI+ LC+ DE ++ A +L++ + + + +++++ LCRM
Sbjct: 72 IERGCSANTVAYNALINGLCK-DENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGK 130
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL--MRSRGLKPDVYTY 411
V AK M S G P +N ++ A K G + A + K M R + PD+ TY
Sbjct: 131 VSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITY 190
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
L+ G+ + +EA ++ + VTY++++ G + D A ++ +M D
Sbjct: 191 NTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVD 250
Query: 472 VGVQPNVDEYNKLIQSLC 489
G PN Y+ ++ C
Sbjct: 251 SGCAPNGATYSIVLSGHC 268
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 131/347 (37%), Gaps = 46/347 (13%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A E+F K D GC N TY + R + E+M E PD +I
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVID 300
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGE 332
CK K +AH V + P L+ LC+ D+ +L M+D+
Sbjct: 301 MLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAP 360
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
I +S V+ LC+ VH A+ L +MI P FN ++ KAG + A
Sbjct: 361 D----IVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEA 416
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN-------------------- 432
++L +M + PD T T LM G + +EA +
Sbjct: 417 KDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAG 476
Query: 433 ---EAK------------KNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
E K K+ SP VTY TL+ + D A+ +M G
Sbjct: 477 LCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCA 536
Query: 476 PNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRA 522
P+ YN L+ L K A++L + M+ KG L+ +A +RA
Sbjct: 537 PDYVAYNTLMNGL-RKQGRHIQADRLTQAMKEKGF-LSDCFKAPLRA 581
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 126/283 (44%), Gaps = 11/283 (3%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V + N +I + K K A +V + G V + TY ++ L + + D A +
Sbjct: 292 VLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFS 351
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
M++ G PD +++ CK K +A V++ E+K+ P L+ LC+
Sbjct: 352 TMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAG 411
Query: 317 ETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
+ + A D+LD S ++ + P ++++ LCR K A L M+ +G
Sbjct: 412 K-LDEAKDLLDVMS----EHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVAD 466
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLK-LMRSRG-LKPDVYTYTGLMSGYANGGQMEEACEI 430
N V++ + G + A+ K +++S G PDV TYT L++ G++++A +
Sbjct: 467 VLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDY 526
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
+ + V Y+TL+ G K A +L MK+ G
Sbjct: 527 FQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKG 569
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 147/309 (47%), Gaps = 2/309 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +++ + G E+ K +GC + +Y ++ L K +D + +M+
Sbjct: 182 NLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVR 241
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ +I++ C+ G ++ H + E P + A +I +C+ D +
Sbjct: 242 VGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICK-DGHHE 300
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
+A D+L K + +++V++ LC + A+ LL++M E P + FN ++
Sbjct: 301 VANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILV 360
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ + G + +E+L+ M G PDV TYT +++G+ G ++EA +L +
Sbjct: 361 DFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCK 420
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+ ++Y +++G C+ E + A +L++ M G PN +N LI +C K L + E
Sbjct: 421 PNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIE- 479
Query: 501 LLEDMRLKG 509
LL+ M + G
Sbjct: 480 LLKQMLVNG 488
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 129/294 (43%), Gaps = 10/294 (3%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
K G + A ++ ++ YG N Y ++ L + ++ A + +M + D
Sbjct: 293 ICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLD 352
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLAL 323
++ +FC+ G + E P +I+ C+E DE V L
Sbjct: 353 DVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVML-- 410
Query: 324 DMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAY 383
L + S K ++ V++ LCR + A+ L+S MI +G P FN++I+
Sbjct: 411 --LKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFM 468
Query: 384 SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
K G + A+E+LK M G PD+ +Y+ ++ G G+ EEA E+LN +
Sbjct: 469 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNT 528
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
+ Y ++ + D +++ + ++D V+ + YN +I SLC + W T
Sbjct: 529 IIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKR---WET 579
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 123/278 (44%), Gaps = 2/278 (0%)
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH 287
C + T+ ++ + + D + E+M+E G +PD +I+ FCK G EA
Sbjct: 349 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAV 408
Query: 288 VVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRS 347
++ P ++ LC+ + V A +++ + F+++I
Sbjct: 409 MLLKNMSACGCKPNTISYTIVLKGLCRAERWVD-AQELISHMIQQGCLPNPVTFNTLINF 467
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
+C+ V A LL +M+ G P +++VI KAG A+E+L +M ++G+ P+
Sbjct: 468 MCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPN 527
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
Y+ + S + G+ ++ ++ + + R Y+ +I CK E D A+
Sbjct: 528 TIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFA 587
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
M G PN Y LI+ L + L R A+ LL ++
Sbjct: 588 YMVSNGCMPNESTYTILIRGLASEGL-VREAQDLLSEL 624
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 135/314 (42%), Gaps = 20/314 (6%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A V ++ GC A + +EA R F A + + G DS ++S
Sbjct: 127 ALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVS 186
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEA 333
C+ G E V L + +V++ ++ LC D +++ E
Sbjct: 187 AICEQGCVDEG--VELLRKLPSFGCEPDIVSYNAVLKGLCMAKR-----WDDVEELMVEM 239
Query: 334 RKYAIKP----FSSVIRSLCR---MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
+ P F+++I LCR + VH A LS+M G P ++ ++I K
Sbjct: 240 VRVGCPPNVATFNTLIAYLCRNGLFEQVHEA---LSQMPEHGCTPDLRMYATIIDGICKD 296
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
G A ++L M S GLKP+V Y ++ G + + EEA ++L E + L VT+
Sbjct: 297 GHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTF 356
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
+ L+ +C+ D ++LL +M + G P+V Y +I C + L A LL++M
Sbjct: 357 NILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGL-VDEAVMLLKNMS 415
Query: 507 LKGLHLNGITRALI 520
G N I+ ++
Sbjct: 416 ACGCKPNTISYTIV 429
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 8/185 (4%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+ ++RSLC + A T+L +M G + + ++ A + G A+ L+++
Sbjct: 111 YFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLH 170
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
++G D ++S G ++E E+L + V+Y+ +++G C + +D
Sbjct: 171 AKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWD 230
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE--------DMRLKGLHL 512
+L+ EM VG PNV +N LI LC L + E L + D+R+ +
Sbjct: 231 DVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATII 290
Query: 513 NGITR 517
+GI +
Sbjct: 291 DGICK 295
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 84/187 (44%), Gaps = 1/187 (0%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A E+ + GC+ N T+ I + ++ + + A + ++M+ G PD +I
Sbjct: 442 AQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVID 501
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
K GK +EA + + K + P + + + S+L +E T K+ + M D +
Sbjct: 502 GLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKI-IQMFDSIQDATVR 560
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+++VI SLC+ + A + M+S G P + + +I + G + A ++
Sbjct: 561 SDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDL 620
Query: 396 LKLMRSR 402
L + SR
Sbjct: 621 LSELCSR 627
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 158/356 (44%), Gaps = 7/356 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA-FEVF 220
+ L+ +C S + A +D + E G K V N LI+ F K G AA +
Sbjct: 200 NVLIDGLCKSGDVEAARAFFDEMLEAGCKPD----VYTYNILISGFCKAGNTDAASHSLA 255
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ GC + TY ++ L++ K + A ++ EK+ G P +++ CK
Sbjct: 256 QETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKM 315
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
G+ +EA + + P LI L +E + + A + + +
Sbjct: 316 GRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFE-AYKLFKEMALRGLALDTVC 374
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++++IR L + + A ++ M S G P +++I SKAG + A+ + K M
Sbjct: 375 YTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSME 434
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+RGL P+ Y+ L+ G +M+ A E+L + KK +TY+ LI G CK + +
Sbjct: 435 ARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVE 494
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A +EM + G +P+V YN LI C KA + A + +DM N +T
Sbjct: 495 AARAFFDEMLEAGCKPDVYTYNILISGFC-KAGNTDAACGVFDDMSSSRCSANVVT 549
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 160/367 (43%), Gaps = 47/367 (12%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRR-------KIF 248
T+ N L+ K+G+ + A ++ K D GC + TY I+ L + K+F
Sbjct: 20 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF 79
Query: 249 D----------------------------WAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
A SV + M G +PD + +I K
Sbjct: 80 KEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKA 139
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
G+ A ++ + + P + V + LI LC+ + + AL+ML + +K P
Sbjct: 140 GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK-MDCALEML----AQMKKAFCTP 194
Query: 341 ----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
++ +I LC+ DV A+ +M+ G P +N +IS + KAG+ A L
Sbjct: 195 DTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSL 254
Query: 397 KLMRS-RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
+ G D++TYT ++ A ++EEA ++ + N + TY+ L+ G CK
Sbjct: 255 AQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCK 314
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
+ + A+ LL ++ D G P+V Y LI L + + A KL ++M L+GL L+ +
Sbjct: 315 MGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFE-AYKLFKEMALRGLALDTV 373
Query: 516 T-RALIR 521
ALIR
Sbjct: 374 CYTALIR 380
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 123/280 (43%), Gaps = 5/280 (1%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
T+ N L+ K+G+ + A ++ K D GC + TY I+ L + K A+ +
Sbjct: 301 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF 360
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
++M G D+ +I + GK +A VY P ++ +I L +
Sbjct: 361 KEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKA 420
Query: 316 DETVKLALDMLDDFSGEARKYAIKP--FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
+ A+ + S EAR A +S++I LC+ + + A +L++M P
Sbjct: 421 GR-IGAAVRIFK--SMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 477
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+N +I K+GD+ A M G KPDVYTY L+SG+ G + AC + ++
Sbjct: 478 ITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDD 537
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
+ + VTY LI G CK + A MK+ G
Sbjct: 538 MSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKERG 577
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 136/328 (41%), Gaps = 2/328 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V L+ +I SK G+ AA +F G N+ Y I L + + D A +
Sbjct: 126 VVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLA 185
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M + PD+ +I CK G + A + E P LIS C+
Sbjct: 186 QMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAG 245
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
T + + + + I +++++ L + K + A L+ K+ + G P A +
Sbjct: 246 NTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATY 305
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N++++ K G + A+++L+ + G PDV TYT L+ G + EA ++ E
Sbjct: 306 NALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMAL 365
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
L V Y LIR + + A + M G P+V + +I L KA
Sbjct: 366 RGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLS-KAGRIG 424
Query: 497 TAEKLLEDMRLKGLHLNGIT-RALIRAV 523
A ++ + M +GL N + ALI +
Sbjct: 425 AAVRIFKSMEARGLAPNEVVYSALIHGL 452
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 117/263 (44%), Gaps = 1/263 (0%)
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A ++ EK+ G P +++ CK G+ +EA + + P LI
Sbjct: 5 AVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLID 64
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
L +E + + A + + + ++++IR L + + A ++ M S G
Sbjct: 65 GLGKEKRSFE-AYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCV 123
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P +++I SKAG + A+ + K M +RGL P+ Y+ L+ G +M+ A E+
Sbjct: 124 PDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEM 183
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
L + KK +TY+ LI G CK + + A +EM + G +P+V YN LI C
Sbjct: 184 LAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCK 243
Query: 491 KALDWRTAEKLLEDMRLKGLHLN 513
+ L ++ + G ++
Sbjct: 244 AGNTDAASHSLAQETTINGCTID 266
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 423 QMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
++EEA ++ + N + TY+ L+ G CK+ + A+ LL ++ D G P+V Y
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 483 KLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIR 521
LI L + + A KL ++M L+GL L+ + ALIR
Sbjct: 61 SLIDGLGKEKRSFE-AYKLFKEMALRGLALDTVCYTALIR 99
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 143/304 (47%), Gaps = 3/304 (0%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
+SK GK A + F++ D+G + N Y I + A S+ + G LPD
Sbjct: 265 YSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPD 324
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
+ I K G+ +EA V++ +EK + P + LIS C++ E K A ++
Sbjct: 325 VQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEK-AFELH 383
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
D+ + I +++++ LC+ D+ A+ L M +G P + ++++I Y K+
Sbjct: 384 DEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKS 443
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
++ A + M S+G++P + Y L+ G G ME+A + E + + +++
Sbjct: 444 ENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQK-GFATTLSF 502
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
+TLI GYCK + A +L EM + P+ Y +I C KA A L ++M+
Sbjct: 503 NTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHC-KAGKMEEANLLFKEMQ 561
Query: 507 LKGL 510
+ L
Sbjct: 562 ERNL 565
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 148/351 (42%), Gaps = 37/351 (10%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI K GK + A E+ GC N T+ IE R A + ++M +
Sbjct: 84 NVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEK 143
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
+P + G +I+ C A+ + + P V + LI E ++
Sbjct: 144 RNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGR-IE 202
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLL------------------- 361
A +LD S I ++++I L + + A T L
Sbjct: 203 EARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFI 262
Query: 362 ----------------SKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
+M+ G P N ++ +I+ + KAG++ A+ + + + + G+
Sbjct: 263 LGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVL 322
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
PDV T + + G G+++EA ++ +E K+ TY +LI G+CK E + A +L
Sbjct: 323 PDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFEL 382
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+EM G+ PN+ YN L+ LC K+ D + A KL + M KGL + +T
Sbjct: 383 HDEMCLKGIAPNIFIYNALVDGLC-KSGDIQRARKLFDGMPEKGLEPDSVT 432
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 120/300 (40%), Gaps = 36/300 (12%)
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G+ G V N TY L R K + A E+M +TG PD +I F + G
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60
Query: 283 AKEAH--------------------VVYTLAREKKM---------------YPPQSVVAF 307
E +++ L + KM P
Sbjct: 61 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120
Query: 308 LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
LI C+E + AL++LD+ + + ++I LC KD+ A LL KM
Sbjct: 121 LIEGYCREHNMGR-ALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS 179
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P V++++I Y+ G + A +L M G+ PD++ Y ++S + G+MEEA
Sbjct: 180 GLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 239
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
L E + + VT+ I GY K + A K +EM D G+ PN Y LI
Sbjct: 240 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 299
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 135/315 (42%), Gaps = 2/315 (0%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
V + + LI ++ G+ + A + + G + Y I LS+ + A +
Sbjct: 184 NVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYL 243
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
++ G PD+ G I + K GK EA + + + P + LI+ +
Sbjct: 244 LEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKA 303
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
++ AL + ++ S+ I L + V A + S++ +G P
Sbjct: 304 GNLME-ALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFT 362
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
++S+IS + K G++ A E+ M +G+ P+++ Y L+ G G ++ A ++ +
Sbjct: 363 YSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMP 422
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+ VTY T+I GYCK E A L +EM GVQP+ YN L+ C K D
Sbjct: 423 EKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHG-CCKEGDM 481
Query: 496 RTAEKLLEDMRLKGL 510
A L +M KG
Sbjct: 482 EKAMNLFREMLQKGF 496
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 141/317 (44%), Gaps = 20/317 (6%)
Query: 190 KEKGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
KEKG++ V + LI+ F K G+ + AFE+ ++ G N Y ++ L +
Sbjct: 352 KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDI 411
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
A + + M E G PDS +I +CK EA ++ K + P V L
Sbjct: 412 QRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL 471
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
+ C+E + K A+++ + + + F+++I C+ + A L +MI++
Sbjct: 472 VHGCCKEGDMEK-AMNLFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQ 529
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR-----------------GLKPDVYTY 411
P + + +VI + KAG M A + K M+ R G+KPD TY
Sbjct: 530 IMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTY 589
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
++ + + EA ++ +E + LI CK E+ A KLL+EM +
Sbjct: 590 GLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGE 649
Query: 472 VGVQPNVDEYNKLIQSL 488
+G++P++ + L++S
Sbjct: 650 LGLKPSLAACSTLVRSF 666
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 123/288 (42%), Gaps = 23/288 (7%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
++ C S E ++L+ + G + + N L+ K G + A +F +
Sbjct: 435 TMIDGYCKSENVAEAFSLFHEMPSKGVQPHSF----VYNALVHGCCKEGDMEKAMNLFRE 490
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G A ++ I+ + A + ++MI +PD +I W CK GK
Sbjct: 491 MLQKG-FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGK 549
Query: 283 AKEAHVVYTLAREKKMY-----------------PPQSVVAFLISSLCQEDETVKLALDM 325
+EA++++ +E+ + P + +I + C+ED V+ A +
Sbjct: 550 MEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVE-AFKL 608
Query: 326 LDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSK 385
D+ G+ +I +LC+ +D+ A LL +M G P A ++++ ++ +
Sbjct: 609 RDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHE 668
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
AG M A + + ++S GL PD T L++G N E+A ++ +
Sbjct: 669 AGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQ 716
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 1/147 (0%)
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
M +G P + + + +A M A + M+ GLKPD + L+ G+ G
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
++E I + ++ +TY+ LI G CK + + A ++L M +G +PN +
Sbjct: 61 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120
Query: 484 LIQSLCLKALDWRTAEKLLEDMRLKGL 510
LI+ C + + A +LL++M + L
Sbjct: 121 LIEGYC-REHNMGRALELLDEMEKRNL 146
>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
Length = 662
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 142/292 (48%), Gaps = 2/292 (0%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
+QE + L++ K A V + M+ G DS +I CK K +EA ++
Sbjct: 238 HQEAVGIWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLH 297
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
+ P L+ + C + ++ +LD E + I + ++I C+
Sbjct: 298 GDMTRRGFKPDLFTFNTLLHAYCNLGK-MEETFHLLDQMKTEGLQPDIVSYGTIIDGHCK 356
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
KD+ AK L++++ G P ++N++I Y + GD++ A++ ++ M+S G++P T
Sbjct: 357 AKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVT 416
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
Y LM + G +EEA I ++A++N+ L + Y +I+GYCKL + A+ EM+
Sbjct: 417 YGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMR 476
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRA 522
G+ PN Y L+ + K+ + A KL ++M G+ + IT + A
Sbjct: 477 SRGISPNKLTYTTLMYAYS-KSGNSEEASKLFDEMVGSGVIPDNITYGTLIA 527
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 173/370 (46%), Gaps = 26/370 (7%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVL-TVEILNELIALFSKLGKGKAAFEVFN 221
A++KA+C + GK V A ++++ E+ G+ TV N L+ K G+ + AF +
Sbjct: 16 AMIKALCKA-GK--VDAGFEMLAELWRA--GLQPTVVTYNVLMDALCKSGRVEEAFRLKG 70
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ G + T+ I L+R + F V ++M + G P+ ++I W C+ G
Sbjct: 71 RMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKG 130
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+A ++ KKM P + +LC+E E ++ A +L+D F
Sbjct: 131 HCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGE-MERAERILEDMLSIGMTVHCGLF 189
Query: 342 SSVIRSLC-RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD------------ 388
++V+ L R + + ++ ++M++ G P + + + + K G
Sbjct: 190 NTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTL 249
Query: 389 -----MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
M A ++++ M ++G++ D TY ++ G +MEEA ++ + + +
Sbjct: 250 NKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDL 309
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
T++TL+ YC L + + LL++MK G+QP++ Y +I C KA D R A++ L
Sbjct: 310 FTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHC-KAKDIRKAKEYLT 368
Query: 504 DMRLKGLHLN 513
++ +GL N
Sbjct: 369 ELMDRGLKPN 378
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 101/203 (49%), Gaps = 8/203 (3%)
Query: 332 EARKYAIKPFS--SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
E+R A+ +S ++I++LC+ V +L+++ G P +N ++ A K+G +
Sbjct: 3 ESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRV 62
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
A + M G+ P V T+ L++G A G + E +L E ++ + V Y+ L
Sbjct: 63 EEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNEL 122
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
I +C+ AL+L +EM ++P YN + ++LC K + AE++LEDM G
Sbjct: 123 IGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALC-KEGEMERAERILEDMLSIG 181
Query: 510 LHL-----NGITRALIRAVKELE 527
+ + N + L++ + LE
Sbjct: 182 MTVHCGLFNTVVAWLLQRTRRLE 204
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 80/164 (48%), Gaps = 2/164 (1%)
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+ ++I A KAG + EML + GL+P V TY LM G++EEA + +
Sbjct: 14 YTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRME 73
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+ S VT+ LI G + E F +L EM+ +GV PN YN+LI C K
Sbjct: 74 QGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKG-HC 132
Query: 496 RTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIENGEALVE 539
A +L ++M LK + +T LI A +E +E E ++E
Sbjct: 133 SQALRLFDEMVLKKMKPTAVTYNLI-AKALCKEGEMERAERILE 175
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 93/255 (36%), Gaps = 40/255 (15%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ LL A C+ +E + L D +K G + V I++ K + A E
Sbjct: 313 NTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDG----HCKAKDIRKAKEYLT 368
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ D G N Y I R A E M G P + G ++ W C G
Sbjct: 369 ELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAG 428
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+EA +++ ARE + V+ + I
Sbjct: 429 LVEEAKTIFSQARENNV--DLGVIGYTI-------------------------------- 454
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+I+ C++ + A +M S G P + +++ AYSK+G+ A ++ M
Sbjct: 455 --MIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVG 512
Query: 402 RGLKPDVYTYTGLMS 416
G+ PD TY L++
Sbjct: 513 SGVIPDNITYGTLIA 527
>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 140/300 (46%), Gaps = 3/300 (1%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
+G+A+ EV + G V + +Y I S + A++ ++M++ G +P
Sbjct: 308 NEGRAS-EVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTY 366
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
+I K + A ++ REK + +I+ CQ + K A + D+
Sbjct: 367 NTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKK-AFALHDEMM 425
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
+ K ++S+I LCR A L K++ +G P + N+++ + G+M
Sbjct: 426 TDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMD 485
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A +LK M + PD TY LM G G+ EEA E++ E K+ + ++Y+TLI
Sbjct: 486 RAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLI 545
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
GY K + A + +EM +G P + YN L++ L K D AE+LL +M+ +G+
Sbjct: 546 SGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLS-KNQDGELAEELLREMKSEGI 604
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 143/330 (43%), Gaps = 12/330 (3%)
Query: 189 EKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
E + V T I+ ++ KL K K + FG + TY ++ S R
Sbjct: 221 EIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIV---TYNTLVQGYSLRGRI 277
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP--PQSVVA 306
+ A + +M G PD + I+SW C G+A E + RE K P SV
Sbjct: 278 EGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRASE------VLREMKGIGLVPDSVSY 331
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
++ C + ++ A D+ + ++++I L + A+ L+ ++
Sbjct: 332 NILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIRE 391
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
+G + +N VI+ Y + GD A + M + G+KP +TYT L+ + E
Sbjct: 392 KGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTRE 451
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A E+ + + V +TL+ G+C D A LL EM + + P+ YN L++
Sbjct: 452 ADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMR 511
Query: 487 SLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
LC + + A +L+ +M+ +G+ + I+
Sbjct: 512 GLCGEG-KFEEARELMGEMKRRGIKPDHIS 540
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 135/288 (46%), Gaps = 1/288 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI S G + AF ++ G V TY I L + A + ++ E
Sbjct: 332 NILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIRE 391
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G + DS +I+ +C+ G AK+A ++ + P Q LI LC+ ++T +
Sbjct: 392 KGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKT-R 450
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A ++ + G+ K + ++++ C ++ A +LL +M P + +N ++
Sbjct: 451 EADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLM 510
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
G A E++ M+ RG+KPD +Y L+SGY+ G + A + +E
Sbjct: 511 RGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFN 570
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ +TY+ L++G K ++ + A +LL EMK G+ PN + +I+++
Sbjct: 571 PTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAM 618
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 107/235 (45%), Gaps = 11/235 (4%)
Query: 292 LAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP---FSSVIRSL 348
+A K+ P+SV L + +V+ D+ D+ + K F ++R
Sbjct: 110 IAVVSKLSSPKSVTQLLKEVVSTRKNSVR---DLFDELVLAHDRLQTKSTILFDFMVRFY 166
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
C+++ V A M +G P N ++S S+ + A M +K +V
Sbjct: 167 CQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNV 226
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNE 468
YT+ +++ G++++A L + + + VTY+TL++GY + A +++E
Sbjct: 227 YTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISE 286
Query: 469 MKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRA 522
MK G QP++ YN ++ +C + A ++L +M+ GL + ++ LIR
Sbjct: 287 MKSKGFQPDLQTYNPILSWMCNEG----RASEVLREMKGIGLVPDSVSYNILIRG 337
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 95/246 (38%), Gaps = 47/246 (19%)
Query: 183 IVKEIGEKEKG-VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEA 241
+++EI +EKG VL N +I + + G K AF + ++ G Q TY I
Sbjct: 385 LIREI--REKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYV 442
Query: 242 LSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPP 301
L RR A + EK++ G PD + ++ C G A + + P
Sbjct: 443 LCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPD 502
Query: 302 QSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP--------------------- 340
L+ LC E + + + GE ++ IKP
Sbjct: 503 DVTYNCLMRGLCGEGK-----FEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHA 557
Query: 341 ------------------FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++++++ L + +D A+ LL +M SEG P ++ F SVI A
Sbjct: 558 FIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEA 617
Query: 383 YSKAGD 388
SK+ +
Sbjct: 618 MSKSDN 623
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 156/361 (43%), Gaps = 14/361 (3%)
Query: 156 VTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKA 215
V + V++ LLK +C + K+ A+ +VK + E V N L+ F + +
Sbjct: 127 VNNIVINQLLKGLCDA--KRLCEAMDILVKRMPELGCTPDVVS-YNTLLKGFCNEKRAEE 183
Query: 216 AFEVFNKFGD---YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGK 272
A E+ + D C N +Y I D A+++ +M++ G P+
Sbjct: 184 ALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTT 243
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS---SLCQEDETVKLALDMLDDF 329
+I CK A V+ +K + P LI S+ + E V+ ML++
Sbjct: 244 VIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVR----MLEEM 299
Query: 330 SGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
S K + S++ LC A+ L MI +G P A++ +I Y+ G +
Sbjct: 300 SAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGAL 359
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
+ ++L LM GL PD + + + + YA ++EA I N+ K+ V Y L
Sbjct: 360 SEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGAL 419
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
I CKL D A+ N+M + GV PN+ +N L+ LC W A++ +M +G
Sbjct: 420 IDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLC-TVDKWEKAKEFYFEMLNQG 478
Query: 510 L 510
+
Sbjct: 479 I 479
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 148/349 (42%), Gaps = 29/349 (8%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+LL +C++ +E L+D + G K V I LI ++ G ++ N
Sbjct: 313 SLLNYLCNNGRCREARFLFDSMIRKGIKPN----VAIYGILIHGYATKGALSEMHDLLNL 368
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ G + + A +++ + D A + KM + G PD G +I CK G+
Sbjct: 369 MVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGR 428
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP-- 340
+A + + + + P V L+ LC D+ K +F E I+P
Sbjct: 429 VDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKA-----KEFYFEMLNQGIRPDV 483
Query: 341 --FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
F++++ +LC V A+ L+ M G PG + ++I + G + A + L +
Sbjct: 484 VFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDV 543
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M S GLKPD +TY L+ GY G++++A + E +N VTY T++ G
Sbjct: 544 MLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRR 603
Query: 459 FDCALKLLNEMKDVGVQPN----------------VDEYNKLIQSLCLK 491
F A +L M G Q N VDE KL QSLC K
Sbjct: 604 FSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSK 652
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 128/289 (44%), Gaps = 1/289 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI + +GK K + + +G + TY + L A + + MI
Sbjct: 277 NCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIR 336
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ G +I + G E H + L E + P + + ++ ++ +
Sbjct: 337 KGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKK-AMID 395
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A+ + + + + + ++I +LC++ V A ++M++EG P VFNS++
Sbjct: 396 EAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLV 455
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
A E M ++G++PDV + ++ GQ+ +A +++ ++ +R
Sbjct: 456 YGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTR 515
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
++Y TLI G+C + D A K L+ M VG++P+ YN L+ C
Sbjct: 516 PGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYC 564
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 109/264 (41%), Gaps = 42/264 (15%)
Query: 253 SVCEKMIETGSL---PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
S+ +MI ++ PD +I FC+ G+ + + L + V+ L+
Sbjct: 77 SLFNRMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLL 136
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
LC + LC D+ L+ +M G
Sbjct: 137 KGLCDA------------------------------KRLCEAMDI-----LVKRMPELGC 161
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLM---RSRGLKPDVYTYTGLMSGYANGGQMEE 426
P +N+++ + A+E+L +M + R P+V +Y +++G+ GQ+++
Sbjct: 162 TPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDK 221
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A + E + + VTY T+I G CK + D A + +M D GV+P+ D YN LI
Sbjct: 222 AYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIH 281
Query: 487 SLCLKALDWRTAEKLLEDMRLKGL 510
L W+ ++LE+M GL
Sbjct: 282 GY-LSIGKWKEVVRMLEEMSAHGL 304
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/308 (20%), Positives = 127/308 (41%), Gaps = 18/308 (5%)
Query: 190 KEKGVLTVEILN--ELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKI 247
K++G L+ +++N LI KLG+ A FN+ + G N + + L
Sbjct: 405 KQQG-LSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDK 463
Query: 248 FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF 307
++ A +M+ G PD I+ C G+ +A + L P
Sbjct: 464 WEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTT 523
Query: 308 LISSLC---QEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTL 360
LI C + DE K +LD++ +KP +++++ CR + A +
Sbjct: 524 LIGGHCLVGRIDEAAK-SLDVM-------LSVGLKPDEWTYNTLLHGYCRAGRIDDAYGV 575
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
+M+ G PG +++++ + A E+ M + G + +++ Y +++G +
Sbjct: 576 FREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSK 635
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
++EA ++ +L T++ +I K + A+ L + G+ P+V
Sbjct: 636 NNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFT 695
Query: 481 YNKLIQSL 488
Y + ++L
Sbjct: 696 YCLIAENL 703
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 96/232 (41%), Gaps = 20/232 (8%)
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
D A + M+ G PD ++ +C+ G+ +A+ V+ + P + +
Sbjct: 535 DEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTI 594
Query: 309 ISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI 365
+ L E +L L+M+ +++ I ++ ++ L + V A L +
Sbjct: 595 LHGLFTTRRFSEAKELYLNMIT----SGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLC 650
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
S+ FN +I A K+G AM + + S GL PDV+TY + G +E
Sbjct: 651 SKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLE 710
Query: 426 EACEILNEAKK-----NHSRLSPVTYHTLIRG--------YCKLEEFDCALK 464
E ++ + +K N L+ + L RG CKL+E + +L+
Sbjct: 711 EFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLE 762
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 74/162 (45%), Gaps = 15/162 (9%)
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM---TPAMEMLKLMRSRGLK-------P 406
A L +++ P FN +++A S+ T E++ + +R ++ P
Sbjct: 33 ALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKVTP 92
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
D TY+ L+ + G++E K+ R++ + + L++G C + A+ +L
Sbjct: 93 DPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDIL 152
Query: 467 -NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRL 507
M ++G P+V YN L++ C + + AE+ LE + +
Sbjct: 153 VKRMPELGCTPDVVSYNTLLKGFC----NEKRAEEALELLHM 190
>gi|357521009|ref|XP_003630793.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524815|gb|AET05269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 584
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 161/360 (44%), Gaps = 17/360 (4%)
Query: 158 SGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAF 217
S + +A++ A S E ++ +KE G K T N LI F +G+ A
Sbjct: 113 SILFNAMINAFSDSGKVHEAMKIFRKMKECGCKP----TTSTFNTLIKGFGIVGRPHEAM 168
Query: 218 EVFNKFGDYGCV-ANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
++ G V N+ TY I+A + + AW+V KM+ +G PD +
Sbjct: 169 KLLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARA 228
Query: 277 FCKGGKAKEAH--VVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR 334
F + G+ A ++ K+ P + +I C+E + AL F + +
Sbjct: 229 FAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTE-ALR----FLYKMK 283
Query: 335 KYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
+ + P F+S+I+ + D G + L+ M G P ++++++A+S +G M
Sbjct: 284 ELGVHPNPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMD 343
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
E+ M ++PD+ Y+ L GY GQ ++A +LN K + + V + T+I
Sbjct: 344 NCEEIFDDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTII 403
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
G+C + DCAL+L +M ++G N+ Y LI W+ AE+LL M G+
Sbjct: 404 SGWCAAGKMDCALRLYEKMNEMGTPLNLKTYETLIWGYGEAKQPWK-AEELLVTMEESGV 462
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 151/315 (47%), Gaps = 9/315 (2%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
TV +L++ + GK A +FN + G TY + AL+R K F+ S+
Sbjct: 42 TVISRTKLMSTLIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLL 101
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISS---L 312
K+ E G PDS +I+ F GK EA ++ +E P S LI +
Sbjct: 102 SKVEENGVKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIV 161
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
+ E +KL M+ D + + + + ++ +I++ C ++ A ++ KM++ G P
Sbjct: 162 GRPHEAMKLLEMMIQDGNVKPNE---RTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPD 218
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMR--SRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
+N++ A+++ G+ A ++ M+ + +KP+ T ++ GY G M EA
Sbjct: 219 IVTYNTLARAFAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRF 278
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
L + K+ +PV +++LI+GY + + D + L M++ G++P+V Y+ ++ +
Sbjct: 279 LYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSS 338
Query: 491 KALDWRTAEKLLEDM 505
L E++ +DM
Sbjct: 339 SGL-MDNCEEIFDDM 352
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 103/187 (55%), Gaps = 4/187 (2%)
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A+ + + + E K I +++++ +L R+K + +LLSK+ G P + +FN++I+
Sbjct: 62 AVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLLSKVEENGVKPDSILFNAMIN 121
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
A+S +G + AM++ + M+ G KP T+ L+ G+ G+ EA ++L E +
Sbjct: 122 AFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLL-EMMIQDGNV 180
Query: 442 SP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
P TY+ LI+ +C E + A ++++M + G+QP++ YN L ++ + AE
Sbjct: 181 KPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNG-ETDNAE 239
Query: 500 KLLEDMR 506
+L+ M+
Sbjct: 240 RLILKMQ 246
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 100/199 (50%), Gaps = 5/199 (2%)
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+ ++ +L R H A T+ + + EG P + ++++A ++ +L +
Sbjct: 47 TKLMSTLIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLLSKVEE 106
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+KPD + +++ +++ G++ EA +I + K+ + + T++TLI+G+ +
Sbjct: 107 NGVKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHE 166
Query: 462 ALKLLNEM-KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RAL 519
A+KLL M +D V+PN YN LIQ+ C K + A ++ M G+ + +T L
Sbjct: 167 AMKLLEMMIQDGNVKPNERTYNILIQAWCTKN-ELEEAWNVMHKMVNSGMQPDIVTYNTL 225
Query: 520 IRAVKELEEDAIENGEALV 538
RA + E +N E L+
Sbjct: 226 ARAFAQNGE--TDNAERLI 242
>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 323
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 129/282 (45%), Gaps = 3/282 (1%)
Query: 232 QETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYT 291
+ Y I L + + A ++ KM ET II CK G A ++T
Sbjct: 41 HQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFT 100
Query: 292 LAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRM 351
+K ++P + +I S C+ A +L D + FS++I +L +
Sbjct: 101 EMHDKGIFPDVITYSGMIDSFCRSGRWTD-AEQLLRDMIERQINPDVVTFSALINALVKE 159
Query: 352 KDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTY 411
V A+ + M+ G P +NS+I + K + A ML M S+ PDV T+
Sbjct: 160 GKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTF 219
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
+ L++GY +++ EI E + + VTY TLI G+C++ + D A LLN M
Sbjct: 220 STLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMIS 279
Query: 472 VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM-RLKGLHL 512
GV PN + ++ SLC K + R A +LED+ + +G HL
Sbjct: 280 SGVAPNYITFQSMLASLCSKK-ELRKAFAILEDLQKSEGHHL 320
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 106/241 (43%), Gaps = 1/241 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V I N +I K G A +F + D G + TY I++ R + A +
Sbjct: 76 VVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLR 135
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
MIE PD +I+ K GK EA +Y + ++P +I C++D
Sbjct: 136 DMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQD 195
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ A MLD + ++ + FS++I C+ K V + +M G +
Sbjct: 196 R-LNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTY 254
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
++I + + GD+ A ++L +M S G+ P+ T+ +++ + ++ +A IL + +K
Sbjct: 255 TTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQK 314
Query: 437 N 437
+
Sbjct: 315 S 315
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 43/215 (20%)
Query: 304 VVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLL 361
VV F L++ LC E ++ AL ++D E + P+ ++I LC+M D A LL
Sbjct: 10 VVTFTTLMNGLCCEGRVLQ-ALALVDRMVEEGHQ----PYGTIINGLCKMGDTESALNLL 64
Query: 362 SKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG 421
SKM ++N++I K G A + M +G+ PDV TY+G+
Sbjct: 65 SKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGM------- 117
Query: 422 GQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEY 481
I +C+ + A +LL +M + + P+V +
Sbjct: 118 ----------------------------IDSFCRSGRWTDAEQLLRDMIERQINPDVVTF 149
Query: 482 NKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ LI +L +K AE++ DM +G+ IT
Sbjct: 150 SALINAL-VKEGKVSEAEEIYGDMLRRGIFPTTIT 183
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 72/160 (45%), Gaps = 34/160 (21%)
Query: 399 MRSRGLKPDVYTYTGLMSGYA---------------------------NG----GQMEEA 427
M G +PDV T+T LM+G NG G E A
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESA 60
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
+L++ ++ H + V Y+ +I CK A L EM D G+ P+V Y+ +I S
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 488 LCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRA-VKE 525
C ++ W AE+LL DM + ++ + +T ALI A VKE
Sbjct: 121 FC-RSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKE 159
>gi|298204849|emb|CBI34156.3| unnamed protein product [Vitis vinifera]
Length = 442
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 153/353 (43%), Gaps = 36/353 (10%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V LN LI F L + AF V K G + T+ I L A + +
Sbjct: 80 VYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFD 139
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
KMI+ G P+ G +I+ CK G A + + P + +I SLC+ D
Sbjct: 140 KMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCK-D 198
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
V A ++ G+ I ++S++ +LC + + TLL++M++ P +F
Sbjct: 199 RQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIF 258
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
++V+ A K G +T A E++ +M RG++PDV TYT LM G+ +M+EA ++ + +
Sbjct: 259 STVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVR 318
Query: 437 NHSRLSPVTYHTLIR-------GYCKLEE---------------------------FDCA 462
++Y TLI G L+E F+
Sbjct: 319 KGFAPDVISYTTLINAGKKDGGGLVSLQEVIGLVKETPDAVKGGAVEVIRKDKMKLFEKG 378
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
LLNEM + + PNV ++ ++ +LC K A +++ M +G+ N +
Sbjct: 379 RTLLNEMVNSKIMPNVVIFSTVVDALC-KEGKVMEAHDVVDMMIKRGVEPNAV 430
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 129/288 (44%), Gaps = 3/288 (1%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
+ ++++ K + S+ +M G P+ + +I+ FC + A V +
Sbjct: 52 LTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGH 111
Query: 299 YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
P + LI LC E + + AL + D E + + + ++I LC++ + A
Sbjct: 112 QPDPTTFTTLIRGLCVEGK-IGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAI 170
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
LL M P ++ S+I + K +T A + M +G+ PD++TYT L+
Sbjct: 171 RLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHAL 230
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
N + + +LN+ + V + T++ CK + A ++++ M GV+P+V
Sbjct: 231 CNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDV 290
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAVKE 525
Y L+ CL++ + A K+ + M KG + I+ LI A K+
Sbjct: 291 VTYTTLMDGHCLQS-EMDEAVKVFDMMVRKGFAPDVISYTTLINAGKK 337
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 7/176 (3%)
Query: 321 LALDMLDD-FSGEARKYAIKP------FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
L + LDD S R + P F+ ++ S+ +MK +L ++M S G PP
Sbjct: 21 LHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNV 80
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
N +I+++ + A +L + G +PD T+T L+ G G++ EA + ++
Sbjct: 81 YTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDK 140
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + VTY TLI G CK+ A++LL M+ QP+V Y +I SLC
Sbjct: 141 MIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLC 196
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
++++ PPP F ++++ +K + + + M S G+ P+VYT L++ + +
Sbjct: 33 FNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCH 92
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
++ A +L + K + P T+ TLIRG C + AL L ++M D G QPNV
Sbjct: 93 LNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVT 152
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDM 505
Y LI LC K + A +LL M
Sbjct: 153 YGTLINGLC-KVGNTSAAIRLLRSM 176
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 171/371 (46%), Gaps = 40/371 (10%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVA-NQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N +IA F G+ +AA ++ + + G +A NQ TY I + D A V ++M+
Sbjct: 518 NTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEML 577
Query: 260 ETGSL-PDSEKVGKIISWFCKGGKAKEA-----------------------HVVYTLARE 295
G + P++ +I +C GK A H ++ R
Sbjct: 578 TKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRG 637
Query: 296 KKMY------------PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
+ Y P LI+ C+E VK AL++ ++ S + + +++
Sbjct: 638 TEAYELVEEMGGKGLAPDVFTYNILINGHCKEG-NVKKALEIFENMSRRGVRATVVTYTA 696
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
+I +L + V L + + G P ++N++I+++S +G++ A E++ M +
Sbjct: 697 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 756
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
+ PD TY LM G G+++EA ++++E + + VTY+TLI GY + AL
Sbjct: 757 IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDAL 816
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITR-ALIRA 522
++ NEM + G P + YN LIQ LC K AE ++++M G+ + T +LI
Sbjct: 817 RIRNEMMNKGFNPTLLTYNALIQGLC-KNGQGDDAENMVKEMVENGITPDDSTYISLIEG 875
Query: 523 VKELEEDAIEN 533
+ +E AI++
Sbjct: 876 LTTEDERAIDD 886
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 77/174 (44%), Gaps = 23/174 (13%)
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
A++P ++ +R RMK LS IS A + ++SA A PA +
Sbjct: 429 AVRPHATSLRLYSRMKS-------LSLPIS------TASLHPLLSALPSA----PAFALF 471
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
M L T+ ++ + G+ A E+L + + ++ VTY+T+I G+C
Sbjct: 472 ADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRPNA----VTYNTVIAGFCSR 527
Query: 457 EEFDCALKLLNEMKDV-GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
AL ++ EM++ G+ PN Y +I C K A K+ ++M KG
Sbjct: 528 GRVQAALDIMREMRERGGIAPNQYTYGTVISGWC-KVGRVDEAVKVFDEMLTKG 580
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 161/349 (46%), Gaps = 10/349 (2%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEIL--NELIALFSKLGKGKAAFEVFN 221
LL+A C G K+ L D +++ G T +I+ N ++ + G+ A E
Sbjct: 199 LLEATCKRSGYKQAMKLLDEMRDKG------CTPDIVTYNVVVNGICQEGRVDDAIEFLK 252
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
YGC N +Y ++ L + ++ A + +M + G P+ +IS+ C+ G
Sbjct: 253 NLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKG 312
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ A V + P L+ + C++ + K A+ LD I +
Sbjct: 313 LVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDK-AMAFLDLMVSRGCYPDIVSY 371
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
++++ +LCR +V A LL ++ +G P +N+VI +KAG A+E+L M S
Sbjct: 372 NTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVS 431
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
+GL+PD+ TY+ + +G ++E+A + + R + V Y+ +I G CK E
Sbjct: 432 KGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHS 491
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
A+ L M G PN Y LI+ L + L + A LL+++ +G+
Sbjct: 492 AIDLFAYMIGNGCMPNESTYTILIEGLAYEGL-IKEARDLLDELCSRGV 539
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 152/329 (46%), Gaps = 46/329 (13%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI G+ A V ++ CV + TY +EA +R + A + ++M +
Sbjct: 162 NTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRD 221
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEA---------------HVVYTLARE---------- 295
G PD +++ C+ G+ +A V Y + +
Sbjct: 222 KGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWED 281
Query: 296 ---------KKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKP---- 340
+K PP +VV F LIS LC++ V+ AL++L+ KY P
Sbjct: 282 AEELMGEMGQKGCPP-NVVTFNMLISFLCRKG-LVEPALEVLEQIP----KYGCTPNSLS 335
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++ ++ + C+ K + A L M+S G P +N++++A ++G++ A+E+L ++
Sbjct: 336 YNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK 395
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+G P + +Y ++ G G+ +EA E+LNE + +TY T+ G C+ + +
Sbjct: 396 DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIE 455
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A++ +++D+G++PN YN +I LC
Sbjct: 456 DAIRAFGKVQDMGIRPNTVLYNAIILGLC 484
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 142/300 (47%), Gaps = 3/300 (1%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
TY I L R A +V ++M+ +PD ++ CK K+A +
Sbjct: 160 TYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM 219
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
R+K P +++ +CQE V A++ L + + ++ V++ LC +
Sbjct: 220 RDKGCTPDIVTYNVVVNGICQEGR-VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAER 278
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
A+ L+ +M +G PP FN +IS + G + PA+E+L+ + G P+ +Y
Sbjct: 279 WEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNP 338
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
L+ + +M++A L+ V+Y+TL+ C+ E D A++LL+++KD G
Sbjct: 339 LLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 398
Query: 474 VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIEN 533
P + YN +I L KA + A +LL +M KGL + IT + I A ED IE+
Sbjct: 399 CAPVLISYNTVIDGL-TKAGKTKEALELLNEMVSKGLQPDIITYSTI-AAGLCREDRIED 456
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 100/225 (44%), Gaps = 4/225 (1%)
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALD 324
PD +++ +C G+ A L E + P LI LC T AL
Sbjct: 124 PDVMAYNAMVAGYCGAGQLDAAR---RLVAEMPVEPDAYTYNTLIRGLCGRGRTAN-ALA 179
Query: 325 MLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
+LD+ + ++ ++ + C+ A LL +M +G P +N V++
Sbjct: 180 VLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGIC 239
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV 444
+ G + A+E LK + S G +P+ +Y ++ G + E+A E++ E + + V
Sbjct: 240 QEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVV 299
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
T++ LI C+ + AL++L ++ G PN YN L+ + C
Sbjct: 300 TFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFC 344
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 13/172 (7%)
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
+RSL R ++ A +++ P ++I S +G A +L
Sbjct: 72 LRSLVRRGELDEAL----RLVGSARRPDAGTCAALIKKLSASGRTAEARRVLA-----AC 122
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
PDV Y +++GY GQ++ A ++ E TY+TLIRG C AL
Sbjct: 123 GPDVMAYNAMVAGYCGAGQLDAARRLVAEMPVEPD---AYTYNTLIRGLCGRGRTANALA 179
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+L+EM P+V Y L+++ C ++ ++ A KLL++MR KG + +T
Sbjct: 180 VLDEMLRRRCVPDVVTYTILLEATCKRS-GYKQAMKLLDEMRDKGCTPDIVT 230
>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 874
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 144/315 (45%), Gaps = 16/315 (5%)
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
AA E+F++ + GC N+ T+ + + + D + M G LP+ I+
Sbjct: 165 AARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIV 224
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV---KLALDM-LDDFS 330
S FC+ G+ ++ + RE+ + P IS+LC+E + + ++ DM LD++
Sbjct: 225 SSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYL 284
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
G R +I ++ +++ C++ + AKTL + +N + + G
Sbjct: 285 GLPRPNSIT-YNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFI 343
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A +LK M +G+ P +Y+Y LM G G + +A I+ K+N VTY L+
Sbjct: 344 EAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLL 403
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT-----AEKLLEDM 505
GYC + + D A LL EM PN N L+ SL W+ AE+LL M
Sbjct: 404 HGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSL------WKMGRISEAEELLRKM 457
Query: 506 RLKGLHLNGITRALI 520
KG L+ +T +I
Sbjct: 458 NEKGYGLDTVTCNII 472
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 158/357 (44%), Gaps = 20/357 (5%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L++A+C S L+D + E G K T IL + + K G E+ N
Sbjct: 151 NLLIRALCDSSCVDAARELFDEMPEKGCKPNE-FTFGIL---VRGYCKAGLTDKGLELLN 206
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+G + N+ Y + + R D + + EKM E G +PD IS CK G
Sbjct: 207 AMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEG 266
Query: 282 KAKEAHVVYT---------LAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
K +A +++ L R + + F L ++ +T+ ++ DD +
Sbjct: 267 KVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLA-- 324
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
+++ ++ ++ L R A+T+L +M +G P +N ++ K G ++ A
Sbjct: 325 ----SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDA 380
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
++ LM+ G+ PD TY L+ GY + G+++ A +L E +N+ + T + L+
Sbjct: 381 KTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHS 440
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
K+ A +LL +M + G + N ++ LC + A ++++ MR+ G
Sbjct: 441 LWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSG-ELDKAIEIVKGMRVHG 496
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 140/339 (41%), Gaps = 25/339 (7%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N ++ F K+G + A +F + +A+ ++Y ++ L R F A +V ++M +
Sbjct: 295 NLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTD 354
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P ++ CK G +A + L + + P L+ C + V
Sbjct: 355 KGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGK-VD 413
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A +L + + ++ SL +M + A+ LL KM +G N ++
Sbjct: 414 AAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIV 473
Query: 381 SAYSKAGDMTPAMEMLKLMRSRG-----------------------LKPDVYTYTGLMSG 417
+G++ A+E++K MR G PD+ TY+ L++G
Sbjct: 474 DGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNG 533
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
G+ EA + E + V Y+ I +CK + A ++L +M+ G +
Sbjct: 534 LCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKS 593
Query: 478 VDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++ YN LI L +K + L+++M+ KG+ N T
Sbjct: 594 LETYNSLILGLGIKNQIFEI-HGLMDEMKEKGISPNICT 631
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 146/343 (42%), Gaps = 24/343 (6%)
Query: 183 IVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEAL 242
++K++ +K G ++ N L+ KLG A + G + TY +
Sbjct: 348 VLKQMTDKGIGP-SIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGY 406
Query: 243 SRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQ 302
D A S+ ++M+ LP++ ++ K G+ EA + EK
Sbjct: 407 CSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDT 466
Query: 303 SVVAFLISSLC---QEDETVKLA------------------LDMLDDFSGEARKYA-IKP 340
++ LC + D+ +++ + ++DD E +
Sbjct: 467 VTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLIT 526
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+S+++ LC+ AK L ++M+ E P + +N I + K G ++ A +LK M
Sbjct: 527 YSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDME 586
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+G + TY L+ G Q+ E +++E K+ + TY+T I+ C+ E+ +
Sbjct: 587 KKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVE 646
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
A LL+EM + PNV + LI++ C K D+ A+++ E
Sbjct: 647 DATNLLDEMMQKNIAPNVFSFKYLIEAFC-KVPDFDMAQEVFE 688
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 104/215 (48%), Gaps = 6/215 (2%)
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P LI +LC + V A ++ D+ + K F ++R C+
Sbjct: 145 PQTYTFNLLIRALC-DSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLE 203
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
LL+ M S G P ++N+++S++ + G + +M++ MR GL PD+ T+ +S
Sbjct: 204 LLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALC 263
Query: 420 NGGQMEEACEILNEAKKNH----SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
G++ +A I ++ + + R + +TY+ +++G+CK+ + A L +++
Sbjct: 264 KEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDL 323
Query: 476 PNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
++ YN +Q L ++ + AE +L+ M KG+
Sbjct: 324 ASLQSYNIWLQGL-VRHGKFIEAETVLKQMTDKGI 357
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 86/175 (49%), Gaps = 5/175 (2%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
K ++ ++ ++ S + + V L M+ G P FN +I A + + A E
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+ M +G KP+ +T+ L+ GY G ++ E+LN + + V Y+T++ +C
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL--KALDWRTAEKLLEDMRL 507
+ D + K++ +M++ G+ P++ +N I +LC K LD A ++ DM L
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLD---ASRIFSDMEL 280
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 38/170 (22%)
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSR----------------------------------- 402
SV+S ++K+ + A +L+RSR
Sbjct: 80 SVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMV 139
Query: 403 --GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G+ P YT+ L+ + ++ A E+ +E + + + T+ L+RGYCK D
Sbjct: 140 LCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTD 199
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
L+LLN M+ GV PN YN ++ S C + + +EK++E MR +GL
Sbjct: 200 KGLELLNAMESFGVLPNKVIYNTIVSSFCREGRN-DDSEKMVEKMREEGL 248
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 117/292 (40%), Gaps = 47/292 (16%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALS-RRKIFDWAWSVCEKMI 259
N I F K GK +AF V GC + ETY I L + +IF+ + ++M
Sbjct: 563 NIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFE-IHGLMDEMK 621
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
E G P+ I + C+G K ++A + +K + P +LI + C+
Sbjct: 622 EKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCK----- 676
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
+ DF A + F + + S+C K+ G +L+ FN +
Sbjct: 677 ------VPDFD-----MAQEVFETAV-SICGQKE--GLYSLM--------------FNEL 708
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
++ AG + A E+L+ + RG + + Y L+ ++E A IL++
Sbjct: 709 LA----AGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGY 764
Query: 440 RLSPVTYHTLIRGYCKL---EEFDCALKLLNEMKDVG-----VQPNVDEYNK 483
P +I G K+ +E + + EM VG V PN + ++
Sbjct: 765 GFDPAALMPVIDGLGKMGNKKEANSFADKMMEMASVGEVANKVDPNARDIHQ 816
>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
Length = 509
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 135/305 (44%), Gaps = 5/305 (1%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
+ K G+ A + + G + Y I+ L + D A + E + G + D
Sbjct: 202 YCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFE--MAAGDVQD 259
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
IS CK GK EA V+ E P +I SLC+ D V A +++
Sbjct: 260 VIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCK-DNRVSEAKELM 318
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP-PPGNAVFNSVISAYSK 385
D + + ++ LC+ + V A +L +M+ G P +++VI K
Sbjct: 319 DQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCK 378
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
A + A +L+ MR G PDV TYT ++ + G+++EA E+ + L V
Sbjct: 379 ADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVA 438
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
Y+ LIRGYC+ + D A+ ++ EM G+QPNV + ++ LC K A L+E M
Sbjct: 439 YNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLC-KESRVEEARLLMEKM 497
Query: 506 RLKGL 510
+ L
Sbjct: 498 NFESL 502
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 147/328 (44%), Gaps = 10/328 (3%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I K+ K A F + GC+ ++ TY + +L + ++ + E+M+ G
Sbjct: 128 VIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKG 187
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P+ +++ +CK G+ +A + + P S+ + LI LC+ D + A
Sbjct: 188 HSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDE-A 246
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++ + +G+ + + ++S I LC+ + AK + KMI G P +N +I +
Sbjct: 247 RELFEMAAGDVQDVIV--YTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYS 304
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL- 441
K ++ A E++ R P V T L+ G ++EEAC IL + R
Sbjct: 305 LCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAP 364
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
S VTY +I G CK + D A +L +M+ G P+V Y +I + C K A +L
Sbjct: 365 SVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFC-KVGRLDEAREL 423
Query: 502 LEDMRLKGLHL-----NGITRALIRAVK 524
+ M +G L N + R RA K
Sbjct: 424 FQRMHERGCALDVVAYNILIRGYCRAAK 451
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 97/243 (39%), Gaps = 9/243 (3%)
Query: 248 FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF 307
F WA + G ++ ++ F G +EA+ V+ P
Sbjct: 4 FQWAKA------RPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGT 57
Query: 308 LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
LI C+ E + A+++L + I F S+IR LC + A + +MI
Sbjct: 58 LIRGFCKA-EQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDM 116
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
P ++ VI K + A + M G PD TYT L+ + E+
Sbjct: 117 KVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQG 176
Query: 428 CEILNEA-KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
+I E K HS VTY T++ GYCK D AL L+ +K G P+ Y+ LI
Sbjct: 177 HQIFEEMLSKGHSP-ELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLID 235
Query: 487 SLC 489
LC
Sbjct: 236 GLC 238
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 111/248 (44%), Gaps = 21/248 (8%)
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--L 308
A+ V + + T PD G +I FCK + +A V L K ++V F L
Sbjct: 36 AYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA--VNLLGEMKAAGITPTIVTFGSL 93
Query: 309 ISSLCQ---EDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLL 361
I LC+ D+ +++ M+D +KP ++ VI LC++ + A +
Sbjct: 94 IRKLCELNFTDKALQIFHQMID--------MKVKPDAFLYTVVIGHLCKINKLDLAASYF 145
Query: 362 SKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG 421
+M+ G P + ++ + KA ++ + M S+G P++ TY +++GY
Sbjct: 146 ERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKA 205
Query: 422 GQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEY 481
G++++A ++ K S Y TLI G CK + D A +L EM VQ +V Y
Sbjct: 206 GRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELF-EMAAGDVQ-DVIVY 263
Query: 482 NKLIQSLC 489
I LC
Sbjct: 264 TSFISGLC 271
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 54/127 (42%), Gaps = 4/127 (3%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
A++ +C + + Y + ++ G V V +I F K+G+ A E+F +
Sbjct: 371 AVIDGLCKADRLDDAYVVLQKMRRAG----CVPDVVTYTAIIDAFCKVGRLDEARELFQR 426
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ GC + Y I R D A ++ E+M G P+ + I+ CK +
Sbjct: 427 MHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESR 486
Query: 283 AKEAHVV 289
+EA ++
Sbjct: 487 VEEARLL 493
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 128/272 (47%), Gaps = 2/272 (0%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
TY I+ ++ + A V + + G PD +I+ FCK G A V+
Sbjct: 297 TYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDG 356
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
K + P + LI L Q+ + AL ++++ + I ++ VI LC+M
Sbjct: 357 LGKGLRPSIVLYNTLIKGLSQQGLILP-ALQLMNEMAENGCLPNIWTYNLVINGLCKMGC 415
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
V A L+ I++G PP +N++I Y K + A EM+ M S+G+ PDV TY
Sbjct: 416 VSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNT 475
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
L++G G+ EE EI ++ + +TY+ ++ CK ++ + A+ LL EMK G
Sbjct: 476 LLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKG 535
Query: 474 VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
++P+V + L C K D A +L M
Sbjct: 536 LKPDVVSFGTLFTGFC-KIGDIDGAYQLFRRM 566
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 117/251 (46%), Gaps = 2/251 (0%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
GC + TY I+ ++ D A + +M G PD +++ CK GK++E
Sbjct: 430 GCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEV 489
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
++ EK P ++ SLC+ + V A+D+L + + K + F ++
Sbjct: 490 MEIFKAMEEKGCTPNIITYNIIVDSLCKA-KKVNEAVDLLGEMKSKGLKPDVVSFGTLFT 548
Query: 347 SLCRMKDVHGAKTLLSKMISE-GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
C++ D+ GA L +M + A +N ++SA+S+ +M AM++ +M++ G
Sbjct: 549 GFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCD 608
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
PD YTY ++ G+ G + + + L E + S T+ ++ C ++ A+ +
Sbjct: 609 PDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGI 668
Query: 466 LNEMKDVGVQP 476
++ M G+ P
Sbjct: 669 IHLMLQKGIVP 679
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 148/349 (42%), Gaps = 25/349 (7%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
+ + GK + A + F + Y C + ++ + L + A V +M + G D
Sbjct: 86 YGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSD 145
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALD 324
I FCK + A + L ++ + VA+ +++ L E A +
Sbjct: 146 VYTYTIRIKSFCKTARPYAA--LRLLRNMPELGCDSNAVAYCTVVAGLYDSGEH-DHARE 202
Query: 325 MLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
+ D+ + F+ ++ LC+ V ++ LL K++ G P FN +
Sbjct: 203 LFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLC 262
Query: 385 KAGDMTPAM---------EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+ G + A+ E L+ M + G +PD TY ++ GY G +++A +L +A
Sbjct: 263 REGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAV 322
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+ TY +LI G+CK + D A+ + + G++P++ YN LI+ L + L
Sbjct: 323 FKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGL-I 381
Query: 496 RTAEKLLEDMRLKG---------LHLNGITR-ALIRAVKELEEDAIENG 534
A +L+ +M G L +NG+ + + L +DAI G
Sbjct: 382 LPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKG 430
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 147/348 (42%), Gaps = 23/348 (6%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
L+ +C E L D + E+G K + +N L+ GK A + +K
Sbjct: 261 TLINGLCLEGRVSEALELVDRMVEMGHKPDLI----TINTLVNGLCLSGKEAEAMLLIDK 316
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+YGC N TY + + + A + KM E D+ K II CK G
Sbjct: 317 MVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 376
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIK 339
A ++ K + LI C D+ KL DM+ K I
Sbjct: 377 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI--------KRKIN 428
Query: 340 P----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
P FS +I S + + A+ L +MI G P + S+I + K + A +M
Sbjct: 429 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 488
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
+ LM S+G P++ T+ L++GY ++++ E+ + VTY+TLI+G+C+
Sbjct: 489 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 548
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
L + + A +L EM V PN+ Y L+ LC D +EK LE
Sbjct: 549 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLC----DNGESEKALE 592
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 135/321 (42%), Gaps = 3/321 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I K G AF +FN+ G N TY I +D + MI+
Sbjct: 367 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 426
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P+ +I F K GK +EA ++ + + P LI C+E+ K A
Sbjct: 427 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK-A 485
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
M+D + I+ F+ +I C+ + L KM G +N++I
Sbjct: 486 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 545
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ + G + A E+ + M SR + P++ TY L+ G + G+ E+A EI + +K+ L
Sbjct: 546 FCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 605
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
Y+ +I G C + D A L + GV+P V YN +I LC K AE L
Sbjct: 606 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKG-PLSEAELLF 664
Query: 503 EDMRLKGLHLNGIT-RALIRA 522
M G +G T LIRA
Sbjct: 665 RKMEEDGHAPDGWTYNILIRA 685
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 147/330 (44%), Gaps = 7/330 (2%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
L+ +I F + K AF K G N T+ I L A + ++M+
Sbjct: 224 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 283
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
E G PD + +++ C GK EA ++ E P +++ +C+ +T
Sbjct: 284 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 343
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
LA+++L K +S +I LC+ + A L ++M +G +N +
Sbjct: 344 -LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNIL 402
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I + AG ++L+ M R + P+V T++ L+ + G++ EA E+ E H
Sbjct: 403 IGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMI--HR 460
Query: 440 RLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
++P +TY +LI G+CK D A ++++ M G PN+ +N LI C KA
Sbjct: 461 GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYC-KANRIDD 519
Query: 498 AEKLLEDMRLKGLHLNGIT-RALIRAVKEL 526
+L M L+G+ + +T LI+ EL
Sbjct: 520 GLELFRKMSLRGVVADTVTYNTLIQGFCEL 549
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 135/278 (48%), Gaps = 6/278 (2%)
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM-Y 299
A+++ K +D ++C++M G + + +I+ FC+ K A + + K+ Y
Sbjct: 195 AIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLA--FSAMGKIIKLGY 252
Query: 300 PPQSVV-AFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
P ++ + LI+ LC E V AL+++D K + ++++ LC A
Sbjct: 253 EPNTITFSTLINGLCLEGR-VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAM 311
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
L+ KM+ G P + V++ K+G AME+L+ M R +K D Y+ ++ G
Sbjct: 312 LLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 371
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G ++ A + NE + + +TY+ LI G+C +D KLL +M + PNV
Sbjct: 372 CKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNV 431
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++ LI S +K R AE+L ++M +G+ + IT
Sbjct: 432 VTFSVLIDSF-VKEGKLREAEELHKEMIHRGIAPDTIT 468
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 132/298 (44%), Gaps = 30/298 (10%)
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE---KKMYPPQSVVAFLISSLCQ 314
MI + LP ++ F K K+ +V L ++ K + ++ +I+ C+
Sbjct: 177 MIHSRPLPTVIDFSRL---FSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCR 233
Query: 315 EDETVKLALDMLDDFS--GEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEG 368
KL L FS G+ K +P FS++I LC V A L+ +M+ G
Sbjct: 234 ---CRKLCLA----FSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 286
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P N++++ +G AM ++ M G +P+ TY +++ GQ A
Sbjct: 287 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 346
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
E+L + ++ + +L V Y +I G CK D A L NEM+ G+ N+ YN LI
Sbjct: 347 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 406
Query: 489 CLKALDWRTAEKLLEDMRLKGLHLNGITRAL----------IRAVKELEEDAIENGEA 536
C A W KLL DM + ++ N +T ++ +R +EL ++ I G A
Sbjct: 407 C-NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 463
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 87/210 (41%), Gaps = 1/210 (0%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
GC N T+ I + D + KM G + D+ +I FC+ GK A
Sbjct: 496 GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVA 555
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
++ +K+ P L+ LC E+ K AL++ + + I ++ +I
Sbjct: 556 KELFQEMVSRKVPPNIVTYKILLDGLCDNGESEK-ALEIFEKIEKSKMELDIGIYNIIIH 614
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
+C V A L + +G PG +N +I K G ++ A + + M G P
Sbjct: 615 GMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAP 674
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKK 436
D +TY L+ + G ++ +++ E K+
Sbjct: 675 DGWTYNILIRAHLGDGDATKSVKLIEELKR 704
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/333 (19%), Positives = 124/333 (37%), Gaps = 37/333 (11%)
Query: 192 KGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDW 250
KG+ T + N LI F G+ ++ N T+ I++ +
Sbjct: 390 KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE 449
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A + ++MI G PD+ +I FCK +A+ + L K P LI+
Sbjct: 450 AEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 509
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
C+ + + L++ S ++++I+ C + ++ AK L +M+S P
Sbjct: 510 GYCKANR-IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVP 568
Query: 371 PGN-----------------------------------AVFNSVISAYSKAGDMTPAMEM 395
P ++N +I A + A ++
Sbjct: 569 PNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 628
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
+ +G+KP V TY ++ G G + EA + + +++ TY+ LIR +
Sbjct: 629 FCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLG 688
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ ++KL+ E+K G + +I L
Sbjct: 689 DGDATKSVKLIEELKRCGFSVDASTIKMVIDML 721
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 91/199 (45%), Gaps = 1/199 (0%)
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A+D+ D + FS + ++ + K L +M +G + +I+
Sbjct: 170 AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMIN 229
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
+ + + A + + G +P+ T++ L++G G++ EA E+++ + +
Sbjct: 230 CFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 289
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+T +TL+ G C + A+ L+++M + G QPN Y ++ +C K+ A +L
Sbjct: 290 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMC-KSGQTALAMEL 348
Query: 502 LEDMRLKGLHLNGITRALI 520
L M + + L+ + ++I
Sbjct: 349 LRKMEERNIKLDAVKYSII 367
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 136/296 (45%), Gaps = 2/296 (0%)
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
N+ +G N + I L R +A SV KM + G PD+ +I+ C
Sbjct: 116 NQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIE 175
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
G+ KEA ++ + P + +I+ LC+ T +AL +L + K +
Sbjct: 176 GEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNT-SMALQLLRKMEEKGCKPNLVA 234
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++++I SLC+ V+ A LLS+M+ G PP +++++ + G + A + M
Sbjct: 235 YTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMV 294
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
R + P+ T+T L+ G G + EA + K + + TY+ L+ GYC + D
Sbjct: 295 GRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMD 354
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A K+L+ M D G P V YN LI C K A+ LL +M K L + +T
Sbjct: 355 EAQKVLDIMVDKGCAPVVHSYNILINGYC-KRRRLDEAKSLLVEMSEKELTPDTVT 409
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 143/329 (43%), Gaps = 9/329 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ C KE L++ + G + + ++N L K G A ++
Sbjct: 166 NTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGL----CKSGNTSMALQLLR 221
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
K + GC N Y I++L + + + A + +M++ G PD I+ FC G
Sbjct: 222 KMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLG 281
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET--VKLALDMLDDFSGEARKYAIK 339
EA +++ + + P L+ LC+E + + + E Y
Sbjct: 282 HLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYT-- 339
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
+++++ C + A+ +L M+ +G P +N +I+ Y K + A +L M
Sbjct: 340 -YNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEM 398
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
+ L PD TY+ LM G G+ +EA + E + +TY TL+ G CK
Sbjct: 399 SEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHL 458
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
D ALKLL M++ ++P++ YN LI+ +
Sbjct: 459 DEALKLLKSMQESKIEPDIVLYNILIEGM 487
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 138/342 (40%), Gaps = 37/342 (10%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
LN LI +L A V K G + T+ I A + +M+
Sbjct: 130 LNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMV 189
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
G PD +I+ CK G A + EK P +I SLC+ D V
Sbjct: 190 RRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCK-DTLV 248
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
A+D+L + + +S+++ C + ++ A L ++M+ P F +
Sbjct: 249 NDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTIL 308
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN------- 432
+ K G ++ A + + M +G +P+ YTY LM GY QM+EA ++L+
Sbjct: 309 VDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGC 368
Query: 433 ---------------------EAKK-----NHSRLSP--VTYHTLIRGYCKLEEFDCALK 464
EAK + L+P VTY TL++G C++ AL
Sbjct: 369 APVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALN 428
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
L EM G+ P++ Y+ L+ LC K A KLL+ M+
Sbjct: 429 LFKEMCSSGLLPDLMTYSTLLDGLC-KHGHLDEALKLLKSMQ 469
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 140/302 (46%), Gaps = 8/302 (2%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
F LG A +FN+ + N T+ ++ L + + A V E M + G+ P+
Sbjct: 277 FCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPN 336
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLAL 323
+ ++ +C + EA V + +K P LI+ C+ DE L +
Sbjct: 337 AYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLV 396
Query: 324 DMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAY 383
+M S + +S++++ LC++ A L +M S G P +++++
Sbjct: 397 EM----SEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGL 452
Query: 384 SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
K G + A+++LK M+ ++PD+ Y L+ G G++E A E+ ++ + + +
Sbjct: 453 CKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTI 512
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
TY +I+G K D A +L +M+D G PN YN +IQ L+ D TA +L++
Sbjct: 513 RTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGF-LQNQDSSTAIRLID 571
Query: 504 DM 505
+M
Sbjct: 572 EM 573
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 108/234 (46%), Gaps = 5/234 (2%)
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
H + T KK PQ+ FL ++ D+ + ML + ++ F +
Sbjct: 45 HHITTSTCTKKRSLPQNNGGFLSNNSISIDDALASFYRMLR----MNPRPSVVEFGRFLG 100
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
S+ + K +L ++M G N +I+ + + A+ +L M G++P
Sbjct: 101 SIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQP 160
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
D T+ L++G G+++EA + NE + + ++Y T+I G CK AL+LL
Sbjct: 161 DAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLL 220
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
+M++ G +PN+ Y +I SLC L A LL +M +G+ + +T + I
Sbjct: 221 RKMEEKGCKPNLVAYTTIIDSLCKDTL-VNDAMDLLSEMVDRGIPPDVVTYSTI 273
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 171/371 (46%), Gaps = 40/371 (10%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVA-NQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N +IA F G+ +AA ++ + + G +A NQ TY I + D A V ++M+
Sbjct: 149 NTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEML 208
Query: 260 ETGSL-PDSEKVGKIISWFCKGGKAKEA-----------------------HVVYTLARE 295
G + P++ +I +C GK A H ++ R
Sbjct: 209 TKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRG 268
Query: 296 KKMY------------PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
+ Y P LI+ C+E VK AL++ ++ S + + +++
Sbjct: 269 TEAYELVEEMGGKGLAPDVFTYNILINGHCKEGN-VKKALEIFENMSRRGVRATVVTYTA 327
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
+I +L + V L + + G P ++N++I+++S +G++ A E++ M +
Sbjct: 328 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 387
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
+ PD TY LM G G+++EA ++++E + + VTY+TLI GY + AL
Sbjct: 388 IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDAL 447
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITR-ALIRA 522
++ NEM + G P + YN LIQ LC K AE ++++M G+ + T +LI
Sbjct: 448 RIRNEMMNKGFNPTLLTYNALIQGLC-KNGQGDDAENMVKEMVENGITPDDSTYISLIEG 506
Query: 523 VKELEEDAIEN 533
+ +E AI++
Sbjct: 507 LTTEDERAIDD 517
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 23/174 (13%)
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
A++P ++ +R L S+M S P A + ++SA A PA +
Sbjct: 60 AVRPHATSLR-------------LYSRMKSLSLPISTASLHPLLSALPSA----PAFALF 102
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
M L T+ ++ + G+ A E+L + R + VTY+T+I G+C
Sbjct: 103 ADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELL----RQMPRPNAVTYNTVIAGFCSR 158
Query: 457 EEFDCALKLLNEMKDV-GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
AL ++ EM++ G+ PN Y +I C K A K+ ++M KG
Sbjct: 159 GRVQAALDIMREMRERGGIAPNQYTYGTVISGWC-KVGRVDEAVKVFDEMLTKG 211
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 150/329 (45%), Gaps = 46/329 (13%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI G+ A V + GCV + TY +EA +R + A + ++M
Sbjct: 160 NTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRA 219
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEA---------------HVVYTLARE---------- 295
G PD +++ C+ G+ +A V Y + +
Sbjct: 220 KGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWED 279
Query: 296 ---------KKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKP---- 340
+K YPP +VV F LIS LC+ V+ A+++LD KY P
Sbjct: 280 AEKLMAEMSQKGYPP-NVVTFNMLISFLCRRG-LVEPAMEVLDQIP----KYGCTPNSLS 333
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++ ++ + C+ K + A + M+S G P +N++++A + G++ A+E+L ++
Sbjct: 334 YNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLK 393
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+G P + +Y ++ G G+ +EA E+LNE + +TY T+ G C+ + +
Sbjct: 394 DKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIE 453
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A++ +++D+G++PN YN ++ LC
Sbjct: 454 EAIRAFCKVQDMGIRPNTVLYNAILLGLC 482
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 163/379 (43%), Gaps = 47/379 (12%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
LL+A C G K+ L D ++ G + N ++ + G+ A E
Sbjct: 197 LLEATCKRSGYKQAMKLLDEMRAKGCAPD----IITYNVVVNGICQEGRVDDAIEFLKSL 252
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
+GC N +Y ++ L + ++ A + +M + G P+ +IS+ C+ G
Sbjct: 253 PSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLV 312
Query: 284 KEAH--------------------VVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLAL 323
+ A +++ ++KKM + V ++S C D
Sbjct: 313 EPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPD------- 365
Query: 324 DMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAY 383
I +++++ +LCR +V A LL ++ +G P +N+VI
Sbjct: 366 --------------IVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGL 411
Query: 384 SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
+KAG A+E+L M ++GL+PD+ TY+ + SG ++EEA + + R +
Sbjct: 412 TKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNT 471
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
V Y+ ++ G CK E A+ L M G PN Y LI+ L + L + A +LL
Sbjct: 472 VLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGL-VKEARELLG 530
Query: 504 DMRLKGLHLNG-ITRALIR 521
++ +G+ G I +A IR
Sbjct: 531 ELCSRGVVSKGLINKAAIR 549
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 170/394 (43%), Gaps = 15/394 (3%)
Query: 139 LETPLVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVE 198
LE L L E++ G AL+K +C+S E + + E V+
Sbjct: 75 LEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEAR------RVLAACEPDVMA-- 126
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
N ++A + G+ AA + D + TY I L R A V + M
Sbjct: 127 -YNAMVAGYCVTGQLDAARRLV---ADMPMEPDSYTYNTLIRGLCGRGRTGNALVVLDDM 182
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+ G +PD ++ CK K+A + R K P +++ +CQE
Sbjct: 183 LRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGR- 241
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
V A++ L + ++ V++ LC + A+ L+++M +G PP FN
Sbjct: 242 VDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNM 301
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+IS + G + PAME+L + G P+ +Y ++ + +M+ A +
Sbjct: 302 LISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRG 361
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
V+Y+TL+ C+ E D A++LL+++KD G P + YN +I L KA + A
Sbjct: 362 CYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGL-TKAGKTKEA 420
Query: 499 EKLLEDMRLKGLHLNGITRALIRAVKELEEDAIE 532
+LL +M KGL + IT + I + ED IE
Sbjct: 421 LELLNEMVTKGLQPDIITYSTISS-GLCREDRIE 453
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 113/257 (43%), Gaps = 13/257 (5%)
Query: 239 IEALSRRKIFDWAWSVCEKM--IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREK 296
+ L RR + A + E M +E + P +I C G+ EA V
Sbjct: 66 LRGLVRRGDLEEALRLVESMSGLEPSAAPGP--CAALIKKLCASGRTAEARRVLAACEPD 123
Query: 297 KMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHG 356
M V + ++ Q D +L DM E Y ++++IR LC
Sbjct: 124 VMAYNAMVAGYCVTG--QLDAARRLVADM----PMEPDSYT---YNTLIRGLCGRGRTGN 174
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A +L M+ G P + ++ A K AM++L MR++G PD+ TY +++
Sbjct: 175 ALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVN 234
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
G G++++A E L + + V+Y+ +++G C E ++ A KL+ EM G P
Sbjct: 235 GICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPP 294
Query: 477 NVDEYNKLIQSLCLKAL 493
NV +N LI LC + L
Sbjct: 295 NVVTFNMLISFLCRRGL 311
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 115/399 (28%), Positives = 181/399 (45%), Gaps = 21/399 (5%)
Query: 104 LENVLSLLQSSVDGYLESSLDS----FELDLHEDFVLKVLETPLVLGENLVCF-FKWVTS 158
+ +L LL SV+ +ES+LDS F + L +FV VL++ + G+ + F F W
Sbjct: 89 VNQILKLLDGSVN--MESNLDSYCSKFLIKLSPNFVAFVLKSDAIRGKPDIAFRFFWWAG 146
Query: 159 GVVDALLKAICSSVGKKEVYAL---WDIVKEI-GE-KEKGVL-TVEILNELIALFSKLGK 212
+ + K C V +V +L +D V+ I GE KEKG L TV N LI F LG
Sbjct: 147 KQKNYIHKIECY-VSLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGM 205
Query: 213 GKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL-PDSEKVG 271
+ V+ + + G + T+ F + L + A V E M E G + PD
Sbjct: 206 VEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVM-ECGKIGPDVVSYN 264
Query: 272 KIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSG 331
+I +CK G K+A +T EK+ P + + C + L + +
Sbjct: 265 TMIKGYCKAGNTKKAMEKFT-DMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEM-- 321
Query: 332 EARKYAIKP--FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
E R I P +S VI LC+ ++ M +G A++ ++I AY K G++
Sbjct: 322 EERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNV 381
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
A+ + + M+ G +PD TY +++G G+++EA E K N ++ + Y +L
Sbjct: 382 NEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSL 441
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
I G K D A K EM + G + YN LI +L
Sbjct: 442 IDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDAL 480
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 134/315 (42%), Gaps = 42/315 (13%)
Query: 212 KGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVG 271
+G + FE NK GC AN Y I+A + + A ++ E+M G PD G
Sbjct: 348 EGSSVFENMNK---KGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYG 404
Query: 272 KIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSG 331
I++ CK G+ EA + C+++E A+
Sbjct: 405 VIVNGLCKSGRLDEAVEYF--------------------EFCKDNEVAVNAMF------- 437
Query: 332 EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
+SS+I L + V A+ +M+ G P + +N++I A +K+G M
Sbjct: 438 ---------YSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEE 488
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
A+ + K M G VYTYT L+SG + EEA ++ + + ++ L
Sbjct: 489 ALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSV 548
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH 511
G C + A K+L+E+ +GV P + +I LC KA A KL + + +G
Sbjct: 549 GLCLSGKVARACKILDELAPMGVIPET-AFEDMINVLC-KAGRTEQACKLADGIVDRGRE 606
Query: 512 LNGITRA-LIRAVKE 525
+ G R LI A+++
Sbjct: 607 VPGRVRTILINALRK 621
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 84/184 (45%), Gaps = 6/184 (3%)
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+S+IRS + V + +M G P FN +++ + + A + ++M
Sbjct: 194 NSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMEC 253
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
+ PDV +Y ++ GY G ++A E + +K + +TY TLI+ FD
Sbjct: 254 GKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDS 313
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE--KLLEDMRLKGLHLN-GITRA 518
L L EM++ G++ Y+ +I LC D RT E + E+M KG N I A
Sbjct: 314 CLHLYQEMEERGLEIPPHAYSLVIGGLC---KDGRTVEGSSVFENMNKKGCKANVAIYTA 370
Query: 519 LIRA 522
LI A
Sbjct: 371 LIDA 374
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 101/250 (40%), Gaps = 18/250 (7%)
Query: 156 VTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKA 215
VT GV+ + +C S E ++ K+ + + + LI K G+
Sbjct: 401 VTYGVI---VNGLCKSGRLDEAVEYFEFCKD----NEVAVNAMFYSSLIDGLGKAGRVDE 453
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A + F + + GC + Y I+AL++ + A + ++M + G +IS
Sbjct: 454 AEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILIS 513
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
K + +EA ++ L +K + P + L LC + + A +LD+ +
Sbjct: 514 GLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVAR-ACKILDELA----P 568
Query: 336 YAIKP---FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
+ P F +I LC+ A L ++ G V +I+A KAG+ A
Sbjct: 569 MGVIPETAFEDMINVLCKAGRTEQACKLADGIVDRGREVPGRVRTILINALRKAGNADLA 628
Query: 393 MEMLKLMRSR 402
M KLM S+
Sbjct: 629 M---KLMHSK 635
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 145/321 (45%), Gaps = 2/321 (0%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
T+ N +I K G+ A VFN+ G + TY + R F A +
Sbjct: 254 TLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIF 313
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
M+ G PD +I + G +A + + + + P + LI+ C+
Sbjct: 314 SDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCR- 372
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ + AL++ D + + +++++ LC+ K + A L +M+ G P
Sbjct: 373 NGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCT 432
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
F ++I + K G+M A+ + +M + +KPD+ TY L+ G+ +ME+A E+ NE
Sbjct: 433 FTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMI 492
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+ ++Y L+ GYC L A +L +EM G++P + N +I+ C ++ D
Sbjct: 493 SRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYC-RSGDL 551
Query: 496 RTAEKLLEDMRLKGLHLNGIT 516
A++ L M +G+ + IT
Sbjct: 552 SKADEFLGKMISEGVGPDSIT 572
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 135/288 (46%), Gaps = 9/288 (3%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + + G A E+ +K + GC + Y + L ++K+ A ++ ++M+E G
Sbjct: 366 LINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERG 425
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+PD +I CK G +A ++ + +K + P LI C+ E
Sbjct: 426 VVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTE----- 480
Query: 323 LDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
++ ++ E I P ++ ++ C + V A L +MI +G P N+
Sbjct: 481 MEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNT 540
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
VI Y ++GD++ A E L M S G+ PD TY L++G+ G M++A ++N+ +
Sbjct: 541 VIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKG 600
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
+ VTY+ ++ G+C+ A +L +M + G+ P+ Y LI
Sbjct: 601 LQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLIN 648
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 137/308 (44%), Gaps = 2/308 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + S+ G A F G V + Y I R + A + +KM+E G
Sbjct: 331 LIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQG 390
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
D I++ CK +A+ ++ E+ + P LI C+E K A
Sbjct: 391 CALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGK-A 449
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
L + + + K I ++ +I C+ ++ A L ++MIS P + + +++
Sbjct: 450 LSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNG 509
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y G ++ A + M +G+KP + T ++ GY G + +A E L +
Sbjct: 510 YCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPD 569
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
+TY+TLI G+ K E D A L+N+M+ G+QP+V YN ++ C + + AE +L
Sbjct: 570 SITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQG-RMQEAELIL 628
Query: 503 EDMRLKGL 510
M +G+
Sbjct: 629 RKMIERGI 636
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 133/301 (44%), Gaps = 2/301 (0%)
Query: 190 KEKGVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
+ KG L ++ N L+ K+G A+EV+N+ G N T + AL +
Sbjct: 142 RRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKI 201
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
D M + G D +I+ +C+ G EA V K + P +
Sbjct: 202 DDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAV 261
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
I+ LC++ V+ A + ++ +++++ CR + AK + S M+ G
Sbjct: 262 INGLCKKGRYVR-AKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRG 320
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P F+S+I S+ G + A+ + M++ GL PD YT L++GY G M EA
Sbjct: 321 VSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEAL 380
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
EI ++ + L V Y+T++ G CK + A L +EM + GV P+ + LI
Sbjct: 381 EIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGH 440
Query: 489 C 489
C
Sbjct: 441 C 441
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 123/276 (44%), Gaps = 14/276 (5%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
+I + + K E + + R K + L+ L + V LA ++ ++ +
Sbjct: 121 LIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMG-WVDLAWEVYNEIARS 179
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
+ + + ++ +LC+ + K L M +G +N++I+AY + G + A
Sbjct: 180 GIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEA 239
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
E++ M +GLKP ++TY +++G G+ A + NE TY+TL+
Sbjct: 240 FEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVE 299
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI----------QSLCLKALDWRTAEKLL 502
C+ F A + ++M GV P++ ++ LI Q+L + D +T+ L+
Sbjct: 300 SCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQAL-MYFRDMKTS-GLV 357
Query: 503 EDMRLKGLHLNGITR-ALIRAVKELEEDAIENGEAL 537
D + + +NG R ++ E+ + +E G AL
Sbjct: 358 PDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCAL 393
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 1/138 (0%)
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
N VF+ +I +Y +A + + K++R +G + L+ G G ++ A E+ N
Sbjct: 115 NLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYN 174
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
E ++ L+ T + ++ CK + D L +M+ G+ ++ YN LI + C +
Sbjct: 175 EIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREG 234
Query: 493 LDWRTAEKLLEDMRLKGL 510
L A +++ M KGL
Sbjct: 235 L-LGEAFEVMNSMSGKGL 251
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 81/207 (39%), Gaps = 1/207 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI F K + + A E++N+ N +Y + A+ + ++MI
Sbjct: 469 NILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIR 528
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P +I +C+ G +A + + P LI+ + E +
Sbjct: 529 KGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVK-GEYMD 587
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A +++ + + + ++ ++ CR + A+ +L KMI G P + + ++I
Sbjct: 588 KAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLI 647
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPD 407
+ Y ++ A M RG PD
Sbjct: 648 NGYVSQDNLKEAFRFHDEMLQRGFVPD 674
>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Vitis vinifera]
Length = 876
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 127/277 (45%), Gaps = 3/277 (1%)
Query: 241 ALSRRKIFDWAWSVCEKMI-ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
A RR A+ V EKM E P+S +I C+ G+ +EA + EK
Sbjct: 215 ANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQ 274
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P LI + C T K A+ MLD+ + +A + ++ +I LCR + A
Sbjct: 275 PSTRTYTVLIKAKCDIGMTDK-AMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANG 333
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
+ KM+ G PG FN++I+ Y K G + A ++L +M KP++ TY LM G
Sbjct: 334 VFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLC 393
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
+ +A +L N VTY+ L+ G+CK + + A + N M G++P+
Sbjct: 394 RVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGF 453
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ LI LC K A +L M KG+ L+ +T
Sbjct: 454 TFTALIDGLC-KLGRLEQANGILGSMVKKGISLDEVT 489
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 152/353 (43%), Gaps = 37/353 (10%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + G+ + AF++ + + GC + TY I+A + D A + ++M
Sbjct: 248 LIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKA 307
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+P+ +I C+ GK +EA+ V+ + + P LI+ C+E V A
Sbjct: 308 CVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVS-A 366
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+L K I+ ++ ++ LCR+ + A LL +++ G P +N ++
Sbjct: 367 FQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDG 426
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ K G + A + M S GL+PD +T+T L+ G G++E+A IL K L
Sbjct: 427 FCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLD 486
Query: 443 PVTYHTLIRGYCKL----------------------EEFDCAL-------------KLLN 467
VT+ LI G+CK+ F+C L +L
Sbjct: 487 EVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLG 546
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
+M G+ P+V + LI+ C +A + + K+LE M+ G N T +I
Sbjct: 547 KMMKYGLVPSVVTHTILIEGHC-RAGETALSLKMLERMKQAGCSPNVYTYTII 598
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 176/416 (42%), Gaps = 41/416 (9%)
Query: 152 FFKWV---TSGVVD-----ALLKAICS----SVGKKEVYALWDIVKEIGEKEKGV----- 194
FFKWV +S D LL + S V +K V L ++E + E GV
Sbjct: 66 FFKWVCRQSSYCYDLDGRIQLLGVLVSRDLFGVAQKAVVLL---IQECEDSENGVVKLMG 122
Query: 195 -----------LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALS 243
L+ + L+ +KL G AF V+ + + G V Y + AL
Sbjct: 123 ALDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALC 182
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY-TLAREKKMYPPQ 302
+ A C K++ G D+ ++ C+ EA V+ +++E+ P
Sbjct: 183 KNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNS 242
Query: 303 SVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
+ LI LC+ +E +L +M++ + + + + ++ +I++ C + A
Sbjct: 243 VTYSILIHGLCEAGRLEEAFQLKQEMVE----KGCQPSTRTYTVLIKAKCDIGMTDKAMK 298
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
+L +M ++ P + +I + G + A + + M GL P + T+ L++GY
Sbjct: 299 MLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYC 358
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
G + A ++L+ +K + + + TY+ L+ G C++ + A LL + D G+ P+
Sbjct: 359 KEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRV 418
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAVKELEEDAIENG 534
YN L+ C K A + M GL +G T ALI + +L NG
Sbjct: 419 TYNILVDGFC-KEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANG 473
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 142/352 (40%), Gaps = 50/352 (14%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+ F K G+ AF +FN G + T+ I+ L + + A + M++
Sbjct: 421 NILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVK 480
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVY--------------------TLAREKKM-- 298
G D +I CK GKAK+ ++ L ++ K+
Sbjct: 481 KGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNE 540
Query: 299 -------------YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVI 345
P LI C+ ET L+L ML+ + ++ +I
Sbjct: 541 ANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETA-LSLKMLERMKQAGCSPNVYTYTIII 599
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
LC V A+T+L M S G P + + ++ A+ KAG + A +++ M G +
Sbjct: 600 NGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQ 659
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP-------VTYHTLIRGYCKLEE 458
P+ + Y+ L+SG+ A + + + LS ++ H +L +
Sbjct: 660 PNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVF-----RLMD 714
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
D ALK+ +E+K GV P D YN L+ LC K A++L +DM GL
Sbjct: 715 VDHALKIRDEIKKCGV-PTEDLYNFLVVGLC-KEGRIIEADQLTQDMVKHGL 764
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 119/299 (39%), Gaps = 12/299 (4%)
Query: 193 GVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAW 252
G++T N LI + K G +AF++ + C N TY +E L R A+
Sbjct: 346 GIIT---FNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAF 402
Query: 253 SVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSL 312
+ ++++ G LPD ++ FCK G+ A ++ + P LI L
Sbjct: 403 LLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGL 462
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIK----PFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
C+ L+ + G K I F+++I C++ L M+
Sbjct: 463 CKLGR-----LEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENR 517
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
FN + A K + A ML M GL P V T+T L+ G+ G+ +
Sbjct: 518 CLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSL 577
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
++L K+ + TY +I G C + A +L M GV PN Y L+++
Sbjct: 578 KMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKA 636
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 93/227 (40%), Gaps = 9/227 (3%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ + A + +G N TY ++A + D A+ + M++ G P+S
Sbjct: 606 GRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIY 665
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA-LDMLDDF 329
++S F A A + + +S+ + + C +L +D
Sbjct: 666 SALLSGFVLSNTAIGARALSSTGD----LDARSLSSEENDNNCLSSHVFRLMDVDHALKI 721
Query: 330 SGEARKYAIKP---FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
E +K + ++ ++ LC+ + A L M+ G P A+ +S+I Y K
Sbjct: 722 RDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKT 780
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+E +KL+ P +Y ++ G N G+++EA +++++
Sbjct: 781 CKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSD 827
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 127/277 (45%), Gaps = 3/277 (1%)
Query: 241 ALSRRKIFDWAWSVCEKMI-ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
A RR A+ V EKM E P+S +I C+ G+ +EA + EK
Sbjct: 238 ANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQ 297
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P LI + C T K A+ MLD+ + +A + ++ +I LCR + A
Sbjct: 298 PSTRTYTVLIKAKCDIGMTDK-AMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANG 356
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
+ KM+ G PG FN++I+ Y K G + A ++L +M KP++ TY LM G
Sbjct: 357 VFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLC 416
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
+ +A +L N VTY+ L+ G+CK + + A + N M G++P+
Sbjct: 417 RVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGF 476
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ LI LC K A +L M KG+ L+ +T
Sbjct: 477 TFTALIDGLC-KLGRLEQANGILGSMVKKGISLDEVT 512
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 152/353 (43%), Gaps = 37/353 (10%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + G+ + AF++ + + GC + TY I+A + D A + ++M
Sbjct: 271 LIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKA 330
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+P+ +I C+ GK +EA+ V+ + + P LI+ C+E V A
Sbjct: 331 CVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVS-A 389
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+L K I+ ++ ++ LCR+ + A LL +++ G P +N ++
Sbjct: 390 FQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDG 449
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ K G + A + M S GL+PD +T+T L+ G G++E+A IL K L
Sbjct: 450 FCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLD 509
Query: 443 PVTYHTLIRGYCKL----------------------EEFDCAL-------------KLLN 467
VT+ LI G+CK+ F+C L +L
Sbjct: 510 EVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLG 569
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
+M G+ P+V + LI+ C +A + + K+LE M+ G N T +I
Sbjct: 570 KMMKYGLVPSVVTHTILIEGHC-RAGETALSLKMLERMKQAGCSPNVYTYTII 621
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 176/416 (42%), Gaps = 41/416 (9%)
Query: 152 FFKWV---TSGVVD-----ALLKAICS----SVGKKEVYALWDIVKEIGEKEKGV----- 194
FFKWV +S D LL + S V +K V L ++E + E GV
Sbjct: 89 FFKWVCRQSSYCYDLDGRIQLLGVLVSRDLFGVAQKAVVLL---IQECEDSENGVVKLMG 145
Query: 195 -----------LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALS 243
L+ + L+ +KL G AF V+ + + G V Y + AL
Sbjct: 146 ALDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALC 205
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY-TLAREKKMYPPQ 302
+ A C K++ G D+ ++ C+ EA V+ +++E+ P
Sbjct: 206 KNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNS 265
Query: 303 SVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
+ LI LC+ +E +L +M++ + + + + ++ +I++ C + A
Sbjct: 266 VTYSILIHGLCEAGRLEEAFQLKQEMVE----KGCQPSTRTYTVLIKAKCDIGMTDKAMK 321
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
+L +M ++ P + +I + G + A + + M GL P + T+ L++GY
Sbjct: 322 MLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYC 381
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
G + A ++L+ +K + + + TY+ L+ G C++ + A LL + D G+ P+
Sbjct: 382 KEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRV 441
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAVKELEEDAIENG 534
YN L+ C K A + M GL +G T ALI + +L NG
Sbjct: 442 TYNILVDGFC-KEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANG 496
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 119/299 (39%), Gaps = 12/299 (4%)
Query: 193 GVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAW 252
G++T N LI + K G +AF++ + C N TY +E L R A+
Sbjct: 369 GIIT---FNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAF 425
Query: 253 SVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSL 312
+ ++++ G LPD ++ FCK G+ A ++ + P LI L
Sbjct: 426 LLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGL 485
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIK----PFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
C+ L+ + G K I F+++I C++ L M+
Sbjct: 486 CKLGR-----LEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENR 540
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
FN + A K + A ML M GL P V T+T L+ G+ G+ +
Sbjct: 541 CLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSL 600
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
++L K+ + TY +I G C + A +L M GV PN Y L+++
Sbjct: 601 KMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKA 659
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 136/347 (39%), Gaps = 56/347 (16%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+ F K G+ AF +FN G + T+ I+ L + + A + M++
Sbjct: 444 NILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVK 503
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVY--------------------TLAREKKM-- 298
G D +I CK GKAK+ ++ L ++ K+
Sbjct: 504 KGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNE 563
Query: 299 -------------YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVI 345
P LI C+ ET L+L ML+ + ++ +I
Sbjct: 564 ANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETA-LSLKMLERMKQAGCSPNVYTYTIII 622
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
LC V A+T+L M S G P + + ++ A+ KAG + A +++ M G +
Sbjct: 623 NGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQ 682
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD--CAL 463
P+ + Y+ L+SG+ A + + + LS EE D C
Sbjct: 683 PNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSS-------------EENDNNC-- 727
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
L NE+K GV P D YN L+ LC K A++L +DM GL
Sbjct: 728 -LSNEIKKCGV-PTEDLYNFLVVGLC-KEGRIIEADQLTQDMVKHGL 771
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/250 (19%), Positives = 95/250 (38%), Gaps = 20/250 (8%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + G+ + ++ + GC N TY I L + A ++ M G
Sbjct: 586 LIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFG 645
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL- 321
P+ ++ K G+ A + + + P + + L+S + +
Sbjct: 646 VSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGAR 705
Query: 322 ALDMLDDF---------------SGEARKYAIKP---FSSVIRSLCRMKDVHGAKTLLSK 363
AL D S E +K + ++ ++ LC+ + A L
Sbjct: 706 ALSSTGDLDARSLSSEENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQD 765
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
M+ G P A+ +S+I Y K +E +KL+ P +Y ++ G N G+
Sbjct: 766 MVKHGLFPDKAI-SSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGR 824
Query: 424 MEEACEILNE 433
++EA +++++
Sbjct: 825 VQEAQKLVSD 834
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 133/287 (46%), Gaps = 2/287 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N+LI + G+ A +F + D C N TY I+ L R+ + A + ++M+E
Sbjct: 262 NQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKNVHK-AMGLLDEMLE 320
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
+PD +I+ C+ G A+ + +L +E+ + P Q I LC+ + V+
Sbjct: 321 RNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNR-VE 379
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A + D + E + +S +I C++ V A L KM+S+ P FN++I
Sbjct: 380 EARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALI 439
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
AG++ A+ + M GLKP VYT+ L+ G ++A + L + + +
Sbjct: 440 HGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEK 499
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
TY+ I YC + A ++ +MK+ GV P+ Y LI++
Sbjct: 500 PVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKA 546
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 150/334 (44%), Gaps = 17/334 (5%)
Query: 182 DIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEA 241
DI +++ + + L+++ NEL+ L ++ G +++ + + + T+ I
Sbjct: 142 DICRKMSKDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINV 201
Query: 242 LSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPP 301
+ A KMI+ G PD I +C+ A V+ + P
Sbjct: 202 YCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVF------EEMPN 255
Query: 302 QSVVAF--LISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHG 356
++ V++ LI LC+ DE V L + M DD + ++++I+ LCR K+VH
Sbjct: 256 RNEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPN----VYTYTALIKGLCR-KNVHK 310
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A LL +M+ P +NS+I+ +AG + A +L LM+ RGL PD TY +
Sbjct: 311 AMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFID 370
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
++EEA + + + + + Y LI GYCK+ + D A L +M P
Sbjct: 371 FLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSP 430
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
N +N LI LC A + + A L + M GL
Sbjct: 431 NAYTFNALIHGLC-SAGNLKEALSLFDQMVKMGL 463
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 164/412 (39%), Gaps = 73/412 (17%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+K +C +K V+ ++ E+ E+ V + N LIA + G +A+ + +
Sbjct: 298 ALIKGLC----RKNVHKAMGLLDEMLERNL-VPDLITYNSLIAGQCRAGHLDSAYRLLSL 352
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ G V +Q TY I+ L + + A + + + E G + +I +CK GK
Sbjct: 353 MKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGK 412
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE----------DETVKLALD-------- 324
EA ++ K P LI LC D+ VK+ L
Sbjct: 413 VDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNI 472
Query: 325 ----MLD--DF------------SGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
ML DF SGE K + +++ I C V A+ ++ +M
Sbjct: 473 LIGRMLKQGDFDDAHKCLQKMMSSGE--KPVARTYNAFIEVYCSAGKVQEAEDMMVQMKE 530
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS---------- 416
EG PP + + S+I AY K G A ++LK M +P +T+ L+
Sbjct: 531 EGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVE 590
Query: 417 -------------GYANGGQM------EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
G G M + E+ E +K+ Y LI G CK+E
Sbjct: 591 KSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVE 650
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
ALKLL++M+ G+ P+ +N +I S C K + A ++EDM G
Sbjct: 651 NLGIALKLLDQMQKEGISPSEMVFNAVI-SCCCKLQKYGEAANIVEDMICSG 701
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 134/313 (42%), Gaps = 29/313 (9%)
Query: 151 CFFKWVTSG------VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEI-LNEL 203
C K ++SG +A ++ CS+ GK V D++ ++ KE+GV + L
Sbjct: 489 CLQKMMSSGEKPVARTYNAFIEVYCSA-GK--VQEAEDMMVQM--KEEGVPPDDFTYTSL 543
Query: 204 IALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG- 262
I + KLG +AF+V D C + T+ I +++FD + V EK ETG
Sbjct: 544 IKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLI-----KQLFDKRYVV-EKSGETGV 597
Query: 263 -SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY---PPQSVVAFLISSLCQEDET 318
S+ + V W K E +V L E + + P LIS +C+ E
Sbjct: 598 ESVSNFGDVPGSNMW-----KMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKV-EN 651
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+ +AL +LD E + F++VI C+++ A ++ MI G P +
Sbjct: 652 LGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKT 711
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I + G+ + K +R G D + L+ G G +EE ++ E +KN
Sbjct: 712 LICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNG 771
Query: 439 SRLSPVTYHTLIR 451
SP TY L +
Sbjct: 772 CNFSPRTYSILTQ 784
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 131/358 (36%), Gaps = 38/358 (10%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+AL+ +CS+ KE +L+D + ++G K TV N LI K G A +
Sbjct: 436 NALIHGLCSAGNLKEALSLFDQMVKMGLKP----TVYTFNILIGRMLKQGDFDDAHKCLQ 491
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
K G TY IE A + +M E G PD +I + K G
Sbjct: 492 KMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLG 551
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK--------------------- 320
A V + P LI L + V+
Sbjct: 552 LTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNM 611
Query: 321 ---LALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
+ D++ + E K+ P + +I +C+++++ A LL +M EG P
Sbjct: 612 WKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSE 671
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
VFN+VIS K A +++ M G P + L+ G G+ E + +
Sbjct: 672 MVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKK 731
Query: 434 AKKNHSRLSPVTYHTLIRGYCK---LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ + + LI G K +EEF +L EM+ G + Y+ L Q L
Sbjct: 732 LRGCGYNDDEIAWKILIDGMLKQGLVEEFS---QLFEEMEKNGCNFSPRTYSILTQKL 786
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 164/377 (43%), Gaps = 20/377 (5%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
LL + +S ++ + + E G K V+ N LI F K G + A +FN+
Sbjct: 194 LLDKMINSNSPVTIWTFYSEILEYGFPPK----VQYYNILINKFCKEGSIRDAKLIFNEI 249
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
G ++ I L + + D + + + M E PD +I CK G+
Sbjct: 250 RKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRL 309
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP--- 340
A ++ +++ + P LI + + +D + + +KP
Sbjct: 310 DVAEQLFDEMQQRGLRPNGITFTALI-----DGQYRSRRMDSAMNTYHQMLTMGVKPDLV 364
Query: 341 -FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
+++++ LC++ DV+ A+ L+ +M G P + ++I Y K GD+ AME+ K M
Sbjct: 365 MYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGM 424
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
G+ D +T L+SG+ G++ +A L E + + TY +I GYCK
Sbjct: 425 NEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNV 484
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRAL 519
KLL EM+ G +P V YN L+ LC K + A LLE M G+ + IT +
Sbjct: 485 KMGFKLLKEMQINGHKPGVITYNVLMNGLC-KQGQMKNANMLLEAMLNLGVTPDDITYNI 543
Query: 520 IRAVKELEEDAIENGEA 536
L E +NG+A
Sbjct: 544 ------LLEGHCKNGKA 554
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 153/333 (45%), Gaps = 13/333 (3%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA 216
T+ + L+ +C S E + L K+ E+ + V + LI K G+ A
Sbjct: 257 TTVSFNTLINGLCKSRNLDEGFRL----KKTMEENRIYPDVFTYSVLIHGLCKEGRLDVA 312
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
++F++ G N T+ I+ R + D A + +M+ G PD +++
Sbjct: 313 EQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNG 372
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
CK G +A + + M P + LI C+E + ++ A+++ + E
Sbjct: 373 LCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGD-LESAMEIRKGMNEEGVVL 431
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
F+++I CR V A+ L +M+ G P +A + VI Y K G++ ++L
Sbjct: 432 DNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLL 491
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYC 454
K M+ G KP V TY LM+G GQM+ A +L EA N ++P +TY+ L+ G+C
Sbjct: 492 KEMQINGHKPGVITYNVLMNGLCKQGQMKNA-NMLLEAMLNLG-VTPDDITYNILLEGHC 549
Query: 455 KLEEFDCALKLLNE---MKDVGVQPN-VDEYNK 483
K + + LKL NE + D + V EYNK
Sbjct: 550 KNGKAEDLLKLRNEKGLIVDYAYYTSLVSEYNK 582
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 76/163 (46%), Gaps = 22/163 (13%)
Query: 355 HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
HG LL KMI+ P F S I Y G P V Y L
Sbjct: 189 HGCGYLLDKMINSNSPVTIWTFYSEILEY-------------------GFPPKVQYYNIL 229
Query: 415 MSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV 474
++ + G + +A I NE +K R + V+++TLI G CK D +L M++ +
Sbjct: 230 INKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRI 289
Query: 475 QPNVDEYNKLIQSLCLKA-LDWRTAEKLLEDMRLKGLHLNGIT 516
P+V Y+ LI LC + LD AE+L ++M+ +GL NGIT
Sbjct: 290 YPDVFTYSVLIHGLCKEGRLD--VAEQLFDEMQQRGLRPNGIT 330
>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Glycine max]
Length = 479
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 122/236 (51%), Gaps = 6/236 (2%)
Query: 283 AKEAHVVYTLAREKKMYP---PQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYA 337
+E HV + ++M P SVV+ LI +LC+ ETV AL + + +
Sbjct: 131 VEENHVKRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQPD 190
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+ ++I LCR+ ++ AK L +M +G + S+I ++ ++ A+ +L+
Sbjct: 191 SYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLE 250
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M+ ++P+V+TY+ LM G GG +A ++L K H + VTY TLI G CK
Sbjct: 251 EMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKER 310
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
+ A+++L+ M+ G++PN Y K+I LC A ++ A +++M L G+ N
Sbjct: 311 KLREAVEILDRMRIQGLKPNAGLYGKIISGLC-AAGSYQEAANFIDEMVLGGISPN 365
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 99/238 (41%), Gaps = 8/238 (3%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI +LG A E+F + G A+ TY I L + D A + E+M
Sbjct: 197 LINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRND 256
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P+ ++ CKGG + +A + + +K P + LI+ LC+E + ++ A
Sbjct: 257 IEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKERK-LREA 315
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA-------V 375
+++LD + K + +I LC A + +M+ G P A +
Sbjct: 316 VEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISPNRASWSLHVRM 375
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
N V+ D A ++ MR+R + ++ T+ L+ + G + +A IL E
Sbjct: 376 HNMVVQGLCNNVDPPRAFQLYLSMRTRCISVEIDTFDCLVKCFCKRGDLHKAARILEE 433
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 79/196 (40%), Gaps = 13/196 (6%)
Query: 352 KDVHGAKTLLSKMISE---GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
KDVH A + +E G + F +IS PA ML+ M+
Sbjct: 26 KDVHKAVNMFDSATAEYGNGFRHDHETFGLIISRLVTVNQFRPAEGMLERMKQEKCMVTE 85
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNE 468
+ + GY + +A + ++ + R + Y T++ + A+ E
Sbjct: 86 DIFLSICRGYGRVHRPLDAIRVFHKMEGFQLRPTQKAYLTILDILVEENHVKRAIGFYRE 145
Query: 469 MKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH---------LNGITR-A 518
M+++G+ +V N LI++LC +A ++ ++M +G +NG+ R
Sbjct: 146 MRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLG 205
Query: 519 LIRAVKELEEDAIENG 534
I KEL ++ + G
Sbjct: 206 NISEAKELFKEMEQKG 221
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 131/278 (47%), Gaps = 1/278 (0%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
AFE+ GC + TY + L R + + +MI G P+ +I
Sbjct: 262 AFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIG 321
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
C+ GK +EA + +EK + P LI+ C+E + LA + L+ +
Sbjct: 322 TLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGR-LDLATEFLEYMISDGCL 380
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
I +++++ LCR A + K+ G PP + +N++ SA +GD A+EM
Sbjct: 381 PDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEM 440
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
+ + ++G+ PD TY L+S G ++EA E+L + + R + V+Y+ ++ G CK
Sbjct: 441 ILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCK 500
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
+ + A+++L M + G QPN Y LI+ + L
Sbjct: 501 VNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGL 538
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 118/281 (41%), Gaps = 5/281 (1%)
Query: 209 KLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSE 268
+GK E+ ++G A Y I + + A V ++M G LPD
Sbjct: 119 NIGKATRVMEILERYGKPDVFA----YNALISGFIKANQLENANRVLDRMKSRGFLPDVV 174
Query: 269 KVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDD 328
+I FC GK A ++ + P LI + D + +A+ +LD+
Sbjct: 175 TYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATIL-DGGIDVAMKLLDE 233
Query: 329 FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD 388
+ + ++++IR +C+ V A LL + S G P +N ++ G
Sbjct: 234 MLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGK 293
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHT 448
+ +++ M S G KP+V T++ L+ G++EEA +L K+ + Y
Sbjct: 294 WSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDP 353
Query: 449 LIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
LI G+C+ D A + L M G P++ YN ++ LC
Sbjct: 354 LIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLC 394
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 141/341 (41%), Gaps = 37/341 (10%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI+ F K + + A V ++ G + + TY I + R D A + E++++
Sbjct: 142 NALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLK 201
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
P +I G A + K + P +I +C+E V
Sbjct: 202 DNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKE-MMVD 260
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A ++L S K I ++ ++R+L + L+S+MIS G P + +I
Sbjct: 261 KAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILI 320
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ G + A+ +L+ M+ +GLKPD Y Y L++G+ G+++ A E L +
Sbjct: 321 GTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCL 380
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV---------------------- 478
V Y+T++ G C+ + D AL++ ++ +VG PNV
Sbjct: 381 PDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEM 440
Query: 479 -----------DE--YNKLIQSLCLKALDWRTAEKLLEDMR 506
DE YN LI LC + A +LL DM+
Sbjct: 441 ILKLLNQGIDPDEITYNSLISCLCRDGM-VDEAIELLVDMQ 480
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 86/165 (52%), Gaps = 1/165 (0%)
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
G T + +++ P +N++IS + KA + A +L M+SRG PDV TY ++
Sbjct: 121 GKATRVMEILERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMI 180
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
+ + G+++ A EI E K++ + +TY LI D A+KLL+EM G++
Sbjct: 181 GSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLE 240
Query: 476 PNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
P+ YN +I+ +C K + A +LL + +G + IT ++
Sbjct: 241 PDTLTYNAIIRGMC-KEMMVDKAFELLRSLSSRGCKPDIITYNIL 284
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 4/123 (3%)
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV 444
+AG ++ L+ M +G PDV T L+ G+ N + +A ++ E + + +
Sbjct: 81 RAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVM-EILERYGKPDVF 139
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA---LDWRTAEKL 501
Y+ LI G+ K + + A ++L+ MK G P+V YN +I S C + L E+L
Sbjct: 140 AYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEEL 199
Query: 502 LED 504
L+D
Sbjct: 200 LKD 202
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 94/235 (40%), Gaps = 11/235 (4%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
L+ +C +E L +KE G K + LIA F + G+ A E
Sbjct: 319 LIGTLCRDGKVEEAVNLLRSMKEKGLKPDAY----CYDPLIAGFCREGRLDLATEFLEYM 374
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
GC+ + Y + L R D A V EK+ E G P+ + S G
Sbjct: 375 ISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDR 434
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKP 340
A + + + P + LIS LC++ DE ++L +DM SG R +
Sbjct: 435 YRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQ---SGRYRPNVVS- 490
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
++ ++ LC++ + A +L+ M +G P + +I +G AME+
Sbjct: 491 YNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMEL 545
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 131/274 (47%), Gaps = 1/274 (0%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A +F+ D+ + + T F ++AL+R + + A+SV +M LP + +I
Sbjct: 58 AVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIE 117
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
F K + V L ++ ++ ++ LC+ + A+ ++ + ++
Sbjct: 118 CFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFE-AMGLIREMGRKSVS 176
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
I ++++I LC+ K + A LL +M + G P + +++ K G M AME+
Sbjct: 177 PDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMEL 236
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
L+ M+ +G DV Y L+SG+ N G ++ E+ +E + VTY L+ G C+
Sbjct: 237 LEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCR 296
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
L ++ A +LN M + G+ P+V Y LI LC
Sbjct: 297 LGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLC 330
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 141/332 (42%), Gaps = 42/332 (12%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
+++ +LK +C + G V+ +++E+G K V N LI K K K A +
Sbjct: 146 IMNIVLKGLCRNGG---VFEAMGLIREMGRKSVSPDIVSY-NTLINGLCKAKKLKEAVGL 201
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
+ GC N T ++ L + D A + E M + G D G +IS FC
Sbjct: 202 LLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCN 261
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
G L R K+++ D+ G+ +
Sbjct: 262 NG---------NLDRGKELF---------------------------DEMLGKGISANVV 285
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
+S ++ LCR+ A T+L+ M G P + +I K G T AM++L LM
Sbjct: 286 TYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLM 345
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
+G +P TY L+SG G + +A +IL + + VTY+TL++G C +
Sbjct: 346 VEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKV 405
Query: 460 DCALKLLNEMKD--VGVQPNVDEYNKLIQSLC 489
D ALKL N M D ++PNV +N LI LC
Sbjct: 406 DEALKLFNSMFDNENCLEPNVFTFNMLIGGLC 437
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 121/293 (41%), Gaps = 1/293 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
L+ LI F+ K + F V G N ++ L R A + +M
Sbjct: 112 LSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMG 171
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
PD +I+ CK K KEA + +P L+ LC+ D +
Sbjct: 172 RKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCK-DGRM 230
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
A+++L+ + + + ++I C ++ K L +M+ +G ++ +
Sbjct: 231 DEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCL 290
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+ + G A +L M G+ PDV TYTGL+ G G+ A ++LN +
Sbjct: 291 VHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGE 350
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
S VTY+ L+ G CK A K+L M + G + +V YN L++ LC K
Sbjct: 351 EPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKG 403
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 142/337 (42%), Gaps = 21/337 (6%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ LL +C + + + ++ E G+K V N L+ GK A ++FN
Sbjct: 358 NVLLSGLCKEGLVIDAFKILRMMIEKGKKAD----VVTYNTLMKGLCDKGKVDEALKLFN 413
Query: 222 K-FGDYGCV-ANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
F + C+ N T+ I L + A + KM++ GS + ++ K
Sbjct: 414 SMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLK 473
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSG---EARKY 336
GK KEA ++ + P + LI C+ + ML+ G E R +
Sbjct: 474 AGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCK--------MRMLNIAKGLFCEMRTH 525
Query: 337 AIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
+ P +++++ SLC+ + AK+L +M + P FN++I KAGD
Sbjct: 526 GLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFV 585
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
E+ M GL+PD T++ L++ + G+++EA L + + Y +L++G
Sbjct: 586 KELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKG 645
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + LL++M G + + ++ LC
Sbjct: 646 LSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLC 682
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 163/417 (39%), Gaps = 48/417 (11%)
Query: 154 KWVTSGVV--DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLG 211
K +++ VV L+ +C KE + + + E G V +++ L K G
Sbjct: 278 KGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGL----CKDG 333
Query: 212 KGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVG 271
+ A ++ N + G + TY + L + + A+ + MIE G D
Sbjct: 334 RATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYN 393
Query: 272 KIISWFCKGGKAKEAHVVYT--LAREKKMYPPQSVVAFLISSLCQE---DETVKLALDML 326
++ C GK EA ++ E + P LI LC+E + VK+ M+
Sbjct: 394 TLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMV 453
Query: 327 DDFS------------GEARKYAIK-------------------PFSSVIRSLCRMKDVH 355
S G + IK +S +I C+M+ ++
Sbjct: 454 KKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLN 513
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
AK L +M + G P +N+++++ K G + A + + M + +PD+ ++ ++
Sbjct: 514 IAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMI 573
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
G G + E+ + + R +T+ TLI KL E D A L M G
Sbjct: 574 DGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFT 633
Query: 476 PNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN-----GITRALIRAVKELE 527
P+ Y+ L++ L K D LL M KG L+ I L +++E++
Sbjct: 634 PDALVYDSLLKGLSSKG-DTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVD 689
>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
Length = 833
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 127/277 (45%), Gaps = 3/277 (1%)
Query: 241 ALSRRKIFDWAWSVCEKMI-ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
A RR A+ V EKM E P+S +I C+ G+ +EA + EK
Sbjct: 172 ANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQ 231
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P LI + C T K A+ MLD+ + +A + ++ +I LCR + A
Sbjct: 232 PSTRTYTVLIKAKCDIGMTDK-AMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANG 290
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
+ KM+ G PG FN++I+ Y K G + A ++L +M KP++ TY LM G
Sbjct: 291 VFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLC 350
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
+ +A +L N VTY+ L+ G+CK + + A + N M G++P+
Sbjct: 351 RVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGF 410
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ LI LC K A +L M KG+ L+ +T
Sbjct: 411 TFTALIDGLC-KLGRLEQANGILGSMVKKGISLDEVT 446
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 152/353 (43%), Gaps = 37/353 (10%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + G+ + AF++ + + GC + TY I+A + D A + ++M
Sbjct: 205 LIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKA 264
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+P+ +I C+ GK +EA+ V+ + + P LI+ C+E V A
Sbjct: 265 CVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVS-A 323
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+L K I+ ++ ++ LCR+ + A LL +++ G P +N ++
Sbjct: 324 FQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDG 383
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ K G + A + M S GL+PD +T+T L+ G G++E+A IL K L
Sbjct: 384 FCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLD 443
Query: 443 PVTYHTLIRGYCKL----------------------EEFDCAL-------------KLLN 467
VT+ LI G+CK+ F+C L +L
Sbjct: 444 EVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLG 503
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
+M G+ P+V + LI+ C +A + + K+LE M+ G N T +I
Sbjct: 504 KMMKYGLVPSVVTHTILIEGHC-RAGETALSLKMLERMKQAGCSPNVYTYTII 555
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 149/337 (44%), Gaps = 10/337 (2%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
L+ +KL G AF V+ + + G V Y + AL + A C K++ G
Sbjct: 99 LLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLG 158
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVY-TLAREKKMYPPQSVVAFLISSLCQE---DET 318
D+ ++ C+ EA V+ +++E+ P + LI LC+ +E
Sbjct: 159 FGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEA 218
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+L +M++ + + + + ++ +I++ C + A +L +M ++ P +
Sbjct: 219 FQLKQEMVE----KGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTI 274
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I + G + A + + M GL P + T+ L++GY G + A ++L+ +K +
Sbjct: 275 LIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGN 334
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
+ + TY+ L+ G C++ + A LL + D G+ P+ YN L+ C K A
Sbjct: 335 CKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFC-KEGQLNMA 393
Query: 499 EKLLEDMRLKGLHLNGIT-RALIRAVKELEEDAIENG 534
+ M GL +G T ALI + +L NG
Sbjct: 394 FNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANG 430
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 142/352 (40%), Gaps = 50/352 (14%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+ F K G+ AF +FN G + T+ I+ L + + A + M++
Sbjct: 378 NILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVK 437
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVY--------------------TLAREKKM-- 298
G D +I CK GKAK+ ++ L ++ K+
Sbjct: 438 KGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNE 497
Query: 299 -------------YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVI 345
P LI C+ ET L+L ML+ + ++ +I
Sbjct: 498 ANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETA-LSLKMLERMKQAGCSPNVYTYTIII 556
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
LC V A+T+L M S G P + + ++ A+ KAG + A +++ M G +
Sbjct: 557 NGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQ 616
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP-------VTYHTLIRGYCKLEE 458
P+ + Y+ L+SG+ A + + + LS ++ H +L +
Sbjct: 617 PNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVF-----RLMD 671
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
D ALK+ +E+K GV P D YN L+ LC K A++L +DM GL
Sbjct: 672 VDHALKIRDEIKKCGV-PTEDLYNFLVVGLC-KEGRIIEADQLTQDMVKHGL 721
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 119/299 (39%), Gaps = 12/299 (4%)
Query: 193 GVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAW 252
G++T N LI + K G +AF++ + C N TY +E L R A+
Sbjct: 303 GIIT---FNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAF 359
Query: 253 SVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSL 312
+ ++++ G LPD ++ FCK G+ A ++ + P LI L
Sbjct: 360 LLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGL 419
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIK----PFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
C+ L+ + G K I F+++I C++ L M+
Sbjct: 420 CKLGR-----LEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENR 474
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
FN + A K + A ML M GL P V T+T L+ G+ G+ +
Sbjct: 475 CLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSL 534
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
++L K+ + TY +I G C + A +L M GV PN Y L+++
Sbjct: 535 KMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKA 593
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 93/227 (40%), Gaps = 9/227 (3%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ + A + +G N TY ++A + D A+ + M++ G P+S
Sbjct: 563 GRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIY 622
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA-LDMLDDF 329
++S F A A + + +S+ + + C +L +D
Sbjct: 623 SALLSGFVLSNTAIGARALSSTGD----LDARSLSSEENDNNCLSSHVFRLMDVDHALKI 678
Query: 330 SGEARKYAIKP---FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
E +K + ++ ++ LC+ + A L M+ G P A+ +S+I Y K
Sbjct: 679 RDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKT 737
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+E +KL+ P +Y ++ G N G+++EA +++++
Sbjct: 738 CKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSD 784
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 159/360 (44%), Gaps = 7/360 (1%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
L+ +C + E W ++E G TV L+ + G+ A +F +
Sbjct: 261 LIHGLCEAGKLHEALEFWARMREDG----CFPTVRTYTVLVCALCESGRELEALSLFGEM 316
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
+ GC N TY I+ L + D A + +M+E G P +I +CK G
Sbjct: 317 RERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMM 376
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
++A V L KK+ P LI C+ +++ A+ +L+ + +++
Sbjct: 377 EDAVGVLGLMESKKVCPNVRTYNELICGFCR-GKSMDRAMALLNKMVESKLSPDVVTYNT 435
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
+I LC + V A L MI +G P FN+ + + G + A ++L+ ++ +
Sbjct: 436 LIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKH 495
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
+K + + YT L+ GY G++E A + + +T++ +I G K + A+
Sbjct: 496 VKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAM 555
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRA 522
L+ +M V+P + YN L++ + LK D+ A ++L + G N +T A I+A
Sbjct: 556 LLVEDMAKFDVKPTLHTYNILVEEV-LKEYDFDRANEILNRLISSGYQPNVVTYTAFIKA 614
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 122/259 (47%), Gaps = 8/259 (3%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMI-ETGS--LPDSEKVGKIISWFCKGGKAKEAHVVY 290
+Y + LSR + D S+ ++M+ + G+ P+ + +++ +CK G A + +
Sbjct: 153 SYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARLFF 212
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
+ P L+ C+ D+ + F R+ A+ ++++I LC
Sbjct: 213 VRILRCEPGPDLFTYTSLVLGYCRNDDVERAC----GVFCVMPRRNAVS-YTNLIHGLCE 267
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+H A ++M +G P + ++ A ++G A+ + MR RG +P+VYT
Sbjct: 268 AGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYT 327
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
YT L+ G+M+EA ++LNE + S V ++ LI YCK + A+ +L M+
Sbjct: 328 YTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLME 387
Query: 471 DVGVQPNVDEYNKLIQSLC 489
V PNV YN+LI C
Sbjct: 388 SKKVCPNVRTYNELICGFC 406
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 130/334 (38%), Gaps = 37/334 (11%)
Query: 191 EKGVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
EKGV +V N LI + K G + A V N TY I R K D
Sbjct: 353 EKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMD 412
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A ++ KM+E+ PD +I C+ G A ++ L P Q +
Sbjct: 413 RAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFM 472
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
LC+ V A +L+ + K ++++I C+ + A +L +M++E
Sbjct: 473 VCLCRMGR-VGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEEC 531
Query: 370 PPGNAVFNSVISAYSKAGDMTPAM-----------------------------------E 394
P + FN +I K G + AM E
Sbjct: 532 LPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANE 591
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+L + S G +P+V TYT + Y + G++EEA E++ + K L Y+ LI Y
Sbjct: 592 ILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYG 651
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ D A +L M G +P+ Y+ L++ L
Sbjct: 652 CMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHL 685
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 75/154 (48%), Gaps = 6/154 (3%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV-FNSVISAYSKAGDMTPAMEMLKLM 399
++S++ CR DV A + M P NAV + ++I +AG + A+E M
Sbjct: 227 YTSLVLGYCRNDDVERACGVFCVM-----PRRNAVSYTNLIHGLCEAGKLHEALEFWARM 281
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
R G P V TYT L+ G+ EA + E ++ + TY LI CK
Sbjct: 282 REDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRM 341
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
D ALK+LNEM + GV P+V +N LI S C + +
Sbjct: 342 DEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGM 375
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 87/395 (22%), Positives = 147/395 (37%), Gaps = 68/395 (17%)
Query: 182 DIVKEIG--EKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI 239
D V +G E +K V NELI F + A + NK + + TY I
Sbjct: 378 DAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLI 437
Query: 240 EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
L + D A + MI G PD + C+ G+ EAH + +EK +
Sbjct: 438 HGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVK 497
Query: 300 PPQSVVAFLISSLCQE---------------DETVKLALD---MLDDFSGEAR------- 334
+ LI C+ +E + ++ M+D E +
Sbjct: 498 ANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLL 557
Query: 335 -----KYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSK 385
K+ +KP ++ ++ + + D A +L+++IS G P + + I AY
Sbjct: 558 VEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCS 617
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
G + A EM+ +++ G+ D + Y L++ Y G ++ A +L S +T
Sbjct: 618 QGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLT 677
Query: 446 YHTLIRG------------------------------YCKLEEFDCALKLLNEMKDVGVQ 475
Y L++ + K++ F L +M + G
Sbjct: 678 YSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKID-FGITTVLFEKMAECGCV 736
Query: 476 PNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
PN++ Y+KLI LC K A L MR G+
Sbjct: 737 PNLNTYSKLINGLC-KVGRLNVAFSLYHHMREGGI 770
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 111/283 (39%), Gaps = 36/283 (12%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVE-ILNELIALFSKLGKGKAAFEVFN 221
A +KA CS +E ++V +I K +GVL I N LI + +G +AF V
Sbjct: 610 AFIKAYCSQGRLEEA---EEMVIKI--KNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLR 664
Query: 222 KFGDYGCVANQETYYFTIEALSRRKI-----------------------------FDWAW 252
+ GC + TY ++ L K F
Sbjct: 665 RMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITT 724
Query: 253 SVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSL 312
+ EKM E G +P+ K+I+ CK G+ A +Y RE + P + + L+SS
Sbjct: 725 VLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSC 784
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
C+ + A+ +LD + ++ + +I L + A+ + ++ G
Sbjct: 785 CKLGMFGE-AVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYD 843
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
+ +I +K G + E+L LM G + TY+ LM
Sbjct: 844 EVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLM 886
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 110/290 (37%), Gaps = 15/290 (5%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
I + G+ + A E+ K + G + + Y I A + D A+ V +M TG
Sbjct: 611 FIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTG 670
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P ++ H+V +++ P V+ S+ D K+
Sbjct: 671 CEPSYLTYSILMK-----------HLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKID 719
Query: 323 LDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+ + + P +S +I LC++ ++ A +L M G P + NS
Sbjct: 720 FGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNS 779
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
++S+ K G A+ +L M + +Y L+ G E+A + +
Sbjct: 780 LLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCG 839
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
V + LI G K D +LLN M+ G + + + Y+ L+Q L
Sbjct: 840 YNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQEL 889
>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 141/297 (47%), Gaps = 3/297 (1%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G V + Y+ + ++ ++ + ++M G P+ I C+ K +EA
Sbjct: 194 GLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEA 253
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
++ L ++ + P + +I C+ V+ A + + + F +++
Sbjct: 254 EKMFELMKKHGVLPNLYTYSAMIDGYCKTG-NVRQAYGLYKEILVAELLPNVVVFGTLVD 312
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
C+ +++ A++L M+ G P V+N +I + K+G+M A+ +L M S L P
Sbjct: 313 GFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSP 372
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
DV+TYT L++G Q+ EA + + K S TY++LI GYCK + AL L
Sbjct: 373 DVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLC 432
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRA 522
+EM GV+PN+ ++ LI C D + A L +M +KG+ + +T ALI A
Sbjct: 433 SEMTASGVEPNIITFSTLIDGYC-NVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDA 488
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 141/324 (43%), Gaps = 5/324 (1%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
A++ C + ++ Y L+ KEI E + V + L+ F K + A +F
Sbjct: 274 AMIDGYCKTGNVRQAYGLY---KEILVAEL-LPNVVVFGTLVDGFCKARELVTARSLFVH 329
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+G N Y I + A + +M PD +I+ C +
Sbjct: 330 MVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQ 389
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
EA+ ++ + ++++P + LI C+E ++ ALD+ + + + I FS
Sbjct: 390 VAEANRLFQKMKNERIFPSSATYNSLIHGYCKE-YNMEQALDLCSEMTASGVEPNIITFS 448
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
++I C ++D+ A L +M +G P + ++I A+ K +M A+ + M
Sbjct: 449 TLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEA 508
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G+ P+ +T+ L+ G+ G++ A + E + S + V + LI G C+ A
Sbjct: 509 GIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRA 568
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQ 486
+ ++M+ G+ P++ Y +++
Sbjct: 569 SRFFSDMRSCGITPDICSYVSMLK 592
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 126/278 (45%), Gaps = 4/278 (1%)
Query: 208 SKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDS 267
+K+ + + FE+ K +G + N TY I+ + A+ + ++++ LP+
Sbjct: 248 NKMEEAEKMFELMKK---HGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNV 304
Query: 268 EKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLD 327
G ++ FCK + A ++ + + P V LI C+ ++ A+ +L
Sbjct: 305 VVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLE-AVGLLS 363
Query: 328 DFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG 387
+ + ++ +I LC V A L KM +E P +A +NS+I Y K
Sbjct: 364 EMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEY 423
Query: 388 DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYH 447
+M A+++ M + G++P++ T++ L+ GY N ++ A + E VTY
Sbjct: 424 NMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYT 483
Query: 448 TLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
LI + K AL+L ++M + G+ PN + L+
Sbjct: 484 ALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLV 521
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 71/164 (43%), Gaps = 3/164 (1%)
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
S++ L R + MIS G P ++ + K G + ++L M S
Sbjct: 169 SILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSL 228
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV-TYHTLIRGYCKLEEFDC 461
G+KP+VY YT + +MEEA E + E K H L + TY +I GYCK
Sbjct: 229 GIKPNVYIYTIYILDLCRDNKMEEA-EKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQ 287
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
A L E+ + PNV + L+ C KA + TA L M
Sbjct: 288 AYGLYKEILVAELLPNVVVFGTLVDGFC-KARELVTARSLFVHM 330
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 94/235 (40%), Gaps = 1/235 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI + K + A ++ ++ G N T+ I+ + A + +M
Sbjct: 413 NSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTI 472
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G +PD +I K KEA +Y+ E ++P A L+ +E +
Sbjct: 473 KGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGR-LS 531
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
+A+D + + + + F+ +I LC+ + A S M S G P + S++
Sbjct: 532 VAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSML 591
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+ + +T M + M G+ P++ L Y G ++ AC + N ++
Sbjct: 592 KGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACFLTNSSR 646
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 171/371 (46%), Gaps = 40/371 (10%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVA-NQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N +IA F G+ +AA ++ + + G +A NQ TY I + D A V ++M+
Sbjct: 523 NTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEML 582
Query: 260 ETGSL-PDSEKVGKIISWFCKGGKAKEA-----------------------HVVYTLARE 295
G + P++ +I +C GK A H ++ R
Sbjct: 583 TKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRG 642
Query: 296 KKMY------------PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
+ Y P LI+ C+E VK AL++ ++ S + + +++
Sbjct: 643 TEAYELVEEMGGKGLAPDVFTYNILINGHCKEGN-VKKALEIFENMSRRGVRATVVTYTA 701
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
+I +L + V L + + G P ++N++I+++S +G++ A E++ M +
Sbjct: 702 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 761
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
+ PD TY LM G G+++EA ++++E + + VTY+TLI GY + AL
Sbjct: 762 IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDAL 821
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITR-ALIRA 522
++ NEM + G P + YN LIQ LC K AE ++++M G+ + T +LI
Sbjct: 822 RIRNEMMNKGFNPTLLTYNALIQGLC-KNGQGDDAENMVKEMVENGITPDDSTYISLIEG 880
Query: 523 VKELEEDAIEN 533
+ +E AI++
Sbjct: 881 LTTEDERAIDD 891
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 23/174 (13%)
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
A++P ++ +R L S+M S P A + ++SA A PA +
Sbjct: 434 AVRPHATSLR-------------LYSRMKSLSLPISTASLHPLLSALPSA----PAFALF 476
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
M L T+ ++ + G+ A E+L + + ++ VTY+T+I G+C
Sbjct: 477 ADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRPNA----VTYNTVIAGFCSR 532
Query: 457 EEFDCALKLLNEMKDV-GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
AL ++ EM++ G+ PN Y +I C K A K+ ++M KG
Sbjct: 533 GRVQAALDIMREMRERGGIAPNQYTYGTVISGWC-KVGRVDEAVKVFDEMLTKG 585
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 160/396 (40%), Gaps = 49/396 (12%)
Query: 152 FFKWVTSGV------VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVL-TVEILNELI 204
F K + SGV + LL+ +C KE L D V + +GVL + N I
Sbjct: 204 FGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIK-----RGVLPNLFTYNLFI 258
Query: 205 ALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL 264
+ G+ A + + G + TY I L + F A KM+ G
Sbjct: 259 QGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLE 318
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALD 324
PDS +I+ +CKGG + A + A P Q LI LC E ET + AL
Sbjct: 319 PDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNR-ALA 377
Query: 325 MLDDFSG------------------------EARKYA-----------IKPFSSVIRSLC 349
+ ++ G EA + A ++ F+ ++ LC
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLC 437
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
+M V A L+ MIS+G P FN +I YS M A+E+L +M G+ PDVY
Sbjct: 438 KMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVY 497
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
TY L++G + E+ E + + T++ L+ C+ + D AL LL EM
Sbjct: 498 TYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEM 557
Query: 470 KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
K+ V P+ + LI C K D A L M
Sbjct: 558 KNKSVNPDAVTFGTLIDGFC-KNGDLDGAYTLFRKM 592
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 121/283 (42%), Gaps = 1/283 (0%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
F K + AA + N GC N Y + + + KM+ +G
Sbjct: 156 FCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLC 215
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
K++ CK G KE + ++ + P I LCQ E + A+ M+
Sbjct: 216 LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGE-LDGAVRMV 274
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
+ K + ++++I LC+ A+ L KM++EG P + +N++I+ Y K
Sbjct: 275 GCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKG 334
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
G + A ++ G PD +TY L+ G + G+ A + NEA + + + Y
Sbjct: 335 GMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+TLI+G A +L NEM + G+ P V +N L+ LC
Sbjct: 395 NTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLC 437
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 139/341 (40%), Gaps = 41/341 (12%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
+ + GK + A VF + Y C +Y + L FD A V +M + G PD
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD 145
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF------------------- 307
+ FCK + A + L +VVA+
Sbjct: 146 VYSFTIRMKSFCKTSRPHAA--LRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYEL 203
Query: 308 ------------------LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLC 349
L+ LC++ + VK +LD + ++ I+ LC
Sbjct: 204 FGKMLASGVSLCLSTFNKLLRVLCKKGD-VKECEKLLDKVIKRGVLPNLFTYNLFIQGLC 262
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
+ ++ GA ++ +I +GP P +N++I K A L M + GL+PD Y
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY 322
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
TY L++GY GG ++ A I+ +A N TY +LI G C E + AL L NE
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA 382
Query: 470 KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
G++PNV YN LI+ L + + A+ L +M KGL
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGMILEAAQ-LANEMSEKGL 422
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 125/292 (42%), Gaps = 11/292 (3%)
Query: 191 EKGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
EKG++ V+ N L+ K+G A + G + T+ I S + +
Sbjct: 419 EKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKME 478
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A + + M++ G PD +++ CK K ++ Y EK P L+
Sbjct: 479 NALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILL 538
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM----- 364
SLC+ + + AL +L++ ++ F ++I C+ D+ GA TL KM
Sbjct: 539 ESLCRYRK-LDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYK 597
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
+S P +N +I A+++ ++T A ++ + M R L PD YTY ++ G+ G +
Sbjct: 598 VSSSTP----TYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNV 653
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
+ L E +N S T +I C + A +++ M G+ P
Sbjct: 654 NLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVP 705
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 145/340 (42%), Gaps = 32/340 (9%)
Query: 216 AFEVFNKF-GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET--GSLPDSEKVGK 272
A E+FN + G TY IE L F+ V M E + + VG
Sbjct: 23 ALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGA 82
Query: 273 IISWFCKGGKAKEAHVVYTLAR----EKKMYPPQSVVAFLISSLCQEDETVKLALDMLDD 328
+ ++ + GK +EA V+ E ++ ++++ L+ S D+ K+ + M
Sbjct: 83 MKNY-GRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDS-GYFDQAHKVYMRM--- 137
Query: 329 FSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
R I P F+ ++S C+ H A LL+ M S+G + +V+ +
Sbjct: 138 -----RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFY 192
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV 444
+ E+ M + G+ + T+ L+ G ++E ++L++ K +
Sbjct: 193 EENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLF 252
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLED 504
TY+ I+G C+ E D A++++ + + G +P+V YN LI LC K ++ AE L
Sbjct: 253 TYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLC-KNSKFQEAEVYLGK 311
Query: 505 MRLKGLHLNGITR----------ALIRAVKELEEDAIENG 534
M +GL + T +++ + + DA+ NG
Sbjct: 312 MVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNG 351
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 157/324 (48%), Gaps = 7/324 (2%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKI-FDWAWSV 254
TV + LI+ + + G + A VFN +YG N TY I+A + + F
Sbjct: 267 TVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKF 326
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSL 312
++M G PD +++ +GG + A ++ +++ Q V ++ L+ ++
Sbjct: 327 FDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRI--EQDVFSYNTLLDAI 384
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
C+ + + LA ++L + + +S+VI + A L +M G
Sbjct: 385 CKGGQ-MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALD 443
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+N+++S Y+K G A+++L+ M S G+K DV TY L+ GY G+ +E ++
Sbjct: 444 RVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFT 503
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
E K+ H + +TY TLI GY K + A+++ E K G++ +V Y+ LI +LC
Sbjct: 504 EMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNG 563
Query: 493 LDWRTAEKLLEDMRLKGLHLNGIT 516
L +A L+++M +G+ N +T
Sbjct: 564 L-VGSAVSLIDEMTKEGISPNVVT 586
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 95/182 (52%), Gaps = 6/182 (3%)
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV--FNSVISAYSKAGDMTPAMEMLKLM 399
S++I +L R V AK + + G GN V F+++ISAY ++G A+ + M
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGY--GNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 400 RSRGLKPDVYTYTGLMSGYANGG-QMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
+ GL+P++ TY ++ GG + ++ + +E ++N + +T+++L+ +
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGL 354
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRA 518
++ A L +EM + ++ +V YN L+ ++C K A ++L M +K + N ++ +
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAIC-KGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 519 LI 520
+
Sbjct: 414 TV 415
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 87/440 (19%), Positives = 179/440 (40%), Gaps = 76/440 (17%)
Query: 145 LGENLVCFFKWVTSGVVDALLKAICSSVGK--KEVYALWDIVKEIGEKEKGVLTVEILNE 202
L NLV + + V+DA C G K+V +D ++ G + + N
Sbjct: 299 LRPNLVTY-----NAVIDA-----CGKGGMEFKQVAKFFDEMQRNGVQPDRI----TFNS 344
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
L+A+ S+ G +AA +F++ + + +Y ++A+ + D A+ + +M
Sbjct: 345 LLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKR 404
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+P+ +I F K G+ EA ++ R + + L+S + + + A
Sbjct: 405 IMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEE-A 463
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
LD+L + + K + +++++ + K + ++M E P ++++I
Sbjct: 464 LDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDG 523
Query: 383 YSKAGDMTPAMEMLKLMRSRGLK-----------------------------------PD 407
YSK G AME+ + +S GL+ P+
Sbjct: 524 YSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPN 583
Query: 408 VYTYTGLMSG------------YANGGQM---EEACEILNEAKKNH-----SRLSPVTYH 447
V TY ++ Y+NGG + A L E + N +L+ + +
Sbjct: 584 VVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNN 643
Query: 448 TLIRGYCK--LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
+ C+ ++E C L++ +M + ++PNV ++ ++ + C + + A LLE++
Sbjct: 644 RTTKD-CEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNA-CSRCNSFEDASMLLEEL 701
Query: 506 RLKGLHLNGITRALIRAVKE 525
RL + G+ L+ +E
Sbjct: 702 RLFDNKVYGVVHGLLMGQRE 721
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 60/147 (40%), Gaps = 35/147 (23%)
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
+++IS + G +T A + + + G VY ++ L+S Y G EEA
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEA--------- 287
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ + N MK+ G++PN+ YN +I + ++++
Sbjct: 288 --------------------------ISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFK 321
Query: 497 TAEKLLEDMRLKGLHLNGITRALIRAV 523
K ++M+ G+ + IT + AV
Sbjct: 322 QVAKFFDEMQRNGVQPDRITFNSLLAV 348
>gi|6633861|gb|AAF19720.1|AC008047_27 F2K11.2 [Arabidopsis thaliana]
Length = 332
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 136/292 (46%), Gaps = 16/292 (5%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGK------------II 274
GC N T+ + +L R A ++ ++M+E G P++ +G+ I+
Sbjct: 5 GCRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNA--MGQSHIKADVVISTAIV 62
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR 334
CK G A ++T EK ++P +I S C A +L +
Sbjct: 63 DRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSD-ADQLLRHMIEKQI 121
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
I FS++I + + + V A+ + +M+ P +NS+I + K + A
Sbjct: 122 NPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKR 181
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
ML M S+G PDV T++ L++GY +++ EI E + + VTY TLI G+C
Sbjct: 182 MLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFC 241
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
++ + D A LLNEM GV P+ ++ ++ LC K + R A +LED++
Sbjct: 242 QVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKK-ELRKAFAILEDLQ 292
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 117/282 (41%), Gaps = 7/282 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGV------LTVEILNELIALFSKLGKGKA 215
+ L+ ++C E AL D + E G + + V I ++ K G
Sbjct: 14 NTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTAIVDRLCKDGNHIN 73
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A +F + + G N TY I++ + A + MIE PD +I+
Sbjct: 74 AQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALIN 133
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
F K K EA +Y ++P +I C++D V A MLD + +
Sbjct: 134 AFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDR-VDDAKRMLDSMASKGCS 192
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+ FS++I C+ K V + +M G + ++I + + GD+ A ++
Sbjct: 193 PDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDL 252
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
L M S G+ PD T+ +++G + ++ +A IL + +K+
Sbjct: 253 LNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKS 294
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 156/330 (47%), Gaps = 12/330 (3%)
Query: 184 VKEIGEKEKGVLTVEIL--NELIALFSKLG---KGKAAFEVFNKFGDYGCVANQETYYFT 238
++ +GE ++ L V+++ + LI+ F G +GKA +F++ + G N Y
Sbjct: 65 MRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKA---LFDEMLEKGISPNVVVYSCL 121
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
I ++ ++ A +V M E G PD +I CK G+A++A ++ L EK
Sbjct: 122 INGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGE 181
Query: 299 YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
P LI+ LC+E + A + + + ++ + ++++I LC + A
Sbjct: 182 EPSTVTYNVLINGLCKEG-CIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240
Query: 359 TLLSKMISEGP--PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
L S ++ +G P FN+VI K G + A+E+ M RG +++T L+
Sbjct: 241 KLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIG 300
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
Y G +++A E+ K S TY +I G+CK+ + A L + MK G+ P
Sbjct: 301 EYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSP 360
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
+ +YN L+ SLC K A +L ++M+
Sbjct: 361 TLFDYNTLMASLC-KESSLEQARRLFQEMK 389
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 147/342 (42%), Gaps = 7/342 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ +C + + +++ + E G++ L V N LI GK A ++F+
Sbjct: 189 NVLINGLCKEGCIGDAFKIFETMLEKGKR----LEVVSYNTLIMGLCNNGKLDEAMKLFS 244
Query: 222 KFGDYGCVANQETYYF--TIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
+ G + F I+ L + D A + + MIE GS + +I + K
Sbjct: 245 SLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIK 304
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
G +A ++ + + P + + +I C+ + A + +
Sbjct: 305 SGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKM-HMLNFAKGLFSRMKISGLSPTLF 363
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
+++++ SLC+ + A+ L +M P FN +I KAGD+ A E+L M
Sbjct: 364 DYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDM 423
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
+ GL PD YTY+ ++ + GQMEEA + + Y +LI+G+ +E
Sbjct: 424 QQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEI 483
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+ + LL +M D+GV +++ N ++ LC A E L
Sbjct: 484 EEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHVMELL 525
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 104/226 (46%), Gaps = 1/226 (0%)
Query: 264 LPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLAL 323
LPD II+ CK + ++A + P L+ LC+E V+ A+
Sbjct: 7 LPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR-VEEAM 65
Query: 324 DMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAY 383
+L + + + + +S++I C + K L +M+ +G P V++ +I+ +
Sbjct: 66 RLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGF 125
Query: 384 SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
K G A +L M RG++PDVYTYT ++ G G+ +A ++ + + S
Sbjct: 126 CKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPST 185
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
VTY+ LI G CK A K+ M + G + V YN LI LC
Sbjct: 186 VTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLC 231
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 114/262 (43%), Gaps = 11/262 (4%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
+Y I L + K + A + +M + P+S ++ CK G+ +EA +
Sbjct: 12 SYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEM 71
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLC 349
+ K + V + LIS C K LD E + I P +S +I C
Sbjct: 72 KRKGLEVDVVVYSTLISGFCS-----KGCLDRGKALFDEMLEKGISPNVVVYSCLINGFC 126
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
+ A +L M G P + +I K G A+++ LM +G +P
Sbjct: 127 KKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTV 186
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
TY L++G G + +A +I + RL V+Y+TLI G C + D A+KL + +
Sbjct: 187 TYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSL 246
Query: 470 KDVG--VQPNVDEYNKLIQSLC 489
+ G V+P+V +N +IQ LC
Sbjct: 247 LEDGNYVEPDVITFNTVIQGLC 268
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 1/141 (0%)
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P +N++I+ K + A+++L M +P+ +TY LM G G++EEA +
Sbjct: 8 PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
L E K+ + V Y TLI G+C D L +EM + G+ PNV Y+ LI C
Sbjct: 68 LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCK 127
Query: 491 KALDWRTAEKLLEDMRLKGLH 511
K L WR A +L M +G+
Sbjct: 128 KGL-WREATAVLHTMTERGIQ 147
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 127/282 (45%), Gaps = 9/282 (3%)
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH 287
C N TY ++ L + + A + +M G D +IS FC G
Sbjct: 41 CEPNSFTYCILMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGK 100
Query: 288 VVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRS 347
++ EK + P V + LI+ C++ + A +L + + + ++ +I
Sbjct: 101 ALFDEMLEKGISPNVVVYSCLINGFCKKG-LWREATAVLHTMTERGIQPDVYTYTCMIGG 159
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
LC+ A L M +G P +N +I+ K G + A ++ + M +G + +
Sbjct: 160 LCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLE 219
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKL 465
V +Y L+ G N G+++EA ++ + ++ + + P +T++T+I+G CK D A+++
Sbjct: 220 VVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEI 279
Query: 466 LNEMKDVGVQPNVDEYNKLI-----QSLCLKALD-WRTAEKL 501
+ M + G N+ + LI + KA++ W+ KL
Sbjct: 280 YDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKL 321
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/263 (19%), Positives = 109/263 (41%), Gaps = 4/263 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + K G A E++ + G V + TY I+ + + ++A + +M +G
Sbjct: 298 LIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISG 357
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P +++ CK ++A ++ +E P +I + + + A
Sbjct: 358 LSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGD-IHSA 416
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++L+D +SS I L ++ + AK MI+ G P N V++S+I
Sbjct: 417 KELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKG 476
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ ++ + +L+ M G+ D+ +++ N + E+L S +
Sbjct: 477 FGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHVMELLPNFSSESSGGT 536
Query: 443 PVTYHTLIRGYCKLEEFDCALKL 465
++ L+ K+++F+ L++
Sbjct: 537 SISCDKLLM---KIQKFNPKLQI 556
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M+ + PD+ +Y +++G ++E+A ++L E + + + TY L+ G CK
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
+ A++LL EMK G++ +V Y+ LI C K R + L ++M KG+ N
Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDR-GKALFDEMLEKGISPN 114
>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g15630, mitochondrial; Flags: Precursor
gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 141/300 (47%), Gaps = 3/300 (1%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
+G+A+ EV + + G V + +Y I S + A++ ++M++ G +P
Sbjct: 307 NEGRAS-EVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTY 365
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
+I K + A ++ REK + LI+ CQ + K A + D+
Sbjct: 366 NTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKK-AFALHDEMM 424
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
+ + ++S+I LCR A L K++ +G P + N+++ + G+M
Sbjct: 425 TDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMD 484
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A +LK M + PD TY LM G G+ EEA E++ E K+ + ++Y+TLI
Sbjct: 485 RAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLI 544
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
GY K + A + +EM +G P + YN L++ L K + AE+LL +M+ +G+
Sbjct: 545 SGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLS-KNQEGELAEELLREMKSEGI 603
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 145/330 (43%), Gaps = 12/330 (3%)
Query: 189 EKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
E + V T I+ ++ KL K K + FG + TY ++ S R
Sbjct: 220 EIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIV---TYNTLVQGFSLRGRI 276
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM--YPPQSVVA 306
+ A + +M G PD + I+SW C G+A E + RE K P SV
Sbjct: 277 EGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE------VLREMKEIGLVPDSVSY 330
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
++ C + +++A D+ + ++++I L + A+ L+ ++
Sbjct: 331 NILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIRE 390
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
+G + +N +I+ Y + GD A + M + G++P +TYT L+ + E
Sbjct: 391 KGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTRE 450
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A E+ + + V +TL+ G+C + D A LL EM + + P+ YN L++
Sbjct: 451 ADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMR 510
Query: 487 SLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
LC + + A +L+ +M+ +G+ + I+
Sbjct: 511 GLCGEG-KFEEARELMGEMKRRGIKPDHIS 539
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 137/288 (47%), Gaps = 1/288 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI S G + AF ++ G V TY I L + A + ++ E
Sbjct: 331 NILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIRE 390
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G + DS +I+ +C+ G AK+A ++ + P Q LI LC++++T +
Sbjct: 391 KGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKT-R 449
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A ++ + G+ K + ++++ C + ++ A +LL +M P + +N ++
Sbjct: 450 EADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLM 509
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
G A E++ M+ RG+KPD +Y L+SGY+ G + A + +E
Sbjct: 510 RGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFN 569
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ +TY+ L++G K +E + A +LL EMK G+ PN + +I+++
Sbjct: 570 PTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAM 617
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 115/248 (46%), Gaps = 5/248 (2%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
++ C+ EA + L +EK YP +++ L + + + D + E
Sbjct: 161 LVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRME 220
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
K + F+ +I LC+ + AK L M G P +N+++ +S G + A
Sbjct: 221 I-KSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGA 279
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
++ M+S+G +PD+ TY ++S N G+ A E+L E K+ V+Y+ LIRG
Sbjct: 280 RLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRG 336
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
+ + A +EM G+ P YN LI L ++ AE L+ ++R KG+ L
Sbjct: 337 CSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMEN-KIEAAEILIREIREKGIVL 395
Query: 513 NGITRALI 520
+ +T ++
Sbjct: 396 DSVTYNIL 403
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 18/246 (7%)
Query: 183 IVKEIGEKEKG-VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEA 241
+++EI +EKG VL N LI + + G K AF + ++ G Q TY I
Sbjct: 384 LIREI--REKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYV 441
Query: 242 LSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY-- 299
L R+ A + EK++ G PD + ++ C G A ++L +E M
Sbjct: 442 LCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRA---FSLLKEMDMMSI 498
Query: 300 -PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDV 354
P L+ LC E + + + GE ++ IKP ++++I + D
Sbjct: 499 NPDDVTYNCLMRGLCGEGK-----FEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDT 553
Query: 355 HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
A + +M+S G P +N+++ SK + A E+L+ M+S G+ P+ ++ +
Sbjct: 554 KHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSV 613
Query: 415 MSGYAN 420
+ +N
Sbjct: 614 IEAMSN 619
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 150/350 (42%), Gaps = 47/350 (13%)
Query: 186 EIGEKEKGVLTVEIL------------NELIALFSKLGKGKAAFEVFNKFGDYGCVANQE 233
+IG+ ++ +LT+E + N +I F ++ A E K G + E
Sbjct: 289 QIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVE 348
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
TY I+ R +F + + E+M E G P+ G +I+ CK GK EA +V
Sbjct: 349 TYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDM 408
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
+ + P ++ LI C + ++ AL D+ S I ++S+I+ LC+M
Sbjct: 409 VGRGVLPNANIYNMLIDGSCTVGK-LREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGK 467
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
+ A+ + + S G P +NS+IS YS AG+ +E+ + M+ GLKP + T+
Sbjct: 468 LKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHP 527
Query: 414 LMSG----------------------------------YANGGQMEEACEILNEAKKNHS 439
L+SG Y G +++A + E
Sbjct: 528 LISGCSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGV 587
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
R TY++LI G+ K + L+++MK G+ P D Y+ LIQ C
Sbjct: 588 RPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHC 637
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 150/328 (45%), Gaps = 1/328 (0%)
Query: 186 EIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRR 245
E ++ K V V + N LI K + + A ++F + V N+ T+ I+ +
Sbjct: 90 ETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKA 149
Query: 246 KIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVV 305
D A + E+M + P ++S CK + +EA + + P
Sbjct: 150 GEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTY 209
Query: 306 AFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI 365
+ + L + D+ ALD+ + G+ K S ++ LC+ V A+ +L ++
Sbjct: 210 SIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLV 269
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
G PG ++N++++ Y + GDM A+ ++ M SRGL+P+ + ++ + ++
Sbjct: 270 EHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMID 329
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
+A E + + S TY+ LI GY +L F ++L EM++ G +PNV Y LI
Sbjct: 330 KAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLI 389
Query: 486 QSLCLKALDWRTAEKLLEDMRLKGLHLN 513
LC K AE +L DM +G+ N
Sbjct: 390 NCLC-KDGKILEAEMVLRDMVGRGVLPN 416
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 102/213 (47%), Gaps = 1/213 (0%)
Query: 308 LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
++ S+C E + ++ D E R + ++ SL K L +M+
Sbjct: 1 MLLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGL 60
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P V+ + A K GD+ AME+ + M+ R + P+V+ Y L+ G ++ +A
Sbjct: 61 GFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDA 120
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
++ E + + VT++TLI GYCK E D A+ L MK V+P++ +N L+
Sbjct: 121 EKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSG 180
Query: 488 LCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
LC KA A +L +++ G +G T ++I
Sbjct: 181 LC-KARRIEEARCMLNEIKCNGFVPDGFTYSII 212
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 118/286 (41%), Gaps = 2/286 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K GK A V G + N Y I+ A ++M + G
Sbjct: 388 LINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNG 447
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+I CK GK KEA ++ L P LIS + K
Sbjct: 448 IGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQK-C 506
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
L++ + K I F +I S C + + +TL ++M+ P V+N++I
Sbjct: 507 LELYETMKKLGLKPTINTFHPLI-SGCSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHC 565
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y + G + A + K M G++PD TY L+ G+ G++ E +++++ K
Sbjct: 566 YQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPE 625
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
TY LI+G+C L++F+ A EM + G PNV N+L L
Sbjct: 626 ADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGL 671
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 2/210 (0%)
Query: 289 VYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSL 348
+Y R++ P V ++ SL E + LD+ + G + + + +
Sbjct: 18 LYDFMRQEGRLPSFGYVRMIVESLV-ESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAA 76
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
++ D+ A L M P V+N +I K + A ++ M R L P+
Sbjct: 77 VKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNR 136
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNE 468
T+ L+ GY G+++ A + KK S +T+++L+ G CK + A +LNE
Sbjct: 137 VTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNE 196
Query: 469 MKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
+K G P+ Y+ + L LK+ D A
Sbjct: 197 IKCNGFVPDGFTYSIIFDGL-LKSDDGAGA 225
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 113/286 (39%), Gaps = 46/286 (16%)
Query: 192 KGVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDW 250
+GVL I N LI +GK + A F++ G A TY I+ L +
Sbjct: 411 RGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKE 470
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A + + TG PD +IS + G +++ +Y ++ + P + LIS
Sbjct: 471 AEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLIS 530
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMIS 366
+E +K + E + + P ++++I V A +L +M+
Sbjct: 531 GCSKEGIKLK------ETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVD 584
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA------- 419
G P N +NS+I + K G ++ +++ M+++GL P+ TY+ L+ G+
Sbjct: 585 MGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNG 644
Query: 420 ----------NG------------------GQMEEACEILNEAKKN 437
NG G+++EA I +E N
Sbjct: 645 AYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIAN 690
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 47/243 (19%), Positives = 96/243 (39%), Gaps = 6/243 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
++L+K +C KE ++ ++ G V N LI+ +S G + E++
Sbjct: 456 NSLIKGLCKMGKLKEAEEMFFLITSTGH----CPDVITYNSLISGYSNAGNSQKCLELYE 511
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G T++ I S+ I ++ +M++ PD +I + + G
Sbjct: 512 TMKKLGLKPTINTFHPLISGCSKEGI-KLKETLFNEMLQMNLSPDRVVYNAMIHCYQETG 570
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
++A + + + P LI +E + + D++DD + +
Sbjct: 571 HVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETK-DLVDDMKAKGLIPEADTY 629
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
S +I+ C +KD +GA +M+ G P + N + + K G + A + M +
Sbjct: 630 SLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIA 689
Query: 402 RGL 404
G+
Sbjct: 690 NGM 692
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 144/317 (45%), Gaps = 2/317 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V +I K+G+ AA +F K G+ GC + TY I++L + + + A +
Sbjct: 10 VHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFS 69
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
M G P+ +I C + +EA + + P + LI+ C+E
Sbjct: 70 YMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEG 129
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ A +L + + + +SS++ +V A+ L MI++G P +
Sbjct: 130 NVFE-ARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSY 188
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N +I+ Y KA + A ++ M +GL PD+ +Y L+ G G++ EA ++
Sbjct: 189 NILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLT 248
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
N + TY L+ G+CK A +L M+ ++PN+ YN LI ++C K+ + +
Sbjct: 249 NGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMC-KSRNLK 307
Query: 497 TAEKLLEDMRLKGLHLN 513
A KL ++ ++GL N
Sbjct: 308 EARKLFSELFVQGLQPN 324
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 122/252 (48%), Gaps = 2/252 (0%)
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M+ G PD II+ CK G+ A ++ E P + +I SLC+ D
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCK-DR 59
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
V ALD+ + I ++S+I+ LC A +L++M+S P F+
Sbjct: 60 RVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFS 119
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+I+ + K G++ A +LK M G++P+V TY+ LM+GY+ ++ EA ++ +
Sbjct: 120 LLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITK 179
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
+ +Y+ LI GYCK + A +L NEM G+ P++ YN LI LC + R
Sbjct: 180 GCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLC-QLGRLRE 238
Query: 498 AEKLLEDMRLKG 509
A L ++M G
Sbjct: 239 AHDLFKNMLTNG 250
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 155/326 (47%), Gaps = 3/326 (0%)
Query: 190 KEKGVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
+++GV V I N LI + + + A ++F++ + V + TY I+ +
Sbjct: 203 RKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGEL 262
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
D A+ + E+M E P+ ++S CK K KEA + P + L
Sbjct: 263 DAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSIL 322
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
L + D+ A+++ + + + + S ++ LC+ V A+ +L K G
Sbjct: 323 FDGLLRCDDG-NGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENG 381
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
++N+ ++ Y + GDM A+ ++ M S GL+P+ T+ L+ + + +M++A
Sbjct: 382 LVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAE 441
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
E + + + S TY+TLI GY KL FD ++L +M+++GV+PNV Y LI L
Sbjct: 442 EWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCL 501
Query: 489 CLKALDWRTAEKLLEDMRLKGLHLNG 514
C K AE +L DM +G+ N
Sbjct: 502 C-KDGKILEAEIVLRDMICRGVLPNA 526
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 149/331 (45%), Gaps = 5/331 (1%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
+ + L+ +C ++ ++D + I V ++ N LI + K+G+ AAF++
Sbjct: 213 IYNVLIGGLCREKRIRDAEKMFDEMCNINL----VGSIVTYNTLIDGYCKVGELDAAFKM 268
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
+ + N T+ + L + + A S+ ++M G +PD + +
Sbjct: 269 RERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLR 328
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
A +Y A EK + + L++ LC++ + V+ A ++L F+
Sbjct: 329 CDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGK-VEKAEEILKKFTENGLVADEV 387
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
+++ + CR+ D++ A + +M S G P + FNS+I + +M A E +K M
Sbjct: 388 IYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKM 447
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
+G+ P V TY L+ GY + +IL + ++ + + V+Y +LI CK +
Sbjct: 448 AEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKI 507
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
A +L +M GV PN YN LI C+
Sbjct: 508 LEAEIVLRDMICRGVLPNAQVYNMLIDGSCM 538
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 126/306 (41%), Gaps = 9/306 (2%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
L+ K GK + A E+ KF + G VA++ Y + R + A E+M G
Sbjct: 357 LLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFG 416
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISS---LCQEDETV 319
P+S +I FC + +A EK + P LI LC D
Sbjct: 417 LRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCF 476
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
++ L+ K + + S+I LC+ + A+ +L MI G P V+N +
Sbjct: 477 QI----LEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNML 532
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I G + A+ M + P + TY L+ G G++ EA + L + +
Sbjct: 533 IDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGH 592
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
+TY++LI GY L L MK++G++P V Y+ LI + ++ E
Sbjct: 593 SPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIEL--VE 650
Query: 500 KLLEDM 505
KL +M
Sbjct: 651 KLYNEM 656
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 11/170 (6%)
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
++ I A K ++ ME L MR RG++P+V+ Y L+ G ++ +A ++ +E
Sbjct: 178 MYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEM 237
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
+ S VTY+TLI GYCK+ E D A K+ MK+ V PN+ +N L+ LC K
Sbjct: 238 CNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLC-KMRK 296
Query: 495 WRTAEKLLEDMRLKGLHLNGITRALI----------RAVKELEEDAIENG 534
+ A LL++M + G +G T +++ EL E A E G
Sbjct: 297 MKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKG 346
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 132/333 (39%), Gaps = 36/333 (10%)
Query: 191 EKGVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
EKGV +VE N LI + KL F++ + + G N +Y I L +
Sbjct: 449 EKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKIL 508
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A V MI G LP+++ +I C GK K+A + ++ P LI
Sbjct: 509 EAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLI 568
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR----------------------- 346
LC++ + + A D L + + ++S+I
Sbjct: 569 DGLCKKGKLTE-AEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGI 627
Query: 347 -----------SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
S C + + + L ++M+ P V+N++I Y++ G+ A +
Sbjct: 628 KPTVRTYHPLISGCSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSL 687
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
+ M +G+ PD TY L+ G+ G++ +++N K TY L++G+C
Sbjct: 688 HQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCD 747
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
L++F A EM + PN N+L L
Sbjct: 748 LKDFSGAYVWYREMVENNFLPNASICNELTAGL 780
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 97/198 (48%), Gaps = 9/198 (4%)
Query: 317 ETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
+ +K+ ++ LD RK ++P ++ +I LCR K + A+ + +M +
Sbjct: 190 QNLKMGMEFLDSM----RKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGS 245
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+N++I Y K G++ A +M + M+ + + P++ T+ L+SG +M+EA +L
Sbjct: 246 IVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLK 305
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
E + N TY L G + ++ + A++L + + G++ N + L+ LC K
Sbjct: 306 EMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLC-KQ 364
Query: 493 LDWRTAEKLLEDMRLKGL 510
AE++L+ GL
Sbjct: 365 GKVEKAEEILKKFTENGL 382
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 112/248 (45%), Gaps = 2/248 (0%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
++S CK +EA +Y R P ++ L S L E + VK+ +D+ +
Sbjct: 112 LLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKV-VDLFMEIENS 170
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
+ ++ I++ +++++ L M G P ++N +I + + A
Sbjct: 171 GFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDA 230
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
+M M + L + TY L+ GY G+++ A ++ K+ + +T+++L+ G
Sbjct: 231 EKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSG 290
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
CK+ + A LL EM+ G P+ Y+ L L L+ D A +L E KG+ +
Sbjct: 291 LCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGL-LRCDDGNGAMELYEQATEKGIRI 349
Query: 513 NGITRALI 520
N T +++
Sbjct: 350 NNYTGSIL 357
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 135/289 (46%), Gaps = 1/289 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI G+ A V + GCV + TY +EA +R + A + ++M +
Sbjct: 156 NTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRD 215
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD +++ C+ G+ +A P ++ LC E +
Sbjct: 216 KGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTA-ERWE 274
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A ++ + S + R + F+ +I LCR V A +L ++ G P + +N ++
Sbjct: 275 DAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPIL 334
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
A+ K M AM ++LM S G PD+ +Y L++ GG+++ A E+L++ K
Sbjct: 335 HAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCT 394
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
++Y+T+I G K + + AL+LLNEM G+QP++ Y+ + LC
Sbjct: 395 PVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLC 443
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 170/398 (42%), Gaps = 53/398 (13%)
Query: 133 DFVLKVLETPLVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEK 192
D L VL+ L G C VT + LL+A C G K+ L D +++ G
Sbjct: 169 DNALAVLDDMLRRG----CVPDVVTYTI---LLEATCKRSGYKQAVKLLDEMRDKGCAPD 221
Query: 193 GVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAW 252
+ N ++ + G+ A E YGC N +Y ++ L + ++ A
Sbjct: 222 ----IVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAE 277
Query: 253 SVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH--------------------VVYTL 292
+ +M G P+ +IS+ C+ G + A +++
Sbjct: 278 KLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAF 337
Query: 293 AREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMK 352
++KKM + V ++SS C D I +++++ +LCR
Sbjct: 338 CKQKKMDRAMAFVELMVSSGCYPD---------------------IVSYNTLLTALCRGG 376
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT 412
+V A LL ++ +G P +N+VI +KAG A+E+L M ++GL+PD+ TY+
Sbjct: 377 EVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYS 436
Query: 413 GLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
+ SG G++EEA + + + R + V Y+ ++ G CK A+ L M
Sbjct: 437 TISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSN 496
Query: 473 GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
G PN Y LI+ L + L + A +++ ++ +G+
Sbjct: 497 GCMPNESTYTILIEGLAYEGL-VKEAREMMAELCSRGV 533
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 134/287 (46%), Gaps = 2/287 (0%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
TY I L R D A +V + M+ G +PD ++ CK K+A +
Sbjct: 154 TYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEM 213
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
R+K P +++ +CQE V A++ L + ++ V++ LC +
Sbjct: 214 RDKGCAPDIVTYNVVVNGICQEGR-VDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAER 272
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
A+ L+++M +G PP FN +IS + G + PAME+L + G P+ +Y
Sbjct: 273 WEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNP 332
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
++ + +M+ A + + V+Y+TL+ C+ E D A++LL+++KD G
Sbjct: 333 ILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKG 392
Query: 474 VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
P + YN +I L KA A +LL +M KGL + IT + I
Sbjct: 393 CTPVLISYNTVIDGL-TKAGKTEEALELLNEMVTKGLQPDIITYSTI 438
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 109/256 (42%), Gaps = 12/256 (4%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSE-KVGKIISWFCKGGKAKEAHVVYTLAREKK 297
+ L RR + A + E M G P + +I C G+ EA V
Sbjct: 63 LRVLVRRGDLEEAIRLVESM--AGLEPSAAGPCAALIKKLCASGRTAEARRVLASCEPDV 120
Query: 298 MYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGA 357
M V + ++ Q D +L M E Y ++++IR LC A
Sbjct: 121 MSYNAMVAGYCVTG--QLDNARRLVAAM----PMEPDTYT---YNTLIRGLCGRGRTDNA 171
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
+L M+ G P + ++ A K A+++L MR +G PD+ TY +++G
Sbjct: 172 LAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNG 231
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
G++++A E L + V+Y+ +++G C E ++ A KL+ EM G PN
Sbjct: 232 ICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPN 291
Query: 478 VDEYNKLIQSLCLKAL 493
V +N LI LC + L
Sbjct: 292 VVTFNMLISFLCRRGL 307
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 139/303 (45%), Gaps = 43/303 (14%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI KLG+ A+E+F + GC+ + T+ IEALS D A + +MIE G
Sbjct: 165 LIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERG 224
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P E +I CK GK EA+ +Y Q+VVA ++ T ++A
Sbjct: 225 YEPYLEVQDSLIFALCKAGKVDEANEIY-----------QTVVA-------KKVATSRVA 266
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++S++ C++ V LL +M+ P +N +++
Sbjct: 267 ------------------YNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAG 308
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+S+A + A+E+ KL+ S G KP+ TYT ++ G + +MEEA +EA L
Sbjct: 309 FSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEA------LD 362
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
++Y T+I+G + D A +L ++K G PNV Y +I L LKA K
Sbjct: 363 VISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGL-LKAGRIEDGLKNF 421
Query: 503 EDM 505
EDM
Sbjct: 422 EDM 424
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 124/275 (45%), Gaps = 4/275 (1%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A +VF + GCV + TY I+ S+ D A + + M+ G P + G I+
Sbjct: 452 ACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVH 511
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
FCK EA V RE+ P + L+S + + A +L + +
Sbjct: 512 GFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEE-AYQVLTEMTARGCA 570
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+ ++S+I L V A+ + MI +G P + ++I +SK G++ A E+
Sbjct: 571 PDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEI 630
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
L+LM G+ PD + Y LM GY ++++A + + + + + VT++ L+ G K
Sbjct: 631 LELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFK 690
Query: 456 LEEFDCALKLLNEM--KDVGVQPNVDEYNKLIQSL 488
+ D A L EM KD V P + Y LI L
Sbjct: 691 DGKTDRAFSLFKEMLEKD-EVPPTLVSYTILIDGL 724
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 124/293 (42%), Gaps = 4/293 (1%)
Query: 195 LTVEILNELIAL--FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAW 252
L +++N I L K K A E+F + GC +Y I L+ D A+
Sbjct: 16 LMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAY 75
Query: 253 SVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSL 312
MI+ G PD +I FCK G+ + H++ A K+ P + +I
Sbjct: 76 KFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQAL-KRFRPDVFLYTSVIHGY 134
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
C+ + + +L++ + +I LC++ V A L +M G
Sbjct: 135 CKAGD-LDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGD 193
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
F ++I A S G + A E+ + M RG +P + L+ G+++EA EI
Sbjct: 194 YVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQ 253
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
S V Y++L+ GYCKL D LKLL +M + P++ YN L+
Sbjct: 254 TVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILV 306
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 148/354 (41%), Gaps = 43/354 (12%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
++K + S E L++ +K G V +++ L+ K G+ + + F
Sbjct: 369 VIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLL----KAGRIEDGLKNFEDM 424
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
CV + TY I+ L + ++ A V E+M++ G +PD+ +I F K K
Sbjct: 425 SGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKM 484
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
EA + + K P + V + S
Sbjct: 485 DEARKLLDVMLTKG--PEPTAVTY----------------------------------GS 508
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
++ C++ ++ AK ++++M G PG +F S++S Y G A ++L M +RG
Sbjct: 509 IVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARG 568
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
PDV YT L+ + G++ EA + + + +TY T+I+ + K+ + A
Sbjct: 569 CAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAG 628
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLC-LKALDWRTAEKLLEDMRLKGLHLNGIT 516
++L M GV P+ YN L+ L+ +D A + + M G+ N +T
Sbjct: 629 EILELMAKSGVGPDCFAYNSLMDGYVKLERVDQ--AFGVYDRMVASGIKPNAVT 680
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 114/287 (39%), Gaps = 2/287 (0%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
I L++ + G+ + A++V + GC + Y I+ L A V + M
Sbjct: 540 IFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSM 599
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
IE G PD+ G II F K G + A + L + + P L+ + E
Sbjct: 600 IEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKL-ER 658
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP-PPGNAVFN 377
V A + D K F+ ++ L + A +L +M+ + PP +
Sbjct: 659 VDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYT 718
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+I KAG ++ A + M RG+ P+ +TYT L+ A G++ EA +++ + K
Sbjct: 719 ILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKL 778
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
Y LI G D A + EM G PN Y L
Sbjct: 779 GVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVL 825
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 113/243 (46%), Gaps = 10/243 (4%)
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY----TLAREKKMYPPQSVVA 306
A ++M TG +PD +++ CK K +A ++ ++ E + +V++
Sbjct: 4 ALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVIS 63
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
L +S+ + DE K M+D+ + + F+++I C+ LL++ +
Sbjct: 64 GL-ASIDKMDEAYKFFNSMIDN----GCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALK 118
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
P ++ SVI Y KAGD+ ++L+ M + G PD Y L+ G+++E
Sbjct: 119 RFRPD-VFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDE 177
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A E+ +K+ VT+ TLI + D A +L EM + G +P ++ + LI
Sbjct: 178 AYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIF 237
Query: 487 SLC 489
+LC
Sbjct: 238 ALC 240
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 111/262 (42%), Gaps = 10/262 (3%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V + LI L G+ A VF+ + GC + TY I+ S+ + A + E
Sbjct: 573 VILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILE 632
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE- 315
M ++G PD ++ + K + +A VY + P L+ L ++
Sbjct: 633 LMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDG 692
Query: 316 --DETVKLALDML--DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
D L +ML D+ Y I +I L + V A + +MI G P
Sbjct: 693 KTDRAFSLFKEMLEKDEVPPTLVSYTI-----LIDGLGKAGRVSEAFSQFQEMIDRGIIP 747
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+ S+I + +KAG + A ++++ M G+ PDV Y+ L++G + ++ A ++
Sbjct: 748 ECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVF 807
Query: 432 NEAKKNHSRLSPVTYHTLIRGY 453
E K + VTY L RG+
Sbjct: 808 QEMMKRGCAPNEVTYKVLRRGF 829
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 2/149 (1%)
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
L +M + G P N V++ KA + A+E+ M S G +P + +Y ++SG A+
Sbjct: 8 LKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLAS 67
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
+M+EA + N N + + TLI G+CK + LLN+ +P+V
Sbjct: 68 IDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALK-RFRPDVFL 126
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
Y +I C KA D T K+LE+M G
Sbjct: 127 YTSVIHGYC-KAGDLDTGFKILEEMLAAG 154
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%)
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHT 448
M A++ LK M + GL PDV +++G ++++A E+ E + V+Y+T
Sbjct: 1 MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60
Query: 449 LIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+I G +++ D A K N M D G +P+V + LI C
Sbjct: 61 VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFC 101
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 98/237 (41%), Gaps = 7/237 (2%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I FSK+G +AA E+ G + Y ++ + + D A+ V ++M+ +G
Sbjct: 614 IIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASG 673
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSV-VAFLISSLCQEDETVKL 321
P++ ++ K GK A ++ EK PP V LI L + V
Sbjct: 674 IKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGR-VSE 732
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A + ++S+I SL + + AK L+ M+ G P ++++I+
Sbjct: 733 AFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALIT 792
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+ + A ++ + M RG P+ TY L G+ G+ + EA K H
Sbjct: 793 GLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDL-----EAVKQH 844
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 136/285 (47%), Gaps = 10/285 (3%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
T+ I R D A + +KM G D +I C+ G+ EA ++
Sbjct: 12 TFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEM 71
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
+ P + A L+ LC E + L ML + + + +++V+ CR +
Sbjct: 72 DQ----PDMHMYAALVKGLCNA-ERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERK 126
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
A+ +L +M +G P +VI+AY K G M+ A+ +L+LM+ RG KP+V+TY
Sbjct: 127 AKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNA 186
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
L+ G+ N G++ +A +LN+ + VTY+ LIRG C + A +LL M+ G
Sbjct: 187 LVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDG 246
Query: 474 VQPNVDEYNKLIQSLCLKALDWRT--AEKLLEDMRLKGLHLNGIT 516
+ + YN LI +LC D RT A L + + +G+ N +T
Sbjct: 247 LIADQYTYNALINALC---KDGRTDQACSLFDSLETRGIKPNAVT 288
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 112/233 (48%), Gaps = 1/233 (0%)
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M E G P + ++ + C+ KAKEA + EK + P +I++ C+E
Sbjct: 101 RMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEG 160
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
AL +L+ K + ++++++ C VH A TLL+KM + G P +
Sbjct: 161 RMSD-ALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTY 219
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N +I G + A +L+LM GL D YTY L++ G+ ++AC + + +
Sbjct: 220 NLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLET 279
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + VT+++LI G CK + D A K L +M G P+ Y+ I+ LC
Sbjct: 280 RGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLC 332
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 130/326 (39%), Gaps = 5/326 (1%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
A++ A C + + +++K G K V N L+ F GK A + NK
Sbjct: 151 AVINAYCKEGRMSDALRVLELMKLRGCKPN----VWTYNALVQGFCNEGKVHKAMTLLNK 206
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + TY I + A+ + M G + D +I+ CK G+
Sbjct: 207 MRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGR 266
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+A ++ + + P LI+ LC+ + +A L+ +S
Sbjct: 267 TDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKA-DIAWKFLEKMVSAGCTPDTYTYS 325
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
S I LC+MK + + +M+ + P + VI K + M S
Sbjct: 326 SFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSS 385
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G PDV TYT M Y G++ EA +L E KN + + Y+TL+ G+ + + D A
Sbjct: 386 GCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHA 445
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ +L +M V PN Y L++ L
Sbjct: 446 VSILKQMTSVASVPNQFTYFILLRHL 471
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 139/351 (39%), Gaps = 6/351 (1%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+K +C++ +E + +KE+G + + ++ + K K A E+ +
Sbjct: 81 ALVKGLCNAERGEEGLLMLRRMKELGWRP----STRAYAAVVDFRCRERKAKEAEEMLQE 136
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ G T I A + A V E M G P+ ++ FC GK
Sbjct: 137 MFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGK 196
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+A + R + P LI C D ++ A +L G+ ++
Sbjct: 197 VHKAMTLLNKMRACGVNPDAVTYNLLIRGQCI-DGHIESAFRLLRLMEGDGLIADQYTYN 255
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
++I +LC+ A +L + + G P FNS+I+ K+G A + L+ M S
Sbjct: 256 ALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSA 315
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G PD YTY+ + +E + E + + S V Y +I K +
Sbjct: 316 GCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLV 375
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
+ EM G P+V Y +++ C++ AE +L +M G+ ++
Sbjct: 376 ARTWGEMVSSGCNPDVVTYTTSMRAYCIEG-RLNEAENVLMEMSKNGVTVD 425
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 146/375 (38%), Gaps = 35/375 (9%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+AL++ C+ + L + ++ G V N LI G ++AF +
Sbjct: 185 NALVQGFCNEGKVHKAMTLLNKMRACGVNPDAV----TYNLLIRGQCIDGHIESAFRLLR 240
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G +A+Q TY I AL + D A S+ + + G P++ +I+ CK G
Sbjct: 241 LMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSG 300
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP- 340
KA A P + I LC+ +K + + L F GE + +KP
Sbjct: 301 KADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCK----MKGSQEGLS-FIGEMLQKDVKPS 355
Query: 341 ---FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
++ VI L + ++ +M+S G P + + + AY G + A +L
Sbjct: 356 TVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLM 415
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR------ 451
M G+ D Y LM G+A+ GQ + A IL + S + TY L+R
Sbjct: 416 EMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMR 475
Query: 452 -----------GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT--A 498
G K E L + MK PN Y+ +++ + D RT A
Sbjct: 476 LVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGF---SEDGRTEEA 532
Query: 499 EKLLEDMRLKGLHLN 513
L+ M+ + LN
Sbjct: 533 TSLVSLMKEDSISLN 547
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 5/147 (3%)
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
M+ G P FNS+I Y + + A ++ M RG DV +Y L+ G G+
Sbjct: 1 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
++EA E+ E + + Y L++G C E + L +L MK++G +P+ Y
Sbjct: 61 IDEAVELFGEMDQPDMHM----YAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116
Query: 484 LIQSLCLKALDWRTAEKLLEDMRLKGL 510
++ C + + AE++L++M KGL
Sbjct: 117 VVDFRC-RERKAKEAEEMLQEMFEKGL 142
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 118/306 (38%), Gaps = 18/306 (5%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI K G+ A +F+ G N T+ I L + D AW EKM+
Sbjct: 255 NALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVS 314
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD+ I CK ++E +K + P +I L +E
Sbjct: 315 AGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKE-RNYG 373
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
L + + +++ +R+ C ++ A+ +L +M G +N+++
Sbjct: 374 LVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLM 433
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM-----------------SGYANGGQ 423
++ G A+ +LK M S P+ +TY L+ +G +
Sbjct: 434 DGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIE 493
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
+ + + + KKN + TY +++ G+ + + A L++ MK+ + N D Y
Sbjct: 494 LTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTA 553
Query: 484 LIQSLC 489
L+ C
Sbjct: 554 LVTCFC 559
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 57/120 (47%), Gaps = 7/120 (5%)
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M G +PD YT+ L+ GY Q++ A ++ ++ V+Y TLI G C+
Sbjct: 1 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRA 518
D A++L EM QP++ Y L++ LC R E LL R+K L TRA
Sbjct: 61 IDEAVELFGEMD----QPDMHMYAALVKGLCNAE---RGEEGLLMLRRMKELGWRPSTRA 113
Score = 38.5 bits (88), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 44/245 (17%), Positives = 92/245 (37%), Gaps = 20/245 (8%)
Query: 189 EKEKGVLTVEIL--NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRK 246
E K +TV+ + N L+ + +G+ A + + V NQ TY+ + L R +
Sbjct: 416 EMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMR 475
Query: 247 IFD----------W-------AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVV 289
+ + W + + + M + LP+S I+ F + G+ +EA +
Sbjct: 476 LVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSL 535
Query: 290 YTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLC 349
+L +E + + + L++ C+ + A ++ + + ++ L
Sbjct: 536 VSLMKEDSISLNEDIYTALVTCFCKSKRYLD-AWVLVCSMIQHGFIPQLMSYQHLLSGLI 594
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
AK + + P V+ +I K G + EM+ ++ +P
Sbjct: 595 CEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQ 654
Query: 410 TYTGL 414
TY L
Sbjct: 655 TYAML 659
>gi|255546465|ref|XP_002514292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546748|gb|EEF48246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 608
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 161/354 (45%), Gaps = 15/354 (4%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+A++ A S KE ++ +K+ G K T N LI + GK + ++ +
Sbjct: 132 NAMINAFSESGNVKEAMKIFQKMKDTGCKP----TTSTFNTLIKGYGNAGKPEEGLKMLH 187
Query: 222 KFGDYGCV-ANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
G V N TY + A +K + AW+V KM+ +G PD + + +
Sbjct: 188 LMSLDGSVKPNDRTYNILVRAWCSKKNIEEAWNVLHKMVASGIQPDVVTYNILARAYAQK 247
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
G+ A + + +K+ P + +++ C+E ++ AL F ++ + P
Sbjct: 248 GETLRAEDLILEMQYEKVAPNERTCGIIVNGYCKEGNMIE-ALR----FVYRMKELGVHP 302
Query: 341 ----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
F+S+I+ + D G L+ M G P F+++++A+S AG M E+
Sbjct: 303 NLVIFNSLIKGFLDITDTDGVDEALTLMEEYGVKPDVITFSTIMNAWSSAGLMDKCQEIF 362
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
M G++PD++ ++ L GY G+ E A +L K+ R + V T+I G+C
Sbjct: 363 NDMAKAGIEPDIHAFSILAKGYVRAGETENAESVLTSMAKSGVRPNVVICTTIISGWCSA 422
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+ + A + +M ++G+ PN+ + LI +A AE+LL+ M KG+
Sbjct: 423 GKMENAKMVYEKMCEIGISPNLKTFETLIWGYA-EARQPGKAEELLQLMEEKGV 475
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 110/197 (55%), Gaps = 2/197 (1%)
Query: 325 MLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
+ D+ + + + +++++ +L ++K L+SK+ G P + ++N++I+A+S
Sbjct: 80 IFDNLVEDGHRPTLITYTTLVAALTKLKHFESIFLLISKVEENGMKPDSILYNAMINAFS 139
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS-RLSP 443
++G++ AM++ + M+ G KP T+ L+ GY N G+ EE ++L+ + S + +
Sbjct: 140 ESGNVKEAMKIFQKMKDTGCKPTTSTFNTLIKGYGNAGKPEEGLKMLHLMSLDGSVKPND 199
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
TY+ L+R +C + + A +L++M G+QP+V YN L ++ K R AE L+
Sbjct: 200 RTYNILVRAWCSKKNIEEAWNVLHKMVASGIQPDVVTYNILARAYAQKGETLR-AEDLIL 258
Query: 504 DMRLKGLHLNGITRALI 520
+M+ + + N T +I
Sbjct: 259 EMQYEKVAPNERTCGII 275
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 140/296 (47%), Gaps = 8/296 (2%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
TV +L+ + GK A +F+ + G TY + AL++ K F+ + +
Sbjct: 57 TVHSRTKLMNILIGKGKPHEANLIFDNLVEDGHRPTLITYTTLVAALTKLKHFESIFLLI 116
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
K+ E G PDS +I+ F + G KEA ++ ++ P S LI
Sbjct: 117 SKVEENGMKPDSILYNAMINAFSESGNVKEAMKIFQKMKDTGCKPTTSTFNTLIKGYGNA 176
Query: 316 DETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
+ + L ML S + ++KP ++ ++R+ C K++ A +L KM++ G P
Sbjct: 177 GKPEE-GLKMLHLMSLDG---SVKPNDRTYNILVRAWCSKKNIEEAWNVLHKMVASGIQP 232
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+N + AY++ G+ A +++ M+ + P+ T +++GY G M EA +
Sbjct: 233 DVVTYNILARAYAQKGETLRAEDLILEMQYEKVAPNERTCGIIVNGYCKEGNMIEALRFV 292
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
K+ + V +++LI+G+ + + D + L M++ GV+P+V ++ ++ +
Sbjct: 293 YRMKELGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEYGVKPDVITFSTIMNA 348
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 81/163 (49%), Gaps = 2/163 (1%)
Query: 355 HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
H A + ++ +G P + ++++A +K ++ + G+KPD Y +
Sbjct: 75 HEANLIFDNLVEDGHRPTLITYTTLVAALTKLKHFESIFLLISKVEENGMKPDSILYNAM 134
Query: 415 MSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK-DVG 473
++ ++ G ++EA +I + K + + T++TLI+GY + + LK+L+ M D
Sbjct: 135 INAFSESGNVKEAMKIFQKMKDTGCKPTTSTFNTLIKGYGNAGKPEEGLKMLHLMSLDGS 194
Query: 474 VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
V+PN YN L+++ C K + A +L M G+ + +T
Sbjct: 195 VKPNDRTYNILVRAWCSKK-NIEEAWNVLHKMVASGIQPDVVT 236
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 143/308 (46%), Gaps = 22/308 (7%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSV-- 254
+ N +I+ ++G+ + A +V +G + TY I+ ++ + V
Sbjct: 191 IYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDM 250
Query: 255 -CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISS 311
++M+E G P + G +I+ +CK A V+ +++ + SVV + LIS
Sbjct: 251 LLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGI--AASVVTYNSLISG 308
Query: 312 LCQE---DETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKM 364
LC E +E VKL +M D + P F V++ C+ + A + M
Sbjct: 309 LCSEGKVEEGVKLMEEMED--------LGLSPNEITFGCVLKGFCKKGMMADANDWIDGM 360
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
P ++N +I Y + G M AM + + M +G+ P+V TY L++G++ G
Sbjct: 361 TERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDW 420
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
A +L+E K+ VTY+ LI C E A+KLL+EM +VG++PN YN +
Sbjct: 421 RSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTI 480
Query: 485 IQSLCLKA 492
IQ C K
Sbjct: 481 IQGFCDKG 488
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 146/328 (44%), Gaps = 4/328 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGV-LTVEILNELIALFSKLGKGKAAFEVF 220
++L+ C G +Y + ++KE+ E G+ T LI + K AA VF
Sbjct: 230 NSLIDGYCKKGGAGNMYHVDMLLKEM--VEAGISPTAVTFGVLINGYCKNSNTAAAVRVF 287
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ G A+ TY I L + + E+M + G P+ G ++ FCK
Sbjct: 288 EEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKK 347
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
G +A+ E+ + P + LI + + ++ A+ + + + + +
Sbjct: 348 GMMADANDWIDGMTERNVEPDVVIYNILID-VYRRLGKMEDAMAVKEAMAKKGISPNVTT 406
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++ +I R D A LL +M +G +N +I A G++ A+++L M
Sbjct: 407 YNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMS 466
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
GL+P+ TY ++ G+ + G ++ A EI +K R + VTY+ I+ +C++ + D
Sbjct: 467 EVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMD 526
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSL 488
A LLNEM D + PN Y + + +
Sbjct: 527 EANDLLNEMLDKCLVPNGITYETIKEGM 554
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 118/257 (45%), Gaps = 9/257 (3%)
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL-AL 323
PD +IS C+ G+ ++A V + + P + LI C++ + +
Sbjct: 189 PDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHV 248
Query: 324 DMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
DML EA I P F +I C+ + A + +M +G +NS+
Sbjct: 249 DMLLKEMVEA---GISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSL 305
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
IS G + +++++ M GL P+ T+ ++ G+ G M +A + ++ + +
Sbjct: 306 ISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNV 365
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
V Y+ LI Y +L + + A+ + M G+ PNV YN LI ++ DWR+A
Sbjct: 366 EPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFS-RSGDWRSAS 424
Query: 500 KLLEDMRLKGLHLNGIT 516
LL++M+ KG+ + +T
Sbjct: 425 GLLDEMKEKGIEADVVT 441
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 13/176 (7%)
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P + N++++ A + A + + R + PD+YT+ ++SG GQ+ +A ++
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCK------LEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
+ K S TY++LI GYCK + D LL EM + G+ P + L
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVD---MLLKEMVEAGISPTAVTFGVL 270
Query: 485 IQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAVKELEEDAIENGEALVE 539
I C K + A ++ E+M+ +G+ + +T +LI + E +E G L+E
Sbjct: 271 INGYC-KNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGL--CSEGKVEEGVKLME 323
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCA 462
+P + L++G +++ A + A + R+SP T++T+I G C++ + A
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRR--RVSPDIYTFNTVISGLCRIGQLRKA 210
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLK--ALDWRTAEKLLEDMRLKGLHLNGIT 516
+ ++K G+ P+V YN LI C K A + + LL++M G+ +T
Sbjct: 211 GDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVT 266
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 190/415 (45%), Gaps = 22/415 (5%)
Query: 103 KLENVLSLLQSSVDGYLESSLDSFELD-LHEDFVLKVLETPLVLGENLVCFFKWVTSGVV 161
++EN+L +L++ + +++ + L+ L ED LK++E + K V G+V
Sbjct: 105 EIENLLKILENELGFKPDTNFYNIALNALVEDNKLKLVE---------MLHSKMVNEGIV 155
Query: 162 ------DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKA 215
+ L+KA+C + + + + + G K + L+ F + G
Sbjct: 156 LDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEI----TFTTLMQGFIEEGDLNG 211
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A ++ + YGC+ + + + + A ++ E G PD +++
Sbjct: 212 ALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVN 271
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
FC+ G +A + EK P LIS +C+ E K A+++L
Sbjct: 272 GFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEK-AIEILQQMILRECS 330
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
++++I +LC+ ++ A L ++S+G P FN++I + + AMEM
Sbjct: 331 PNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEM 390
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
+ M+++G KPD +TY+ L+ +++EA +L E + + + V Y+TLI G CK
Sbjct: 391 FEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCK 450
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+ A ++ ++M+ +GV + YN LI LC K A +L++ M ++GL
Sbjct: 451 SRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLC-KNKRVEEASQLMDQMIMEGL 504
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 148/324 (45%), Gaps = 10/324 (3%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI+ KLG+ + A E+ + C N TY I AL + + A + ++
Sbjct: 302 NSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVS 361
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G LPD +I C A ++ + K P + + LI SLC E +K
Sbjct: 362 KGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYE-RRLK 420
Query: 321 LALDMLDDF--SGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
AL +L + SG AR + ++++I LC+ + + A+ + +M G + +N+
Sbjct: 421 EALMLLKEMESSGCARNAVV--YNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNT 478
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I K + A +++ M GLKPD +TY L++ + G +E+A +I+ N
Sbjct: 479 LIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNG 538
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
TY TLI G C+ D A KLL ++ G+ YN +IQ+L ++ RT
Sbjct: 539 CEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRK---RTK 595
Query: 499 E--KLLEDMRLKGLHLNGITRALI 520
E +L +M K + +T ++
Sbjct: 596 EGMRLFREMMEKSDPPDALTHKIV 619
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 126/286 (44%), Gaps = 2/286 (0%)
Query: 235 YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR 294
Y + AL + KM+ G + D +I CK + + A ++
Sbjct: 126 YNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMA 185
Query: 295 EKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDV 354
+ P + L+ +E + + AL M G ++ C+ V
Sbjct: 186 NHGLKPDEITFTTLMQGFIEEGD-LNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRV 244
Query: 355 HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
A + ++ EG P FNS+++ + + G++ A++++ M +G PDVYTY L
Sbjct: 245 EEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSL 304
Query: 415 MSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV 474
+SG G+ E+A EIL + + VTY+TLI CK E + A L + G+
Sbjct: 305 ISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGL 364
Query: 475 QPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
P+V +N LIQ LCL + A ++ E+M+ KG + T +++
Sbjct: 365 LPDVCTFNTLIQGLCLSK-NQDIAMEMFEEMKNKGCKPDEFTYSIL 409
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 131/321 (40%), Gaps = 13/321 (4%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
L+ ++C KE L ++ G V + N LI K + + A E+F++
Sbjct: 409 LIDSLCYERRLKEALMLLKEMESSGCARNAV----VYNTLIDGLCKSRRIEDAEEIFDQM 464
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
G + TY I+ L + K + A + ++MI G PD ++++FC+ G
Sbjct: 465 ELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDI 524
Query: 284 KEA-HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
++A +V T+A P LI LC+ V +A +L + ++
Sbjct: 525 EKAGDIVQTMA-SNGCEPDIFTYGTLIGGLCRAGR-VDVASKLLRSVQMKGIVLTPHAYN 582
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSK-AGDMTPAMEMLKLMRS 401
VI++L K L +M+ + PP V G + A++ M
Sbjct: 583 PVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLE 642
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
+G+ P+ ++ L G + + E++N + T ++IRG+ K+ +F+
Sbjct: 643 KGILPEFPSFGFLAEGLCSLSMEDTLIELINMVMEKAQMSERET--SMIRGFLKIRKFND 700
Query: 462 ALKLLNEMKDVGVQPNVDEYN 482
AL L + D + N YN
Sbjct: 701 ALANLGGILD---RQNPKRYN 718
>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
Length = 599
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 141/314 (44%), Gaps = 2/314 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
++ LF+K G A ++ + +G N+ Y ++ +R F A+ V E M+ G
Sbjct: 198 IVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAG 257
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD ++ FCK G+ +A V ++ P ++ + ++ A
Sbjct: 258 LKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGG-NIQKA 316
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
L++ D + + ++S++ L + + + A+ +L++M++ G P + ++
Sbjct: 317 LEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTALTEG 376
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y++AGD+ A M + M+ L D+ Y L+ G M+ A E+ + + +
Sbjct: 377 YARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAGLKHN 436
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
+TY T++ G+ + E A LLN+M+ G + Y I++ C ++ D + L
Sbjct: 437 RITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICYTSFIKA-CFRSGDTEEVTETL 495
Query: 503 EDMRLKGLHLNGIT 516
MR K L +N T
Sbjct: 496 AVMREKKLEVNART 509
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 142/344 (41%), Gaps = 39/344 (11%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
L+ +++ G AA F N Y I A + + + A + E+M+ G
Sbjct: 23 LVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQG 82
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED--ETVK 320
+ IIS + G + A + + + + P V ++ + CQ ETV+
Sbjct: 83 IQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVE 142
Query: 321 LALDMLDD--FSGEARKY--------------------------AIKP----FSSVIRSL 348
L +++ F G Y + P + +++
Sbjct: 143 ALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLF 202
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
+ ++ A +L +M G P ++ ++ Y++ GD T A ++ + M S GLKPD+
Sbjct: 203 TKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDI 262
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV--TYHTLIRGYCKLEEFDCALKLL 466
Y L+ + G+M++A +L + N RL P TY +++ GY K AL++
Sbjct: 263 VIYNILVHAFCKAGRMDKALGVLENIEAN--RLLPTIETYTSILDGYVKGGNIQKALEVF 320
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+ +K G++P V YN L+ L KA A +L +M G+
Sbjct: 321 DRIKTAGLRPGVVSYNSLLSGLA-KARQMENARLMLNEMLANGV 363
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 149/333 (44%), Gaps = 11/333 (3%)
Query: 195 LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSV 254
L + +I+ ++ G +AA F KF V Y ++A + + ++
Sbjct: 85 LNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEAL 144
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
+M E G + +++ F + ++ + + + P + ++ +
Sbjct: 145 LAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTK 204
Query: 315 EDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
K ALD+L+ E K+ + P ++ ++ R D A + M+S G
Sbjct: 205 AGNMAK-ALDILE----EMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLK 259
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P ++N ++ A+ KAG M A+ +L+ + + L P + TYT ++ GY GG +++A E+
Sbjct: 260 PDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEV 319
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
+ K R V+Y++L+ G K + + A +LNEM GV PN Y L +
Sbjct: 320 FDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTALTEGYA- 378
Query: 491 KALDWRTAEKLLEDMRLKGLHLNGITR-ALIRA 522
+A D A + + M+ + L ++ + AL++A
Sbjct: 379 RAGDVEKAFGMFQRMKKENLAIDIVAYGALLKA 411
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 91/191 (47%), Gaps = 5/191 (2%)
Query: 334 RKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
R IKP ++S+I + +D+ GA +M+S+G AVF S+IS Y+ AG+
Sbjct: 44 RASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNN 103
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
A + ++ L P Y ++ Y G ME +L + ++ + + Y T+
Sbjct: 104 EAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTV 163
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
+ G+ ++ + + L + +K G+ P Y +++ L KA + A +LE+M G
Sbjct: 164 LNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVK-LFTKAGNMAKALDILEEMDKHG 222
Query: 510 LHLNGITRALI 520
+ N + A+I
Sbjct: 223 VSPNKMIYAMI 233
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 73/154 (47%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
K ++ + ++ R D A+ M + P ++ S+I AY++A DM A+
Sbjct: 14 KPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVA 73
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+ M S+G++ + + ++SGYA+ G E A + K + + Y+++++ YC
Sbjct: 74 CTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYC 133
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ + LL +M++ G Q N+ Y ++
Sbjct: 134 QAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGF 167
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 142/312 (45%), Gaps = 18/312 (5%)
Query: 211 GKGKAAFEVFNKFGDYG--CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSE 268
GK A ++ + G C N Y I+ + + A + ++M++ G PD
Sbjct: 199 GKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLV 258
Query: 269 KVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI---SSLCQEDETVKLALDM 325
++ CK +A K++ P LI SS Q E V++ +M
Sbjct: 259 TYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 318
Query: 326 LDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
R+++I P S ++ SLC+ + A+ + M +G P +N +++
Sbjct: 319 --------RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLN 370
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
Y+ G + ++ LM G+ PD YT+ L+ YAN G +++A I NE + + +
Sbjct: 371 GYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 430
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
VTY T+I C++ + D A++ N+M D GV P+ YN LIQ C A++L
Sbjct: 431 DVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHG-SLLKAKEL 489
Query: 502 LEDMRLKGLHLN 513
+ ++ G+HL+
Sbjct: 490 ISEIMNNGMHLD 501
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 152/364 (41%), Gaps = 42/364 (11%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEIL--NELIALFSKLGKGKAAFEVFN 221
LLK++C + L ++ E G V + ++ N +I F K G A ++F
Sbjct: 191 LLKSLCDQGKSGQADDLLRMMAEGG----AVCSPNVVAYNTVIDGFFKEGDVNKACDLFK 246
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ G + TY + AL + + D A + +M+ LP++ +I + G
Sbjct: 247 EMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTG 306
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK------ 335
+ KEA V+ R + P ++ L+ SLC+ + +K A D+ D + + +
Sbjct: 307 QWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGK-IKEARDVFDTMAMKGQNPDVFSY 365
Query: 336 ------YAIK-----------------------PFSSVIRSLCRMKDVHGAKTLLSKMIS 366
YA K F+ +I++ + A + ++M
Sbjct: 366 NIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRD 425
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
G P + +VI+A + G M AME M +G+ PD Y Y L+ G+ G + +
Sbjct: 426 HGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLK 485
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A E+++E N L V + ++I CKL A + + +VG+ P+ YN L+
Sbjct: 486 AKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMD 545
Query: 487 SLCL 490
CL
Sbjct: 546 GYCL 549
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 133/296 (44%), Gaps = 9/296 (3%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V L+ L+ K GK K A +VF+ G + +Y + + + + +
Sbjct: 327 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 386
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ-- 314
M+ G PD +I + G +A +++ R+ + P +I++LC+
Sbjct: 387 LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 446
Query: 315 -EDETVKLALDMLDDFSGEA-RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
D+ ++ M+D G A KYA ++ +I+ C + AK L+S++++ G
Sbjct: 447 KMDDAMEKFNQMID--QGVAPDKYA---YNCLIQGFCTHGSLLKAKELISEIMNNGMHLD 501
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
F+S+I+ K G + A + L + GL PD Y LM GY G+ME+A + +
Sbjct: 502 IVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFD 561
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ V Y TL+ GYCK+ D L L EM G++P+ Y+ +I L
Sbjct: 562 AMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGL 617
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 133/294 (45%), Gaps = 3/294 (1%)
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
GD G + T+ I+A + + D A + +M + G PD +I+ C+ GK
Sbjct: 389 LGD-GIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGK 447
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+A + ++ + P + LI C +K A +++ + I FS
Sbjct: 448 MDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLK-AKELISEIMNNGMHLDIVFFS 506
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
S+I +LC++ V A+ + ++ G P V+N ++ Y G M A+ + M S
Sbjct: 507 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSA 566
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G++P+V Y L++GY G+++E + E + + S + Y +I G + A
Sbjct: 567 GIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPA 626
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+EM + G+ ++ YN +++ L K + A L +++R + +N IT
Sbjct: 627 KMKFHEMTESGIAMDICTYNIVLRGL-FKNRCFDEAIFLFKELRAMNVKINIIT 679
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 124/289 (42%), Gaps = 1/289 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N LI ++ G A +FN+ D+G + TY I AL R D A +MI
Sbjct: 400 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 459
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G PD +I FC G +A + + M+ + +I++LC+ +
Sbjct: 460 DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVM 519
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
A ++ D ++ ++ C + + A + M+S G P + ++
Sbjct: 520 D-AQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTL 578
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
++ Y K G + + + + M RG+KP Y+ ++ G G+ A +E ++
Sbjct: 579 VNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGI 638
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ TY+ ++RG K FD A+ L E++ + V+ N+ N +I +
Sbjct: 639 AMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGM 687
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 116/267 (43%), Gaps = 38/267 (14%)
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDE 317
E G +PD ++ C GK+ +A + + E +VVA+ +I +E +
Sbjct: 178 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGD 237
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
K A D+ + + ++SV+ +LC+ + + A+ L +M+++ P N +N
Sbjct: 238 VNK-ACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYN 296
Query: 378 SVISAYSKAGDMTPAMEMLKLMRS-----------------------------------R 402
++I YS G A+ + K MR +
Sbjct: 297 NLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMK 356
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G PDV++Y +++GYA G + + ++ + + T++ LI+ Y D A
Sbjct: 357 GQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKA 416
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + NEM+D GV+P+V Y +I +LC
Sbjct: 417 MIIFNEMRDHGVKPDVVTYRTVIAALC 443
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 136/324 (41%), Gaps = 4/324 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+IA ++GK A E FN+ D G ++ Y I+ A + +++ G
Sbjct: 438 VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNG 497
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
D II+ CK G+ +A ++ L ++P V L+ C + K A
Sbjct: 498 MHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEK-A 556
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
L + D + + + +++ C++ + +L +M+ G P +++ +I
Sbjct: 557 LRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDG 616
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+AG PA M G+ D+ TY ++ G +EA + E + + +++
Sbjct: 617 LFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKIN 676
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
+T +T+I G + + A L + + P+V Y+ +I +L + L AE +
Sbjct: 677 IITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGL-VEEAEDMF 735
Query: 503 EDMRLKGLHLNGITRALIRAVKEL 526
M+ G N +R L V+EL
Sbjct: 736 SSMQNAGCEPN--SRLLNHVVREL 757
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR--GLKPDVYTYTGL 414
A +++ G + N ++ + +A A+++L L R+ G PDV++Y+ L
Sbjct: 133 ALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDIL-LHRTPELGCVPDVFSYSIL 191
Query: 415 MSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
+ + G+ +A ++L + + SP V Y+T+I G+ K + + A L EM
Sbjct: 192 LKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQR 251
Query: 473 GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
G+ P++ YN ++ +LC KA AE L M
Sbjct: 252 GIPPDLVTYNSVVHALC-KARAMDKAEAFLRQM 283
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 13/146 (8%)
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT-----PAMEMLKLMRS-------RGL 404
A LL ++ G P N ++A ++A PA+ + R+ R L
Sbjct: 51 AHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQGPRVL 110
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
P +TY LM + E A + + R++ + + L+ G+C+ + D AL
Sbjct: 111 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALD 170
Query: 465 -LLNEMKDVGVQPNVDEYNKLIQSLC 489
LL+ ++G P+V Y+ L++SLC
Sbjct: 171 ILLHRTPELGCVPDVFSYSILLKSLC 196
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 156/342 (45%), Gaps = 6/342 (1%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
LL+A C G K+ L D +++ G V ++N + + G+ A E
Sbjct: 73 LLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGI----CQEGRVDDAIEFLKNL 128
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
YGC N +Y ++ L + ++ A + +M + G P+ +IS+ C+ G
Sbjct: 129 PSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLV 188
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
+ A V + P L+ + C++ + K A+ LD I +++
Sbjct: 189 EPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDK-AMAFLDLMVSRGCYPDIVSYNT 247
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
++ +LCR +V A LL ++ +G P +N+VI +KAG A+E+L M S+G
Sbjct: 248 LLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKG 307
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
L+PD+ TY+ + +G ++E+A + + R + V Y+ +I G CK E A+
Sbjct: 308 LQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAI 367
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
L M G PN Y LI+ L + L + A LL+++
Sbjct: 368 DLFAYMIGNGCMPNESTYTILIEGLAYEGL-IKEARDLLDEL 408
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 152/329 (46%), Gaps = 46/329 (13%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI G+ A V ++ CV + TY +EA +R + A + ++M +
Sbjct: 36 NTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRD 95
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEA---------------HVVYTLARE---------- 295
G PD +++ C+ G+ +A V Y + +
Sbjct: 96 KGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWED 155
Query: 296 ---------KKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKP---- 340
+K PP +VV F LIS LC++ V+ AL++L+ KY P
Sbjct: 156 AEELMGEMGQKGCPP-NVVTFNMLISFLCRKG-LVEPALEVLEQIP----KYGCTPNSLS 209
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++ ++ + C+ K + A L M+S G P +N++++A ++G++ A+E+L ++
Sbjct: 210 YNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK 269
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+G P + +Y ++ G G+ +EA E+LNE + +TY T+ G C+ + +
Sbjct: 270 DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIE 329
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A++ +++D+G++PN YN +I LC
Sbjct: 330 DAIRAFGKVQDMGIRPNTVLYNAIILGLC 358
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 142/300 (47%), Gaps = 3/300 (1%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
TY I L R A +V ++M+ +PD ++ CK K+A +
Sbjct: 34 TYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM 93
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
R+K P +++ +CQE V A++ L + + ++ V++ LC +
Sbjct: 94 RDKGCTPDIVTYNVVVNGICQEGR-VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAER 152
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
A+ L+ +M +G PP FN +IS + G + PA+E+L+ + G P+ +Y
Sbjct: 153 WEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNP 212
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
L+ + +M++A L+ V+Y+TL+ C+ E D A++LL+++KD G
Sbjct: 213 LLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 272
Query: 474 VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIEN 533
P + YN +I L KA + A +LL +M KGL + IT + I A ED IE+
Sbjct: 273 CAPVLISYNTVIDGL-TKAGKTKEALELLNEMVSKGLQPDIITYSTI-AAGLCREDRIED 330
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 98/217 (45%), Gaps = 4/217 (1%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
+++ +C G+ A L E + P LI LC T AL +LD+
Sbjct: 6 MVAGYCGAGQLDAAR---RLVAEMPVEPDAYTYNTLIRGLCGRGRTAN-ALAVLDEMLRR 61
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
+ ++ ++ + C+ A LL +M +G P +N V++ + G + A
Sbjct: 62 RCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDA 121
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
+E LK + S G +P+ +Y ++ G + E+A E++ E + + VT++ LI
Sbjct: 122 IEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISF 181
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
C+ + AL++L ++ G PN YN L+ + C
Sbjct: 182 LCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFC 218
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 105/262 (40%), Gaps = 49/262 (18%)
Query: 182 DIVKEIGEK--EKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI 239
+++ E+G+K V+T N LI+ + G + A EV + YGC N +Y +
Sbjct: 158 ELMGEMGQKGCPPNVVT---FNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLL 214
Query: 240 EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC--------------------- 278
A ++K D A + + M+ G PD +++ C
Sbjct: 215 HAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCA 274
Query: 279 --------------KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALD 324
K GK KEA + K + P + + + LC+ED D
Sbjct: 275 PVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIE----D 330
Query: 325 MLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
+ F G+ + I+P ++++I LC+ ++ H A L + MI G P + + +I
Sbjct: 331 AIRAF-GKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 389
Query: 381 SAYSKAGDMTPAMEMLKLMRSR 402
+ G + A ++L + SR
Sbjct: 390 EGLAYEGLIKEARDLLDELCSR 411
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
Y +++GY GQ++ A ++ E TY+TLIRG C AL +L+EM
Sbjct: 3 YNAMVAGYCGAGQLDAARRLVAEMPVEPDA---YTYNTLIRGLCGRGRTANALAVLDEML 59
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
P+V Y L+++ C ++ ++ A KLL++MR KG + +T ++
Sbjct: 60 RRRCVPDVVTYTILLEATCKRS-GYKQAMKLLDEMRDKGCTPDIVTYNVV 108
>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
Length = 653
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 154/329 (46%), Gaps = 12/329 (3%)
Query: 198 EILNELI-ALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+ N LI AL + G A N D G N TY + AL + A + +
Sbjct: 135 RLYNHLIDALLRENMVGAVALVCGNMRKD-GVQPNVFTYNLLVRALCQNHRVGAARKMLD 193
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSV-VAFLISSLCQE 315
+M G PD G I+S C G+ EA V + A PP + +I +LC+E
Sbjct: 194 EMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAA------PPVAASYNAVILALCRE 247
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
++ ++ D G + + +++++ + C+ ++ A +L++M+ G P A
Sbjct: 248 FR-MQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVAT 306
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
F +++ G + A++M K M + G P +Y L+ G + G ++ A +LN+ +
Sbjct: 307 FTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDME 366
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
++ + TY TLI G+ K + D A+ + N+M G +PNV Y ++ C K L +
Sbjct: 367 QHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFC-KKLMF 425
Query: 496 RTAEKLLEDMRLKGLHLNGIT-RALIRAV 523
AE L++ M ++ N +T LIR++
Sbjct: 426 NQAESLIDKMLVENCPPNTVTFNTLIRSL 454
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 131/283 (46%), Gaps = 2/283 (0%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
+Y I AL R ++V M+ G P+ I++ FCK G+ + A +
Sbjct: 236 SYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARM 295
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
P + L+ L D V ALDM E + ++ +IR LC + D
Sbjct: 296 VITGCTPNVATFTALVGGL-FNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGD 354
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
+ GA ++L+ M G P ++++I +SKAGD+ A+ + M G KP+V YT
Sbjct: 355 LKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTN 414
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
++ + +A ++++ + + VT++TLIR C AL + +EM+ G
Sbjct: 415 MVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHG 474
Query: 474 VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
PN YN+L+ L + + A +++ +M+ G+ L+ +T
Sbjct: 475 CPPNGRTYNELLHGL-FREGNCGDALQMVIEMQNHGIELSLVT 516
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 150/346 (43%), Gaps = 6/346 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+A++ A+C +EV+A+ + G + + I+N F K G+ + A +
Sbjct: 238 NAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNA----FCKAGELRMACAILA 293
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ GC N T+ + L A + + M+ G P + +I C G
Sbjct: 294 RMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVG 353
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
K A V + +P + LI + + + A+ + +D + K + +
Sbjct: 354 DLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGD-LDGAISIWNDMTRSGCKPNVVVY 412
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
++++ C+ + A++L+ KM+ E PP FN++I + + A+ + MR
Sbjct: 413 TNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRR 472
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G P+ TY L+ G G +A +++ E + + LS VTY+T++ G C++
Sbjct: 473 HGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGRE 532
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRL 507
A+ + M G+QP+ + +I + C K + R A +L M +
Sbjct: 533 AMFFVGRMIVRGIQPDAFTFTAIIHAYC-KEGEVRMAAWILGAMNV 577
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 121/292 (41%), Gaps = 9/292 (3%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI +G K A V N +GC N TY I+ S+ D A S+ M
Sbjct: 343 NVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTR 402
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
+G P+ ++ FCK +A + + P LI SLC V
Sbjct: 403 SGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNC-RRVG 461
Query: 321 LALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
AL + E R++ P ++ ++ L R + A ++ +M + G +
Sbjct: 462 RALGVFH----EMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTY 517
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N+V+S + AM + M RG++PD +T+T ++ Y G++ A IL
Sbjct: 518 NTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNV 577
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ + + Y L+ C ++ + A+ L +M G+ PN +N L++ +
Sbjct: 578 VNCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEGIYPNTVTWNVLVRGV 629
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 10/185 (5%)
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
G AR A + ++ +I +L R V + M +G P +N ++ A + +
Sbjct: 127 GCARPTAPRLYNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVG 186
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV--TYHT 448
A +ML M ++G PD TY ++S G+++EA E+L+ A PV +Y+
Sbjct: 187 AARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAAP-------PVAASYNA 239
Query: 449 LIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLK 508
+I C+ ++ +M G+QPNV Y ++ + C KA + R A +L M +
Sbjct: 240 VILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFC-KAGELRMACAILARMVIT 298
Query: 509 GLHLN 513
G N
Sbjct: 299 GCTPN 303
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 66/158 (41%), Gaps = 7/158 (4%)
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
A + + +R L DV G + L +M G P + + A+++AG A++
Sbjct: 60 AARAHEAAVRRLAAAGDVDGVQLELQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTF 119
Query: 397 -----KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
L +R P +Y + L+ + + +K+ + + TY+ L+R
Sbjct: 120 YRAVHDLGCARPTAPRLYNH--LIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVR 177
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
C+ A K+L+EM G P+ Y ++ +LC
Sbjct: 178 ALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALC 215
>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 472
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 146/326 (44%), Gaps = 36/326 (11%)
Query: 191 EKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDW 250
E V++ +IL + + ++ + + VF+K D+ C +Q+ Y + L +
Sbjct: 80 ENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNL 139
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A+ + M E G LP P + + LI
Sbjct: 140 AFKFYKNMREIG-LP----------------------------------PTVASLNVLIK 164
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
+LC+ D TV L + + + ++I LCR + AK L ++M+ +
Sbjct: 165 ALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCA 224
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P + S+I+ + ++ AM L+ M+S+G++P+V+TY+ LM G G+ +A E+
Sbjct: 225 PTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMEL 284
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
R + VTY TLI G CK ++ A++LL+ M G++P+ Y K+I C
Sbjct: 285 FEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCA 344
Query: 491 KALDWRTAEKLLEDMRLKGLHLNGIT 516
+ +R A L++M L G+ N +T
Sbjct: 345 IS-KFREAANFLDEMILGGITPNRLT 369
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 137/340 (40%), Gaps = 22/340 (6%)
Query: 178 YALWDIVKEIGEKEKGVLTVEILNELI-ALFSKLGKGKAAFEVFNKFGDYGCVANQETYY 236
+ + ++EIG TV LN LI AL G A ++F + GC + TY
Sbjct: 141 FKFYKNMREIGLPP----TVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYG 196
Query: 237 FTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREK 296
I L R D A + +M+E P +I+ C EA + K
Sbjct: 197 TLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSK 256
Query: 297 KMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHG 356
+ P + L+ LC++ +++ A+++ + + + ++++I LC+ + +
Sbjct: 257 GIEPNVFTYSSLMDGLCKDGRSLQ-AMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQE 315
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT---- 412
A LL +M +G P ++ VIS + A L M G+ P+ T+
Sbjct: 316 AVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVK 375
Query: 413 -------GLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
GL + Y + A + + + T +L++ CK EF A++L
Sbjct: 376 TSNEVVRGLCANYPS-----RAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQL 430
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
++E+ G P+ + LI K + ++ LL D+
Sbjct: 431 VDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASDTLLRDL 470
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 143/308 (46%), Gaps = 22/308 (7%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSV-- 254
+ N +I+ ++G+ + A +V +G + TY I+ ++ + V
Sbjct: 191 IYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDM 250
Query: 255 -CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISS 311
++M+E G P + G +I+ +CK A V+ +++ + SVV + LIS
Sbjct: 251 LLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGI--AASVVTYNSLISG 308
Query: 312 LCQE---DETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKM 364
LC E +E VKL +M D + P F V++ C+ + A + M
Sbjct: 309 LCSEGKVEEGVKLMEEMED--------LGLSPNEITFGCVLKGFCKKGMMADANDWIDGM 360
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
P ++N +I Y + G M AM + + M +G+ P+V TY L++G++ G
Sbjct: 361 TERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDW 420
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
A +L+E K+ VTY+ LI C E A+KLL+EM +VG++PN YN +
Sbjct: 421 RSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTI 480
Query: 485 IQSLCLKA 492
IQ C K
Sbjct: 481 IQGFCDKG 488
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 146/328 (44%), Gaps = 4/328 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGV-LTVEILNELIALFSKLGKGKAAFEVF 220
++L+ C G +Y + ++KE+ E G+ T LI + K AA VF
Sbjct: 230 NSLIDGYCKKGGAGNMYHVDMLLKEM--VEAGISPTAVTFGVLINGYCKNSNTAAAVRVF 287
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ G A+ TY I L + + E+M + G P+ G ++ FCK
Sbjct: 288 EEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKK 347
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
G +A+ E+ + P + LI + + ++ A+ + + + + +
Sbjct: 348 GMMADANDWIDGMTERNVEPDVVIYNILID-VYRRLGKMEDAMAVKEAMAKKGISPNVTT 406
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++ +I R D A LL +M +G +N +I A G++ A+++L M
Sbjct: 407 YNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMS 466
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
GL+P+ TY ++ G+ + G ++ A EI +K R + VTY+ I+ +C++ + D
Sbjct: 467 EVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMD 526
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSL 488
A LLNEM D + PN Y + + +
Sbjct: 527 EANDLLNEMLDKCLVPNGITYETIKEGM 554
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 118/257 (45%), Gaps = 9/257 (3%)
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL-AL 323
PD +IS C+ G+ ++A V + + P + LI C++ + +
Sbjct: 189 PDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHV 248
Query: 324 DMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
DML EA I P F +I C+ + A + +M +G +NS+
Sbjct: 249 DMLLKEMVEA---GISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSL 305
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
IS G + +++++ M GL P+ T+ ++ G+ G M +A + ++ + +
Sbjct: 306 ISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNV 365
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
V Y+ LI Y +L + + A+ + M G+ PNV YN LI ++ DWR+A
Sbjct: 366 EPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFS-RSGDWRSAS 424
Query: 500 KLLEDMRLKGLHLNGIT 516
LL++M+ KG+ + +T
Sbjct: 425 GLLDEMKEKGIEADVVT 441
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 13/176 (7%)
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P + N++++ A + A + + R + PD+YT+ ++SG GQ+ +A ++
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCK------LEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
+ K S TY++LI GYCK + D LL EM + G+ P + L
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVD---MLLKEMVEAGISPTAVTFGVL 270
Query: 485 IQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAVKELEEDAIENGEALVE 539
I C K + A ++ E+M+ +G+ + +T +LI + E +E G L+E
Sbjct: 271 INGYC-KNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGL--CSEGKVEEGVKLME 323
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCA 462
+P + L++G +++ A + A + R+SP T++T+I G C++ + A
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRR--RVSPDIYTFNTVISGLCRIGQLRKA 210
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLK--ALDWRTAEKLLEDMRLKGLHLNGIT 516
+ ++K G+ P+V YN LI C K A + + LL++M G+ +T
Sbjct: 211 GDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVT 266
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 142/312 (45%), Gaps = 18/312 (5%)
Query: 211 GKGKAAFEVFNKFGDYG--CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSE 268
GK A ++ + G C N Y I+ + + A + ++M++ G PD
Sbjct: 196 GKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLV 255
Query: 269 KVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI---SSLCQEDETVKLALDM 325
++ CK +A K++ P LI SS Q E V++ +M
Sbjct: 256 TYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 315
Query: 326 LDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
R+++I P S ++ SLC+ + A+ + M +G P +N +++
Sbjct: 316 --------RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLN 367
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
Y+ G + ++ LM G+ PD YT+ L+ YAN G +++A I NE + + +
Sbjct: 368 GYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 427
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
VTY T+I C++ + D A++ N+M D GV P+ YN LIQ C A++L
Sbjct: 428 DVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHG-SLLKAKEL 486
Query: 502 LEDMRLKGLHLN 513
+ ++ G+HL+
Sbjct: 487 ISEIMNNGMHLD 498
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 134/296 (45%), Gaps = 9/296 (3%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V L+ L+ K GK K A +VF+ G + +Y + + + + +
Sbjct: 324 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 383
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ-- 314
M+ G PD +I + G +A +++ R+ + P +I++LC+
Sbjct: 384 LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 443
Query: 315 -EDETVKLALDMLDDFSGEA-RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
D+ ++ M+D G A KYA ++ +I+ C + AK L+S++++ G
Sbjct: 444 KMDDAMEKFNQMID--QGVAPDKYA---YNCLIQGFCTHGSLLKAKELISEIMNNGMHLD 498
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
F+S+I+ K G + A + L + GL PD Y+ LM GY G+ME+A + +
Sbjct: 499 IVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFD 558
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ V Y TL+ GYCK+ D L L EM G++P+ Y+ +I L
Sbjct: 559 AMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGL 614
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 149/362 (41%), Gaps = 38/362 (10%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
LLK++C + L ++ E G V N +I F K G A ++F +
Sbjct: 188 LLKSLCDQGKSGQADDLLRMMAEGGAVCSP--NVVAYNTVIDGFFKEGDVNKACDLFKEM 245
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
G + TY + AL + + D A + +M+ LP++ +I + G+
Sbjct: 246 VQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQW 305
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK-------- 335
KEA V+ R + P ++ L+ SLC+ + +K A D+ D + + +
Sbjct: 306 KEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGK-IKEARDVFDTMAMKGQNPDVFSYNI 364
Query: 336 ----YAIK-----------------------PFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
YA K F+ +I++ + A + ++M G
Sbjct: 365 MLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 424
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P + +VI+A + G M AME M +G+ PD Y Y L+ G+ G + +A
Sbjct: 425 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAK 484
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
E+++E N L V + ++I CKL A + + +VG+ P+ Y+ L+
Sbjct: 485 ELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGY 544
Query: 489 CL 490
CL
Sbjct: 545 CL 546
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 133/294 (45%), Gaps = 3/294 (1%)
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
GD G + T+ I+A + + D A + +M + G PD +I+ C+ GK
Sbjct: 386 LGD-GIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGK 444
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+A + ++ + P + LI C +K A +++ + I FS
Sbjct: 445 MDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLK-AKELISEIMNNGMHLDIVFFS 503
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
S+I +LC++ V A+ + ++ G P V++ ++ Y G M A+ + M S
Sbjct: 504 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 563
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G++P+V Y L++GY G+++E + E + + S + Y +I G + A
Sbjct: 564 GIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPA 623
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+EM + G+ ++ YN +++ L K + A L +++R + +N IT
Sbjct: 624 KVKFHEMTESGIAMDICTYNIVLRGL-FKNRCFDEAIFLFKELRAMNVKINIIT 676
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 125/289 (43%), Gaps = 1/289 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N LI ++ G A +FN+ D+G + TY I AL R D A +MI
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 456
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G PD +I FC G +A + + M+ + +I++LC+ +
Sbjct: 457 DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVM 516
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
A ++ D +S ++ C + + A + M+S G P V+ ++
Sbjct: 517 D-AQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTL 575
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
++ Y K G + + + + M RG+KP Y+ ++ G G+ A +E ++
Sbjct: 576 VNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGI 635
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ TY+ ++RG K FD A+ L E++ + V+ N+ N +I +
Sbjct: 636 AMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGM 684
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 116/267 (43%), Gaps = 38/267 (14%)
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDE 317
E G +PD ++ C GK+ +A + + E +VVA+ +I +E +
Sbjct: 175 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGD 234
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
K A D+ + + ++SV+ +LC+ + + A+ L +M+++ P N +N
Sbjct: 235 VNK-ACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYN 293
Query: 378 SVISAYSKAGDMTPAMEMLKLMRS-----------------------------------R 402
++I YS G A+ + K MR +
Sbjct: 294 NLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMK 353
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G PDV++Y +++GYA G + + ++ + + T++ LI+ Y D A
Sbjct: 354 GQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKA 413
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + NEM+D GV+P+V Y +I +LC
Sbjct: 414 MIIFNEMRDHGVKPDVVTYRTVIAALC 440
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 137/324 (42%), Gaps = 4/324 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+IA ++GK A E FN+ D G ++ Y I+ A + +++ G
Sbjct: 435 VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNG 494
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
D II+ CK G+ +A ++ L ++P V + L+ C + K A
Sbjct: 495 MHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEK-A 553
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
L + D + + + +++ C++ + +L +M+ G P +++ +I
Sbjct: 554 LRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDG 613
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+AG PA M G+ D+ TY ++ G +EA + E + + +++
Sbjct: 614 LFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKIN 673
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
+T +T+I G + + A L + + P+V Y+ +I +L + L AE +
Sbjct: 674 IITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGL-VEEAEDMF 732
Query: 503 EDMRLKGLHLNGITRALIRAVKEL 526
M+ G N +R L V+EL
Sbjct: 733 SSMQNAGCEPN--SRLLNHVVREL 754
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR--GLKPDVYTYTGL 414
A +++ G + N ++ + +A A+++L L R+ G PDV++Y+ L
Sbjct: 130 ALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDIL-LHRTPELGCVPDVFSYSIL 188
Query: 415 MSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
+ + G+ +A ++L + + SP V Y+T+I G+ K + + A L EM
Sbjct: 189 LKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQR 248
Query: 473 GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
G+ P++ YN ++ +LC KA AE L M
Sbjct: 249 GIPPDLVTYNSVVHALC-KARAMDKAEAFLRQM 280
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 13/146 (8%)
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT-----PAMEMLKLMRS-------RGL 404
A LL ++ G P N ++A ++A PA+ + R+ R L
Sbjct: 48 AHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQGPRVL 107
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
P +TY LM + E A + + R++ + + L+ G+C+ + D AL
Sbjct: 108 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALD 167
Query: 465 -LLNEMKDVGVQPNVDEYNKLIQSLC 489
LL+ ++G P+V Y+ L++SLC
Sbjct: 168 ILLHRTPELGCVPDVFSYSILLKSLC 193
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 142/312 (45%), Gaps = 18/312 (5%)
Query: 211 GKGKAAFEVFNKFGDYG--CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSE 268
GK A ++ + G C N Y I+ + + A + ++M++ G PD
Sbjct: 209 GKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLV 268
Query: 269 KVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI---SSLCQEDETVKLALDM 325
++ CK +A K++ P LI SS Q E V++ +M
Sbjct: 269 TYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 328
Query: 326 LDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
R+++I P S ++ SLC+ + A+ + M +G P +N +++
Sbjct: 329 --------RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLN 380
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
Y+ G + ++ LM G+ PD YT+ L+ YAN G +++A I NE + + +
Sbjct: 381 GYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 440
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
VTY T+I C++ + D A++ N+M D GV P+ YN LIQ C A++L
Sbjct: 441 DVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHG-SLLKAKEL 499
Query: 502 LEDMRLKGLHLN 513
+ ++ G+HL+
Sbjct: 500 ISEIMNNGMHLD 511
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 134/296 (45%), Gaps = 9/296 (3%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V L+ L+ K GK K A +VF+ G + +Y + + + + +
Sbjct: 337 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 396
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ-- 314
M+ G PD +I + G +A +++ R+ + P +I++LC+
Sbjct: 397 LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 456
Query: 315 -EDETVKLALDMLDDFSGEA-RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
D+ ++ M+D G A KYA ++ +I+ C + AK L+S++++ G
Sbjct: 457 KMDDAMEKFNQMID--QGVAPDKYA---YNCLIQGFCTHGSLLKAKELISEIMNNGMHLD 511
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
F+S+I+ K G + A + L + GL PD Y+ LM GY G+ME+A + +
Sbjct: 512 IVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFD 571
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ V Y TL+ GYCK+ D L L EM G++P+ Y+ +I L
Sbjct: 572 AMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGL 627
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 152/364 (41%), Gaps = 42/364 (11%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEIL--NELIALFSKLGKGKAAFEVFN 221
LLK++C + L ++ E G V + ++ N +I F K G A ++F
Sbjct: 201 LLKSLCDQGKSGQADDLLRMMAEGG----AVCSPNVVAYNTVIDGFFKEGDVNKACDLFK 256
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ G + TY + AL + + D A + +M+ LP++ +I + G
Sbjct: 257 EMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTG 316
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK------ 335
+ KEA V+ R + P ++ L+ SLC+ + +K A D+ D + + +
Sbjct: 317 QWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGK-IKEARDVFDTMAMKGQNPDVFSY 375
Query: 336 ------YAIK-----------------------PFSSVIRSLCRMKDVHGAKTLLSKMIS 366
YA K F+ +I++ + A + ++M
Sbjct: 376 NIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRD 435
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
G P + +VI+A + G M AME M +G+ PD Y Y L+ G+ G + +
Sbjct: 436 HGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLK 495
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A E+++E N L V + ++I CKL A + + +VG+ P+ Y+ L+
Sbjct: 496 AKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMD 555
Query: 487 SLCL 490
CL
Sbjct: 556 GYCL 559
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 133/294 (45%), Gaps = 3/294 (1%)
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
GD G + T+ I+A + + D A + +M + G PD +I+ C+ GK
Sbjct: 399 LGD-GIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGK 457
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+A + ++ + P + LI C +K A +++ + I FS
Sbjct: 458 MDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLK-AKELISEIMNNGMHLDIVFFS 516
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
S+I +LC++ V A+ + ++ G P V++ ++ Y G M A+ + M S
Sbjct: 517 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 576
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G++P+V Y L++GY G+++E + E + + S + Y +I G + A
Sbjct: 577 GIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPA 636
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+EM + G+ ++ YN +++ L K + A L +++R + +N IT
Sbjct: 637 KMKFHEMTESGIAMDICTYNIVLRGL-FKNRCFDEAIFLFKELRAMNVKINIIT 689
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 125/289 (43%), Gaps = 1/289 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N LI ++ G A +FN+ D+G + TY I AL R D A +MI
Sbjct: 410 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 469
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G PD +I FC G +A + + M+ + +I++LC+ +
Sbjct: 470 DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVM 529
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
A ++ D +S ++ C + + A + M+S G P V+ ++
Sbjct: 530 D-AQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTL 588
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
++ Y K G + + + + M RG+KP Y+ ++ G G+ A +E ++
Sbjct: 589 VNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGI 648
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ TY+ ++RG K FD A+ L E++ + V+ N+ N +I +
Sbjct: 649 AMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGM 697
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 137/324 (42%), Gaps = 4/324 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+IA ++GK A E FN+ D G ++ Y I+ A + +++ G
Sbjct: 448 VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNG 507
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
D II+ CK G+ +A ++ L ++P V + L+ C + K A
Sbjct: 508 MHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEK-A 566
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
L + D + + + +++ C++ + +L +M+ G P +++ +I
Sbjct: 567 LRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDG 626
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+AG PA M G+ D+ TY ++ G +EA + E + + +++
Sbjct: 627 LFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKIN 686
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
+T +T+I G + + A L + + PNV Y+ +I +L + L AE +
Sbjct: 687 IITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGL-VEEAEDMF 745
Query: 503 EDMRLKGLHLNGITRALIRAVKEL 526
M+ G N +R L V+EL
Sbjct: 746 SSMQNAGCEPN--SRLLNHVVREL 767
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 116/267 (43%), Gaps = 38/267 (14%)
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDE 317
E G +PD ++ C GK+ +A + + E +VVA+ +I +E +
Sbjct: 188 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGD 247
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
K A D+ + + ++SV+ +LC+ + + A+ L +M+++ P N +N
Sbjct: 248 VNK-ACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYN 306
Query: 378 SVISAYSKAGDMTPAMEMLKLMRS-----------------------------------R 402
++I YS G A+ + K MR +
Sbjct: 307 NLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMK 366
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G PDV++Y +++GYA G + + ++ + + T++ LI+ Y D A
Sbjct: 367 GQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKA 426
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + NEM+D GV+P+V Y +I +LC
Sbjct: 427 MIIFNEMRDHGVKPDVVTYRTVIAALC 453
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR--GLKPDVYTYTGL 414
A +++ G + N ++ + +A A+++L L R+ G PDV++Y+ L
Sbjct: 143 ALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDIL-LHRTPELGCVPDVFSYSIL 201
Query: 415 MSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
+ + G+ +A ++L + + SP V Y+T+I G+ K + + A L EM
Sbjct: 202 LKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQR 261
Query: 473 GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
G+ P++ YN ++ +LC KA AE L M
Sbjct: 262 GIPPDLVTYNSVVHALC-KARAMDKAEAFLRQM 293
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 13/146 (8%)
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT-----PAMEMLKLMRS-------RGL 404
A LL ++ G P N ++A ++A PA+ + R+ R L
Sbjct: 61 AHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQGPRVL 120
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
P +TY LM + E A + + R++ + + L+ G+C+ + D AL
Sbjct: 121 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALD 180
Query: 465 -LLNEMKDVGVQPNVDEYNKLIQSLC 489
LL+ ++G P+V Y+ L++SLC
Sbjct: 181 ILLHRTPELGCVPDVFSYSILLKSLC 206
>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 579
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 156/347 (44%), Gaps = 19/347 (5%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N ++A K+ A +F + G + T + + +S+ K++
Sbjct: 13 FNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILTKIL 72
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G P+S +I C G+A EA + + Q A L++ LC+ ET
Sbjct: 73 KMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGET- 131
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
+ A+ ML A + +S++I SLC+ K V A L S+MI++G P F+ +
Sbjct: 132 RAAMQMLRKTWVNAD---VVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSIL 188
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+ A K AM +L +M +G+KP+V TY +M GY Q+ +A I N +
Sbjct: 189 VDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGV 248
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
+ Y+ +I G CK + D A+ L EM + P+V YN LI LC K T+
Sbjct: 249 EPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLC-KLGKISTSL 307
Query: 500 KLLEDMRLKG-----LHLNGITRAL---------IRAVKELEEDAIE 532
+L+++MR G + N + AL I VKE+++ I+
Sbjct: 308 ELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQ 354
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 120/240 (50%), Gaps = 2/240 (0%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
II CKG +A+ +Y+ K ++P + L+ +LC+ D K A+++L +
Sbjct: 153 IIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCK-DRKGKQAMNLLAMMMKK 211
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
K + + +++ C + V+ A + + M+ EG P +N +I+ K + A
Sbjct: 212 GVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEA 271
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
M + K M + + PDV TY L+ G G++ + E+++E + + +TY++L+
Sbjct: 272 MNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHA 331
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
CK D A+ L+ E+KD G+QPNV Y LI LC K A + +++ +G H+
Sbjct: 332 LCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLC-KDGRLEDAYVIFQEILTEGYHI 390
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 151/309 (48%), Gaps = 5/309 (1%)
Query: 205 ALFSKLGKGK---AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET 261
+ L KGK A+ ++++ G N T+ ++AL + + A ++ M++
Sbjct: 152 TIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKK 211
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
G P+ G I+ +C + +A ++ + ++ + P +I+ LC++ + V
Sbjct: 212 GVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKK-KRVDE 270
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A+++ + + + ++ +I LC++ + + L+ +M S G +NS++
Sbjct: 271 AMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLH 330
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
A K + A+ ++K ++ +G++P+V TYT L+ G G++E+A I E +
Sbjct: 331 ALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHI 390
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+ TY+ +I G CK FD AL LL+ M+D P+ Y +I +L K +T KL
Sbjct: 391 TVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKT-NKL 449
Query: 502 LEDMRLKGL 510
L M ++GL
Sbjct: 450 LCAMIVRGL 458
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 4/183 (2%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
I F+ ++ SL ++ A +L ++ G P +++ Y G +T +L
Sbjct: 10 ILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILT 69
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
+ G +P+ T+T L+ G GQ EA + + +L V+Y L+ G CK+
Sbjct: 70 KILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMG 129
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITR 517
E A+++L + V +V Y+ +I SLC K A +L +M KG+ N T
Sbjct: 130 ETRAAMQML---RKTWVNADVVMYSTIIDSLC-KGKFVTDAYRLYSEMIAKGIFPNVYTF 185
Query: 518 ALI 520
+++
Sbjct: 186 SIL 188
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 186/427 (43%), Gaps = 15/427 (3%)
Query: 101 GDKLENVLSLLQSSVD-GYLESSLDSFELDLHEDFVLKVLETPLVLGENLV---CFFKWV 156
G ++ + ++L+ V+ GY ++ +F +H F+ + L + +V C V
Sbjct: 93 GKRISDAVALVDQMVEMGYRPDTI-TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV 151
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA 216
T GVV + +C + ++ ++++ ++ E K V I N +I K A
Sbjct: 152 TYGVV---VNGLCK---RGDIDLAFNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDA 204
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
+F + G N TY I L + A + MIE P+ +I
Sbjct: 205 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 264
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
F K GK EA ++ ++ + P LI+ C D K A M + +
Sbjct: 265 FVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK-AKQMFEFMVSKDCFP 323
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ ++++I+ C+ K V L +M G + ++I GD A ++
Sbjct: 324 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 383
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
K M S G+ PD+ TY+ L+ G N G++E+A E+ + +K+ +L Y T+I G CK
Sbjct: 384 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 443
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG-LHLNGI 515
+ D L + GV+PNV YN +I LC K L + A LL+ M+ G L +G
Sbjct: 444 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL-LQEAYALLKKMKEDGPLPDSGT 502
Query: 516 TRALIRA 522
LIRA
Sbjct: 503 YNTLIRA 509
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 134/291 (46%), Gaps = 1/291 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N+L++ +K+ K + K G N TY I RR A ++ KM+
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G P + +++ +C G + +A + E P LI L ++
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
+ A+ ++D + + + V+ LC+ D+ A LL+KM + +FN++
Sbjct: 133 E-AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 191
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I + K + A+ + K M ++G++P+V TY+ L+S + G+ +A ++L++ +
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
+ VT++ LI + K +F A KL ++M + P++ YN LI C+
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCM 302
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 133/273 (48%), Gaps = 10/273 (3%)
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA-REKKMYPPQSVVAF--LISSLCQ 314
M+++ LP + K++S K K+ +V +L + +++ ++ + LI+ C+
Sbjct: 1 MVKSRPLPSIFEFNKLLSAI---AKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCR 57
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
+ + LAL +L + +I SS++ C K + A L+ +M+ G P
Sbjct: 58 RSQ-ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 116
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
F ++I + A+ ++ M RG +P++ TY +++G G ++ A +LN+
Sbjct: 117 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 176
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
+ V ++T+I CK D AL L EM+ G++PNV Y+ LI LC
Sbjct: 177 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG-R 235
Query: 495 WRTAEKLLEDMRLKGLHLNGIT-RALIRA-VKE 525
W A +LL DM K ++ N +T ALI A VKE
Sbjct: 236 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 268
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 109/231 (47%), Gaps = 2/231 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
++ N LI F K + + E+F + G V + TY I+ L D A V +
Sbjct: 325 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 384
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M+ G PD ++ C GK ++A V+ ++ ++ + +I +C+
Sbjct: 385 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 444
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ V D+ S + K + ++++I LC + + A LL KM +GP P + +
Sbjct: 445 K-VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTY 503
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
N++I A+ + GD + E+++ MRS D T GL++ + G+++++
Sbjct: 504 NTLIRAHLRDGDKAASAELIREMRSCRFVGDAST-IGLVANMLHDGRLDKS 553
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/303 (19%), Positives = 122/303 (40%), Gaps = 36/303 (11%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI+ G+ A ++ + + N T+ I+A + F A + + MI+
Sbjct: 226 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 285
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD +I+ FC + +A ++ K +P LI C+ + V+
Sbjct: 286 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKS-KRVEDG 344
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++ + S ++++I+ L D A+ + +M+S+G PP ++ ++
Sbjct: 345 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 404
Query: 383 YSKAGDMTPAMEMLKLMRS-----------------------------------RGLKPD 407
G + A+E+ M+ +G+KP+
Sbjct: 405 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 464
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
V TY ++SG + ++EA +L + K++ TY+TLIR + + + + +L+
Sbjct: 465 VVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIR 524
Query: 468 EMK 470
EM+
Sbjct: 525 EMR 527
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 7/164 (4%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
LL +C++ ++ ++D + +K + L + I +I K GK +++F
Sbjct: 401 LLDGLCNNGKLEKALEVFDYM----QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 456
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK-GGK 282
G N TY I L +++ A+++ +KM E G LPDS +I + G K
Sbjct: 457 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDK 516
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
A A ++ + R + S + L++++ + K LDML
Sbjct: 517 AASAELIREM-RSCRFVGDASTIG-LVANMLHDGRLDKSFLDML 558
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 186/427 (43%), Gaps = 15/427 (3%)
Query: 101 GDKLENVLSLLQSSVD-GYLESSLDSFELDLHEDFVLKVLETPLVLGENLV---CFFKWV 156
G ++ + ++L+ V+ GY ++ +F +H F+ + L + +V C V
Sbjct: 92 GKRISDAVALVDQMVEMGYRPDTI-TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV 150
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA 216
T GVV + +C + ++ ++++ ++ E K V I N +I K A
Sbjct: 151 TYGVV---VNGLCK---RGDIDLAFNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDA 203
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
+F + G N TY I L + A + MIE P+ +I
Sbjct: 204 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 263
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
F K GK EA ++ ++ + P LI+ C D K A M + +
Sbjct: 264 FVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK-AKQMFEFMVSKDCFP 322
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ ++++I+ C+ K V L +M G + ++I GD A ++
Sbjct: 323 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 382
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
K M S G+ PD+ TY+ L+ G N G++E+A E+ + +K+ +L Y T+I G CK
Sbjct: 383 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 442
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG-LHLNGI 515
+ D L + GV+PNV YN +I LC K L + A LL+ M+ G L +G
Sbjct: 443 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL-LQEAYALLKKMKEDGPLPDSGT 501
Query: 516 TRALIRA 522
LIRA
Sbjct: 502 YNTLIRA 508
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 3/191 (1%)
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+I SS++ C K + A L+ +M+ G P F ++I + A+ ++
Sbjct: 78 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 137
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
M RG +P++ TY +++G G ++ A +LN+ + V ++T+I CK
Sbjct: 138 DRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKY 197
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
D AL L EM+ G++PNV Y+ LI LC W A +LL DM K ++ N +T
Sbjct: 198 RHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG-RWSDASQLLSDMIEKKINPNLVT 256
Query: 517 -RALIRA-VKE 525
ALI A VKE
Sbjct: 257 FNALIDAFVKE 267
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 93/182 (51%), Gaps = 3/182 (1%)
Query: 337 AIKPFSSVIRSLCRMK--DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
+I F+ ++ ++ +MK D+ + LL KM+ G P +S+++ Y ++ A+
Sbjct: 41 SIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 100
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
++ M G +PD T+T L+ G + EA +++ + + + VTY ++ G C
Sbjct: 101 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 160
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG 514
K + D A LLN+M+ ++ +V +N +I SLC K A L ++M KG+ N
Sbjct: 161 KRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLC-KYRHVDDALNLFKEMETKGIRPNV 219
Query: 515 IT 516
+T
Sbjct: 220 VT 221
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 109/231 (47%), Gaps = 2/231 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
++ N LI F K + + E+F + G V + TY I+ L D A V +
Sbjct: 324 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 383
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M+ G PD ++ C GK ++A V+ ++ ++ + +I +C+
Sbjct: 384 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 443
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ V D+ S + K + ++++I LC + + A LL KM +GP P + +
Sbjct: 444 K-VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTY 502
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
N++I A+ + GD + E+++ MRS D T GL++ + G+++++
Sbjct: 503 NTLIRAHLRDGDKAASAELIREMRSCRFVGDAST-IGLVANMLHDGRLDKS 552
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/305 (19%), Positives = 123/305 (40%), Gaps = 36/305 (11%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
+ LI+ G+ A ++ + + N T+ I+A + F A + + MI+
Sbjct: 223 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK 282
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
PD +I+ FC + +A ++ K +P LI C+ + V+
Sbjct: 283 RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKS-KRVE 341
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
++ + S ++++I+ L D A+ + +M+S+G PP ++ ++
Sbjct: 342 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 401
Query: 381 SAYSKAGDMTPAMEMLKLMRS-----------------------------------RGLK 405
G + A+E+ M+ +G+K
Sbjct: 402 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 461
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
P+V TY ++SG + ++EA +L + K++ TY+TLIR + + + + +L
Sbjct: 462 PNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 521
Query: 466 LNEMK 470
+ EM+
Sbjct: 522 IREMR 526
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 7/164 (4%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
LL +C++ ++ ++D + +K + L + I +I K GK +++F
Sbjct: 400 LLDGLCNNGKLEKALEVFDYM----QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 455
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK-GGK 282
G N TY I L +++ A+++ +KM E G LPDS +I + G K
Sbjct: 456 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDK 515
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
A A ++ + R + S + L++++ + K LDML
Sbjct: 516 AASAELIREM-RSCRFVGDASTIG-LVANMLHDGRLDKSFLDML 557
>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 154/348 (44%), Gaps = 44/348 (12%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N + F K+G A E + N TY ++ +R + A+ +C++++E
Sbjct: 240 NSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVE 299
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DE 317
G LP+S II W G + A ++ + +K++YP Q + +I LC+ +E
Sbjct: 300 KGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNE 359
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLS--------------- 362
K L M+ + S ++ + VI LCR ++ GAK LL+
Sbjct: 360 AFKF-LQMILEMSLVRDAFS---HNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFG 415
Query: 363 --------------------KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
KMI G P ++NSVI+ ++K G PA+ ++ +R
Sbjct: 416 TLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRM 475
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
GL DV TY L+ GY N G++++A + +E + + S VTY+TLI CK A
Sbjct: 476 GLF-DVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQA 534
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+L+ M G+ P+ Y LI S K E L + M LKG+
Sbjct: 535 KELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIE-LHDYMVLKGV 581
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 151/339 (44%), Gaps = 14/339 (4%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA 216
+ V DAL++ C+ +G E ++++ ++ + + +TV N ++ KL
Sbjct: 92 SPAVFDALVRT-CTQIGATE--GAYEVITKL-QLDGFWVTVHAWNNFLSHLLKLNDVNRF 147
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
++++ + YG + N T+ I AL + A SV + ++TG P+ II
Sbjct: 148 WKMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDG 207
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSV----VAF--LISSLCQEDETVKLALDMLDDFS 330
K G A L R+ ++ SV V + ++ C+ + +A + +
Sbjct: 208 AIKMGAMDLA---LKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGN-LAVAEEFKKEML 263
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
G+ + ++ +++++ R+ + A L +++ +G P + ++NS+I S GDM
Sbjct: 264 GKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDME 323
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A +L M + + PD +TY+ ++ G G + EA + L + +++ +I
Sbjct: 324 GASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVI 383
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
C+ A +LL M G+ P+V + LI C
Sbjct: 384 NYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHC 422
>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
Length = 899
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 130/299 (43%), Gaps = 39/299 (13%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
GC N TY I+ L + A V E+M G +P +I +CK G+ K+A
Sbjct: 190 GCSLNLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDA 249
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQE--DE---------------TVKLALDMLDDF 329
+ L P LI LC E DE TV ++++ +
Sbjct: 250 LGIKALMERNGCNPDDWTYNILIYGLCGEKPDEAEELLNDAIVRGFTPTVITFTNIINGY 309
Query: 330 SGEAR----------------KYAIKPFSSVIRSL---CRMKDVHGAKTLLSKMISEGPP 370
R K ++ + +I L CR K+ AK +S+M + G
Sbjct: 310 CKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKE---AKETVSEMFANGLA 366
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P ++ S+I Y K G + A+E+ +LM G +P+ +TY+ L+ G ++ +A +
Sbjct: 367 PNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMAL 426
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + +++ +TY TLI+G CK EFD A +L M+ G+ P+ YN L +LC
Sbjct: 427 ITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALC 485
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 148/376 (39%), Gaps = 54/376 (14%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETY--------------------- 235
V I +I + K+GK AA EVF GC N TY
Sbjct: 369 VVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALIT 428
Query: 236 -------------YFT-IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
Y T I+ ++ FD A+ + E M + G PD + + CK G
Sbjct: 429 KMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSG 488
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+A+EA Y+ K + + L+ + T A +++ E K +
Sbjct: 489 RAEEA---YSFLVRKGVVLTKVTYTSLVDGFSKAGNT-DFAAVLIEKMVNEGCKADSYTY 544
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
S ++++LC+ K ++ A ++L +M G + +IS K G A M M S
Sbjct: 545 SVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMIS 604
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G KP TYT +S Y GQ+EEA ++ E +++ VTY+ I G + D
Sbjct: 605 SGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDR 664
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL------------DW---RTAEKLLEDMR 506
A L M D +PN Y L++ +L +W T +LLE M
Sbjct: 665 AFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMV 724
Query: 507 LKGLHLNGITRALIRA 522
GL+ +T + I A
Sbjct: 725 KHGLNPTAVTYSSIIA 740
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 155/365 (42%), Gaps = 35/365 (9%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGV-LTVEILNELIALFSKLGKGKAAFEVF 220
+ L A+C S +E Y+ +V+ KGV LT L+ FSK G A +
Sbjct: 478 NVLTHALCKSGRAEEAYSF--LVR------KGVVLTKVTYTSLVDGFSKAGNTDFAAVLI 529
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
K + GC A+ TY ++AL ++K + A S+ ++M +G + IIS K
Sbjct: 530 EKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKE 589
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
GK A ++ P + ISS C+ + ++ + GE + + P
Sbjct: 590 GKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQ-----IEEAEHLIGEMERDGVAP 644
Query: 341 ----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG--------- 387
++ I M + A + L +MI P + ++ + K
Sbjct: 645 DVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDT 704
Query: 388 -------DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
++ ++L+ M GL P TY+ +++G+ ++EEAC + + +
Sbjct: 705 SGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDIS 764
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+ Y LI+ C ++ F A+ + +M + G QP+++ Y+ LI LC + D+ A+
Sbjct: 765 PNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEG-DYDKAKS 823
Query: 501 LLEDM 505
L D+
Sbjct: 824 LFCDL 828
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 81/168 (48%), Gaps = 8/168 (4%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++ +I+ LC + V A LL M+ +G + +I K G + A +L+ M
Sbjct: 163 YTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEMP 222
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
RG+ P V+TY ++ GY G+M++A I ++N TY+ LI G C E+ D
Sbjct: 223 LRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLCG-EKPD 281
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLK 508
A +LLN+ G P V + +I C AE++ + +R+K
Sbjct: 282 EAEELLNDAIVRGFTPTVITFTNIINGYC-------KAERIDDALRVK 322
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 72/164 (43%), Gaps = 2/164 (1%)
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT 412
D+ A LL M G + +I + + A+ +L +M G +++TYT
Sbjct: 140 DLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYT 199
Query: 413 GLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
L+ G G++ A +L E S TY+ +I GYCK AL + M+
Sbjct: 200 LLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERN 259
Query: 473 GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
G P+ YN LI LC + D AE+LL D ++G IT
Sbjct: 260 GCNPDDWTYNILIYGLCGEKPD--EAEELLNDAIVRGFTPTVIT 301
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%)
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
GD+ A +L +M G + + Y+YT L+ G + EA +L ++ L+ T
Sbjct: 138 GGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHT 197
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
Y LI+G CK A ++L EM GV P+V YN +I C
Sbjct: 198 YTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYC 241
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 21/152 (13%)
Query: 361 LSKMISEGPPPGN--AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
L ++++ P N + S++S A DM A++ ++ +R G
Sbjct: 94 LLQLLARRRAPANYDKLVVSMVSCSDTAEDMREAVDAIQAIRRVG--------------- 138
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G + +AC +L R + +Y LI+G C+ AL LL M G N+
Sbjct: 139 ---GDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNL 195
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
Y LI+ LC K A ++LE+M L+G+
Sbjct: 196 HTYTLLIKGLC-KEGRIHGARRVLEEMPLRGV 226
>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 712
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 147/324 (45%), Gaps = 3/324 (0%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
E++ ++ FS++GK K A + + ++G V F I+ D+A V ++
Sbjct: 159 EVMQCMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDE 218
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M++ +PDS ++ +C+ G+ + E+ + +IS+ E
Sbjct: 219 MLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTF-SEKG 277
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
V A + + FSS+I LC++ + A +L +M+ +G P
Sbjct: 278 FVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHT 337
Query: 378 SVISAYSKAGDMTPAMEM-LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
++I K G A + LKL+RS KP+VYTYT +++GY ++ A +L K+
Sbjct: 338 ALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKE 397
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ TY LI G+CK F A +L++ M G PN+ YN +I LC K +
Sbjct: 398 QGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKG-RFP 456
Query: 497 TAEKLLEDMRLKGLHLNGITRALI 520
A KLL GLH + +T ++
Sbjct: 457 EAYKLLRRGLKSGLHADKVTYTIL 480
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 125/278 (44%), Gaps = 1/278 (0%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G + T I S + + A+ +K ++ G P+ +I+ CK G K+A
Sbjct: 258 GYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQA 317
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
+ K P LI LC++ T K L + K + ++ +I
Sbjct: 318 FEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMIN 377
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
C+ + ++ A+ LL +M +G P + +I + KAG+ A E++ LM G P
Sbjct: 378 GYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTP 437
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
+++TY ++ G G+ EA ++L K+ VTY LI +C+ + AL +
Sbjct: 438 NIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIF 497
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLED 504
+ M VG+QP++ YN LI + C + +EKL E+
Sbjct: 498 SRMFKVGLQPDMHTYNVLIATFC-RQKKVEESEKLFEE 534
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 117/263 (44%), Gaps = 4/263 (1%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G V N TY I+ + F A+ + + M + G P+ II CK G+ EA
Sbjct: 399 GLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEA 458
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
+ + + ++ + LIS C++ + K AL + + + ++ +I
Sbjct: 459 YKLLRRGLKSGLHADKVTYTILISEFCRQTDN-KQALAIFSRMFKVGLQPDMHTYNVLIA 517
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
+ CR K V ++ L + + G P + S+I Y + G ++ A++ MR G KP
Sbjct: 518 TFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKP 577
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
D TY L+SG N +++EAC++ N VT TL YCK + A+ +L
Sbjct: 578 DSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIIL 637
Query: 467 NEMKDVGVQPNVDEYNKLIQSLC 489
++ + + N LI+ LC
Sbjct: 638 ERLEK---KLWIRTVNTLIRKLC 657
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 86/206 (41%), Gaps = 12/206 (5%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
L+ C K+ A++ + ++G + + N LIA F + K + + ++F +
Sbjct: 480 LISEFCRQTDNKQALAIFSRMFKVGLQPD----MHTYNVLIATFCRQKKVEESEKLFEEA 535
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
G + +ETY I R A KM + G PDS G +IS C K
Sbjct: 536 VGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKL 595
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE--TVKLALDMLDDFSGEARKYAIKPF 341
EA +Y + + P + L C++ + T + L+ L+ +K I+
Sbjct: 596 DEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERLE------KKLWIRTV 649
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISE 367
+++IR LC K V A K++ +
Sbjct: 650 NTLIRKLCSEKKVGVAALFFHKLLDK 675
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 79/185 (42%), Gaps = 2/185 (1%)
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
A + ++RS + + A ++ +M + G + N VI G + A ++
Sbjct: 157 ATEVMQCMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVF 216
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
M R + PD +Y ++ GY G++ + L + + + T +I + +
Sbjct: 217 DEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEK 276
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ A + +G+ PN+ ++ LI LC K + A ++LE+M KG N T
Sbjct: 277 GFVNRAFWYFKKWVQMGLNPNLINFSSLINGLC-KIGSIKQAFEMLEEMVRKGWKPNVYT 335
Query: 517 R-ALI 520
ALI
Sbjct: 336 HTALI 340
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 129/279 (46%), Gaps = 2/279 (0%)
Query: 238 TIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKK 297
+ L R + + E M+ G +PD +I FCK GK ++A + + +
Sbjct: 90 NLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSG 149
Query: 298 MYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGA 357
P LIS +C + A +L D ++ F+ +I LCR + A
Sbjct: 150 AVPDVITYNVLISGMCSTGRWMD-AEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRA 208
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
+L KM G P + +N ++ + K M A+E L M SRG PD+ TY L++
Sbjct: 209 IDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTA 268
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
G+++ A E+LN+ +TY+T+I G K+ + D A KLL+EM+ G++P+
Sbjct: 269 LCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPD 328
Query: 478 VDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ Y+ L+ L + A K D+ + G+ N IT
Sbjct: 329 IITYSSLVGGLSREG-KVDEAIKFFHDLEVLGVKPNAIT 366
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 147/308 (47%), Gaps = 2/308 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F K+GK + A + D G V + TY I + + A + M+ G
Sbjct: 125 LIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRG 184
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P +I++ C+ G A V + P L+ C+E + ++ A
Sbjct: 185 CSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKK-MERA 243
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++ L + I +++++ +LC+ V A LL+++ S+G P +N+VI
Sbjct: 244 IEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDG 303
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
SK G A ++L MR++GLKPD+ TY+ L+ G + G+++EA + ++ + + +
Sbjct: 304 LSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPN 363
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
+TY+ ++ G CK + D A+ L M G +P Y LI+ L + L + A +LL
Sbjct: 364 AITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGL-AKEALELL 422
Query: 503 EDMRLKGL 510
++ L+G+
Sbjct: 423 NELCLRGV 430
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 1/140 (0%)
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N+ +S + G++ L+ M RG PD+ T L+ G+ G+ +A I+ +
Sbjct: 88 NNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIED 147
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ + +TY+ LI G C + A KLL +M G P+V +N LI LC K L R
Sbjct: 148 SGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGR 207
Query: 497 TAEKLLEDMRLKGLHLNGIT 516
+ +LE M G N ++
Sbjct: 208 AID-VLEKMPKHGCTPNSLS 226
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 131/285 (45%), Gaps = 2/285 (0%)
Query: 226 YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKE 285
+G V + Y I R + A V ++M+ G LPD +++ CK + +
Sbjct: 10 FGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLD 69
Query: 286 AHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVI 345
A + RE+ + P LI C E + K AL + D + + I ++++I
Sbjct: 70 AEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDK-ALQLFDTMLNQRLRPDIVTYNTLI 128
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
+CR D+ A L M S P + ++ +I ++ + G + A L M ++G+
Sbjct: 129 DGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGIL 188
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
P++ TY ++ GY G + + + L + N +TY+TLI GY K ++ A KL
Sbjct: 189 PNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKL 248
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
LN M+ VQP+V YN LI + + + A + E M KG+
Sbjct: 249 LNMMEKEKVQPDVVTYNMLINGFSVHG-NVQEAGWIFEKMCAKGI 292
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 143/313 (45%), Gaps = 4/313 (1%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSR-RKIFDWAWSVCEK 257
I +I F + G A V ++ GC+ + TY + L + R++ D A + +
Sbjct: 18 IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLD-AEGLLNE 76
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M E G PD +I +C GK +A ++ +++ P LI +C++ +
Sbjct: 77 MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 136
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
K A D+ DD +S +I S C V A L +MI++G P +N
Sbjct: 137 LDK-ANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYN 195
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
S+I Y ++G+++ + L+ M + PD+ TY L+ GY +M +A ++LN +K
Sbjct: 196 SIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKE 255
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
+ VTY+ LI G+ A + +M G++P+ Y +I + A + +
Sbjct: 256 KVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGH-VTAGNSKE 314
Query: 498 AEKLLEDMRLKGL 510
A +L ++M +G
Sbjct: 315 AFQLHDEMLQRGF 327
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 82/160 (51%), Gaps = 1/160 (0%)
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
L +M G P ++ VI + +AG M+ A+ + M G PDV TY L++G
Sbjct: 4 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
++ +A +LNE ++ T+ TLI GYC + D AL+L + M + ++P++
Sbjct: 64 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
YN LI +C + D A L +DM + + N +T +++
Sbjct: 124 YNTLIDGMCRQG-DLDKANDLWDDMHSREIFPNHVTYSIL 162
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
M L+ MR GL PD YT ++ G+ G M +A + +E VTY+TL+ G
Sbjct: 1 MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 60
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC--------LKALDWRTAEKLLED 504
CK A LLNEM++ GV P++ + LI C L+ D ++L D
Sbjct: 61 LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 120
Query: 505 MRLKGLHLNGITR 517
+ ++G+ R
Sbjct: 121 IVTYNTLIDGMCR 133
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 83/207 (40%), Gaps = 1/207 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI + G A ++++ N TY I++ + + A+ ++MI
Sbjct: 125 NTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMIN 184
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G LP+ II +C+ G + K+ P LI +ED+ +
Sbjct: 185 KGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDK-MH 243
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A +L+ E + + ++ +I +V A + KM ++G P + S+I
Sbjct: 244 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 303
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPD 407
+ + AG+ A ++ M RG PD
Sbjct: 304 NGHVTAGNSKEAFQLHDEMLQRGFAPD 330
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 144/306 (47%), Gaps = 8/306 (2%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
L+ L+ F ++ K A V G N Y ++ L R F A S+ +M
Sbjct: 110 LSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMR 169
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQ-SVVAF--LISSLCQED 316
+ +PD +I FC+G KE LA E + S+V + LI + C+
Sbjct: 170 QNSLMPDVVSYNTVIRGFCEG---KELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAG 226
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ + A+ +L + + + + ++S+IR C ++ K L +++ G P +
Sbjct: 227 KMDE-AMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N++I + K G + A E+ + M RG++P+VYTYTGL+ G G+ +EA ++LN +
Sbjct: 286 NTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQ 345
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ VTY+ +I CK AL+++ MK +P+ YN L+ LC K D
Sbjct: 346 KDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKG-DLD 404
Query: 497 TAEKLL 502
A KLL
Sbjct: 405 EASKLL 410
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 123/251 (49%), Gaps = 1/251 (0%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
+ L R + + A+S KM+ET + + + ++ F + K AH V L ++
Sbjct: 79 MATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGF 138
Query: 299 YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
L+ LC+ E K A+ +L + + + +++VIR C K++ A
Sbjct: 139 AFNVYNYNILLKGLCRNLEFGK-AVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKAL 197
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
L ++M G + +I A+ KAG M AM +LK M+ +GL+ D+ YT L+ G+
Sbjct: 198 QLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGF 257
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
+ G+++ + +E + +TY+TLIRG+CKL A ++ M + GV+PNV
Sbjct: 258 CDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNV 317
Query: 479 DEYNKLIQSLC 489
Y LI LC
Sbjct: 318 YTYTGLIDGLC 328
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 146/342 (42%), Gaps = 41/342 (11%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F K GK A + + G A+ Y I D ++ ++++E G
Sbjct: 218 LIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P + +I FCK G+ KEA ++ E+ + P LI LC +T K A
Sbjct: 278 DSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKT-KEA 336
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
L +L+ + + + ++ +I LC+ V A ++ M P N +NS++
Sbjct: 337 LQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGG 396
Query: 383 YSKAGDMTPAMEMLKLM--RSRGLKPDVYTYTGLMSGYANGGQMEEACEI---------- 430
GD+ A ++L LM S PDV ++ L+ G G ++ +A +I
Sbjct: 397 LCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGA 456
Query: 431 ---------LNEAKKN--------------HSRLSPV--TYHTLIRGYCKLEEFDCALKL 465
LN K+ +S++ P TY T+I G+CK + A L
Sbjct: 457 GDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGL 516
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKA-LD--WRTAEKLLED 504
L +M+ + P+V +YN L+ SLC K LD WR E++ D
Sbjct: 517 LCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRD 558
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 139/327 (42%), Gaps = 7/327 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L++ C KE +++ + E G + V LI +GK K A ++ N
Sbjct: 286 NTLIRGFCKLGRLKEASEIFEFMMERGVRP----NVYTYTGLIDGLCGVGKTKEALQLLN 341
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
N TY I L + + A + E M + + PD+ ++ C G
Sbjct: 342 LMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKG 401
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
EA + L + Y V++F LI LC+ + + ALD+ D + I
Sbjct: 402 DLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNR-LHQALDIYDLLVEKLGAGDIV 460
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
+ ++ S + DV+ A L ++ + P + + ++I + K G + A +L M
Sbjct: 461 TTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKM 520
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
R L P V+ Y L+S G +++A + E +++ S ++++ +I G K +
Sbjct: 521 RLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDI 580
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A LL M G+ P++ Y+KLI
Sbjct: 581 KSAESLLVGMSHAGLSPDLFTYSKLIN 607
>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 479
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 129/263 (49%), Gaps = 1/263 (0%)
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A V KM + P + + + K A Y REK + P + LI
Sbjct: 104 AIRVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIK 163
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
+LC+ +ETV+ A + + + + ++I LC++ + AK LL +M +G
Sbjct: 164 ALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLS 223
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P + S+I ++ ++ A+E+L+ M G++P+V+TY+ LM G G +A E+
Sbjct: 224 PSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMEL 283
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
L + + VTY TLI G CK + A+++L+ M+ G++P+ Y ++I LC
Sbjct: 284 LEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLC- 342
Query: 491 KALDWRTAEKLLEDMRLKGLHLN 513
A +++ A +++M L G+ N
Sbjct: 343 AACNYQEAANFIDEMALGGISPN 365
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 103/238 (43%), Gaps = 8/238 (3%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI KLGK A E+ ++ + G + +Y I L + D A + E+MI G
Sbjct: 197 LINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIING 256
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P+ ++ CK G + +A + + +++ P + LI+ LC+E + + A
Sbjct: 257 IEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKH-REA 315
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA-------V 375
+++LD + K + +I LC + A + +M G P A +
Sbjct: 316 VEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGISPNRASWTFHVKM 375
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
N V+ D T A ++ MR+RG+ ++ T+ L+ + G + +A IL E
Sbjct: 376 HNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGTFDCLVKCFCKRGDLNKAARILEE 433
>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 806
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 154/322 (47%), Gaps = 8/322 (2%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
I N I +F + + + A + G V N TY I + A + E M
Sbjct: 279 ICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDM 338
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAH-VVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
G LPD I+ + CK + E ++ +A+E + P Q LI L + D
Sbjct: 339 HSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDH 398
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP-PPGNAVF 376
+ AL L D + + +S+++ +LC+ + AK L+++M+S+G PP +
Sbjct: 399 ADE-ALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTY 457
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
+V++ + + G++ A ++L++M + G KP+ +YT L++G G+ EA E++N +++
Sbjct: 458 TAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEE 517
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ + +TY ++ G + + A ++ EM G P E N L+QSLC D R
Sbjct: 518 HWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLC---RDGR 574
Query: 497 T--AEKLLEDMRLKGLHLNGIT 516
T A K +E+ KG +N +
Sbjct: 575 THEARKFMEECLNKGCAINVVN 596
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 133/289 (46%), Gaps = 4/289 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYG-CVANQETYYFTIEALSRRKIFDWAWSVCEKMIET 261
++ K G+ A ++ N+ G C + TY + R D A + + M
Sbjct: 424 IVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTH 483
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
G P++ +++ C+ GK+ EA + ++ E+ + P S+ +I + + +
Sbjct: 484 GHKPNTVSYTALLNGMCRTGKSLEAREMMNMS-EEHWWSPNSITYSVIMHGLRREGKLSE 542
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A D++ + + + +++SLCR H A+ + + +++G F +VI
Sbjct: 543 ACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIH 602
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
+ + ++ A+ +L M DV+TYT L+ G++ EA E++ +
Sbjct: 603 GFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDP 662
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
+PVTY T+I YC++ + D + +L +M + Q YN++I+ LC+
Sbjct: 663 TPVTYRTVIHRYCQMGKVDDLVAILEKM--ISRQKCRTIYNQVIEKLCV 709
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 138/332 (41%), Gaps = 11/332 (3%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
A++ C + L ++ G K V +LN + + GK A E+ N
Sbjct: 459 AVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGM----CRTGKSLEAREMMNM 514
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
++ N TY + L R A V +M+ G P ++ ++ C+ G+
Sbjct: 515 SEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGR 574
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
EA K +VV F +I CQ DE + AL +LDD + +
Sbjct: 575 THEARKFMEECLNKGC--AINVVNFTTVIHGFCQNDE-LDAALSVLDDMYLINKHADVFT 631
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+++++ +L + + A L+ KM+ +G P + +VI Y + G + + +L+ M
Sbjct: 632 YTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMI 691
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
SR +Y ++ G++EEA +L + + SR T + L+ GY K
Sbjct: 692 SRQKCRTIYNQ--VIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPL 749
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
A K+ M + + P+V KL + L LK
Sbjct: 750 SAYKVACRMFNRNLIPDVKMCEKLSKRLVLKG 781
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 4/189 (2%)
Query: 301 PQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTL 360
P V A L S Q+DE V L D R + + S++ L + K G++ +
Sbjct: 174 PSQVCAVLRS---QDDERVALKFFYWADRQWRYRHDPM-VYYSMLEVLSKTKLCQGSRRV 229
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
L M G F+ V+ +YS+AG + A+++L LM+ G++P++ + +
Sbjct: 230 LVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVR 289
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
++E+A L + + VTY+ +IRGYC L + A++LL +M G P+
Sbjct: 290 ANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVS 349
Query: 481 YNKLIQSLC 489
Y ++ LC
Sbjct: 350 YYTIMGYLC 358
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 1/149 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
FS V+ S R + A +L+ M G P + N+ I + +A + A+ L+ M+
Sbjct: 245 FSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQ 304
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G+ P+V TY ++ GY + ++EEA E+L + V+Y+T++ CK +
Sbjct: 305 VVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIV 364
Query: 461 CALKLLNEM-KDVGVQPNVDEYNKLIQSL 488
L+ +M K+ G+ P+ YN LI L
Sbjct: 365 EVRDLMKKMAKEHGLVPDQVTYNTLIHML 393
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 7/138 (5%)
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
V+ S++ SK + +L LM+ RG+ ++ +M Y+ GQ+ +A ++L
Sbjct: 209 VYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLM 268
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
++ + + +T I + + + AL+ L M+ VG+ PNV YN +I+ C D
Sbjct: 269 QRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYC----D 324
Query: 495 WRTAE---KLLEDMRLKG 509
E +LLEDM KG
Sbjct: 325 LHRVEEAIELLEDMHSKG 342
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 98/253 (38%), Gaps = 10/253 (3%)
Query: 182 DIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEA 241
D+V+E+ K VEI N L+ + G+ A + + + GC N + I
Sbjct: 545 DVVREMVLKGFFPGPVEI-NLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHG 603
Query: 242 LSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPP 301
+ D A SV + M D ++ K G+ EA + K + P
Sbjct: 604 FCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPT 663
Query: 302 QSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
+I CQ D+ V + M+ +R+ ++ VI LC + + A
Sbjct: 664 PVTYRTVIHRYCQMGKVDDLVAILEKMI------SRQKCRTIYNQVIEKLCVLGKLEEAD 717
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
TLL K++ +++ Y K G A ++ M +R L PDV L
Sbjct: 718 TLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRL 777
Query: 419 ANGGQMEEACEIL 431
G+++EA +++
Sbjct: 778 VLKGKVDEADKLM 790
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 154/329 (46%), Gaps = 10/329 (3%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFG-DYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
+L +I + K + A VF +F + G E+Y F IE + AW++ +
Sbjct: 756 VLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTE 815
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M G PD ++ K GK E +Y P +I++L + +
Sbjct: 816 MKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNS 875
Query: 318 TVKLALDMLDDF-SGEARKYAIKP--FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
K ALD+ D SG+ ++ P + ++ L + + AK L +M+ G P NA
Sbjct: 876 LDK-ALDLFYDLVSGD---FSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNA 931
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
++N +I+ + K GD+ A E+ K M G++PD+ +YT L+ G++++A +
Sbjct: 932 IYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKL 991
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
K+ L + Y+ +I G + + AL L +EM+ G+ P++ YN LI +L + +
Sbjct: 992 KQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGM- 1050
Query: 495 WRTAEKLLEDMRLKGLHLNGIT-RALIRA 522
A KL E+++ GL N T ALIR
Sbjct: 1051 VEQAGKLYEELQFIGLEPNVFTYNALIRG 1079
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 137/329 (41%), Gaps = 42/329 (12%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVL-TVEILNELIALFSKLGKGKAAFEVFNK 222
L+ A+C + E + L D++++ +GVL + N LI+ ++ + A ++FN
Sbjct: 375 LVNALCKAGNIDEAFHLLDVMRK-----QGVLPNLHTYNTLISGLLRVNRLDDALDLFNN 429
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G V TY I+ + D A EKM G P+ + + G+
Sbjct: 430 METLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGR 489
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+EA V++ + + P SV ++
Sbjct: 490 LREAKVIFNRLKSNGL-APDSVT-----------------------------------YN 513
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+++ + V A LLS M P V NS+I+ KAG + A +M ++
Sbjct: 514 MMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDM 573
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
L P V TY L++G GQ++ A E+ N + +T++T++ CK +E D A
Sbjct: 574 KLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLA 633
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
LK+L +M + P+V +N +I L ++
Sbjct: 634 LKMLYKMTTMNCMPDVLTFNTIIHGLVIE 662
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 132/307 (42%), Gaps = 5/307 (1%)
Query: 204 IALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGS 263
I + + G+ A + + D GC + TY I+AL D A + KM +
Sbjct: 271 IRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSH 330
Query: 264 LPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLAL 323
PD ++ F G ++ P L+++LC+ + A
Sbjct: 331 KPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGN-IDEAF 389
Query: 324 DMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAY 383
+LD + + ++++I L R+ + A L + M + G P + I Y
Sbjct: 390 HLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFY 449
Query: 384 SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
K+G A+E + M+ RG+ P++ + A G++ EA I N K N
Sbjct: 450 GKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDS 509
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL-- 501
VTY+ +++ Y K + D A++LL++M + +P++ N LI +L KA A K+
Sbjct: 510 VTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTL-YKAGRVDEAWKMFC 568
Query: 502 -LEDMRL 507
L+DM+L
Sbjct: 569 RLKDMKL 575
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 157/377 (41%), Gaps = 19/377 (5%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
L+ A+C++ + L+ +K K V + +L++ FS G E +++
Sbjct: 304 VLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDK----FSDCGDLGRVKEFWSE 359
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + T+ + AL + D A+ + + M + G LP+ +IS + +
Sbjct: 360 MEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNR 419
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+A ++ + P I + + K AL+ + I +
Sbjct: 420 LDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDK-ALETFEKMKIRGIAPNIVACN 478
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+ + SL M + AK + +++ S G P + +N ++ YSKAG + A+E+L M
Sbjct: 479 ASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSEN 538
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
+PD+ L++ G+++EA ++ K + VTY+TLI G K + A
Sbjct: 539 QCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRA 598
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLC--------LKALDWRTAEKLLEDMRLKGLHLNG 514
++L M G PN +N ++ LC LK L T + D+ L N
Sbjct: 599 MELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDV----LTFNT 654
Query: 515 ITRALIRAVKELEEDAI 531
I L+ +++ DAI
Sbjct: 655 IIHGLV--IEKRVSDAI 669
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 157/352 (44%), Gaps = 27/352 (7%)
Query: 202 ELIALFSKLGKGKAAFEVFNKFGDYGCVANQ-ETYYFTIEALS-RRKIFDWAWSVCEKMI 259
E++A+ + + AF FN + V + ET +E L R++ D V ++
Sbjct: 93 EVMAVLNSILDPTDAFSYFNSVAEMPFVVHTTETCNHMLEILRIHRRVGDMV--VVFNLM 150
Query: 260 ETGSLPDSEKVGKII--SWFCKGGKAKEAHVVYTLAREKKM----YPPQSVVAFLI-SSL 312
+ + II F +GG ++ + RE Y ++ L+ S L
Sbjct: 151 QNQIIKRDLNTYLIIFKGLFIRGG-LRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGL 209
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
C+E AL+M E K ++K FS+++ + + +D K+LL +M S G P
Sbjct: 210 CRE------ALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPN 263
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+ I +AG + A ++K M G PDV TYT L+ G++++A E+
Sbjct: 264 IYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFV 323
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
+ K + + VTY T++ + + + +EM+ G P+V + L+ +LC KA
Sbjct: 324 KMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALC-KA 382
Query: 493 LDWRTAEKLLEDMRLKG----LH-LNGITRALIRAVKELEE--DAIENGEAL 537
+ A LL+ MR +G LH N + L+R V L++ D N E L
Sbjct: 383 GNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLR-VNRLDDALDLFNNMETL 433
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 125/305 (40%), Gaps = 4/305 (1%)
Query: 181 WDIVKEIGEKEKGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI 239
W++ E+ K G V N L+ K GK FE++ + C N T+ I
Sbjct: 810 WNLFTEM--KNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIII 867
Query: 240 EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
L + D A + ++ P G ++ K G+ +EA ++ +
Sbjct: 868 ANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCR 927
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P ++ LI+ + + V A ++ E + +K ++S++ LC V A
Sbjct: 928 PNNAIYNILINGFGKTGD-VNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALH 986
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
K+ G + +N +I ++ + A+ + M+SRG+ PD++TY L+
Sbjct: 987 YFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLG 1046
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
G +E+A ++ E + + TY+ LIRGY D A + M G PN
Sbjct: 1047 VAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTG 1106
Query: 480 EYNKL 484
+ +L
Sbjct: 1107 TFAQL 1111
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 131/315 (41%), Gaps = 15/315 (4%)
Query: 205 ALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL 264
LF + G + F F K + G N +Y I L + + A + +M+ G
Sbjct: 168 GLFIRGGLRQTPF-AFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLK 226
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKK---MYPPQSVVAFLISSLCQE---DET 318
P + ++ GK ++ V +L E + + P I L + DE
Sbjct: 227 PSLKTFSALM---VATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEA 283
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
++ M DD G + ++ +I +LC + A L KM + P + +
Sbjct: 284 CRIMKRMEDDGCGPD----VVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYIT 339
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
++ +S GD+ E M + G PDV T+T L++ G ++EA +L+ +K
Sbjct: 340 MLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQG 399
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
+ TY+TLI G ++ D AL L N M+ +GV P Y I K+ A
Sbjct: 400 VLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYG-KSGRSDKA 458
Query: 499 EKLLEDMRLKGLHLN 513
+ E M+++G+ N
Sbjct: 459 LETFEKMKIRGIAPN 473
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 141/284 (49%), Gaps = 4/284 (1%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
TY +E L + K D A + E+M G PD+ ++S C+ K +EA +++
Sbjct: 11 TYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKM 70
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
++++ P LI+ LC+ ++ A ++ + +G+ ++++I C+ KD
Sbjct: 71 VKQRINPNVVTYNTLINGLCKAWR-IETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKD 129
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
+ AK + KM+ P + ++I SK+G + A E+L M +G+ P+V TY+
Sbjct: 130 LVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSC 189
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
L+ G+ +++EA ++L + + VTY+ L+ C+ ++ + A KL M
Sbjct: 190 LIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRR 249
Query: 474 VQPNVDEYNKLIQSLC-LKALDWRTAEKLLEDMRLKGLHLNGIT 516
P V YN L+++LC K LD A +L +M KG + IT
Sbjct: 250 CHPTVVTYNTLLRALCHHKQLDG--AHRLYAEMIAKGCPPDAIT 291
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 123/260 (47%), Gaps = 3/260 (1%)
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALD 324
PD+ G I+ CK + +A + + P + F++S LCQE E V+ A
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQE-EKVEEARL 65
Query: 325 MLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
+ + + + ++++I LC+ + A L +M +G P +N++I +
Sbjct: 66 LFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFC 125
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV 444
K D+ A ++ M P+V TYT L+ G + G+++ A E+L+ K +
Sbjct: 126 KKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVA 185
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLED 504
TY LI G+CK+ D A KLL +M G+ P V YN L+ SLC +A A KL
Sbjct: 186 TYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLC-RADKLEDAFKLFRG 244
Query: 505 MRLKGLHLNGIT-RALIRAV 523
M + H +T L+RA+
Sbjct: 245 MAQRRCHPTVVTYNTLLRAL 264
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 119/249 (47%), Gaps = 13/249 (5%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEI-LNELIALFSKLGKGKAAFEVF 220
+ L+ +C + + Y L+ KE+ K G + E+ N LI F K AA +VF
Sbjct: 83 NTLINGLCKAWRIETAYELF---KEMAGK--GYVPTEVSYNTLIDGFCKKKDLVAAKDVF 137
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+K CV N TY I+ LS+ A V + M++ G P+ +I FCK
Sbjct: 138 DKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKV 197
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY---A 337
+ EAH + + + P L++SLC+ D KL D F G A++
Sbjct: 198 RRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRAD---KLE-DAFKLFRGMAQRRCHPT 253
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+ +++++R+LC K + GA L ++MI++G PP ++++ ++AG + A E+++
Sbjct: 254 VVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELME 313
Query: 398 LMRSRGLKP 406
M+ P
Sbjct: 314 KMKLTKRNP 322
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 4/220 (1%)
Query: 299 YPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHG 356
Y P + + ++ LC+ + + AL +++ + K ++ V+ LC+ + V
Sbjct: 4 YAPPDALTYGPIVERLCKT-KRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEE 62
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A+ L KM+ + P +N++I+ KA + A E+ K M +G P +Y L+
Sbjct: 63 ARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLID 122
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
G+ + A ++ ++ +++ + VTY TLI G K + A ++L+ M GV P
Sbjct: 123 GFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTP 182
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
NV Y+ LI C K A KLLE M +G+ +T
Sbjct: 183 NVATYSCLIDGFC-KVRRVDEAHKLLEQMVTQGIAPTVVT 221
Score = 45.4 bits (106), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+R PD TY ++ ++++A + E + Y+ ++ G C+ E+ +
Sbjct: 2 ARYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVE 61
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
A L +M + PNV YN LI LC KA TA +L ++M KG
Sbjct: 62 EARLLFEKMVKQRINPNVVTYNTLINGLC-KAWRIETAYELFKEMAGKG 109
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 154/330 (46%), Gaps = 12/330 (3%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVA-NQETYYFTIEALSRRKIFDWAWSVCEK 257
+L L+ K GK A+ VF K C+ + E Y I+ L + ++ + AW + K
Sbjct: 754 VLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYK 813
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP---PQSVVAFLISSLCQ 314
M G PD + K GK KE +Y + P ++V F +
Sbjct: 814 MKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNS 873
Query: 315 EDETVKLALDMLD-DFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
D+ + L D++ DFS Y +I L ++ + AK +M+ G P
Sbjct: 874 LDKAIDLYYDLMSGDFSPTPWTYG-----PLIDGLLKLGRLEEAKQFFEEMLDYGCMPNC 928
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
++N +++ + K GD+ A E+ + M G++PD+ +Y+ ++ G++++A E
Sbjct: 929 PLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEE 988
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
K + V Y+ +I G + + + AL L +EM++ G+ P++ YN LI +L + +
Sbjct: 989 LKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGM 1048
Query: 494 DWRTAEKLLEDMRLKGLHLNGIT-RALIRA 522
A K+ E+++LKGL N T ALIR
Sbjct: 1049 -VEEAGKMYEELQLKGLEPNVFTYNALIRG 1077
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 129/303 (42%), Gaps = 2/303 (0%)
Query: 204 IALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGS 263
I + + GK A+ + + D GC + TY I+AL + A + KM +
Sbjct: 269 IRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSH 328
Query: 264 LPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLAL 323
PD ++ F G ++ P LI +LC+ + V A
Sbjct: 329 KPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGK-VDEAF 387
Query: 324 DMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAY 383
LD + + ++++I L R+ + A L + M S G + I Y
Sbjct: 388 GTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYY 447
Query: 384 SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
K+G+ A++ + M++ G+ P++ + A G++EEA E N KK
Sbjct: 448 GKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDA 507
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
+TY+ L+R Y K D A+KLL+EM++ G P V N LI +L KA A K+ +
Sbjct: 508 ITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTL-YKADRVDEAWKMFQ 566
Query: 504 DMR 506
M+
Sbjct: 567 RMK 569
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 154/381 (40%), Gaps = 14/381 (3%)
Query: 150 VCFFKWVTSGVVDALLKAICSSVGKKEVYAL----------WDIVKEIGEKEKGVLTVEI 199
VC F +S V + + S++ +EVY + + + E + + T E
Sbjct: 65 VCGFVIRSSFDVVVVKRKPESTMSSEEVYRVLKSISDPNQAFSFFNSVAEMPRVIHTTET 124
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N ++ + + + VFN + TY + L R A EKM
Sbjct: 125 CNYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMR 184
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G + + +I K G +EA VY + + P + L+ +L + + +
Sbjct: 185 KVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRD-I 243
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
+ + +L + + I F+ IR L R + A +L +M G P + +
Sbjct: 244 ETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVL 303
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I A AG + A E+ M++ KPD TY L+ +++ G ++ E +E + +
Sbjct: 304 IDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGY 363
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC-LKALDWRTA 498
VT+ LI CK+ + D A L+ MK GV PN+ YN LI L L LD A
Sbjct: 364 LPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLD--EA 421
Query: 499 EKLLEDMRLKGLHLNGITRAL 519
+L M GL T L
Sbjct: 422 LELFNSMESLGLETTAYTYIL 442
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 122/290 (42%), Gaps = 9/290 (3%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K+GK AF + G N TY I L R D A + M G
Sbjct: 373 LIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLG 432
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+ I ++ K G++ +A + + + P + SL ++
Sbjct: 433 LETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGR----- 487
Query: 323 LDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
L+ +F +K + P ++ ++R + V A LLS+M G P + NS
Sbjct: 488 LEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINS 547
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I KA + A +M + M+ L P V TY L++G G+++EA + +
Sbjct: 548 LIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADD 607
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ ++++TL+ CK E D ALK+L M ++ P+V YN +I L
Sbjct: 608 CPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGL 657
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 121/284 (42%), Gaps = 1/284 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N + K GK K F+++ + GC N T+ I L + D A + ++
Sbjct: 827 NLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMS 886
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
P G +I K G+ +EA + + P + L++ ++ + V+
Sbjct: 887 GDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGD-VE 945
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A ++ E + +K +S ++ LC + V A ++ G P +N +I
Sbjct: 946 TACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMI 1005
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ ++ + A+ + MR+RG+ PD+YTY L+ G +EEA ++ E +
Sbjct: 1006 NGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLE 1065
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
+ TY+ LIRG+ D A + +M G +PN + +L
Sbjct: 1066 PNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 119/322 (36%), Gaps = 36/322 (11%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI GK A E+F K ++ TY ++ S D +M G
Sbjct: 303 LIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADG 362
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED------ 316
LPD +I CK GK EA + +++ + P LI L + +
Sbjct: 363 YLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEAL 422
Query: 317 -----------ETVKLALDMLDDF---SGEARKYAIKPF---------------SSVIRS 347
ET + D+ SGE+ K AIK F ++ + S
Sbjct: 423 ELFNSMESLGLETTAYTYILFIDYYGKSGESGK-AIKTFEKMKTNGIVPNIVACNASLYS 481
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
L + AK + + G P +N ++ Y KAG + A+++L M G P+
Sbjct: 482 LAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPE 541
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
V L+ +++EA ++ K+ + VTY+TL+ G K A L
Sbjct: 542 VVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFK 601
Query: 468 EMKDVGVQPNVDEYNKLIQSLC 489
M PN +N L+ LC
Sbjct: 602 GMIADDCPPNTISFNTLLDCLC 623
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 111/268 (41%), Gaps = 6/268 (2%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
I + K G+ A + F K G V N ++ +L+ + + A + + G
Sbjct: 443 FIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCG 502
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD+ ++ + K G+ +A + + E P ++ LI +L + D V A
Sbjct: 503 LAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADR-VDEA 561
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
M + +++++ L + V A L MI++ PP FN+++
Sbjct: 562 WKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDC 621
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
K G++ A++ML M PDV TY ++ G ++ A + ++ KK +
Sbjct: 622 LCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKK---VIY 678
Query: 443 P--VTYHTLIRGYCKLEEFDCALKLLNE 468
P VT TL+ G K + A ++ E
Sbjct: 679 PDYVTLCTLLPGVIKDGRIEDAFRVAKE 706
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 150/319 (47%), Gaps = 3/319 (0%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
+ N L+ F +LG+ +A +VF++ T+ I + R + D + ++
Sbjct: 187 RLFNVLMRDFVRLGELVSARKVFDEM-RRSVQPTVVTFNTLISGMCRARDLDAVDGLYKE 245
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M + G PD G +I FC+ G+ + A ++ R+ + P V LI + C+E
Sbjct: 246 MSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEG- 304
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
V +D+ D + +++++ LCR +++ A++++ +M + G P +
Sbjct: 305 NVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYT 364
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
++I K G + AM++ + M + + D TYT L+SG + G+ +A +L E +
Sbjct: 365 TLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEA 424
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
TY +I +C+ + KLL EM++ G +P V YN ++ LC K +
Sbjct: 425 ALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLC-KLGQMKN 483
Query: 498 AEKLLEDMRLKGLHLNGIT 516
A+ LL M G+ + IT
Sbjct: 484 ADMLLHAMLNIGVSPDDIT 502
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 112/268 (41%), Gaps = 5/268 (1%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+K C + + +++ +++ G V + LI K G A +++
Sbjct: 260 ALIKGFCRTGRMENAVKMFNEMRDTGVNPNAV----VFTTLIDAHCKEGNVNAGMDLYQD 315
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + + Y + L R + A S+ E+M G PD +I CK GK
Sbjct: 316 MRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGK 375
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
A + EK++ + LIS L + V A +L + A + ++
Sbjct: 376 LDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVD-AERVLREMMEAALEPDNTTYT 434
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
VI + CR DV LL +M ++G PG +N +++ K G M A +L M +
Sbjct: 435 MVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNI 494
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEI 430
G+ PD TY L+ G G++ + E+
Sbjct: 495 GVSPDDITYNILLDGQCKHGKVANSEEL 522
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 114/261 (43%), Gaps = 10/261 (3%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLT-VEILNELIALFSKLGKGKAAFE 218
V L+ A C + V A D+ +++ + +GV+ + N L+ + KAA
Sbjct: 292 VFTTLIDAHCK---EGNVNAGMDLYQDM--RVRGVMPDLVAYNALVNGLCRARNLKAAES 346
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+ + + G ++ TY I+ + D A + +KM E D +IS
Sbjct: 347 IVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLS 406
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
K G+ +A V E + P + +I + C++ + VK +L + + +K +
Sbjct: 407 KAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGD-VKTGFKLLKEMQNKGKKPGV 465
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
++ ++ LC++ + A LL M++ G P + +N ++ K G + + E L
Sbjct: 466 VTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEE---L 522
Query: 399 MRSRGLKPDVYTYTGLMSGYA 419
S+G+ PD YT L+S A
Sbjct: 523 ESSKGMVPDFAVYTSLISELA 543
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 36/179 (20%)
Query: 371 PGNA--VFNSVISAYSKAGDMTPAMEMLKLMRSRGLK----------------PDVYT-- 410
PG+ + + + +AY+ G + A ++ L RG+ P+ YT
Sbjct: 115 PGDPAPLVSELAAAYADEGLLPDACSLVLLALRRGISLPAPVCSGLMSRLPSTPEAYTFY 174
Query: 411 --------------YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
+ LM + G++ A ++ +E +++ + + VT++TLI G C+
Sbjct: 175 LQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMRRS-VQPTVVTFNTLISGMCRA 233
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
+ D L EM DVGV+P+V Y LI+ C + A K+ +MR G++ N +
Sbjct: 234 RDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFC-RTGRMENAVKMFNEMRDTGVNPNAV 291
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 150/339 (44%), Gaps = 12/339 (3%)
Query: 181 WDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIE 240
WD+ E+ K VL N L+ ++ G E+ K + N T+ I
Sbjct: 290 WDLFTEM-IKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILIN 348
Query: 241 ALSRRKIFDWAWSVCEKMI---ETGSL-----PDSEKVGKIISWFCKGGKAKEAHVVYTL 292
+ + + D A V EKM E+G + PD +I CK G+ +E +
Sbjct: 349 HMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMER 408
Query: 293 AREKKMYPPQSVV-AFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRM 351
R +K P ++ LI C+ E K ++ D+ + E + ++++ +CR
Sbjct: 409 MRSQKGCAPDTITYNCLIDGFCKAGEIEK-GKELFDEMNKEGVAPNVVTVNTLVGGMCRT 467
Query: 352 KDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTY 411
V A + G + ++I+A+ + AME+ M G PD Y
Sbjct: 468 GRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVY 527
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
L+SG++ G+M +A +L E KK R V Y+TLI G+C+ +F ++L EM++
Sbjct: 528 YTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEE 587
Query: 472 VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
G++P+ YN LI + K D + A+K++ M G+
Sbjct: 588 AGLKPDTITYNTLI-AYASKNGDLKFAQKVMRKMIKAGV 625
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 124/273 (45%), Gaps = 10/273 (3%)
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
KFG++G + + I L R + + W + +MI+ G++ +S +++ + G
Sbjct: 260 KFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREG 319
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR----KYA 337
+ + E + P LI+ +C+ V AL++L+ SG +
Sbjct: 320 NFNRMNELMEKMVEMDIQPNVVTFGILINHMCKF-RRVDDALEVLEKMSGGKESGGISVS 378
Query: 338 IKP----FSSVIRSLCRMKDVHGAKTLLSKMISE-GPPPGNAVFNSVISAYSKAGDMTPA 392
++P ++++I LC++ L+ +M S+ G P +N +I + KAG++
Sbjct: 379 VEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKG 438
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
E+ M G+ P+V T L+ G G++ A EA++ + VTY LI
Sbjct: 439 KELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINA 498
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
+C + F+ A++L NEM G P+ Y LI
Sbjct: 499 FCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLI 531
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 157/356 (44%), Gaps = 11/356 (3%)
Query: 179 ALWDIVKEIGEKEKGVLTVE------ILNELIALFSKLGKGKAAFEVFNKF-GDYGCVAN 231
AL + K G KE G ++V I N LI K+G+ + + + GC +
Sbjct: 359 ALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPD 418
Query: 232 QETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYT 291
TY I+ + + + ++M + G P+ V ++ C+ G+ A +
Sbjct: 419 TITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFV 478
Query: 292 LAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRM 351
A+ + M LI++ C + K A+++ ++ + ++I +
Sbjct: 479 EAQRRGMKGDAVTYTALINAFCNVNNFEK-AMELFNEMLKSGCSPDAIVYYTLISGFSQA 537
Query: 352 KDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTY 411
+ A +L+++ G P +N++I + + EMLK M GLKPD TY
Sbjct: 538 GRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITY 597
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
L++ + G ++ A +++ + K + TY +I YC + A+++ +MK
Sbjct: 598 NTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKA 657
Query: 472 VG-VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAVKE 525
V PN YN LI SLC K ++A L+EDM++ G+ N T A+ + +++
Sbjct: 658 ASKVPPNTVIYNILINSLC-KNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRD 712
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 150/356 (42%), Gaps = 27/356 (7%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEIL-NELIALFSKLG---KGKA 215
+ + L+ +C ++E L + ++ +KG I N LI F K G KGK
Sbjct: 385 IYNTLIDGLCKVGRQQEGLGLMERMRS----QKGCAPDTITYNCLIDGFCKAGEIEKGKE 440
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
F+ NK G N T + + R A + + G D+ +I+
Sbjct: 441 LFDEMNK---EGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALIN 497
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
FC ++A ++ + P V LIS Q + + E +K
Sbjct: 498 AFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVL-----AELKK 552
Query: 336 YAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
I+P ++++I CR H +L +M G P +N++I+ SK GD+
Sbjct: 553 LGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKF 612
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTL 449
A ++++ M G+ P V TY +++ Y G EA EI + K S++ P V Y+ L
Sbjct: 613 AQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKA-ASKVPPNTVIYNIL 671
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
I CK + A+ L+ +MK GV PN YN + + L D + EK+ E M
Sbjct: 672 INSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGL----RDEKDLEKVFEFM 723
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 18/216 (8%)
Query: 312 LCQEDETVKLALDMLDDFSGEARKYAIKPF--SSVIRSLCRMKDVHGAKTLLSKMISEGP 369
L EDE V L L GE I F +I LCR + + L ++MI G
Sbjct: 248 LLSEDEIVNLVLKF-----GE-HGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGA 301
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
+A NS+++ ++ G+ E+++ M ++P+V T+ L++ ++++A E
Sbjct: 302 VLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALE 361
Query: 430 IL------NEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDV-GVQPNVDE 480
+L E+ + P V Y+TLI G CK+ L L+ M+ G P+
Sbjct: 362 VLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTIT 421
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
YN LI C KA + ++L ++M +G+ N +T
Sbjct: 422 YNCLIDGFC-KAGEIEKGKELFDEMNKEGVAPNVVT 456
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 99/233 (42%), Gaps = 6/233 (2%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F + + A E+FN+ GC + YY I S+ A V ++ + G
Sbjct: 495 LINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLG 554
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE--KKMYPPQSVVAFLISSLCQEDETVK 320
PD+ +I FC+ K H V+ + +E + P ++ + + ++ +K
Sbjct: 555 IRPDTVCYNTLIGGFCRTNKF---HRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLK 611
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP-PPGNAVFNSV 379
A ++ + + +VI + C + + A + M + PP ++N +
Sbjct: 612 FAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNIL 671
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
I++ K + A+ +++ M+ G+ P+ TY + G + +E+ E ++
Sbjct: 672 INSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMD 724
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 146/323 (45%), Gaps = 11/323 (3%)
Query: 191 EKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDW 250
E V T IL + ++ + K +A +FN+ V + Y I A R
Sbjct: 244 EATVGTYTILVDSLSTARDISKVEA---LFNEMKANNVVGDVYLYTAVINAYCRAGNMRR 300
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A V ++ + G P+ G +I+ FCK G+ + A ++ + + + Q + +I
Sbjct: 301 AAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMID 360
Query: 311 SLCQE---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
C++ D+ +K+ M + E Y ++++ LCR+ + AKTLL MI
Sbjct: 361 GYCRKGMVDDALKIKAAM-EKMGVELDIYT---YNTLACGLCRVNRLDEAKTLLHIMIEM 416
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P + ++IS + K GDM A + + M +G P V TY ++ GY G + EA
Sbjct: 417 GVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREA 476
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
E +K TY +L+ G+C + D ALKL EMK G +PNV Y LI
Sbjct: 477 ERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISG 536
Query: 488 LCLKALDWRTAEKLLEDMRLKGL 510
L K A +L +DM GL
Sbjct: 537 LA-KEGRSEAAFQLYDDMLKAGL 558
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 133/272 (48%), Gaps = 26/272 (9%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC-----------QEDETVKL 321
++ CK G+ +A R P V +++LC ++D V+
Sbjct: 183 VVDGLCKSGRVDDAR------RLLDDMPRHGVS---LNALCYNSLLDCYVRQKDDGRVQE 233
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
L+++++ EA + ++ ++ SL +D+ + L ++M + ++ +VI+
Sbjct: 234 ILEIMENEGIEA---TVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVIN 290
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
AY +AG+M A ++L G++P+ TY L++G+ GQME A +L + + L
Sbjct: 291 AYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGL 350
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC-LKALDWRTAEK 500
+ + ++T+I GYC+ D ALK+ M+ +GV+ ++ YN L LC + LD A+
Sbjct: 351 NQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDE--AKT 408
Query: 501 LLEDMRLKGLHLNGITRALIRAVKELEEDAIE 532
LL M G+ N +T + ++ + D +E
Sbjct: 409 LLHIMIEMGVVPNYVTYTTLISIHCKDGDMVE 440
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 1/174 (0%)
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
S V+ LC+ V A+ LL M G +NS++ Y + D E+L++M +
Sbjct: 181 SVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMEN 240
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G++ V TYT L+ + + + + NE K N+ Y +I YC+
Sbjct: 241 EGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRR 300
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
A K+L+E GV+PN Y LI C K AE LL DM+ +G+ LN I
Sbjct: 301 AAKVLDECVGNGVEPNERTYGVLINGFC-KIGQMEAAEMLLADMQGQGVGLNQI 353
>gi|225430029|ref|XP_002281569.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Vitis vinifera]
Length = 635
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 152/341 (44%), Gaps = 6/341 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+A++ A S +E + +KE G K T N LI + G+ + + ++
Sbjct: 146 NAVINAFSESGNMQEAMKYFWKMKESGSKP----TTSTFNTLIKGYGIAGEPEESQKLLE 201
Query: 222 KFG-DYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
D N TY + A +K AW+V KM+ +G PD+ I + + +
Sbjct: 202 LMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQN 261
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
G+A +A + + + P + +I C+E + +K AL + + +
Sbjct: 262 GEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGK-IKEALQFVYRMKDLGLQPNLVV 320
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F+S+I+ D G +L+ M G P F+++++A+S AG M E+ M
Sbjct: 321 FNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMV 380
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
++PD + Y+ L GY G+ E+A EILN K+ + V + T+I G+C +
Sbjct: 381 KARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRME 440
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
A+K+ +M + G+ PN+ + LI W++ E L
Sbjct: 441 YAIKIFEKMCECGIAPNLKTFETLIWGYGEARQPWKSEEVL 481
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 158/333 (47%), Gaps = 12/333 (3%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
TV +L+ + + G+ + + + + G + TY + AL+ +K FD S+
Sbjct: 71 TVRSRTKLMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSII 130
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS--SLC 313
++ E G PDS +I+ F + G +EA + +E P S LI +
Sbjct: 131 SQVEENGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIA 190
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
E E + L+++ E + ++ ++ ++R+ C K++ A ++ KM++ G P
Sbjct: 191 GEPEESQKLLELMSQ--DENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDA 248
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+N++ +AY++ G+ + A ++ M++ ++P+ T ++ GY G+++EA + +
Sbjct: 249 VTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYR 308
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL----- 488
K + + V +++LI+G+ + D ++L M++ GV+P+V ++ ++ +
Sbjct: 309 MKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGF 368
Query: 489 ---CLKALDWRTAEKLLEDMRLKGLHLNGITRA 518
C + D ++ D + + G RA
Sbjct: 369 MDKCREIFDDMVKARIQPDAHVYSILAKGYVRA 401
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 100/197 (50%), Gaps = 2/197 (1%)
Query: 325 MLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
+LD K ++ +++++ +L K +++S++ G P + FN+VI+A+S
Sbjct: 94 ILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFFNAVINAFS 153
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS-RLSP 443
++G+M AM+ M+ G KP T+ L+ GY G+ EE+ ++L ++ + R +
Sbjct: 154 ESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRPNL 213
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
TY+ L+R +C + A ++ +M G+QP+ YN + + + AE ++
Sbjct: 214 RTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNG-EASQAEGIIL 272
Query: 504 DMRLKGLHLNGITRALI 520
+M+ + N T +I
Sbjct: 273 EMQNSNVQPNERTCCII 289
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 89/180 (49%), Gaps = 8/180 (4%)
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
+++L +I G P + ++++A + ++ + G++PD + +++
Sbjct: 92 QSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFFNAVINA 151
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM-KDVGVQP 476
++ G M+EA + + K++ S+ + T++TLI+GY E + + KLL M +D V+P
Sbjct: 152 FSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRP 211
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIENGEA 536
N+ YN L+++ C K + A ++ M GL + +T I +NGEA
Sbjct: 212 NLRTYNVLVRAWCNKK-NIMKAWNVVYKMVASGLQPDAVTYNTIATA------YAQNGEA 264
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 158/343 (46%), Gaps = 10/343 (2%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N ++ + + G K A +VF + + G V + T+ I++ R K A + M+
Sbjct: 115 NAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVS 174
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G ++ +++ F + EA+ ++ ++P S L+ +LC++ E V+
Sbjct: 175 QGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGE-VQ 233
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
+ +L+ + + F+ I+ LCR + GA ++L +I EG P +N++I
Sbjct: 234 ESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLI 293
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
K ++ A + L + + GL+PD +TY L+ GY G ++ A +IL A
Sbjct: 294 CGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFV 353
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
TY +LI G C+ +E D AL L N G++P V YN LI+ LC + L + +
Sbjct: 354 PDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQM 413
Query: 501 LLE--------DMRLKGLHLNGITR-ALIRAVKELEEDAIENG 534
+ E D+ L +NG+ + + L DAI G
Sbjct: 414 MNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKG 456
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 131/294 (44%), Gaps = 4/294 (1%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
TY I+ + + A + + I G +PD +I+ C+ + A ++ A
Sbjct: 323 TYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAA 382
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
K + P + LI LCQE ++ AL M+++ S I ++ VI LC+M
Sbjct: 383 LGKGLKPTVILYNMLIKGLCQEGLILQ-ALQMMNEMSENGCSSDIWTYNLVINGLCKMGC 441
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
V A L++ I++G P FN++I Y K M +++L M S G+ PDV TY
Sbjct: 442 VSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNS 501
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
+++G + + E+ E + + +TY+ L CK + + AL L++E+ + G
Sbjct: 502 VLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKG 561
Query: 474 VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM--RLKGLHLNGITRALIRAVKE 525
+ P+ + +I D + A +L M + K H +I A E
Sbjct: 562 ITPDTVSFATIISGFANNG-DLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAE 614
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/381 (20%), Positives = 161/381 (42%), Gaps = 18/381 (4%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L+ +C + AL++ G K TV + N LI + G A ++ N+
Sbjct: 361 SLINGLCQNDEIDRALALFNAALGKGLKP----TVILYNMLIKGLCQEGLILQALQMMNE 416
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ GC ++ TY I L + A ++ I G +PD +I +CK K
Sbjct: 417 MSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLK 476
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK--- 339
+ + + P +++ L + VK D+++ F K +
Sbjct: 477 METTIQILNKMWSHGVTPDVITYNSVLNGL---SKAVKNE-DLMETFETMVEKGCVPNKI 532
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
++ + SLC+ V+ A L+ +++++G P F ++IS ++ GD+ A ++ + M
Sbjct: 533 TYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRM 592
Query: 400 RSR-GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
+ + TY +++ +A + ++ E TY +I G+C
Sbjct: 593 GEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGN 652
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRA 518
D K L EM + G P++ + ++I LC++ R E + D+ +H NGI
Sbjct: 653 TDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQ---HRVHEAV--DIIHFMVH-NGIVPE 706
Query: 519 LIRAVKELEEDAIENGEALVE 539
++ ++ E ++ + + +VE
Sbjct: 707 VVNSISEADKKVVAAPKIVVE 727
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 87/176 (49%), Gaps = 1/176 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+ ++S R V A + +M P +N++++ ++G A ++ M+
Sbjct: 79 YIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMK 138
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+ G+ PDVYT+T + + + A +LN +L+ V Y T++ G+ +
Sbjct: 139 NVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRV 198
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A +L N+M +G+ P+V +NKL+ +LC K + + +E+LL + KG+ N T
Sbjct: 199 EAYELFNDMLRIGIFPDVSTFNKLLHTLCKKG-EVQESERLLNKVLKKGMCSNLFT 253
>gi|296081889|emb|CBI20894.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 152/341 (44%), Gaps = 6/341 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+A++ A S +E + +KE G K T N LI + G+ + + ++
Sbjct: 146 NAVINAFSESGNMQEAMKYFWKMKESGSKP----TTSTFNTLIKGYGIAGEPEESQKLLE 201
Query: 222 KFG-DYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
D N TY + A +K AW+V KM+ +G PD+ I + + +
Sbjct: 202 LMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQN 261
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
G+A +A + + + P + +I C+E + +K AL + + +
Sbjct: 262 GEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGK-IKEALQFVYRMKDLGLQPNLVV 320
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F+S+I+ D G +L+ M G P F+++++A+S AG M E+ M
Sbjct: 321 FNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMV 380
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
++PD + Y+ L GY G+ E+A EILN K+ + V + T+I G+C +
Sbjct: 381 KARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRME 440
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
A+K+ +M + G+ PN+ + LI W++ E L
Sbjct: 441 YAIKIFEKMCECGIAPNLKTFETLIWGYGEARQPWKSEEVL 481
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 158/333 (47%), Gaps = 12/333 (3%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
TV +L+ + + G+ + + + + G + TY + AL+ +K FD S+
Sbjct: 71 TVRSRTKLMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSII 130
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS--SLC 313
++ E G PDS +I+ F + G +EA + +E P S LI +
Sbjct: 131 SQVEENGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIA 190
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
E E + L+++ E + ++ ++ ++R+ C K++ A ++ KM++ G P
Sbjct: 191 GEPEESQKLLELMSQ--DENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDA 248
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+N++ +AY++ G+ + A ++ M++ ++P+ T ++ GY G+++EA + +
Sbjct: 249 VTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYR 308
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL----- 488
K + + V +++LI+G+ + D ++L M++ GV+P+V ++ ++ +
Sbjct: 309 MKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGF 368
Query: 489 ---CLKALDWRTAEKLLEDMRLKGLHLNGITRA 518
C + D ++ D + + G RA
Sbjct: 369 MDKCREIFDDMVKARIQPDAHVYSILAKGYVRA 401
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 100/197 (50%), Gaps = 2/197 (1%)
Query: 325 MLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
+LD K ++ +++++ +L K +++S++ G P + FN+VI+A+S
Sbjct: 94 ILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFFNAVINAFS 153
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS-RLSP 443
++G+M AM+ M+ G KP T+ L+ GY G+ EE+ ++L ++ + R +
Sbjct: 154 ESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRPNL 213
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
TY+ L+R +C + A ++ +M G+QP+ YN + + + AE ++
Sbjct: 214 RTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNG-EASQAEGIIL 272
Query: 504 DMRLKGLHLNGITRALI 520
+M+ + N T +I
Sbjct: 273 EMQNSNVQPNERTCCII 289
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 89/180 (49%), Gaps = 8/180 (4%)
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
+++L +I G P + ++++A + ++ + G++PD + +++
Sbjct: 92 QSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFFNAVINA 151
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM-KDVGVQP 476
++ G M+EA + + K++ S+ + T++TLI+GY E + + KLL M +D V+P
Sbjct: 152 FSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRP 211
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIENGEA 536
N+ YN L+++ C K + A ++ M GL + +T I +NGEA
Sbjct: 212 NLRTYNVLVRAWCNKK-NIMKAWNVVYKMVASGLQPDAVTYNTIATA------YAQNGEA 264
>gi|357140210|ref|XP_003571663.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Brachypodium distachyon]
Length = 841
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 174/393 (44%), Gaps = 70/393 (17%)
Query: 129 DLHEDFVLKVLETPLVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIG 188
+LHE F ++ + + +VC W G +D K +CS++
Sbjct: 375 ELHEMFGSRISADSV---DMVVCRLCW--DGRLDDAWKLVCSAI---------------- 413
Query: 189 EKEKGV-LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKI 247
E+GV ++V N L+A +SK G + A EV++ G V + T+ + I L +
Sbjct: 414 --EQGVPVSVAGFNALVAAYSKEGFDEQALEVYSVMNKIGLVPSSPTFNYLIMGLCNQGR 471
Query: 248 FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF 307
D A + E MI CKG + +Y + +
Sbjct: 472 LDDAQLLLEHMI------------------CKGYCVGTSFTIYMDSYFRS---------- 503
Query: 308 LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
V+ AL DD + FS+ I LCR+ V+ A +M
Sbjct: 504 ---------GNVEGALKCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNEAYQAFVEMTGR 554
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P N +NS+ISA+ + G ++ A+++ K MR GL PDV+T L+ G+ G+++
Sbjct: 555 GFVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSNILIDGFCKEGRLD-- 612
Query: 428 CEILNEAKKN--HSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
++N+ + +S L+P VTY+T+I YC ++ A+ +N+M G +P++ YN
Sbjct: 613 --MMNKRFLDMYNSGLTPDVVTYNTIINAYCGAQDMSSAMIFMNKMLADGCEPDIFTYNI 670
Query: 484 LIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ SLC L R A K+L+++ G N +T
Sbjct: 671 WMHSLCNNHLLNR-AVKMLDELVAMGCMPNSVT 702
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 143/331 (43%), Gaps = 19/331 (5%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSR-------RKIFDWAWS 253
N LI +S G+ AF++ ++ + GC TY + L R++FD
Sbjct: 249 NILIKGYSVFGQAGDAFQLLDEMRESGCQPTVVTYNILVNVLCHDGNMVDARRLFD---- 304
Query: 254 VCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC 313
+M++ G ++ ++ + K G+ EA+ + + + P L +
Sbjct: 305 ---EMVKVGIEANTITFNVLVDGYAKAGRMDEAYAACREMKARGLVPDCCTFNILSAGAY 361
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
+ + V+LA + + + V+ LC + A L+ I +G P
Sbjct: 362 KFGKAVQLAHGQQELHEMFGSRISADSVDMVVCRLCWDGRLDDAWKLVCSAIEQGVPVSV 421
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
A FN++++AYSK G A+E+ +M GL P T+ L+ G N G++++A ++L E
Sbjct: 422 AGFNALVAAYSKEGFDEQALEVYSVMNKIGLVPSSPTFNYLIMGLCNQGRLDDA-QLLLE 480
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
++ + Y + + ALK ++M VGVQP+ ++ I LC L
Sbjct: 481 HMICKGYCVGTSFTIYMDSYFRSGNVEGALKCWDDMVKVGVQPDFIAFSAYISGLC--RL 538
Query: 494 DW-RTAEKLLEDMRLKGLHLNGIT-RALIRA 522
D A + +M +G N IT +LI A
Sbjct: 539 DHVNEAYQAFVEMTGRGFVPNNITYNSLISA 569
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 1/208 (0%)
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
F G A EA VV R P S +A L+ L + E V+ A + + + +
Sbjct: 150 FLAAGMASEALVVLAHIRCGGNTPSLSAIAALLRLLFRAGE-VRPAWKVFVEMTARGPRP 208
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
++ F+++I C VH LL M P +N +I YS G A ++L
Sbjct: 209 SLAIFNAMILGFCHRGLVHIGLGLLGVMWRFNVIPDACSYNILIKGYSVFGQAGDAFQLL 268
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
MR G +P V TY L++ + G M +A + +E K + +T++ L+ GY K
Sbjct: 269 DEMRESGCQPTVVTYNILVNVLCHDGNMVDARRLFDEMVKVGIEANTITFNVLVDGYAKA 328
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKL 484
D A EMK G+ P+ +N L
Sbjct: 329 GRMDEAYAACREMKARGLVPDCCTFNIL 356
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 99/205 (48%), Gaps = 7/205 (3%)
Query: 306 AFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI 365
AFL + + E AL +L ++ ++++R L R +V A + +M
Sbjct: 149 AFLAAGMASE------ALVVLAHIRCGGNTPSLSAIAALLRLLFRAGEVRPAWKVFVEMT 202
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
+ GP P A+FN++I + G + + +L +M + PD +Y L+ GY+ GQ
Sbjct: 203 ARGPRPSLAIFNAMILGFCHRGLVHIGLGLLGVMWRFNVIPDACSYNILIKGYSVFGQAG 262
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
+A ++L+E +++ + + VTY+ L+ C A +L +EM VG++ N +N L+
Sbjct: 263 DAFQLLDEMRESGCQPTVVTYNILVNVLCHDGNMVDARRLFDEMVKVGIEANTITFNVLV 322
Query: 486 QSLCLKALDWRTAEKLLEDMRLKGL 510
KA A +M+ +GL
Sbjct: 323 DGYA-KAGRMDEAYAACREMKARGL 346
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 147/354 (41%), Gaps = 50/354 (14%)
Query: 176 EVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETY 235
+ + L D ++E G + TV N L+ + G A +F++ G AN T+
Sbjct: 263 DAFQLLDEMRESGCQP----TVVTYNILVNVLCHDGNMVDARRLFDEMVKVGIEANTITF 318
Query: 236 YFTIEALSRRKIFDWAWSVCEKMIETGSLPD----------------------------- 266
++ ++ D A++ C +M G +PD
Sbjct: 319 NVLVDGYAKAGRMDEAYAACREMKARGLVPDCCTFNILSAGAYKFGKAVQLAHGQQELHE 378
Query: 267 -------SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQE-- 315
++ V ++ C G+ +A + A E+ + P SV F L+++ +E
Sbjct: 379 MFGSRISADSVDMVVCRLCWDGRLDDAWKLVCSAIEQGV--PVSVAGFNALVAAYSKEGF 436
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
DE AL++ + + F+ +I LC + A+ LL MI +G G +
Sbjct: 437 DEQ---ALEVYSVMNKIGLVPSSPTFNYLIMGLCNQGRLDDAQLLLEHMICKGYCVGTS- 492
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
F + +Y ++G++ A++ M G++PD ++ +SG + EA + E
Sbjct: 493 FTIYMDSYFRSGNVEGALKCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNEAYQAFVEMT 552
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ +TY++LI +C++ ALKL +M+ G+ P+V N LI C
Sbjct: 553 GRGFVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSNILIDGFC 606
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 119/297 (40%), Gaps = 42/297 (14%)
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
AW V +M G P +I FC G + + + P LI
Sbjct: 194 AWKVFVEMTARGPRPSLAIFNAMILGFCHRGLVHIGLGLLGVMWRFNVIPDACSYNILIK 253
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
+ A +LD+ + + ++ ++ LC ++ A+ L +M+ G
Sbjct: 254 GYSVFGQAGD-AFQLLDEMRESGCQPTVVTYNILVNVLCHDGNMVDARRLFDEMVKVGIE 312
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG---------YANG 421
FN ++ Y+KAG M A + M++RGL PD T+ L +G A+G
Sbjct: 313 ANTITFNVLVDGYAKAGRMDEAYAACREMKARGLVPDCCTFNILSAGAYKFGKAVQLAHG 372
Query: 422 ---------------------------GQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
G++++A +++ A + +S ++ L+ Y
Sbjct: 373 QQELHEMFGSRISADSVDMVVCRLCWDGRLDDAWKLVCSAIEQGVPVSVAGFNALVAAYS 432
Query: 455 KLEEFD-CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA-LDWRTAEKLLEDMRLKG 509
K E FD AL++ + M +G+ P+ +N LI LC + LD A+ LLE M KG
Sbjct: 433 K-EGFDEQALEVYSVMNKIGLVPSSPTFNYLIMGLCNQGRLD--DAQLLLEHMICKG 486
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 67/172 (38%), Gaps = 36/172 (20%)
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+ A+ AG + A+ +L +R G P + L+ G++ A ++ E
Sbjct: 147 LHAFLAAGMASEALVVLAHIRCGGNTPSLSAIAALLRLLFRAGEVRPAWKVFVEMTARGP 206
Query: 440 RLSPVTYHTLIRGYCK-------------LEEFDC----------------------ALK 464
R S ++ +I G+C + F+ A +
Sbjct: 207 RPSLAIFNAMILGFCHRGLVHIGLGLLGVMWRFNVIPDACSYNILIKGYSVFGQAGDAFQ 266
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
LL+EM++ G QP V YN L+ LC + A +L ++M G+ N IT
Sbjct: 267 LLDEMRESGCQPTVVTYNILVNVLCHDG-NMVDARRLFDEMVKVGIEANTIT 317
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 153/326 (46%), Gaps = 3/326 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +IA + G+G A EVF++ + + N TY I+ + + + + ++M+
Sbjct: 67 NVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVC 126
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P++ ++S C+ G+ E + +KM P + L L + ++ K
Sbjct: 127 HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDS-K 185
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
L + + S ++ LC+ V A+ +L +++ G P ++N++I
Sbjct: 186 AMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 245
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ Y + G++ A M+SR +KPD TY L++G ++ A ++L E + N
Sbjct: 246 NGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVN 305
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+ T++TLI Y + + + +L+EM++ G++PNV Y ++ + C K A
Sbjct: 306 PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFC-KNGKIPEAVA 364
Query: 501 LLEDMRLKGLHLNG-ITRALIRAVKE 525
+L+DM K + N + A+I A E
Sbjct: 365 ILDDMFHKDVLPNAQVYNAIIDAYVE 390
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 161/386 (41%), Gaps = 42/386 (10%)
Query: 139 LETPLVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVE 198
LE L + +VC + + LL +C + E AL D + G T
Sbjct: 114 LEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDG-FTYS 172
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
IL + + S+ G KA +F K+ G T + L + A V + +
Sbjct: 173 ILFDGL---SRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSL 229
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+ G +P +I+ +C+ G+ + A + + + + P LI+ LC+ +
Sbjct: 230 VNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERI 289
Query: 319 VK---LALDMLDD--------FS-------------------GEARKYAIKP----FSSV 344
L ++M D+ F+ E ++ +KP + S+
Sbjct: 290 TNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSI 349
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
+ + C+ + A +L M + P V+N++I AY + G A +++ M+S G+
Sbjct: 350 VNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGI 409
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCA 462
P + TY L+ G N Q+ EA EI+N + NH RL P V+Y+TLI C D A
Sbjct: 410 SPSIVTYNLLIKGLCNQSQISEAEEIIN-SLSNH-RLIPDAVSYNTLISACCYRGNIDKA 467
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSL 488
L L M G++ V Y++LI L
Sbjct: 468 LDLQQRMHKYGIKSTVRTYHQLISGL 493
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 130/293 (44%), Gaps = 9/293 (3%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L++ + G+ + ++ V + TY + LSR S+ K ++
Sbjct: 137 NVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLK 196
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G +++ CK GK A V + P + + LI+ CQ E
Sbjct: 197 NGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGE--- 253
Query: 321 LALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
L+ G+ + IKP ++++I LC+ + + A+ LL +M G P F
Sbjct: 254 --LEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETF 311
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N++I AY + G + +L M+ GLKP+V +Y +++ + G++ EA IL++
Sbjct: 312 NTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFH 371
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ Y+ +I Y + D A L+ +MK G+ P++ YN LI+ LC
Sbjct: 372 KDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLC 424
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 112/255 (43%), Gaps = 1/255 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI K + A ++ + D G ET+ I+A R + + V +M E
Sbjct: 277 NALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQE 336
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ G I++ FCK GK EA + K + P V +I + + +
Sbjct: 337 NGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQ 396
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A +++ +I ++ +I+ LC + A+ +++ + + P +N++I
Sbjct: 397 -AFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLI 455
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
SA G++ A+++ + M G+K V TY L+SG G++ E + + +N+
Sbjct: 456 SACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVV 515
Query: 441 LSPVTYHTLIRGYCK 455
S ++ ++ Y K
Sbjct: 516 PSNAIHNIMVEAYSK 530
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM-RSRGLK 405
SL R DV A +L+ S G P +N + A AGD+ A+ ML+ M R
Sbjct: 4 SLGRHADVRRAFGILA---SAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPP 60
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
P+ ++Y +++G G+ +A E+ +E + + +TY+T+I G+ K + + +L
Sbjct: 61 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 120
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKA--------LDWRTAEKLLED-----MRLKGLHL 512
++M G++PN YN L+ LC LD ++K++ D + GL
Sbjct: 121 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 180
Query: 513 NGITRALIRAVKELEEDAIENGE 535
NG ++A++ + ++ + G+
Sbjct: 181 NGDSKAMLSLFGKYLKNGVTIGD 203
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 106/273 (38%), Gaps = 40/273 (14%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGV-LTVEILNELIALFSKLGKGKAAFEVF 220
+AL+ +C + + + D++ E+ ++ GV TVE N LI + + G+ + F V
Sbjct: 277 NALINGLCKA---ERITNAQDLLMEM--QDNGVNPTVETFNTLIDAYGRTGQLEKCFIVL 331
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
++ + G N +Y + A + A ++ + M LP+++ II + +
Sbjct: 332 SEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEH 391
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE----------------------- 317
G +A ++ + + P LI LC + +
Sbjct: 392 GPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSY 451
Query: 318 -----------TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
+ ALD+ K ++ + +I L ++ + L KM+
Sbjct: 452 NTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQ 511
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
P NA+ N ++ AYSK G+ A ++ K M
Sbjct: 512 NNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 544
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 67/184 (36%), Gaps = 35/184 (19%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++ VI + R A + +M P + +N++I + K GD+ + M
Sbjct: 66 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV 125
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK------------------------- 435
GLKP+ TY L+SG G+M E +L+E
Sbjct: 126 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 185
Query: 436 ----------KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
KN + T L+ G CK + A ++L + + G+ P YN LI
Sbjct: 186 AMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 245
Query: 486 QSLC 489
C
Sbjct: 246 NGYC 249
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 153/326 (46%), Gaps = 3/326 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +IA + G+G A EVF++ + + N TY I+ + + + + ++M+
Sbjct: 204 NVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVC 263
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P++ ++S C+ G+ E + +KM P + L L + ++ K
Sbjct: 264 HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDS-K 322
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
L + + S ++ LC+ V A+ +L +++ G P ++N++I
Sbjct: 323 AMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 382
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ Y + G++ A M+SR +KPD TY L++G ++ A ++L E + N
Sbjct: 383 NGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVN 442
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+ T++TLI Y + + + +L+EM++ G++PNV Y ++ + C K A
Sbjct: 443 PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFC-KNGKIPEAVA 501
Query: 501 LLEDMRLKGLHLNG-ITRALIRAVKE 525
+L+DM K + N + A+I A E
Sbjct: 502 ILDDMFHKDVLPNAQVYNAIIDAYVE 527
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 161/386 (41%), Gaps = 42/386 (10%)
Query: 139 LETPLVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVE 198
LE L + +VC + + LL +C + E AL D + G T
Sbjct: 251 LEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDG-FTYS 309
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
IL + + S+ G KA +F K+ G T + L + A V + +
Sbjct: 310 ILFDGL---SRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSL 366
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+ G +P +I+ +C+ G+ + A + + + + P LI+ LC+ +
Sbjct: 367 VNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERI 426
Query: 319 VK---LALDMLDD--------FS-------------------GEARKYAIKP----FSSV 344
L ++M D+ F+ E ++ +KP + S+
Sbjct: 427 TNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSI 486
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
+ + C+ + A +L M + P V+N++I AY + G A +++ M+S G+
Sbjct: 487 VNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGI 546
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCA 462
P + TY L+ G N Q+ EA EI+N + NH RL P V+Y+TLI C D A
Sbjct: 547 SPSIVTYNLLIKGLCNQSQISEAEEIIN-SLSNH-RLIPDAVSYNTLISACCYRGNIDKA 604
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSL 488
L L M G++ V Y++LI L
Sbjct: 605 LDLQQRMHKYGIKSTVRTYHQLISGL 630
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 130/293 (44%), Gaps = 9/293 (3%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L++ + G+ + ++ V + TY + LSR S+ K ++
Sbjct: 274 NVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLK 333
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G +++ CK GK A V + P + + LI+ CQ E
Sbjct: 334 NGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGE--- 390
Query: 321 LALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
L+ G+ + IKP ++++I LC+ + + A+ LL +M G P F
Sbjct: 391 --LEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETF 448
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N++I AY + G + +L M+ GLKP+V +Y +++ + G++ EA IL++
Sbjct: 449 NTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFH 508
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ Y+ +I Y + D A L+ +MK G+ P++ YN LI+ LC
Sbjct: 509 KDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLC 561
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 112/255 (43%), Gaps = 1/255 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI K + A ++ + D G ET+ I+A R + + V +M E
Sbjct: 414 NALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQE 473
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ G I++ FCK GK EA + K + P V +I + + +
Sbjct: 474 NGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQ 533
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A +++ +I ++ +I+ LC + A+ +++ + + P +N++I
Sbjct: 534 -AFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLI 592
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
SA G++ A+++ + M G+K V TY L+SG G++ E + + +N+
Sbjct: 593 SACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVV 652
Query: 441 LSPVTYHTLIRGYCK 455
S ++ ++ Y K
Sbjct: 653 PSNAIHNIMVEAYSK 667
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 34/239 (14%)
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLC-----------RMKDVHGAKTLLSKMISEGPP 370
AL +L D + EAR P S+ S C R DV A +L+ S G
Sbjct: 111 ALRLLSDLADEARA----PLPSL--SSCNLLLEALLSLGRHADVRRAFGILA---SAGAR 161
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLM-RSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
P +N + A AGD+ A+ ML+ M R P+ ++Y +++G G+ +A E
Sbjct: 162 PDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVE 221
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ +E + + +TY+T+I G+ K + + +L ++M G++PN YN L+ LC
Sbjct: 222 VFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLC 281
Query: 490 LKA--------LDWRTAEKLLED-----MRLKGLHLNGITRALIRAVKELEEDAIENGE 535
LD ++K++ D + GL NG ++A++ + ++ + G+
Sbjct: 282 RAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGD 340
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 106/273 (38%), Gaps = 40/273 (14%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGV-LTVEILNELIALFSKLGKGKAAFEVF 220
+AL+ +C + + + D++ E+ ++ GV TVE N LI + + G+ + F V
Sbjct: 414 NALINGLCKA---ERITNAQDLLMEM--QDNGVNPTVETFNTLIDAYGRTGQLEKCFIVL 468
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
++ + G N +Y + A + A ++ + M LP+++ II + +
Sbjct: 469 SEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEH 528
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE----------------------- 317
G +A ++ + + P LI LC + +
Sbjct: 529 GPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSY 588
Query: 318 -----------TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
+ ALD+ K ++ + +I L ++ + L KM+
Sbjct: 589 NTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQ 648
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
P NA+ N ++ AYSK G+ A ++ K M
Sbjct: 649 NNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 681
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 67/184 (36%), Gaps = 35/184 (19%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++ VI + R A + +M P + +N++I + K GD+ + M
Sbjct: 203 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV 262
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK------------------------- 435
GLKP+ TY L+SG G+M E +L+E
Sbjct: 263 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 322
Query: 436 ----------KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
KN + T L+ G CK + A ++L + + G+ P YN LI
Sbjct: 323 AMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 382
Query: 486 QSLC 489
C
Sbjct: 383 NGYC 386
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 172/371 (46%), Gaps = 40/371 (10%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVA-NQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N +IA F G+ +AA ++ + + G +A NQ TY I + D A V ++M+
Sbjct: 189 NTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEML 248
Query: 260 ETGSL-PDSEKVGKIISWFCKGGKAKEA-----------------------HVVYTLARE 295
G + P++ +I +C GK A H ++ R
Sbjct: 249 TKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRG 308
Query: 296 KKMYP----------PQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
+ Y V + LI+ C+E VK AL++ ++ S + + ++S
Sbjct: 309 TEAYELVEEMGGKGLALDVFTYNILINGHCKEGN-VKKALEIFENMSRRGVRATVVTYTS 367
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
+I +L + V L + + G P ++N++I+++S +G++ A E++ M +
Sbjct: 368 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 427
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
+ PD TY LM G G+++EA ++++E K + VTY+TLI GY + AL
Sbjct: 428 IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDAL 487
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITR-ALIRA 522
++ NEM + G P + YN LIQ LC K AE ++++M G+ + T +LI
Sbjct: 488 RIRNEMMNKGFNPTLLTYNALIQGLC-KNGQGDDAENMVKEMVENGITPDDSTYISLIEG 546
Query: 523 VKELEEDAIEN 533
+ +E AI++
Sbjct: 547 LTTEDERAIDD 557
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 23/174 (13%)
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
A++P ++ +R L S+M S P A + ++SA A PA +
Sbjct: 100 AVRPHATSLR-------------LYSRMKSLSLPISTASLHPLLSALPSA----PAFALF 142
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
M L T+ ++ + G+ A E+L + + ++ VTY+T+I G+C
Sbjct: 143 ADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRPNA----VTYNTVIAGFCSR 198
Query: 457 EEFDCALKLLNEMKDV-GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
AL ++ EM++ G+ PN Y +I C K A K+ ++M KG
Sbjct: 199 GRVQAALDIMREMRERGGIAPNQYTYGTVISGWC-KVGRVDEAVKVFDEMLTKG 251
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 137/315 (43%), Gaps = 2/315 (0%)
Query: 202 ELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET 261
+ + F+K + + N+ +G N + I L R D+A S+ KM +
Sbjct: 93 KFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKL 152
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
G P + +I+ C GK KEA ++ + P +I+ LC+ T +
Sbjct: 153 GIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNT-SM 211
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A+D+ K + ++++I SLC+ + V+ A LS+M+ G PP +N ++
Sbjct: 212 AVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVH 271
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
+ G + A + K M R + PD T T L+ G G + EA + +
Sbjct: 272 GFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEP 331
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+ TY+ L+ GYC + A K+ M G P V YN LI C K+ A+ L
Sbjct: 332 NISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFC-KSRRMDEAKSL 390
Query: 502 LEDMRLKGLHLNGIT 516
L +M K L+ + +T
Sbjct: 391 LAEMYHKALNPDTVT 405
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 166/392 (42%), Gaps = 52/392 (13%)
Query: 131 HEDFVLKVLETPLVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEK 190
H DF + +L LG + T+ +AL+ +C+ KE L++ + G
Sbjct: 138 HVDFAVSILGKMFKLGIH-------PTASTFNALINGLCNEGKIKEAVELFNEMVRRGH- 189
Query: 191 EKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDW 250
E V++ N +I K G A +VF K GC + TY I++L + ++ +
Sbjct: 190 EPNVISY---NTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVND 246
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A +M++ G P+ ++ FC G+ EA ++ + + P + L+
Sbjct: 247 AMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVD 306
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
LC+E V A+ + M +G
Sbjct: 307 GLCKEGM------------------------------------VSEARLVFETMTEKGVE 330
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P + +N+++ Y M A ++ ++M +G P V++Y L++G+ +M+EA +
Sbjct: 331 PNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSL 390
Query: 431 LNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
L A+ H L+P VTY TL++G C+ AL + EM G+ PN+ Y+ L+
Sbjct: 391 L--AEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGF 448
Query: 489 CLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
C K A KLL+ M+ K L N + ++
Sbjct: 449 C-KHGHLDEALKLLKSMQEKKLEPNIVHHTIL 479
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 108/219 (49%), Gaps = 8/219 (3%)
Query: 291 TLAREKKMYPPQSVVAF--LISSLCQEDE--TVKLALDMLDDFSGEARKYAIKPFSSVIR 346
+ R +M P SV F + S ++ + TV + +D F Y++ + +I
Sbjct: 75 SFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSL---NVLIN 131
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
LCR+ V A ++L KM G P + FN++I+ G + A+E+ M RG +P
Sbjct: 132 CLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEP 191
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
+V +Y +++G G A ++ + ++N + VTY+T+I CK + A++ L
Sbjct: 192 NVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFL 251
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
+EM D G+ PNV YN ++ C+ A +L ++M
Sbjct: 252 SEMLDRGIPPNVFTYNCMVHGFCILG-QLNEATRLFKEM 289
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 129/283 (45%), Gaps = 2/283 (0%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
F + + AA + N GC ++ Y I A + E+M+ G PD
Sbjct: 156 FCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPD 215
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
K+I C+ G +E+ + ++ + P V I CQ + A+ +L
Sbjct: 216 IMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQR-AMLNEAIRLL 274
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
D G + ++++I LC+ V A+ L KM++EG P +NS+I Y K
Sbjct: 275 DGV-GRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKL 333
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
G M A ++L+ +G PD TY L++G G ++ A + NEA + + + V
Sbjct: 334 GMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLC 393
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+TL++G + ALKL+NEM + G P++ YN +I LC
Sbjct: 394 NTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLC 436
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 149/325 (45%), Gaps = 28/325 (8%)
Query: 192 KGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWA 251
+G +LNE I L +G+G + TY I L + A
Sbjct: 259 QGFCQRAMLNEAIRLLDGVGRGLTPDVI--------------TYNTLICGLCKNFKVVEA 304
Query: 252 WSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISS 311
KM+ G PD II +CK G + A + K P +S LI+
Sbjct: 305 EHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLING 364
Query: 312 LCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISE 367
LCQ D + A+++ + EA + +KP +++++ L + + A L+++M
Sbjct: 365 LCQ-DGDIDRAINVFN----EAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSEN 419
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P +N VI+ K G ++ A ++ ++G PDV+T+ L+ GY +++ A
Sbjct: 420 GCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNA 479
Query: 428 CEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
EI++ NH +SP +TY++++ G CK +++ + M + G PN+ YN L
Sbjct: 480 IEIVDRMW-NHG-VSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILT 537
Query: 486 QSLCLKALDWRTAEKLLEDMRLKGL 510
+S C KA A L+E+M+ KGL
Sbjct: 538 ESFC-KARKVEEALNLIEEMQNKGL 561
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 145/330 (43%), Gaps = 21/330 (6%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N+LI + G + + + NK G N T I+ +R + + A + + +
Sbjct: 219 FNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDG-V 277
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEA-HVVYTLAREKKMYPPQSVV-AFLISSLCQEDE 317
G PD +I CK K EA H + + E Y P +I C+
Sbjct: 278 GRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEG--YEPDGFTYNSIIDGYCK--- 332
Query: 318 TVKLALDMLDDFSGEARKYAIKPF-------SSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
L M+ + R A K F S+I LC+ D+ A + ++ + +G
Sbjct: 333 -----LGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLK 387
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P + N+++ S+ G + A++++ M G PD++TY +++G G + +A +
Sbjct: 388 PNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNL 447
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
+ +A T++TLI GYCK + D A+++++ M + GV P+V YN ++ LC
Sbjct: 448 VIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLC- 506
Query: 491 KALDWRTAEKLLEDMRLKGLHLNGITRALI 520
KA + + M KG N IT ++
Sbjct: 507 KAGKYEDVMGTFKLMMEKGCVPNIITYNIL 536
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 130/306 (42%), Gaps = 3/306 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I + KLG + A ++ G V ++ TY I L + D A +V + +E
Sbjct: 324 NSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAME 383
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ ++ + G +A + E P +I+ LC+ V
Sbjct: 384 KGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIG-CVS 442
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A +++ D + + F+++I C+ + A ++ +M + G P +NS++
Sbjct: 443 DADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSIL 502
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ KAG M KLM +G P++ TY L + ++EEA ++ E +
Sbjct: 503 NGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLT 562
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKD-VGVQPNVDEYNKLIQSLCLKALDWRTAE 499
V + TL++G+C + D A +L + + + YN +I + K L+ AE
Sbjct: 563 PDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGK-LNMNMAE 621
Query: 500 KLLEDM 505
KL M
Sbjct: 622 KLFNKM 627
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 133/319 (41%), Gaps = 51/319 (15%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A VFN+ + G N ++ LS++ + A + +M E G PD +I+
Sbjct: 374 AINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVIN 433
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
CK G +A + A K P LI C+ KL LD +
Sbjct: 434 GLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCK-----KLKLDNAIEIVDRMWN 488
Query: 336 YAIKP----FSSVIRSLCR---MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD 388
+ + P ++S++ LC+ +DV G L M+ +G P +N + ++ KA
Sbjct: 489 HGVSPDVITYNSILNGLCKAGKYEDVMGTFKL---MMEKGCVPNIITYNILTESFCKARK 545
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI------------------ 430
+ A+ +++ M+++GL PDV + LM G+ + G ++ A ++
Sbjct: 546 VEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYN 605
Query: 431 -----------LNEAKKNHSRL-----SP--VTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
+N A+K +++ SP TY +I G+CK + L +
Sbjct: 606 IMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEK 665
Query: 473 GVQPNVDEYNKLIQSLCLK 491
G+ P++ + +++ LCLK
Sbjct: 666 GLIPSLTTFGRVLNCLCLK 684
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 2/179 (1%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+ F+ ++S CR H A+ LL+ M S+G + +VI + + A E+ +
Sbjct: 146 VYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFE 205
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M G+ PD+ + L+ G ++E+ +LN+ K + T + I+G+C+
Sbjct: 206 EMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRA 265
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ A++LL+ + G+ P+V YN LI LC K AE L M +G +G T
Sbjct: 266 MLNEAIRLLDGVGR-GLTPDVITYNTLICGLC-KNFKVVEAEHYLRKMVNEGYEPDGFT 322
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 1/176 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+ +R+ R + A + +M P +N++++ + A ++ MR
Sbjct: 79 YIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMR 138
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+G+ PDVYT+T M + + A +LN S V Y T+I G+ +
Sbjct: 139 DKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRV 198
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A +L EM +G+ P++ +NKLI +LC K + +E+LL + +G+ N T
Sbjct: 199 EAHELFEEMLGLGICPDIMAFNKLIHTLCRKG-HVQESERLLNKVLKRGVSPNLFT 253
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 113/280 (40%), Gaps = 12/280 (4%)
Query: 155 WVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLT-VEILNELIALFSKLGKG 213
W + V++ L K C S V I KG L V N LI + K K
Sbjct: 426 WTYNLVINGLCKIGCVSDADNLV---------IDAIAKGHLPDVFTFNTLIDGYCKKLKL 476
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
A E+ ++ ++G + TY + L + ++ + M+E G +P+ +
Sbjct: 477 DNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNIL 536
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEA 333
FCK K +EA + + K + P L+ C + + A + +
Sbjct: 537 TESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGD-LDGAYQLFKRVDEQY 595
Query: 334 R-KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
+ + I ++ +I + +++ A+ L +KM G P + + +I + K G++
Sbjct: 596 KFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSG 655
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
L + +GL P + T+ +++ ++ EA I++
Sbjct: 656 YSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIH 695
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 147/308 (47%), Gaps = 8/308 (2%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +IA + GKG A +VF++ D G NQ TY I+ + + + + ++M++
Sbjct: 199 NVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQ 258
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ ++S C+ G+ E + M P + L L + ++
Sbjct: 259 DGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRT 318
Query: 321 LALDMLDDFSGEARKYAI---KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
ML F +K I S ++ LC+ V A+ +L ++ G P A++N
Sbjct: 319 ----MLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYN 374
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
++I+ Y + D+ A + + M+SR ++PD TY L++G + EA +++ E +K+
Sbjct: 375 TLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKS 434
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
S T++TLI Y + + + +L++M+D G++ NV + ++++ C K
Sbjct: 435 GVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFC-KNGKIPE 493
Query: 498 AEKLLEDM 505
A +L+DM
Sbjct: 494 AVAILDDM 501
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 151/361 (41%), Gaps = 38/361 (10%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ LL +C + E AL D + G T IL + + ++ G + +F
Sbjct: 269 NVLLSGLCRAGRMDETRALMDEMTSYSMLPDG-FTYSILFDGL---TRTGDSRTMLSLFG 324
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ G + T + L + A V E ++ TG +P + +I+ +C+
Sbjct: 325 ESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVR 384
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ-------ED--------------ETVK 320
+ A ++ + + + P LI+ LC+ ED ET
Sbjct: 385 DLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFN 444
Query: 321 LALD-------------MLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
+D +L D + K + F SV+++ C+ + A +L MI +
Sbjct: 445 TLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHK 504
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
P V+NS+I AY ++G A +++ M+S G+ ++TY L+ G Q++EA
Sbjct: 505 DVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEA 564
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
E++ R V+Y+T+I C + D AL+LL EM ++P + Y+ L+ +
Sbjct: 565 EELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSA 624
Query: 488 L 488
L
Sbjct: 625 L 625
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 118/270 (43%), Gaps = 5/270 (1%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA 216
T+ + + L+ C + +++++ +K + + N LI K+ A
Sbjct: 369 TTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHI----TYNALINGLCKMEMITEA 424
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
++ + G + ET+ I+A R + ++V M + G + G ++
Sbjct: 425 EDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKA 484
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
FCK GK EA + K + P V +I + + T + A +++
Sbjct: 485 FCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQ-AFLLVEKMKSSGVSA 543
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+I ++ +++ LC+ + A+ L+ + ++G P +N++ISA GD A+E+L
Sbjct: 544 SIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELL 603
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
+ M ++P + TY L+S + G++ +
Sbjct: 604 QEMHKYDIRPTLRTYHPLLSALGSAGRVHD 633
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 104/277 (37%), Gaps = 68/277 (24%)
Query: 299 YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI-------------------- 338
+PP V L +L +T DD +
Sbjct: 46 HPPAVSVPDLYHALAATADTQ-------DDLRAPPHSFLCDAASALVVASARLCQPDGAL 98
Query: 339 -------------------KPFSSV---------IRSLCRMKDVHGAKTLLSKMISEGPP 370
P S+ + S+ R DV A LL ++ G
Sbjct: 99 RLLSLLASAGDGACAGSVRSPLPSLSSCNLLLESLLSVGRHADVRAAFGLL---VAAGAR 155
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLM-RSRGL-KPDVYTYTGLMSGYANGGQMEEAC 428
P +N + A AGD+ A+ ML+ M RS G PD ++Y +++G G+ +A
Sbjct: 156 PDTFAWNKAVQACVAAGDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDAL 215
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
++ +E + +TY+T+I G+ K + + +L ++M G +PNV YN L+ L
Sbjct: 216 KVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGL 275
Query: 489 CLKA--------LDWRTAEKLLEDMRLKGLHLNGITR 517
C +D T+ +L D + +G+TR
Sbjct: 276 CRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTR 312
>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
Length = 614
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 147/317 (46%), Gaps = 2/317 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N L+ + GK +A +F++ G T+ + + + + A ++ M
Sbjct: 247 FNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANALRGLMA 306
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G PD G + CK G+ ++A ++ RE+ + P V LI + C+E V
Sbjct: 307 KAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEG-NV 365
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
L++ + + K + ++++ LCR++D+ A ++ +M + G P + ++
Sbjct: 366 AAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTL 425
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I + K G++ AMEM + M G+ D TYT L+SG + G+ ++ IL E +
Sbjct: 426 IDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGL 485
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
TY +I +CK + KLL EM++ G +P V YN ++ C+ + A+
Sbjct: 486 EPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILG-QMKNAD 544
Query: 500 KLLEDMRLKGLHLNGIT 516
LL M G+ + IT
Sbjct: 545 MLLNAMLNIGVCPDDIT 561
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 1/178 (0%)
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
K F+ ++R + R + A+ + +M+ G PP FN+++S KA D+ A + L
Sbjct: 245 KQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANALRGL 304
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M G+ PDVYTY M G G++++A E+ E ++ + V + TLI +CK
Sbjct: 305 MAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGN 364
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
L+L EM G++ ++ YN L LC + D + A ++E+MR GL + +T
Sbjct: 365 VAAGLELHREMATRGIKTDLVAYNALANGLC-RVRDLKAANDIVEEMRNNGLKPDKVT 421
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 142/308 (46%), Gaps = 10/308 (3%)
Query: 206 LFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLP 265
L ++L A+ + + D G + + + + R A ++ ++M+ G P
Sbjct: 218 LMNRLPSVPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPP 277
Query: 266 DSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDM 325
++S CK A+ + L + + P + LC+ ++ A++M
Sbjct: 278 TVVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGR-IQDAVEM 336
Query: 326 LDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
+ E R+ + P F+++I + C+ +V L +M + G +N++ +
Sbjct: 337 FE----EMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALAN 392
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
+ D+ A ++++ MR+ GLKPD TYT L+ G+ G+++ A E+ E L
Sbjct: 393 GLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVAL 452
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
VTY TLI G K + ++L EM + G++P+ Y +I + C K D +T KL
Sbjct: 453 DEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFC-KNSDVKTGFKL 511
Query: 502 LEDMRLKG 509
L++M+ KG
Sbjct: 512 LKEMQNKG 519
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G+ P+ + LM G++ A + +E + + VT++TL+ G CK + + A
Sbjct: 239 GVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSA 298
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
L M GV P+V Y +Q LC KA + A ++ E+MR +G++ N +
Sbjct: 299 NALRGLMAKAGVAPDVYTYGAFMQGLC-KAGRIQDAVEMFEEMRERGVNPNTV 350
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 134/294 (45%), Gaps = 1/294 (0%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
V N LI G K A + GC N TY + A R D A +
Sbjct: 149 NVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLV 208
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
M++ G P+ +++ CK GK ++A V+ + + P L+ C+
Sbjct: 209 GMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKA 268
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ + AL + + + + + F+S+I +C+ ++ A TL+ +M G
Sbjct: 269 GCSHE-ALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVT 327
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
F ++I + K G + A+ ++ MR +KP V Y L++GY G+M+EA E+L+E +
Sbjct: 328 FTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEME 387
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ VTY T+I YCK + A +L +M + GV P+ Y+ LI+ LC
Sbjct: 388 AKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLC 441
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 127/282 (45%), Gaps = 17/282 (6%)
Query: 243 SRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQ 302
S R+ FD M+ G P+ +I C G KEA + R P
Sbjct: 133 SARRFFD-------SMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNV 185
Query: 303 SVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAK 358
L+++ + E +D + G +KP F+S++ +C+ + A+
Sbjct: 186 VTYNTLVAAFFRAGE-----VDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDAR 240
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+ +M+ EG P +N+++ Y KAG A+ + M +G+ PDV T+T L+
Sbjct: 241 KVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVM 300
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G +E A ++ + ++ +++ VT+ LI G+CK D AL + M+ ++P+V
Sbjct: 301 CKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSV 360
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
YN LI C+ A +LL +M KGL + +T + I
Sbjct: 361 VCYNALINGYCMVG-RMDEARELLHEMEAKGLKPDVVTYSTI 401
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 112/218 (51%), Gaps = 2/218 (0%)
Query: 299 YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
Y P SV+A+ L D ++ A D + + ++ +IR+LC A
Sbjct: 112 YVP-SVLAYNAVLLALSDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEAL 170
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
++L M G P +N++++A+ +AG++ A ++ +M GLKP++ T+ +++G
Sbjct: 171 SILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGM 230
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G+ME+A ++ +E + V+Y+TL+ GYCK AL + EM G+ P+V
Sbjct: 231 CKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDV 290
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ LI +C KA + A L+ MR +GL +N +T
Sbjct: 291 VTFTSLIHVMC-KAGNLEWAVTLVRQMRERGLQMNEVT 327
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 153/363 (42%), Gaps = 42/363 (11%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L++A+C +KE ++ ++ G V N L+A F + G+ A +
Sbjct: 154 NILIRALCGRGHRKEALSILRDMRGAGCGP----NVVTYNTLVAAFFRAGEVDGAERLVG 209
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
D G N T+ + + + + A V ++M+ G PD ++ +CK G
Sbjct: 210 MMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAG 269
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLC--------------------QEDETVKL 321
+ EA V+ +K + P LI +C Q +E
Sbjct: 270 CSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFT 329
Query: 322 ALDMLDDFSGEA------------RKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMI 365
AL +D F + R+ IKP ++++I C + + A+ LL +M
Sbjct: 330 AL--IDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEME 387
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
++G P ++++ISAY K D A E+ + M +G+ PD TY+ L+ ++
Sbjct: 388 AKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLS 447
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
+A + K + TY +LI G+CK + AL L ++M GV P+V Y+ LI
Sbjct: 448 DAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLI 507
Query: 486 QSL 488
L
Sbjct: 508 NGL 510
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 117/293 (39%), Gaps = 21/293 (7%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
+V N LI + +G+ A E+ ++ G + TY I A + A+ +
Sbjct: 359 SVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELN 418
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
++M+E G LPD+ +I C+ + +AHV++ + + P + LI C+E
Sbjct: 419 QQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKE 478
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
V+ AL + D + +S +I L + A+ LL K+ E P P N
Sbjct: 479 G-NVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTK 537
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+++++ KA ++ + L+ G+ G M EA ++
Sbjct: 538 YDALMHCCRKA--------------------ELKSVLALLKGFCMKGLMNEADKVYQSML 577
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ L Y LI G+C+ AL +M G PN LI+ L
Sbjct: 578 DRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGL 630
>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 143/306 (46%), Gaps = 3/306 (0%)
Query: 212 KGKAAFEVFNKFGDYGCVANQETYYFTIEALSR-RKIFDWAWSVCEKMIETGSLPDSEKV 270
K KAA ++ + CV +++ R + FD + V KM + P +
Sbjct: 66 KFKAAEDIVARMKIENCVVSEDILLSICRGYGRVHRPFD-SLRVFHKMKDFDCDPSQKAY 124
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
+++ + + A Y RE + P + + LI +LC+ D TV L + +
Sbjct: 125 VTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFHEMP 184
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
+ ++I LCR + AK L ++M+ + P + S+I+ + ++
Sbjct: 185 KRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVD 244
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
AM ++ M+ +G++P+V+TY+ LM G G+ +A E+ R + VTY TLI
Sbjct: 245 EAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLI 304
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
G CK ++ A++LL+ M G++P+ Y K+I C + +R A L++M L G+
Sbjct: 305 TGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVS-KFREAANFLDEMILGGI 363
Query: 511 HLNGIT 516
N +T
Sbjct: 364 TPNRLT 369
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 137/340 (40%), Gaps = 22/340 (6%)
Query: 178 YALWDIVKEIGEKEKGVLTVEILNELI-ALFSKLGKGKAAFEVFNKFGDYGCVANQETYY 236
+ + ++EIG TV LN LI AL G A ++F++ GC + TY
Sbjct: 141 FKFYKNMREIGLPP----TVASLNVLIKALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYG 196
Query: 237 FTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREK 296
I L R D A + +M+E P +I+ C EA + K
Sbjct: 197 TLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGK 256
Query: 297 KMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHG 356
+ P + L+ LC++ +++ A+++ + + + ++++I LC+ + +
Sbjct: 257 GIEPNVFTYSSLMDGLCKDGRSLQ-AMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQE 315
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT---- 412
A LL +M +G P ++ VIS + A L M G+ P+ T+
Sbjct: 316 AVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGITPNRLTWNIHVK 375
Query: 413 -------GLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
GL + Y + A + + + T +L++ CK EF A++L
Sbjct: 376 TSNEVVRGLCTNYPS-----RAFTLYLSMRSRGISVEVETLDSLVKCLCKKGEFQKAVQL 430
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
++E+ G PN + LI + ++ LL D+
Sbjct: 431 VDEIVTDGCIPNKGTWKLLIGHTLDNTIVGEASDSLLRDL 470
>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
Length = 604
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 148/315 (46%), Gaps = 13/315 (4%)
Query: 226 YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKE 285
+GC N TY I+A R A+ + EKM G + + I+ C+ G+
Sbjct: 240 HGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGA 299
Query: 286 AHVVYTLAREKKMYPPQS-----VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
A + REK+ P+ + L+ +L + V +A+++ + E
Sbjct: 300 ALEFF---REKRTVWPEGKGNAVTYSTLVGALLHTN-NVGMAMELFHEKMSEGHSPDAIM 355
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+ ++I L + + A ++ S M G +N +I+ + + + A E+L+ M+
Sbjct: 356 YFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMK 415
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G++PDV TY L+SG G E+L + + + S +T+ TL+ GYCK+ + D
Sbjct: 416 EVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKID 475
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RAL 519
AL++L M + G+ PN YN LI LC + D A +L ++M+ K + N T AL
Sbjct: 476 EALRILRSMDESGIHPNNVIYNTLIDFLCKRG-DVDLAIELFDEMKEKSVPANVTTFNAL 534
Query: 520 IRAV--KELEEDAIE 532
++ + K + E A E
Sbjct: 535 LKGLRDKNMPEKAFE 549
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 126/257 (49%), Gaps = 8/257 (3%)
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY--PPQSVV-AFLISSLCQEDETVKL 321
PD + ++ CK G+ +EA + + R ++ PP +V LI + C+ + +
Sbjct: 207 PDVVTLNTVVDGLCKSGRVQEA-LAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVG-NISM 264
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP-PGNAV-FNSV 379
A ++++ E I ++++ LCR A + + P GNAV ++++
Sbjct: 265 AYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTL 324
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+ A ++ AME+ S G PD Y ++SG G++E+AC + + K+
Sbjct: 325 VGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGF 384
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
+L Y+ LI G+C+ + A +LL EMK+VG++P+V YN L+ C KA D+ +
Sbjct: 385 KLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSC-KAGDFAAVD 443
Query: 500 KLLEDMRLKGLHLNGIT 516
+LL M G + IT
Sbjct: 444 ELLGKMIDDGCQPSVIT 460
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 140/316 (44%), Gaps = 15/316 (4%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ A C VG + +++V+++ E E + LN ++ + G+ AA E F
Sbjct: 250 NCLIDAFCR-VGN--ISMAYELVEKM-ENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFR 305
Query: 222 KFGDY--GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
+ N TY + AL A + + + G PD+ +IS +
Sbjct: 306 EKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQ 365
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
G+ ++A + + +E LI+ C++ + + A ++L E ++ I+
Sbjct: 366 AGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRK-KRLHEAYELLQ----EMKEVGIR 420
Query: 340 P----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
P +++++ C+ D LL KMI +G P F +++ Y K G + A+ +
Sbjct: 421 PDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRI 480
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
L+ M G+ P+ Y L+ G ++ A E+ +E K+ + T++ L++G
Sbjct: 481 LRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRD 540
Query: 456 LEEFDCALKLLNEMKD 471
+ A +L+++M++
Sbjct: 541 KNMPEKAFELMDQMRE 556
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 108/235 (45%), Gaps = 1/235 (0%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A E+F++ G + Y+ I L++ + A S+ M E G D++ +I+
Sbjct: 337 AMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIA 396
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
FC+ + EA+ + +E + P L+S C+ + + ++L + +
Sbjct: 397 GFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVD-ELLGKMIDDGCQ 455
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
++ F +++ C++ + A +L M G P N ++N++I K GD+ A+E+
Sbjct: 456 PSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIEL 515
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
M+ + + +V T+ L+ G + E+A E++++ ++ VT L+
Sbjct: 516 FDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLM 570
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 77/154 (50%), Gaps = 5/154 (3%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMIS-EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
F+S++ +L R++DV G + + M P + +++ KAG + A+ +L M
Sbjct: 139 FNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGM 198
Query: 400 RSRGL--KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCK 455
+ L +PDV T ++ G G+++EA + + + P VTY+ LI +C+
Sbjct: 199 SRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCR 258
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ A +L+ +M++ GV N+ N ++ LC
Sbjct: 259 VGNISMAYELVEKMENEGVPQNIVTLNTIVGGLC 292
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRS-RGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
FNS+++A ++ D+ + LM+ ++PDV TY L++G G++ +A +L+
Sbjct: 139 FNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGM 198
Query: 435 KKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNE-MKDV-GVQPNVDEYNKLIQSLCL 490
+ + P VT +T++ G CK AL + + M V G PN YN LI + C
Sbjct: 199 SRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFC- 257
Query: 491 KALDWRTAEKLLEDMRLKG-----LHLNGITRALIRA 522
+ + A +L+E M +G + LN I L RA
Sbjct: 258 RVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRA 294
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 89/218 (40%), Gaps = 11/218 (5%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I+ ++ G+ + A + + + G + + Y I R+K A+ + ++M E G
Sbjct: 359 MISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVG 418
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQE---DE 317
PD ++S CK G + + P SV+ F L+ C+ DE
Sbjct: 419 IRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQP--SVITFGTLVHGYCKVGKIDE 476
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
+++ M D SG I ++++I LC+ DV A L +M + P FN
Sbjct: 477 ALRILRSM--DESGIHPNNVI--YNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFN 532
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
+++ A E++ MR PD T LM
Sbjct: 533 ALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLM 570
>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
Length = 332
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 125/275 (45%), Gaps = 2/275 (0%)
Query: 232 QETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYT 291
+ Y I L + + A ++ KM ET II CK G A ++T
Sbjct: 41 HQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFT 100
Query: 292 LAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRM 351
+K ++P + +I S C+ A +L D + FS++I +L +
Sbjct: 101 EMHDKGIFPDVITYSGMIDSFCRSGRWTD-AEQLLRDMIERQINPDVVTFSALINALVKE 159
Query: 352 KDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTY 411
V A+ + M+ G P +NS+I + K + A ML M S+ PDV T+
Sbjct: 160 GKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTF 219
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
+ L++GY +++ EI E + + VTY TLI G+C++ + D A LLN M
Sbjct: 220 STLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMIS 279
Query: 472 VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
GV PN + ++ SLC K + R A +LED++
Sbjct: 280 SGVAPNYITFQSMLASLCSKK-ELRKAFAILEDLQ 313
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 148/328 (45%), Gaps = 17/328 (5%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
L+ +C + AL D + E G + G I+N L K+G ++A + +K
Sbjct: 15 TLMNGLCCEGRVLQALALVDRMVEEGHQPYGT----IINGL----CKMGDTESALNLLSK 66
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ A+ Y I+ L + A ++ +M + G PD +I FC+ G+
Sbjct: 67 MEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGR 126
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP-- 340
+A + E+++ P + LI++L +E + + ++ G+ + I P
Sbjct: 127 WTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEA-----EEIYGDMLRRGIFPTT 181
Query: 341 --FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
++S+I C+ ++ AK +L M S+ P F+++I+ Y KA + ME+
Sbjct: 182 ITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 241
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M RG+ + TYT L+ G+ G ++ A ++LN + + +T+ +++ C +E
Sbjct: 242 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKE 301
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A +L +++ V P + + IQ
Sbjct: 302 LRKAFAILEDLQKSEVCPRIVQAKFKIQ 329
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 43/215 (20%)
Query: 304 VVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLL 361
VV F L++ LC E ++ AL ++D E + P+ ++I LC+M D A LL
Sbjct: 10 VVTFTTLMNGLCCEGRVLQ-ALALVDRMVEEGHQ----PYGTIINGLCKMGDTESALNLL 64
Query: 362 SKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG 421
SKM ++N++I K G A + M +G+ PDV TY+G+
Sbjct: 65 SKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGM------- 117
Query: 422 GQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEY 481
I +C+ + A +LL +M + + P+V +
Sbjct: 118 ----------------------------IDSFCRSGRWTDAEQLLRDMIERQINPDVVTF 149
Query: 482 NKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ LI +L +K AE++ DM +G+ IT
Sbjct: 150 SALINAL-VKEGKVSEAEEIYGDMLRRGIFPTTIT 183
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 72/160 (45%), Gaps = 34/160 (21%)
Query: 399 MRSRGLKPDVYTYTGLMSGYA---------------------------NG----GQMEEA 427
M G +PDV T+T LM+G NG G E A
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESA 60
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
+L++ ++ H + V Y+ +I CK A L EM D G+ P+V Y+ +I S
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 488 LCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRA-VKE 525
C ++ W AE+LL DM + ++ + +T ALI A VKE
Sbjct: 121 FC-RSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKE 159
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 153/326 (46%), Gaps = 3/326 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +IA + G+G A EVF++ + + N TY I+ + + + + ++M+
Sbjct: 19 NVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVC 78
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P++ ++S C+ G+ E + +KM P + L L + ++ K
Sbjct: 79 HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDS-K 137
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
L + + S ++ LC+ V A+ +L +++ G P ++N++I
Sbjct: 138 AMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 197
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ Y + G++ A M+SR +KPD TY L++G ++ A ++L E + N
Sbjct: 198 NGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVN 257
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+ T++TLI Y + + + +L+EM++ G++PNV Y ++ + C K A
Sbjct: 258 PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFC-KNGKIPEAVA 316
Query: 501 LLEDMRLKGLHLNG-ITRALIRAVKE 525
+L+DM K + N + A+I A E
Sbjct: 317 ILDDMFHKDVLPNAQVYNAIIDAYVE 342
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 161/386 (41%), Gaps = 42/386 (10%)
Query: 139 LETPLVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVE 198
LE L + +VC + + LL +C + E AL D + G T
Sbjct: 66 LEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDG-FTYS 124
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
IL + + S+ G KA +F K+ G T + L + A V + +
Sbjct: 125 ILFDGL---SRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSL 181
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+ G +P +I+ +C+ G+ + A + + + + P LI+ LC+ +
Sbjct: 182 VNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERI 241
Query: 319 VK---LALDMLDD--------FS-------------------GEARKYAIKP----FSSV 344
L ++M D+ F+ E ++ +KP + S+
Sbjct: 242 TNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSI 301
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
+ + C+ + A +L M + P V+N++I AY + G A +++ M+S G+
Sbjct: 302 VNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGI 361
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCA 462
P + TY L+ G N Q+ EA EI+N + NH RL P V+Y+TLI C D A
Sbjct: 362 SPSIVTYNLLIKGLCNQSQISEAEEIIN-SLSNH-RLIPDAVSYNTLISACCYRGNIDKA 419
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSL 488
L L M G++ V Y++LI L
Sbjct: 420 LDLQQRMHKYGIKSTVRTYHQLISGL 445
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 130/293 (44%), Gaps = 9/293 (3%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L++ + G+ + ++ V + TY + LSR S+ K ++
Sbjct: 89 NVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLK 148
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G +++ CK GK A V + P + + LI+ CQ E
Sbjct: 149 NGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGE--- 205
Query: 321 LALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
L+ G+ + IKP ++++I LC+ + + A+ LL +M G P F
Sbjct: 206 --LEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETF 263
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N++I AY + G + +L M+ GLKP+V +Y +++ + G++ EA IL++
Sbjct: 264 NTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFH 323
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ Y+ +I Y + D A L+ +MK G+ P++ YN LI+ LC
Sbjct: 324 KDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLC 376
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 112/255 (43%), Gaps = 1/255 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI K + A ++ + D G ET+ I+A R + + V +M E
Sbjct: 229 NALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQE 288
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ G I++ FCK GK EA + K + P V +I + + +
Sbjct: 289 NGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQ 348
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A +++ +I ++ +I+ LC + A+ +++ + + P +N++I
Sbjct: 349 -AFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLI 407
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
SA G++ A+++ + M G+K V TY L+SG G++ E + + +N+
Sbjct: 408 SACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVV 467
Query: 441 LSPVTYHTLIRGYCK 455
S ++ ++ Y K
Sbjct: 468 PSNAIHNIMVEAYSK 482
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 106/273 (38%), Gaps = 40/273 (14%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGV-LTVEILNELIALFSKLGKGKAAFEVF 220
+AL+ +C + + + D++ E+ ++ GV TVE N LI + + G+ + F V
Sbjct: 229 NALINGLCKA---ERITNAQDLLMEM--QDNGVNPTVETFNTLIDAYGRTGQLEKCFIVL 283
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
++ + G N +Y + A + A ++ + M LP+++ II + +
Sbjct: 284 SEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEH 343
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE----------------------- 317
G +A ++ + + P LI LC + +
Sbjct: 344 GPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSY 403
Query: 318 -----------TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
+ ALD+ K ++ + +I L ++ + L KM+
Sbjct: 404 NTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQ 463
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
P NA+ N ++ AYSK G+ A ++ K M
Sbjct: 464 NNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 496
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
Query: 360 LLSKMISEGPPPGNAV-FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+L +M +G PP NA +N VI+ +AG A+E+ M R + P+ TY ++ G+
Sbjct: 1 MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 60
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
GG +E + ++ + + + +TY+ L+ G C+ LL+EM + P+
Sbjct: 61 IKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDG 120
Query: 479 DEYNKLIQSL 488
Y+ L L
Sbjct: 121 FTYSILFDGL 130
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 395 MLKLM-RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
ML+ M R P+ ++Y +++G G+ +A E+ +E + + +TY+T+I G+
Sbjct: 1 MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 60
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA--------LDWRTAEKLLED- 504
K + + +L ++M G++PN YN L+ LC LD ++K++ D
Sbjct: 61 IKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDG 120
Query: 505 ----MRLKGLHLNGITRALIRAVKELEEDAIENGE 535
+ GL NG ++A++ + ++ + G+
Sbjct: 121 FTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGD 155
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 67/184 (36%), Gaps = 35/184 (19%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++ VI + R A + +M P + +N++I + K GD+ + M
Sbjct: 18 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV 77
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK------------------------- 435
GLKP+ TY L+SG G+M E +L+E
Sbjct: 78 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 137
Query: 436 ----------KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
KN + T L+ G CK + A ++L + + G+ P YN LI
Sbjct: 138 AMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 197
Query: 486 QSLC 489
C
Sbjct: 198 NGYC 201
>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
Length = 629
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 148/315 (46%), Gaps = 13/315 (4%)
Query: 226 YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKE 285
+GC N TY I+A R A+ + EKM G + + I+ C+ G+
Sbjct: 240 HGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGA 299
Query: 286 AHVVYTLAREKKMYPPQS-----VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
A + REK+ P+ + L+ +L + V +A+++ + E
Sbjct: 300 ALEFF---REKRTVWPEGKGNAVTYSTLVGALLHTNN-VGMAMELFHEKMSEGHSPDAIM 355
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+ ++I L + + A ++ S M G +N +I+ + + + A E+L+ M+
Sbjct: 356 YFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMK 415
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G++PDV TY L+SG G E+L + + + S +T+ TL+ GYCK+ + D
Sbjct: 416 EVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKID 475
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RAL 519
AL++L M + G+ PN YN LI LC + D A +L ++M+ K + N T AL
Sbjct: 476 EALRILRSMDESGIHPNNVIYNTLIDFLCKRG-DVDLAIELFDEMKEKSVPANVTTFNAL 534
Query: 520 IRAV--KELEEDAIE 532
++ + K + E A E
Sbjct: 535 LKGLRDKNMPEKAFE 549
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 126/257 (49%), Gaps = 8/257 (3%)
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY--PPQSVV-AFLISSLCQEDETVKL 321
PD + ++ CK G+ +EA + + R ++ PP +V LI + C+ + +
Sbjct: 207 PDVVTLNTVVDGLCKSGRVQEA-LAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGN-ISM 264
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP-PGNAV-FNSV 379
A ++++ E I ++++ LCR A + + P GNAV ++++
Sbjct: 265 AYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTL 324
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+ A ++ AME+ S G PD Y ++SG G++E+AC + + K+
Sbjct: 325 VGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGF 384
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
+L Y+ LI G+C+ + A +LL EMK+VG++P+V YN L+ C KA D+ +
Sbjct: 385 KLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSC-KAGDFAAVD 443
Query: 500 KLLEDMRLKGLHLNGIT 516
+LL M G + IT
Sbjct: 444 ELLGKMIDDGCQPSVIT 460
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 147/333 (44%), Gaps = 15/333 (4%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ A C VG + +++V+++ E E + LN ++ + G+ AA E F
Sbjct: 250 NCLIDAFCR-VGN--ISMAYELVEKM-ENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFR 305
Query: 222 KFGDY--GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
+ N TY + AL A + + + G PD+ +IS +
Sbjct: 306 EKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQ 365
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
G+ ++A + + +E LI+ C++ + + A ++L E ++ I+
Sbjct: 366 AGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRK-KRLHEAYELLQ----EMKEVGIR 420
Query: 340 P----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
P +++++ C+ D LL KMI +G P F +++ Y K G + A+ +
Sbjct: 421 PDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRI 480
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
L+ M G+ P+ Y L+ G ++ A E+ +E K+ + T++ L++G
Sbjct: 481 LRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRD 540
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ A +L+++M++ P+ + L++ L
Sbjct: 541 KNMPEKAFELMDQMREERCFPDYVTVDVLMEWL 573
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 77/154 (50%), Gaps = 5/154 (3%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMIS-EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
F+S++ +L R++DV G + + M P + +++ KAG + A+ +L M
Sbjct: 139 FNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGM 198
Query: 400 RSRGL--KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCK 455
+ L +PDV T ++ G G+++EA + + + P VTY+ LI +C+
Sbjct: 199 SRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCR 258
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ A +L+ +M++ GV N+ N ++ LC
Sbjct: 259 VGNISMAYELVEKMENEGVPQNIVTLNTIVGGLC 292
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRS-RGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
FNS+++A ++ D+ + LM+ ++PDV TY L++G G++ +A +L+
Sbjct: 139 FNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGM 198
Query: 435 KKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNE-MKDV-GVQPNVDEYNKLIQSLCL 490
+ + P VT +T++ G CK AL + + M V G PN YN LI + C
Sbjct: 199 SRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFC- 257
Query: 491 KALDWRTAEKLLEDMRLKG-----LHLNGITRALIRA 522
+ + A +L+E M +G + LN I L RA
Sbjct: 258 RVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRA 294
>gi|413923869|gb|AFW63801.1| hypothetical protein ZEAMMB73_133996 [Zea mays]
Length = 485
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 144/324 (44%), Gaps = 30/324 (9%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKI-------FDWAW 252
N LI ++K G+ A + + G V + T F I A K D AW
Sbjct: 13 FNVLIDGYAKSGQMHQASAAYREMQARGLVPDSCT--FNIIAARAHKFRLCWDHRLDDAW 70
Query: 253 SVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSL 312
+ IE G +I+ + K G +EA +Y + + + P S +LI L
Sbjct: 71 ELRLGAIEQGVPLRVTGFNALIAAYNKEGLHEEASELYRIINKLGLTPSSSTFNYLIMGL 130
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
C + + + FS+ I R+ V+ A ++M S G P
Sbjct: 131 CNQTDFI--------------------AFSAYINGRSRLDYVNEAYQAFAEMTSRGIVPN 170
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
N +NS+ISA KAG+MT A ++ + MR GL PD+YT L+ G G+++ +L
Sbjct: 171 NITYNSIISALCKAGNMTEAFKLEQNMRQSGLVPDIYTSNILIDGLCREGKLKMVDNLLL 230
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
+ N VTY+T+I YC+ ++ + A+ +N+M G +P++ YN + SL
Sbjct: 231 DMCSNGLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAGCEPDIFTYNIWMHSLYRNH 290
Query: 493 LDWRTAEKLLEDMRLKGLHLNGIT 516
+ A KLL+++ + N +T
Sbjct: 291 M-LNQAGKLLDELVVVDCSPNSVT 313
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 155/378 (41%), Gaps = 68/378 (17%)
Query: 181 WDIVKEIGEKEKGV-LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI 239
W++ +G E+GV L V N LIA ++K G + A E++ G + T+ + I
Sbjct: 70 WEL--RLGAIEQGVPLRVTGFNALIAAYNKEGLHEEASELYRIINKLGLTPSSSTFNYLI 127
Query: 240 EAL----------------SRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
L SR + A+ +M G +P++ IIS CK G
Sbjct: 128 MGLCNQTDFIAFSAYINGRSRLDYVNEAYQAFAEMTSRGIVPNNITYNSIISALCKAGNM 187
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
EA + R+ + P LI LC+E + L M+D+
Sbjct: 188 TEAFKLEQNMRQSGLVPDIYTSNILIDGLCREGK-----LKMVDN--------------- 227
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
LL M S G P +N++I+AY +A DM AM + M G
Sbjct: 228 ----------------LLLDMCSNGLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAG 271
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
+PD++TY M + +A ++L+E + VTY+TL+ G C + D A+
Sbjct: 272 CEPDIFTYNIWMHSLYRNHMLNQAGKLLDELVVVDCSPNSVTYNTLMDGICS-DVLDRAM 330
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCL-----KALDWRTAEKLLEDMRLKGLHLNGITRA 518
L + + +PN N + C +AL W AEKL ED + G TR
Sbjct: 331 ILTGRLIKMAFKPNTITLNVFLSHFCKQGFGNRALMW--AEKLREDSYV----FYGATRN 384
Query: 519 LIR-AVKELEEDAIENGE 535
+I A +E+E+D N E
Sbjct: 385 IIDWARREMEDDPQANNE 402
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 74/203 (36%), Gaps = 57/203 (28%)
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD---------------- 407
M G FN +I Y+K+G M A + M++RGL PD
Sbjct: 1 MAQVGIQVNTITFNVLIDGYAKSGQMHQASAAYREMQARGLVPDSCTFNIIAARAHKFRL 60
Query: 408 ------------------------VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
V + L++ Y G EEA E+ K S
Sbjct: 61 CWDHRLDDAWELRLGAIEQGVPLRVTGFNALIAAYNKEGLHEEASELYRIINKLGLTPSS 120
Query: 444 VTYHTLIRGYC----------------KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
T++ LI G C +L+ + A + EM G+ PN YN +I +
Sbjct: 121 STFNYLIMGLCNQTDFIAFSAYINGRSRLDYVNEAYQAFAEMTSRGIVPNNITYNSIISA 180
Query: 488 LCLKALDWRTAEKLLEDMRLKGL 510
LC KA + A KL ++MR GL
Sbjct: 181 LC-KAGNMTEAFKLEQNMRQSGL 202
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 164/347 (47%), Gaps = 6/347 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ALL A+ + K + L +KE+ + + V+T IL + F ++ + FE N
Sbjct: 309 NALLTALGRAREFKRMNTLLAEMKEM-DIQPNVVTFGILINHLCKFRRVDEALEVFEKMN 367
Query: 222 KFGDYGCVANQE--TYYFTIEALSRRKIFDWAWSVCEKM-IETGSLPDSEKVGKIISWFC 278
G + + TY I+ L + + + E+M + +P++ +I +C
Sbjct: 368 GGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYC 427
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
K + A ++ + + P + L+ +C+ + A++ ++ G+ K
Sbjct: 428 KASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGR-INGAVEFFNEMQGKGLKGNA 486
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
++++IR+ C + ++ A L +M+ G P V+ ++IS S+AG + A +L
Sbjct: 487 VTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSK 546
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M+ G PD+ ++ L++G+ +++EA E+L E + + VTY+TLI + K +
Sbjct: 547 MKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGD 606
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
F A +L+ +M G+ P V Y LI + CL + A K+ DM
Sbjct: 607 FSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNG-NLDEAMKIFRDM 652
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 146/328 (44%), Gaps = 5/328 (1%)
Query: 201 NELIALFSKLGKGKAAFEVFNKF-GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N LI K+G+ + + + C+ N TY I+ + + + A + ++M
Sbjct: 384 NTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMN 443
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G P+ + ++ CK G+ A + + K + LI + C +
Sbjct: 444 KDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIE 503
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
K A+++ D+ + ++I L + + A +LSKM G P FN +
Sbjct: 504 K-AMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVL 562
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I+ + + + A EMLK M + G+KPD TY L+S ++ G A ++ + K
Sbjct: 563 INGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGL 622
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG-VQPNVDEYNKLIQSLCLKALDWRTA 498
+ VTY LI YC D A+K+ +M V PN YN LI SLC K A
Sbjct: 623 VPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKN-QVDLA 681
Query: 499 EKLLEDMRLKGLHLNGIT-RALIRAVKE 525
L++DM++KG+ N T A+ + ++E
Sbjct: 682 LSLMDDMKVKGVKPNTNTFNAMFKGLQE 709
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 165/365 (45%), Gaps = 60/365 (16%)
Query: 206 LFSKLGK----GKAAFE-----VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+FS L K G+A E + +KF ++ N I L R D AW V
Sbjct: 235 VFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLH 294
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE-KKMYPPQSVVAF--LISSLC 313
+++ G + ++ +++ G+A+E + TL E K+M +VV F LI+ LC
Sbjct: 295 GLMKLGGVMEAASCNALLTAL---GRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLC 351
Query: 314 QEDETVKLALDMLDDFS-GEARKYAIKP----FSSVIRSLC-------------RMKD-- 353
+ V AL++ + + GE+ + ++P ++++I LC RM+
Sbjct: 352 KF-RRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQP 410
Query: 354 ---------------------VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
+ A+ L +M +G PP N+++ K G + A
Sbjct: 411 RCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGA 470
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
+E M+ +GLK + TYT L+ + N +E+A E+ +E + + Y+TLI G
Sbjct: 471 VEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISG 530
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK-ALDWRTAEKLLEDMRLKGLH 511
+ + D A +L++MK+ G P++ +N LI C K LD A ++L++M G+
Sbjct: 531 LSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLD--EAYEMLKEMENAGIK 588
Query: 512 LNGIT 516
+G+T
Sbjct: 589 PDGVT 593
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 99/231 (42%), Gaps = 2/231 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F + + A E+F++ + GC + YY I LS+ D A V KM E G
Sbjct: 492 LIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAG 551
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD +I+ FC+ K EA+ + + P LIS + + A
Sbjct: 552 FSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGD-FSTA 610
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP-PPGNAVFNSVIS 381
++ E + + ++I + C ++ A + M S PP ++N +I+
Sbjct: 611 HRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILIN 670
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+ + + A+ ++ M+ +G+KP+ T+ + G + +A E+++
Sbjct: 671 SLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMD 721
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 150/354 (42%), Gaps = 56/354 (15%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA-HVVYTLAREKK 297
I R ++ D ++ V ++ + L + +I + G+ +A H++ + + K
Sbjct: 166 IRCFGRAQMVDESFLVYNELCPSRRLTHIRNI--LIDVLFRKGRVDDALHLLDEMLQPKA 223
Query: 298 MYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA---IKP----FSSVIRSLCR 350
+PP S ++ S + + V A+D ++ G K+A + P + +I LCR
Sbjct: 224 EFPPNSNTGHIVFSALSKRDKVGRAVDE-EEIVGLVSKFAEHEVFPNSIWLTQLISRLCR 282
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
A +L ++ G A N++++A +A + +L M+ ++P+V T
Sbjct: 283 SGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVT 342
Query: 411 YTGLMSGYANGGQMEEACEI---------------------------------------L 431
+ L++ +++EA E+ L
Sbjct: 343 FGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGL 402
Query: 432 NEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
E ++ R P VTY+ LI GYCK + A +L ++M GV PNV N L+ +C
Sbjct: 403 VERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMC 462
Query: 490 LKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAVKELE--EDAIENGEALVEA 540
K A + +M+ KGL N +T ALIRA + E A+E + ++EA
Sbjct: 463 -KHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEA 515
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 105/255 (41%), Gaps = 18/255 (7%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL++A C+ ++ L+D + E G + + LI+ S+ GK A V +K
Sbjct: 491 ALIRAFCNVNNIEKAMELFDEMLEAGCSPDAI----VYYTLISGLSQAGKLDRASFVLSK 546
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ G + ++ I R+ D A+ + ++M G PD +IS F K G
Sbjct: 547 MKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGD 606
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIK 339
AH + ++ + P LI + C DE +K+ DM + +
Sbjct: 607 FSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDM-------SSTSKVP 659
Query: 340 P----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
P ++ +I SLCR V A +L+ M +G P FN++ + ++ A E+
Sbjct: 660 PNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFEL 719
Query: 396 LKLMRSRGLKPDVYT 410
+ M PD T
Sbjct: 720 MDRMTEHACNPDYIT 734
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 184/435 (42%), Gaps = 57/435 (13%)
Query: 148 NLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALF 207
+ +C K ++ +LL+ + S GK +++ V E + L +L + +
Sbjct: 111 HFLCTHKMLSEA--QSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVL---MNAY 165
Query: 208 SKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDS 267
+ G A + F + + + + L + + AW+ E++++ G PD
Sbjct: 166 TDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDV 225
Query: 268 EK-----------------------VGK------------IISWFCKGGKAKEAHVVYTL 292
K +GK +I+ +CK G + +
Sbjct: 226 CKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRF 285
Query: 293 AREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKP----FSSVI 345
E +++P + LI+ LC+E D+ KL L+M D + P F+++I
Sbjct: 286 MMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDR--------GLVPNDVTFTTLI 337
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
C + +M+ +G P +N++I+ K GD+ A +++ M RGLK
Sbjct: 338 NGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLK 397
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
PD +TYT L+ G G +E A EI E K L V + LI G+C+ + A +
Sbjct: 398 PDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERT 457
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRAVKE 525
L EM + G++P+ Y +I C K D +T KLL++M+ G H+ G+ +
Sbjct: 458 LREMLEAGIKPDDATYTMVIHGFCKKG-DVKTGFKLLKEMQCDG-HVPGVVTYNVLLNGL 515
Query: 526 LEEDAIENGEALVEA 540
++ ++N L++A
Sbjct: 516 CKQGQMKNANMLLDA 530
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 140/321 (43%), Gaps = 2/321 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N L+ K K A +F + G G ++ I + D + + M+
Sbjct: 228 FNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMM 287
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
E PD +I+ CK G+ +A+ ++ ++ + P LI+ C
Sbjct: 288 ENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGR-A 346
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
L +++ + K + ++++I LC++ D+ AK L+ +M G P + +
Sbjct: 347 DLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTML 406
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I K GD+ A+E+ K M G++ D +T L+SG+ GQ+ EA L E +
Sbjct: 407 IDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGI 466
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
+ TY +I G+CK + KLL EM+ G P V YN L+ LC K + A
Sbjct: 467 KPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLC-KQGQMKNAN 525
Query: 500 KLLEDMRLKGLHLNGITRALI 520
LL+ M G+ + IT ++
Sbjct: 526 MLLDAMLNLGVVPDDITYNIL 546
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 144/335 (42%), Gaps = 19/335 (5%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ +C E L+ + + G + TV N LI + K G F +
Sbjct: 229 NVLMHRLCKEHKINEAQLLFGEIGKRGLRP----TVVSFNTLINGYCKSGNLDQGFRLKR 284
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ + TY I L + D A + +M + G +P+ +I+ C G
Sbjct: 285 FMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTG 344
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED---ETVKLALDMLDDFSGEARKYAI 338
+A +Y K + P LI+ LC+ E KL ++M + +
Sbjct: 345 RADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEM--------TQRGL 396
Query: 339 KP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
KP ++ +I C+ D+ A + +M+ EG N F ++IS + + G + A
Sbjct: 397 KPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAER 456
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
L+ M G+KPD TYT ++ G+ G ++ ++L E + + VTY+ L+ G C
Sbjct: 457 TLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLC 516
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
K + A LL+ M ++GV P+ YN L++ C
Sbjct: 517 KQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHC 551
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 119/261 (45%), Gaps = 4/261 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K G+ A ++F + D G V N T+ I D + ++M+ G
Sbjct: 301 LINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKG 360
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD +I+ CK G +EA + ++ + P + LI C+E + ++ A
Sbjct: 361 VKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGD-LESA 419
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
L++ + E + F+++I CR V A+ L +M+ G P +A + VI
Sbjct: 420 LEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHG 479
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ K GD+ ++LK M+ G P V TY L++G GQM+ A +L+
Sbjct: 480 FCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPD 539
Query: 443 PVTYHTLIRGYCK---LEEFD 460
+TY+ L+ G+CK E+FD
Sbjct: 540 DITYNILLEGHCKHGNREDFD 560
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 75/177 (42%), Gaps = 21/177 (11%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS-EGPPPGNAVFNSVISAYSKAGDMTPAM 393
+ +I + ++ LC K + A++LL ++S +G ++VF SV+ A
Sbjct: 100 RLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEA----------- 148
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
RG ++ LM+ Y + G +A + +K++ ++ + L
Sbjct: 149 --------RGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRL 200
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
KL A E+ D G P+V ++N L+ LC K A+ L ++ +GL
Sbjct: 201 MKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLC-KEHKINEAQLLFGEIGKRGL 256
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 163/364 (44%), Gaps = 38/364 (10%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
++ +C + ++ + L+ +K +G V T IL I F K G + A +F +
Sbjct: 294 VITFLCHATKVEKAFLLFQEMKMVGVTPD-VYTYTIL---IDSFCKAGLIEQAQWLFEEM 349
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
GC TY I A + K A + +M++ G P+ G ++ CK G
Sbjct: 350 RSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNI 409
Query: 284 KEAHVVY------TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
+A VY + + + Y P C++ T LA +++
Sbjct: 410 SKAFEVYAKLIGTSDSADSDFYFP-----------CEDRHT--LAPNVVT---------- 446
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+ +++ LC+ V A LL M+S G P + V++++I + KAG + A E+
Sbjct: 447 ---YGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFL 503
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M G P V+TYT L+ G+++ A ++L++ K+ + VTY +I G C++
Sbjct: 504 QMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIG 563
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT- 516
E + ALKLL+ M++ G PNV Y LI L KA + L M KG N +T
Sbjct: 564 ESEKALKLLSLMEEKGCSPNVVTYTALIDGL-GKAGKIDLSLDLFTQMSRKGCSPNYVTY 622
Query: 517 RALI 520
R LI
Sbjct: 623 RVLI 626
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 126/317 (39%), Gaps = 11/317 (3%)
Query: 181 WDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIE 240
W ++ E+E L + +I+ + A ++ C+ N TY +
Sbjct: 91 WADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLS 150
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP 300
++K W + M+ G P+ ++ +C A+ + P
Sbjct: 151 GFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPP 210
Query: 301 PQSVVAFLISSLC-QEDETVKLALDMLDDFSGEA-------RKYAIKPFSSVIRSLCRMK 352
V I S+C QE LD+ + GE K + F+ R LC +
Sbjct: 211 GYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFA---RCLCGVG 267
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT 412
A L+ +M+ +G P + ++ VI+ A + A + + M+ G+ PDVYTYT
Sbjct: 268 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYT 327
Query: 413 GLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
L+ + G +E+A + E + + VTY LI Y K ++ A + + M D
Sbjct: 328 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 387
Query: 473 GVQPNVDEYNKLIQSLC 489
G +PN Y L+ LC
Sbjct: 388 GCRPNDVTYGALVDGLC 404
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 133/315 (42%), Gaps = 37/315 (11%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
N TY ++ L + D A + + M+ +G P+ +I FCK GK A V+
Sbjct: 443 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 502
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
+ P LI + +D + LA+ +L ++ + ++++I LCR
Sbjct: 503 LQMTKCGYLPSVHTYTSLIDRM-FKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 561
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ + A LLS M +G P + ++I KAG + ++++ M +G P+ T
Sbjct: 562 IGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVT 621
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK--------LEE---- 458
Y L++ G +++A +L E K+ + Y I+G+ K LEE
Sbjct: 622 YRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESY 681
Query: 459 ------------FDC---------ALKLLNEMKDV--GVQPNVDEYNKLIQSLCLKALDW 495
DC A++L EM +V V+ + D Y LIQ+LCL A
Sbjct: 682 GTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCL-ASQV 740
Query: 496 RTAEKLLEDMRLKGL 510
A +L +M +G
Sbjct: 741 EEAFRLYSEMTRRGF 755
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 129/293 (44%), Gaps = 13/293 (4%)
Query: 225 DYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAK 284
D+G ++ TY ++ LS D + V ++M E+G D VG CK G+
Sbjct: 33 DFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWA 92
Query: 285 EAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSV 344
+A + E++ + +V+ + S E A+ L + + + ++
Sbjct: 93 DALDMI----EREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTL 148
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
+ + K + K +++ M++EG P ++FNS++ +Y D A ++L M + G
Sbjct: 149 LSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGC 208
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR-------LSPVTYHTLIRGYCKLE 457
P Y + G G + + ++L+ A+K + L+ V R C +
Sbjct: 209 PPGYVVYN-IFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVG 267
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+FD A +L+ EM G P+ Y+K+I LC A A L ++M++ G+
Sbjct: 268 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLC-HATKVEKAFLLFQEMKMVGV 319
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 136/338 (40%), Gaps = 40/338 (11%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+ +C + + L D + G + + + + LI F K GK +A EVF +
Sbjct: 449 ALVDGLCKAHKVDHAHELLDAMLSSGCEPNHI----VYDALIDGFCKAGKIDSAQEVFLQ 504
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + + TY I+ + + D A V +M++ P+ +I C+ G+
Sbjct: 505 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGE 564
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+++A + +L EK P LI L + + + L+LD+ S + +
Sbjct: 565 SEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGK-IDLSLDLFTQMSRKGCSPNYVTYR 623
Query: 343 SVIRSLC-------------RMKDVHGAKTL--------------------LSKMISEGP 369
+I LC MK + K L L +M S G
Sbjct: 624 VLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGT 683
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMR--SRGLKPDVYTYTGLMSGYANGGQMEEA 427
P V+ +I +SKAG + AME+ K M +K D Y L+ Q+EEA
Sbjct: 684 VPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEA 743
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
+ +E + + LI+G +++++D AL+L
Sbjct: 744 FRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781
>gi|356554513|ref|XP_003545590.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Glycine max]
Length = 632
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 155/345 (44%), Gaps = 7/345 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+AL+ A S ++ + +KE G K N LI + GK + ++ +
Sbjct: 146 NALINAFAESGNMEDAKKVVQKMKESGLKPSAC----TYNTLIKGYGIAGKPDESMKLLD 201
Query: 222 KFGDYGCV-ANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
G V N +TY I AL + + AW+V KM +G PD I + + +
Sbjct: 202 LMSTEGNVKPNLKTYNMLIRALCKMENISEAWNVVYKMTASGMQPDVVTFNTIATAYAQN 261
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
GK +A + + + P + +IS C+E + V+ AL + + +
Sbjct: 262 GKTAQAEAMILEMQRNSLKPNERTCTIIISGYCREGK-VQEALRFVYRMKDLGMQPNLIV 320
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+S++ M D G +L M P ++++++A+S+AG + E+ M
Sbjct: 321 LNSLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTIMNAWSQAGFLEKCKEIYNNML 380
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G+KPD + Y+ L GY +ME+A E+L K+ + V + T+I G+C + D
Sbjct: 381 KSGVKPDAHAYSILAKGYVRAQEMEKAEEMLTVMTKSGVHPNVVIFTTVISGWCSVGRMD 440
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
A+++ ++M + GV PN+ + LI W+ AE +L+ M
Sbjct: 441 NAMRVFDKMGEFGVSPNLKTFETLIWGYAEAKQPWK-AEGMLQIM 484
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 145/295 (49%), Gaps = 12/295 (4%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+++N LI K GK + A +F + G + TY + AL+ +K F S+
Sbjct: 76 TKVMNILI----KSGKPQEAIVIFQNLIEGGHQPSLATYTTLLNALTTQKYFKPIHSIVS 131
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC--- 313
+ E PDS +I+ F + G ++A V +E + P LI
Sbjct: 132 LVEEKQMKPDSIFFNALINAFAESGNMEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAG 191
Query: 314 QEDETVKLALDMLDDFSGEAR-KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
+ DE++KL LD S E K +K ++ +IR+LC+M+++ A ++ KM + G P
Sbjct: 192 KPDESMKL----LDLMSTEGNVKPNLKTYNMLIRALCKMENISEAWNVVYKMTASGMQPD 247
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
FN++ +AY++ G A M+ M+ LKP+ T T ++SGY G+++EA +
Sbjct: 248 VVTFNTIATAYAQNGKTAQAEAMILEMQRNSLKPNERTCTIIISGYCREGKVQEALRFVY 307
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
K + + + ++L+ G+ + + D ++L M++ ++P+V Y+ ++ +
Sbjct: 308 RMKDLGMQPNLIVLNSLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTIMNA 362
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 83/153 (54%), Gaps = 1/153 (0%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
++ + V+ L + A + +I G P A + ++++A + P ++
Sbjct: 72 VRSRTKVMNILIKSGKPQEAIVIFQNLIEGGHQPSLATYTTLLNALTTQKYFKPIHSIVS 131
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
L+ + +KPD + L++ +A G ME+A +++ + K++ + S TY+TLI+GY
Sbjct: 132 LVEEKQMKPDSIFFNALINAFAESGNMEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAG 191
Query: 458 EFDCALKLLNEMKDVG-VQPNVDEYNKLIQSLC 489
+ D ++KLL+ M G V+PN+ YN LI++LC
Sbjct: 192 KPDESMKLLDLMSTEGNVKPNLKTYNMLIRALC 224
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 42/252 (16%)
Query: 272 KIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSG 331
K+++ K GK +EA V++ E P + L+++L
Sbjct: 77 KVMNILIKSGKPQEAIVIFQNLIEGGHQPSLATYTTLLNALT------------------ 118
Query: 332 EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
+KY KP S++ SL K + P + FN++I+A++++G+M
Sbjct: 119 -TQKY-FKPIHSIV-SLVEEKQMK---------------PDSIFFNALINAFAESGNMED 160
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN-EAKKNHSRLSPVTYHTLI 450
A ++++ M+ GLKP TY L+ GY G+ +E+ ++L+ + + + + + TY+ LI
Sbjct: 161 AKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPDESMKLLDLMSTEGNVKPNLKTYNMLI 220
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT--AEKLLEDMRLK 508
R CK+E A ++ +M G+QP+V +N + + A + +T AE ++ +M+
Sbjct: 221 RALCKMENISEAWNVVYKMTASGMQPDVVTFNTIATAY---AQNGKTAQAEAMILEMQRN 277
Query: 509 GLHLNGITRALI 520
L N T +I
Sbjct: 278 SLKPNERTCTII 289
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 136/281 (48%), Gaps = 8/281 (2%)
Query: 235 YYFTIEALSRRKIFDWAWSVCEKMIETGSL----PDSEKVGKIISWFCKGGKAKEAHVVY 290
+Y T+ +LS++ F+ V L P++ +I C G+ +A + +
Sbjct: 91 HYHTVLSLSQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFH 150
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
Q LI LC+ ET + ALD+L G + + +S++I +C+
Sbjct: 151 DNVVAMGFQLDQVGYGTLIHGLCKVGET-RAALDLLRRVDGNLVQPNVVMYSTIIDGMCK 209
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
K V+ A L S+M+S+G P ++++IS + G + A+++ M +KPDVYT
Sbjct: 210 DKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYT 269
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
+ L+ G+ G+M+E + K + + VTY +L+ GYC ++E + A +L M
Sbjct: 270 FNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMS 329
Query: 471 DVGVQPNVDEYNKLIQSLC-LKALDWRTAEKLLEDMRLKGL 510
GV P++ YN LI C +K +D A L ++M K +
Sbjct: 330 QRGVNPDIQSYNILIDGFCKIKKVD--EAMNLFKEMHHKHI 368
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 148/319 (46%), Gaps = 20/319 (6%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K+G+ +AA ++ + N Y I+ + + K + A+ + +M+ G
Sbjct: 168 LIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKG 227
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV--K 320
P+ +IS F G+ K+A ++ + + P L+ C++ + K
Sbjct: 228 ISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGK 287
Query: 321 LALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
M+ K IKP + S++ C +K+V+ AK++L M G P +
Sbjct: 288 TVFAMM-------MKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSY 340
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N +I + K + AM + K M + + PDV TY L+ G G++ A ++++E
Sbjct: 341 NILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEM-- 398
Query: 437 NHSRLSP---VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
H R P +TY +++ CK + D A+ LL ++KD G++PN+ Y LI LC K
Sbjct: 399 -HDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLC-KGG 456
Query: 494 DWRTAEKLLEDMRLKGLHL 512
A + ED+ +KG ++
Sbjct: 457 RLEDAHNIFEDLLVKGYNI 475
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 171/355 (48%), Gaps = 15/355 (4%)
Query: 158 SGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGV-LTVEILNELIALFSKLGKGKAA 216
S ++D + K K V +D+ E+ KG+ V + LI+ F +G+ K A
Sbjct: 201 STIIDGMCK-------DKHVNDAFDLYSEM--VSKGISPNVVTYSALISGFFTVGQLKDA 251
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
++FNK + T+ ++ + +V M++ G P+ ++
Sbjct: 252 IDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDG 311
Query: 277 FCKGGKAKEAH-VVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
+C + +A ++YT++ ++ + P LI C+ + V A+++ + +
Sbjct: 312 YCLVKEVNKAKSILYTMS-QRGVNPDIQSYNILIDGFCKI-KKVDEAMNLFKEMHHKHII 369
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+ ++S+I LC++ + A L+ +M G PP ++S++ A K + A+ +
Sbjct: 370 PDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIAL 429
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
L ++ +G++P++YTYT L+ G GG++E+A I + ++ TY +I G+C
Sbjct: 430 LTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCN 489
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
FD AL LL++MKD P+ Y +I+SL K + + AEKL E M +GL
Sbjct: 490 KGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDK-AEKLRE-MITRGL 542
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 122/256 (47%), Gaps = 2/256 (0%)
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALD 324
P+ II CK +A +Y+ K + P + LIS + +K A+D
Sbjct: 195 PNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQ-LKDAID 253
Query: 325 MLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
+ + E K + F+ ++ C+ + KT+ + M+ +G P + S++ Y
Sbjct: 254 LFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYC 313
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV 444
++ A +L M RG+ PD+ +Y L+ G+ +++EA + E H V
Sbjct: 314 LVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVV 373
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLED 504
TY++LI G CKL + ALKL++EM D GV P++ Y+ ++ +LC K A LL
Sbjct: 374 TYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALC-KNHQVDKAIALLTK 432
Query: 505 MRLKGLHLNGITRALI 520
++ +G+ N T ++
Sbjct: 433 LKDQGIRPNMYTYTIL 448
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 132/294 (44%), Gaps = 2/294 (0%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G N T+ I+ L + A + ++ G D G +I CK G+ + A
Sbjct: 122 GYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAA 181
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
+ + P + + +I +C+ D+ V A D+ + + + +S++I
Sbjct: 182 LDLLRRVDGNLVQPNVVMYSTIIDGMCK-DKHVNDAFDLYSEMVSKGISPNVVTYSALIS 240
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
+ + A L +KMI E P FN ++ + K G M + +M +G+KP
Sbjct: 241 GFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKP 300
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
+V TY LM GY ++ +A IL + +Y+ LI G+CK+++ D A+ L
Sbjct: 301 NVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLF 360
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
EM + P+V YN LI LC K A KL+++M +G+ + IT + I
Sbjct: 361 KEMHHKHIIPDVVTYNSLIDGLC-KLGKISYALKLVDEMHDRGVPPDIITYSSI 413
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 94/212 (44%), Gaps = 20/212 (9%)
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
P+SS+ + DV A +L S+++ + P P FN ++ + K+ + + + M
Sbjct: 43 PYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQM 102
Query: 400 RSRGLKPDVY----------------TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
G+ P ++ T+T L+ G GQ+ +A + +L
Sbjct: 103 EFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQ 162
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
V Y TLI G CK+ E AL LL + VQPNV Y+ +I +C K A L
Sbjct: 163 VGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMC-KDKHVNDAFDLYS 221
Query: 504 DMRLKGLHLNGIT-RALIRAVKELEE--DAIE 532
+M KG+ N +T ALI + + DAI+
Sbjct: 222 EMVSKGISPNVVTYSALISGFFTVGQLKDAID 253
>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
Length = 690
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 159/346 (45%), Gaps = 15/346 (4%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGD--YGCVANQETYYFTIEALSRRKIFDWAWSV 254
V LN ++ K G+ + A + +GC N TY I+A R A+ +
Sbjct: 209 VVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYEL 268
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS-----VVAFLI 309
EKM G + + I+ C+ G+ A + REK+ P+ + L+
Sbjct: 269 VEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFF---REKRTVWPEGKGNAVTYSTLV 325
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
+L + V +A+++ + E + ++I L + + A ++ S M G
Sbjct: 326 GALLHTN-NVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGF 384
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
+N +I+ + + + A E+L+ M+ G++PDV TY L+SG G E
Sbjct: 385 KLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDE 444
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+L + + + S +T+ TL+ GYCK+ + D AL++L M + G+ PN YN LI LC
Sbjct: 445 LLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLC 504
Query: 490 LKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAV--KELEEDAIE 532
+ D A +L ++M+ K + N T AL++ + K + E A E
Sbjct: 505 KRG-DVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFE 549
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 126/257 (49%), Gaps = 8/257 (3%)
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY--PPQSVV-AFLISSLCQEDETVKL 321
PD + ++ CK G+ +EA + + R ++ PP +V LI + C+ + +
Sbjct: 207 PDVVTLNTVVDGLCKSGRVQEA-LAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVG-NISM 264
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP-PGNAV-FNSV 379
A ++++ E I ++++ LCR A + + P GNAV ++++
Sbjct: 265 AYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTL 324
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+ A ++ AME+ S G PD Y ++SG G++E+AC + + K+
Sbjct: 325 VGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGF 384
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
+L Y+ LI G+C+ + A +LL EMK+VG++P+V YN L+ C KA D+ +
Sbjct: 385 KLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSC-KAGDFAAVD 443
Query: 500 KLLEDMRLKGLHLNGIT 516
+LL M G + IT
Sbjct: 444 ELLGKMIDDGCQPSVIT 460
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 140/316 (44%), Gaps = 15/316 (4%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ A C VG + +++V+++ E E + LN ++ + G+ AA E F
Sbjct: 250 NCLIDAFCR-VGN--ISMAYELVEKM-ENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFR 305
Query: 222 KFGDY--GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
+ N TY + AL A + + + G PD+ +IS +
Sbjct: 306 EKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQ 365
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
G+ ++A + + +E LI+ C++ + + A ++L E ++ I+
Sbjct: 366 AGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRK-KRLHEAYELLQ----EMKEVGIR 420
Query: 340 P----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
P +++++ C+ D LL KMI +G P F +++ Y K G + A+ +
Sbjct: 421 PDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRI 480
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
L+ M G+ P+ Y L+ G ++ A E+ +E K+ + T++ L++G
Sbjct: 481 LRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRD 540
Query: 456 LEEFDCALKLLNEMKD 471
+ A +L+++M++
Sbjct: 541 KNMPEKAFELMDQMRE 556
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 77/154 (50%), Gaps = 5/154 (3%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMIS-EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
F+S++ +L R++DV G + + M P + +++ KAG + A+ +L M
Sbjct: 139 FNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGM 198
Query: 400 RSRGL--KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCK 455
+ L +PDV T ++ G G+++EA + + + P VTY+ LI +C+
Sbjct: 199 SRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCR 258
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ A +L+ +M++ GV N+ N ++ LC
Sbjct: 259 VGNISMAYELVEKMENEGVPQNIVTLNTIVGGLC 292
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRS-RGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
FNS+++A ++ D+ + LM+ ++PDV TY L++G G++ +A +L+
Sbjct: 139 FNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGM 198
Query: 435 KKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNE-MKDV-GVQPNVDEYNKLIQSLCL 490
+ + P VT +T++ G CK AL + + M V G PN YN LI + C
Sbjct: 199 SRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFC- 257
Query: 491 KALDWRTAEKLLEDMRLKG-----LHLNGITRALIRA 522
+ + A +L+E M +G + LN I L RA
Sbjct: 258 RVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRA 294
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 141/316 (44%), Gaps = 2/316 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N ++ GK K A EV ++ C + TY IEA + A + ++M +
Sbjct: 216 NTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRD 275
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD +I+ CK G+ EA P ++ S+C +
Sbjct: 276 KGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMD 335
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A L + + ++ F+ +I LCR + A +L KM G P + +N ++
Sbjct: 336 -AEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLL 394
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
A K M A+E L +M SRG PD+ TY L++ G+++ A EILN+
Sbjct: 395 HALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCS 454
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+TY+T+I G K+ + D A+KLL+EMK G++P++ Y+ L+ L + A
Sbjct: 455 PVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREG-KVDEAIA 513
Query: 501 LLEDMRLKGLHLNGIT 516
D+ G+ N IT
Sbjct: 514 FFHDLEEMGVKPNAIT 529
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 162/347 (46%), Gaps = 6/347 (1%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
L++A C G + L D +++ G K V N LI K G+ A N
Sbjct: 253 LIEATCKESGVGQAMKLLDEMRDKGCKPD----VVTYNVLINGICKEGRLDEAIRFLNHM 308
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
YGC N T+ + ++ + A +MI G P +I++ C+ G
Sbjct: 309 PSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLI 368
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
A V + P L+ +LC+ D+ ++ A++ LD I +++
Sbjct: 369 GRAIDVLEKMPQHGCTPNSLSYNPLLHALCK-DKKMERAIEYLDIMVSRGCYPDIVTYNT 427
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
++ +LC+ V A +L+++ S+G P +N+VI SK G A+++L M+ +G
Sbjct: 428 LLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKG 487
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
LKPD+ TY+ L+ G + G+++EA ++ ++ + + +TY++++ G CK + A+
Sbjct: 488 LKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAI 547
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
L M G +P Y LI+ L + L + A +LL ++ +G+
Sbjct: 548 DFLAYMVARGCKPTETSYMILIEGLAYEGL-AKEALELLNELCSRGV 593
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 125/278 (44%), Gaps = 5/278 (1%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
+ L R + + E M+ G +PD +I CK GK +A V + +
Sbjct: 117 LRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGA 176
Query: 299 YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
P LIS C+ E + AL +LD S + +++++R+LC + A
Sbjct: 177 VPDVITYNVLISGYCKTGE-IGSALQLLDRMSVSP---DVVTYNTILRTLCDSGKLKEAM 232
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+L + + P + +I A K + AM++L MR +G KPDV TY L++G
Sbjct: 233 EVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGI 292
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G+++EA LN + + +T++ ++R C + A K L EM G P+V
Sbjct: 293 CKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSV 352
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+N LI LC K L R A +LE M G N ++
Sbjct: 353 VTFNILINFLCRKGLIGR-AIDVLEKMPQHGCTPNSLS 389
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 3/113 (2%)
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N+ + + G++ + L+ M RG PD+ T L+ G G+ +A ++ +
Sbjct: 114 NNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILED 173
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + +TY+ LI GYCK E AL+LL+ M V P+V YN ++++LC
Sbjct: 174 SGAVPDVITYNVLISGYCKTGEIGSALQLLDRMS---VSPDVVTYNTILRTLC 223
>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
Length = 1302
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 151/326 (46%), Gaps = 7/326 (2%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
E++ ++ FS++G+ A + + G + T +E + ++A +V ++
Sbjct: 749 EVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDE 808
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M G +PDS ++ + GK +EA T ++ P + ++++LC E+
Sbjct: 809 MSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALC-ENG 867
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
V A+ K + F+S+I LC+ + A +L +M+ G P
Sbjct: 868 LVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHT 927
Query: 378 SVISAYSKAGDMTPAMEM-LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
++I K G A + LKL+RS KP+V+TYT ++ GY ++ A + + K+
Sbjct: 928 ALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKE 987
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ TY TLI G+CK F A +L+N M D G PN+ YN I SLC K+ R
Sbjct: 988 QGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKS---R 1044
Query: 497 TAE--KLLEDMRLKGLHLNGITRALI 520
E +LL GL +G+T ++
Sbjct: 1045 APEAYELLNKAFSCGLEADGVTYTIL 1070
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 110/263 (41%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G + + T + AL + + A KMI+ G P+ +I CK G K+A
Sbjct: 848 GFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQA 907
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
+ P LI LC+ T K L + K + ++S+I
Sbjct: 908 FEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIG 967
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
C+ ++ A+ L S+M +G P + ++I+ + KAG A E++ LM G P
Sbjct: 968 GYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMP 1027
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
++YTY + + EA E+LN+A VTY LI+ CK + + AL
Sbjct: 1028 NIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFF 1087
Query: 467 NEMKDVGVQPNVDEYNKLIQSLC 489
M G + ++ N LI + C
Sbjct: 1088 CRMNKTGFEADMRLNNILIAAFC 1110
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 129/309 (41%), Gaps = 35/309 (11%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K G K AFE+ + G N T+ I+ L +R + A+ + K++ +
Sbjct: 894 LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD 953
Query: 263 SL-PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE------ 315
+ P+ +I +CK K A ++++ +E+ ++P + LI+ C+
Sbjct: 954 TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRA 1013
Query: 316 --------DE-------TVKLALDMLDDFSGEARKYAI--KPFSS-----------VIRS 347
DE T A+D L S Y + K FS +I+
Sbjct: 1014 YELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQE 1073
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
C+ D++ A +M G + N +I+A+ + M + + +L+ S GL P
Sbjct: 1074 QCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPT 1133
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
TYT ++S Y G ++ A + + K++ TY +LI G CK D A KL
Sbjct: 1134 KETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYE 1193
Query: 468 EMKDVGVQP 476
M D G+ P
Sbjct: 1194 AMIDRGLSP 1202
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 141/327 (43%), Gaps = 3/327 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V I N +I K A +F + G N TY I L + A +
Sbjct: 222 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 281
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
MIE P+ +I F K GK EA +Y ++ + P L++ C D
Sbjct: 282 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHD 341
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
K A M + + + ++++I+ C+ K V L +M G +
Sbjct: 342 RLDK-AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 400
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
++I GD A ++ K M S G+ PD+ TY+ L+ G N G++E+A E+ + +K
Sbjct: 401 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 460
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ +L Y T+I G CK + D L + GV+PNV YN +I LC K L +
Sbjct: 461 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL-LQ 519
Query: 497 TAEKLLEDMRLKG-LHLNGITRALIRA 522
A LL+ M+ G L +G LIRA
Sbjct: 520 EAYALLKKMKEDGPLPNSGTYNTLIRA 546
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 134/283 (47%), Gaps = 10/283 (3%)
Query: 248 FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA-REKKMYPPQSVVA 306
D A + M+++ LP + K++S K K+ VV +L + +++ +
Sbjct: 28 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAI---AKMKKFDVVISLGEKMQRLEIVHGLYT 84
Query: 307 F--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM 364
+ LI+ C+ + + LAL +L + +I SS++ C K + A L+ +M
Sbjct: 85 YNILINCFCRRSQ-ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 143
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
+ G P F ++I + A+ ++ M RG +P++ TY +++G G
Sbjct: 144 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 203
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
+ A +LN+ + V ++T+I CK D AL L EM+ G++PNV Y+ L
Sbjct: 204 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 263
Query: 485 IQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRA-VKE 525
I LC W A +LL DM K ++ N +T ALI A VKE
Sbjct: 264 ISCLCSYG-RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 305
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 132/291 (45%), Gaps = 1/291 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N+L++ +K+ K + K V TY I RR A ++ KM+
Sbjct: 50 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 109
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G P + +++ +C G + +A + E P LI L ++
Sbjct: 110 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 169
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
+ A+ ++D + + + V+ LC+ D A LL+KM + +FN++
Sbjct: 170 E-AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 228
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I + K + A+ + K M ++G++P+V TY+ L+S + G+ +A ++L++ +
Sbjct: 229 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 288
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
+ VT++ LI + K +F A KL ++M + P++ YN L+ C+
Sbjct: 289 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCM 339
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 107/227 (47%), Gaps = 2/227 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI F K + + E+F + G V + TY I+ L D A V ++M+
Sbjct: 366 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 425
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD ++ C GK ++A V+ ++ ++ + +I +C+ + V
Sbjct: 426 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK-VD 484
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
D+ S + K + ++++I LC + + A LL KM +GP P + +N++I
Sbjct: 485 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 544
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
A+ + GD + E+++ MRS D T GL++ + G+++++
Sbjct: 545 RAHLRDGDKAASAELIREMRSCRFVGDAST-IGLVANMLHDGRLDKS 590
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/303 (19%), Positives = 123/303 (40%), Gaps = 36/303 (11%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI+ G+ A ++ + + N T+ I+A + F A + + MI+
Sbjct: 263 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 322
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD +++ FC + +A ++ K +P LI C+ + V+
Sbjct: 323 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKS-KRVEDG 381
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++ + S ++++I+ L D A+ + +M+S+G PP ++ ++
Sbjct: 382 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 441
Query: 383 YSKAGDMTPAMEMLKLMRS-----------------------------------RGLKPD 407
G + A+E+ M+ +G+KP+
Sbjct: 442 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 501
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
V TY ++SG + ++EA +L + K++ + TY+TLIR + + + + +L+
Sbjct: 502 VVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIR 561
Query: 468 EMK 470
EM+
Sbjct: 562 EMR 564
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 7/164 (4%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
LL +C++ ++ ++D + +K + L + I +I K GK +++F
Sbjct: 438 LLDGLCNNGKLEKALEVFDYM----QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 493
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK-GGK 282
G N TY I L +++ A+++ +KM E G LP+S +I + G K
Sbjct: 494 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDK 553
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
A A ++ + R + S + L++++ + K LDML
Sbjct: 554 AASAELIREM-RSCRFVGDASTIG-LVANMLHDGRLDKSFLDML 595
>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 662
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 129/499 (25%), Positives = 208/499 (41%), Gaps = 44/499 (8%)
Query: 10 RLVARNFGVAT-EKVHCSQTLSLNISRSLSKPSLYRSSRFLSESPAANPKDESSFSPETD 68
R + F +A + HCS S+SL LY++ FLS+ P S S
Sbjct: 3 RFYRKPFSLALLNRPHCS-------SQSLC---LYKNGDFLSDDSKCLPLSSSRTSVRWV 52
Query: 69 FSSRSFGENEYAQMDPSADAVESKEEEAYEIDGDKLENVLSLLQSSVDGYLESSLDSF-- 126
F+S S E+ ++P D + + + +L+LL S +ES+LD F
Sbjct: 53 FNSSSLPPPEW--IEPFNDVSDLVKSNRNLQPSPWVSQILNLLDGSAS--MESNLDGFCR 108
Query: 127 --ELDLHEDFVLKVLETPLVLGENLVC--FFKW------------VTSGVVDALLKAICS 170
+ L +FV VL++ + + + FF W +VD L A
Sbjct: 109 KFLIKLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALA--- 165
Query: 171 SVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVA 230
K+V + I EI K + +TV N LI F KLG + V+ K + G
Sbjct: 166 ----KDVDRIRFICSEI-RKFEFPMTVSPGNSLIKSFGKLGMVEELLWVWRKMKENGIEP 220
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL-PDSEKVGKIISWFCKGGKAKEAHVV 289
TY F + L D A V E M E+G + PD +I +CK G+ ++A
Sbjct: 221 TLYTYNFLMNGLVSAMFVDSAERVFEVM-ESGRIKPDVVTYNTMIKGYCKAGQTQKALEK 279
Query: 290 YTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLC 349
+ K + + +I + C D + + + + + FS VI LC
Sbjct: 280 LRVMETKGLEADKITYMTMIQA-CYADSDFSSCVALYQEMDEKGLQVPPHAFSLVIGGLC 338
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
+ ++ + MI +G P A++ +I Y+K G + A+ +L M G PDV
Sbjct: 339 KEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVV 398
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
TY+ +++G G++EEA + + N ++ + Y +LI G K D A +L EM
Sbjct: 399 TYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEM 458
Query: 470 KDVGVQPNVDEYNKLIQSL 488
+ G + YN LI +
Sbjct: 459 SEKGCTRDSYCYNALIDAF 477
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 120/292 (41%), Gaps = 16/292 (5%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGK-IISWFCKGGKAKEAHVV 289
N E Y ++ L+ K D +C + I P + G +I F K G +E V
Sbjct: 151 NLECYVSLVDVLALAKDVDRIRFICSE-IRKFEFPMTVSPGNSLIKSFGKLGMVEELLWV 209
Query: 290 YTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVI 345
+ +E + P FL++ L + +D + IKP ++++I
Sbjct: 210 WRKMKENGIEPTLYTYNFLMNGLVS-----AMFVDSAERVFEVMESGRIKPDVVTYNTMI 264
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
+ C+ A L M ++G + ++I A D + + + + M +GL+
Sbjct: 265 KGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKGLQ 324
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
+ ++ ++ G G++ E + + S+ + Y LI GY K + A++L
Sbjct: 325 VPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRL 384
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL--LEDMRLKGLHLNGI 515
L+ M D G P+V Y+ ++ LC R E + + R GL +N +
Sbjct: 385 LHRMIDEGFNPDVVTYSVVVNGLCKNG---RVEEAMDYFQTCRFNGLAINSM 433
Score = 41.6 bits (96), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 99/232 (42%), Gaps = 17/232 (7%)
Query: 209 KLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSE 268
K G+ + A + F G N Y I+ L + D A + E+M E G DS
Sbjct: 409 KNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSY 468
Query: 269 KVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQE---DETVKLAL 323
+I F K GK EA ++ E++ Q+V + LIS + +E +E +KL
Sbjct: 469 CYNALIDAFTKHGKVDEALALFKRMEEEEGC-DQTVYTYTILISGMFKEHRNEEALKLWD 527
Query: 324 DMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG---NAVFNSVI 380
M+D I P ++ +R+L + G K++ E P G +A +I
Sbjct: 528 MMIDK--------GITPTAACLRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMI 579
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+ KAG + A ++ + RG + T +++ G+ + A ++++
Sbjct: 580 NTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLMH 631
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 158/330 (47%), Gaps = 11/330 (3%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +IA + G+G A EVF++ + + N TY I+ + + +S+ ++M+
Sbjct: 200 NVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVC 259
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P++ ++S C+ G+ E + +KM P + L L + ++
Sbjct: 260 HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKA 319
Query: 321 LALDMLDDFSGEARKYAIK----PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
ML F G++ K + S ++ LC+ V A+ +L +++ G P ++
Sbjct: 320 ----MLSLF-GKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIY 374
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N++I+ Y + G++ A M+SR +KPD TY L++G ++ A ++L E +
Sbjct: 375 NTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQD 434
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
N + T++TLI Y + + + +L+EM++ G++PNV Y ++ + C K
Sbjct: 435 NGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFC-KNGKIP 493
Query: 497 TAEKLLEDMRLKGLHLNG-ITRALIRAVKE 525
A +L+DM K + N + A+I A E
Sbjct: 494 EAVAILDDMFHKDVLPNAQVYNAIIDAYVE 523
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 160/386 (41%), Gaps = 42/386 (10%)
Query: 139 LETPLVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVE 198
LE L + +VC + + LL +C + E AL D + G T
Sbjct: 247 LEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDG-FTYS 305
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
IL + + S+ G KA +F K G T + L + A V + +
Sbjct: 306 ILFDGL---SRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSL 362
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+ G +P +I+ +C+ G+ + A + + + + P LI+ LC+ +
Sbjct: 363 VNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERI 422
Query: 319 VK---LALDMLDD--------FS-------------------GEARKYAIKP----FSSV 344
L ++M D+ F+ E ++ +KP + S+
Sbjct: 423 TNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSI 482
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
+ + C+ + A +L M + P V+N++I AY + G A +++ M+S G+
Sbjct: 483 VNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGI 542
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCA 462
P + TY L+ G N Q+ EA EI+N + NH RL P V+Y+TLI C D A
Sbjct: 543 SPSIVTYNLLIKGLCNQSQISEAEEIIN-SLSNH-RLIPDAVSYNTLISACCYRGNIDKA 600
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSL 488
L L M G++ V Y++LI L
Sbjct: 601 LDLQQRMHKYGIKSTVRTYHQLISGL 626
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 130/293 (44%), Gaps = 9/293 (3%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L++ + G+ + ++ V + TY + LSR S+ K ++
Sbjct: 270 NVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLK 329
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G +++ CK GK A V + P + + LI+ CQ E
Sbjct: 330 NGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGE--- 386
Query: 321 LALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
L+ G+ + IKP ++++I LC+ + + A+ LL +M G P F
Sbjct: 387 --LEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETF 444
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N++I AY + G + +L M+ GLKP+V +Y +++ + G++ EA IL++
Sbjct: 445 NTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFH 504
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ Y+ +I Y + D A L+ +MK G+ P++ YN LI+ LC
Sbjct: 505 KDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLC 557
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 112/255 (43%), Gaps = 1/255 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI K + A ++ + D G ET+ I+A R + + V +M E
Sbjct: 410 NALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQE 469
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ G I++ FCK GK EA + K + P V +I + + +
Sbjct: 470 NGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQ 529
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A +++ +I ++ +I+ LC + A+ +++ + + P +N++I
Sbjct: 530 -AFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLI 588
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
SA G++ A+++ + M G+K V TY L+SG G++ E + + +N+
Sbjct: 589 SACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVV 648
Query: 441 LSPVTYHTLIRGYCK 455
S ++ ++ Y K
Sbjct: 649 PSNAIHNIMVEAYSK 663
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 34/224 (15%)
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLC-----------RMKDVHGAKTLLSKMISEGPP 370
AL +L D + EAR P S+ S C R DV A +L+ S G
Sbjct: 107 ALRLLSDLADEARA----PLPSL--SSCNLLLEALLSLGRHADVRRAFGILA---SAGAR 157
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLM-RSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
P +N + A AGD+ A+ ML+ M R P+ ++Y +++G G+ +A E
Sbjct: 158 PDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVE 217
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ +E + + +TY+T+I G+ K + + L ++M G++PN YN L+ LC
Sbjct: 218 VFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLC 277
Query: 490 LKA--------LDWRTAEKLLED-----MRLKGLHLNGITRALI 520
LD ++K++ D + GL NG ++A++
Sbjct: 278 RAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAML 321
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 105/273 (38%), Gaps = 40/273 (14%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGV-LTVEILNELIALFSKLGKGKAAFEVF 220
+AL+ +C + + + D++ E+ ++ GV TVE N LI + + G+ + F V
Sbjct: 410 NALINGLCKA---ERITNAQDLLMEM--QDNGVNPTVETFNTLIDAYGRTGQLEKCFIVL 464
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
++ + G N +Y + A + A ++ + M LP+++ II + +
Sbjct: 465 SEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEH 524
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE----------------------- 317
G +A ++ + + P LI LC + +
Sbjct: 525 GPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSY 584
Query: 318 -----------TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
+ ALD+ K ++ + +I L + + L KM+
Sbjct: 585 NTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQ 644
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
P NA+ N ++ AYSK G+ A ++ K M
Sbjct: 645 NNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 677
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 68/184 (36%), Gaps = 35/184 (19%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++ VI + R A + +M P + +N++I + K GD+ + M
Sbjct: 199 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMV 258
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNE--------------------------- 433
GLKP+ TY L+SG G+M E +L+E
Sbjct: 259 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 318
Query: 434 --------AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
+ KN + T L+ G CK + A ++L + + G+ P YN LI
Sbjct: 319 AMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 378
Query: 486 QSLC 489
C
Sbjct: 379 NGYC 382
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 186/415 (44%), Gaps = 18/415 (4%)
Query: 118 YLESSLDSFELDLHEDFVLKVLETPLVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEV 177
+L LD ++ L ++VLK++E + G + +GV+ L K V + E
Sbjct: 190 HLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPN---PYTYNGVILLLCKT--GKVAEAE- 243
Query: 178 YALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYF 237
L +++ E G GV I LI F KLG +A+ +F++ + TY
Sbjct: 244 RVLREMISE-GIAPDGV----IYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTA 298
Query: 238 TIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKK 297
I L + A + +M+ PD +I +CK GK KEA ++ +
Sbjct: 299 VICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMG 358
Query: 298 MYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGA 357
+ P L LC+ E V A ++L + + + I ++S++ LC+ ++ A
Sbjct: 359 LTPNIVTYTALADGLCKCGE-VDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQA 417
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
L+ M G P + +++ AY K+ +M A E+L+ M R L+P V T+ LM+G
Sbjct: 418 VKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNG 477
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
+ G +E+ ++L + + TY++LI+ YC ++ M GV P+
Sbjct: 478 FCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPD 537
Query: 478 VDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL-----NGITRALIRAVKELE 527
+ YN LI+ C KA + + A L DM KG +L N + + + K LE
Sbjct: 538 GNTYNILIKGHC-KARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLE 591
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 114/218 (52%), Gaps = 11/218 (5%)
Query: 307 FLISSLCQEDETVKLAL--DMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTL 360
IS L ++ + +K+AL + + E + +KP ++ VI LC+ V A+ +
Sbjct: 186 LFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERV 245
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
L +MISEG P ++ ++I + K G+++ A + M+ R + PD TYT ++ G
Sbjct: 246 LREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQ 305
Query: 421 GGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G++ EA ++ +E RL P VTY LI GYCK + A L N+M +G+ PN+
Sbjct: 306 TGRVMEADKLFHEMV--CKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNI 363
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
Y L LC K + TA +LL +M KGL LN T
Sbjct: 364 VTYTALADGLC-KCGEVDTANELLHEMCRKGLELNIYT 400
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 121/280 (43%), Gaps = 1/280 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + K GK K AF + N+ G N TY + L + D A + +M G
Sbjct: 334 LIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKG 393
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+ +++ CK G +A + +P L+ + C+ E V+ A
Sbjct: 394 LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVR-A 452
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++L + + F+ ++ C + + LL M+ +G P +NS+I
Sbjct: 453 HELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQ 512
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y +M E+ + M ++G+ PD TY L+ G+ M+EA + + L+
Sbjct: 513 YCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLT 572
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
+Y+ LI+G+ K ++F A +L +M+ G+ + + YN
Sbjct: 573 VSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYN 612
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 141/327 (43%), Gaps = 3/327 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V I N +I K A +F + G N TY I L + A +
Sbjct: 260 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 319
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
MIE P+ +I F K GK EA +Y ++ + P L++ C D
Sbjct: 320 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHD 379
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
K A M + + + ++++I+ C+ K V L +M G +
Sbjct: 380 RLDK-AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 438
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
++I GD A ++ K M S G+ PD+ TY+ L+ G N G++E+A E+ + +K
Sbjct: 439 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 498
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ +L Y T+I G CK + D L + GV+PNV YN +I LC K L +
Sbjct: 499 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL-LQ 557
Query: 497 TAEKLLEDMRLKG-LHLNGITRALIRA 522
A LL+ M+ G L +G LIRA
Sbjct: 558 EAYALLKKMKEDGPLPNSGTYNTLIRA 584
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 134/283 (47%), Gaps = 10/283 (3%)
Query: 248 FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA-REKKMYPPQSVVA 306
D A + M+++ LP + K++S K K+ VV +L + +++ +
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAI---AKMKKFDVVISLGEKMQRLEIVHGLYT 122
Query: 307 F--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM 364
+ LI+ C+ + + LAL +L + +I SS++ C K + A L+ +M
Sbjct: 123 YNILINCFCRRSQ-ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
+ G P F ++I + A+ ++ M RG +P++ TY +++G G
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
+ A +LN+ + V ++T+I CK D AL L EM+ G++PNV Y+ L
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 485 IQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRA-VKE 525
I LC W A +LL DM K ++ N +T ALI A VKE
Sbjct: 302 ISCLCSYG-RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 343
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 132/291 (45%), Gaps = 1/291 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N+L++ +K+ K + K V TY I RR A ++ KM+
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G P + +++ +C G + +A + E P LI L ++
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
+ A+ ++D + + + V+ LC+ D A LL+KM + +FN++
Sbjct: 208 E-AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 266
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I + K + A+ + K M ++G++P+V TY+ L+S + G+ +A ++L++ +
Sbjct: 267 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 326
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
+ VT++ LI + K +F A KL ++M + P++ YN L+ C+
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCM 377
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 107/227 (47%), Gaps = 2/227 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI F K + + E+F + G V + TY I+ L D A V ++M+
Sbjct: 404 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 463
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD ++ C GK ++A V+ ++ ++ + +I +C+ + V
Sbjct: 464 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK-VD 522
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
D+ S + K + ++++I LC + + A LL KM +GP P + +N++I
Sbjct: 523 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
A+ + GD + E+++ MRS D T GL++ + G+++++
Sbjct: 583 RAHLRDGDKAASAELIREMRSCRFVGDAST-IGLVANMLHDGRLDKS 628
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/303 (19%), Positives = 123/303 (40%), Gaps = 36/303 (11%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI+ G+ A ++ + + N T+ I+A + F A + + MI+
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD +++ FC + +A ++ K +P LI C+ + V+
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKS-KRVEDG 419
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++ + S ++++I+ L D A+ + +M+S+G PP ++ ++
Sbjct: 420 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Query: 383 YSKAGDMTPAMEMLKLMRS-----------------------------------RGLKPD 407
G + A+E+ M+ +G+KP+
Sbjct: 480 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 539
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
V TY ++SG + ++EA +L + K++ + TY+TLIR + + + + +L+
Sbjct: 540 VVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIR 599
Query: 468 EMK 470
EM+
Sbjct: 600 EMR 602
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 7/164 (4%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
LL +C++ ++ ++D + +K + L + I +I K GK +++F
Sbjct: 476 LLDGLCNNGKLEKALEVFDYM----QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 531
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK-GGK 282
G N TY I L +++ A+++ +KM E G LP+S +I + G K
Sbjct: 532 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDK 591
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
A A ++ + R + S + L++++ + K LDML
Sbjct: 592 AASAELIREM-RSCRFVGDASTIG-LVANMLHDGRLDKSFLDML 633
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 145/314 (46%), Gaps = 5/314 (1%)
Query: 180 LWDIVKEIGE--KEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYF 237
L D V GE K + ++ ++L++ +K+ K + + + G N TY
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 238 TIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKK 297
+ RR A +V KM++ G PD + +++ +C G + EA + E
Sbjct: 122 LLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMG 181
Query: 298 MYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGA 357
P LI L ++ + A+ ++D + + + +V+ LC+ D+ A
Sbjct: 182 YKPDTVTFNTLIHGLFLHNKASE-AVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 240
Query: 358 KTLLSKMISEGPPPGNAV-FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
+LL KM +G N V +N++I K M A ++ M ++G+KPDV+TY L+S
Sbjct: 241 LSLLKKM-EKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLIS 299
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
N G+ +A +L++ + + VT+++LI + K + A KL +EM + P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 359
Query: 477 NVDEYNKLIQSLCL 490
N+ YN LI C+
Sbjct: 360 NIVTYNSLINGFCM 373
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 129/270 (47%), Gaps = 2/270 (0%)
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A ++ ++M+ G PD G +++ CK G A + + K+ + +I
Sbjct: 205 AVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIID 264
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
LC+ + A D+ + + K + ++S+I LC A LLS MI
Sbjct: 265 GLCKYKH-MDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKIN 323
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P FNS+I A++K G + A ++ M R + P++ TY L++G+ +++EA +I
Sbjct: 324 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 383
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
VTY+TLI+G+CK + + ++L EM G+ N YN LIQ L
Sbjct: 384 FTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL-F 442
Query: 491 KALDWRTAEKLLEDMRLKGLHLNGITRALI 520
+A D A+K+ + M G+ + IT +++
Sbjct: 443 QAGDCDMAQKIFKKMVSDGVPPDIITYSIL 472
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 146/343 (42%), Gaps = 19/343 (5%)
Query: 189 EKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
EK K V I N +I K AF++FNK G + TY I L +
Sbjct: 248 EKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRW 307
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
A + MIE P+ +I F K GK EA ++ ++ + P L
Sbjct: 308 SDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL 367
Query: 309 ISSLCQEDE--------TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTL 360
I+ C D T+ ++ D L D + ++++I+ C+ K V L
Sbjct: 368 INGFCMHDRLDEAQQIFTLMVSKDCLPD---------VVTYNTLIKGFCKAKRVEEGMEL 418
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
+M G +N++I +AGD A ++ K M S G+ PD+ TY+ L+ G
Sbjct: 419 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 478
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
G++E+A + +K+ + TY+ +I G CK + + L + GV+PNV
Sbjct: 479 YGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII 538
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKG-LHLNGITRALIRA 522
Y +I C K L A+ L +M+ G L +G LIRA
Sbjct: 539 YTTMISGFCRKGLK-EEADALFREMKEDGTLPDSGCYNTLIRA 580
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 141/291 (48%), Gaps = 12/291 (4%)
Query: 233 ETYYFTIEALSRRKI----FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHV 288
+T Y E LSR + D A ++ +M+++ P + K++S K K V
Sbjct: 43 KTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKF---DV 99
Query: 289 VYTLARE-KKMYPPQS--VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVI 345
V +L + + + P + + L++ C+ + + LAL +L + I SS++
Sbjct: 100 VISLGEQMQNLGIPHNHYTYSILLNCFCRRSQ-LPLALAVLGKMMKLGYEPDIVTLSSLL 158
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
C K + A L+ +M+ G P FN++I + A+ ++ M +RG +
Sbjct: 159 NGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQ 218
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
PD++TY +++G G ++ A +L + +K + V Y+T+I G CK + D A L
Sbjct: 219 PDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDL 278
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
N+M+ G++P+V YN LI LC W A +LL DM + ++ N +T
Sbjct: 279 FNKMETKGIKPDVFTYNSLISCLCNYG-RWSDASRLLSDMIERKINPNVVT 328
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 1/221 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI F K + + E+F + G V N TY I+ L + D A + +KM+
Sbjct: 400 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 459
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD ++ CK GK ++A VV+ ++ KM P +I +C+ + V+
Sbjct: 460 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGK-VE 518
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
D+ S + K + ++++I CR A L +M +G P + +N++I
Sbjct: 519 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLI 578
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG 421
A + GD + E++K MRS G D T + +++ +G
Sbjct: 579 RARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDG 619
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 118/293 (40%), Gaps = 1/293 (0%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
V N LI F+K GK A ++F++ N TY I D A +
Sbjct: 325 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 384
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
M+ LPD +I FCK + +E ++ ++ + LI L Q
Sbjct: 385 TLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQA 444
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ +A + + I +S ++ LC+ + A + + P
Sbjct: 445 GDC-DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYT 503
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N +I KAG + ++ + +G+KP+V YT ++SG+ G EEA + E K
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 563
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
++ + Y+TLIR + + + +L+ EM+ G + + +I L
Sbjct: 564 EDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 616
>gi|225430658|ref|XP_002268375.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial [Vitis vinifera]
gi|296085168|emb|CBI28663.3| unnamed protein product [Vitis vinifera]
Length = 454
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 172/413 (41%), Gaps = 56/413 (13%)
Query: 116 DGYLESSLDSFELDLHEDFVLKVLETPLVLGENLVCFFKWVTSGV--------VDALLKA 167
D YLE +L+ + + D V +VL + G + FF W S + + LLK
Sbjct: 60 DFYLERTLNKLPISVTSDLVYRVLRSCPNSGTESLRFFNWARSHLSYQPTTLEYEELLKT 119
Query: 168 ICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGD-Y 226
+ + K+ +W I ++ L+ +++ +I F K G A EVFNK
Sbjct: 120 LART---KQFQPMWKIAHQMQ-----TLSPTVVSSIIEEFGKHGLVDQAVEVFNKAKSAL 171
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
C E Y + AL K F A+++ +MI G P+ + +++ +C GK KEA
Sbjct: 172 NCPQTIEVYNSLLFALCEVKYFHGAYALIRRMIRKGVTPNKQTYSVLVNGWCAAGKMKEA 231
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
D L++ S + ++ ++
Sbjct: 232 Q------------------------------------DFLEEMSRKGFNPPVRGRDLLVD 255
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
L + AK ++ KM EG P NS++ A KAG+ +++ + G+ P
Sbjct: 256 GLLNAGYLEAAKEMVRKMTKEGCAPDVETLNSMLEAICKAGEAEFCIDIYNDVCRLGVSP 315
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
+V TY ++ G+++EA IL+ + ++ R P Y +I+ C+ +FD A
Sbjct: 316 NVGTYKIMIPAACKEGRIDEAFRILHRSIEDGHRPFPSLYAPIIKALCRNGQFDDAFCFF 375
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRAL 519
++MK G PN Y LI ++C + + A L +M L+L I+R
Sbjct: 376 SDMKVKGHPPNRPVYTMLI-TMCGRGGRFVDAANYLVEM--TELNLTPISRCF 425
>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 831
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 143/312 (45%), Gaps = 4/312 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI L+SKLGK A ++ N+ D G N++TY I+ + A+SV E M G
Sbjct: 376 LINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAG 435
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR-EKKMYPPQSVVAFLISSLCQEDETVKL 321
PD +++ FCK G+ A + LAR E PP +I + +++
Sbjct: 436 IKPDGITYNILMNAFCKNGQMNRA--LELLARMESGDCPPTLRTYTIIIDGFMKIGDLRM 493
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A + + D + + ++ ++ L + + A +++ +M+ G P + ++I
Sbjct: 494 AFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYTTLIE 553
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
Y+ GDM A + ++ GLKPDV Y L+ G+M+ I E +
Sbjct: 554 GYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAAAGVPM 613
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+ Y+ L+ G+ + + A ++ +M+ G+ P++ Y I + C KA D A +
Sbjct: 614 NNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINA-CCKAGDMLKATET 672
Query: 502 LEDMRLKGLHLN 513
+E M+ +G+ N
Sbjct: 673 IEQMKQQGVQPN 684
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 137/316 (43%), Gaps = 7/316 (2%)
Query: 178 YALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYF 237
+++++ + G K G+ N L+ F K G+ A E+ + C TY
Sbjct: 425 FSVFEDMSNAGIKPDGI----TYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTI 480
Query: 238 TIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKK 297
I+ + A+ M G P + I+ + G+ A +
Sbjct: 481 IIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAG 540
Query: 298 MYPPQSVVAFLISSL-CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHG 356
++P + LI C D + LA + K + ++S++++ C+ +
Sbjct: 541 VHPNERSYTTLIEGYACIGD--MGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQS 598
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
+ ++M + G P N ++N ++ +++ GDM A ++++ MR GL PD+++YT ++
Sbjct: 599 TLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFIN 658
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
G M +A E + + K+ + + Y TLI G+ + AL +EMK G+ P
Sbjct: 659 ACCKAGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWASASYPEKALICYDEMKSAGMIP 718
Query: 477 NVDEYNKLIQSLCLKA 492
+ Y+ ++ SL +A
Sbjct: 719 DKPLYHCIMTSLLSRA 734
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 120/251 (47%), Gaps = 5/251 (1%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
+++++ K G A + R + P LI + + ++ A+ +++ E
Sbjct: 198 LVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQD-LRGAIACVEEMEAE 256
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
+S +I R+ DV A+ + +SE + ++N++I AY KAG+M A
Sbjct: 257 GVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERA 316
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK-KNHSRLSP--VTYHTL 449
++ M +GL+ + Y LM GY + +++ + K + + LSP V+Y L
Sbjct: 317 EAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGCL 376
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
I Y KL + D AL++ NEM+D G++ N Y+ +I ++ D A + EDM G
Sbjct: 377 INLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGY-VQLGDTANAFSVFEDMSNAG 435
Query: 510 LHLNGITRALI 520
+ +GIT ++
Sbjct: 436 IKPDGITYNIL 446
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 117/289 (40%), Gaps = 3/289 (1%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G N TY I R + A ++ + + II +CK G + A
Sbjct: 257 GVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERA 316
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSL--CQEDETVKLALDMLDDFSGEARKYAIKPFSSV 344
+ T E+ + + L+ C+ + L + + + +
Sbjct: 317 EAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGCL 376
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
I ++ + A + ++M +G ++ +I Y + GD A + + M + G+
Sbjct: 377 INLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGI 436
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
KPD TY LM+ + GQM A E+L + + TY +I G+ K+ + A +
Sbjct: 437 KPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIGDLRMAFE 496
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
+ +MK G +P+ YN ++ L +A A ++++M + G+H N
Sbjct: 497 TVRDMKMAGFRPSAATYNVIMHGLA-QAGQMDRAASIIDEMVVAGVHPN 544
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 144/321 (44%), Gaps = 7/321 (2%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
TV I N L+ K + ++ G + N TY ++AL + D A +
Sbjct: 143 TVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLF 202
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+M G PD+ ++S CK GK +A LA K P V LI +C+E
Sbjct: 203 VEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAR---ELAGRFK--PSVPVYNALIDGMCKE 257
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+++A+ +L + + +S +I SLC +V A L ++M G
Sbjct: 258 GR-IEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHT 316
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
F +I G + A+++ KLM G +P+V Y L+ G + G +EEA ++ ++ +
Sbjct: 317 FTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQ 376
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
++ + TY LI G+ K + A + N M G +PNV Y ++ LC ++ +
Sbjct: 377 RSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSM-F 435
Query: 496 RTAEKLLEDMRLKGLHLNGIT 516
A L+E M L+G N IT
Sbjct: 436 DQANSLVEKMTLEGCTPNTIT 456
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 147/351 (41%), Gaps = 46/351 (13%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ +CS+ +E + D ++ G + V + LI F+K G A E +N
Sbjct: 353 NTLIHGLCSNGSLEEALQVCDQMQRSG----CLPNVTTYSILIDGFAKSGDLVGASETWN 408
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ +GC N TY ++ L + +FD A S+ EKM G P++ I C G
Sbjct: 409 RMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNG 468
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ V+ A+ +L+ G I +
Sbjct: 469 R------------------------------------VEWAMKLLERMQGHGCLPNITTY 492
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+ ++ +L RM A L ++ + P +N+V+ +S+AG M A+++
Sbjct: 493 NELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALV 552
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEA---KKNHSRLSPVTYHTLIRGYCKLEE 458
RG PD TY ++ Y G+++ A +++ K+ H + +TY +LI G C
Sbjct: 553 RGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDI--ITYTSLIWGACNWMN 610
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
+ A+ L++ + G+ PN +N L++ +L +L+D+ KG
Sbjct: 611 IEEAMAFLDKAINQGICPNFATWNALVRCF-FDSLGHMGPIHILDDILRKG 660
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 149/346 (43%), Gaps = 10/346 (2%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEK-EKGV-LTVEILNELIALFSKLGKGKAAF 217
V +AL+ +C G+ EV +K +GE + GV V + +I G + AF
Sbjct: 246 VYNALIDGMCKE-GRIEV-----AIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAF 299
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
+F + GC AN T+ I+ R A + + MI+ G P+ +I
Sbjct: 300 ALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGL 359
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
C G +EA V + P + + LI + + V A + + +
Sbjct: 360 CSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVG-ASETWNRMISHGCRPN 418
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+ ++ ++ LC+ A +L+ KM EG P FN+ I G + AM++L+
Sbjct: 419 VVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLE 478
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M+ G P++ TY L+ + EEA + E + + + + VTY+T++ G+ +
Sbjct: 479 RMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAG 538
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
AL+L + G P+ YN +I + C K + A +L+E
Sbjct: 539 MMGEALQLFGKALVRGTAPDSITYNTMIHAYC-KQGKVKIAAQLVE 583
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 121/293 (41%), Gaps = 6/293 (2%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
GK A +++ GC N Y I L + A VC++M +G LP+
Sbjct: 328 GKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTY 387
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
+I F K G A + P ++ LC+ + A +++ +
Sbjct: 388 SILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCK-NSMFDQANSLVEKMT 446
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
E F++ I+ LC V A LL +M G P +N ++ A +
Sbjct: 447 LEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYE 506
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A + + + +R L+P++ TY ++ G++ G M EA ++ +A + +TY+T+I
Sbjct: 507 EAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMI 566
Query: 451 RGYCKLEEFDCALKLLNEMKDVG-VQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
YCK + A +L+ + + P++ Y LI C +W E+ +
Sbjct: 567 HAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGAC----NWMNIEEAM 615
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 71/160 (44%)
Query: 330 SGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
+ A ++ + +I L R ++ + +L +M +G +F +I+ Y + G
Sbjct: 66 NSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSA 125
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
A++M + G KP V Y L+ + + + + KK+ + TY+ L
Sbjct: 126 EQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNIL 185
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
++ CK + D A KL EM + G P+ Y ++ SLC
Sbjct: 186 LKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLC 225
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 81/203 (39%), Gaps = 31/203 (15%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F +I R+ A + ++ G P ++N ++ A + M+
Sbjct: 112 FICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMK 171
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEI----------------------------LN 432
GL P+V+TY L+ +++ A ++ ++
Sbjct: 172 KDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKID 231
Query: 433 EAKKNHSRLSPV--TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
+A++ R P Y+ LI G CK + A+KLL EM D GV PNV Y+ +I SLC+
Sbjct: 232 DARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCV 291
Query: 491 KALDWRTAEKLLEDMRLKGLHLN 513
+ A L M L+G N
Sbjct: 292 SG-NVELAFALFAQMFLRGCDAN 313
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 149/330 (45%), Gaps = 5/330 (1%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
LL+A C G K+ L D + + G V +LN + + G+ + A E
Sbjct: 207 LLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGI----CQEGRVEDAMEFLKNL 262
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
YGC N +Y ++ L + ++ A + E+M G P+ +IS+ C+ G
Sbjct: 263 PSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLV 322
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
+ A V + P L+ + C++ + K A++ ++ I +++
Sbjct: 323 EPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHK-AMEFVELMVSRGCYPDIVSYNT 381
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
++ +LCR +V A LL ++ +G P +N+VI +KAG A+E+L M S+G
Sbjct: 382 LLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKG 441
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
L+PD+ TY+ + SG ++EEA + + R + Y+ ++ G CK E A+
Sbjct: 442 LQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAI 501
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
L M G PN Y L++ L + L
Sbjct: 502 DLFAYMISSGCMPNESTYTILVEGLAYEGL 531
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 153/336 (45%), Gaps = 6/336 (1%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V + N ++A + G+ AA + D + TY I L R A +V E
Sbjct: 134 VMVYNAMVAGYCGAGQLDAARRLV---ADMPVEPDAYTYNTLIRGLCGRGRTSNALAVLE 190
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
M G LPD ++ CK K+A + +K P +++ +CQE
Sbjct: 191 DMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEG 250
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
V+ A++ L + + ++ V++ L + A+ L+ +M +G PP F
Sbjct: 251 R-VEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTF 309
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N +IS + G + PAME+L+ M G P+ +Y L+ + ++ +A E +
Sbjct: 310 NMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVS 369
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
V+Y+TL+ C+ E D A++LL+++KD G P + YN +I L KA +
Sbjct: 370 RGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGL-TKAGKTK 428
Query: 497 TAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIE 532
A +LL++M KGL + IT + I A ED IE
Sbjct: 429 EALELLDEMTSKGLQPDIITYSTI-ASGLCREDRIE 463
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 107/237 (45%), Gaps = 1/237 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V N LI+ + G + A EV + YGC N +Y + A ++K A E
Sbjct: 306 VVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVE 365
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
M+ G PD +++ C+ G+ A + ++K P +I L +
Sbjct: 366 LMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAG 425
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+T K AL++LD+ + + + I +S++ LCR + A K+ G P A++
Sbjct: 426 KT-KEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALY 484
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
N+++ K + A+++ M S G P+ TYT L+ G A G ++EA E+ +
Sbjct: 485 NAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQ 541
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 119/281 (42%), Gaps = 14/281 (4%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGK---IISWFCKGGKAKEAHVVYTLARE 295
+ L RR D A + + + P VG +I C G+ +A V +
Sbjct: 74 LRVLVRRGELDDALRLVDSLAGLNP-PSPAAVGPCAALIKKLCASGRTADARRVLAASGP 132
Query: 296 KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVH 355
M V +++ C + + A ++ D E Y ++++IR LC
Sbjct: 133 DVM-----VYNAMVAGYCGAGQ-LDAARRLVADMPVEPDAYT---YNTLIRGLCGRGRTS 183
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
A +L M G P + ++ A K AM++L M +G PD+ TY ++
Sbjct: 184 NALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVL 243
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
+G G++E+A E L + V+Y+ +++G E ++ A KL+ EM G
Sbjct: 244 NGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCP 303
Query: 476 PNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
PNV +N LI LC + L A ++LE M G N ++
Sbjct: 304 PNVVTFNMLISFLCRRGL-VEPAMEVLEQMPQYGCTPNSLS 343
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 178/420 (42%), Gaps = 55/420 (13%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+LL+ + S GK +++ V E + L +L + ++ G A + F
Sbjct: 124 SLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVL---MNAYTDSGYFSDAIQCFRL 180
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEK------------- 269
+ + + + L + + AW+ E++++ G PD K
Sbjct: 181 VRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHK 240
Query: 270 ----------VGK------------IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF 307
+GK +I+ +CK G + + E +++P +
Sbjct: 241 INEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSV 300
Query: 308 LISSLCQE---DETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTL 360
LI+ LC+E D+ KL L+M D + P F+++I C +
Sbjct: 301 LINGLCKEGQLDDANKLFLEMCDR--------GLVPNDVTFTTLINGHCVTGRADLGMEI 352
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
+M+ +G P +N++I+ K GD+ A +++ M RGLKPD +TYT L+ G
Sbjct: 353 YQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCK 412
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
G +E A EI E K L V + LI G+C+ + A + L EM + G++P+
Sbjct: 413 EGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDAT 472
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIENGEALVEA 540
Y +I C K D +T KLL++M+ G H+ G+ + ++ ++N L++A
Sbjct: 473 YTMVIHGFCKKG-DVKTGFKLLKEMQCDG-HVPGVVTYNVLLNGLCKQGQMKNANMLLDA 530
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 140/321 (43%), Gaps = 2/321 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N L+ K K A +F + G G ++ I + D + + M+
Sbjct: 228 FNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMM 287
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
E PD +I+ CK G+ +A+ ++ ++ + P LI+ C
Sbjct: 288 ENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGR-A 346
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
L +++ + K + ++++I LC++ D+ AK L+ +M G P + +
Sbjct: 347 DLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTML 406
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I K GD+ A+E+ K M G++ D +T L+SG+ GQ+ EA L E +
Sbjct: 407 IDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGI 466
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
+ TY +I G+CK + KLL EM+ G P V YN L+ LC K + A
Sbjct: 467 KPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLC-KQGQMKNAN 525
Query: 500 KLLEDMRLKGLHLNGITRALI 520
LL+ M G+ + IT ++
Sbjct: 526 MLLDAMLNLGVVPDDITYNIL 546
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 143/332 (43%), Gaps = 19/332 (5%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ +C E L+ + + G + TV N LI + K G F +
Sbjct: 229 NVLMHRLCKEHKINEAQLLFGEIGKRGLRP----TVVSFNTLINGYCKSGNLDQGFRLKR 284
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ + TY I L + D A + +M + G +P+ +I+ C G
Sbjct: 285 FMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTG 344
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED---ETVKLALDMLDDFSGEARKYAI 338
+A +Y K + P LI+ LC+ E KL ++M + +
Sbjct: 345 RADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEM--------TQRGL 396
Query: 339 KP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
KP ++ +I C+ D+ A + +M+ EG N F ++IS + + G + A
Sbjct: 397 KPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAER 456
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
L+ M G+KPD TYT ++ G+ G ++ ++L E + + VTY+ L+ G C
Sbjct: 457 TLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLC 516
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
K + A LL+ M ++GV P+ YN L++
Sbjct: 517 KQGQMKNANMLLDAMLNLGVVPDDITYNILLE 548
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 75/177 (42%), Gaps = 21/177 (11%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS-EGPPPGNAVFNSVISAYSKAGDMTPAM 393
+ +I + ++ LC K + A++LL ++S +G ++VF SV+ A
Sbjct: 100 RLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEA----------- 148
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
RG ++ LM+ Y + G +A + +K++ ++ + L
Sbjct: 149 --------RGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRL 200
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
KL A E+ D G P+V ++N L+ LC K A+ L ++ +GL
Sbjct: 201 MKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLC-KEHKINEAQLLFGEIGKRGL 256
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 160/383 (41%), Gaps = 20/383 (5%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGV-LTVEILNELIALFSKLGKGKAAFE 218
V+D L+ C V Y + +GV TV ++ + + +A
Sbjct: 176 VLDILVDGDCPRVAPNVFYDML---------SRGVSPTVYTFGVVMKALCMVSEVDSACS 226
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+ +GCV N Y I AL A + E M PD + +I C
Sbjct: 227 LLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLC 286
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
+ G+ EA + + +L+ LC+ + V A +L+
Sbjct: 287 RAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQ-VDEARALLNKIPNPNTVL-- 343
Query: 339 KPFSSVIRSLCRMKDVHGAKTLL-SKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
++++I AK LL + M+ G P FN +I K G + A+E+L
Sbjct: 344 --YNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLN 401
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M ++ +P+V TYT L++G+ G++EEA EI+N L+ V Y+ LI CK
Sbjct: 402 EMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDG 461
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT- 516
+ AL+L EM G +P++ +N LI LC K A L DM L+G+ N +T
Sbjct: 462 NIEEALQLFGEMSGKGCKPDIYTFNSLINGLC-KNHKMEEALSLYHDMFLEGVIANTVTY 520
Query: 517 RALIRAVKELEEDAIENGEALVE 539
L+ A L D+I+ LV+
Sbjct: 521 NTLVHAF--LMRDSIQQAFKLVD 541
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 136/305 (44%), Gaps = 5/305 (1%)
Query: 191 EKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDW 250
E V+T IL I F K G+ + A E+ N G N Y I AL + +
Sbjct: 409 EPNVITYTIL---INGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEE 465
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A + +M G PD +I+ CK K +EA +Y + + L+
Sbjct: 466 ALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVH 525
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
+ D +++ A ++D+ ++ +I++LC+ V L +M+ +G
Sbjct: 526 AFLMRD-SIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIF 584
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P N +IS + G + A++ L+ M RGL PD+ TY L++G G ++EA +
Sbjct: 585 PTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNL 644
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
N+ + R +TY+TLI +C F+ A LL + D G PN ++ LI + +
Sbjct: 645 FNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYI-V 703
Query: 491 KALDW 495
K + W
Sbjct: 704 KKIPW 708
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 145/315 (46%), Gaps = 7/315 (2%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V+ N++I + G+ A ++ ++ G + TY + + L R D A ++
Sbjct: 275 VQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLN 334
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAH-VVYTLAREKKMYPPQSVVAFLISSLCQE 315
K+ P++ +IS + G+ +EA ++Y P +I L ++
Sbjct: 335 KIPN----PNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKK 390
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
V AL++L++ + + + ++ +I C+ + A +++ M ++G
Sbjct: 391 GYLVS-ALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVG 449
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N +I A K G++ A+++ M +G KPD+YT+ L++G +MEEA + ++
Sbjct: 450 YNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMF 509
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+ VTY+TL+ + + A KL++EM G + YN LI++LC K
Sbjct: 510 LEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALC-KTGAV 568
Query: 496 RTAEKLLEDMRLKGL 510
L E+M KG+
Sbjct: 569 EKGLGLFEEMLGKGI 583
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 177/424 (41%), Gaps = 47/424 (11%)
Query: 147 ENLVCFFK-WVTSGVVDA-----LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEIL 200
++ VC F+ SG+ D L+ C + +E L+D +K+ G K ++
Sbjct: 384 KDAVCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKP----SINTY 439
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+ + K G A +++++ G N TY + +K FD A+++ ++M +
Sbjct: 440 NSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQ 499
Query: 261 TGS-----------------------------------LPDSEKVGKIISWFCKGGKAKE 285
G +P II+ F K G
Sbjct: 500 NGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGS 559
Query: 286 AHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVI 345
A VY REK + P I C+ + +AL ML+D + I ++++I
Sbjct: 560 AFTVYQQMREKGLPPNIITYTSFIDGYCRTGCS-DMALKMLNDVRRRGLQPDIVAYNALI 618
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
C+ ++ A LL ++ +G P V+NS+I+ Y M + + M G+
Sbjct: 619 NGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIV 678
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
D TYT L+ G++ G + A E+ +E T+ L G C+ + D A KL
Sbjct: 679 ADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKL 738
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRAVKE 525
L EM+ + V+PNV YN LI L+ + A +L ++M G+ + T ++ + K
Sbjct: 739 LEEMRRLDVRPNVFIYNMLINGY-LRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVSKKF 797
Query: 526 LEED 529
LE D
Sbjct: 798 LEAD 801
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 169/376 (44%), Gaps = 22/376 (5%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
V L++ C ++EV ++ KE K+ V T + LI ++G + A+E+
Sbjct: 299 VATTLMRGYCL---RQEVGNALNLFKET-LKDGIVPTKVMYGVLIRGCDQVGMTQKAYEL 354
Query: 220 FNKFGDYGCVANQETYYFTIEAL--SRRKIFDWAWSVC--EKMIETGSLPDSEKVGKIIS 275
+ G + + ++ L RR W +VC E+M ++G LPD +I
Sbjct: 355 CRQMTGQGLLPSTFELSLVLKGLLNDRR----WKDAVCLFEEMADSG-LPDVFTYNNLIH 409
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGE 332
W C+ K +EA ++ ++ + P + L+ C++ DE VKL +M E
Sbjct: 410 WHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEM----PME 465
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
K + + +++R KD A LL +M G + +N +I+ +
Sbjct: 466 GFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEV 525
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
MLK S G P + TY +++G+ G M A + + ++ + +TY + I G
Sbjct: 526 DGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDG 585
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
YC+ D ALK+LN+++ G+QP++ YN LI C + + A +LL + GL
Sbjct: 586 YCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEG-NMSHALQLLVILLKDGLAP 644
Query: 513 NGIT-RALIRAVKELE 527
N + +LI K L
Sbjct: 645 NTVVYNSLITGYKNLN 660
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 128/287 (44%), Gaps = 2/287 (0%)
Query: 204 IALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGS 263
I KLG G A + + + G TY ++ L + + A V ++M + G
Sbjct: 234 ITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGK 293
Query: 264 LPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLAL 323
D ++ +C + A ++ + + P + + LI C + + A
Sbjct: 294 KMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRG-CDQVGMTQKAY 352
Query: 324 DMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAY 383
++ +G+ + S V++ L + A L +M G P +N++I +
Sbjct: 353 ELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGLP-DVFTYNNLIHWH 411
Query: 384 SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
+A + A+ + M+ G+KP + TY L+ GY G M+EA ++ +E + +
Sbjct: 412 CQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNV 471
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
VTY TL+RGY ++FD A LL+EMK GV N YN LI +C+
Sbjct: 472 VTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICM 518
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 113/253 (44%), Gaps = 2/253 (0%)
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M+ G +PD + ++ +G AK+A ++ R + Y + + + S C ++
Sbjct: 148 MVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRG-YRVDAWMFDALMSACLKEG 206
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
+ A+ + D+ G + ++ I +LC++ D A +L +M G + +
Sbjct: 207 MHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYR 266
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+++ K G M A+ + MR G K DV T LM GY ++ A + E K+
Sbjct: 267 TMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKD 326
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
+ V Y LIRG ++ A +L +M G+ P+ E + +++ L L W+
Sbjct: 327 GIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGL-LNDRRWKD 385
Query: 498 AEKLLEDMRLKGL 510
A L E+M GL
Sbjct: 386 AVCLFEEMADSGL 398
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 65/154 (42%), Gaps = 1/154 (0%)
Query: 362 SKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG 421
+ M++ G P ++ ++ A+ + MR RG + D + + LMS
Sbjct: 146 AHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKE 205
Query: 422 GQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEY 481
G E+A + +E Y I CKL + AL++L EMK+VG Y
Sbjct: 206 GMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTY 265
Query: 482 NKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
++ L +K A ++ ++MR G ++ I
Sbjct: 266 RTMVDVL-VKTGRMEEALRVNDEMRDAGKKMDVI 298
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 151/310 (48%), Gaps = 3/310 (0%)
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
+A F+ G N TY + AL R A S+ M G P+ ++
Sbjct: 173 SARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLV 232
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR 334
+ F + G+ A + + RE + P +++ +C+ + ++ A + D+ E
Sbjct: 233 AAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGK-MEDARKVFDEMVREGL 291
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
+++++ C+ H A ++ ++M +G P F S+I KAG++ A+
Sbjct: 292 APDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVT 351
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+++ MR RGL+ + T+T L+ G+ G +++A + K+ + S V Y+ LI GYC
Sbjct: 352 LVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYC 411
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG 514
+ D A +LL+EM+ G++P+V Y+ +I + C K D +A +L + M KG+ +
Sbjct: 412 MVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYC-KNCDTHSAFELNQQMLEKGVLPDA 470
Query: 515 IT-RALIRAV 523
IT +LIR +
Sbjct: 471 ITYSSLIRVL 480
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 133/294 (45%), Gaps = 1/294 (0%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
V N L+ G K A + GC N TY + A R D A +
Sbjct: 189 NVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLV 248
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
M E G P+ +++ CK GK ++A V+ + + P L+ C+
Sbjct: 249 GMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKA 308
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ + AL + + + + + F+S+I +C+ ++ A TL+ +M G
Sbjct: 309 GCSHE-ALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVT 367
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
F ++I + K G + A+ ++ M+ +KP V Y L++GY G+M+EA E+L+E +
Sbjct: 368 FTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEME 427
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ VTY T+I YCK + A +L +M + GV P+ Y+ LI+ LC
Sbjct: 428 AKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLC 481
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 113/218 (51%), Gaps = 2/218 (0%)
Query: 299 YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
Y P SV+A+ L D ++ A D + + ++ ++R+LC A
Sbjct: 152 YVP-SVLAYNAVLLALSDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEAL 210
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
++L M G P +N++++A+ +AG++ A ++ +MR GLKP++ T+ +++G
Sbjct: 211 SILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGM 270
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G+ME+A ++ +E + V+Y+TL+ GYCK AL + EM G+ P+V
Sbjct: 271 CKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDV 330
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ LI +C KA + A L+ MR +GL +N +T
Sbjct: 331 VTFTSLIHVMC-KAGNLERAVTLVRQMRERGLQMNEVT 367
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 153/361 (42%), Gaps = 38/361 (10%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L++A+C +KE ++ ++ G V N L+A F + G+ A +
Sbjct: 194 NILVRALCGRGHRKEALSILRDMRGAGCGP----NVVTYNTLVAAFFRAGEVDGAERLVG 249
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ G N T+ + + + + A V ++M+ G PD ++ +CK G
Sbjct: 250 MMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAG 309
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDM------------- 325
+ EA V+ +K + P LI +C+ + V L M
Sbjct: 310 CSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFT 369
Query: 326 --LDDFSGEA------------RKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISE 367
+D F + ++ IKP ++++I C + + A+ LL +M ++
Sbjct: 370 ALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAK 429
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P ++++ISAY K D A E+ + M +G+ PD TY+ L+ ++ +A
Sbjct: 430 GLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDA 489
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
+ K + TY +LI G+CK + AL L ++M GV P+V Y+ LI
Sbjct: 490 HVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLING 549
Query: 488 L 488
L
Sbjct: 550 L 550
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 162/371 (43%), Gaps = 26/371 (7%)
Query: 145 LGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELI 204
L NLV F ++++ +C + ++ ++D + G GV N L+
Sbjct: 256 LKPNLVTF---------NSMVNGMCKAGKMEDARKVFDEMVREGLAPDGV----SYNTLV 302
Query: 205 ALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL 264
+ K G A VF + G + + T+ I + + + A ++ +M E G
Sbjct: 303 GGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQ 362
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLC---QEDETV 319
+ +I FCK G +A + ++ ++ P SVV + LI+ C + DE
Sbjct: 363 MNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKP--SVVCYNALINGYCMVGRMDE-- 418
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
A ++L + + K + +S++I + C+ D H A L +M+ +G P ++S+
Sbjct: 419 --ARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSL 476
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I ++ A + K M GL+PD +TYT L+ G+ G +E A + ++ K
Sbjct: 477 IRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGV 536
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
VTY LI G K A +LL ++ P +Y+ L+ C + + ++
Sbjct: 537 LPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMH--CCRKAELKSVL 594
Query: 500 KLLEDMRLKGL 510
LL+ +KGL
Sbjct: 595 ALLKGFCMKGL 605
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 116/293 (39%), Gaps = 21/293 (7%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
+V N LI + +G+ A E+ ++ G + TY I A + A+ +
Sbjct: 399 SVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELN 458
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
++M+E G LPD+ +I C + +AHV++ + + P + LI C+E
Sbjct: 459 QQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKE 518
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
V+ AL + D + +S +I L + A+ LL K+ E P P N
Sbjct: 519 GN-VESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTK 577
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+++++ KA ++ + L+ G+ G M EA ++
Sbjct: 578 YDALMHCCRKA--------------------ELKSVLALLKGFCMKGLMNEADKVYQSML 617
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ L Y LI G+C+ AL +M G PN LI+ L
Sbjct: 618 DRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGL 670
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 161/360 (44%), Gaps = 38/360 (10%)
Query: 168 ICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYG 227
+C + ++ + L+ +K +G V T IL I F K G + A +F + G
Sbjct: 298 LCHATKVEKAFLLFQEMKMVGVTPD-VYTYTIL---IDSFCKAGLIEQAQWLFEEMRSVG 353
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH 287
C TY I A + K A + +M++ G P+ G ++ CK G +A
Sbjct: 354 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 413
Query: 288 VVY------TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
VY + + + Y P C++ T LA +++ +
Sbjct: 414 EVYAKLIGTSDSADSDFYFP-----------CEDRHT--LAPNVVT-------------Y 447
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+++ LC+ V A LL M+S G P + V++++I + KAG + A E+ M
Sbjct: 448 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 507
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G P V+TYT L+ G+++ A ++L++ K+ + VTY +I G C++ E +
Sbjct: 508 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 567
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALI 520
ALKLL+ M++ G PNV Y LI L KA + L M KG N +T R LI
Sbjct: 568 ALKLLSLMEEKGCSPNVVTYTALIDGL-GKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLI 626
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 126/317 (39%), Gaps = 11/317 (3%)
Query: 181 WDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIE 240
W ++ E+E L + +I+ + A ++ C+ N TY +
Sbjct: 91 WADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLS 150
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP 300
++K W + M+ G P+ ++ +C A+ + P
Sbjct: 151 GFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPP 210
Query: 301 PQSVVAFLISSLC-QEDETVKLALDMLDDFSGEA-------RKYAIKPFSSVIRSLCRMK 352
V I S+C QE LD+ + GE K + F+ R LC +
Sbjct: 211 GYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFA---RCLCGVG 267
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT 412
A L+ +M+ +G P + ++ VI+ A + A + + M+ G+ PDVYTYT
Sbjct: 268 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYT 327
Query: 413 GLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
L+ + G +E+A + E + + VTY LI Y K ++ A + + M D
Sbjct: 328 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 387
Query: 473 GVQPNVDEYNKLIQSLC 489
G +PN Y L+ LC
Sbjct: 388 GCRPNDVTYGALVDGLC 404
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 133/315 (42%), Gaps = 37/315 (11%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
N TY ++ L + D A + + M+ +G P+ +I FCK GK A V+
Sbjct: 443 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 502
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
+ P LI + +D + LA+ +L ++ + ++++I LCR
Sbjct: 503 LQMTKCGYLPSVHTYTSLIDRM-FKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 561
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ + A LLS M +G P + ++I KAG + ++++ M +G P+ T
Sbjct: 562 IGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVT 621
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK--------LEE---- 458
Y L++ G +++A +L E K+ + Y I+G+ K LEE
Sbjct: 622 YRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESY 681
Query: 459 ------------FDC---------ALKLLNEMKDV--GVQPNVDEYNKLIQSLCLKALDW 495
DC A++L EM +V V+ + D Y LIQ+LCL A
Sbjct: 682 GTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCL-ASQV 740
Query: 496 RTAEKLLEDMRLKGL 510
A +L +M +G
Sbjct: 741 EEAFRLYSEMTRRGF 755
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 129/293 (44%), Gaps = 13/293 (4%)
Query: 225 DYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAK 284
D+G ++ TY ++ LS D + V ++M E+G D VG CK G+
Sbjct: 33 DFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWA 92
Query: 285 EAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSV 344
+A + E++ + +V+ + S E A+ L + + + ++
Sbjct: 93 DALDMI----EREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTL 148
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
+ + K + K +++ M++EG P ++FNS++ +Y D A ++L M + G
Sbjct: 149 LSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGC 208
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR-------LSPVTYHTLIRGYCKLE 457
P Y + G G + + ++L+ A+K + L+ V R C +
Sbjct: 209 PPGYVVYN-IFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVG 267
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+FD A +L+ EM G P+ Y+K+I LC A A L ++M++ G+
Sbjct: 268 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLC-HATKVEKAFLLFQEMKMVGV 319
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 139/348 (39%), Gaps = 40/348 (11%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+ +C + + L D + G + + + + LI F K GK +A EVF +
Sbjct: 449 ALVDGLCKAHKVDHAHELLDAMLSSGCEPNHI----VYDALIDGFCKAGKIDSAQEVFLQ 504
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + + TY I+ + + D A V +M++ P+ +I C+ G+
Sbjct: 505 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGE 564
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+++A + +L EK P LI L + + + L+LD+ S + +
Sbjct: 565 SEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGK-IDLSLDLFTQMSRKGCSPNYVTYR 623
Query: 343 SVIRSLC-------------RMKDVHGAKTL--------------------LSKMISEGP 369
+I LC MK + K L L +M S G
Sbjct: 624 VLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGT 683
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMR--SRGLKPDVYTYTGLMSGYANGGQMEEA 427
P V+ +I +SKAG + AME+ K M +K D Y L+ Q+EEA
Sbjct: 684 VPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEA 743
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
+ +E + + LI+G +++++D AL+L + GV
Sbjct: 744 FRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGVN 791
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 139/321 (43%), Gaps = 3/321 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I K G AF +FN+ G A+ Y I +D + MI+
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD +I F K GK +EA ++ ++ + P LI C+E++ K A
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDK-A 371
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
MLD + I+ F+ +I C+ + L KM G +N++I
Sbjct: 372 NHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQG 431
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ + G + A E+ + M SR ++PD+ +Y L+ G + G+ E+A EI + +K+ L
Sbjct: 432 FCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELD 491
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
Y+ +I G C + D A L + GV+P+V YN +I LC K A+ L
Sbjct: 492 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKG-SLSEADLLF 550
Query: 503 EDMRLKGLHLNGIT-RALIRA 522
M G NG T LIRA
Sbjct: 551 RKMEEDGHSPNGCTYNILIRA 571
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 142/334 (42%), Gaps = 19/334 (5%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
L+ +C E L D + E+G K T+ LN L+ GK A + ++
Sbjct: 147 TLINGLCLEGRVSEALELVDRMVEMGHKP----TLITLNALVNGLCLNGKVSDAVLLIDR 202
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ G N+ TY ++ + + A + KM E D+ K II CK G
Sbjct: 203 MVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGS 262
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLC---QEDETVKLALDMLDDFSGEARKYAIK 339
A ++ K + LI C + D+ KL DM+ K I
Sbjct: 263 LDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI--------KRKIT 314
Query: 340 P----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
P FS++I + + A+ L +MI G P + S+I + K + A M
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM 374
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
L LM S+G P++ T+ L++GY +++ E+ + VTY+TLI+G+C+
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 434
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
L + + A +L EM V+P++ Y L+ LC
Sbjct: 435 LGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC 468
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 136/312 (43%), Gaps = 3/312 (0%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
AF K G + T+ I L A + ++M+E G P + +++
Sbjct: 126 AFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVN 185
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
C GK +A ++ E P + ++ +C+ +T LA+++L K
Sbjct: 186 GLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA-LAMELLRKMEERKIK 244
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+S +I LC+ + A L ++M +G ++ ++I + AG ++
Sbjct: 245 LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKL 304
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
L+ M R + PDV ++ L+ + G++ EA E+ E + VTY +LI G+CK
Sbjct: 305 LRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCK 364
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
+ D A +L+ M G PN+ +N LI C KA +L M L+G+ + +
Sbjct: 365 ENQLDKANHMLDLMVSKGCGPNIRTFNILINGYC-KANLIDDGLELFRKMSLRGVVADTV 423
Query: 516 T-RALIRAVKEL 526
T LI+ EL
Sbjct: 424 TYNTLIQGFCEL 435
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 98/203 (48%), Gaps = 2/203 (0%)
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
L LD+ + + + S +I CR + + A + + K+I G P F+++I
Sbjct: 90 LVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLI 149
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ G ++ A+E++ M G KP + T L++G G++ +A +++ + +
Sbjct: 150 NGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQ 209
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+ VTY +++ CK + A++LL +M++ ++ + +Y+ +I LC K A
Sbjct: 210 PNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC-KDGSLDNAFN 268
Query: 501 LLEDMRLKGLHLNGIT-RALIRA 522
L +M +KG + I LIR
Sbjct: 269 LFNEMEIKGFKADIIIYTTLIRG 291
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 93/226 (41%), Gaps = 1/226 (0%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
+ N LI + K E+F K G VA+ TY I+ + A +
Sbjct: 386 NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELF 445
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
++M+ PD ++ C G+ ++A ++ + KM + +I +C
Sbjct: 446 QEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 505
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ V A D+ + K +K ++ +I LC+ + A L KM +G P
Sbjct: 506 SK-VDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCT 564
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG 421
+N +I A+ GD T + ++++ ++ G D T ++ ++G
Sbjct: 565 YNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDG 610
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 111/271 (40%), Gaps = 1/271 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F K GK + A E+ + G + TY I+ + D A + + M+ G
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P+ +I+ +CK + ++ + + LI C+ + +++A
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK-LEVA 441
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++ + + I + ++ LC + A + K+ ++N +I
Sbjct: 442 KELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHG 501
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
A + A ++ + +G+KPDV TY ++ G G + EA + + +++ +
Sbjct: 502 MCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPN 561
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
TY+ LIR + + + KL+ E+K G
Sbjct: 562 GCTYNILIRAHLGEGDATKSAKLIEEIKRCG 592
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 92/199 (46%), Gaps = 1/199 (0%)
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A+D+ + + + + FS + + R K L +M +G + +I+
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
+ ++ A + + G +PD T++ L++G G++ EA E+++ + +
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+ +T + L+ G C + A+ L++ M + G QPN Y +++ +C K+ A +L
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMC-KSGQTALAMEL 234
Query: 502 LEDMRLKGLHLNGITRALI 520
L M + + L+ + ++I
Sbjct: 235 LRKMEERKIKLDAVKYSII 253
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 149/318 (46%), Gaps = 2/318 (0%)
Query: 168 ICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYG 227
+ S V + + + + KE+ + GV V + +I K+GK + A +V +G
Sbjct: 201 LVSLVKEGRIGVVESVYKEMIRRRIGV-NVVTFDVVINGLCKVGKFQKAGDVVEDMKAWG 259
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH 287
+ TY I+ + A ++ ++M+ P+ +I FC+ A
Sbjct: 260 FSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAK 319
Query: 288 VVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRS 347
V+ + + + P LI+ LC + + AL + D SG K + ++++I
Sbjct: 320 KVFEEMQRQGLQPNVVTYNSLINGLCSNGK-LDEALGLQDKMSGMGLKPNVVTYNALING 378
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
C+ K + A+ +L + G P FN++I AY KAG M A + +M G+ P+
Sbjct: 379 FCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPN 438
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
V TY L+ G+ G ++EA ++ E + N + VTY+ L+ CK E A++LL+
Sbjct: 439 VSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLD 498
Query: 468 EMKDVGVQPNVDEYNKLI 485
EM +VG+ P+ YN LI
Sbjct: 499 EMFEVGLNPSHLTYNALI 516
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 123/515 (23%), Positives = 207/515 (40%), Gaps = 60/515 (11%)
Query: 31 LNISRSLSKPSLYRSSRFLSESPAANPKDESSFSPETDFSSRSFGENEYAQMDPSADAVE 90
+N R P S+RF P+ +PK ++ +P + +S N + P+ +
Sbjct: 1 MNCLRLTQFPKRCLSTRF----PSLDPKLNNTKTPFSSPNSTYTTPNSHTFDTPTISQLI 56
Query: 91 SKEEEAYEIDGDKLENVLSLLQSSVDGYLESSLDSFELDLHEDFVLKVLETPLVLGENLV 150
+K+ + K N SLLQ F + D +L
Sbjct: 57 AKQHWSKLKTIVKETNPSSLLQHL-----------FNSEAQPDLIL-------------- 91
Query: 151 CFFKWVTS--GVVDA------LLKAICSSVGKKEVYALWDIVKEIGEKEK---------- 192
C+FKW G + LL + ++ ++ AL D +
Sbjct: 92 CYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVL 151
Query: 193 ---GVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
G I++ L+ + K G+ A E F++ GDYG + + + +L +
Sbjct: 152 GSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIG 211
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
SV ++MI + +I+ CK GK ++A V + P +I
Sbjct: 212 VVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTII 271
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMI 365
C+ + K D E I P F+ +I CR ++V AK + +M
Sbjct: 272 DGYCKAGKMFKA-----DALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQ 326
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
+G P +NS+I+ G + A+ + M GLKP+V TY L++G+ ++
Sbjct: 327 RQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLK 386
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
EA E+L++ K + +T++TLI Y K D A L + M D GV PNV YN LI
Sbjct: 387 EAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLI 446
Query: 486 QSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
C + + + A KL ++M GL + +T ++
Sbjct: 447 VGFCREG-NVKEARKLAKEMEGNGLKADLVTYNIL 480
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 166/378 (43%), Gaps = 17/378 (4%)
Query: 145 LGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVL-TVEILNEL 203
+G N+V F D ++ +C VGK + D+V+++ K G +V N +
Sbjct: 225 IGVNVVTF---------DVVINGLCK-VGKFQKAG--DVVEDM--KAWGFSPSVITYNTI 270
Query: 204 IALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGS 263
I + K GK A + + N+ T+ I+ R + A V E+M G
Sbjct: 271 IDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGL 330
Query: 264 LPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLAL 323
P+ +I+ C GK EA + + P LI+ C++ + +K A
Sbjct: 331 QPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKK-KMLKEAR 389
Query: 324 DMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAY 383
+MLDD + F+++I + + + A L S M+ G P + +N +I +
Sbjct: 390 EMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGF 449
Query: 384 SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
+ G++ A ++ K M GLK D+ TY L+ G+ +A +L+E + S
Sbjct: 450 CREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSH 509
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
+TY+ LI GY + AL + M+ G + N+ YN LI+ C K A +LL
Sbjct: 510 LTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKG-KLEEANRLLN 568
Query: 504 DMRLKGLHLNGITRALIR 521
+M KGL N T ++R
Sbjct: 569 EMLEKGLIPNRTTYDILR 586
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 155/357 (43%), Gaps = 13/357 (3%)
Query: 167 AICSSVGK-----KEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
A C+S+ K V W + K G V V LI + ++GK + V
Sbjct: 199 ACCNSLSKDLLKGNRVELFWKVYK--GMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLF 256
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ GC+ N TY I L R D A + M G LPD+ +I FC+
Sbjct: 257 DMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQK 316
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
++ E + + P LI+ ++ + + A + ++ ARK + F
Sbjct: 317 RSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSD-IGGAFQVKEEMF--ARKIKLNTF 373
Query: 342 S--SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
+ ++I LC++ D+ A+ L S+M G P +N +I Y K +M A E+L +
Sbjct: 374 TYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEI 433
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
+ L + Y +++G + G + A E+ E + + V Y T+++G K F
Sbjct: 434 KKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRF 493
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ A+K+L MKD G+ P+V YN +I C KA + L +M KGL N T
Sbjct: 494 EEAIKILGVMKDQGLSPDVFCYNTVIIGFC-KAGKMEEGKSYLVEMIAKGLKPNVYT 549
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 156/380 (41%), Gaps = 15/380 (3%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
A++ +C L+ + G K V+ I+ L+ K G+ + A ++
Sbjct: 447 AIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLV----KEGRFEEAIKILGV 502
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
D G + Y I + + S +MI G P+ G I +C+ G+
Sbjct: 503 MKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGE 562
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+ A + + + P + LI C++ T K A + ++ S
Sbjct: 563 MQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTK-AFAKFRCMLDQGVLPDVQTHS 621
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+I L + + A + S+++ +G P + S+IS K GD+ A E+ M +
Sbjct: 622 VLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKK 681
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G+ P++ TY L++G G++ +A E+ + + + VTY T+I GYCK A
Sbjct: 682 GINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEA 741
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRA 522
+L + MK VGV P+ Y LI C KA + A L M +G+ ALI
Sbjct: 742 FQLFHGMKLVGVPPDSFVYCALIDG-CCKAGNTEKALSLFLGMVEEGIASTPAFNALIDG 800
Query: 523 ---------VKELEEDAIEN 533
+L ED ++N
Sbjct: 801 FFKLGKLIEAYQLVEDMVDN 820
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 126/290 (43%), Gaps = 8/290 (2%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI+ K G KAAFE+ + G N TY I L + A + + + E G
Sbjct: 658 LISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKG 717
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK-- 320
+S II+ +CK EA ++ + + P V LI C+ T K
Sbjct: 718 LARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKAL 777
Query: 321 -LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
L L M+++ G A A F+++I ++ + A L+ M+ P + + +
Sbjct: 778 SLFLGMVEE--GIASTPA---FNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTIL 832
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I + G++ A ++ M+ R + P+V TYT L+ GY G+ E + +E
Sbjct: 833 IEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGI 892
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + + ++ + K + ALKL+++M GV + Y LI +LC
Sbjct: 893 KPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALC 942
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 128/308 (41%), Gaps = 6/308 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+AL+ +C + L+D + E G V + +IA + K AF++F+
Sbjct: 691 NALINGLCKLGEIAKARELFDGIPEKGLARNSV----TYSTIIAGYCKSANLTEAFQLFH 746
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G + Y I+ + + A S+ M+E G + + +I F K G
Sbjct: 747 GMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEG-IASTPAFNALIDGFFKLG 805
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
K EA+ + + + P LI C +K A + + + +
Sbjct: 806 KLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVG-NIKEAEQLFMEMQKRNVMPNVLTY 864
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+S++ R+ +L +M++ G P + ++ ++ A+ K G+ A++++ M S
Sbjct: 865 TSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLS 924
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+ YT L+ + E ++L+E +K S+LS T TL+ + + D
Sbjct: 925 EGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDE 984
Query: 462 ALKLLNEM 469
AL++L M
Sbjct: 985 ALRVLESM 992
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 133/314 (42%), Gaps = 45/314 (14%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A ++ + + GCV + Y I S+ K F A+ +M++ LP I+
Sbjct: 29 ARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 88
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGE 332
CK G+ K+A + R+K P ++ LC+E DE K ML++ +
Sbjct: 89 GLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKK----MLEEMAVR 144
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
+ ++S I+ LC+ V A+ L++M P + +VI+ K+GD+ A
Sbjct: 145 GYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSA 201
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL--- 449
ML M +RG PDV TY+ L+ G+ GG++E A +L+ K R + V Y++L
Sbjct: 202 SRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGA 261
Query: 450 --------------------------------IRGYCKLEEFDCALKLLNEMKDVGVQPN 477
I G CK E A + + M + G PN
Sbjct: 262 LHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPN 321
Query: 478 VDEYNKLIQSLCLK 491
Y+ L++ LC K
Sbjct: 322 ASSYSMLVEELCKK 335
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 131/296 (44%), Gaps = 8/296 (2%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
TV ++ K G+ K A ++ ++ D GC N TY +E L + D A +
Sbjct: 79 TVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKML 138
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLC 313
E+M G PD I CK + EA LAR M VV++ +I+ LC
Sbjct: 139 EEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKF--LAR---MPVTPDVVSYTTVINGLC 193
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
+ + + A MLD + + +SS+I C+ +V A LL M+ G P
Sbjct: 194 KSGD-LDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNM 252
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+NS++ A + G + A +ML M RG PDV +Y + G ++++A + +
Sbjct: 253 VAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDR 312
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + +Y L+ CK +E D A+ L+ + ++ ++ Y L+ LC
Sbjct: 313 MVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLC 368
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F+ ++R LCR + A+ LL +M G P +A++N++IS YSKA D A + L M
Sbjct: 13 FAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMV 72
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
P V TYT ++ G G+ ++A ++L+E + + TY+ ++ G C+ + D
Sbjct: 73 KNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLD 132
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A K+L EM G P+V YN I+ LC
Sbjct: 133 EAKKMLEEMAVRGYFPDVVTYNSFIKGLC 161
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 161/366 (43%), Gaps = 28/366 (7%)
Query: 159 GVVDALLKAIC--SSVGKKEVYALWDIVKEIGEKEKGVLTVE---------ILNELIALF 207
G++D++LK C + V + + IG+ E ++ +E N I
Sbjct: 238 GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGL 297
Query: 208 SKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDS 267
K + K A VF++ + GC N +Y +E L ++K D A ++ E+ E + D
Sbjct: 298 CKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDI 357
Query: 268 EKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVV-AFLISSLC---QEDETVKLAL 323
++ CKGG+ EA +++ ++K+ P ++ S C Q D+ +++
Sbjct: 358 LLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHK 417
Query: 324 DMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAY 383
ML E + ++ ++ LC + A+T+L M+ EG P + +++ A
Sbjct: 418 QML-----ERNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAM 472
Query: 384 SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
K G A+E+ + G PDV TY+ L++G + EEA + ++L
Sbjct: 473 CKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLF-------TKLDV 525
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
++ +I GY + D LKL E+ + V+PN + K I +KA A L
Sbjct: 526 ALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLF- 584
Query: 504 DMRLKG 509
D +KG
Sbjct: 585 DRAVKG 590
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 81/154 (52%), Gaps = 3/154 (1%)
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
MI + P F ++ ++ + A ++L M+ G PD Y L+SGY+
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
+A + L E KNH + VTY ++ G CK A+KLL+EM+D G PN+ YN
Sbjct: 61 FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120
Query: 484 LIQSLC-LKALDWRTAEKLLEDMRLKGLHLNGIT 516
+++ LC + LD A+K+LE+M ++G + +T
Sbjct: 121 IVEGLCEERKLD--EAKKMLEEMAVRGYFPDVVT 152
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 123/275 (44%), Gaps = 16/275 (5%)
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
MI+ PD+ ++ C+ + ++A + +E P ++ LIS + +
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
+ A L + + +++++ LC+ A LL +M +G P +N
Sbjct: 61 FGQ-AFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYN 119
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
++ + + A +ML+ M RG PDV TY + G C+ ++EA+K
Sbjct: 120 VIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCK-------CDRVDEARKF 172
Query: 438 HSRLSPVT-----YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
+R+ PVT Y T+I G CK + D A ++L++M + G P+V Y+ LI C K
Sbjct: 173 LARM-PVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFC-KG 230
Query: 493 LDWRTAEKLLEDMRLKGLHLNGIT-RALIRAVKEL 526
+ A LL+ M G N + +L+ A+ L
Sbjct: 231 GEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRL 265
>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Brachypodium distachyon]
Length = 642
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 152/332 (45%), Gaps = 8/332 (2%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
TV + N L+ + A V++ G N TY I+AL + A +
Sbjct: 126 TVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRML 185
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
++M G PD IIS CK + EA + +M P + ++ +LC +
Sbjct: 186 DEMARKGCRPDEVSHTTIISALCKLDRLDEARGILA-----EMTPVGASYNAVVHALCGQ 240
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
++ L ++D+ + ++S++ + C+ +++ A +L++M++EG P
Sbjct: 241 FRMREVFL-VVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQT 299
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
F ++ + G + A+ M M + G P +Y L+ G + G ++ A + +
Sbjct: 300 FTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMG 359
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
K+ TY TLI G+ K + D A+ + N+M + G +PNV Y ++ LC K + +
Sbjct: 360 KSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVM-F 418
Query: 496 RTAEKLLEDMRLKGLHLNGIT-RALIRAVKEL 526
AE L++ M L+ N +T LIR++ +L
Sbjct: 419 DQAENLIDKMSLENCPPNTLTFNTLIRSLCDL 450
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 148/343 (43%), Gaps = 19/343 (5%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+A++ A+C +EV+ + D + G + V I + F K + + A +
Sbjct: 231 NAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSI----VGAFCKARELRMACAILA 286
Query: 222 KFGDYGCVANQETYYFTIEAL-SRRKIFD----WAWSVCEKMIETGSLPDSEKVGKIISW 276
+ GCV N +T+ ++ K+ D W W M+ G P + +I
Sbjct: 287 RMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNW-----MVAEGWAPSTISYNVLIRG 341
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
C G K A V++ + P + LI + + + +A+ + +D + K
Sbjct: 342 LCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGD-LDVAMSIWNDMTNAGCKP 400
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ +++++ LC+ A+ L+ KM E PP FN++I + G A+ +
Sbjct: 401 NVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVF 460
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
MR G P+ TY L+ G G E+A +L E + LS V+Y+T I G C++
Sbjct: 461 HGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQM 520
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC----LKALDW 495
A+ LL M G+QP+ +N +I + C ++A W
Sbjct: 521 RMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAW 563
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 120/258 (46%), Gaps = 5/258 (1%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V + LI FSK G A ++N + GC N Y ++ L ++ +FD A ++ +
Sbjct: 367 VRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLID 426
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
KM P++ +I C G+A A V+ R P L+ L +E
Sbjct: 427 KMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREG 486
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ AL ML + + ++ +++ I LC+M+ + A LL +MI +G P F
Sbjct: 487 NC-EDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTF 545
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N++I AY K G++ A ML M + ++ YT LMSG + ++++A L K
Sbjct: 546 NAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYL--LKM 603
Query: 437 NHSRLSP--VTYHTLIRG 452
+ + P T++ L+RG
Sbjct: 604 LYEGICPNEATWNVLVRG 621
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 129/294 (43%), Gaps = 13/294 (4%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI +G K A VF+ G C+ + TY I+ S+ D A S+ M
Sbjct: 336 NVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTN 395
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEA-HVVYTLAREKKMYPPQSVV-AFLISSLCQEDET 318
G P+ ++ CK +A +++ ++ E PP ++ LI SLC
Sbjct: 396 AGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLEN--CPPNTLTFNTLIRSLCDLGRA 453
Query: 319 VKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
+ L+ F G R+Y P ++ ++ L R + A +L++M++ G
Sbjct: 454 GR----ALNVFHG-MRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLV 508
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
+N+ IS + + AM +L M +G++PD +T+ ++ Y G + A +L
Sbjct: 509 SYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRM 568
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ + V Y +L+ G C + D A+ L +M G+ PN +N L++ +
Sbjct: 569 DAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRGI 622
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P V+N ++ A + + + + MR G++P+VYTY L+ ++ A +
Sbjct: 125 PTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRM 184
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
L+E + R V++ T+I CKL+ D A +L EM VG YN ++ +LC
Sbjct: 185 LDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVGAS-----YNAVVHALC 238
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 69/160 (43%), Gaps = 6/160 (3%)
Query: 366 SEGPPPGNAV---FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG 422
S P G A+ + + + AGD+ L+ MR RG+ + +A G
Sbjct: 45 SPAPNAGEALARAHEATVRRLAAAGDLDGVQYTLQEMRLRGVACPEGALVAAICAFARAG 104
Query: 423 QMEEACEILNEAKKNHSRLSPV--TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
+ A + A+ + +P Y+ L+ + + + + M+ GV+PNV
Sbjct: 105 AADRALKTFYRARHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYT 164
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
YN LI++LC + A ++L++M KG + ++ I
Sbjct: 165 YNLLIKALC-QNDRVGAARRMLDEMARKGCRPDEVSHTTI 203
>gi|299471515|emb|CBN80001.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 687
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 167/353 (47%), Gaps = 9/353 (2%)
Query: 167 AICSSVGK-KEVYALWDIVKEIGEKEKGVLT-VEILNELIALFSKLGKGKAAFEVFNKFG 224
A CS G+ KE D++ ++ +G+ V N IA S G+ K A ++ +
Sbjct: 153 AACSKGGRWKEAM---DLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMV 209
Query: 225 DYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAK 284
G N TY I A ++ + ++ A + E++IE G P + +I KGG+
Sbjct: 210 AQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWL 269
Query: 285 EAHVVYTLAREKKMYPPQSVVAFL-ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
EA + L + P V+++ + + C K A+D+L+ + + ++S
Sbjct: 270 EAMDL--LGQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNS 327
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
I + + A LL +M + G P +NS +A + G A+E+LK M ++G
Sbjct: 328 AIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQG 387
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
+ P+ +Y + A GGQ E+A ++L S +++++ I + ++++ A+
Sbjct: 388 IAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAV 447
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+LL EM G+ PNV YN I++ C ++ W+ A L +M +GL N +T
Sbjct: 448 ELLREMPTAGLTPNVITYNSAIEA-CGRSARWQEAMGLFREMPTRGLSPNVVT 499
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 141/308 (45%), Gaps = 10/308 (3%)
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
+ A ++F G + +Y I A S + + A + +M G PD
Sbjct: 92 RTALAALDEFKISGGSLDTTSYNIAIAACSNGRQWATAVRLLREMPTEGVTPDVVTYNSA 151
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS-----SLCQEDETVKLALDMLDD 328
I+ KGG+ KEA + T + + P + + +++ + C K A+D+L+
Sbjct: 152 IAACSKGGRWKEAMDLLT----QMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQ 207
Query: 329 FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD 388
+ + ++S I + + + A LL ++I +G PP +N VI A +K G
Sbjct: 208 MVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGR 267
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHT 448
AM++L M + + DV +Y+ +++ G + +EA ++L + + + ++Y++
Sbjct: 268 WLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNS 327
Query: 449 LIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLK 508
I K + + AL LL EM VG+ P V YN + C W A +LL++M +
Sbjct: 328 AIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAA-CAVNGRWVEALELLKEMPAQ 386
Query: 509 GLHLNGIT 516
G+ N I+
Sbjct: 387 GIAPNTIS 394
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 148/335 (44%), Gaps = 20/335 (5%)
Query: 194 VLTVEILNELIA---LFSKLGKG---KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKI 247
+LT +I ++I+ + + G+G K A ++ + G N +Y I+A ++
Sbjct: 278 MLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDR 337
Query: 248 FDWAWSVCEKMIETGSLPDSEKVGKIISW-FCKGGKAKEAHVVYTLAREKKMYPPQSVVA 306
+ A + +M G +P +IS+ A V L K+M P Q +
Sbjct: 338 WKEALDLLREMTTVGLVP------TVISYNSATAACAVNGRWVEALELLKEM-PAQGIAP 390
Query: 307 FLIS-----SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLL 361
IS C + + A+ +L S I F+S I + R + A LL
Sbjct: 391 NTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELL 450
Query: 362 SKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG 421
+M + G P +NS I A ++ AM + + M +RGL P+V TY ++ A G
Sbjct: 451 REMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKG 510
Query: 422 GQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEY 481
Q E A ++L ++Y++ I K E+++ AL+LL M G +P++ Y
Sbjct: 511 EQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISY 570
Query: 482 NKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
N + + C K+ WR A LL+DM GL N ++
Sbjct: 571 NSAVTA-CAKSGRWREALGLLKDMATVGLTPNTVS 604
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 138/322 (42%), Gaps = 12/322 (3%)
Query: 194 VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWS 253
V TV N A + G+ A E+ + G N +Y ++A ++ ++ A
Sbjct: 354 VPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVK 413
Query: 254 VCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS--- 310
+ M GS PD I C G+ ++ L RE P + +I+
Sbjct: 414 LLRGMSTVGSDPDIISFNSAID-AC--GRGQQWETAVELLRE---MPTAGLTPNVITYNS 467
Query: 311 --SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
C + A+ + + + ++S+I + + + A LL+ M + G
Sbjct: 468 AIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARG 527
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P +NS I A K A+++LK M +RG KPD+ +Y ++ A G+ EA
Sbjct: 528 VAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREAL 587
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+L + + V+Y I K E++D A+++L EM+ G PN+ Y+ I +
Sbjct: 588 GLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDA- 646
Query: 489 CLKALDWRTAEKLLEDMRLKGL 510
C K W+ A LL D+R +GL
Sbjct: 647 CAKQGRWKEAVDLLTDLRRQGL 668
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 123/288 (42%), Gaps = 1/288 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N + +K G+ + A ++ G + ++ I+A R + ++ A + +M
Sbjct: 396 NSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPT 455
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ I + + +EA ++ + + P +I + C + E +
Sbjct: 456 AGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDA-CAKGEQWE 514
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
LA+ +L + ++S I + + + A LL M + GP P +NS +
Sbjct: 515 LAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAV 574
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+A +K+G A+ +LK M + GL P+ +Y + G Q + A IL E + + +
Sbjct: 575 TACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGAT 634
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ +TY I K + A+ LL +++ G+ P+ Y +I +
Sbjct: 635 PNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQTYLTVISAF 682
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 3/153 (1%)
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
S G P + V I +K D A+ L + G D +Y ++ +NG Q
Sbjct: 68 SRGGKPKSLVKLKSILLEAKGRDWRTALAALDEFKISGGSLDTTSYNIAIAACSNGRQWA 127
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM--KDVGVQPNVDEYNK 483
A +L E VTY++ I K + A+ LL +M G+ P+V YN
Sbjct: 128 TAVRLLREMPTEGVTPDVVTYNSAIAACSKGGRWKEAMDLLTQMVAPTEGITPDVVTYNS 187
Query: 484 LIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
I + C W+ A LLE M +G+ N IT
Sbjct: 188 AIAA-CSNGGRWKEAMDLLEQMVAQGVPPNLIT 219
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 150/322 (46%), Gaps = 10/322 (3%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V N+L+ LG+ + A + ++ GC+ + TY F ++ L R + D A ++
Sbjct: 247 VNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAM-- 304
Query: 257 KMIETGSLPDSEKV--GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
G LP+ V +I GK A +Y + K P + L+ LC+
Sbjct: 305 ----LGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCK 360
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
A+ MLD+ + I +S+++ S CR A+ +L +M+++G +
Sbjct: 361 LGR-FGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQ 419
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
+N +I A K G + A +++ M+S+G KPD+ TY ++ N MEEA I
Sbjct: 420 GYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNL 479
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
+ + +TY+TLI + + L+L +EM G Q +V YN LI++LC K +
Sbjct: 480 IEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALC-KEGN 538
Query: 495 WRTAEKLLEDMRLKGLHLNGIT 516
+ LLE+M KG+ N +
Sbjct: 539 VDRSMALLEEMVTKGIKPNNFS 560
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 140/319 (43%), Gaps = 42/319 (13%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
KLG+ +A + ++ + GC N TY + + R ++D A ++ ++M+ G +
Sbjct: 358 LCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMN 417
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED---------- 316
S+ II CK GK +A + + + P +I LC D
Sbjct: 418 SQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFR 477
Query: 317 ----------------------------ETVKLALDMLDDFSGEARKYAIKPFSSVIRSL 348
E ++LA +ML + + ++ +I++L
Sbjct: 478 NLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLL----HGCQLDVISYNGLIKAL 533
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
C+ +V + LL +M+++G P N +N +I+ KAG + A+E+ K M ++GL PD+
Sbjct: 534 CKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDI 593
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNE 468
TY L++G G A +L + + VTY+ LI +CK+ D A LL++
Sbjct: 594 VTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDK 653
Query: 469 MKDVGVQPNVDEYNKLIQS 487
G+ PN + ++Q+
Sbjct: 654 AISGGIVPNERTWGMMVQN 672
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 136/321 (42%), Gaps = 13/321 (4%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
+LG+ A + +GCV + Y I AL + A + ++M+ G D
Sbjct: 187 LCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAAD 246
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC---QEDETVKLAL 323
++ C G+ +EA + + P FL+ LC Q DE +
Sbjct: 247 VNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAML- 305
Query: 324 DMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAY 383
G + + ++VIR + A L M S+G PP ++ ++
Sbjct: 306 -------GRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGL 358
Query: 384 SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
K G A+ ML M +G P++ TY+ L+ + G ++A +L++ ++
Sbjct: 359 CKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNS 418
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
Y+ +I CK + D A +L+ EMK G +P++ YN +I LC L AE +
Sbjct: 419 QGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDL-MEEAEHIFR 477
Query: 504 DMRLKGLHLNGIT-RALIRAV 523
++ +G+ NGIT LI A+
Sbjct: 478 NLIEEGVVANGITYNTLIHAL 498
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 155/367 (42%), Gaps = 15/367 (4%)
Query: 151 CFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKL 210
C VT G LL+ +C + E A+ + E+ V +LN +I
Sbjct: 278 CMPSVVTYGF---LLQGLCRTRQADEACAMLGRLPEV--------NVVMLNTVIRGCLTE 326
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
GK A E++ G GC + TY + L + F A + ++M E G P+
Sbjct: 327 GKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTY 386
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
++ FC+ G +A + K +I +LC+ D + A ++ +
Sbjct: 387 STLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCK-DGKLDQATRLVQEMK 445
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
+ K I ++++I LC + A+ + +I EG +N++I A + G
Sbjct: 446 SQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQ 505
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
+ + M G + DV +Y GL+ G ++ + +L E + + +Y+ LI
Sbjct: 506 EGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLI 565
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW-RTAEKLLEDMRLKG 509
CK + AL+L EM + G+ P++ YN LI LC + W A LLE + +
Sbjct: 566 NELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLC--KVGWTHAALNLLEKLPNEN 623
Query: 510 LHLNGIT 516
+H + +T
Sbjct: 624 VHPDIVT 630
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 76/173 (43%), Gaps = 9/173 (5%)
Query: 322 ALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLL-SKMISEGPPPGNAVF 376
AL +LD R++A+ P ++ V+ +L R D H LL +M+ + PP F
Sbjct: 125 ALHLLDQMP---RRFAVSPSFRSYNVVLSTLAR-ADCHADALLLYRRMLRDRVPPTTFTF 180
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
A + G A+ +L+ M G PD Y ++ G + EA +L+E
Sbjct: 181 GVAARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLL 240
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
T++ L+ G C L A +L++ M G P+V Y L+Q LC
Sbjct: 241 MGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLC 293
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 84/207 (40%), Gaps = 32/207 (15%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F R+LCR+ A LL M G P ++ +VI A G + A +L M
Sbjct: 180 FGVAARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEML 239
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G DV T+ L+ G G++ EA +++ S VTY L++G C+ + D
Sbjct: 240 LMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQAD 299
Query: 461 CALKLLNEMKDV-------------------------------GVQPNVDEYNKLIQSLC 489
A +L + +V G P+V Y+ L+ LC
Sbjct: 300 EACAMLGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLC 359
Query: 490 LKALDWRTAEKLLEDMRLKGLHLNGIT 516
K + +A ++L++M KG N +T
Sbjct: 360 -KLGRFGSAVRMLDEMEEKGCAPNIVT 385
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 153/325 (47%), Gaps = 3/325 (0%)
Query: 190 KEKGVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
K GV+ V L+ + F K G + A ++F + G + N+ TY ++ +
Sbjct: 296 KRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRL 355
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
D A + ++M+ G +P+ ++ CK GK A V +L + + + L
Sbjct: 356 DDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTL 415
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
I + + ALD+L++ + + + + ++I LC+++ + AK+LL KM G
Sbjct: 416 IHGHFMNKNSER-ALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCG 474
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P ++ +++ A+ KAG + A+ +L + GL+P+V TY L+ G G + EA
Sbjct: 475 LRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAI 534
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
++ ++ + Y TLI G+CK+ A+ L+NEM D G+ + Y LI
Sbjct: 535 SHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGH 594
Query: 489 CLKALDWRTAEKLLEDMRLKGLHLN 513
+K D + A L M GL L+
Sbjct: 595 -MKQGDLQGAFALKAKMIETGLQLD 618
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 134/316 (42%), Gaps = 37/316 (11%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI + K G+ + + ++ GC A+ TY I S+ + A+S +M
Sbjct: 238 NSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKR 297
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G + + + + FCK G +EA ++ R + M P
Sbjct: 298 LGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMP-------------------- 337
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
++F+ ++S++ C+ + A LL +M+ +G P + ++
Sbjct: 338 ------NEFT----------YTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMV 381
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
K G + A ++L LM G+K + YT L+ G+ E A ++LNE K
Sbjct: 382 DGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGME 441
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
L Y TLI G CK+++ D A LL++M D G++PN Y ++ + KA A
Sbjct: 442 LDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAF-FKAGKESEAVA 500
Query: 501 LLEDMRLKGLHLNGIT 516
LL + GL N +T
Sbjct: 501 LLHKIPDSGLQPNVVT 516
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 115/257 (44%), Gaps = 1/257 (0%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A ++ N+ + G + Y I L + + D A S+ KM + G P++ I+
Sbjct: 428 ALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMD 487
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
F K GK EA + + + P LI LC+ + A+ D
Sbjct: 488 AFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYE-AISHFDKMRELGLD 546
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
++ ++++I C++ + A L+++M+ +G V+ S+I + K GD+ A +
Sbjct: 547 PNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFAL 606
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
M GL+ D+Y YT +SG+ N M+EA +L+E Y+ LIR Y K
Sbjct: 607 KAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQK 666
Query: 456 LEEFDCALKLLNEMKDV 472
L + A L NEM+ V
Sbjct: 667 LGNMEEASSLQNEMESV 683
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 77/157 (49%), Gaps = 1/157 (0%)
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
L+ ++ P P FN VI K G++ A + M++ G PDV TY L+ GY
Sbjct: 186 LVRRLFEHLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYG 245
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
G++EE +++E +K+ VTY+ LI + K + A EMK +GV NV
Sbjct: 246 KCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVV 305
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ + + C + L R A KL MR++G+ N T
Sbjct: 306 TLSTFVDAFCKEGL-VREAMKLFAQMRVRGMMPNEFT 341
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 1/180 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F+ VI LC+ ++ A+ L +M + G P +NS+I Y K G++ ++ MR
Sbjct: 202 FNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMR 261
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G DV TY L++ ++ G +E+A E K+ + VT T + +CK
Sbjct: 262 KSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVR 321
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
A+KL +M+ G+ PN Y L+ C KA A LL++M +GL N +T ++
Sbjct: 322 EAMKLFAQMRVRGMMPNEFTYTSLVDGTC-KAGRLDDAIVLLDEMVHQGLVPNVVTYTVM 380
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 139/325 (42%), Gaps = 26/325 (8%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+ + L++L + G A + N T + L+R + + ++
Sbjct: 135 VFDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNR----QGGLVRRL 190
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSL--CQ 314
E P+ +I + CK G+ EA ++ R K M VV + LI C
Sbjct: 191 FEHLPAPNVFTFNIVIDFLCKQGELVEARALFV--RMKAMGCSPDVVTYNSLIDGYGKCG 248
Query: 315 EDETVKLALDMLDDFSGEARKYA----IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
E E V+L + E RK + ++++I + + A + +M G
Sbjct: 249 ELEEVELLVS-------EMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVM 301
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
++ + A+ K G + AM++ MR RG+ P+ +TYT L+ G G++++A +
Sbjct: 302 ANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVL 361
Query: 431 LNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
L+E H L P VTY ++ G CK + A +L+ M+ GV+ N Y LI
Sbjct: 362 LDEMV--HQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGH 419
Query: 489 CLKALDWRTAEKLLEDMRLKGLHLN 513
+ R A LL +M+ KG+ L+
Sbjct: 420 FMNKNSER-ALDLLNEMKNKGMELD 443
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 4/147 (2%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+ +C + E + +D ++E+G V++ LI F K+G A + N+
Sbjct: 519 ALIDGLCKAGSIYEAISHFDKMRELGLDPN----VQVYTTLIDGFCKIGSLSKAVHLMNE 574
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
D G ++ Y I+ ++ A+++ KMIETG D IS FC
Sbjct: 575 MVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNM 634
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLI 309
+EA V + + P ++ LI
Sbjct: 635 MQEARGVLSEMIGTGITPDKTAYNCLI 661
>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
Length = 748
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 153/356 (42%), Gaps = 24/356 (6%)
Query: 147 ENLVCFFKWVTSGVV------DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEIL 200
E++ F + +SG++ ++ + A+C KE ++D + G K
Sbjct: 245 ESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPN-------- 296
Query: 201 NELIALFSKLGKGKAAFEVF-------NKFGDYGCVANQETYYFTIEALSRRKIFDWAWS 253
I +S L G AA F N G V N + I A +R + D A
Sbjct: 297 ---IISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAML 353
Query: 254 VCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC 313
+ E M G +PD+ +IS C+ G+ +A + + + P ++V LI C
Sbjct: 354 IFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCC 413
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
E VK + + + + +K FSS+I +L + V K ++ M+ G P
Sbjct: 414 NHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNV 473
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
FNS++ Y G+M A +L M S G++P+ Y Y L+ GY G++++A + +
Sbjct: 474 VTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRD 533
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + V Y+ ++ G + A K+ +EM + G ++ Y ++ LC
Sbjct: 534 MLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLC 589
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 142/323 (43%), Gaps = 8/323 (2%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
T+ N LI + ++ + + A VF + G + +Y I+ S+ D A+ +
Sbjct: 121 TIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELF 180
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI---SSL 312
KMIE PD +I CK + ++ V + + P LI S+
Sbjct: 181 YKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTA 240
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
E+V++ +M S + +S I +LCR + AK + M+ +GP P
Sbjct: 241 GMWKESVRVFKEM----SSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPN 296
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+++++ Y+ G ++ LM S+G+ P+ + L++ YA G M++A I
Sbjct: 297 IISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFE 356
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
+ + VT+ T+I C++ D AL N M D+GV P+ Y LIQ C
Sbjct: 357 DMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHG 416
Query: 493 LDWRTAEKLLEDMRLKGLHLNGI 515
+ A++L+ +M K + G+
Sbjct: 417 -ELVKAKELISEMMNKDIPPPGV 438
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
P +YTY L+ Y + E A + + +Y+TLI G+ K E D A +L
Sbjct: 120 PTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYEL 179
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+M + V P+V YN LI LC K + +E++LE M G+ N T
Sbjct: 180 FYKMIEQSVSPDVVTYNSLIDGLC-KTKEMVKSERVLEQMVDAGIRPNNKT 229
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 55/290 (18%), Positives = 112/290 (38%), Gaps = 20/290 (6%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
++L++ C +E +AL D + IG + I L+ + K G+ A VF
Sbjct: 477 NSLMEGYCLVGNMEEAFALLDAMASIGIEP----NCYIYGTLVDGYCKNGRIDDALTVFR 532
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G Y + L + + A + +MIE+G+ + G ++ C+
Sbjct: 533 DMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNN 592
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
EA+++ L + M ++ F +IS++ + + A ++ S +
Sbjct: 593 CTDEANML--LEKLFAMNVKFDIITFNIVISAMLKVGRRQE-AKELFAAISTYGLVPTVH 649
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
++ +I +L + + A L + G P + + N ++ K ++ A L ++
Sbjct: 650 TYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKASNYLSII 709
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
L + T + L S ++ G+ E H +L P Y L
Sbjct: 710 DENNLTLEASTISLLASLFSREGKCRE-----------HIKLLPAKYQFL 748
>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62914, mitochondrial; Flags: Precursor
gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. EST gb|AA728420 comes from this gene
[Arabidopsis thaliana]
gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 528
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 150/324 (46%), Gaps = 8/324 (2%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
LN L+ F + A + ++ + G + T+ I L A ++ ++M+
Sbjct: 151 LNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMV 210
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ---ED 316
+ G PD G +++ CK G A + K+ + + +I SLC+ ED
Sbjct: 211 QRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 270
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ AL++ + + + + +SS+I LC A LLS MI P F
Sbjct: 271 D----ALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTF 326
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
+++I A+ K G + A ++ + M R + P+++TY+ L++G+ ++ EA ++L +
Sbjct: 327 SALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIR 386
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ VTY+TLI G+CK + D ++L EM G+ N Y LI +A D
Sbjct: 387 KDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGF-FQARDCD 445
Query: 497 TAEKLLEDMRLKGLHLNGITRALI 520
A+ + + M G+H N +T ++
Sbjct: 446 NAQMVFKQMVSVGVHPNILTYNIL 469
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 145/325 (44%), Gaps = 14/325 (4%)
Query: 176 EVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETY 235
E AL D + + G + V ++N L K G A + NK AN Y
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGL----CKRGDTDLALNLLNKMEAAKIEANVVIY 256
Query: 236 YFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE 295
I++L + + D A ++ +M G P+ +IS C G+ +A + + E
Sbjct: 257 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIE 316
Query: 296 KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRM 351
+K+ P + LI + ++ + VK + E K +I P +SS+I C +
Sbjct: 317 RKINPNLVTFSALIDAFVKKGKLVKA-----EKLYEEMIKRSIDPNIFTYSSLINGFCML 371
Query: 352 KDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTY 411
+ AK +L MI + P +N++I+ + KA + ME+ + M RGL + TY
Sbjct: 372 DRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTY 431
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
T L+ G+ + A + + + +TY+ L+ G CK + A+ + ++
Sbjct: 432 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 491
Query: 472 VGVQPNVDEYNKLIQSLCLKALDWR 496
++P++ YN +I+ +C KA W+
Sbjct: 492 STMEPDIYTYNIMIEGMC-KAGKWK 515
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 150/356 (42%), Gaps = 45/356 (12%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGD----YGCVANQETYYFTIEALSRRKIFDWAWSVC 255
++L++ +K+ K F++ FG+ G N TY I R A ++
Sbjct: 81 FSKLLSAIAKMNK----FDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALL 136
Query: 256 EKMIETGSLPDSEKVGKIISWFCKG----------------------------------- 280
KM++ G PD + +++ FC G
Sbjct: 137 GKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLH 196
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
KA EA + ++ P +++ LC+ +T LAL++L+ + +
Sbjct: 197 NKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDT-DLALNLLNKMEAAKIEANVVI 255
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+S+VI SLC+ + A L ++M ++G P ++S+IS G + A +L M
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
R + P++ T++ L+ + G++ +A ++ E K + TY +LI G+C L+
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A ++L M PNV YN LI C KA +L +M +GL N +T
Sbjct: 376 EAKQMLELMIRKDCLPNVVTYNTLINGFC-KAKRVDKGMELFREMSQRGLVGNTVT 430
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
I +S++ C + A L+ +M+ G P F ++I + A+ ++
Sbjct: 148 IVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALID 207
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M RG +PD+ TY +++G G + A +LN+ + + V Y T+I CK
Sbjct: 208 RMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYR 267
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT- 516
D AL L EM++ GV+PNV Y+ LI LC W A +LL DM + ++ N +T
Sbjct: 268 HEDDALNLFTEMENKGVRPNVITYSSLISCLCNYG-RWSDASRLLSDMIERKINPNLVTF 326
Query: 517 RALIRA 522
ALI A
Sbjct: 327 SALIDA 332
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 137/284 (48%), Gaps = 2/284 (0%)
Query: 226 YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKE 285
+GC + +Y ++ L K + + E+M+ G P+ +I + C+ G +
Sbjct: 219 FGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFER 278
Query: 286 AHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVI 345
H V + P + A ++ +C+E +++A ++LD K + +++V+
Sbjct: 279 VHQVLAQMVDHGCTPDIRMYATVLDGVCKEGH-LEVAHEILDRMPSYGLKPNVVCYNTVL 337
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
+ LC + A+ LL++M P + FN ++ + + G + +E+L+ M G
Sbjct: 338 KGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCV 397
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
PDV TYT +++G+ G ++EA +L R + ++Y +++G C E + A L
Sbjct: 398 PDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDL 457
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
+++M + G PN +N +I LC K L + E LL+ M L G
Sbjct: 458 MSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIE-LLKQMLLNG 500
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 131/296 (44%), Gaps = 7/296 (2%)
Query: 209 KLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSE 268
K G + A E+ ++ YG N Y ++ L + ++ A + +M + D
Sbjct: 307 KEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDV 366
Query: 269 KVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDM 325
++ +FC+ G + E P +I+ C+E DE V L M
Sbjct: 367 TFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSM 426
Query: 326 LDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSK 385
+ R I ++ V++ LC + A+ L+S+MI +G P FN+VI+ K
Sbjct: 427 A---ACGCRPNTIS-YTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCK 482
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
G + A+E+LK M G PD+ +Y+ ++ G G+ +EA E+LN + +
Sbjct: 483 KGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTII 542
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
Y ++ K + +++ + ++DV ++ + YN +I SLC + R E L
Sbjct: 543 YSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFL 598
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 129/294 (43%), Gaps = 2/294 (0%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A E+ + D C + T+ ++ + + + E+M+E G +PD +I+
Sbjct: 349 AEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVIN 408
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
FCK G EA ++ P ++ LC + V A D++ +
Sbjct: 409 GFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVD-AEDLMSQMIEQGCS 467
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
F++VI LC+ V A LL +M+ G P +++VI KAG A+E+
Sbjct: 468 PNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALEL 527
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
L +M ++G+ P+ Y+ + S + G++ ++ + + R V Y+ +I CK
Sbjct: 528 LNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCK 587
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
D A++ L M G PN Y LI+ L + + A+++L ++ KG
Sbjct: 588 RGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGF-VKEAQEMLTELCSKG 640
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 127/324 (39%), Gaps = 79/324 (24%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF-LISSLCQEDETVKLALDMLDDFSG 331
++S +C+ G+ A LA + PP + F ++ +LC AL +LD+
Sbjct: 89 MVSGYCRAGQLASAR---RLAASVPV-PPNAYTYFPVVRALCARGRIAD-ALSVLDEMRR 143
Query: 332 EARKYAIKPFSSVI-------------RSLCR-MKDVHGAKTLLSKMISEGPPPGNAVFN 377
I P VI RS R ++D+HG L GN N
Sbjct: 144 RGCA-PIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDV--------GNC--N 192
Query: 378 SVISAYS-KAGDMTPAMEMLK-LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
V++A + G + A+ +L+ L S G PDV +Y ++ G + +++ E
Sbjct: 193 LVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMV 252
Query: 436 KNHSRLSPVTYHTLI-----------------------------------RGYCKLEEFD 460
+ + VT++TLI G CK +
Sbjct: 253 RVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLE 312
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT---- 516
A ++L+ M G++PNV YN +++ LC A W AE+LL +M L+ +T
Sbjct: 313 VAHEILDRMPSYGLKPNVVCYNTVLKGLC-SAERWEQAEELLAEMFDNDCPLDDVTFNIL 371
Query: 517 ------RALIRAVKELEEDAIENG 534
L+ V EL E +E+G
Sbjct: 372 VDFFCQNGLVYRVIELLEQMLEHG 395
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
Y ++SGY GQ+ A + A + TY ++R C AL +L+EM+
Sbjct: 86 YNAMVSGYCRAGQLASARRL---AASVPVPPNAYTYFPVVRALCARGRIADALSVLDEMR 142
Query: 471 DVGVQPNVDEYNKLIQSLCLK--ALDWRTAEKLLEDMRLKGLHLN 513
G P Y+ ++++ C + +R+A ++L+D+ +G L+
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALD 187
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 164/359 (45%), Gaps = 36/359 (10%)
Query: 168 ICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYG 227
+C ++ ++ + L+ +K +G V T IL I F K G + A F++ G
Sbjct: 298 LCEAMKVEKAFLLFQEMKSVGVNPD-VYTYTIL---IDSFCKAGLIEQARSWFDEMRSIG 353
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH 287
C AN TY + A + K A + +MI+ G P++ ++ CK G+ ++A
Sbjct: 354 CSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKAC 413
Query: 288 VVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY-AIKP----FS 342
VYT + + + ++ DF E + +I P +
Sbjct: 414 EVYT-------------------------KLIGTSDNVGSDFYFEGKHTDSIAPNVVTYG 448
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
++I LC+ V A+ LL M+S G P + +++++I + K G + A E+ M
Sbjct: 449 ALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKC 508
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G P V+TYT L+ +++ A ++L++ ++ + VTY +I G C++ E A
Sbjct: 509 GYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKA 568
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALI 520
LKLL+ M++ G PNV Y LI L K+ + +L M KG N +T R LI
Sbjct: 569 LKLLSMMEEKGCSPNVVTYTALIDGL-GKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLI 626
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 131/316 (41%), Gaps = 9/316 (2%)
Query: 181 WDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIE 240
W + E+E L + ++I+ + A ++ C+ N TY +
Sbjct: 91 WSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLT 150
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP 300
++K W + M++ G P+ ++ +C A+ + L R
Sbjct: 151 GFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKL--LKRMADCGC 208
Query: 301 PQSVVAF--LISSLCQEDET-----VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
P VA+ I S+C +E + LA + ++ + ++ R LC M
Sbjct: 209 PPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGK 268
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
A ++ M+ +G P + ++ VI+ +A + A + + M+S G+ PDVYTYT
Sbjct: 269 FDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTI 328
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
L+ + G +E+A +E + + VTY L+ Y K ++ A + N M D G
Sbjct: 329 LIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAG 388
Query: 474 VQPNVDEYNKLIQSLC 489
PN Y+ L+ LC
Sbjct: 389 CPPNTITYSALVDGLC 404
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 126/321 (39%), Gaps = 26/321 (8%)
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
+ N GC N + + + + + +A+ + ++M + G P I
Sbjct: 163 RIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSI 222
Query: 278 CKGGKAKEAHVVYTLARE--KKMYPPQSVV-----AFLISSLCQEDETVKLALDMLDDFS 330
C GG+ + + LA + ++M V+ A LC + +A ++
Sbjct: 223 C-GGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGK-FDMAFQIIKVMM 280
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
G+ +S VI LC V A L +M S G P + +I ++ KAG +
Sbjct: 281 GKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIE 340
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A MRS G +V TYT L+ Y Q+ +A +I N + +TY L+
Sbjct: 341 QARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALV 400
Query: 451 RGYCKLEEFDCAL----KLLNEMKDVG------------VQPNVDEYNKLIQSLCLKALD 494
G CK E A KL+ +VG + PNV Y LI LC KA
Sbjct: 401 DGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLC-KAHK 459
Query: 495 WRTAEKLLEDMRLKGLHLNGI 515
A++LL+ M G N I
Sbjct: 460 VVDAQELLDAMLSNGCEPNHI 480
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 157/369 (42%), Gaps = 47/369 (12%)
Query: 179 ALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFT 238
AL D + + GE +K E+ +LI +G + F K D N TY
Sbjct: 398 ALVDGLCKAGEIQKAC---EVYTKLIGTSDNVG---SDFYFEGKHTD-SIAPNVVTYGAL 450
Query: 239 IEALSR-RKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKK 297
I+ L + K+ D A + + M+ G P+ +I FCK GK A V+ +
Sbjct: 451 IDGLCKAHKVVD-AQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCG 509
Query: 298 MYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGA 357
P LI ++ +D + LA+ +L + + ++++I LCR+ + A
Sbjct: 510 YLPTVHTYTSLIDAM-FKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKA 568
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
LLS M +G P + ++I K+G + ++++ M ++G P+ TY L++
Sbjct: 569 LKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINH 628
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK--------LEEFDC-------- 461
G ++EA +L+E K+ + Y ++++G+ K LEE +
Sbjct: 629 CCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGLLEELESHGTVPIAP 688
Query: 462 -----------------ALKLLNEMKDVGVQPNV---DEYNKLIQSLCLKALDWRTAEKL 501
AL+L EM ++ N+ D Y LIQ+LCL A A +L
Sbjct: 689 VYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCL-ASQLEKAFEL 747
Query: 502 LEDMRLKGL 510
++ KG+
Sbjct: 748 YSEITRKGV 756
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 134/303 (44%), Gaps = 13/303 (4%)
Query: 225 DYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAK 284
D+G + TY ++ L+ D + V ++M E+G D VG CK G+
Sbjct: 33 DFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWS 92
Query: 285 EAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSV 344
+A V+ E++ + +V+ + S E A+ L + + + ++
Sbjct: 93 DALVMI----EREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTL 148
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
+ + K + K +++ M+ EG P ++FNS++ +Y A D A ++LK M G
Sbjct: 149 LTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGC 208
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR-------LSPVTYHTLIRGYCKLE 457
P Y + G GG+ + ++L A+K + L+ V R C +
Sbjct: 209 PPGYVAYN-IFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMG 267
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITR 517
+FD A +++ M G P+ Y+K+I LC +A+ A L ++M+ G++ + T
Sbjct: 268 KFDMAFQIIKVMMGKGFVPDTSTYSKVITFLC-EAMKVEKAFLLFQEMKSVGVNPDVYTY 326
Query: 518 ALI 520
++
Sbjct: 327 TIL 329
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 127/313 (40%), Gaps = 37/313 (11%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
I + LI F K+GK A EVF + G + TY I+A+ + + D A V +M
Sbjct: 481 IYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQM 540
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+E+ P+ +I C+ G+ ++A + ++ EK P LI L + +
Sbjct: 541 VESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGK- 599
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI------------- 365
V L+L + S + + +I C + A +LLS+M
Sbjct: 600 VDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCS 659
Query: 366 --------------------SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
S G P V+ +I +SKAG + A+E+ K M
Sbjct: 660 VVQGFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSS 719
Query: 406 PDVYT---YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
++ + YT L+ Q+E+A E+ +E + + LI+G K+ +++ A
Sbjct: 720 LNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEA 779
Query: 463 LKLLNEMKDVGVQ 475
L+L + D GV
Sbjct: 780 LQLCYSICDEGVN 792
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 140/298 (46%), Gaps = 10/298 (3%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A + K +GC A+ +Y ++ L K + + ++M+ P+ +I
Sbjct: 200 AVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIG 259
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
+ C+ G + H V E P + A +I +C+E L++ ++
Sbjct: 260 YLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGH-----LEVANEILNRMPS 314
Query: 336 YAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
Y +KP +++V++ LC + A+ LLS+M + P + FN ++ + + G +
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
+E+L+ M S G PDV TYT +++G+ G ++EA +L + + V+Y +++
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
G C + A +L+++M G PN +N LI LC K L + E LL+ M + G
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE-LLKQMLVNG 491
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 129/296 (43%), Gaps = 2/296 (0%)
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
K A E+ ++ C + T+ ++ + + D + E+M+ G +PD +
Sbjct: 338 KEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTV 397
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEA 333
I+ FCK G EA ++ P ++ LC V A +++ +
Sbjct: 398 INGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVD-AEELMSQMIQQG 456
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
F+++I LC+ V A LL +M+ G P +++VI KAG A+
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
E+L +M ++G+ P+ Y+ + + G++ + ++ + K R V Y+ +I
Sbjct: 517 ELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSL 576
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
CK E D A+ M G PN Y LI+ L + L + A++LL ++ +G
Sbjct: 577 CKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLA-KEAQELLSELCSRG 631
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 128/298 (42%), Gaps = 10/298 (3%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I K G + A E+ N+ YG N Y ++ L + + A + +M +
Sbjct: 292 IIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD 351
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETV 319
D ++ +FC+ G + P +I+ C+E DE V
Sbjct: 352 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAV 411
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
L L S K ++ V++ LC A+ L+S+MI +G PP FN++
Sbjct: 412 ML----LKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTL 467
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I+ K G + A+E+LK M G PD+ +Y+ ++ G G+ EEA E+LN
Sbjct: 468 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGI 527
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
+ + Y ++ + + +++ + +KD ++ + YN +I SLC + W T
Sbjct: 528 SPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKR---WET 582
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 151/363 (41%), Gaps = 46/363 (12%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ A EV ++ GC Y+ +EA R F + V E M G D+
Sbjct: 125 GRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNC 184
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS-VVAF--LISSLCQEDETVKLALDMLD 327
+++ C+ G EA L R+ + ++ +V++ ++ LC + +++D
Sbjct: 185 NLVLNAICEQGCVDEA---VGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE-ELMD 240
Query: 328 DFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG 387
+ I F+++I LCR +L++M G P ++ ++I K G
Sbjct: 241 EMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEG 300
Query: 388 DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV--- 444
+ A E+L M S GLKP+V Y ++ G + + +EA E+L+E + L V
Sbjct: 301 HLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFN 360
Query: 445 --------------------------------TYHTLIRGYCKLEEFDCALKLLNEMKDV 472
TY T+I G+CK D A+ LL M
Sbjct: 361 ILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSC 420
Query: 473 GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAV--KELEED 529
G +PN Y +++ LC A W AE+L+ M +G N +T LI + K L E
Sbjct: 421 GCKPNTVSYTIVLKGLC-SAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQ 479
Query: 530 AIE 532
AIE
Sbjct: 480 AIE 482
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 123/317 (38%), Gaps = 53/317 (16%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
N T++ + L R A V ++M G P I+ C+ G + + V
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169
Query: 291 TLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFSSVIRS 347
K +++++C++ DE V L L L F EA I +++V++
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGL-LRKLAFFGCEAD---IVSYNAVLKG 225
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
LC K + L+ +M+ P FN++I + G E+L M G PD
Sbjct: 226 LCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
+ Y T+I G CK + A ++LN
Sbjct: 286 IRMYA-----------------------------------TIIDGICKEGHLEVANEILN 310
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT----------R 517
M G++PNV YN +++ LC A W+ AE+LL +M K L+ +T
Sbjct: 311 RMPSYGLKPNVVCYNTVLKGLC-SAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369
Query: 518 ALIRAVKELEEDAIENG 534
L+ V EL E + +G
Sbjct: 370 GLVDRVIELLEQMLSHG 386
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 57/136 (41%), Gaps = 1/136 (0%)
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
PP F V+ G + A+E+L M +G P Y ++ G +
Sbjct: 108 PPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVR 167
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+L L + ++ C+ D A+ LL ++ G + ++ YN +++ LC
Sbjct: 168 VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLC 227
Query: 490 LKALDWRTAEKLLEDM 505
+ A W E+L+++M
Sbjct: 228 M-AKRWGDVEELMDEM 242
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 139/277 (50%), Gaps = 4/277 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI +S G + A ++ ++ + G N Y +E + + S + M+E G
Sbjct: 564 LIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKG 623
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+PD+ G +I G + A V ++ + + P + LIS C+ + K A
Sbjct: 624 LMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEK-A 682
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+ +LD+ + + + I ++++I C+ D+ A+ + + +I +G PP + ++I
Sbjct: 683 VGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDG 742
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA-KKNHSRL 441
Y KAGD+ A+++ M + G+ PD + Y+ L +G +N G +++A I E + ++ +
Sbjct: 743 YCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAII 802
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
S +++TL+ G+CK + +K L+ M D + P++
Sbjct: 803 S--SFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSL 837
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 157/364 (43%), Gaps = 40/364 (10%)
Query: 183 IVKEIGEKEKGV-LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEA 241
+V+E+ +E G L V N LI + G + AF + DYG V + TY I
Sbjct: 265 VVEEM--RETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIING 322
Query: 242 LSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPP 301
L +R D A + ++M G +P+ +I F + G A EA + + P
Sbjct: 323 LCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPN 382
Query: 302 QSVVAFLISSLCQED----------ETVKLALDMLDDFS--------------------- 330
+ LI LC+ + K+ M D +
Sbjct: 383 KITYDNLIRGLCKLGRMGRASRILKQMTKIGY-MADTMTYNLVIEGHLRQHNKEEAFLLL 441
Query: 331 GEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
E RK I P +S +I LC++ + A LL +MI++G P V+ +IS Y +
Sbjct: 442 NEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCRE 501
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
G + A E LK M L PD+Y Y L+ G +N G+M+EA E +E + + + TY
Sbjct: 502 GSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTY 561
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
LI GY + A +LL++M + G+ PN Y ++++ K+ + L+ M
Sbjct: 562 GGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGY-FKSDNLEKVSSTLKSML 620
Query: 507 LKGL 510
KGL
Sbjct: 621 EKGL 624
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 162/372 (43%), Gaps = 40/372 (10%)
Query: 181 WDIVKEIGEKEKGVLTVEI-LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI 239
+ IVKE+ GV +I + LI KLG+ A + + G +A+ TY I
Sbjct: 368 FKIVKEM--SAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVI 425
Query: 240 EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
E R+ + A+ + +M + G P+ II+ C+ G+++ A + +
Sbjct: 426 EGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLK 485
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P V A LIS C+E + LA + L + E + ++S+I L + + A
Sbjct: 486 PNAFVYAPLISGYCREG-SFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIE 544
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY- 418
+M+ +G P + + +I YS AG++ A ++L M + GL P+ + Y ++ GY
Sbjct: 545 YYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYF 604
Query: 419 ----------------------------------ANGGQMEEACEILNEAKKNHSRLSPV 444
++ G M+ A +L+ +KN +
Sbjct: 605 KSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSL 664
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLED 504
Y +LI G+CK + + A+ LL+EM G++P + YN LI C K+ D A +
Sbjct: 665 IYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFC-KSDDISHARNIFNS 723
Query: 505 MRLKGLHLNGIT 516
+ KGL N +T
Sbjct: 724 IICKGLPPNCVT 735
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 131/289 (45%), Gaps = 7/289 (2%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + K+ ++A +V + + GC N TY I L R + A+ ++M + G
Sbjct: 249 LIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYG 308
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETV 319
+PD G II+ CK G+ +A + + P V + LI ++ DE
Sbjct: 309 LVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAF 368
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
K+ +M S + + ++IR LC++ + A +L +M G +N V
Sbjct: 369 KIVKEM----SAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLV 424
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I + + + A +L MR G+ P+VYTY+ +++G G+ E A +L + +
Sbjct: 425 IEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGL 484
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ + Y LI GYC+ F A + L +M + P++ YN LI L
Sbjct: 485 KPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGL 533
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 137/324 (42%), Gaps = 10/324 (3%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+L+ L+ + K G+ + EV D G + ++ L R D W V M
Sbjct: 175 VLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFM 234
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
G PD +I +CK + A V RE LI LC+
Sbjct: 235 EGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAG-- 292
Query: 319 VKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
A++ + E Y + P + ++I LC+ AK LL +M G P
Sbjct: 293 ---AIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVV 349
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
V++++I + + G+ A +++K M + G++P+ TY L+ G G+M A IL +
Sbjct: 350 VYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQM 409
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
K +TY+ +I G+ + + A LLNEM+ G+ PNV Y+ +I LC
Sbjct: 410 TKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGES 469
Query: 495 WRTAEKLLEDMRLKGLHLNGITRA 518
R A LLE M GL N A
Sbjct: 470 ER-ASGLLEQMIADGLKPNAFVYA 492
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 147/342 (42%), Gaps = 37/342 (10%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
AF + N+ G N TY I L + + A + E+MI G P++ +IS
Sbjct: 437 AFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLIS 496
Query: 276 WFCKGGKAKEA-HVVYTLAREK---KMYPPQSVVAFLISSLCQEDETVKLALDML----- 326
+C+ G A + + RE +Y S++ L S++ + DE ++ +ML
Sbjct: 497 GYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGL-SNVGKMDEAIEYYDEMLEKGFQ 555
Query: 327 -DDFS--GEARKYA-------------------IKP----FSSVIRSLCRMKDVHGAKTL 360
+DF+ G Y+ + P ++ ++ + ++ +
Sbjct: 556 PNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSST 615
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
L M+ +G P N ++ VI S +G M A+ +L ++ GL PD Y L+SG+
Sbjct: 616 LKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCK 675
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
ME+A +L+E K Y+ LI G+CK ++ A + N + G+ PN
Sbjct: 676 AADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVT 735
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRA 522
Y LI C KA D R A L +M +G+ + +++ A
Sbjct: 736 YTTLIDGYC-KAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAA 776
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 92/180 (51%), Gaps = 1/180 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+S++I + C+++D+ AK ++ +M G +N++I +AG + A K M
Sbjct: 246 YSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEME 305
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
GL PD +TY +++G G+ ++A +L+E + V Y TLI G+ + D
Sbjct: 306 DYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNAD 365
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
A K++ EM GVQPN Y+ LI+ LC K A ++L+ M G + +T L+
Sbjct: 366 EAFKIVKEMSAAGVQPNKITYDNLIRGLC-KLGRMGRASRILKQMTKIGYMADTMTYNLV 424
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 1/180 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++++I LCR + A +M G P + ++I+ K G A +L M
Sbjct: 281 YNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMS 340
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
GL P+V Y+ L+ G+ G +EA +I+ E + + +TY LIRG CKL
Sbjct: 341 CAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMG 400
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
A ++L +M +G + YN +I+ L+ + A LL +MR G+ N T ++I
Sbjct: 401 RASRILKQMTKIGYMADTMTYNLVIEGH-LRQHNKEEAFLLLNEMRKGGISPNVYTYSII 459
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 53/270 (19%), Positives = 102/270 (37%), Gaps = 24/270 (8%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
I LI+ F K + A + ++ G Y I+ + A ++ +
Sbjct: 665 IYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSI 724
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
I G P+ +I +CK G ++A +Y + + P V + L + C
Sbjct: 725 ICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAG-CSNSGD 783
Query: 319 VKLALDMLDDFSGEARKYAI-KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
++ AL + ++ AR YAI F++++ C+ + L M+ + P
Sbjct: 784 LQQALFITEEMI--ARGYAIISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVE 841
Query: 378 SVISAYSKAGDMTPAMEM-LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
+++ +AG ++ A + ++L + D + L + N G
Sbjct: 842 NIVIGLGEAGKLSEAHTIFVELQQKNASHRDTDHLSSLFTDMINQG-------------- 887
Query: 437 NHSRLSPV-TYHTLIRGYCKLEEFDCALKL 465
L P+ H +I+ +CK D AL L
Sbjct: 888 ----LVPLDVIHNMIQSHCKQGYLDKALML 913
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 135/308 (43%), Gaps = 3/308 (0%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
AF +FN+ G A+ Y I +D + MI+ PD +I
Sbjct: 266 AFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALID 325
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
F K GK +EA ++ ++ + P LI C+E++ K A MLD +
Sbjct: 326 CFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDK-ANHMLDLMVSKGCG 384
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
I+ F+ +I C+ + L KM G +N++I + + G + A E+
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
+ M SR ++PD+ +Y L+ G + G+ E+A EI + +K+ L Y+ +I G C
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 504
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
+ D A L + GV+P+V YN +I LC K A+ L M G NG
Sbjct: 505 ASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKG-SLSEADLLFRKMEEDGHSPNGC 563
Query: 516 T-RALIRA 522
T LIRA
Sbjct: 564 TYNILIRA 571
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 146/348 (41%), Gaps = 23/348 (6%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
L+ +C E L D + E+G K T+ LN L+ GK A + ++
Sbjct: 147 TLINGLCLEGRVSEALELVDRMVEMGHKP----TLITLNALVNGLCLNGKVSDAVLLIDR 202
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ G N+ TY ++ + + A + KM E D+ K II CK G
Sbjct: 203 MVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGS 262
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIK 339
A ++ K + LI C D+ KL DM+ K I
Sbjct: 263 LDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI--------KRKIT 314
Query: 340 P----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
P FS++I + + A+ L +MI G P + S+I + K + A M
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM 374
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
L LM S+G P++ T+ L++GY +++ E+ + VTY+TLI+G+C+
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 434
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
L + + A +L EM V+P++ Y L+ LC D EK LE
Sbjct: 435 LGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC----DNGEPEKALE 478
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 158/360 (43%), Gaps = 7/360 (1%)
Query: 170 SSVGKKEVYAL-WDIVKEIGEKEKGVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYG 227
S V + + Y L D+ K++ + KG+ + L+ +I + K AF K G
Sbjct: 80 SVVARTKQYDLVLDLCKQM--ELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLG 137
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH 287
+ T+ I L A + ++M+E G P + +++ C GK +A
Sbjct: 138 YEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAV 197
Query: 288 VVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRS 347
++ E P + ++ +C+ +T LA+++L K +S +I
Sbjct: 198 LLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA-LAMELLRKMEERKIKLDAVKYSIIIDG 256
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
LC+ + A L ++M +G ++ ++I + AG ++L+ M R + PD
Sbjct: 257 LCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPD 316
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
V ++ L+ + G++ EA E+ E + VTY +LI G+CK + D A +L+
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLD 376
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAVKEL 526
M G PN+ +N LI C KA +L M L+G+ + +T LI+ EL
Sbjct: 377 LMVSKGCGPNIRTFNILINGYC-KANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 435
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 126/321 (39%), Gaps = 25/321 (7%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+ N LI + K E+F K G VA+ TY I+ + A + +
Sbjct: 387 IRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M+ PD ++ C G+ ++A ++ + KM + +I +C
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 506
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ V A D+ + K +K ++ +I LC+ + A L KM +G P +
Sbjct: 507 K-VDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTY 565
Query: 377 NSVISAYSKAGDMTP----------------------AMEMLKLMRSRGLKPDVYTYTGL 414
N +I A+ GD T A+ L M G +PDV+T+T L
Sbjct: 566 NILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTL 625
Query: 415 MSGYA--NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
+ + + +A + K + + VTY+T+I+G +L++M +
Sbjct: 626 LRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFER 685
Query: 473 GVQPNVDEYNKLIQSLCLKAL 493
G QPN + I LC + L
Sbjct: 686 GCQPNAVTKSTFISGLCKQDL 706
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 106/263 (40%), Gaps = 16/263 (6%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ + A E+F K + Y I + D AW + + G PD +
Sbjct: 471 GEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTY 530
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
+I CK G EA +++ E P LI + E + K A
Sbjct: 531 NIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSA-----KLI 585
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS--KAGD 388
E ++ +S +R A + L++M+ G P F +++ + +
Sbjct: 586 EEIKRCGFSVDASTLRF---------ALSTLARMLKAGHEPDVFTFTTLLRPFCLEENAS 636
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHT 448
+ A + K M++ G KP+V TY ++ G NG + + +L++ + + + VT T
Sbjct: 637 VYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKST 696
Query: 449 LIRGYCKLEEFDCALKLLNEMKD 471
I G CK + A+ LL +M++
Sbjct: 697 FISGLCKQDLHGSAILLLRKMEN 719
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/337 (20%), Positives = 132/337 (39%), Gaps = 24/337 (7%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F K GK + A E+ + G + TY I+ + D A + + M+ G
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P+ +I+ +CK + ++ + + LI C+ + +++A
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK-LEVA 441
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++ + + I + ++ LC + A + K+ ++N +I
Sbjct: 442 KELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHG 501
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
A + A ++ + +G+KPDV TY ++ G G + EA + + +++ +
Sbjct: 502 MCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPN 561
Query: 443 PVTYHTLIRGYCK----------LEEFD-C-----------ALKLLNEMKDVGVQPNVDE 480
TY+ LIR + +EE C AL L M G +P+V
Sbjct: 562 GCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFT 621
Query: 481 YNKLIQSLCL-KALDWRTAEKLLEDMRLKGLHLNGIT 516
+ L++ CL + A L ++M+ G N +T
Sbjct: 622 FTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVT 658
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 92/199 (46%), Gaps = 1/199 (0%)
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A+D+ + + + + FS + + R K L +M +G + +I+
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
+ ++ A + + G +PD T++ L++G G++ EA E+++ + +
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+ +T + L+ G C + A+ L++ M + G QPN Y +++ +C K+ A +L
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMC-KSGQTALAMEL 234
Query: 502 LEDMRLKGLHLNGITRALI 520
L M + + L+ + ++I
Sbjct: 235 LRKMEERKIKLDAVKYSII 253
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 149/331 (45%), Gaps = 10/331 (3%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
++L+ ++C KE ++ + G K +++ IL + ++ G+ +F+
Sbjct: 381 NSLMDSLCKHKRSKEAAEIFHSIATKGHKPD-IISYSIL---LHGYATEGRFVDMNNLFH 436
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
D G VA+ + I A ++R + D A + +M G P+ +I+ C+ G
Sbjct: 437 SMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMG 496
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK---LALDMLDDFSGEARKYAI 338
+ +A + + P V LI C + +K L +M+D G R I
Sbjct: 497 RLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQ--GIPRP-NI 553
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
FSS+I SLC V A+ + + +I G P FNS+I Y G M A +L
Sbjct: 554 TFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDA 613
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M S G +PDV TY+ L++GY G++++ + E + + VTY ++ G +
Sbjct: 614 MVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGR 673
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A K+ +EM + G ++ Y ++Q LC
Sbjct: 674 TSAAKKMFHEMIESGTAMSISTYTIILQGLC 704
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 131/280 (46%), Gaps = 2/280 (0%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ A +FN+ G V N TY + AL + + D A V +M + PD
Sbjct: 286 GEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTY 345
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
+I + G+ KEA ++ + + P L+ SLC+ + K A ++ +
Sbjct: 346 TAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRS-KEAAEIFHSIA 404
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
+ K I +S ++ L M G + FN +I+A++K G M
Sbjct: 405 TKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMD 464
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A+ + MR +G+ P+V TY +++ G++ +A E L++ + + V YH+LI
Sbjct: 465 EALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLI 524
Query: 451 RGYCKLEEFDCALKLLNEMKDVGV-QPNVDEYNKLIQSLC 489
+G+C + A +L++EM D G+ +PN+ ++ +I SLC
Sbjct: 525 QGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLC 564
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 161/393 (40%), Gaps = 47/393 (11%)
Query: 191 EKGVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
+KGV+ V N ++ K A V + D ++ TY I S +
Sbjct: 300 QKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWK 359
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A + ++M G +PD ++ CK ++KEA ++ K P + L+
Sbjct: 360 EAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILL 419
Query: 310 SSLCQEDETVKL----------------------------------ALDMLDDFSGEARK 335
E V + AL + + G+
Sbjct: 420 HGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVS 479
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+ +++VI +LCRM + A LS+MIS G P V++S+I + GD+ A E+
Sbjct: 480 PNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKEL 539
Query: 396 LKLMRSRGL-KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+ M +G+ +P++ ++ ++ N G++ A ++ N R T+++LI GYC
Sbjct: 540 VSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYC 599
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLK------ 508
+ + D A +L+ M G +P+V Y+ LI K+ L +M K
Sbjct: 600 LVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGY-FKSGRIDDGLILFREMLCKRVKPTT 658
Query: 509 ---GLHLNGITRA-LIRAVKELEEDAIENGEAL 537
L L+G+ RA A K++ + IE+G A+
Sbjct: 659 VTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAM 691
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 130/296 (43%), Gaps = 9/296 (3%)
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
GD GC + +Y I L A ++ +M++ G +P+ I+ CK
Sbjct: 265 GD-GCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAM 323
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLI---SSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
+A +V + + P + +I S L + E K M + + E I
Sbjct: 324 DKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAK----MFKEMTREGLIPDIVT 379
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F+S++ SLC+ K A + + ++G P ++ ++ Y+ G + M
Sbjct: 380 FNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMT 439
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G+ D + + L++ +A G M+EA I E + + VTY T+I C++
Sbjct: 440 DNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLA 499
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A++ L++M +G++PN Y+ LIQ C D A++L+ +M +G+ IT
Sbjct: 500 DAMEKLSQMISIGLKPNTVVYHSLIQGFCTHG-DLIKAKELVSEMMDQGIPRPNIT 554
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 113/256 (44%), Gaps = 3/256 (1%)
Query: 233 ETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA-HVVYT 291
TY ++ R + D + +++ G D + C + EA ++
Sbjct: 166 HTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLH 225
Query: 292 LAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS-GEARKYAIKPFSSVIRSLCR 350
E P +I SLC + + ALDML + G+ + ++ VI L
Sbjct: 226 RMSELGCVPDAFSYNTVIKSLCGGSRSQE-ALDMLLRMTKGDGCSPDVVSYTMVIHGLFM 284
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
++ A L ++M+ +G P +NS++ A KA M A +L+ M ++PD T
Sbjct: 285 EGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVT 344
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
YT ++ GY+ G+ +EA ++ E + VT+++L+ CK + A ++ + +
Sbjct: 345 YTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIA 404
Query: 471 DVGVQPNVDEYNKLIQ 486
G +P++ Y+ L+
Sbjct: 405 TKGHKPDIISYSILLH 420
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 2/170 (1%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMI-SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
+++VI+SLC A +L +M +G P + VI G+++ A + M
Sbjct: 239 YNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEM 298
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
+G+ P+V TY ++ M++A +L + N + VTY +I GY L +
Sbjct: 299 VQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRW 358
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
A K+ EM G+ P++ +N L+ SLC K + A ++ + KG
Sbjct: 359 KEAAKMFKEMTREGLIPDIVTFNSLMDSLC-KHKRSKEAAEIFHSIATKG 407
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 110/268 (41%), Gaps = 4/268 (1%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
V +L++ C+ ++ ++V E+ ++ + + +I G+ A +V
Sbjct: 519 VYHSLIQGFCT---HGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDV 575
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
FN G + T+ I+ D A+ V + M+ G+ PD +I+ + K
Sbjct: 576 FNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFK 635
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
G+ + +++ K++ P + ++ L + T A M + +I
Sbjct: 636 SGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRT-SAAKKMFHEMIESGTAMSIS 694
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
++ +++ LCR A TL K+ + A+ N++I A K A ++ +
Sbjct: 695 TYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASV 754
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEA 427
+ GL P+ TY ++ G +EEA
Sbjct: 755 SASGLVPNASTYGVMIINLLKEGSVEEA 782
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 146/328 (44%), Gaps = 2/328 (0%)
Query: 194 VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWS 253
V+T L + ++GK A + + G N+ TY I+ + + A
Sbjct: 190 VITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMR 249
Query: 254 VCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC 313
V +M G P+ +I+ C GK EA + + P LI+ C
Sbjct: 250 VFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFC 309
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
+ ++TV A+++ +D + ++++I + C+ + A L + MI G P
Sbjct: 310 K-NKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEV 368
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+ +N +I+ + GD+ A ++ M S+ L DV TY L+ G+ +A ++L+E
Sbjct: 369 STYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDE 428
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
+ S VTY+TL+ GYC+ AL + M+ G Q NV +N LI+ CLK
Sbjct: 429 MFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKG- 487
Query: 494 DWRTAEKLLEDMRLKGLHLNGITRALIR 521
A LL +M +GL N T +I+
Sbjct: 488 RLEDANGLLNEMLERGLVPNRTTYEIIK 515
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 146/334 (43%), Gaps = 5/334 (1%)
Query: 190 KEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEA---LSRRK 246
K K L V N ++ K+GK A +V +G N TY I+ + R
Sbjct: 148 KRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIG 207
Query: 247 IFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVA 306
A ++ ++M+ G P+ +I FCK A V+ + + + P
Sbjct: 208 KMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYN 267
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
LI+ LC D V A+ + D + + + +I C+ K V+ A L + M
Sbjct: 268 ILINGLCS-DGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEK 326
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
+G P + ++I AY K G M A + +M RG+ P+V TY L++G G ++
Sbjct: 327 QGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKA 386
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A ++NE VTY+ LI CK E A+KLL+EM + G+ P+ YN L+
Sbjct: 387 ARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMD 446
Query: 487 SLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
C + + R A + M KG N +T ++
Sbjct: 447 GYCREG-NLRAALIVRTRMERKGKQANVVTHNVL 479
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 149/357 (41%), Gaps = 41/357 (11%)
Query: 199 ILNELIAL-FSKLGKGKAAFEVFNKFGDY--------------GCVANQET--YYFTIEA 241
IL +++ L F + K FE F + GDY G V E F
Sbjct: 86 ILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYRE 145
Query: 242 LSRRKI-------------------FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ +RKI + A V E M G P+ +I +CK G+
Sbjct: 146 MIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGR 205
Query: 283 AKEAHVVYTLARE---KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
+ + + +E K + P + LI C+ DE V A+ + + + + +
Sbjct: 206 IGKMYKADAILKEMVAKGICPNEVTYNILIDGFCK-DENVSGAMRVFGEMQRQGLRPNVV 264
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
++ +I LC V A L +M+S P N +I+ + K + A+ + M
Sbjct: 265 TYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDM 324
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
+G+ P+ TYT L+ Y G+ME+A + N TY+ LI G C+ +
Sbjct: 325 EKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDV 384
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A L+NEM + +V YN LI SLC K + R A KLL++M KGL+ + +T
Sbjct: 385 KAARSLMNEMVSKKLSADVVTYNILIDSLCKKG-ESRKAVKLLDEMFEKGLNPSHVT 440
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 85/197 (43%), Gaps = 19/197 (9%)
Query: 326 LDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSK 385
LD F + Y++ S++ ++ D ++L+ M+ + A+ +
Sbjct: 55 LDKFVKYEKDYSV---SAIFHAISMSGDSFCVNSILADML--------------VLAFVR 97
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
+ E K G K + + L+SG + + + E K L+ ++
Sbjct: 98 NLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVIS 157
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT--AEKLLE 503
++ ++ G CK+ + + A ++ +MK GV PNV YN LI C + A+ +L+
Sbjct: 158 FNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILK 217
Query: 504 DMRLKGLHLNGITRALI 520
+M KG+ N +T ++
Sbjct: 218 EMVAKGICPNEVTYNIL 234
>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 159/355 (44%), Gaps = 7/355 (1%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
++ L+K +C E +L + G + V I+N L K+GK + A ++
Sbjct: 142 ILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGL----CKIGKTRDAIQM 197
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
F K N Y I+ L ++ + D A +C +M+E G D +I FC
Sbjct: 198 FPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCS 257
Query: 280 GGKAKEA-HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
G+ + A ++ + K+YP LI LC+ V A +++ K I
Sbjct: 258 VGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGR-VSEAYNVVAVMIKRGWKPDI 316
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
+++++ C V AK + KM+ P + ++I+ Y K + AM +L
Sbjct: 317 VSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTE 376
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M ++ L PD TY L+ G + G+ +++ + + +TY+ L+ Y K E+
Sbjct: 377 MHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEK 436
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
FD AL L + ++G+ PN+ YN L+ LC K+ + A+++ + + KG N
Sbjct: 437 FDKALALFQHIIEIGISPNIRTYNILLDGLC-KSGRLKYAKEIFQLLSAKGCQPN 490
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 108/221 (48%), Gaps = 5/221 (2%)
Query: 272 KIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDF 329
K++S K + +YT+ + K P S++ F LI++ Q + + A +L +
Sbjct: 74 KLLSTLIKLKRYNAVVSLYTILQSKPTIKP-SLITFSILINAFAQLGQ-MGFAFSLLGNI 131
Query: 330 SGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
+ ++ +++++ LC V A +LL + + G + ++I+ K G
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKT 191
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
A++M M+ + P++ Y ++ G G ++EAC + E +N L +Y+++
Sbjct: 192 RDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSM 251
Query: 450 IRGYCKLEEFDCALKLLNEMKDVG-VQPNVDEYNKLIQSLC 489
I G+C + F A+KLL+EM G V P+V +N LI LC
Sbjct: 252 IHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLC 292
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 1/154 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGP-PPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
F+ ++ +L ++K + +L + + S+ P F+ +I+A+++ G M A +L +
Sbjct: 72 FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
G + DV T LM G G++ EA +L+E R V Y T+I G CK+ +
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKT 191
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
A+++ +MK + V PN+ YN +I LC + L
Sbjct: 192 RDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGL 225
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 136/290 (46%), Gaps = 2/290 (0%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G N T+ I L A ++ ++M+ G PD G +++ CK G A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
++ + K+ P + +I LC+ ++ + AL++ + + + + +SS+I
Sbjct: 241 FILLNKMEQGKLEPGVLIYTTIIDGLCK-NKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
LC A LLS MI P F+++I A+ K G + A ++ M R + P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
+ TY+ L++G+ +++EA ++ H V+Y TLI+G+CK + D ++L
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELF 419
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
EM G+ N Y LIQ L +A D A+++ ++M G+ N +T
Sbjct: 420 REMSQRGLVGNTVTYTTLIQGL-FQAGDCDMAQEIFKEMVSDGVPPNIMT 468
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 174/415 (41%), Gaps = 14/415 (3%)
Query: 112 QSSVDGYLESSLDSFELDLHEDFVLKVLETPLVLGENLV---CFFKWVTSGVVDALLKAI 168
Q V GY +++ +F +H F+ + L + +V C VT GVV + +
Sbjct: 176 QMFVTGYQPNTV-TFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVV---VNGL 231
Query: 169 CSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGC 228
C + L + +++ G+ E GVL I +I K A +F + G
Sbjct: 232 CKRGDTDLAFILLNKMEQ-GKLEPGVL---IYTTIIDGLCKNKHMDDALNLFKEMETKGI 287
Query: 229 VANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHV 288
N TY I L + A + MIE PD +I F K GK EA
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 347
Query: 289 VYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSL 348
+Y ++ + P + LI+ C D + A M + + + +S++I+
Sbjct: 348 LYDEMVKRSIDPSIVTYSSLINGFCMHDR-LDEAKQMFEFMVSKHCFPDVVSYSTLIKGF 406
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
C+ K V L +M G + ++I +AGD A E+ K M S G+ P++
Sbjct: 407 CKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 466
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNE 468
TY L+ G G++E+A + +++ + TY+ +I G CK + + L
Sbjct: 467 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN 526
Query: 469 MKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN-GITRALIRA 522
+ GV+P+V YN +I C K A+ L ++M+ G N G LIRA
Sbjct: 527 LSLKGVKPDVVAYNTMISGFCRKG-SKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 155/374 (41%), Gaps = 39/374 (10%)
Query: 180 LWDIVKEIGE--KEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYF 237
L D V GE K + ++ ++L++ +K+ K + + + G N TY
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSI 121
Query: 238 TIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG----------------- 280
I RR A +V KM++ G P+ + +++ +C
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 281 ------------------GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
KA EA + K P +++ LC+ +T LA
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT-DLA 240
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+L+ + + ++++I LC+ K + A L +M ++G P ++S+IS
Sbjct: 241 FILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
G + A +L M R + PDV+T++ L+ + G++ EA ++ +E K S
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
VTY +LI G+C + D A ++ M P+V Y+ LI+ C KA +L
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFC-KAKRVDEGMELF 419
Query: 503 EDMRLKGLHLNGIT 516
+M +GL N +T
Sbjct: 420 REMSQRGLVGNTVT 433
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 141/302 (46%), Gaps = 14/302 (4%)
Query: 233 ETYYFTIEALSRRKI----FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHV 288
+T Y E LSR + D A ++ +M+++ P + K++S K K V
Sbjct: 43 KTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFD---V 99
Query: 289 VYTLAREKK---MYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVI 345
V +L + + M + LI+ C+ + + LAL +L + I SS++
Sbjct: 100 VISLGEQMQNLGMPHNHYTYSILINCFCRRSQ-LPLALAVLGKMMKLGYEPNIVTLSSLL 158
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
C K + A L+ +M G P FN++I + A+ ++ M ++G +
Sbjct: 159 NGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQ 218
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
PD+ TY +++G G + A +LN+ ++ + Y T+I G CK + D AL L
Sbjct: 219 PDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNL 278
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRA-V 523
EM+ G++PNV Y+ LI LC W A +LL DM + ++ + T ALI A V
Sbjct: 279 FKEMETKGIRPNVVTYSSLISCLCNYG-RWSDASRLLSDMIERKINPDVFTFSALIDAFV 337
Query: 524 KE 525
KE
Sbjct: 338 KE 339
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 105/225 (46%), Gaps = 2/225 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F K + E+F + G V N TY I+ L + D A + ++M+ G
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDG 461
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P+ ++ CK GK ++A VV+ + KM P +I +C+ + V+
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK-VEDG 520
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
D+ + S + K + ++++I CR A L +M +G P + +N++I A
Sbjct: 521 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
+ GD + E++K MRS G D T GL++ + G+++++
Sbjct: 581 RLRDGDREASAELIKEMRSCGFAGDAST-IGLVTNMLHDGRLDKS 624
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 154/348 (44%), Gaps = 19/348 (5%)
Query: 190 KEKGVLTVEILNELIALFSKLGKGKAAF-----------------EVFNKFGDYGCVANQ 232
+ GV +EI+N L + FS G + F E F G +
Sbjct: 141 RRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSI 200
Query: 233 ETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTL 292
+ I +L R + AW V +++ +G + + +++ CK GK ++ +
Sbjct: 201 DACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQ 260
Query: 293 AREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMK 352
+EK +YP LIS+ + ++ A ++++ G+ + +++VI LC+
Sbjct: 261 VQEKGVYPDIVTYNTLISAYSSKG-LMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHG 319
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT 412
AK + ++M+ G P + + S++ K GD+ ++ MRSR + PD+ ++
Sbjct: 320 KYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFS 379
Query: 413 GLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
+MS + G +++A N K+ V Y LI+GYC+ A+ L NEM
Sbjct: 380 SMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQ 439
Query: 473 GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
G +V YN ++ LC + + A+KL +M + L + T ++
Sbjct: 440 GCAMDVVTYNTILHGLCKRKM-LGEADKLFNEMTERALFPDSYTLTIL 486
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 139/308 (45%), Gaps = 10/308 (3%)
Query: 190 KEKGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
+EKGV + N LI+ +S G + AFE+ N G TY I L + +
Sbjct: 262 QEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKY 321
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
+ A V +M+ +G PDS ++ CK G E V++ R + + P + +
Sbjct: 322 ERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSM 381
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKM 364
+S + LD + ++ + P ++ +I+ CR + A L ++M
Sbjct: 382 MSLFTRSGN-----LDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEM 436
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
+ +G +N+++ K + A ++ M R L PD YT T L+ G+ G +
Sbjct: 437 LQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNL 496
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
+ A E+ + K+ RL VTY+TL+ G+ K+ + D A ++ +M + P Y+ L
Sbjct: 497 QNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSIL 556
Query: 485 IQSLCLKA 492
+ +LC K
Sbjct: 557 VNALCSKG 564
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 137/326 (42%), Gaps = 39/326 (11%)
Query: 190 KEKGVLTVEILNE-LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
KE G++ ++ LI + + G A + N+ GC + TY + L +RK+
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM---------- 298
A + +M E PDS + +I CK G + A ++ +EK++
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTL 521
Query: 299 -------------------------YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEA 333
P + L+++LC + + A + D+ +
Sbjct: 522 LDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAE-AFRVWDEMISKN 580
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
K + +S+I+ CR + ++ L KMISEG P +N++I + + +M+ A
Sbjct: 581 IKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAF 640
Query: 394 EMLKLMRSR--GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
++K M GL PDV+TY ++ G+ QM+EA +L + + TY +I
Sbjct: 641 GLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMIN 700
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPN 477
G+ + A ++ +EM G P+
Sbjct: 701 GFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 136/325 (41%), Gaps = 36/325 (11%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
+ +++LF++ G A FN + G + + Y I+ R+ + A ++ +M+
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML 437
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC------ 313
+ G D I+ CK EA ++ E+ ++P + LI C
Sbjct: 438 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQ 497
Query: 314 ------QEDETVKLALD------MLDDFS------------GEARKYAIKP----FSSVI 345
Q+ + ++ LD +LD F + I P +S ++
Sbjct: 498 NAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILV 557
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
+LC + A + +MIS+ P + NS+I Y ++G+ + L+ M S G
Sbjct: 558 NALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV 617
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCAL 463
PD +Y L+ G+ M +A ++ + ++ L P TY++++ G+C+ + A
Sbjct: 618 PDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAE 677
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSL 488
+L +M + GV P+ Y +I
Sbjct: 678 VVLRKMIERGVNPDRSTYTCMINGF 702
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 65/158 (41%), Gaps = 10/158 (6%)
Query: 164 LLKAICSSVGKKEVYALWD--IVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
L+ A+CS E + +WD I K I TV I N +I + + G
Sbjct: 556 LVNALCSKGHLAEAFRVWDEMISKNIKP------TVMICNSMIKGYCRSGNASDGESFLE 609
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE--TGSLPDSEKVGKIISWFCK 279
K G V + +Y I R + A+ + +KM E G +PD I+ FC+
Sbjct: 610 KMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCR 669
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
+ KEA VV E+ + P +S +I+ +D
Sbjct: 670 QNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDN 707
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 105/274 (38%), Gaps = 58/274 (21%)
Query: 301 PQSVVAFLISSLCQEDETV-KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P +VV L C+ D T+ + +D L F K+ S++I L R + A++
Sbjct: 78 PLAVVEVLYR--CRNDLTLGQRFVDQLG-FHFPNFKHTSLSLSAMIHILVRSGRLSDAQS 134
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGD-----------------MTPAMEMLKLMRSR 402
L +MI + NS+ S +S G + A E L+RS+
Sbjct: 135 CLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSK 194
Query: 403 GLKP-----------------------------------DVYTYTGLMSGYANGGQMEEA 427
G +VYT +++ G+ME+
Sbjct: 195 GFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKV 254
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
L++ ++ VTY+TLI Y + A +L+N M G P V YN +I
Sbjct: 255 GTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVING 314
Query: 488 LCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALI 520
LC K + A+++ +M GL + T R+L+
Sbjct: 315 LC-KHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 142/308 (46%), Gaps = 22/308 (7%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSV-- 254
+ N +I+ ++G+ + A +V +G + TY I+ ++ + V
Sbjct: 191 IYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDM 250
Query: 255 -CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISS 311
++M+E G P + G +I+ +CK A V+ +++ + SVV + LIS
Sbjct: 251 LLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGI--AASVVTYNSLISG 308
Query: 312 LCQE---DETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKM 364
LC E +E VKL +M D + P F V++ C+ + A + M
Sbjct: 309 LCSEGKVEEGVKLMEEMED--------LGLSPNEITFGCVLKGFCKKGMMADANDWIDGM 360
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
P ++ +I Y + G M AM + + M +G+ P+V TY L++G++ G
Sbjct: 361 TERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDW 420
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
A +L+E K+ VTY+ LI C E A+KLL+EM +VG++PN YN +
Sbjct: 421 RSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTI 480
Query: 485 IQSLCLKA 492
IQ C K
Sbjct: 481 IQGFCDKG 488
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 145/328 (44%), Gaps = 4/328 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGV-LTVEILNELIALFSKLGKGKAAFEVF 220
++L+ C G +Y + ++KE+ E G+ T LI + K AA VF
Sbjct: 230 NSLIDGYCKKGGAGNMYHVDMLLKEM--VEAGISPTAVTFGVLINGYCKNSNTAAAVRVF 287
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ G A+ TY I L + + E+M + G P+ G ++ FCK
Sbjct: 288 EEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKK 347
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
G +A+ E+ + P + LI + ++ A+ + + + + +
Sbjct: 348 GMMADANDWIDGMTERNVEPDVVIYTILIDGY-RRLGKMEDAMAVKEAMAKKGISPNVTT 406
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++ +I R D A LL +M +G +N +I A G++ A+++L M
Sbjct: 407 YNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMS 466
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
GL+P+ TY ++ G+ + G ++ A EI +K R + VTY+ I+ +C++ + D
Sbjct: 467 EVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMD 526
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSL 488
A LLNEM D + PN Y + + +
Sbjct: 527 EANDLLNEMLDKCLVPNGITYETIKEGM 554
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 118/257 (45%), Gaps = 9/257 (3%)
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL-AL 323
PD +IS C+ G+ ++A V + + P + LI C++ + +
Sbjct: 189 PDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHV 248
Query: 324 DMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
DML EA I P F +I C+ + A + +M +G +NS+
Sbjct: 249 DMLLKEMVEA---GISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSL 305
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
IS G + +++++ M GL P+ T+ ++ G+ G M +A + ++ + +
Sbjct: 306 ISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNV 365
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
V Y LI GY +L + + A+ + M G+ PNV YN LI ++ DWR+A
Sbjct: 366 EPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFS-RSGDWRSAS 424
Query: 500 KLLEDMRLKGLHLNGIT 516
LL++M+ KG+ + +T
Sbjct: 425 GLLDEMKEKGIEADVVT 441
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 13/176 (7%)
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P + N++++ A + A + + R + PD+YT+ ++SG GQ+ +A ++
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCK------LEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
+ K S TY++LI GYCK + D LL EM + G+ P + L
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVD---MLLKEMVEAGISPTAVTFGVL 270
Query: 485 IQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAVKELEEDAIENGEALVE 539
I C K + A ++ E+M+ +G+ + +T +LI + E +E G L+E
Sbjct: 271 INGYC-KNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGL--CSEGKVEEGVKLME 323
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCA 462
+P + L++G +++ A + A + R+SP T++T+I G C++ + A
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRR--RVSPDIYTFNTVISGLCRIGQLRKA 210
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLK--ALDWRTAEKLLEDMRLKGLHLNGIT 516
+ ++K G+ P+V YN LI C K A + + LL++M G+ +T
Sbjct: 211 GDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVT 266
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 146/321 (45%), Gaps = 2/321 (0%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
++ LN L+ F + A + ++ + G + T+ + L + A ++
Sbjct: 134 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 193
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
E+M+ G PD G +I+ CK G+ A + + K+ + + +I SLC+
Sbjct: 194 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKY 253
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
V AL++ + + + + +SS+I LC A LLS M+ P
Sbjct: 254 -RHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVT 312
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
FNS+I A++K G + A ++ M R + P++ TY L++G+ +++EA +I
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV 372
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
VTY+TLI G+CK ++ ++L +M G+ N Y LI +A D
Sbjct: 373 SKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF-FQASDC 431
Query: 496 RTAEKLLEDMRLKGLHLNGIT 516
A+ + + M G+H N +T
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMT 452
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 153/353 (43%), Gaps = 40/353 (11%)
Query: 202 ELIALFSKLGKGKAAFEVFNKFGD----YGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
E L S + K K F++ FG+ G N TY I L RR +A ++ K
Sbjct: 67 EFSKLLSAIAKMKK-FDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGK 125
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEA--------------------HVVYTLAREKK 297
M++ G P + +++ FC G + EA +V+ L + K
Sbjct: 126 MMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNK 185
Query: 298 MYPPQSVVAFLISSLCQEDETV--------------KLALDMLDDFSGEARKYAIKPFSS 343
++V ++ CQ D LAL++L+ + + +S+
Sbjct: 186 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYST 245
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
VI SLC+ + V A L ++M ++G P ++S+IS G + A +L M R
Sbjct: 246 VIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK 305
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
+ P+V T+ L+ +A G++ EA ++ +E + + VTY++LI G+C + D A
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQ 365
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++ M P+V YN LI C KA +L DM +GL N +T
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFC-KAKKVVDGMELFRDMSRRGLVGNTVT 417
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 147/337 (43%), Gaps = 21/337 (6%)
Query: 161 VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVF 220
+++LL C E AL D + E+G + V +++ L + K A +
Sbjct: 138 LNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF----QHNKASEAVALV 193
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL-PDSEKVGKIISWFCK 279
+ GC + TY I L +R D A ++ KM E G + D +I CK
Sbjct: 194 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM-EKGKIEADVVIYSTVIDSLCK 252
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKY 336
+A ++T K + P + LIS LC + +L DML+ RK
Sbjct: 253 YRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLE------RK- 305
Query: 337 AIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
I P F+S+I + + + A+ L +MI P +NS+I+ + + A
Sbjct: 306 -INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEA 364
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
++ LM S+ PDV TY L++G+ ++ + E+ + + + VTY TLI G
Sbjct: 365 QQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHG 424
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + + D A + +M GV PN+ YN L+ LC
Sbjct: 425 FFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 461
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 129/276 (46%), Gaps = 2/276 (0%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
N T+ I+A ++ A + ++MI+ P+ +I+ FC + EA ++
Sbjct: 309 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 368
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
TL K P LI+ C+ + V +++ D S ++++I +
Sbjct: 369 TLMVSKDCLPDVVTYNTLINGFCKAKKVVD-GMELFRDMSRRGLVGNTVTYTTLIHGFFQ 427
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
D A+ + +M+S+G P +N+++ K G + AM + + ++ ++PD+YT
Sbjct: 428 ASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYT 487
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
Y + G G++E+ ++ + + Y+T+I G+CK + A L +MK
Sbjct: 488 YNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMK 547
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
+ G P+ YN LI++ L+ D + +L+++MR
Sbjct: 548 EDGPLPDSGTYNTLIRAH-LRDGDKAASAELIKEMR 582
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 133/291 (45%), Gaps = 13/291 (4%)
Query: 240 EALSRRKIF----DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE 295
E LSR + D A + +M+++ P + K++S K K+ +V + +
Sbjct: 34 EKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAI---AKMKKFDLVISFGEK 90
Query: 296 KKMYPPQS---VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMK 352
++ +I+ LC+ + + AL +L +I +S++ C
Sbjct: 91 MEILGVSHNLYTYNIMINCLCRRSQ-LSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGN 149
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT 412
+ A L+ +M+ G P F +++ + + A+ +++ M +G +PD+ TY
Sbjct: 150 RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG 209
Query: 413 GLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
+++G G+ + A +LN+ +K V Y T+I CK D AL L EM +
Sbjct: 210 AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK 269
Query: 473 GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRA 522
G++P+V Y+ LI LC W A +LL DM + ++ N +T +LI A
Sbjct: 270 GIRPDVFTYSSLISCLCNYG-RWSDASRLLSDMLERKINPNVVTFNSLIDA 319
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 163/364 (44%), Gaps = 38/364 (10%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
++ +C + ++ + L+ +K +G V T IL I F K G + A +F +
Sbjct: 229 VITFLCHATKVEKAFLLFQEMKMVGVTPD-VYTYTIL---IDSFCKAGLIEQAQWLFEEM 284
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
GC TY I A + K A + +M++ G P+ G ++ CK G
Sbjct: 285 RSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNI 344
Query: 284 KEAHVVY------TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
+A VY + + + Y P C++ T LA +++
Sbjct: 345 SKAFEVYAKLIGTSDSADSDFYFP-----------CEDRHT--LAPNVVT---------- 381
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+ +++ LC+ V A LL M+S G P + V++++I + KAG + A E+
Sbjct: 382 ---YGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFL 438
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M G P V+TYT L+ G+++ A ++L++ K+ + VTY +I G C++
Sbjct: 439 QMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIG 498
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT- 516
E + ALKLL+ M++ G PNV Y LI L KA + L M KG N +T
Sbjct: 499 ESEKALKLLSLMEEKGCSPNVVTYTALIDGL-GKAGKIDLSLDLFTQMSRKGCSPNYVTY 557
Query: 517 RALI 520
R LI
Sbjct: 558 RVLI 561
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 126/317 (39%), Gaps = 11/317 (3%)
Query: 181 WDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIE 240
W ++ E+E L + +I+ + A ++ C+ N TY +
Sbjct: 26 WADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLS 85
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP 300
++K W + M+ G P+ ++ +C A+ + P
Sbjct: 86 GFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPP 145
Query: 301 PQSVVAFLISSLC-QEDETVKLALDMLDDFSGEA-------RKYAIKPFSSVIRSLCRMK 352
V I S+C QE LD+ + GE K + F+ R LC +
Sbjct: 146 GYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFA---RCLCGVG 202
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT 412
A L+ +M+ +G P + ++ VI+ A + A + + M+ G+ PDVYTYT
Sbjct: 203 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYT 262
Query: 413 GLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
L+ + G +E+A + E + + VTY LI Y K ++ A + + M D
Sbjct: 263 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 322
Query: 473 GVQPNVDEYNKLIQSLC 489
G +PN Y L+ LC
Sbjct: 323 GCRPNDVTYGALVDGLC 339
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 133/315 (42%), Gaps = 37/315 (11%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
N TY ++ L + D A + + M+ +G P+ +I FCK GK A V+
Sbjct: 378 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 437
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
+ P LI + +D + LA+ +L ++ + ++++I LCR
Sbjct: 438 LQMTKCGYLPSVHTYTSLIDRM-FKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 496
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ + A LLS M +G P + ++I KAG + ++++ M +G P+ T
Sbjct: 497 IGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVT 556
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK--------LEE---- 458
Y L++ G +++A +L E K+ + Y I+G+ K LEE
Sbjct: 557 YRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESY 616
Query: 459 ------------FDC---------ALKLLNEMKDV--GVQPNVDEYNKLIQSLCLKALDW 495
DC A++L EM +V V+ + D Y LIQ+LCL A
Sbjct: 617 GTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCL-ASQV 675
Query: 496 RTAEKLLEDMRLKGL 510
A +L +M +G
Sbjct: 676 EEAFRLYSEMTRRGF 690
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 139/348 (39%), Gaps = 40/348 (11%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+ +C + + L D + G + + + + LI F K GK +A EVF +
Sbjct: 384 ALVDGLCKAHKVDHAHELLDAMLSSGCEPNHI----VYDALIDGFCKAGKIDSAQEVFLQ 439
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + + TY I+ + + D A V +M++ P+ +I C+ G+
Sbjct: 440 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGE 499
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+++A + +L EK P LI L + + + L+LD+ S + +
Sbjct: 500 SEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGK-IDLSLDLFTQMSRKGCSPNYVTYR 558
Query: 343 SVIRSLC-------------RMKDVHGAKTL--------------------LSKMISEGP 369
+I LC MK + K L L +M S G
Sbjct: 559 VLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGT 618
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMR--SRGLKPDVYTYTGLMSGYANGGQMEEA 427
P V+ +I +SKAG + AME+ K M +K D Y L+ Q+EEA
Sbjct: 619 VPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEA 678
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
+ +E + + LI+G +++++D AL+L + GV
Sbjct: 679 FRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGVN 726
>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 148/348 (42%), Gaps = 37/348 (10%)
Query: 176 EVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETY 235
E+Y W +++E+ + + E + LI +S+ G + A E F+ D+ C + +
Sbjct: 110 ELY--WKVLQELKNSAIKI-SSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAF 166
Query: 236 YFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE 295
+ L R++ F A +V +M++ PD G +I CK K ++A V++ +
Sbjct: 167 NLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTD 226
Query: 296 KKMYPPQSVVAFLISSLCQEDETVKL---------------------------------- 321
+ + P Q + + ++S LCQ +
Sbjct: 227 RGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDD 286
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A +L + + + + +I L R + A KM+ E P ++ +I
Sbjct: 287 AFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIR 346
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
S+ G +T A+ +L M RGL+PD Y L+ G+ + G ++EA + E K+
Sbjct: 347 GLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFP 406
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ TY LI G CK + A + EM+ +G P+V +N LI LC
Sbjct: 407 NNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLC 454
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 106/265 (40%), Gaps = 23/265 (8%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI F +G A + + + C N TY I + + + + A + ++M +
Sbjct: 377 NALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEK 436
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G LP +I+ CK + +EA +++ + E V+
Sbjct: 437 LGCLPSVVTFNSLINGLCKANRLEEARLLF-----------------------YQMEIVR 473
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
L G + + I ++ LC + A LL +++ G P +N +I
Sbjct: 474 KPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILI 533
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ + K G++ A ++ K M+ +G PD TY L+ G G+ E+A EI + K
Sbjct: 534 NGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCV 593
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKL 465
TY T++ C+ AL +
Sbjct: 594 PESSTYKTIMTWSCRENNISLALSV 618
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 112/271 (41%), Gaps = 20/271 (7%)
Query: 235 YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR 294
Y I LS+ A ++ +M E G PD+ +I FC G EA +
Sbjct: 341 YTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEIS 400
Query: 295 EKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDV 354
+ +P + LI +C+ + + A + + ++ F+S+I LC+ +
Sbjct: 401 KHDCFPNNHTYSILICGMCK-NGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRL 459
Query: 355 HGAKTLLSKM-----------ISEGPPPGNAVFN-----SVISAYSKAGDMTPAMEMLKL 398
A+ L +M +S+G + VF+ ++ ++G + A ++L
Sbjct: 460 EEARLLFYQMEIVRKPSLFLRLSQGT---DKVFDIASLQVMMERLCESGMILKAYKLLMQ 516
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
+ G+ PD+ TY L++G+ G + A ++ E + VTY TLI G +
Sbjct: 517 LVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGR 576
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ AL++ +M G P Y ++ C
Sbjct: 577 NEDALEIFEQMVKKGCVPESSTYKTIMTWSC 607
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Query: 191 EKGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
+ GVL + N LI F K G AF++F + G + + TY I+ L R +
Sbjct: 519 DSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNE 578
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
A + E+M++ G +P+S I++W C+ A V+
Sbjct: 579 DALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVW 619
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 86/198 (43%), Gaps = 17/198 (8%)
Query: 147 ENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALW---DIVKE------IGEKEKGVLTV 197
E L C VT ++L+ +C + +E L+ +IV++ + + V +
Sbjct: 435 EKLGCLPSVVT---FNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDI 491
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
L ++ + G A+++ + D G + + TY I + + A+ + ++
Sbjct: 492 ASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKE 551
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M G +PDS G +I + G+ ++A ++ +K P S +++ C+E+
Sbjct: 552 MQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCREN- 610
Query: 318 TVKLALDM----LDDFSG 331
+ LAL + L DF G
Sbjct: 611 NISLALSVWMKYLRDFRG 628
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 155/324 (47%), Gaps = 3/324 (0%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+ +I+ F G AA +F + G A++ T+ I L R A V ++M
Sbjct: 359 VFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEM 418
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
++ G D +I +CK G EA V+ +++ P L LC++ +
Sbjct: 419 VDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGD- 477
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
V+ A ++L + + + + ++S+I LC+ ++ A ++++M + G + +
Sbjct: 478 VRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTT 537
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I K+G+ A ML+ M +G+KP + TY LM+G+ G++E ++L + +
Sbjct: 538 LIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKN 597
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
R + VTY++L++ YC + ++ M V PN + YN LI+ C KA + + A
Sbjct: 598 VRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHC-KARNMKEA 656
Query: 499 EKLLEDMRLKGLHLNGIT-RALIR 521
++M KGL L + ALIR
Sbjct: 657 LYFHQEMIEKGLRLTASSYSALIR 680
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 141/306 (46%), Gaps = 2/306 (0%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ + A ++ ++ G +N Y I L + A V E M G D+
Sbjct: 301 GELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVF 360
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
+IS FC G A ++ +++ + + LI+ LC+ E +K A +L +
Sbjct: 361 TTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGE-LKEADRVLQEMV 419
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
+ + ++ +I C+ ++ A + ++M+ P + ++ K GD+
Sbjct: 420 DKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVR 479
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A E+L M ++GL+ +VYTY L++G G +E+A I+ E + R TY TLI
Sbjct: 480 AANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLI 539
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
CK EFD A +L EM D G++P++ YN L+ C+ +KLLE M K +
Sbjct: 540 DTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSG-RVEGGKKLLEWMLEKNV 598
Query: 511 HLNGIT 516
N +T
Sbjct: 599 RPNVVT 604
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 108/222 (48%), Gaps = 4/222 (1%)
Query: 297 KMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDV 354
+M P VV + ++ C E ++ A+ +LD+ + + + ++SVI LC V
Sbjct: 280 EMSSPPDVVTYGTMVHGYCVRGE-LENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQV 338
Query: 355 HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
A +L M G VF +VIS + GD+ A + + M+ RGL D T+T L
Sbjct: 339 SDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTAL 398
Query: 415 MSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV 474
++G G+++EA +L E + VTY LI GYCK A ++ NEM V
Sbjct: 399 INGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRV 458
Query: 475 QPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
PNV Y L LC K D R A +LL +M KGL LN T
Sbjct: 459 APNVVTYTALSDGLC-KQGDVRAANELLHEMCNKGLELNVYT 499
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 127/292 (43%), Gaps = 1/292 (0%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+ +IAL G+ A V +G + + I + A + E+M
Sbjct: 324 VYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEM 383
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+ G D +I+ C+ G+ KEA V +K + LI C+
Sbjct: 384 QKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNM 443
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
V+ A + ++ G + ++++ LC+ DV A LL +M ++G +NS
Sbjct: 444 VE-AFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNS 502
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I+ K G++ AM ++ M + G + DVYTYT L+ G+ + A +L E
Sbjct: 503 LINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKG 562
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
+ S TY+ L+ G+C + KLL M + V+PNV YN L++ C+
Sbjct: 563 IKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCI 614
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 119/255 (46%), Gaps = 2/255 (0%)
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
C+ E S PD G ++ +C G+ + A + K + +V +I+ LC
Sbjct: 275 CQHFDEMSSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCN 334
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
+ + V AL +L+D + F++VI C D+ A+ L +M G
Sbjct: 335 KGQ-VSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRV 393
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
++I+ +AG++ A +L+ M +GL DV TYT L+ GY G M EA + NE
Sbjct: 394 THTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEM 453
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
+ VTY L G CK + A +LL+EM + G++ NV YN LI LC K +
Sbjct: 454 VGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLC-KFGN 512
Query: 495 WRTAEKLLEDMRLKG 509
A +++ +M G
Sbjct: 513 LEQAMRIMTEMEAAG 527
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 137/322 (42%), Gaps = 9/322 (2%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEK--EKGVLTVEILNELIALFSKLGKGKAAFEVF 220
AL+ +C + KE +++E+ +K + V+T +L I + K G AF V
Sbjct: 397 ALINGLCRAGELKEA---DRVLQEMVDKGLDVDVVTYTVL---IDGYCKRGNMVEAFRVH 450
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
N+ N TY + L ++ A + +M G + +I+ CK
Sbjct: 451 NEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKF 510
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
G ++A + T LI +LC+ E + A +ML + + K +I
Sbjct: 511 GNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDR-AHNMLQEMLDKGIKPSIAT 569
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++ ++ C V G K LL M+ + P +NS++ Y +M E+ K M
Sbjct: 570 YNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMH 629
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
S+ + P+ TY L+ G+ M+EA E + RL+ +Y LIR K ++F
Sbjct: 630 SQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFS 689
Query: 461 CALKLLNEMKDVGVQPNVDEYN 482
A ++M++ G+ D Y+
Sbjct: 690 EARVFFDKMRNEGLTAEPDVYS 711
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 31/152 (20%)
Query: 391 PAMEMLKLMRSRGLKP---------------------------DVYTYTGLMSGYANGGQ 423
P+ E+L+ +R GL P +V ++ L+ + G+
Sbjct: 211 PSAELLRRLRQYGLSPSPESCNAVLSRLPLDEAIALFRELPDKNVCSHNILLKALLSAGR 270
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
+++AC+ +E S VTY T++ GYC E + A+KLL+EM G++ N Y
Sbjct: 271 LKDACQHFDEMS---SPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTS 327
Query: 484 LIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
+I LC K A ++LEDM + G+ L+ +
Sbjct: 328 VIALLCNKG-QVSDALRVLEDMTMHGVALDAV 358
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 154/348 (44%), Gaps = 19/348 (5%)
Query: 190 KEKGVLTVEILNELIALFSKLG-----------------KGKAAFEVFNKFGDYGCVANQ 232
+ GV VEI+N L++ +S G K + A+E F G +
Sbjct: 131 RRSGVSRVEIVNSLVSTYSNCGSNDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSI 190
Query: 233 ETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTL 292
+ I +L R + AW + +++ +G + + +++ CK GK ++ +
Sbjct: 191 DACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSE 250
Query: 293 AREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMK 352
+EK +YP LIS+ + ++ A +++ + + +++VI LC+
Sbjct: 251 VQEKGVYPDIVTYNTLISAYSSQG-LMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHG 309
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT 412
AK + ++M+ G P + + S++ K GD + MRSR + PD+ ++
Sbjct: 310 KYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFS 369
Query: 413 GLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
+MS + G +++A N K+ V Y LI+GYC+ A+ L NEM
Sbjct: 370 SMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQ 429
Query: 473 GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
G +V YN ++ LC + + A+KL +M +GL + T ++
Sbjct: 430 GCAMDVVTYNTILHGLCKRKM-LGEADKLFNEMTERGLFPDSYTLTIL 476
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 159/361 (44%), Gaps = 14/361 (3%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
V D L++ + +E Y + +++ G ++++ N LI ++G + A+ +
Sbjct: 157 VFDLLIRTFVQARKLREAYEAFTLLRSKGY----TVSIDACNALIGSLVRIGWVELAWRI 212
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
+ + G N T + AL + + + ++ E G PD +IS +
Sbjct: 213 YQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSS 272
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
G +EA + K P +I+ LC+ + + + E + +
Sbjct: 273 QGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGK-----YERAKEVFAEMLRSGLS 327
Query: 340 PFSSVIRSL----CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
P S+ RSL C+ D + + S M S P F+S++S ++++G++ A+
Sbjct: 328 PDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMY 387
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
++ GL PD YT L+ GY G + EA + NE + + VTY+T++ G CK
Sbjct: 388 FNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCK 447
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
+ A KL NEM + G+ P+ LI C K + + A +L + M+ K + L+ +
Sbjct: 448 RKMLGEADKLFNEMTERGLFPDSYTLTILIDGHC-KLGNLQNAMELFKKMKEKRIKLDVV 506
Query: 516 T 516
T
Sbjct: 507 T 507
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 155/337 (45%), Gaps = 15/337 (4%)
Query: 161 VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLT-VEILNELIALFSKLGKGKAAFEV 219
++ ++ A+C GK E + + E+ +EKGV + N LI+ +S G + AFE+
Sbjct: 228 LNIMVNALCKD-GKME--KVGTFLSEV--QEKGVYPDIVTYNTLISAYSSQGLMEEAFEL 282
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
+ G TY I L + ++ A V +M+ +G PDS ++ CK
Sbjct: 283 MHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACK 342
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
G A E +++ R + + P + ++S + LD + ++ +
Sbjct: 343 KGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGN-----LDKALMYFNSVKEAGLI 397
Query: 340 P----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
P ++ +I+ CR + A L ++M+ +G +N+++ K + A ++
Sbjct: 398 PDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 457
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
M RGL PD YT T L+ G+ G ++ A E+ + K+ +L VTY+TL+ G+ K
Sbjct: 458 FNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGK 517
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
+ + D A ++ +M + P ++ L+ +LC K
Sbjct: 518 VGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKG 554
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 139/326 (42%), Gaps = 39/326 (11%)
Query: 190 KEKGVLTVEILNE-LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
KE G++ ++ LI + + G A + N+ GC + TY + L +RK+
Sbjct: 392 KEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 451
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM---------- 298
A + +M E G PDS + +I CK G + A ++ +EK++
Sbjct: 452 GEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTL 511
Query: 299 -------------------------YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEA 333
P + L+++LC + + A + D+ ++
Sbjct: 512 LDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSE-AFRVWDEMISKS 570
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
K + +S+I+ CR + + L KMISEG P +N++I + K +M+ A
Sbjct: 571 IKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAF 630
Query: 394 EMLKLMRSR--GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
++K M + GL PDV+TY ++ G+ QM+EA +L + + TY +LI
Sbjct: 631 GLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLIN 690
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPN 477
G+ + A + +EM G P+
Sbjct: 691 GFVSQDNLTEAFRFHDEMLQRGFSPD 716
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 140/314 (44%), Gaps = 4/314 (1%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
+ +++LF++ G A FN + G + + Y I+ R+ + A ++ +M+
Sbjct: 368 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEML 427
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G D I+ CK EA ++ E+ ++P + LI C+ +
Sbjct: 428 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLG-NL 486
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
+ A+++ + K + +++++ ++ D+ AK + + M+S+ P F+ +
Sbjct: 487 QNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSIL 546
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
++A G ++ A + M S+ +KP V ++ GY G + L +
Sbjct: 547 VNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGF 606
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEM--KDVGVQPNVDEYNKLIQSLCLKALDWRT 497
++Y+TLI G+ K E A L+ +M K G+ P+V YN ++ C + +
Sbjct: 607 VPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFC-RENQMKE 665
Query: 498 AEKLLEDMRLKGLH 511
AE +L M +G++
Sbjct: 666 AEAVLRKMIERGVN 679
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 111/288 (38%), Gaps = 63/288 (21%)
Query: 301 PQSVVAFLISSLCQEDETVKLALDMLDD--FSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
P +VV L C+ D + L +D F+ K+ S++I L R + A+
Sbjct: 68 PLAVVEVLYR--CRND--LSLGQRFVDQLGFNFPNFKHTSLSLSAMIHILVRSGRLSDAQ 123
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGD-----------------MTPAMEMLKLMRS 401
+ + +MI + NS++S YS G + A E L+RS
Sbjct: 124 SCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVFDLLIRTFVQARKLREAYEAFTLLRS 183
Query: 402 R-----------------------------------GLKPDVYTYTGLMSGYANGGQMEE 426
+ G+ +VYT +++ G+ME+
Sbjct: 184 KGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEK 243
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
L+E ++ VTY+TLI Y + A +L++ M G P V YN +I
Sbjct: 244 VGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVIN 303
Query: 487 SLCLKALDWRTAEKLLEDMRLKGLHLNGIT--RALIRAVKELEEDAIE 532
LC K + A+++ +M GL + T L+ A K + DA+E
Sbjct: 304 GLC-KHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACK--KGDAVE 348
Score = 45.4 bits (106), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 64/157 (40%), Gaps = 10/157 (6%)
Query: 164 LLKAICSSVGKKEVYALWD--IVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
L+ A+CS E + +WD I K I TV I N +I + + G
Sbjct: 546 LVNALCSKGHLSEAFRVWDEMISKSIKP------TVMICNSMIKGYCRSGNASDGEIFLE 599
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET--GSLPDSEKVGKIISWFCK 279
K G V + +Y I + + A+ + +KM E G +PD I+ FC+
Sbjct: 600 KMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCR 659
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+ KEA V E+ + P +S LI+ +D
Sbjct: 660 ENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQD 696
>gi|302757477|ref|XP_002962162.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
gi|300170821|gb|EFJ37422.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
Length = 484
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 137/312 (43%), Gaps = 6/312 (1%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V N ++ + LG+ A F K G C N TY I L + DWA +
Sbjct: 114 VTAYNVVLKGYCDLGRVGRALIKFGKMGK-TCKPNVATYNTVINGLCKFGKIDWAVHLFT 172
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
++ PD ++ C+ + + A VY + E + C+E
Sbjct: 173 RLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKE- 231
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD-VHGAKTLLSKMISEGPPPGNAV 375
V AL++L K ++ ++ +I +C+ K+ + A L +M+ PP
Sbjct: 232 RRVDEALEVLKTMIQRGCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVT 291
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+ ++I SK ++ +E+ K M GL PD Y Y L+ + +++EA IL +A
Sbjct: 292 YGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAA 351
Query: 436 KNHSRLSPVTYHTLIRGYCKLEE--FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
+NH Y TLI GYC+ + D AL L MKD V PNV YN +++ LC K
Sbjct: 352 RNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVITYNIVLRGLC-KTG 410
Query: 494 DWRTAEKLLEDM 505
+ A ++ ++M
Sbjct: 411 RFDEAYQIFQEM 422
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 110/267 (41%), Gaps = 20/267 (7%)
Query: 245 RKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSV 304
RK FDW+ + G D +++ + + +EA V RE + S+
Sbjct: 28 RKFFDWSSK------QEGYRHDVYCYTRLLHHLVRARRTREA--VRFFKRELCAHCRPSL 79
Query: 305 VAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAK 358
+F +I C + + G R I P ++ V++ C + V A
Sbjct: 80 YSFTIIIQCFCNVRNPGRAW-----RYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRAL 134
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
KM + P A +N+VI+ K G + A+ + + + PD +TY+ L+ G
Sbjct: 135 IKFGKM-GKTCKPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGL 193
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
++E A ++ + + + Y+ + G+CK D AL++L M G +P+V
Sbjct: 194 CQAERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSV 253
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDM 505
YN +I +C A +L + M
Sbjct: 254 VTYNCIINGVCQYKNRIEEAYRLFQQM 280
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 2/183 (1%)
Query: 308 LISSLCQEDETVKLALDMLDDFS-GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
L+ S+ + ++ LA D S E ++ + ++ ++ L R + A + +
Sbjct: 13 LVGSVIRRVPSLALARKFFDWSSKQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELC 72
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
P F +I + + A L MRS G+ PDV Y ++ GY + G++
Sbjct: 73 AHCRPSLYSFTIIIQCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGR 132
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A + K + + TY+T+I G CK + D A+ L + V P+ Y+ L+
Sbjct: 133 ALIKFGKMGKT-CKPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVH 191
Query: 487 SLC 489
LC
Sbjct: 192 GLC 194
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 141/306 (46%), Gaps = 4/306 (1%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI +++LG AF +F + G V + TY I+ L R D A + ++MI+
Sbjct: 334 NTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIK 393
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQ-SVVAFLISSLCQEDETV 319
G PD ++ FCK G A ++ + + P + + + ++ L D +
Sbjct: 394 HGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSK 453
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
A M ++ + ++ I L ++ ++ A L+ KM+ G P + + S+
Sbjct: 454 --AFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSI 511
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I A+ AG + A + M S+G+ P V TYT L+ YA G+++ A E +
Sbjct: 512 IHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGV 571
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
+ +TY+ LI G CK+ + D A K EM+ G+ PN Y LI C W+ A
Sbjct: 572 HPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENC-NLGHWQEAL 630
Query: 500 KLLEDM 505
+L +DM
Sbjct: 631 RLYKDM 636
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 126/264 (47%), Gaps = 2/264 (0%)
Query: 248 FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF 307
D A V M+E G P ++ FCK GK +EA + ++ P
Sbjct: 171 IDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNV 230
Query: 308 LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
L++ L E ++ A +++ + + + + +IR C + A L +M+S
Sbjct: 231 LVNGLSHSGE-LEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSR 289
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P +N+++ K G ++ A ++L +M ++ L PD+ +Y L+ GY G + EA
Sbjct: 290 GAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEA 349
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
+ E + S VTY+TLI G C++ + D A++L +EM G P+V + L++
Sbjct: 350 FLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRG 409
Query: 488 LCLKALDWRTAEKLLEDMRLKGLH 511
C K + A++L ++M +GL
Sbjct: 410 FC-KLGNLPMAKELFDEMLNRGLQ 432
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 164/378 (43%), Gaps = 19/378 (5%)
Query: 149 LVCFFKWVTSGV---------VDALLKAICSSVG-KKEVYALWDIVKEIGEKEKGVLTVE 198
L+ F+K V+ G+ V LL+ SS+ +EVY +++ E G + TV
Sbjct: 139 LLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVY---NVMVECGIRP----TVV 191
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
N ++ F K GK + A ++ + GC+ N TY + LS + A + ++M
Sbjct: 192 TYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEM 251
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+ G + +I +C+ G+ EA + + P ++ LC+
Sbjct: 252 LRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGR- 310
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
V A +LD + + ++++I R+ ++ A L +++ G P +N+
Sbjct: 311 VSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNT 370
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I + GD+ AM + M G PDV+T+T L+ G+ G + A E+ +E
Sbjct: 371 LIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRG 430
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
+ Y T I G KL + A + EM G P++ YN I L K + + A
Sbjct: 431 LQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLH-KLGNLKEA 489
Query: 499 EKLLEDMRLKGLHLNGIT 516
+L++ M GL + +T
Sbjct: 490 SELVKKMLYNGLVPDHVT 507
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 132/282 (46%), Gaps = 8/282 (2%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMI----ETGSLPDSEKVGKIISW-FCKGGKAKEAHV 288
TY ++ L+R + A+ V EK++ E G + ++ W + K ++ +
Sbjct: 83 TYAVILDILARNGLMRSAYCVMEKVVSVKMENGV--VDVLILDLLLWIYAKKSMLEKCLL 140
Query: 289 VYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSL 348
V+ K M P ++ L D ++ +A ++ + + + +++++ S
Sbjct: 141 VFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSF 200
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
C+ V A LL +M G P + +N +++ S +G++ A E+++ M GL+
Sbjct: 201 CKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSA 260
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNE 468
YTY L+ GY GQ++EA + E + + VTY+T++ G CK A KLL+
Sbjct: 261 YTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDV 320
Query: 469 MKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
M + + P++ YN LI + + A L ++R +GL
Sbjct: 321 MVNKNLMPDLVSYNTLIYGYT-RLGNIGEAFLLFAELRFRGL 361
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 157/334 (47%), Gaps = 17/334 (5%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
D L++ +C A+ D + + + V V L+ K K A ++ +
Sbjct: 164 DTLIRGLCGRGRTANALAVLDEML----RRRCVPDVVTYTILLEATCKRSGYKQAMKLLD 219
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ D GC + TY + + + D A + + G P++ ++ C
Sbjct: 220 EMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAE 279
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
+ ++A + +K P +VV F LIS LC++ V+ AL++L+ KY
Sbjct: 280 RWEDAEELMGEMGQKGC--PPNVVTFNMLISFLCRKG-LVEPALEVLEQIP----KYGCS 332
Query: 340 P----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
P ++ ++ + C+ K + A L M+S G P +N++++A ++G++ A+E+
Sbjct: 333 PNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVEL 392
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
L ++ +G P + +Y ++ G G+ +EA E+LNE + +TY T+ G C+
Sbjct: 393 LHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCR 452
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + A++ +++D+G++PN YN +I LC
Sbjct: 453 EDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLC 486
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 3/119 (2%)
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P +N++++ Y AG + A + R ++ D YT L+ G G+ A +
Sbjct: 126 PDVMAYNAMMAGYCGAGQVDAAR---RWCAERAVERDAYTCDTLIRGLCGRGRTANALAV 182
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
L+E + VTY L+ CK + A+KLL+EM+D G P++ YN ++ +C
Sbjct: 183 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGIC 241
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 13/172 (7%)
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
+RSL R ++ A +++ P ++I S +G A +L
Sbjct: 74 LRSLVRRGELDEAL----RLVGSARRPDAGTCAALIKKLSASGRTAEARRVLA-----AC 124
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
PDV Y +M+GY GQ++ A E T TLIRG C AL
Sbjct: 125 GPDVMAYNAMMAGYCGAGQVDAARRWCAERAVERD---AYTCDTLIRGLCGRGRTANALA 181
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+L+EM P+V Y L+++ C ++ ++ A KLL++MR KG + +T
Sbjct: 182 VLDEMLRRRCVPDVVTYTILLEATCKRS-GYKQAMKLLDEMRDKGCTPDIVT 232
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 140/298 (46%), Gaps = 10/298 (3%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A + K +GC A+ +Y ++ L K + + ++M+ P+ +I
Sbjct: 200 AVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIG 259
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
+ C+ G + H V E P + A +I +C+E L++ ++
Sbjct: 260 YLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGH-----LEVANEILNRMPS 314
Query: 336 YAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
Y +KP +++V++ LC + A+ LLS+M + P + FN ++ + + G +
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
+E+L+ M S G PDV TYT +++G+ G ++EA +L + + V+Y +++
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
G C + A +L+++M G PN +N LI LC K L + E LL+ M + G
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE-LLKQMLVNG 491
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 129/296 (43%), Gaps = 2/296 (0%)
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
K A E+ ++ C + T+ ++ + + D + E+M+ G +PD +
Sbjct: 338 KEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTV 397
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEA 333
I+ FCK G EA ++ P ++ LC V A +++ +
Sbjct: 398 INGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVD-AEELMSQMIQQG 456
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
F+++I LC+ V A LL +M+ G P +++VI KAG A+
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
E+L +M ++G+ P+ Y+ + + G++ + ++ + K R V Y+ +I
Sbjct: 517 ELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSL 576
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
CK E D A+ M G PN Y LI+ L + L + A++LL ++ +G
Sbjct: 577 CKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLA-KEAQELLSELCSRG 631
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 126/294 (42%), Gaps = 10/294 (3%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
K G + A E+ N+ YG N Y ++ L + + A + +M + D
Sbjct: 296 ICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLD 355
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLAL 323
++ +FC+ G + P +I+ C+E DE V L
Sbjct: 356 DVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVML-- 413
Query: 324 DMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAY 383
L S K ++ V++ LC A+ L+S+MI +G PP FN++I+
Sbjct: 414 --LKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFL 471
Query: 384 SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
K G + A+E+LK M G PD+ +Y+ ++ G G+ EEA E+LN +
Sbjct: 472 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNT 531
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
+ Y ++ + + +++ + +KD ++ + YN +I SLC + W T
Sbjct: 532 IIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKR---WET 582
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 151/363 (41%), Gaps = 46/363 (12%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ A EV ++ GC Y+ +EA R F + V E M G D+
Sbjct: 125 GRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNC 184
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS-VVAF--LISSLCQEDETVKLALDMLD 327
+++ C+ G EA L R+ + ++ +V++ ++ LC + +++D
Sbjct: 185 NLVLNAICEQGCVDEA---VGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE-ELMD 240
Query: 328 DFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG 387
+ I F+++I LCR +L++M G P ++ ++I K G
Sbjct: 241 EMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEG 300
Query: 388 DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV--- 444
+ A E+L M S GLKP+V Y ++ G + + +EA E+L+E + L V
Sbjct: 301 HLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFN 360
Query: 445 --------------------------------TYHTLIRGYCKLEEFDCALKLLNEMKDV 472
TY T+I G+CK D A+ LL M
Sbjct: 361 ILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSC 420
Query: 473 GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAV--KELEED 529
G +PN Y +++ LC A W AE+L+ M +G N +T LI + K L E
Sbjct: 421 GCKPNTVSYTIVLKGLC-SAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQ 479
Query: 530 AIE 532
AIE
Sbjct: 480 AIE 482
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 123/317 (38%), Gaps = 53/317 (16%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
N T++ + L R A V ++M G P I+ C+ G + + V
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169
Query: 291 TLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFSSVIRS 347
K +++++C++ DE V L L L F EA I +++V++
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGL-LRKLAFFGCEAD---IVSYNAVLKG 225
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
LC K + L+ +M+ P FN++I + G E+L M G PD
Sbjct: 226 LCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
+ Y T+I G CK + A ++LN
Sbjct: 286 IRMYA-----------------------------------TIIDGICKEGHLEVANEILN 310
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT----------R 517
M G++PNV YN +++ LC A W+ AE+LL +M K L+ +T
Sbjct: 311 RMPSYGLKPNVVCYNTVLKGLC-SAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369
Query: 518 ALIRAVKELEEDAIENG 534
L+ V EL E + +G
Sbjct: 370 GLVDRVIELLEQMLSHG 386
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 57/136 (41%), Gaps = 1/136 (0%)
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
PP F V+ G + A+E+L M +G P Y ++ G +
Sbjct: 108 PPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVR 167
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+L L + ++ C+ D A+ LL ++ G + ++ YN +++ LC
Sbjct: 168 VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLC 227
Query: 490 LKALDWRTAEKLLEDM 505
+ A W E+L+++M
Sbjct: 228 M-AKRWGDVEELMDEM 242
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 133/317 (41%), Gaps = 8/317 (2%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
LN LI + L K V + G N T+ ++ L A + KM+
Sbjct: 130 LNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMV 189
Query: 260 ETGSLPDSEKVGKIISWFCKGG------KAKEAHVVYTLAREKKMYPPQSVVAFLISSLC 313
G P+ G +++ C G K E + + P +I SLC
Sbjct: 190 RMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLC 249
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
+ D + ++ + G + +SS+I +C GAK L ++M+ EG P
Sbjct: 250 K-DGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNV 308
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
FN +I A KAG M A +LKLM RG PD +TY L+ G+ G++++A ++
Sbjct: 309 VTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVS 368
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
+ V+Y+ LI GYCK A KL EM + P V YN L+ L +
Sbjct: 369 MESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGL-FREG 427
Query: 494 DWRTAEKLLEDMRLKGL 510
R A L +M++ L
Sbjct: 428 KVRDAWNLFGEMKVHDL 444
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 165/392 (42%), Gaps = 15/392 (3%)
Query: 133 DFVLKVLETPLVLGE--NLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEK 190
DF L VL L G N V F +L+K +C E L + +G +
Sbjct: 144 DFGLAVLGEMLRRGHSPNTVTF---------TSLVKGLCLGSRISEATGLLRKMVRMGYR 194
Query: 191 EKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCV--ANQETYYFTIEALSRRKIF 248
V +LN L + + K E+ N G +G N Y I++L + +
Sbjct: 195 PNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLI 254
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
D + +M G PD II C G+ + A ++ ++ ++P L
Sbjct: 255 DKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVL 314
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
I +LC+ + ++ A +L ++++I C + A+ L M S+G
Sbjct: 315 IDALCKAGK-MEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKG 373
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
+N +I+ Y K+G M A ++ + M + + P V TY L++G G++ +A
Sbjct: 374 IETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAW 433
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ E K + TY+ L+ G CK A++L + +++ QP++ +N LI L
Sbjct: 434 NLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGL 493
Query: 489 CLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
C KA A +L + +GL N IT ++
Sbjct: 494 C-KARKIEIARELFNRLSHEGLEPNVITYTVM 524
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 163/379 (43%), Gaps = 21/379 (5%)
Query: 130 LHEDFVLKVLETPLVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGE 189
LHE+ + + + NLVC+ + S D L+ KE++ +
Sbjct: 219 LHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDK------GKELF--------LEM 264
Query: 190 KEKGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
K +G+ V + +I G+ + A +FN+ D G N T+ I+AL +
Sbjct: 265 KGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKM 324
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
+ A + + MI+ G PD+ +I FC G+ +A ++ K + L
Sbjct: 325 EEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVL 384
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
I+ C+ V+ A + + + + +++++ L R V A L +M
Sbjct: 385 INGYCKSGRMVE-AKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHD 443
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P + +N ++ K ++ AME+ + + +P + + L+ G ++E A
Sbjct: 444 LTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIAR 503
Query: 429 EILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
E+ N + +H L P +TY +I G CK + + A L M++ G PN+ +N L++
Sbjct: 504 ELFN--RLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMR 561
Query: 487 SLCLKALDWRTAEKLLEDM 505
C + + + +LL++M
Sbjct: 562 GFC-QNDEMQKVVELLQEM 579
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 136/318 (42%), Gaps = 6/318 (1%)
Query: 212 KGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVG 271
KGK E+F + G + Y I + ++ A + +M++ G P+
Sbjct: 256 KGK---ELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFN 312
Query: 272 KIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSG 331
+I CK GK +EA+ + L ++ P LI C E + A D+
Sbjct: 313 VLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGR-IDDARDLFVSMES 371
Query: 332 EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
+ + ++ +I C+ + AK L +M+ + P +N++++ + G +
Sbjct: 372 KGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRD 431
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
A + M+ L P+ TY L+ G + EA E+ + + + + S ++ LI
Sbjct: 432 AWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLID 491
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH 511
G CK + + A +L N + G++PNV Y +I LC K+ A+ L M KG
Sbjct: 492 GLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLC-KSGQLENAKDLFLGMEEKGCA 550
Query: 512 LNGIT-RALIRAVKELEE 528
N +T L+R + +E
Sbjct: 551 PNLVTFNTLMRGFCQNDE 568
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 7/179 (3%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
I F++++ ++ ++K +L +M G P N +I+ Y + + +L
Sbjct: 92 ISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLG 151
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M RG P+ T+T L+ G G ++ EA +L + + R + VTY TL+ G C
Sbjct: 152 EMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTG 211
Query: 458 EFDCALKLLNEMKD------VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
A+KL EM + V ++PN+ Y +I SLC L + E LE M+ +G+
Sbjct: 212 NTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLE-MKGRGI 269
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 1/149 (0%)
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A ++ + +I P P + FN+++ A +K + + K M GL PD T L++
Sbjct: 76 AFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILIN 135
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
Y N +++ +L E + + VT+ +L++G C A LL +M +G +P
Sbjct: 136 CYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRP 195
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
NV Y L+ LC+ + A KL E+M
Sbjct: 196 NVVTYGTLLNGLCMTG-NTMLAVKLHEEM 223
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 138/304 (45%), Gaps = 10/304 (3%)
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+F + D G + TY+ I++L + D A+++ +K G P+ + FC
Sbjct: 147 MFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFC 206
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKY 336
K G+ K+A ++ + P +A+ +I C++++ AL+ L + +
Sbjct: 207 KTGRLKDALEIF------RNIPSPDAIAYNAIIHGHCRKND-CDGALEFLKEMNERKVAP 259
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ ++ +I LC+ A +L +M+ G P FNS++ KAG A +L
Sbjct: 260 DVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLL 319
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
+M R +P TY L+SG ++ A ++++E + VTY L G CK
Sbjct: 320 AVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKR 379
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
D A +L+ EM G PN+ YN LI LC KA A +LLE + G + +T
Sbjct: 380 GRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLC-KASKTEKAYELLESLVSSGFVPDVVT 438
Query: 517 RALI 520
+I
Sbjct: 439 YTII 442
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 148/333 (44%), Gaps = 9/333 (2%)
Query: 184 VKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALS 243
++E E+ +G L +++ ++ +L + A F GD G + T ++ L
Sbjct: 80 IRERLEQWRGTLQPAVVSRVL---QRLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLL 136
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS 303
D ++ E+M++ G PDS +I C+ + +A + A+ + P S
Sbjct: 137 ENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVS 196
Query: 304 VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSK 363
V L + C+ T +L D L+ F AI ++++I CR D GA L +
Sbjct: 197 VYTILTRAFCK---TGRLK-DALEIFRNIPSPDAIA-YNAIIHGHCRKNDCDGALEFLKE 251
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
M P +N +I KA A EML M RG+ PD T+ +M G G+
Sbjct: 252 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 311
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
E A +L + + R S TY+TLI G CK + D A L++E G P+V Y+
Sbjct: 312 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSI 371
Query: 484 LIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
L LC + A +L+++M KG N +T
Sbjct: 372 LADGLCKRG-RIDEAFELVKEMSGKGCTPNLVT 403
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 138/344 (40%), Gaps = 40/344 (11%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I + A E + + + TY I+ L + D A + +M++
Sbjct: 230 NAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVD 289
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD+ I+ CK GK + AH + + E+ P LIS LC++ + V
Sbjct: 290 RGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQ-QNVD 348
Query: 321 LALDMLDDF-----------------------------------SGEARKYAIKPFSSVI 345
A D++D+F SG+ + ++++I
Sbjct: 349 RAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLI 408
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
LC+ A LL ++S G P + ++ K G + A++M++ M RG
Sbjct: 409 DGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCT 468
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
P V TYT LM G G+++EA I E + Y +L+ GYCK A K+
Sbjct: 469 PSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKV 528
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
++ ++ P +D YN L+ C K + EDM +G
Sbjct: 529 VDGIRGT---PYIDVYNALMDGYC-KEGRLDEIPNVFEDMACRG 568
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 132/308 (42%), Gaps = 5/308 (1%)
Query: 181 WDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIE 240
+++VKE+ K + N LI K K + A+E+ G V + TY ++
Sbjct: 386 FELVKEMSGK-GCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVD 444
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP 300
L + D A + E M++ G P ++ C+ G+ EAH ++ K
Sbjct: 445 GLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTA 504
Query: 301 PQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTL 360
L++ C+ T K A ++D G I +++++ C+ + +
Sbjct: 505 DALAYVSLVNGYCKSSRT-KEAQKVVDGIRGTPY---IDVYNALMDGYCKEGRLDEIPNV 560
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
M G P +N V+ K G + A L+ M S G PDV +Y ++ G
Sbjct: 561 FEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFK 620
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
+ +EA ++L++ + VTY+TL+ +CK E FD A+ +L M GV P+
Sbjct: 621 ASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVT 680
Query: 481 YNKLIQSL 488
YN LI L
Sbjct: 681 YNTLISGL 688
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 140/326 (42%), Gaps = 9/326 (2%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
++K++C + + + D K G K + V + L F K G+ K A E+F
Sbjct: 166 VIKSLCQMNQIDKAFTMLDKAKVRGFKPE----VSVYTILTRAFCKTGRLKDALEIFRNI 221
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
+A Y I R+ D A ++M E PD +I CK K
Sbjct: 222 PSPDAIA----YNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKT 277
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
+A + ++ + P ++ LC+ + + A +L + + + +++
Sbjct: 278 DKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK-FERAHSLLAVMAERNCRPSCCTYNT 336
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
+I LC+ ++V AK L+ + +S G P ++ + K G + A E++K M +G
Sbjct: 337 LISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKG 396
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
P++ TY L+ G + E+A E+L + VTY ++ G CK D AL
Sbjct: 397 CTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKAL 456
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLC 489
K++ M G P+V Y L++ LC
Sbjct: 457 KMVEGMLKRGCTPSVITYTALMEGLC 482
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 148/356 (41%), Gaps = 10/356 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ +C + ++ Y L + + G V I++ L K G+ A ++
Sbjct: 405 NTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGL----CKEGRLDKALKMVE 460
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
GC + TY +E L R D A + ++M+ D+ +++ +CK
Sbjct: 461 GMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSS 520
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ KEA V R P V L+ C+E ++ ++ +D + IK +
Sbjct: 521 RTKEAQKVVDGIRGT---PYIDVYNALMDGYCKEGRLDEIP-NVFEDMACRGCVPNIKTY 576
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+ V+ LC+ V A L M S G P +N +I KA A ++L M
Sbjct: 577 NIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQ 636
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+ PD TY LM+ + + ++A IL K VTY+TLI G +
Sbjct: 637 AGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGD 696
Query: 462 ALKLLNEMKDVG-VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A +L++EM G V YN +I LC + + A L++ M G+ N +T
Sbjct: 697 AYELMHEMLRNGCVVSACTTYNTIIDRLCKEGC-LKQALLLMDHMTGHGVEANTVT 751
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 142/307 (46%), Gaps = 7/307 (2%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I K K K A +V ++ G + TY + + + FD A + + MI+
Sbjct: 612 NIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIK 671
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAH-VVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
G PD+ +IS + + +A+ +++ + R + + +I LC+E +
Sbjct: 672 AGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEG-CL 730
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
K AL ++D +G + ++ I LC+ + A +LLS+M + + +V
Sbjct: 731 KQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL---RDEVSYTTV 787
Query: 380 ISAYSKAGDMTPAMEMLKLMRS-RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
I KA + A ++ + M + +GL +T+ L+ + +++EA +L +
Sbjct: 788 IIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRG 847
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
S +TY+ +I CKL++ D A +L +EM G+ + Y LI LC + + A
Sbjct: 848 CSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQG-RGKEA 906
Query: 499 EKLLEDM 505
++LE+M
Sbjct: 907 LQVLEEM 913
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 155/338 (45%), Gaps = 8/338 (2%)
Query: 151 CFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKL 210
C+ +T + L++A C+ G + L D +++ G K V N LI K
Sbjct: 239 CYPDVITYTI---LIEATCNDSGVGQAMKLLDEMRKKGCKPD----VVTYNVLINGICKE 291
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ A + N YGC N T+ + ++ + A + M+ G P
Sbjct: 292 GRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTF 351
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
+I++ C+ A V + P L+ CQE + + A++ L+
Sbjct: 352 NILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDR-AIEYLEIMV 410
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
I +++++ +LC+ V A +L+++ S+G P +N+VI +K G
Sbjct: 411 SRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTE 470
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A+E+L+ MR +GLKPD+ TY+ L+ G G+++EA +I ++ + + S VTY+ ++
Sbjct: 471 YAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIM 530
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
G CK ++ A+ L M + G +P Y LI+ +
Sbjct: 531 LGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGI 568
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 134/288 (46%), Gaps = 1/288 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N ++ GK K A EV ++ C + TY IEA A + ++M +
Sbjct: 212 NTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRK 271
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD +I+ CK G+ EA P ++ S+C +
Sbjct: 272 KGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMD 331
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A +L D + ++ F+ +I LCR + + A +L KM G P + +N ++
Sbjct: 332 -AERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLL 390
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ + M A+E L++M SRG PD+ TY L++ G+++ A EILN+
Sbjct: 391 HGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCS 450
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+TY+T+I G K+ + + A++LL EM+ G++P++ Y+ L++ L
Sbjct: 451 PVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGL 498
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 144/349 (41%), Gaps = 40/349 (11%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F + GK K A + + G V + TY I + D A V E+M
Sbjct: 147 LIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---S 203
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD I+ C GK KEA V +++ YP LI + C D V A
Sbjct: 204 VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCN-DSGVGQA 262
Query: 323 LDMLDDFSGEARK-------------------------------YAIKP----FSSVIRS 347
+ +LD+ + K Y KP + ++RS
Sbjct: 263 MKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRS 322
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
+C A+ LLS M+ +G P FN +I+ + + A+++L+ M G P+
Sbjct: 323 MCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPN 382
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
+Y L+ G+ +M+ A E L VTY+TL+ CK + D A+++LN
Sbjct: 383 SLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILN 442
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++ G P + YN +I L K A +LLE+MR KGL + IT
Sbjct: 443 QLSSKGCSPVLITYNTVIDGL-TKVGKTEYAVELLEEMRRKGLKPDIIT 490
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 124/261 (47%), Gaps = 5/261 (1%)
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
E+MI G +PD +I FC+ GK K+A + + P LI C+
Sbjct: 130 ERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKS 189
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
E K AL++L+ S + +++++RSLC + A +L + + P
Sbjct: 190 GEIDK-ALEVLERMSVAP---DVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVIT 245
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+ +I A + AM++L MR +G KPDV TY L++G G+++EA + LN
Sbjct: 246 YTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 305
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+ + +T++ ++R C + A +LL++M G P+V +N LI LC K L
Sbjct: 306 SYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLG 365
Query: 496 RTAEKLLEDMRLKGLHLNGIT 516
R + +LE M G N ++
Sbjct: 366 RAID-VLEKMPKHGCVPNSLS 385
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 97/227 (42%), Gaps = 4/227 (1%)
Query: 194 VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWS 253
V+T IL + LG+ A +V K +GCV N +Y + + K D A
Sbjct: 348 VVTFNILINFLCRKRLLGR---AIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIE 404
Query: 254 VCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC 313
E M+ G PD +++ CK GK A + K P +I L
Sbjct: 405 YLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLT 464
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
+ +T + A+++L++ + K I +S+++R L R V A + M P
Sbjct: 465 KVGKT-EYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSA 523
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
+N+++ KA + A++ L M +G KP TYT L+ G A+
Sbjct: 524 VTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGIAD 570
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 43/213 (20%)
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
+R L R ++ L +MI +G P S+I + ++G A +++++ + G
Sbjct: 113 LRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGA 172
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYC---KLEEF 459
PDV TY L+ GY G++++A E+L ++P VTY+T++R C KL+E
Sbjct: 173 VPDVITYNVLIGGYCKSGEIDKALEVLERMS-----VAPDVVTYNTILRSLCDSGKLKEA 227
Query: 460 ----------DC----------------------ALKLLNEMKDVGVQPNVDEYNKLIQS 487
+C A+KLL+EM+ G +P+V YN LI
Sbjct: 228 MEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLING 287
Query: 488 LCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
+C K A K L +M G N IT +I
Sbjct: 288 IC-KEGRLDEAIKFLNNMPSYGCKPNVITHNII 319
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 134/290 (46%), Gaps = 2/290 (0%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
GC + TY I L ++ A + +M G P+ +I FCK G+ +EA
Sbjct: 9 GCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEA 68
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
V K + LIS+LC+ DE V+ AL+M D S + K I F+S+I
Sbjct: 69 RNVLDEMSGKGLALNAVGYNCLISALCK-DEKVQDALNMFGDMSSKGCKPDIFTFNSLIF 127
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
LC++ A L M+ EG +N++I A+ + G M A++++ M RG
Sbjct: 128 GLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPL 187
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
D TY GL+ G +E+ + + + ++ + LI G C+ AL+ L
Sbjct: 188 DDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFL 247
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+M G+ P++ YN LI LC K + A L + ++++G+ + IT
Sbjct: 248 RDMIHRGLTPDIVTYNSLINGLC-KTGRAQEALNLFDKLQVEGICPDAIT 296
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 131/296 (44%), Gaps = 22/296 (7%)
Query: 191 EKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDW 250
E V+T IL I F K G+ + A V ++ G N Y I AL + +
Sbjct: 46 EPNVITYTIL---IDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQD 102
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A ++ M G PD +I CK K +EA +Y + + LI
Sbjct: 103 ALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIH 162
Query: 311 SLCQE---DETVKLALDML------DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLL 361
+ + E +KL DML DD + ++ +I++LCR ++ L
Sbjct: 163 AFLRRGAMQEALKLVNDMLFRGCPLDDIT----------YNGLIKALCRAGNIEKGLALF 212
Query: 362 SKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG 421
M+S+G P N N +I+ + G++ A+E L+ M RGL PD+ TY L++G
Sbjct: 213 EDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKT 272
Query: 422 GQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
G+ +EA + ++ + +TY+TLI +CK FD A LL+ D G PN
Sbjct: 273 GRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPN 328
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 85/160 (53%), Gaps = 2/160 (1%)
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
M+S G P +N++I K G + A E++ M+ +G +P+V TYT L+ + G+
Sbjct: 5 MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 64
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
+EEA +L+E L+ V Y+ LI CK E+ AL + +M G +P++ +N
Sbjct: 65 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 124
Query: 484 LIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRA 522
LI LC K + A L +DM L+G+ N IT LI A
Sbjct: 125 LIFGLC-KVNKFEEALGLYQDMLLEGVIANTITYNTLIHA 163
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 105/254 (41%), Gaps = 4/254 (1%)
Query: 205 ALFSKLGKGKAAFEVFNKFGDY---GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET 261
L S L K + + N FGD GC + T+ I L + F+ A + + M+
Sbjct: 89 CLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLE 148
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
G + ++ +I F + G +EA + + LI +LC+ K
Sbjct: 149 GVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEK- 207
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
L + +D + + +I LCR ++ A L MI G P +NS+I+
Sbjct: 208 GLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLIN 267
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
K G A+ + ++ G+ PD TY L+S + G ++A +L+ +
Sbjct: 268 GLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIP 327
Query: 442 SPVTYHTLIRGYCK 455
+ VT++ L+ + K
Sbjct: 328 NEVTWYILVSNFIK 341
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 78/188 (41%), Gaps = 1/188 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI F + G + A ++ N GC + TY I+AL R + ++ E M+
Sbjct: 158 NTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMS 217
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P++ +I+ C+ G + A + + P LI+ LC+ +
Sbjct: 218 KGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQE 277
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
AL++ D E ++++I C+ A LLS+ + G P + ++
Sbjct: 278 -ALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILV 336
Query: 381 SAYSKAGD 388
S + K GD
Sbjct: 337 SNFIKEGD 344
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 65/156 (41%), Gaps = 4/156 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+KA+C + ++ AL++ + G + N LI + G + A E
Sbjct: 193 NGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISC----NILINGLCRTGNIQHALEFLR 248
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G + TY I L + A ++ +K+ G PD+ +ISW CK G
Sbjct: 249 DMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEG 308
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
+AH++ + + P + L+S+ +E +
Sbjct: 309 MFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 344
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 158/346 (45%), Gaps = 10/346 (2%)
Query: 167 AICSSVGKKEVYALWDIVKEIGEKEKGVLTVEIL--NELIALFSKLGKGKAAFEVFNKFG 224
A C G K+ L D +++ G T +I+ N ++ + G+ A E
Sbjct: 1 ATCKRSGYKQAMKLLDEMRDKG------CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLP 54
Query: 225 DYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAK 284
YGC N +Y ++ L + ++ A + +M + G P+ +IS+ C+ G +
Sbjct: 55 SYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVE 114
Query: 285 EAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSV 344
A V + P L+ + C++ + K A+ LD I ++++
Sbjct: 115 PALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDK-AMAFLDLMVSRGCYPDIVSYNTL 173
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
+ +LCR +V A LL ++ +G P +N+VI +KAG A+E+L M S+GL
Sbjct: 174 LTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGL 233
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
+PD+ TY+ + +G ++E+A + + R + V Y+ +I G CK E A+
Sbjct: 234 QPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAID 293
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
L M G PN Y LI+ L + L + A LL+++ +G+
Sbjct: 294 LFAYMIGNGCMPNESTYTILIEGLAYEGL-IKEARDLLDELCSRGV 338
>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 783
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 144/343 (41%), Gaps = 35/343 (10%)
Query: 181 WDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIE 240
W +++E+ + + E + LI +S+ G + A E F D+ C + + +
Sbjct: 113 WKVLQELKNSAIKI-SSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILH 171
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP 300
L R++ F A +V +M++ PD G +I CK K ++A V++ ++ + P
Sbjct: 172 FLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILP 231
Query: 301 PQSVVAFLISSLCQEDETVKL----------------------------------ALDML 326
Q + + ++S LCQ + A +L
Sbjct: 232 NQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLL 291
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
+ + + + +I L R + A KM+ E P ++ +I S+
Sbjct: 292 QLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQE 351
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
G +T A+ +L M RGL+PD Y L+ G+ + G ++EA + E K+ + TY
Sbjct: 352 GRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTY 411
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
LI G CK + A + EM+ +G P+V +N LI LC
Sbjct: 412 SILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLC 454
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 105/263 (39%), Gaps = 23/263 (8%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI F +G A + + + C N TY I + + + + A + ++M +
Sbjct: 377 NALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEK 436
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G LP +I+ CK + +EA +++ + E V+
Sbjct: 437 LGCLPSVVTFNSLINGLCKANRLEEARLLF-----------------------YQMEIVR 473
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
L G + + I ++ LC + A LL +++ G P +N +I
Sbjct: 474 KPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILI 533
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ + K G++ A ++ K M+ +G PD TY L+ G G+ E+A EI + K
Sbjct: 534 NGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCV 593
Query: 441 LSPVTYHTLIRGYCKLEEFDCAL 463
TY T++ C+ AL
Sbjct: 594 PESSTYKTIMTWSCRENNISLAL 616
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 109/268 (40%), Gaps = 14/268 (5%)
Query: 235 YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR 294
Y I LS+ A ++ +M E G PD+ +I FC G EA +
Sbjct: 341 YTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEIS 400
Query: 295 EKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDV 354
+ +P + LI +C+ + + A + + ++ F+S+I LC+ +
Sbjct: 401 KHDCFPNNHTYSILICGMCK-NGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRL 459
Query: 355 HGAKTLLSKM-----------ISEGPPP--GNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
A+ L +M +S+G A ++ ++G + A ++L +
Sbjct: 460 EEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVD 519
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+ PD+ TY L++G+ G + A ++ E + VTY TLI G + +
Sbjct: 520 SGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNED 579
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
AL++ +M G P Y ++ C
Sbjct: 580 ALEIFEQMVKKGCVPESSTYKTIMTWSC 607
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 191 EKGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
+ GVL + N LI F K G AF++F + G + + TY I+ L R +
Sbjct: 519 DSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNE 578
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
A + E+M++ G +P+S I++W C+
Sbjct: 579 DALEIFEQMVKKGCVPESSTYKTIMTWSCR 608
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 56/120 (46%), Gaps = 5/120 (4%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A+++ + D G + + TY I + + A+ + ++M G +PDS G +I
Sbjct: 510 AYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLID 569
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDM----LDDFSG 331
+ G+ ++A ++ +K P S +++ C+E+ + LAL + L DF G
Sbjct: 570 GLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCREN-NISLALSVWMKYLRDFRG 628
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 138/312 (44%), Gaps = 7/312 (2%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N I SKLG A +V+N+ + V ++ T+ I + F+ A ++ E+M+
Sbjct: 535 FNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMV 594
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
PD G +I CK G+ + A + L + P L+ LC+ +
Sbjct: 595 AKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGR-I 653
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
+ A L++ + S++ +LCR A L+S++ S G P +N +
Sbjct: 654 EEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNIL 713
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+ K+G A+ +L+ M +G PDV TY L+ G +EEA + + S
Sbjct: 714 VDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVS 773
Query: 440 RL---SPVTYHTLIRGYCKLEEFDCALKLLNEM--KDVGVQPNVDEYNKLIQSLCLKALD 494
R + VTY LI G CK+ D A +L+ EM K V PN+ YN + LC +++
Sbjct: 774 RCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMM 833
Query: 495 WRTAEKLLEDMR 506
E L+ +R
Sbjct: 834 AEACE-LMRSLR 844
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 182/418 (43%), Gaps = 29/418 (6%)
Query: 110 LLQSSVDGYLESSLDSFELDLHEDFVLKVLETPLVLGENLVCFFKWVTSGVV------DA 163
L++S DG L S D+ D + K + + E F + G V +A
Sbjct: 345 LMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQ----IDEACSVFDDMIAGGYVPNVITYNA 400
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
L+ +C + + +A+ + + + G V+T +L + F K + A E+ +
Sbjct: 401 LVNGLCKADKMERAHAMIESMVDKGVTPD-VITYSVL---VDAFCKASRVDEALELLHGM 456
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM-IETGSLPDSEKVGKIISWFCKGGK 282
GC N T+ I+ L + A+ + + M ++ G +PD +I + G+
Sbjct: 457 ASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGR 516
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP-- 340
A +A + + Y + L S L +++ ML+ + P
Sbjct: 517 AGQAEALLDAMPDPDTYAFNCCINGL-SKLGDVSRALQVYNRMLE--------LELVPDK 567
Query: 341 --FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
F+ +I C+ + A L +M+++ P F ++I KAG + A ++L L
Sbjct: 568 VTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDL 627
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M + G+ P+V TY L+ G G++EEAC+ L E + +TY +L+ C+
Sbjct: 628 MGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASR 687
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
D AL+L++E+K G P+ YN L+ L K+ A +LE+M KG H + +T
Sbjct: 688 TDDALQLVSELKSFGWDPDTVTYNILVDGL-WKSGQTEQAITVLEEMVGKGHHPDVVT 744
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 156/356 (43%), Gaps = 15/356 (4%)
Query: 154 KWVTSGVV--DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVL-TVEILNELIALFSKL 210
K VT V+ L+ A C + E L G +G V N +I K
Sbjct: 424 KGVTPDVITYSVLVDAFCKASRVDEALELLH-----GMASRGCTPNVVTFNSIIDGLCKS 478
Query: 211 GKGKAAFEVFNKFG-DYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEK 269
+ AF++F+ +G V ++ TY I+ L R A ++ + M + PD+
Sbjct: 479 DRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPD----PDTYA 534
Query: 270 VGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDF 329
I+ K G A VY E ++ P + LI+ C+ + A + ++
Sbjct: 535 FNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGN-FEQASALFEEM 593
Query: 330 SGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
+ + + F ++I LC+ V A+ +L M + G PP +N+++ K+G +
Sbjct: 594 VAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRI 653
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
A + L+ M S G PD TY L+ + ++A ++++E K VTY+ L
Sbjct: 654 EEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNIL 713
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
+ G K + + A+ +L EM G P+V YN LI SLC KA D A +L DM
Sbjct: 714 VDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLC-KAGDLEEARRLHGDM 768
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 168/397 (42%), Gaps = 49/397 (12%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+ +C + + + D++ +G V N L+ K G+ + A + +
Sbjct: 607 ALIDGLCKAGQVEAARDILDLMGNLGVPPN----VVTYNALVHGLCKSGRIEEACQFLEE 662
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
GCV + TY + AL R D A + ++ G PD+ ++ K G+
Sbjct: 663 MVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQ 722
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK--- 339
++A V K +P LI SLC+ + ++ A + D S + +
Sbjct: 723 TEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGD-LEEARRLHGDMSSRVSRCCVPNVV 781
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPP--PGNAVFNSVISAYSKAGDMTPAMEMLK 397
+S +I LC++ + A+ L+ +M+ + P +NS + K M A E+++
Sbjct: 782 TYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMR 841
Query: 398 LMRSRGLK--PDVYTYTGLMSGYANGGQMEEACEILNEA--------------------- 434
+R L+ PD T++ L+ G GQ +EAC + ++
Sbjct: 842 SLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCK 901
Query: 435 ----KKNHSRL--------SP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
++ H+ + +P +TY L+ +CK D AL+LL+ M G PNV
Sbjct: 902 TDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVT 961
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLK-GLHLNGIT 516
+N +I LC K+ A ++ +DM LK GL + IT
Sbjct: 962 FNSIIDGLC-KSDQSGEAFQMFDDMTLKHGLAPDKIT 997
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 116/257 (45%), Gaps = 48/257 (18%)
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLS 362
++ SLC+ ET + L+ F GE + + P ++++I LC+ ++ L
Sbjct: 185 IVLQSLCRAGETAR----ALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFE 240
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG 422
+++ G P +N++I + KAGD+ A + M SR P+V TY+ L++G G
Sbjct: 241 ELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVG 300
Query: 423 QME-------------------------------------EACEILNEAKKNHSRLSP-- 443
+++ EACE++ + R+SP
Sbjct: 301 RIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDT 360
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
VT+ TLI G CK + D A + ++M G PNV YN L+ LC KA A ++E
Sbjct: 361 VTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLC-KADKMERAHAMIE 419
Query: 504 DMRLKGLHLNGITRALI 520
M KG+ + IT +++
Sbjct: 420 SMVDKGVTPDVITYSVL 436
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 138/329 (41%), Gaps = 22/329 (6%)
Query: 201 NELIALFSKLGKGKAAFEVF-NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N ++ + G+ A E+F + G TY I L + + E+++
Sbjct: 184 NIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELV 243
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---D 316
E G PD +I CK G +EA ++ + P + LI+ LC+ D
Sbjct: 244 ERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRID 303
Query: 317 ETVKLALDMLDDFSGEARKYA-----IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP-- 369
E +L +M RK I ++S + LC+ A L+ + + +G
Sbjct: 304 EARELIQEM-------TRKSCDVLPNIITYNSFLDGLCKQSMTAEACELM-RSLRDGSLR 355
Query: 370 -PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P F+++I K G + A + M + G P+V TY L++G +ME A
Sbjct: 356 VSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAH 415
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
++ +TY L+ +CK D AL+LL+ M G PNV +N +I L
Sbjct: 416 AMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGL 475
Query: 489 CLKALDWRTAEKLLEDMRLK-GLHLNGIT 516
C K+ A ++ +DM LK GL + IT
Sbjct: 476 C-KSDRSGEAFQMFDDMALKHGLVPDKIT 503
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 115/263 (43%), Gaps = 21/263 (7%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
+ LI K G+ A VF+ G V N TY + L + + A ++ E M+
Sbjct: 857 FSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMV 916
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDE 317
+ G PD ++ FCK EA + + P +VV F +I LC+ D+
Sbjct: 917 DKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTP--NVVTFNSIIDGLCKSDQ 974
Query: 318 TVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
+ + A M DD + K+ + P + ++I L R A+ LL M P P
Sbjct: 975 SGE-AFQMFDDMT---LKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAM----PDPDT 1026
Query: 374 AVFNSVISAYSKAGDMTPAME-MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
FN I+ SK GD++ A+ ML+L L PD T+ L++G G E+A +
Sbjct: 1027 YAFNCCINGLSKLGDVSRALHRMLELE----LVPDKVTFNILIAGACKAGNFEQASALFE 1082
Query: 433 EAKKNHSRLSPVTYHTLIRGYCK 455
E + + +T+ LI G CK
Sbjct: 1083 EMVAKNLQPDVMTFGALIDGLCK 1105
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 162/388 (41%), Gaps = 65/388 (16%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
L+ + + A ++ ++ +G + TY ++ L + + A +V E+M+ G
Sbjct: 678 LVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKG 737
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVY--TLAREKKMYPPQSVV-AFLISSLCQE---D 316
PD +I CK G +EA ++ +R + P V + LI+ LC+ D
Sbjct: 738 HHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRID 797
Query: 317 ETVKLALDM-----------------LDDFSGEAR--------------KYAIKP----F 341
E +L +M LD ++ + P F
Sbjct: 798 EARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTF 857
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
S++I LC+ A + MI+ G P +N +++ K M A M++ M
Sbjct: 858 STLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVD 917
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
+G+ PDV TY+ L+ + ++EA E+L+ + VT++++I G CK ++
Sbjct: 918 KGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGE 977
Query: 462 ALKLLNEMK-DVGVQPNVDEYNKLIQSLCLKALDWRT-----AEKLLEDMR--------- 506
A ++ ++M G+ P+ Y LI L +RT AE LL+ M
Sbjct: 978 AFQMFDDMTLKHGLAPDKITYCTLIDGL------FRTGWAGQAEVLLDAMPDPDTYAFNC 1031
Query: 507 -LKGL-HLNGITRALIRAVK-ELEEDAI 531
+ GL L ++RAL R ++ EL D +
Sbjct: 1032 CINGLSKLGDVSRALHRMLELELVPDKV 1059
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 130/324 (40%), Gaps = 42/324 (12%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGC--VANQETYYFTIEALSRRKIFDWAWSVCEKM-- 258
LI K+G+ A E+ + C + N TY ++ L ++ + A CE M
Sbjct: 786 LINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEA---CELMRS 842
Query: 259 IETGSL---PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+ GSL PD+ +I CK G+ EA V+ P L++ LC+
Sbjct: 843 LRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKT 902
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
D+ ++ A M++ + + +S ++ + C+ V A LL M S G P
Sbjct: 903 DK-MERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVT 961
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMR-SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
FNS+I K+ A +M M GL PD TY L+ G G +A E+L +A
Sbjct: 962 FNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQA-EVLLDA 1020
Query: 435 KKN-----------------------HSRL------SPVTYHTLIRGYCKLEEFDCALKL 465
+ H L VT++ LI G CK F+ A L
Sbjct: 1021 MPDPDTYAFNCCINGLSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASAL 1080
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLC 489
EM +QP+V + LI LC
Sbjct: 1081 FEEMVAKNLQPDVMTFGALIDGLC 1104
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 77/180 (42%), Gaps = 36/180 (20%)
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM-SGYANGGQME--------- 425
FN ++ K+G A+++ + +P+ +TY+ L+ + Y GG +E
Sbjct: 114 FNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERTLGFFRRI 173
Query: 426 ------------------------EACEIL-NEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
A EI E ++ + VTY+T+I G CK E
Sbjct: 174 RSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELG 233
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
++L E+ + G P+V YN LI SLC KA D A +L DM + N +T +++
Sbjct: 234 AGMELFEELVERGHHPDVVTYNTLIDSLC-KAGDLEEARRLHGDMSSRSCVPNVVTYSVL 292
>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
Length = 796
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 153/336 (45%), Gaps = 6/336 (1%)
Query: 186 EIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRR 245
+I E E V+T N LI + L + + A E+ + GC ++ +YY + L +
Sbjct: 294 QIVEIEPNVITY---NCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKE 350
Query: 246 KIFDWAWSVCEKMI-ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSV 304
K + EKM+ ++ LPD + K G EA A E++ +
Sbjct: 351 KRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVG 410
Query: 305 VAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM 364
+ ++ S C+E K A +++++ + + ++SVI LC+ + V AK +L +M
Sbjct: 411 YSAIVHSFCREGRMDK-AKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQM 469
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
G P + ++++ K G+ A EM+ + P+ TY+ LM G+ G+
Sbjct: 470 YKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKS 529
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
EAC+++ E K +PV + LI+ C+ E+ D A + + + + G NV + +
Sbjct: 530 SEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTV 589
Query: 485 IQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
I C K D A LL+DM L H + +T I
Sbjct: 590 IHGFCQKD-DLEAALSLLDDMYLSNKHPDVVTYTTI 624
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 136/287 (47%), Gaps = 3/287 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
++ F + G+ A E+ N+ GC+ + TY I L + + D A + +M + G
Sbjct: 414 IVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHG 473
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P++ +++ CK G + EA + ++ E P + L+ +E ++ + A
Sbjct: 474 CKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSE-A 532
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
D++ + + + +I+SLC+ + V AK + + ++ G F +VI
Sbjct: 533 CDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHG 592
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ + D+ A+ +L M PDV TYT ++ G++EEA ++ + + +
Sbjct: 593 FCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPT 652
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
PVTY T+I YC++ + LKLL +M + Q YN++I+ LC
Sbjct: 653 PVTYRTVIHQYCRMGRVEDLLKLLEKM--LSRQECRTAYNQVIEKLC 697
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 68/132 (51%), Gaps = 8/132 (6%)
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
F V+ +YS+AG + AM +L +M+ G++PD+ + G ++++A L +
Sbjct: 235 FGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQ 294
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+ +TY+ LI+GYC L + A++L+ EM G P+ Y ++ LC
Sbjct: 295 IVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLC------ 348
Query: 496 RTAEKLLEDMRL 507
EK ++++RL
Sbjct: 349 --KEKRIKEVRL 358
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 83/192 (43%), Gaps = 7/192 (3%)
Query: 301 PQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK---PFSSVIRSLCRMKDVHGA 357
P+ V A L Q DE V L D R I+ F V+ S R + A
Sbjct: 195 PRQVCAVL---QLQTDERVALRFFYWADRQWRYRHDPIRRPEAFGYVMVSYSRAGKLRNA 251
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
+L+ M G P ++ N+ I + A+ L+ M+ ++P+V TY L+ G
Sbjct: 252 MRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKG 311
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM-KDVGVQP 476
Y + ++E+A E++ E ++Y+T++ CK + L+ +M KD + P
Sbjct: 312 YCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLP 371
Query: 477 NVDEYNKLIQSL 488
+ YN + L
Sbjct: 372 DQVTYNTFVHML 383
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 139/308 (45%), Gaps = 3/308 (0%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A +FN+ G A+ Y I L +D + +MI +P+ +I
Sbjct: 263 ALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALID 322
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
F K GK EA +Y + + P + LI C+E+ + A MLD + +
Sbjct: 323 VFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGE-ANQMLDLMVSKGCE 381
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
I +S +I S C+ K V L ++ S+G +N+++ + ++G + A E+
Sbjct: 382 PNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKEL 441
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
+ M SRG+ P V TY L+ G + G++++A EI + +K+ L Y+ +I G C
Sbjct: 442 FQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCN 501
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
+ D A L + GV+P+V YN +I LC K A+ L M+ G +
Sbjct: 502 ASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKG-SLSEADMLFRKMKEDGCAPSDC 560
Query: 516 T-RALIRA 522
T LIRA
Sbjct: 561 TYNILIRA 568
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 145/330 (43%), Gaps = 11/330 (3%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
L+ C E AL D + E+ + V+TV N LI G+ A + ++
Sbjct: 144 TLINGFCLEGRVSEAVALVDRMVEM-KYRPNVVTV---NTLINGLCLKGRVTEALVLIDR 199
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
YGC AN+ TY + + + A + KM E + +I CK G
Sbjct: 200 MVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGN 259
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIK 339
+A ++ K + + +I LC + D+ K ML + G +
Sbjct: 260 LDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAK----MLREMIGRNIIPNVV 315
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
FS++I + + AK L ++M++ G P ++S+I + K + A +ML LM
Sbjct: 316 TFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLM 375
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
S+G +P++ TY+ L++ Y +++ + E VTY+TL++G+C+ +
Sbjct: 376 VSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKL 435
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ A +L EM GV P+V Y L+ LC
Sbjct: 436 NVAKELFQEMVSRGVPPSVVTYGILLDGLC 465
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 151/356 (42%), Gaps = 37/356 (10%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
+N +I F + K AF V + +G N T+ I A ++ ++M+
Sbjct: 107 MNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMV 166
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVV------YTLAREKKMYPP------------ 301
E P+ V +I+ C G+ EA V+ Y + Y P
Sbjct: 167 EMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTA 226
Query: 302 ---------------QSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSV 344
SVV + +I SLC+ D + AL + ++ + K + +SS+
Sbjct: 227 LALDLFRKMEERSIKASVVQYSIVIDSLCK-DGNLDDALSLFNEMEMKGIKADVVAYSSI 285
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
I LC +L +MI P F+++I + K G + A E+ M +RG+
Sbjct: 286 IGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGI 345
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
PD TY+ L+ G+ ++ EA ++L+ + VTY LI YCK + D ++
Sbjct: 346 APDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMR 405
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
L E+ G+ + YN L+Q C ++ A++L ++M +G+ + +T ++
Sbjct: 406 LFCEISSKGLVADTVTYNTLVQGFC-QSGKLNVAKELFQEMVSRGVPPSVVTYGIL 460
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 138/320 (43%), Gaps = 35/320 (10%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
N T I R++ +A+SV + ++ G P++ +I+ FC G+ EA +
Sbjct: 103 NMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALV 162
Query: 291 TLAREKKMYPPQSVVAFLISSLCQE----------DETVK-------------------- 320
E K P V LI+ LC + D VK
Sbjct: 163 DRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKS 222
Query: 321 ----LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
LALD+ + K ++ +S VI SLC+ ++ A +L ++M +G +
Sbjct: 223 GNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAY 282
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
+S+I G +ML+ M R + P+V T++ L+ + G++ EA E+ NE
Sbjct: 283 SSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVA 342
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+TY +LI G+CK A ++L+ M G +PN+ Y+ LI S C KA
Sbjct: 343 RGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYC-KAKRVD 401
Query: 497 TAEKLLEDMRLKGLHLNGIT 516
+L ++ KGL + +T
Sbjct: 402 NGMRLFCEISSKGLVADTVT 421
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 123/276 (44%), Gaps = 2/276 (0%)
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP 300
A++RRK +D C++M G + + +I+ FC+ K A V A + P
Sbjct: 78 AVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEP 137
Query: 301 PQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTL 360
+ LI+ C E V A+ ++D + + +++I LC V A L
Sbjct: 138 NTITFSTLINGFCLEGR-VSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVL 196
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
+ +M+ G + V++ K+G+ A+++ + M R +K V Y+ ++
Sbjct: 197 IDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCK 256
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
G +++A + NE + + V Y ++I G C +D K+L EM + PNV
Sbjct: 257 DGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVT 316
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++ LI +K A++L +M +G+ + IT
Sbjct: 317 FSALIDVF-VKEGKLLEAKELYNEMVARGIAPDTIT 351
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 115/280 (41%), Gaps = 36/280 (12%)
Query: 229 VANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHV 288
+ N T+ I+ + A + +M+ G PD+ +I FCK + EA+
Sbjct: 311 IPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQ 370
Query: 289 VYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSL 348
+ L K P + LI+S C+ + V + + + S + ++++++
Sbjct: 371 MLDLMVSKGCEPNIVTYSILINSYCKA-KRVDNGMRLFCEISSKGLVADTVTYNTLVQGF 429
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML-KLMRSR----- 402
C+ ++ AK L +M+S G PP + ++ G++ A+E+ K+ +SR
Sbjct: 430 CQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGI 489
Query: 403 -----------------------------GLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
G+KPDV TY ++ G G + EA + +
Sbjct: 490 GIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRK 549
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
K++ S TY+ LIR + +++L+ EMK G
Sbjct: 550 MKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRG 589
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 5/165 (3%)
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
V+ A L MI P P F+ + SA ++ + + K M G++ ++YT
Sbjct: 50 VNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNI 109
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
+++ + ++ A ++ A K + +T+ TLI G+C A+ L++ M ++
Sbjct: 110 MINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMK 169
Query: 474 VQPNVDEYNKLIQSLCLKALDWRTAEK--LLEDMRLKGLHLNGIT 516
+PNV N LI LCLK R E L++ M G N IT
Sbjct: 170 YRPNVVTVNTLINGLCLKG---RVTEALVLIDRMVKYGCEANEIT 211
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 75/174 (43%)
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
D V A+D+ + ++ FS + ++ R K+ +M G
Sbjct: 47 DIKVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYT 106
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
N +I+ + + + A ++ G +P+ T++ L++G+ G++ EA +++
Sbjct: 107 MNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMV 166
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ R + VT +TLI G C AL L++ M G + N Y ++ +C
Sbjct: 167 EMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMC 220
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 158/354 (44%), Gaps = 43/354 (12%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEIL--NELIALFSKLGKGKAAFEV 219
+ LLK++C+ + L ++ E G V + +++ N +I F K G A ++
Sbjct: 188 NILLKSLCNQGKSGQADDLLRMMAEGGT----VCSPDVVAYNTVIDGFFKEGDVNKACDL 243
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
F + G + TY + AL + + D A + +M+ G LPD+ +I +
Sbjct: 244 FKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSS 303
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
G+ KEA V+ R + + P VVA
Sbjct: 304 TGQWKEAVRVFKEMRRQSILP--DVVAL-------------------------------- 329
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
++++ SLC+ + A+ + M +G P + +++ Y+ G + ++ LM
Sbjct: 330 --NTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLM 387
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
G+ PD+YT+ L+ YAN G +++A I NE + + + VTY T+I C++ +
Sbjct: 388 LGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKM 447
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
D A++ N+M D GV P+ Y+ LIQ C A++L+ ++ G+ L+
Sbjct: 448 DDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHG-SLLKAKELISEIMNNGMRLD 500
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 143/327 (43%), Gaps = 8/327 (2%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V LN L+ K GK K A +VF+ G + +Y + + + + +
Sbjct: 326 VVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFD 385
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ-- 314
M+ G PD +I + G +A +++ R+ + P +I++LC+
Sbjct: 386 LMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIG 445
Query: 315 -EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
D+ ++ M+D KYA + +I+ C + AK L+S++++ G
Sbjct: 446 KMDDAMEKFNQMIDQ-GVVPDKYA---YHCLIQGFCTHGSLLKAKELISEIMNNGMRLDI 501
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
F S+I+ K G + A + L + GL PD Y LM GY G+ME+A + +
Sbjct: 502 VFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDA 561
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
+ V Y TL+ GYCK+ D L L EM G++P+ YN +I L +A
Sbjct: 562 MVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL-FEAG 620
Query: 494 DWRTAEKLLEDMRLKGLHLNGITRALI 520
A+ +M G+ +N T +++
Sbjct: 621 RTVPAKVKFHEMTESGIAMNKCTYSIV 647
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 118/262 (45%), Gaps = 4/262 (1%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA-HVVYTL 292
TY ++ +R + A + +++ TG D+ ++ FC+ + EA ++
Sbjct: 115 TYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHR 174
Query: 293 AREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS--GEARKYAIKPFSSVIRSLCR 350
E P L+ SLC + ++ + A D+L + G + +++VI +
Sbjct: 175 TPELGCVPDVFSYNILLKSLCNQGKSGQ-ADDLLRMMAEGGTVCSPDVVAYNTVIDGFFK 233
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
DV+ A L +M+ G PP ++SV+ A KA M A L+ M ++G+ PD +T
Sbjct: 234 EGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWT 293
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
Y L+ GY++ GQ +EA + E ++ V +TL+ CK + A + + M
Sbjct: 294 YNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMA 353
Query: 471 DVGVQPNVDEYNKLIQSLCLKA 492
G P+V Y ++ K
Sbjct: 354 MKGQNPDVFSYTIMLNGYATKG 375
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 123/292 (42%), Gaps = 1/292 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+ N LI ++ G A +FN+ D+G + TY I AL R D A
Sbjct: 396 IYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFN 455
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+MI+ G +PD +I FC G +A + + M +I++LC+
Sbjct: 456 QMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLG 515
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ A ++ D ++ ++ C + + A + M+S G P +
Sbjct: 516 RVMD-AQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGY 574
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
++++ Y K G + + + + M +G+KP Y ++ G G+ A +E +
Sbjct: 575 GTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTE 634
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ ++ TY ++RG K FD A+ L E++ + V+ ++ N +I +
Sbjct: 635 SGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGM 686
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/321 (19%), Positives = 127/321 (39%), Gaps = 36/321 (11%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+IA ++GK A E FN+ D G V ++ Y+ I+ A + +++ G
Sbjct: 437 VIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNG 496
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
D G II+ CK G+ +A ++ L ++P V L+ C + K A
Sbjct: 497 MRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEK-A 555
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
L + D + + + +++ C++ + +L +M+ +G P ++N +I
Sbjct: 556 LRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDG 615
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+AG PA M G+ + TY+ ++ G +EA + E + + ++
Sbjct: 616 LFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKID 675
Query: 443 PVTYHTLIRGYCKLEEFD----------------CALK-------------------LLN 467
+T +T+I G + + CA+ + +
Sbjct: 676 IITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFS 735
Query: 468 EMKDVGVQPNVDEYNKLIQSL 488
M++ G +P+ N +++ L
Sbjct: 736 SMQNAGCEPDSRLLNHVVREL 756
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 13/146 (8%)
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT-----PAMEMLKLMRS-------RGL 404
A LL ++ G P + N ++A ++A PA+ + R+ R L
Sbjct: 50 AHDLLDELQRRGTPVLDRDLNGFLAALARAPSSAACGSGPALAVALFNRAASRAQGPRVL 109
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
P YTY LM + E A + + R+ + L++G+C+ + D AL
Sbjct: 110 SPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALD 169
Query: 465 -LLNEMKDVGVQPNVDEYNKLIQSLC 489
LL+ ++G P+V YN L++SLC
Sbjct: 170 ILLHRTPELGCVPDVFSYNILLKSLC 195
>gi|224113637|ref|XP_002316529.1| predicted protein [Populus trichocarpa]
gi|222859594|gb|EEE97141.1| predicted protein [Populus trichocarpa]
Length = 678
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 152/321 (47%), Gaps = 4/321 (1%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI F K+G A E+ N+ N TY IE SR + A +C++M+E
Sbjct: 315 NSLIDGFCKIGGITVAEELRNEMMKIDIEPNVRTYATMIEGYSRAGCLEEALRLCDEMVE 374
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G LP+S I+ W G A +V+T +K++ + + L LC+ + +
Sbjct: 375 RGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLCR-NGYIT 433
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
AL L+ + +I LC+ + A+ LL++M G P F ++I
Sbjct: 434 TALKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLI 493
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ K G++ A+++ M KP++ Y +++G G ++ A +++ ++
Sbjct: 494 DGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLVDVARSLVDVLQR-MGL 552
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+ +TY+TLI GY +FD A KL M++ G+ + YN +I+ LC K + A++
Sbjct: 553 VDTITYNTLINGYFNCGKFDKAFKLSTLMQNAGILASSATYNTVIKFLC-KFGCVQEAKE 611
Query: 501 LLEDMRLKGLHLNGIT-RALI 520
L+ M L G+ + IT R L+
Sbjct: 612 LMTMMVLWGVLPDNITYRTLV 632
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 136/315 (43%), Gaps = 5/315 (1%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+ + L+ +++G A EV K GC + + L + W V ++M
Sbjct: 170 VFDALVRACTQIGATVGACEVIKKLQIEGCWVTIHAWNNFLSHLIKVNEIHRFWIVYKEM 229
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE--- 315
+ G + + ++ CK K +EA V+ + ++P ++ C+
Sbjct: 230 VSYGYMENVNTFNVVVHALCKDCKLQEALSVFYRILKSGIWPNVVTFNMMVDGACKMGDM 289
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
D +KL M +G + ++ ++S+I C++ + A+ L ++M+ P
Sbjct: 290 DLALKLVRKMEIMSAGSIKPNSV-TYNSLIDGFCKIGGITVAEELRNEMMKIDIEPNVRT 348
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+ ++I YS+AG + A+ + M RGL P+ Y +M G ++ A + +
Sbjct: 349 YATMIEGYSRAGCLEEALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMS 408
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
L T L RG C+ ALK LN++ + + + +N LI LC K+ ++
Sbjct: 409 DKQIPLDKFTCSILTRGLCRNGYITTALKFLNQVLENNLIEDAFSHNILINFLC-KSNNF 467
Query: 496 RTAEKLLEDMRLKGL 510
A +LL M ++GL
Sbjct: 468 AAARQLLARMYVRGL 482
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 148/341 (43%), Gaps = 22/341 (6%)
Query: 159 GVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFE 218
V DAL++A C+ +G +++K++ + E +T+ N ++ K+ + +
Sbjct: 169 AVFDALVRA-CTQIGAT--VGACEVIKKL-QIEGCWVTIHAWNNFLSHLIKVNEIHRFWI 224
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
V+ + YG + N T+ + AL + A SV +++++G P+ ++ C
Sbjct: 225 VYKEMVSYGYMENVNTFNVVVHALCKDCKLQEALSVFYRILKSGIWPNVVTFNMMVDGAC 284
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSV----VAF--LISSLCQEDETVKLALDMLDDFSGE 332
K G A L R+ ++ S+ V + LI C+ + + ++ E
Sbjct: 285 KMGDMDLA---LKLVRKMEIMSAGSIKPNSVTYNSLIDGFCKIG-----GITVAEELRNE 336
Query: 333 ARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD 388
K I+P ++++I R + A L +M+ G P + V+NS++ GD
Sbjct: 337 MMKIDIEPNVRTYATMIEGYSRAGCLEEALRLCDEMVERGLLPNSVVYNSIMHWLYMEGD 396
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHT 448
+ A + M + + D +T + L G G + A + LN+ +N+ +++
Sbjct: 397 VDGASLVFTDMSDKQIPLDKFTCSILTRGLCRNGYITTALKFLNQVLENNLIEDAFSHNI 456
Query: 449 LIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
LI CK F A +LL M G+ P+V + LI C
Sbjct: 457 LINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHC 497
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 113/299 (37%), Gaps = 38/299 (12%)
Query: 191 EKGVLTVEIL-NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
E+G+L ++ N ++ G A VF D ++ T L R
Sbjct: 374 ERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLCRNGYIT 433
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A +++E + D+ +I++ CK A + + + P
Sbjct: 434 TALKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLVPD-------- 485
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
+ F ++I C+ ++ A + KM+
Sbjct: 486 ----------------------------VVTFGTLIDGHCKEGNIESAVQVYDKMVKGEE 517
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
P V+NS+I+ K G + A ++ +++ GL D TY L++GY N G+ ++A +
Sbjct: 518 KPNLLVYNSIINGLCKDGLVDVARSLVDVLQRMGL-VDTITYNTLINGYFNCGKFDKAFK 576
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ + S TY+T+I+ CK A +L+ M GV P+ Y L+ ++
Sbjct: 577 LSTLMQNAGILASSATYNTVIKFLCKFGCVQEAKELMTMMVLWGVLPDNITYRTLVINI 635
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 93/240 (38%), Gaps = 35/240 (14%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G A + N+ + + + ++ I L + F A + +M G +PD
Sbjct: 430 GYITTALKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTF 489
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDD-- 328
G +I CK G + A VY + + P V +I+ LC+ D V +A ++D
Sbjct: 490 GTLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCK-DGLVDVARSLVDVLQ 548
Query: 329 -----------------FSGEARKYAIK---------------PFSSVIRSLCRMKDVHG 356
F+ A K +++VI+ LC+ V
Sbjct: 549 RMGLVDTITYNTLINGYFNCGKFDKAFKLSTLMQNAGILASSATYNTVIKFLCKFGCVQE 608
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
AK L++ M+ G P N + +++ +K +E+ M +G+ PD TY ++S
Sbjct: 609 AKELMTMMVLWGVLPDNITYRTLVININKNCSAEEVIELHDYMVLKGVVPDKLTYENIVS 668
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 159/342 (46%), Gaps = 4/342 (1%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI + +LG AF +F++ TY ++ L R+ + A + +MI
Sbjct: 378 NTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMIN 437
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD +++ CK G A + + + A I + +T +
Sbjct: 438 EGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSR 497
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A + ++ + + ++ V+ LC++ ++ A LL KM+S+G P + S+I
Sbjct: 498 -AFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSII 556
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
A+ + G + E+ M S+GL P V TYT L+ G+A G++E A +E ++
Sbjct: 557 HAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGIL 616
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+ +TY++LI G CK+ D A EM + G+ PN Y LI C +W+ A
Sbjct: 617 PNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMG-NWQEALS 675
Query: 501 LLEDMRLKGLHLNGITR-ALIRAV-KELEEDAIENGEALVEA 540
L + M +G+ + T AL++ + K+ + A+ E+L+++
Sbjct: 676 LYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVRQLESLLDS 717
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 153/333 (45%), Gaps = 3/333 (0%)
Query: 195 LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSV 254
++V+IL+ LI ++SK + VF+K + + + L + + A V
Sbjct: 162 VSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEV 221
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
M E G P ++ +CKGGK ++ + + + + P LI+ L +
Sbjct: 222 YRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSK 281
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
+ E + A ++ + K + ++ +I + A +L +M+ +G P A
Sbjct: 282 KGE-FEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVA 340
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
+NS I K G M+ AM+ L M + L PDV +Y L+ GY G + +A + +E
Sbjct: 341 TYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDEL 400
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
+ + + VTY+TL+ G C+ E + A +L EM + G+ P++ Y L+ C K
Sbjct: 401 RSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSC-KMGS 459
Query: 495 WRTAEKLLEDMRLKGLHLNGITRALIRAVKELE 527
A++ ++M +GL L+ A R V EL+
Sbjct: 460 LSMAQEFFDEMLHEGLELDSYAYA-TRIVGELK 491
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 146/343 (42%), Gaps = 5/343 (1%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
T+ N L+ + K GK + ++ ++ GC N TY I LS++ F+ A +
Sbjct: 233 TIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLI 292
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+M++TG + +I + G EA + K P + I LC+
Sbjct: 293 GEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKL 352
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
A+ L D + ++++I CR+ ++ A L ++ S P
Sbjct: 353 GRMSD-AMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVT 411
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N+++ + G++ A ++ M + G+ PD+ TYT L++G G + A E +E
Sbjct: 412 YNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEML 471
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
L Y T I G KL + A L EM G P++ YN ++ LC K +
Sbjct: 472 HEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLC-KLGNL 530
Query: 496 RTAEKLLEDMRLKGLHLNGIT-RALIRAVKELEEDAIENGEAL 537
A +LL+ M G+ + +T ++I A LE + G +
Sbjct: 531 EEASELLQKMVSDGVIPDYVTYTSIIHA--HLENGRLRKGREI 571
>gi|413921612|gb|AFW61544.1| hypothetical protein ZEAMMB73_526638 [Zea mays]
Length = 456
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 119/295 (40%), Gaps = 37/295 (12%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A EVFN+ +GC E Y ++AL F A+ + +M G PD ++
Sbjct: 163 AVEVFNRLPRFGCPQTTEVYNALLDALCANGNFTGAYKLLRRMARKGVAPDRATFSTLVD 222
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
+C GK +EA LDD +G +
Sbjct: 223 SWCAAGKLQEAQA------------------------------------FLDDMAGRGLR 246
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
++ ++ L R + AK +M EG P A FNS+ A AGD+ A+ +
Sbjct: 247 PPVRGRDLLVDGLVRAGHLEQAKAFALRMTKEGILPDVATFNSLAEALCNAGDVDFAVSL 306
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
L SRGL PD+ TY ++ A G++EEA + A ++ R P Y +I+ CK
Sbjct: 307 LADASSRGLCPDISTYKVMLPAVAKVGKIEEAFRLFYAAVEDGHRPFPSLYAAIIKALCK 366
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
F A +MK G PN Y L++ +C++ + A L +M G
Sbjct: 367 AGRFADAFAFFGDMKTKGHPPNRPVYVMLVK-MCVRGGRFVEAANYLVEMSEAGF 420
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 1/170 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
FS+VI S + A + +++ G P V+N+++ A G+ T A ++L+ M
Sbjct: 147 FSAVISSYGHSRLPDQAVEVFNRLPRFGCPQTTEVYNALLDALCANGNFTGAYKLLRRMA 206
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+G+ PD T++ L+ + G+++EA L++ R L+ G + +
Sbjct: 207 RKGVAPDRATFSTLVDSWCAAGKLQEAQAFLDDMAGRGLRPPVRGRDLLVDGLVRAGHLE 266
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
A M G+ P+V +N L ++LC A D A LL D +GL
Sbjct: 267 QAKAFALRMTKEGILPDVATFNSLAEALC-NAGDVDFAVSLLADASSRGL 315
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 146/325 (44%), Gaps = 21/325 (6%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V + LI F K G + A F++ GC N TY I A + + A V E
Sbjct: 257 VYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYE 316
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
M+ G P+ +I CK GK ++A +Y + +++ + P
Sbjct: 317 MMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPD-------------- 362
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
V + ++D S E + + +++ LC+ V A+ LL M EG P + V+
Sbjct: 363 --VDMHFRVVDGASNEPNVFT---YGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVY 417
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
+++I KAG + A E+ M G P+VYTY+ L+ +++ A ++L++ +
Sbjct: 418 DALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLE 477
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
N + V Y +I G CK+ + D A KL+ M++ G PNV Y +I K+
Sbjct: 478 NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGF-GKSGRVE 536
Query: 497 TAEKLLEDMRLKGLHLNGIT-RALI 520
+LL+ M KG N +T R LI
Sbjct: 537 KCLELLQQMSSKGCAPNFVTYRVLI 561
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 137/333 (41%), Gaps = 11/333 (3%)
Query: 181 WDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIE 240
W + EKE+ V + ++I+ + + A + + C+ N TY +
Sbjct: 26 WREALSLLEKEEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLC 85
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP 300
++ + MI G P ++ +C+ G A+ + + P
Sbjct: 86 GCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQP 145
Query: 301 PQSVVAFLISSLCQEDETVKLALDMLDDFSGEA-------RKYAIKPFSSVIRSLCRMKD 353
V LI +C +E K LD+ + GE K I FS R LC +
Sbjct: 146 GYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFS---RCLCGIGK 202
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
A ++ +M+S+G P + ++ VI A + A ++ + M+ G+ PDVY YT
Sbjct: 203 FEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTT 262
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
L+ + G +E+A +E +++ + VTY LI Y K + A ++ M G
Sbjct: 263 LIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKG 322
Query: 474 VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
PN+ Y LI LC KA A ++ + M+
Sbjct: 323 CTPNIVTYTALIDGLC-KAGKIEKASQIYKIMK 354
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 123/275 (44%), Gaps = 4/275 (1%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
N TY ++ L + A + + M G P+ +I CK GK EA V+
Sbjct: 378 NVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVF 437
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
T E P + LI L + D+ + LAL +L + + ++ +I LC+
Sbjct: 438 TTMLECGYDPNVYTYSSLIDRLFK-DKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCK 496
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ A L+ M +G P + ++I + K+G + +E+L+ M S+G P+ T
Sbjct: 497 VGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVT 556
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
Y L++ + G ++EA ++L E K+ + Y +I G+ + EF +L L E+
Sbjct: 557 YRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNR--EFIASLYLSFEIS 614
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
+ P Y LI + +KA A +L E++
Sbjct: 615 ENDSVPVAPVYRVLIDNF-IKAGRLEIALELNEEL 648
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 129/279 (46%), Gaps = 2/279 (0%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
GC + TY + L++ K A ++ EK+ G P +++ CK G+ +EA
Sbjct: 254 GCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEA 313
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
+ + P LI L +E + + A + + + ++++IR
Sbjct: 314 IDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFE-AYKLFKEMASRGLALDTVCYTALIR 372
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
L + + A ++ M S G P +++I SKAG + A+ + K M +RGL P
Sbjct: 373 GLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAP 432
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
+ Y+ L+ G +M+ A E+L + KK +TY+ LI G CK + + A
Sbjct: 433 NEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFF 492
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
+EM + G +P+V YN LI LC KA + A +L+DM
Sbjct: 493 DEMLEAGCKPDVYTYNILISGLC-KAGNTDAACGVLDDM 530
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 150/342 (43%), Gaps = 16/342 (4%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
T+ N L+ K+G+ + A ++ K D GC + TY I+ L + K A+ +
Sbjct: 293 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF 352
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
++M G D+ +I + GK +A VY P ++ +I L +
Sbjct: 353 KEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKA 412
Query: 316 DETVKLALDMLDDFSGEARKYAIKP--FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
+ A+ + S EAR A +S++I LC+ + + A +L++M P
Sbjct: 413 GR-IGAAVRIFK--SMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 469
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+N +I K+GD+ A M G KPDVYTY L+SG G + AC +L++
Sbjct: 470 ITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDD 529
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
S Y +L+ G CK + + L +EM+ GV N +LI LC KA
Sbjct: 530 MSS-----SRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGVA-NSQTRTRLIFHLC-KAN 582
Query: 494 DWRTAEKLLEDMRLKGL----HLNGITRALIRAVKELEEDAI 531
A L +R +G+ N I ALI++ K E A+
Sbjct: 583 RVDEAVSLFNAIRKEGMPHPYAYNSIISALIKSGKVNEGQAV 624
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 111/288 (38%), Gaps = 9/288 (3%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V L+ +I SK G+ AA +F G N+ Y I L + + D A +
Sbjct: 399 VVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLA 458
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M + PD+ +I CK G + A + E P LIS LC+
Sbjct: 459 QMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAG 518
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
T A +LDD S Y SS++ LC+ + G L +M G +
Sbjct: 519 NT-DAACGVLDDMSSSRFVY-----SSLVDGLCKSGKLEGGCMLFHEMERSG-VANSQTR 571
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
+I KA + A+ + +R G+ P Y Y ++S G++ E + E +
Sbjct: 572 TRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVNEGQAVYQEMTR 630
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
+ VTY+ L+ G D A EM G P V +KL
Sbjct: 631 -WWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGYVPPVSILHKL 677
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 106/220 (48%), Gaps = 9/220 (4%)
Query: 308 LISSLC---QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM 364
LI+ C + +E + +M +DF ++K + V+ LC+ V A +
Sbjct: 160 LITGYCLAREPEEAFAVIREMEEDFGVAP---SLKTHNLVLHGLCKSGKVLAAMDHF-EA 215
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
+ P A F+ +I+ KAG M A + + + G D++TYT +++ A ++
Sbjct: 216 VRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKI 275
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
+EA ++ + N + TY+ L+ G CK+ + A+ LL ++ D G P+V Y L
Sbjct: 276 QEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSL 335
Query: 485 IQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAV 523
I L + + A KL ++M +GL L+ + ALIR +
Sbjct: 336 IDGLGKEKRSFE-AYKLFKEMASRGLALDTVCYTALIRGL 374
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSR--GLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
++V+ + D A E+ + + S G + V+T L+ +A + EA +L
Sbjct: 86 DAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNE 145
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM-KDVGVQPNVDEYNKLIQSLC 489
R T++ LI GYC E + A ++ EM +D GV P++ +N ++ LC
Sbjct: 146 LATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLC 201
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 140/298 (46%), Gaps = 10/298 (3%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A + K +GC A+ +Y ++ L K + + ++M+ P+ +I
Sbjct: 200 AVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIG 259
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
+ C+ G + H V E P + A +I +C+E L++ ++
Sbjct: 260 YLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGH-----LEVANEILNRMPS 314
Query: 336 YAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
Y +KP +++V++ LC + A+ LLS+M + P + FN ++ + + G +
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
+E+L+ M S G PDV TYT +++G+ G ++EA +L + + V+Y +++
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
G C + A +L+++M G PN +N LI LC K L + E LL+ M + G
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE-LLKQMLVNG 491
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 129/296 (43%), Gaps = 2/296 (0%)
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
K A E+ ++ C + T+ ++ + + D + E+M+ G +PD +
Sbjct: 338 KEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTV 397
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEA 333
I+ FCK G EA ++ P ++ LC V A +++ +
Sbjct: 398 INGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVD-AEELMSQMIQQG 456
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
F+++I LC+ V A LL +M+ G P +++VI KAG A+
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
E+L +M ++G+ P+ Y+ + + G++ + ++ + K R V Y+ +I
Sbjct: 517 ELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSL 576
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
CK E D A+ M G PN Y LI+ L + L + A++LL ++ +G
Sbjct: 577 CKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLA-KEAQELLSELCSRG 631
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 130/304 (42%), Gaps = 10/304 (3%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+ + +I K G + A E+ N+ YG N Y ++ L + + A +
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE- 315
+M + D ++ +FC+ G + P +I+ C+E
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405
Query: 316 --DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
DE V L L S K ++ V++ LC A+ L+S+MI +G PP
Sbjct: 406 LIDEAVML----LKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNP 461
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
FN++I+ K G + A+E+LK M G PD+ +Y+ ++ G G+ EEA E+LN
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
+ + Y ++ + + +++ + +KD ++ + YN +I SLC +
Sbjct: 522 MVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKR-- 579
Query: 494 DWRT 497
W T
Sbjct: 580 -WET 582
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 151/363 (41%), Gaps = 46/363 (12%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ A EV ++ GC Y+ +EA R F + V E M G D+
Sbjct: 125 GRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNC 184
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS-VVAF--LISSLCQEDETVKLALDMLD 327
+++ C+ G EA L R+ + ++ +V++ ++ LC + +++D
Sbjct: 185 NLVLNAICEQGCVDEA---VGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE-ELMD 240
Query: 328 DFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG 387
+ I F+++I LCR +L++M G P ++ ++I K G
Sbjct: 241 EMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEG 300
Query: 388 DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV--- 444
+ A E+L M S GLKP+V Y ++ G + + +EA E+L+E + L V
Sbjct: 301 HLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFN 360
Query: 445 --------------------------------TYHTLIRGYCKLEEFDCALKLLNEMKDV 472
TY T+I G+CK D A+ LL M
Sbjct: 361 ILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSC 420
Query: 473 GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAV--KELEED 529
G +PN Y +++ LC A W AE+L+ M +G N +T LI + K L E
Sbjct: 421 GCKPNTVSYTIVLKGLC-SAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQ 479
Query: 530 AIE 532
AIE
Sbjct: 480 AIE 482
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 123/317 (38%), Gaps = 53/317 (16%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
N T++ + L R A V ++M G P I+ C+ G + + V
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169
Query: 291 TLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFSSVIRS 347
K +++++C++ DE V L L L F EA I +++V++
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGL-LRKLAFFGCEAD---IVSYNAVLKG 225
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
LC K + L+ +M+ P FN++I + G E+L M G PD
Sbjct: 226 LCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
+ Y T+I G CK + A ++LN
Sbjct: 286 IRMYA-----------------------------------TIIDGICKEGHLEVANEILN 310
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT----------R 517
M G++PNV YN +++ LC A W+ AE+LL +M K L+ +T
Sbjct: 311 RMPSYGLKPNVVCYNTVLKGLC-SAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369
Query: 518 ALIRAVKELEEDAIENG 534
L+ V EL E + +G
Sbjct: 370 GLVDRVIELLEQMLSHG 386
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 57/136 (41%), Gaps = 1/136 (0%)
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
PP F V+ G + A+E+L M +G P Y ++ G +
Sbjct: 108 PPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVR 167
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+L L + ++ C+ D A+ LL ++ G + ++ YN +++ LC
Sbjct: 168 VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLC 227
Query: 490 LKALDWRTAEKLLEDM 505
+ A W E+L+++M
Sbjct: 228 M-AKRWGDVEELMDEM 242
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 140/298 (46%), Gaps = 10/298 (3%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A + K +GC A+ +Y ++ L K + + ++M+ P+ +I
Sbjct: 200 AVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIG 259
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
+ C+ G + H V E P + A +I +C+E L++ ++
Sbjct: 260 YLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGH-----LEVANEILNRMPS 314
Query: 336 YAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
Y +KP +++V++ LC + A+ LLS+M + P + FN ++ + + G +
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
+E+L+ M S G PDV TYT +++G+ G ++EA +L + + V+Y +++
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
G C + A +L+++M G PN +N LI LC K L + E LL+ M + G
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE-LLKQMLVNG 491
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 129/296 (43%), Gaps = 2/296 (0%)
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
K A E+ ++ C + T+ ++ + + D + E+M+ G +PD +
Sbjct: 338 KEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTV 397
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEA 333
I+ FCK G EA ++ P ++ LC V A +++ +
Sbjct: 398 INGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVD-AEELMSQMIQQG 456
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
F+++I LC+ V A LL +M+ G P +++VI KAG A+
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
E+L +M ++G+ P+ Y+ + + G++ + ++ + K R V Y+ +I
Sbjct: 517 ELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSL 576
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
CK E D A+ M G PN Y LI+ L + L + A++LL ++ +G
Sbjct: 577 CKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLA-KEAQELLSELCSRG 631
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 130/304 (42%), Gaps = 10/304 (3%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+ + +I K G + A E+ N+ YG N Y ++ L + + A +
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE- 315
+M + D ++ +FC+ G + P +I+ C+E
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405
Query: 316 --DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
DE V L L S K ++ V++ LC A+ L+S+MI +G PP
Sbjct: 406 LIDEAVML----LKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNP 461
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
FN++I+ K G + A+E+LK M G PD+ +Y+ ++ G G+ EEA E+LN
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
+ + Y ++ + + +++ + +KD ++ + YN +I SLC +
Sbjct: 522 MVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKR-- 579
Query: 494 DWRT 497
W T
Sbjct: 580 -WET 582
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 151/363 (41%), Gaps = 46/363 (12%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ A EV ++ GC Y+ +EA R F + V E M G D+
Sbjct: 125 GRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNC 184
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS-VVAF--LISSLCQEDETVKLALDMLD 327
+++ C+ G EA L R+ + ++ +V++ ++ LC + +++D
Sbjct: 185 NLVLNAICEQGCVDEA---VGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE-ELMD 240
Query: 328 DFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG 387
+ I F+++I LCR +L++M G P ++ ++I K G
Sbjct: 241 EMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEG 300
Query: 388 DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV--- 444
+ A E+L M S GLKP+V Y ++ G + + +EA E+L+E + L V
Sbjct: 301 HLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFN 360
Query: 445 --------------------------------TYHTLIRGYCKLEEFDCALKLLNEMKDV 472
TY T+I G+CK D A+ LL M
Sbjct: 361 ILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSC 420
Query: 473 GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAV--KELEED 529
G +PN Y +++ LC A W AE+L+ M +G N +T LI + K L E
Sbjct: 421 GCKPNTVSYTIVLKGLC-SAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQ 479
Query: 530 AIE 532
AIE
Sbjct: 480 AIE 482
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 123/317 (38%), Gaps = 53/317 (16%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
N T++ + L R A V ++M G P I+ C+ G + + V
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169
Query: 291 TLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFSSVIRS 347
K +++++C++ DE V L L L F EA I +++V++
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGL-LRKLAFFGCEAD---IVSYNAVLKG 225
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
LC K + L+ +M+ P FN++I + G E+L M G PD
Sbjct: 226 LCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
+ Y T+I G CK + A ++LN
Sbjct: 286 IRMYA-----------------------------------TIIDGICKEGHLEVANEILN 310
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT----------R 517
M G++PNV YN +++ LC A W+ AE+LL +M K L+ +T
Sbjct: 311 RMPSYGLKPNVVCYNTVLKGLC-SAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369
Query: 518 ALIRAVKELEEDAIENG 534
L+ V EL E + +G
Sbjct: 370 GLVDRVIELLEQMLSHG 386
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 57/136 (41%), Gaps = 1/136 (0%)
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
PP F V+ G + A+E+L M +G P Y ++ G +
Sbjct: 108 PPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVR 167
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+L L + ++ C+ D A+ LL ++ G + ++ YN +++ LC
Sbjct: 168 VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLC 227
Query: 490 LKALDWRTAEKLLEDM 505
+ A W E+L+++M
Sbjct: 228 M-AKRWGDVEELMDEM 242
>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 456
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 145/311 (46%), Gaps = 8/311 (2%)
Query: 202 ELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET 261
E++ +K+ A + + G N T I +++SV K+++
Sbjct: 57 EILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFSVLGKILKL 116
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
G P++ + ++ C G+ +++ + + Q L++ LC+ ET +
Sbjct: 117 GYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGET-RC 175
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A+ L + + ++++I LC+ K V+ A S+M + G P + ++I
Sbjct: 176 AIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIG 235
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
+ AG +T A +L M + + P+VYTY L+ G+++EA +L E H R
Sbjct: 236 GFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEM---HYRG 292
Query: 442 SP---VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
P VTY +L+ G+CK + D A L +MK+ G+QPN Y LI LC K + A
Sbjct: 293 QPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLC-KGGRLKDA 351
Query: 499 EKLLEDMRLKG 509
+KL +D+ +KG
Sbjct: 352 QKLFQDLLVKG 362
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 116/238 (48%), Gaps = 2/238 (0%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
II CK EA+ Y+ + ++P LI C + A +L++ +
Sbjct: 198 IIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTG-AFSLLNEMILK 256
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
+ ++ +I +LC+ V AK LL++M G P + S++ + K ++ A
Sbjct: 257 NINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKA 316
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
+ M+ G++P+ YTYT L+ G GG++++A ++ + + TY+ +I G
Sbjct: 317 TALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGG 376
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
CK D AL + ++M+D G PNV + +I+SL K + AEKLL +M KGL
Sbjct: 377 LCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSL-FKKDENDKAEKLLHEMIAKGL 433
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 4/196 (2%)
Query: 324 DMLDDFSGEARKYAIKP---FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
D + F+G + P F ++ L +MK A +L +M +G P N +I
Sbjct: 35 DAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILI 94
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ + G M+ + +L + G +P+ T T LM G G+++++ ++ +
Sbjct: 95 NCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQ 154
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
++ V+Y TL+ G CK+ E CA+K L ++D NV YN +I LC L A
Sbjct: 155 MNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKL-VNEAYD 213
Query: 501 LLEDMRLKGLHLNGIT 516
+M +G+ N IT
Sbjct: 214 FYSEMNARGIFPNVIT 229
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 107/275 (38%), Gaps = 36/275 (13%)
Query: 195 LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSV 254
L V + N +I K A++ +++ G N TY I A+S+
Sbjct: 190 LNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSL 249
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
+MI P+ +I CK GK KEA + LA P VV
Sbjct: 250 LNEMILKNINPNVYTYAILIDALCKEGKVKEAKNL--LAEMHYRGQPADVVT-------- 299
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
++S++ C+ +++ A L KM G P
Sbjct: 300 --------------------------YTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKY 333
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
+ ++I K G + A ++ + + +G DV TY ++ G G ++EA I ++
Sbjct: 334 TYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKM 393
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
+ N + VT+ +IR K +E D A KLL+EM
Sbjct: 394 EDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEM 428
>gi|255660852|gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 141/281 (50%), Gaps = 6/281 (2%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKV---GKIISWFCKGGKAKEAHVVYTLARE 295
I+ + RK D A V E ++ET S+ G +I++ + G ++A + L ++
Sbjct: 36 IQVVVSRKGKDSASDVFEAILETKGTQRSDFYVFSGLMIAYL-ESGFVRDAVQCFRLTKQ 94
Query: 296 KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVH 355
K+ P ++ L E KL D + ++ F+ +++ C+ ++
Sbjct: 95 HKIRVPFDTCRKVLEHL-MEFRYFKLVWDFYKEVLECGYPASLYFFNILMQRFCKEGEMR 153
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
A+++ + G P FN++I+ Y K GD+ + M + G +PDVYTY+ L+
Sbjct: 154 LAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILI 213
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
+G G+++EA E+ NE N + VT+ TLI G+CK E+ D A+++ +M G+
Sbjct: 214 NGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLS 273
Query: 476 PNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
P++ YN LI LC K + + L+++M + GL + I+
Sbjct: 274 PDLITYNTLIYGLCKKG-ELKQVHDLIDEMIMNGLKPDKIS 313
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 130/284 (45%), Gaps = 18/284 (6%)
Query: 235 YYFTI--EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTL 292
Y+F I + + A SV + + + G P +I+ + K G E + +
Sbjct: 137 YFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSA 196
Query: 293 AREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKP----FSSVI 345
P + LI+ LC+E DE +L +MLD+ + P F+++I
Sbjct: 197 MHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDN--------GLVPNGVTFTTLI 248
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
C+ + V A + +M+S+G P +N++I K G++ +++ M GLK
Sbjct: 249 HGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLK 308
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
PD +YT L+ G G +E A E+ N+ + RL V Y LI C+ A K+
Sbjct: 309 PDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKM 368
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
L EM VG++P+ Y +I C K D +TA KLL +M+ G
Sbjct: 369 LREMLSVGLKPDNGTYTMIINEFC-KKRDSKTASKLLREMQRDG 411
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 164/363 (45%), Gaps = 14/363 (3%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L++ + S GK +++ + E ++ V + L+ + + G + A + F
Sbjct: 34 SLIQVVVSRKGKDSASDVFEAILETKGTQRSDFYV--FSGLMIAYLESGFVRDAVQCFRL 91
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ +T +E L + F W ++++E G ++ FCK G+
Sbjct: 92 TKQHKIRVPFDTCRKVLEHLMEFRYFKLVWDFYKEVLECGYPASLYFFNILMQRFCKEGE 151
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAF--LISS---LCQEDETVKLALDMLDDFSGEARKYA 337
+ A V+ + + P SVV+F LI+ L DE +L M +
Sbjct: 152 MRLAQSVFDAITKWGLRP--SVVSFNTLINGYIKLGDLDEGFRLKSAM----HASGAQPD 205
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+ +S +I LC+ + A L ++M+ G P F ++I + K + AME+ K
Sbjct: 206 VYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYK 265
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M S+GL PD+ TY L+ G G++++ ++++E N + ++Y TLI G CK
Sbjct: 266 QMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEG 325
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITR 517
+ + AL+L N+M ++ + Y LI LC + AEK+L +M GL + T
Sbjct: 326 DLEIALELRNKMIQESIRLDDVAYTALISCLCREG-RASDAEKMLREMLSVGLKPDNGTY 384
Query: 518 ALI 520
+I
Sbjct: 385 TMI 387
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 131/299 (43%), Gaps = 2/299 (0%)
Query: 180 LWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI 239
+WD KE+ E ++ N L+ F K G+ + A VF+ +G + ++ I
Sbjct: 120 VWDFYKEVLECGYPA-SLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLI 178
Query: 240 EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
+ D + + M +G+ PD +I+ CK GK EA+ ++ + +
Sbjct: 179 NGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLV 238
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P LI C+ +E V LA+++ + + ++++I LC+ ++
Sbjct: 239 PNGVTFTTLIHGHCK-NEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHD 297
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
L+ +MI G P + ++I K GD+ A+E+ M ++ D YT L+S
Sbjct: 298 LIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLC 357
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G+ +A ++L E + TY +I +CK + A KLL EM+ G P V
Sbjct: 358 REGRASDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPLPGV 416
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 1/208 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K GK A E+FN+ D G V N T+ I + + D A + ++M+ G
Sbjct: 212 LINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQG 271
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD +I CK G+ K+ H + + P + LI C+E + +++A
Sbjct: 272 LSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGD-LEIA 330
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
L++ + E+ + ++++I LCR A+ +L +M+S G P N + +I+
Sbjct: 331 LELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLREMLSVGLKPDNGTYTMIINE 390
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ K D A ++L+ M+ G P V T
Sbjct: 391 FCKKRDSKTASKLLREMQRDGPLPGVVT 418
>gi|147812173|emb|CAN61517.1| hypothetical protein VITISV_033966 [Vitis vinifera]
Length = 635
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 151/341 (44%), Gaps = 6/341 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+A++ A S +E + +KE G K T N LI + G+ + + ++
Sbjct: 146 NAVINAFSESGNMQEAMKYFWKMKESGSKP----TTSTFNTLIKGYGIAGEPEESQKLLZ 201
Query: 222 KFG-DYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
D N TY + A + AW+V KM+ +G PD+ I + + +
Sbjct: 202 LMSQDENVRPNLRTYNVLVRAWCNKXNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQN 261
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
G+A +A + + + P + +I C+E + +K AL + + +
Sbjct: 262 GEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGK-IKEALQFVYRMKDLGLQPNLVV 320
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F+S+I+ D G +L+ M G P F+++++A+S AG M E+ M
Sbjct: 321 FNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMV 380
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
++PD + Y+ L GY G+ E+A EILN K+ + V + T+I G+C +
Sbjct: 381 KARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVMFTTIINGWCSAGRME 440
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
A+K+ +M + G+ PN+ + LI W++ E L
Sbjct: 441 YAIKIFEKMCECGIAPNLKTFETLIWGYGEARQPWKSEEVL 481
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 157/334 (47%), Gaps = 14/334 (4%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
TV +L+ + + G+ + + + + G + TY + AL+ +K FD S+
Sbjct: 71 TVRSRTKLMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSII 130
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSL--- 312
++ E G PDS +I+ F + G +EA + +E P S LI
Sbjct: 131 SQVEENGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIA 190
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
+ +E+ KL M D E + ++ ++ ++R+ C ++ A ++ KM++ G P
Sbjct: 191 GEPEESQKLLZLMSQD---ENVRPNLRTYNVLVRAWCNKXNIMKAWNVVYKMVASGLQPD 247
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+N++ +AY++ G+ + A ++ M++ ++P+ T ++ GY G+++EA + +
Sbjct: 248 AVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVY 307
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL---- 488
K + + V +++LI+G+ + D ++L M++ GV+P+V ++ ++ +
Sbjct: 308 RMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAG 367
Query: 489 ----CLKALDWRTAEKLLEDMRLKGLHLNGITRA 518
C + D ++ D + + G RA
Sbjct: 368 FMDKCREIFDDMVKARIQPDAHVYSILAKGYVRA 401
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 99/197 (50%), Gaps = 2/197 (1%)
Query: 325 MLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
+LD K ++ +++++ +L K +++S++ G P + FN+VI+A+S
Sbjct: 94 ILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFFNAVINAFS 153
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS-RLSP 443
++G+M AM+ M+ G KP T+ L+ GY G+ EE+ ++L ++ + R +
Sbjct: 154 ESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLZLMSQDENVRPNL 213
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
TY+ L+R +C A ++ +M G+QP+ YN + + + AE ++
Sbjct: 214 RTYNVLVRAWCNKXNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNG-EASQAEGIIL 272
Query: 504 DMRLKGLHLNGITRALI 520
+M+ + N T +I
Sbjct: 273 EMQNSNVQPNERTCCII 289
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 89/180 (49%), Gaps = 8/180 (4%)
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
+++L +I G P + ++++A + ++ + G++PD + +++
Sbjct: 92 QSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFFNAVINA 151
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM-KDVGVQP 476
++ G M+EA + + K++ S+ + T++TLI+GY E + + KLL M +D V+P
Sbjct: 152 FSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLZLMSQDENVRP 211
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIENGEA 536
N+ YN L+++ C K + A ++ M GL + +T I +NGEA
Sbjct: 212 NLRTYNVLVRAWCNKX-NIMKAWNVVYKMVASGLQPDAVTYNTIATA------YAQNGEA 264
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 163/344 (47%), Gaps = 5/344 (1%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
I N LI K G ++ + GCV N+ TY I L + D A S+ E+M
Sbjct: 259 IYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERM 318
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+ + +P+ G +I+ K +A +A + + E+ + Q + + LIS L +E +
Sbjct: 319 VSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKA 378
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+ A+ + + + K I +S ++ LCR + AK +L++MI+ G P ++S
Sbjct: 379 EE-AMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSS 437
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
++ + K G A+++ K M G + + Y+ L+ G G+++EA + ++
Sbjct: 438 LMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIG 497
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEM---KDVGVQPNVDEYNKLIQSLCLKALDW 495
+ V Y ++I+G C + D ALKL +EM ++ QP+V YN L+ LC++ D
Sbjct: 498 IKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQK-DI 556
Query: 496 RTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIENGEALVE 539
A LL M +G + IT + ++ + G + +E
Sbjct: 557 SRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLE 600
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 92/195 (47%), Gaps = 10/195 (5%)
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGA----KTLLSKMISEGPPP 371
D+ V L M+D+F K ++K F+SV+ + H +++ ++ P
Sbjct: 129 DKAVDLFHRMVDEFRC---KRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISP 185
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
FN VI A K + A+E+ + M R PD YTY LM G +++EA +L
Sbjct: 186 NGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLL 245
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
+E + SPV Y+ LI G CK + KL++ M G PN YN LI LCLK
Sbjct: 246 DEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLK 305
Query: 492 A-LDWRTAEKLLEDM 505
LD A LLE M
Sbjct: 306 GKLD--KAVSLLERM 318
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 130/302 (43%), Gaps = 11/302 (3%)
Query: 197 VEILNELIALFSKLGKGK---AAFEVFNKFGD-YGCVANQETYYFTI-----EALSRRKI 247
V I I +F GK A ++F++ D + C + +++ + E L R +
Sbjct: 109 VIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGL 168
Query: 248 FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF 307
+ + V M S P+ +I CK A V+ E+K P
Sbjct: 169 EFYDYVVNSNMNMNIS-PNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCT 227
Query: 308 LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
L+ LC+E E + A+ +LD+ E + ++ +I LC+ D+ L+ M +
Sbjct: 228 LMDGLCKE-ERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLK 286
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P +N++I G + A+ +L+ M S P+ TY L++G + +A
Sbjct: 287 GCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDA 346
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
+L+ ++ L+ Y LI G K + + A+ L +M + G +PN+ Y+ L+
Sbjct: 347 VRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDG 406
Query: 488 LC 489
LC
Sbjct: 407 LC 408
>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
Length = 770
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 140/312 (44%), Gaps = 2/312 (0%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
++ I K GK + A E++ G N T I L + A V + M
Sbjct: 429 VMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAM 488
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+++G D +I + CK K +EA + ++ P + + C +
Sbjct: 489 VDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGK- 547
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
V+ L +LD E K I + ++I C+ KDVH A L ++I G P ++N+
Sbjct: 548 VEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNA 607
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I Y + G ++ A+ +L M+ G++P TY LM + G +EEA EI + +
Sbjct: 608 LIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKN 667
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
L + Y +I+G+CK+ + D A+ EM ++PN Y L+ + C K + A
Sbjct: 668 IELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYC-KCGNKEEA 726
Query: 499 EKLLEDMRLKGL 510
KL ++M G+
Sbjct: 727 FKLFDEMVSSGI 738
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 139/309 (44%), Gaps = 3/309 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I + G+ AAF + + G TY ++AL R + A+ + +M+E
Sbjct: 222 MIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGR 281
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P G +I+ +G + E V + P + + LI C+E + A
Sbjct: 282 LRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSE-A 340
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
L + D+ + K + ++ + ++LC+ ++ A+ +L +M+ G ++FNSV++
Sbjct: 341 LRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAW 400
Query: 383 YSKA-GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
+ + G + + +++ M +R LKP+ T + G+ EEA EI +
Sbjct: 401 HLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGV 460
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+ T + LI G C+ A K+L M D GV+ + YN +IQ C KA A +L
Sbjct: 461 NIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQ-FCCKASKMEEAIQL 519
Query: 502 LEDMRLKGL 510
+DM +G
Sbjct: 520 RDDMIKRGF 528
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 117/238 (49%), Gaps = 21/238 (8%)
Query: 323 LDMLDDFSGEARK-YAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
LD+ GE R A+ P ++ +I++LCR ++ A +L+++ G P +N
Sbjct: 196 LDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYN 255
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
++ A ++G + A ++ M L+P + T+ L++G A G + E +L E +
Sbjct: 256 VLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGF 315
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
+ V Y+ LI +C+ AL+L +EM G++ V YN + ++LC K +
Sbjct: 316 GITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALC-KEGEMEH 374
Query: 498 AEKLLEDMRLKGL-------------HLNGITR--ALIRAVKELEEDAIENGEALVEA 540
AE++L++M L G+ HL G R ++R ++E+ ++ +A++ A
Sbjct: 375 AEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTA 432
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 132/320 (41%), Gaps = 14/320 (4%)
Query: 143 LVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNE 202
LVLG+ L V +AL+ +C KE + + + G + + N
Sbjct: 452 LVLGKGL-----GVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRI----TYNI 502
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I K K + A ++ + G + T+ + A + + ++M G
Sbjct: 503 MIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEG 562
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVV--YTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
PD G II +CK AK+ H Y + K P +V+ + + ++
Sbjct: 563 LKPDIVTYGTIIDGYCK---AKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSIS 619
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A+ +LD + ++S++ +C V AK + ++ I + G + +I
Sbjct: 620 DAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIII 679
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ K G + A+ K M R ++P+ TYT LM Y G EEA ++ +E +
Sbjct: 680 QGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIV 739
Query: 441 LSPVTYHTLIRGYCKLEEFD 460
V+Y+TLI G C+++ D
Sbjct: 740 PDTVSYNTLISGCCEVDSLD 759
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV-T 445
G ++ A + + +RG P + T L+ GGQ++ A ++ E + ++ V T
Sbjct: 159 GSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYT 218
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA-------LDWRTA 498
Y +I+ C+ E D A +L E++ G+QP V YN L+ +LC L R
Sbjct: 219 YTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMV 278
Query: 499 E-KLLEDMRLKGLHLNGITRA 518
E +L + G+ +NG+ R
Sbjct: 279 EGRLRPSIVTFGILINGLARG 299
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 94/225 (41%), Gaps = 2/225 (0%)
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVV-AFLISSLCQEDETVK 320
G+ P + ++ GG+ A V+ R+ P +I +LC+ E +
Sbjct: 175 GASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGE-ID 233
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A ML + + + ++ ++ +LCR V A L +M+ P F +I
Sbjct: 234 AAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILI 293
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ ++ +L+ M G+ P+ Y L+ + G EA + +E +
Sbjct: 294 NGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIK 353
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
+ VTY+ + + CK E + A ++L+EM G+ + +N ++
Sbjct: 354 QTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVV 398
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 158/350 (45%), Gaps = 6/350 (1%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
V +AL+ C +EV+ L++ + G + ++N L S++G + A V
Sbjct: 245 VYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTL----SEMGNVEMALAV 300
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
K GC N T+ ++ A + +MI+ GS P++ +I C
Sbjct: 301 LAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCS 360
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
GK EA V ++P ++ + LI + + V A ++ + +
Sbjct: 361 YGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVG-ASEIWNKMITNGCLPNVV 419
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
++ ++ LCR + A L+ M + PP FN+ I +G AM++L M
Sbjct: 420 VYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQM 479
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
R G P+V TY ++ G N + EA +I+ E ++ + + VTY+T++ G+C F
Sbjct: 480 RQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMF 539
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
AL++ ++ G +P+ YN +I + C K + +TA +L++ + KG
Sbjct: 540 KGALQIAGKLLVGGTKPDSITYNTVIYAYC-KQGEVKTAIQLVDRLTKKG 588
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 146/310 (47%), Gaps = 7/310 (2%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
+V+I N ++ K + ++N G N TY ++AL + D A +
Sbjct: 142 SVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLL 201
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+M G +PD+ ++S C+ GK +EA L+ K + P V LI+ C+E
Sbjct: 202 AEMSYKGCIPDAVSYTTVVSSMCRLGKVEEAR---ELSMRIKSFVP--VYNALINGFCRE 256
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ ++ ++ ++ + E + +S+VI +L M +V A +L+KM G P
Sbjct: 257 HK-MEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHT 315
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
F S++ Y G + A+++ M G +P+ Y L+ G + G+M EA + + +
Sbjct: 316 FTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKME 375
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+N + TY TLI G+ K + A ++ N+M G PNV Y ++ LC ++ +
Sbjct: 376 RNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSM-F 434
Query: 496 RTAEKLLEDM 505
A L+E+M
Sbjct: 435 NHALHLIENM 444
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 139/310 (44%), Gaps = 13/310 (4%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I + + G + A + F + G++GC + + Y ++AL F + M G
Sbjct: 114 VINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDG 173
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ---EDETV 319
+ ++ CK + A + K P ++SS+C+ +E
Sbjct: 174 IELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEAR 233
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
+L++ + K + ++++I CR + L ++M EG P +++V
Sbjct: 234 ELSMRI---------KSFVPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTV 284
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I+ S+ G++ A+ +L M RG P+V+T+T LM GY GG++ EA ++ N + S
Sbjct: 285 INTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGS 344
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
+ V Y+TLI G C + A+ + +M+ GV PN Y+ LI KA D A
Sbjct: 345 EPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFA-KAGDLVGAS 403
Query: 500 KLLEDMRLKG 509
++ M G
Sbjct: 404 EIWNKMITNG 413
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 133/315 (42%), Gaps = 40/315 (12%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V + N LI F + K + FE+FN+ G + TY I LS + A +V
Sbjct: 243 VPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLA 302
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
KM G P+ ++ + GG+ LC+
Sbjct: 303 KMFLRGCSPNVHTFTSLMKGYFMGGR-----------------------------LCE-- 331
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
ALD+ + E + ++++I LC + A ++ KM G P +
Sbjct: 332 -----ALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTY 386
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
+++I ++KAGD+ A E+ M + G P+V YT ++ A ++
Sbjct: 387 STLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMAN 446
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ + +T++T I+G C + + A+K+LN+M+ G PNV YN+++ L A R
Sbjct: 447 GNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGL-FNAKRTR 505
Query: 497 TAEKL---LEDMRLK 508
A ++ +E+M +K
Sbjct: 506 EALQIVGEIEEMEIK 520
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 114/251 (45%), Gaps = 2/251 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F+K G A E++NK GC+ N Y ++ L R +F+ A + E M
Sbjct: 389 LIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGN 448
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P++ I C GK + A V R+ P + ++ L T + A
Sbjct: 449 CPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRT-REA 507
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
L ++ + K + +++++ C GA + K++ G P + +N+VI A
Sbjct: 508 LQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYA 567
Query: 383 YSKAGDMTPAMEMLKLMRSRGLK-PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
Y K G++ A++++ + +G PDV+TYT L+ G N ++EA L++
Sbjct: 568 YCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICP 627
Query: 442 SPVTYHTLIRG 452
+ T++ L+RG
Sbjct: 628 NRATWNALVRG 638
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 138/321 (42%), Gaps = 20/321 (6%)
Query: 176 EVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETY 235
E LW+ + + G + V N LI GK A V K G N+ TY
Sbjct: 331 EALDLWNRMIQEGSEPNTV----AYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTY 386
Query: 236 YFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA-HVVYTLAR 294
I+ ++ A + KMI G LP+ ++ C+ A H++ +A
Sbjct: 387 STLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMAN 446
Query: 295 EKKMYPPQSVV-AFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLC 349
PP ++ I LC +T + A+ +L+ + R+Y P ++ V+ L
Sbjct: 447 GN--CPPNTITFNTFIKGLCCSGKT-EWAMKVLN----QMRQYGCAPNVTTYNEVLDGLF 499
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAV-FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
K A ++ + I E N V +N+++S + AG A+++ + G KPD
Sbjct: 500 NAKRTREALQIVGE-IEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDS 558
Query: 409 YTYTGLMSGYANGGQMEEACEILNE-AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
TY ++ Y G+++ A ++++ KK TY +L+ G C D A+ L+
Sbjct: 559 ITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLD 618
Query: 468 EMKDVGVQPNVDEYNKLIQSL 488
+M + G+ PN +N L++ L
Sbjct: 619 KMINEGICPNRATWNALVRGL 639
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 83/177 (46%), Gaps = 1/177 (0%)
Query: 314 QEDETVKLALDMLDDFSG-EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
+ + + LAL + + K+ ++++I+ L +D+ G + LL M EG
Sbjct: 48 KNEPNILLALHFFKSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCN 107
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+F VI+AY +AG A++ + G KP V Y ++ + + + I N
Sbjct: 108 EDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYN 167
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
K++ L+ TY+ L++ CK + D A KLL EM G P+ Y ++ S+C
Sbjct: 168 NMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMC 224
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 144/321 (44%), Gaps = 7/321 (2%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
TV I N L+ K + ++ G + N TY ++AL + D A +
Sbjct: 143 TVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLF 202
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+M G PD+ ++S CK GK +A LA K P V LI +C+E
Sbjct: 203 VEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAR---ELAGRFK--PSVPVYNALIDGMCKE 257
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+++A+ +L + + +S +I SLC +V A L ++M G
Sbjct: 258 GR-IEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHT 316
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
F +I G + A+++ KLM G +P+V Y L+ G + G +EEA ++ ++ +
Sbjct: 317 FTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQ 376
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
++ + TY LI G+ K + A + N M G +PNV Y ++ LC ++ +
Sbjct: 377 RSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSM-F 435
Query: 496 RTAEKLLEDMRLKGLHLNGIT 516
A L+E M L+G N +T
Sbjct: 436 DQANSLVEKMTLEGCTPNTMT 456
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 147/351 (41%), Gaps = 46/351 (13%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ +CS+ +E + D ++ G + V + LI F+K G A E +N
Sbjct: 353 NTLIHGLCSNGSLEEALQVCDQMQRSG----CLPNVTTYSILIDGFAKSGDLVGASETWN 408
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ +GC N TY ++ L + +FD A S+ EKM G P++ I C G
Sbjct: 409 RMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNG 468
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ V+ A+ +L+ G I +
Sbjct: 469 R------------------------------------VEWAMKLLERMQGHGCLPNITTY 492
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+ ++ +L RM A L ++ + P +N+V+ +S+AG M A+++
Sbjct: 493 NELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALV 552
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEA---KKNHSRLSPVTYHTLIRGYCKLEE 458
RG PD TY ++ Y G+++ A +++ K+ H + +TY +LI G C
Sbjct: 553 RGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDI--ITYTSLIWGACNWMN 610
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
+ A+ L++ + G+ PN +N L++ +L +L+D+ KG
Sbjct: 611 IEEAMAFLDKAINQGICPNFATWNALVRCF-FDSLGHMGPIHILDDILRKG 660
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 148/346 (42%), Gaps = 10/346 (2%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNE--LIALFSKLGKGKAAF 217
V +AL+ +C G+ EV +K +GE + +++ +I G + AF
Sbjct: 246 VYNALIDGMCKE-GRIEV-----AIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAF 299
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
+F + GC AN T+ I+ R A + + MI+ G P+ +I
Sbjct: 300 ALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGL 359
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
C G +EA V + P + + LI + + V A + + +
Sbjct: 360 CSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVG-ASETWNRMISHGCRPN 418
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+ ++ ++ LC+ A +L+ KM EG P FN+ I G + AM++L+
Sbjct: 419 VVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLE 478
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M+ G P++ TY L+ + EEA + E + + + + VTY+T++ G+ +
Sbjct: 479 RMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAG 538
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
AL+L + G P+ YN +I + C K + A +L+E
Sbjct: 539 MMGEALQLFGKALVRGTAPDSITYNTMIHAYC-KQGKVKIAAQLVE 583
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 121/293 (41%), Gaps = 6/293 (2%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
GK A +++ GC N Y I L + A VC++M +G LP+
Sbjct: 328 GKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTY 387
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
+I F K G A + P ++ LC+ + A +++ +
Sbjct: 388 SILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCK-NSMFDQANSLVEKMT 446
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
E F++ I+ LC V A LL +M G P +N ++ A +
Sbjct: 447 LEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYE 506
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A + + + +R L+P++ TY ++ G++ G M EA ++ +A + +TY+T+I
Sbjct: 507 EAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMI 566
Query: 451 RGYCKLEEFDCALKLLNEMKDVG-VQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
YCK + A +L+ + + P++ Y LI C +W E+ +
Sbjct: 567 HAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGAC----NWMNIEEAM 615
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 149/355 (41%), Gaps = 11/355 (3%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ LLKA+C + + L+ + G V +++ L K GK A E+
Sbjct: 183 NILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSL----CKAGKIDDARELAG 238
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+F + Y I+ + + + A + +M++ G P+ II+ C G
Sbjct: 239 RFK-----PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSG 293
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ A ++ + LI C + ALD+ + + + +
Sbjct: 294 NVELAFALFAQMFLRGCDANIHTFTPLIKG-CFMRGKLYEALDLWKLMIQDGCEPNVVAY 352
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+++I LC + A + +M G P ++ +I ++K+GD+ A E M S
Sbjct: 353 NTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMIS 412
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G +P+V TYT ++ ++A ++ + + +T++T I+G C +
Sbjct: 413 HGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEW 472
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A+KLL M+ G PN+ YN+L+ +L + + A L +++ + L N +T
Sbjct: 473 AMKLLERMQGHGCLPNITTYNELLDAL-FRMNKYEEAFGLFQEIEARNLQPNLVT 526
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 71/160 (44%)
Query: 330 SGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
+ A ++ + +I L R ++ + +L +M +G +F +I+ Y + G
Sbjct: 66 NSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSA 125
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
A++M + G KP V Y L+ + + + + KK+ + TY+ L
Sbjct: 126 EQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNIL 185
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
++ CK + D A KL EM + G P+ Y ++ SLC
Sbjct: 186 LKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLC 225
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 81/203 (39%), Gaps = 31/203 (15%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F +I R+ A + ++ G P ++N ++ A + M+
Sbjct: 112 FICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMK 171
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEI----------------------------LN 432
GL P+V+TY L+ +++ A ++ ++
Sbjct: 172 KDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKID 231
Query: 433 EAKKNHSRLSPV--TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
+A++ R P Y+ LI G CK + A+KLL EM D GV PNV Y+ +I SLC+
Sbjct: 232 DARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCV 291
Query: 491 KALDWRTAEKLLEDMRLKGLHLN 513
+ A L M L+G N
Sbjct: 292 SG-NVELAFALFAQMFLRGCDAN 313
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 166/382 (43%), Gaps = 11/382 (2%)
Query: 151 CFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLT-VEILNELIALFSK 209
C + +T G++ +K +C + E+ A + +V E+ E G+ V N ++ K
Sbjct: 167 CPPELITFGLI---IKGLCK---EGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCK 220
Query: 210 LGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEK 269
+ A VF + + GC N TY I+ LS+ D A + KM+E G ++
Sbjct: 221 EQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVT 280
Query: 270 VGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDF 329
++ K G+ ++A VV R+ P LI + + ++ A+ +L +
Sbjct: 281 YSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKR-QRLREAVGLLREM 339
Query: 330 SGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
++ ++++ LCR A +L M + G P ++S++ KAG +
Sbjct: 340 LEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRV 399
Query: 390 TPAMEML-KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHT 448
T A+ K+ R + P V Y+ L+ G G+++EA E L + VT+
Sbjct: 400 TEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSI 459
Query: 449 LIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLK 508
LI G C D L+L M + G P++ Y L+ LC +A A L + MR
Sbjct: 460 LINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLC-RASRVDEAFDLFQQMRSD 518
Query: 509 GLHLNGIT-RALIRAVKELEED 529
GL + T R +I + E+ D
Sbjct: 519 GLSPDRSTRRTMIHGLLEVNRD 540
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 163/357 (45%), Gaps = 13/357 (3%)
Query: 167 AICSSVGK-KEVYALWDIVKEIGEKEKGVL-TVEILNELIALFSKLGKGKAAFEVFNKFG 224
A+ +GK + V +D+ +E + KG TV N +I K G+ + A +++
Sbjct: 35 ALIDGLGKQRRVKEAYDLFEE--ARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMA 92
Query: 225 -DYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
+G TY I+ L R D + E+M G P++ +++ G++
Sbjct: 93 IHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRS 152
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDF----SGEARKYAIK 339
KEA + P +I LC+E E ++ A ++D+ SG + +
Sbjct: 153 KEAFSLLEQMAANGCPPELITFGLIIKGLCKEGE-IEAAFRVVDEMFMIESGLSPD--VI 209
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
F+SV+ LC+ + + A + + + G P ++++I SK M A+++L M
Sbjct: 210 TFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKM 269
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
G + + TY+ ++ G G+ME+A +L + + VTY+TLI G+ K +
Sbjct: 270 VELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRL 329
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A+ LL EM + G P+V Y L LC ++ + A ++L+ M +G N IT
Sbjct: 330 REAVGLLREMLEAGFHPSVVTYTTLCHGLC-RSGRFDEAVEILDYMAARGCAPNAIT 385
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 140/311 (45%), Gaps = 11/311 (3%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM-- 258
N L+ G+ K AF + + GC T+ I+ L + + A+ V ++M
Sbjct: 140 NTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFM 199
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI---SSLCQE 315
IE+G PD ++ CK + +AH V+ A E+ P + LI S + +
Sbjct: 200 IESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKM 259
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
DE ++L M++ A +S+V+ L ++ + A +L +M G P
Sbjct: 260 DEALQLLAKMVE-LGCRANTVT---YSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVT 315
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N++I + K + A+ +L+ M G P V TYT L G G+ +EA EIL+
Sbjct: 316 YNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMA 375
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM-KDVGVQPNVDEYNKLIQSLCLKALD 494
+ +TY +++ G CK AL +M +D V P+V Y+ LI LC KA
Sbjct: 376 ARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLC-KAGK 434
Query: 495 WRTAEKLLEDM 505
A + LE M
Sbjct: 435 IDEAYEFLERM 445
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 122/269 (45%), Gaps = 11/269 (4%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
GC N TY + AL + A+S+ E+M G P+ G II CK G+ + A
Sbjct: 131 GCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAA 190
Query: 287 HVVY--TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP---- 340
V E + P ++ LC+E LD + F A + +P
Sbjct: 191 FRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRI----LDAHNVFK-RALERGCRPNVVT 245
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+S++I L +M + A LL+KM+ G +++V+ K G M A+ +L+ MR
Sbjct: 246 YSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMR 305
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G PD TY L+ G+ ++ EA +L E + S VTY TL G C+ FD
Sbjct: 306 DAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFD 365
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A+++L+ M G PN Y+ ++ LC
Sbjct: 366 EAVEILDYMAARGCAPNAITYSSIVDGLC 394
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 134/284 (47%), Gaps = 11/284 (3%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
I+ L + + D A ++ ++M++ PD G +I K + KEA+ ++ AR K
Sbjct: 2 IDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGC 61
Query: 299 YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDV 354
+P +I LC+ ++ AL + DD A + +P +S++I LCR +V
Sbjct: 62 HPTVVTYNTMIDGLCKCGR-IENALTLYDDM---AIHFGFRPTVVTYSTLIDGLCRDHEV 117
Query: 355 HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
LL +M G P +N++++A G A +L+ M + G P++ T+ +
Sbjct: 118 DKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLI 177
Query: 415 MSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
+ G G++E A +++E S LSP +T+++++ G CK + A + +
Sbjct: 178 IKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALER 237
Query: 473 GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
G +PNV Y+ LI L K A +LL M G N +T
Sbjct: 238 GCRPNVVTYSTLIDGLS-KMAKMDEALQLLAKMVELGCRANTVT 280
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 105/220 (47%), Gaps = 4/220 (1%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
+I CK K +A ++ +K +YP LI L ++ VK A D+ ++ +
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQ-RRVKEAYDLFEEARAK 59
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM-ISEGPPPGNAVFNSVISAYSKAGDMTP 391
+ ++++I LC+ + A TL M I G P ++++I + ++
Sbjct: 60 GCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDK 119
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
++L+ M RG P+ TY L++ G+ +EA +L + N +T+ +I+
Sbjct: 120 GCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIK 179
Query: 452 GYCKLEEFDCALKLLNEMKDV--GVQPNVDEYNKLIQSLC 489
G CK E + A ++++EM + G+ P+V +N ++ LC
Sbjct: 180 GLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLC 219
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 2/139 (1%)
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I K+ + A+ + K M + + PDV TY L+ G +++EA ++ EA+
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK-DVGVQPNVDEYNKLIQSLCLKALDWRT 497
+ VTY+T+I G CK + AL L ++M G +P V Y+ LI LC + +
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLC-RDHEVDK 119
Query: 498 AEKLLEDMRLKGLHLNGIT 516
KLLE+M +G N +T
Sbjct: 120 GCKLLEEMAGRGCAPNAVT 138
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 153/341 (44%), Gaps = 19/341 (5%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
+ K+ + A +V + + GC N TY I L R + A+ + M + G +PD
Sbjct: 232 YCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPD 291
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLAL 323
G +I+ CK ++ EA + ++ P V A LI +E DE K+
Sbjct: 292 GFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIK 351
Query: 324 DMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
+M+ ++P + +++R LC+M + A LL +M+ + P +N +
Sbjct: 352 EMV--------AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLI 403
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I + + A +L M + G+ P+VYTY+ ++ G G+ E+A ++L E
Sbjct: 404 IEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL 463
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
+ + Y LI GYC+ A ++ ++M V V P++ YN LI L K +
Sbjct: 464 KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLS-KVGRVEEST 522
Query: 500 KLLEDMRLKGLHLNGIT-RALIRAVKELEEDAIENGEALVE 539
K M+ +GL N T LI L+ +E+ E LV+
Sbjct: 523 KYFAQMQERGLLPNEFTYSGLIHGY--LKNGDLESAEQLVQ 561
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 121/252 (48%), Gaps = 10/252 (3%)
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
G + +CK + A V RE+ LI+ LC+ A++ F
Sbjct: 226 GSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSG-----AVEEAFGFK 280
Query: 331 GEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
+ Y + P + ++I LC+ + + AK LL +M P V+ ++I + +
Sbjct: 281 KDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMRE 340
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
G+ A +M+K M + G++P+ TY L+ G GQM+ A +L + ++ R +TY
Sbjct: 341 GNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITY 400
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
+ +I G+ + A +LL+EM++ G+ PNV Y+ +I LC ++ + A LLE+M
Sbjct: 401 NLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLC-QSGEPEKASDLLEEMT 459
Query: 507 LKGLHLNGITRA 518
KGL N A
Sbjct: 460 TKGLKPNAFVYA 471
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 155/333 (46%), Gaps = 3/333 (0%)
Query: 183 IVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEAL 242
++ E+ E+ G+ TV N LIA + G + AF DYG V + TY I L
Sbjct: 244 VLVEMRERGCGLNTVT-YNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGL 302
Query: 243 SRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQ 302
+ + + A ++ ++M P+ +I F + G A EA + + P +
Sbjct: 303 CKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNK 362
Query: 303 SVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLS 362
L+ LC+ + + +L +L ++ + ++ +I R A LLS
Sbjct: 363 ITYDNLVRGLCKMGQMDRASL-LLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLS 421
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG 422
+M + G P ++ +I ++G+ A ++L+ M ++GLKP+ + Y L+SGY G
Sbjct: 422 EMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREG 481
Query: 423 QMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
+ ACEI ++ K + Y++LI G K+ + + K +M++ G+ PN Y+
Sbjct: 482 NVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYS 541
Query: 483 KLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
LI LK D +AE+L++ M GL N +
Sbjct: 542 GLIHGY-LKNGDLESAEQLVQRMLDTGLKPNDV 573
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 141/310 (45%), Gaps = 16/310 (5%)
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
K AF + ++ + G N TY I L + + A + E+M G P++ +
Sbjct: 414 KDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPL 473
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPP---QSVVAFLISSLCQEDETVKLALDMLDDFS 330
IS +C+ G A ++ + + P + + F +S + + +E+ K +
Sbjct: 474 ISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK--------YF 525
Query: 331 GEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
+ ++ + P +S +I + D+ A+ L+ +M+ G P + ++ ++ +Y K+
Sbjct: 526 AQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKS 585
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
D+ K M +G+ D Y L+ ++ G ME A +L+ +KN S Y
Sbjct: 586 DDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVY 645
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
+LI G CK + + A +L+EM GV PN+ YN LI LC K+ D A + +
Sbjct: 646 SSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLC-KSGDISYARNVFNSIL 704
Query: 507 LKGLHLNGIT 516
KGL N +T
Sbjct: 705 AKGLVPNCVT 714
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 156/386 (40%), Gaps = 41/386 (10%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+ +C S E AL D + K V + LI F + G AF++ +
Sbjct: 297 ALINGLCKSRRSNEAKALLDEMSCAELKP----NVVVYANLIDGFMREGNADEAFKMIKE 352
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G N+ TY + L + D A + ++M+ PD+ II +
Sbjct: 353 MVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHS 412
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
K+A + + + P + +I LCQ E K A D+L++ + + K ++
Sbjct: 413 KKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEK-ASDLLEEMTTKGLKPNAFVYA 471
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+I CR +V A + KM P +NS+I SK G + + + M+ R
Sbjct: 472 PLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQER 531
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF--- 459
GL P+ +TY+GL+ GY G +E A +++ + + V Y L+ Y K ++
Sbjct: 532 GLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKV 591
Query: 460 --------------------------------DCALKLLNEMKDVGVQPNVDEYNKLIQS 487
+ A ++L+ ++ G P+V Y+ LI
Sbjct: 592 SSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISG 651
Query: 488 LCLKALDWRTAEKLLEDMRLKGLHLN 513
LC K D A +L++M KG+ N
Sbjct: 652 LC-KTADREKAFGILDEMSKKGVDPN 676
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 135/316 (42%), Gaps = 3/316 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI SK+G+ + + + F + + G + N+ TY I + + A + ++M++
Sbjct: 506 NSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLD 565
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
TG P+ ++ + K ++ + ++ + + LI +L ++
Sbjct: 566 TGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSG-NME 624
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A +L + +SS+I LC+ D A +L +M +G P +N++I
Sbjct: 625 AAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALI 684
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
K+GD++ A + + ++GL P+ TYT L+ G G + A + NE
Sbjct: 685 DGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGIT 744
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
Y L G + + A+ L+ EM G ++ +N L+ C + T K
Sbjct: 745 PDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETL-K 802
Query: 501 LLEDMRLKGLHLNGIT 516
LL + +GL N +T
Sbjct: 803 LLHVIMGRGLVPNALT 818
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 124/307 (40%), Gaps = 16/307 (5%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ + A ++ + G N Y I R A + +KM + LPD
Sbjct: 446 GEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCY 505
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLD 327
+I K G+ +E+ + +E+ + P + + LI + + +L MLD
Sbjct: 506 NSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLD 565
Query: 328 DFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAY 383
+KP + ++ S + D+ + M+ +G N ++ +I
Sbjct: 566 T--------GLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNL 617
Query: 384 SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
S +G+M A +L + G PDV+ Y+ L+SG E+A IL+E K +
Sbjct: 618 SSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNI 677
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
V Y+ LI G CK + A + N + G+ PN Y LI C K D A L
Sbjct: 678 VCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSC-KVGDISNAFYLYN 736
Query: 504 DMRLKGL 510
+M G+
Sbjct: 737 EMLATGI 743
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/343 (20%), Positives = 129/343 (37%), Gaps = 54/343 (15%)
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
F D G + + Y I LS + A+ V + + GS+PD +IS C
Sbjct: 594 TFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLC 653
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
K ++A + +K + P LI LC+ + + A ++ + +
Sbjct: 654 KTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGD-ISYARNVFNSILAKGLVPNC 712
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV----------------------- 375
++S+I C++ D+ A L ++M++ G P V
Sbjct: 713 VTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEE 772
Query: 376 -----------FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
FN+++ + K G M +++L ++ RGL P+ T ++SG + G++
Sbjct: 773 MFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKL 832
Query: 425 EEACEILNEAKK------------------NHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
E I E ++ N ++ +IR +CK D AL L
Sbjct: 833 SEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLR 892
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
+ + Y ++ +LC K A LL++M +G
Sbjct: 893 DVIVAKSAPMGCSSYLAIVDNLCRKG-KLSEALNLLKEMDKRG 934
>gi|255660854|gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 139/280 (49%), Gaps = 4/280 (1%)
Query: 239 IEALSRRKIFDWAWSVCEKMIET--GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREK 296
I+ + RK D A V E ++ET + D ++ + + G ++A + L ++
Sbjct: 36 IQVVVSRKGKDSASDVFEAILETKGTQISDFYVFSGLMIAYLESGFVRDAVQCFRLTKQH 95
Query: 297 KMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHG 356
K+ P ++ L E KL D + ++ F+ +++ C+ ++
Sbjct: 96 KIRVPFDTCRKVLEHL-MEFRYFKLVWDFYKEVLECGYPASLYFFNILMQRFCKEGEMRL 154
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A+++ + G P FN++I+ Y K GD+ + M + G +PDVYTY+ L++
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILIN 214
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
G G+++EA E+ NE N + VT+ TLI G+CK E+ D A+++ +M G+ P
Sbjct: 215 GLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSP 274
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++ YN LI LC K + + L+++M + GL + I+
Sbjct: 275 DLITYNTLIYGLCKKG-ELKQVHDLIDEMIMNGLKPDKIS 313
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 130/284 (45%), Gaps = 18/284 (6%)
Query: 235 YYFTI--EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTL 292
Y+F I + + A SV + + + G P +I+ + K G E + +
Sbjct: 137 YFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSA 196
Query: 293 AREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKP----FSSVI 345
P + LI+ LC+E DE +L +MLD+ + P F+++I
Sbjct: 197 MHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDN--------GLVPNGVTFTTLI 248
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
C+ + V A + +M+S+G P +N++I K G++ +++ M GLK
Sbjct: 249 HGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLK 308
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
PD +YT L+ G G +E A E+ N+ + RL V Y LI C+ A K+
Sbjct: 309 PDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKM 368
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
L EM VG++P+ Y +I C K D +TA KLL +M+ G
Sbjct: 369 LREMLSVGLKPDNGTYTMIINEFC-KKRDSKTASKLLREMQRDG 411
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 164/363 (45%), Gaps = 14/363 (3%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L++ + S GK +++ + E K + + + L+ + + G + A + F
Sbjct: 34 SLIQVVVSRKGKDSASDVFEAILET--KGTQISDFYVFSGLMIAYLESGFVRDAVQCFRL 91
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ +T +E L + F W ++++E G ++ FCK G+
Sbjct: 92 TKQHKIRVPFDTCRKVLEHLMEFRYFKLVWDFYKEVLECGYPASLYFFNILMQRFCKEGE 151
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAF--LISS---LCQEDETVKLALDMLDDFSGEARKYA 337
+ A V+ + + P SVV+F LI+ L DE +L M +
Sbjct: 152 MRLAQSVFDAITKWGLRP--SVVSFNTLINGYIKLGDLDEGFRLKSAM----HASGAQPD 205
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+ +S +I LC+ + A L ++M+ G P F ++I + K + AME+ K
Sbjct: 206 VYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYK 265
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M S+GL PD+ TY L+ G G++++ ++++E N + ++Y TLI G CK
Sbjct: 266 QMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEG 325
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITR 517
+ + AL+L N+M ++ + Y LI LC + AEK+L +M GL + T
Sbjct: 326 DLEIALELRNKMIQESIRLDDVAYTALISCLCREG-RAGDAEKMLREMLSVGLKPDNGTY 384
Query: 518 ALI 520
+I
Sbjct: 385 TMI 387
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 131/299 (43%), Gaps = 2/299 (0%)
Query: 180 LWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI 239
+WD KE+ E ++ N L+ F K G+ + A VF+ +G + ++ I
Sbjct: 120 VWDFYKEVLECGYPA-SLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLI 178
Query: 240 EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
+ D + + M +G+ PD +I+ CK GK EA+ ++ + +
Sbjct: 179 NGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLV 238
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P LI C+ +E V LA+++ + + ++++I LC+ ++
Sbjct: 239 PNGVTFTTLIHGHCK-NEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHD 297
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
L+ +MI G P + ++I K GD+ A+E+ M ++ D YT L+S
Sbjct: 298 LIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLC 357
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G+ +A ++L E + TY +I +CK + A KLL EM+ G P V
Sbjct: 358 REGRAGDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPVPGV 416
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 1/208 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K GK A E+FN+ D G V N T+ I + + D A + ++M+ G
Sbjct: 212 LINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQG 271
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD +I CK G+ K+ H + + P + LI C+E + +++A
Sbjct: 272 LSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGD-LEIA 330
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
L++ + E+ + ++++I LCR A+ +L +M+S G P N + +I+
Sbjct: 331 LELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKMLREMLSVGLKPDNGTYTMIINE 390
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ K D A ++L+ M+ G P V T
Sbjct: 391 FCKKRDSKTASKLLREMQRDGPVPGVVT 418
>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 733
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 153/336 (45%), Gaps = 6/336 (1%)
Query: 186 EIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRR 245
+I E E V+T N LI + L + + A E+ + GC ++ +YY + L +
Sbjct: 231 QIVEIEPNVITY---NCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKE 287
Query: 246 KIFDWAWSVCEKMI-ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSV 304
K + EKM+ ++ LPD + K G EA A E++ +
Sbjct: 288 KRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVG 347
Query: 305 VAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM 364
+ ++ S C+E K A +++++ + + ++SVI LC+ + V AK +L +M
Sbjct: 348 YSAIVHSFCREGRMDK-AKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQM 406
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
G P + ++++ K G+ A EM+ + P+ TY+ LM G+ G+
Sbjct: 407 YKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKS 466
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
EAC+++ E K +PV + LI+ C+ E+ D A + + + + G NV + +
Sbjct: 467 SEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTV 526
Query: 485 IQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
I C K D A LL+DM L H + +T I
Sbjct: 527 IHGFCQKD-DLEAALSLLDDMYLSNKHPDVVTYTTI 561
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 136/287 (47%), Gaps = 3/287 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
++ F + G+ A E+ N+ GC+ + TY I L + + D A + +M + G
Sbjct: 351 IVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHG 410
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P++ +++ CK G + EA + ++ E P + L+ +E ++ + A
Sbjct: 411 CKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSE-A 469
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
D++ + + + +I+SLC+ + V AK + + ++ G F +VI
Sbjct: 470 CDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHG 529
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ + D+ A+ +L M PDV TYT ++ G++EEA ++ + + +
Sbjct: 530 FCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPT 589
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
PVTY T+I YC++ + LKLL +M + Q YN++I+ LC
Sbjct: 590 PVTYRTVIHQYCRMGRVEDLLKLLEKM--LSRQECRTAYNQVIEKLC 634
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 12/207 (5%)
Query: 301 PQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTL 360
P+ V A L Q DE V L D R I + +++ L + K GAK +
Sbjct: 101 PRQVCAVL---QLQTDERVALRFFYWADRQWRYRHDPI-VYYAMLEILSKTKLCQGAKRV 156
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
L M F V+ +YS+AG + AM +L +M+ G++PD+ +
Sbjct: 157 LRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVM 216
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
G ++++A L + + +TY+ LI+GYC L + A++L+ EM G P+
Sbjct: 217 GNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKIS 276
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRL 507
Y ++ LC EK ++++RL
Sbjct: 277 YYTVMGFLC--------KEKRIKEVRL 295
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 3/158 (1%)
Query: 334 RKYAIKP--FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
R+ +P F V+ S R + A +L+ M G P ++ N+ I +
Sbjct: 163 RRIERRPEAFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDK 222
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
A+ L+ M+ ++P+V TY L+ GY + ++E+A E++ E ++Y+T++
Sbjct: 223 AVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMG 282
Query: 452 GYCKLEEFDCALKLLNEM-KDVGVQPNVDEYNKLIQSL 488
CK + L+ +M KD + P+ YN + L
Sbjct: 283 FLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHML 320
>gi|302763305|ref|XP_002965074.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
gi|300167307|gb|EFJ33912.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
Length = 484
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 137/312 (43%), Gaps = 6/312 (1%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V N ++ + LG+ A F K G C N TY I L + DWA +
Sbjct: 114 VTAYNVVLKGYCDLGRVGRALIKFGKMGK-TCKPNVATYNTVINGLCKFGKIDWAVHLFT 172
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
++ PD ++ C+ + + A VY + E + C+E
Sbjct: 173 RLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKE- 231
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD-VHGAKTLLSKMISEGPPPGNAV 375
V AL++L K ++ ++ +I +C+ K+ + A L +M+ PP
Sbjct: 232 RRVDEALEVLKTMIQRRCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVT 291
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+ ++I SK ++ +E+ K M GL PD Y Y L+ + +++EA IL +A
Sbjct: 292 YGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAA 351
Query: 436 KNHSRLSPVTYHTLIRGYCKLEE--FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
+NH Y TLI GYC+ + D AL L MKD V PNV YN +++ LC K
Sbjct: 352 RNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVITYNIVLRGLC-KTG 410
Query: 494 DWRTAEKLLEDM 505
+ A ++ ++M
Sbjct: 411 RFDEAYQIFQEM 422
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 2/183 (1%)
Query: 308 LISSLCQEDETVKLALDMLDDFS-GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
L+ S+ + ++ LA D S E ++ + ++ ++ L R + A + +
Sbjct: 13 LVGSVIRRVPSLALARKFFDWSSKQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELC 72
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
P F +I + + A L MRS G+ PDV Y ++ GY + G++
Sbjct: 73 AHCRPSLYSFTIIIQCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGR 132
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A + K + + TY+T+I G CK + D A+ L + V P+ Y+ L+
Sbjct: 133 ALIKFGKMGKT-CKPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVH 191
Query: 487 SLC 489
LC
Sbjct: 192 GLC 194
>gi|259489858|ref|NP_001159344.1| uncharacterized protein LOC100304439 [Zea mays]
gi|223943533|gb|ACN25850.1| unknown [Zea mays]
Length = 322
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 119/295 (40%), Gaps = 37/295 (12%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A EVFN+ +GC E Y ++AL F A+ + +M G PD ++
Sbjct: 29 AVEVFNRLPRFGCPQTTEVYNALLDALCANGNFTGAYKLLRRMARKGVAPDRATFSTLVD 88
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
+C GK +EA LDD +G +
Sbjct: 89 SWCAAGKLQEAQA------------------------------------FLDDMAGRGLR 112
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
++ ++ L R + AK +M EG P A FNS+ A AGD+ A+ +
Sbjct: 113 PPVRGRDLLVDGLVRAGHLEQAKAFALRMTKEGILPDVATFNSLAEALCNAGDVDFAVSL 172
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
L SRGL PD+ TY ++ A G++EEA + A ++ R P Y +I+ CK
Sbjct: 173 LADASSRGLCPDISTYKVMLPAVAKVGKIEEAFRLFYAAVEDGHRPFPSLYAAIIKALCK 232
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
F A +MK G PN Y L++ +C++ + A L +M G
Sbjct: 233 AGRFADAFAFFGDMKTKGHPPNRPVYVMLVK-MCVRGGRFVEAANYLVEMSEAGF 286
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 10/129 (7%)
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
MR GL T++ ++S Y + ++A E+ N + + Y+ L+ C
Sbjct: 1 MRGLGLPLSPTTFSAVISSYGHSRLPDQAVEVFNRLPRFGCPQTTEVYNALLDALCANGN 60
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH------- 511
F A KLL M GV P+ ++ L+ S C A + A+ L+DM +GL
Sbjct: 61 FTGAYKLLRRMARKGVAPDRATFSTLVDSWC-AAGKLQEAQAFLDDMAGRGLRPPVRGRD 119
Query: 512 --LNGITRA 518
++G+ RA
Sbjct: 120 LLVDGLVRA 128
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 153/361 (42%), Gaps = 14/361 (3%)
Query: 156 VTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKA 215
V + V++ LLK +C + K + DI+ + + V N L+ F + +
Sbjct: 127 VNNIVINQLLKGLCDA---KRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEE 183
Query: 216 AFEVFNKFGD---YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGK 272
A E+ + D C N +Y I D A+++ +M++ G P+
Sbjct: 184 ALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTT 243
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS---SLCQEDETVKLALDMLDDF 329
+I CK A V+ +K + P LI S+ + E V+ ML++
Sbjct: 244 VIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVR----MLEEM 299
Query: 330 SGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
S K + S++ LC A+ MI +G P A++ +I Y+ G +
Sbjct: 300 SAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGAL 359
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
+ ++L LM GL PD + + + + YA ++EA I N+ K+ V + L
Sbjct: 360 SEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGAL 419
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
I CKL D A+ N+M + GV PN+ +N L+ LC W A++ +M +G
Sbjct: 420 IDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLC-TVDKWEKAKEFYFEMLNQG 478
Query: 510 L 510
+
Sbjct: 479 I 479
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 146/349 (41%), Gaps = 29/349 (8%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+LL +C++ +E +D + G K V I LI ++ G ++ N
Sbjct: 313 SLLNYLCNNGRCREARFFFDSMIRKGIKPN----VAIYGILIHGYATKGALSEMHDLLNL 368
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ G + + A +++ + D A + KM + G PD G +I CK G+
Sbjct: 369 MVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGR 428
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP-- 340
+A + + + + P V L+ LC D+ K +F E I+P
Sbjct: 429 VDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAK-----EFYFEMLNQGIRPDV 483
Query: 341 --FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
F++++ +LC V A+ L+ M G P + ++I + G + A + L +
Sbjct: 484 VFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDV 543
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M S GLKPD +TY L+ GY G++++A + E +N VTY T++ G
Sbjct: 544 MLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRR 603
Query: 459 FDCALKLLNEMKDVGVQPN----------------VDEYNKLIQSLCLK 491
F A +L M G Q N VDE KL QSLC K
Sbjct: 604 FSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSK 652
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/397 (20%), Positives = 163/397 (41%), Gaps = 70/397 (17%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ LLK C+ +E L ++ + + V + F++ G+ A+ +F
Sbjct: 169 NTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTE-GQVDKAYNLFL 227
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV----------- 270
+ D G N TY I+ L + ++ D A V ++MI+ G PD++
Sbjct: 228 EMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIG 287
Query: 271 ------------------------GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVA 306
G ++++ C G+ +EA + K + P ++
Sbjct: 288 KWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYG 347
Query: 307 FLI------SSLCQEDETVKLALD---------------------MLDD---FSGEARKY 336
LI +L + + + L ++ M+D+ + ++
Sbjct: 348 ILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQ 407
Query: 337 AIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
+ P F ++I +LC++ V A ++M++EG P VFNS++ A
Sbjct: 408 GLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKA 467
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
E M ++G++PDV + ++ GQ+ +A +++ ++ +R ++Y TLI G
Sbjct: 468 KEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGG 527
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+C + D A K L+ M VG++P+ YN L+ C
Sbjct: 528 HCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYC 564
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/308 (20%), Positives = 127/308 (41%), Gaps = 18/308 (5%)
Query: 190 KEKGVLTVEILN--ELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKI 247
K++G L+ +++N LI KLG+ A FN+ + G N + + L
Sbjct: 405 KQQG-LSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDK 463
Query: 248 FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF 307
++ A +M+ G PD I+ C G+ +A + L P
Sbjct: 464 WEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTT 523
Query: 308 LISSLC---QEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTL 360
LI C + DE K +LD++ +KP +++++ CR + A +
Sbjct: 524 LIGGHCLVGRIDEAAK-SLDVM-------LSVGLKPDEWTYNTLLHGYCRAGRIDDAYGV 575
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
+M+ G PG +++++ + A E+ M + G + +++ Y +++G +
Sbjct: 576 FREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSK 635
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
++EA ++ +L T++ +I K + A+ L + G+ P+V
Sbjct: 636 NNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFT 695
Query: 481 YNKLIQSL 488
Y + ++L
Sbjct: 696 YCLIAENL 703
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 87/206 (42%), Gaps = 7/206 (3%)
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
D A + M+ G PD ++ +C+ G+ +A+ V+ + P + +
Sbjct: 535 DEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTI 594
Query: 309 ISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI 365
+ L E +L L+M+ +++ I ++ ++ L + V A L +
Sbjct: 595 LHGLFTTRRFSEAKELYLNMIT----SGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLC 650
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
S+ FN +I A K+G AM + + S GL PDV+TY + G +E
Sbjct: 651 SKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLE 710
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIR 451
E ++ + +K+ + + + L+R
Sbjct: 711 EFDDLFSAMEKSGTTPNSRMLNALVR 736
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 75/162 (46%), Gaps = 15/162 (9%)
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM---TPAMEMLKLMRSRGLK-------P 406
A L +++ P FN +++A S+ T E++ + +R ++ P
Sbjct: 33 ALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKVTP 92
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK-L 465
D+ TY+ L+ + G++E K+ R++ + + L++G C + A+ L
Sbjct: 93 DLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDIL 152
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRL 507
+ M ++G P+V YN L++ C + + AE+ LE + +
Sbjct: 153 IKRMPELGCTPDVVSYNTLLKGFC----NEKRAEEALELLHM 190
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 136/285 (47%), Gaps = 12/285 (4%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL-PDSEK 269
G+ A + ++ + G Q TY ++ + ++ A ++ KM E + P+
Sbjct: 198 GRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVI 257
Query: 270 VGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDML 326
II CK G+ +A ++T +EK ++P +I C + +L +ML
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317
Query: 327 DDFSGEARKYA--IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
+ RK + + ++++I + + A L +M+ G P +NS+I +
Sbjct: 318 E------RKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFC 371
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV 444
K + A +M LM ++G PDV+T+T L+ GY ++++ E+L+E + + V
Sbjct: 372 KQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTV 431
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
TY+TLI G+C + + + AL L +M GV P++ N L+ LC
Sbjct: 432 TYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLC 476
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 142/319 (44%), Gaps = 5/319 (1%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N LI F K A F K G + T+ + L A +M
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMF 176
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
ET P+ +++ C+ G+ EA + E + P Q ++ +C++ +TV
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236
Query: 320 KLALDMLDDFSGEARKYA-IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
AL++L + + +S++I SLC+ A+ L ++M +G P +NS
Sbjct: 237 S-ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I + +G + A ++L+ M R + PDV TY L++ + G+ EA E+ +E
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRG 355
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC-LKALDWRT 497
+ +TY+++I G+CK + D A + M G P+V + LI C K +D
Sbjct: 356 IIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRID--D 413
Query: 498 AEKLLEDMRLKGLHLNGIT 516
+LL +M +GL N +T
Sbjct: 414 GMELLHEMPRRGLVANTVT 432
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 149/346 (43%), Gaps = 20/346 (5%)
Query: 156 VTSG-VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGK 214
+T G +VD + K K + + ++++++ E + V I + +I K G+
Sbjct: 220 ITYGTIVDGMCK-------KGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHS 272
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
A +F + + G + TY I + A + ++M+E PD +I
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR 334
+ F K GK EA +Y + + P +I C++D + A DM + +
Sbjct: 333 NAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR-LDAAEDMFYLMATKGC 391
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
+ F+++I C K + LL +M G +N++I + GD+ A++
Sbjct: 392 SPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALD 451
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP----------- 443
+ + M S G+ PD+ T L+ G + G++++A E+ +K+ L
Sbjct: 452 LSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDV 511
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+TY+ LI G +F A +L EM G+ P+ Y+ +I LC
Sbjct: 512 LTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 557
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 117/292 (40%), Gaps = 26/292 (8%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
E+ ++ G VAN TY I + A + ++MI +G PD ++
Sbjct: 414 GMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 473
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
C GK K+A ++ ++ KM LD F+G
Sbjct: 474 GLCDNGKLKDALEMFKAMQKSKM-----------------------DLDASHPFNGVEPD 510
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+ ++ +I L A+ L +M G P ++S+I K + A +M
Sbjct: 511 --VLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 568
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
M S+ P+V T+ L++GY G++++ E+ E + + Y TLI G+ K
Sbjct: 569 FVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRK 628
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRL 507
+ + AL + EM GV P+ ++ K + A +LED+++
Sbjct: 629 VGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKE-ELERAVAMLEDLQM 679
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 2/174 (1%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
I F+ +I+ C + A + K+ G P F +++ ++ A++
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFH 173
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M +P+V T+T LM+G G++ EA +L+ ++ + + +TY T++ G CK
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233
Query: 458 EFDCALKLLNEMKDVG-VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+ AL LL +M++V + PNV Y+ +I SLC K A+ L +M+ KG+
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLC-KDGRHSDAQNLFTEMQEKGI 286
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 1/184 (0%)
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A+D+ D ++ F ++ + RM+ +L KM + FN +I
Sbjct: 63 AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIK 122
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
+ + A+ + GL PDV T+T L+ G ++ EA + ++ + R
Sbjct: 123 CFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRP 182
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+ VT+ TL+ G C+ A+ LL+ M + G+QP Y ++ +C K D +A L
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG-DTVSALNL 241
Query: 502 LEDM 505
L M
Sbjct: 242 LRKM 245
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 71/172 (41%), Gaps = 5/172 (2%)
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+K + A L S M+ P P F ++ + + + + M + ++ D+Y+
Sbjct: 57 IKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYS 116
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
+ L+ + + ++ A + K VT+ TL+ G C + AL ++M
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMF 176
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAE--KLLEDMRLKGLHLNGITRALI 520
+ +PNV + L+ LC + R E LL+ M GL IT I
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREG---RIVEAVALLDRMMEDGLQPTQITYGTI 225
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 135/285 (47%), Gaps = 12/285 (4%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL-PDSEK 269
G+ A + ++ + G NQ TY ++ + + A ++ KM E + P+
Sbjct: 191 GRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVI 250
Query: 270 VGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDML 326
II K G+ +A +++ +EK + P +I+ C E +L +M
Sbjct: 251 YSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMF 310
Query: 327 DDFSGEARKYA--IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
+ RK + + FS +I +L + A+ L ++M+ G P +NS+I +S
Sbjct: 311 E------RKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFS 364
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV 444
K + A M LM ++G PDV T++ L+ GY ++++ ++L+E + + +
Sbjct: 365 KQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTI 424
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
TY TLI G+C+L + AL LL EM GV PNV N L+ LC
Sbjct: 425 TYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLC 469
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 109/262 (41%), Gaps = 25/262 (9%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G VAN TY I + + A + ++MI +G P+ ++ C GK K+A
Sbjct: 418 GLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDA 477
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
++ + ++ KM S +D + + Y I +I
Sbjct: 478 LEMFKVMQKSKMDLDAS--------------------HPFNDVEPDVQTYNI-----LIC 512
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
L A+ L +M G P +NSVI K + A +M M S+G P
Sbjct: 513 GLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSP 572
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
DV T+T L++GY G++ + E+ E + + +TY TLI G+C++ + AL +
Sbjct: 573 DVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIF 632
Query: 467 NEMKDVGVQPNVDEYNKLIQSL 488
EM GV P+ ++ L
Sbjct: 633 QEMISSGVYPDTITIRNMLTGL 654
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 158/370 (42%), Gaps = 26/370 (7%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
L+ +C E AL D + E G + + I++ + K+G +A + K
Sbjct: 182 TLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM----CKMGDTVSALNLLRK 237
Query: 223 FGDYGCV-ANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ + N Y I+ L + A ++ +M E G P+ +I+ FC G
Sbjct: 238 MEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSG 297
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP- 340
+ EA + E+KM P + LI++L +E + + ++ E I P
Sbjct: 298 RWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEA-----EELYNEMLPRGIIPN 352
Query: 341 ---FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
++S+I + + A+ + M ++G P F+ +I Y A + M++L
Sbjct: 353 TITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLH 412
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M RGL + TYT L+ G+ G + A ++L E + + VT +TL+ G C
Sbjct: 413 EMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNG 472
Query: 458 EFDCALKLLNEMKDV-----------GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
+ AL++ M+ V+P+V YN LI L + + AE+L E+M
Sbjct: 473 KLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGL-INEGKFSEAEELYEEMP 531
Query: 507 LKGLHLNGIT 516
+GL + IT
Sbjct: 532 HRGLVPDTIT 541
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 89/185 (48%), Gaps = 16/185 (8%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
I F+ +I+ C + A + K+ G P F++++ ++ A+
Sbjct: 111 IYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFH 170
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
+ KP+V +T LM+G G++ EA +L+ ++ + + +TY T++ G CK+
Sbjct: 171 QI----CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMG 226
Query: 458 EFDCALKLLNEMKDVG-VQPNVDEYNKLIQSLCLKALDWR-----TAEKLLEDMRLKGLH 511
+ AL LL +M++V ++PNV Y+ +I L W+ A+ L +M+ KG+
Sbjct: 227 DTVSALNLLRKMEEVSRIKPNVVIYSAIIDGL------WKDGRQTDAQNLFSEMQEKGIS 280
Query: 512 LNGIT 516
N T
Sbjct: 281 PNLFT 285
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 71/172 (41%), Gaps = 9/172 (5%)
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+K + A L M+ P P F ++ + + + + M R + ++Y+
Sbjct: 54 IKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYS 113
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
+T L+ + + ++ A + K S VT+ TL+ G C + AL +++
Sbjct: 114 FTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI- 172
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAE--KLLEDMRLKGLHLNGITRALI 520
+PNV + L+ LC + R E LL+ M GL N IT I
Sbjct: 173 ---CKPNVIAFTTLMNGLCREG---RVVEAVALLDRMVEDGLQPNQITYGTI 218
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 133/295 (45%), Gaps = 8/295 (2%)
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
G Y C N +Y I+ + D A+ + ++MI G PD +I CK
Sbjct: 195 GGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAM 254
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLC---QEDETVKLALDMLDDFSGEARKYAIKP 340
+A + +K + P +I C Q +E V+L L SG + +
Sbjct: 255 NKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRL----LKKMSGSGLQPDVVT 310
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+ +I+ C++ A+++ M+ +G P + +++ ++ Y+ G + ++L LM
Sbjct: 311 YILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMI 370
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G+ + + L+ YA G +++A E ++N R V+Y T+I CK+ +
Sbjct: 371 RDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVE 430
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
A+ N+M G+ PN+ + LI LC +W+ E+L +M +G+H + I
Sbjct: 431 DAVYHFNQMVSEGLSPNIISFTSLIHGLCSIG-EWKKVEELAFEMINRGIHPDAI 484
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 131/291 (45%), Gaps = 9/291 (3%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I F K G+ A+ +F++ G + TY I+ L + + + A ++ + M + G
Sbjct: 209 IIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKG 268
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+P++ +I +C G+ +EA + + P LI C+ +
Sbjct: 269 VMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCK----IGRC 324
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGA----KTLLSKMISEGPPPGNAVFNS 378
+ F RK KP S++ L GA + LL MI +G P + FN
Sbjct: 325 AEARSVFDSMVRK-GQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNI 383
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I AY+K G + AM MR GL+PDV +Y+ ++ G++E+A N+
Sbjct: 384 LICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEG 443
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ +++ +LI G C + E+ +L EM + G+ P+ N ++ +LC
Sbjct: 444 LSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLC 494
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 130/288 (45%), Gaps = 14/288 (4%)
Query: 232 QETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYT 291
+ I A ++ D A + +M + G PD +I CK G+ ++A +
Sbjct: 378 HRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFN 437
Query: 292 LAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVI 345
+ + P ++++F LI LC E K+ ++ + E I P ++++
Sbjct: 438 QMVSEGLSP--NIISFTSLIHGLCSIGEWKKV-----EELAFEMINRGIHPDAIFMNTIM 490
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
+LC+ V A+ +I G P +N++I Y G M +++ M S GL+
Sbjct: 491 DNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLR 550
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
PD +TY L++GY G++E+A + E + + +T + ++ G + A +L
Sbjct: 551 PDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAAREL 610
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
+M D G Q ++ YN ++ LC + A ++ ED+R K L+
Sbjct: 611 YMKMVDRGTQLRIETYNTVLGGLCENSC-VDEALRMFEDLRSKEFELD 657
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 106/229 (46%), Gaps = 9/229 (3%)
Query: 270 VGKIISWFCKGGKAKEA-HVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDM 325
+ ++I C G + +A +V+ E P LI LC E E ++L L M
Sbjct: 132 LNQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHM 191
Query: 326 LDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSK 385
D G + +S++I + +V A L +MI +G PP ++S+I K
Sbjct: 192 TAD-GGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCK 250
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP-- 443
A M A +L+ M +G+ P+ TY ++ GY + GQ+EEA +L K + S L P
Sbjct: 251 AQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLK--KMSGSGLQPDV 308
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
VTY LI+ YCK+ A + + M G +PN Y+ L+ K
Sbjct: 309 VTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKG 357
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 108/271 (39%), Gaps = 59/271 (21%)
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSV-------------------------- 344
SL +ED AL++ D+ +AR ++ F+SV
Sbjct: 27 SLGRED-----ALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNT 81
Query: 345 -------------------IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSK 385
IR C + + A + + G N N +I
Sbjct: 82 MARSGVNMMAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCD 141
Query: 386 AGDMTPAMEML-KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS-RLSP 443
AM+M+ + M G PDV++Y L+ G + +EA E+L + SP
Sbjct: 142 GKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSP 201
Query: 444 --VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
V+Y T+I G+ K E D A L +EM G P+V Y+ LI LC KA AE +
Sbjct: 202 NVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLC-KAQAMNKAEAI 260
Query: 502 LEDMRLKGLHLNGIT-RALIR---AVKELEE 528
L+ M KG+ N T +IR ++ +LEE
Sbjct: 261 LQHMFDKGVMPNTRTYNIMIRGYCSLGQLEE 291
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 122/295 (41%), Gaps = 17/295 (5%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEK--EKGVLTVEI-LNELIALFSKLGKGKAAFEV 219
+L+ +CS +G+ W V+E+ + +G+ I +N ++ K G+ A +
Sbjct: 453 SLIHGLCS-IGE------WKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDF 505
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
F+ G N +Y I+ D + ++M+ G PDS +++ + K
Sbjct: 506 FDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFK 565
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV---KLALDMLDDFSGEARKY 336
G+ ++A +Y K + ++ L Q V +L + M+D +
Sbjct: 566 NGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVD----RGTQL 621
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
I+ +++V+ LC V A + + S+ FN VI+A K G + A +
Sbjct: 622 RIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLF 681
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
M RG P V TY+ ++ G +EE+ ++ +KN + +IR
Sbjct: 682 SAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIR 736
>gi|449457845|ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
gi|449484609|ref|XP_004156929.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
Length = 501
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 153/341 (44%), Gaps = 40/341 (11%)
Query: 179 ALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFT 238
L D +KE EK +T +IL + + ++ K + VF+K D+ C +++Y
Sbjct: 100 TLLDRMKE----EKIDVTEDILLSICRAYGRIHKPLDSIRVFHKMQDFHCKPTEKSYI-- 153
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
SV ++E L K A Y R+ +
Sbjct: 154 --------------SVLAILVEENQL-------------------KSAFRFYRDMRKMGI 180
Query: 299 YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
P + + LI + C+ T+ A+ + S + + ++I LCR + + AK
Sbjct: 181 PPTVTSLNVLIKAFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAK 240
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
LL +M ++G P + S+I + ++ AM +L+ M+ + ++P+V+TY+ LM G+
Sbjct: 241 ELLQEMETKGCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGF 300
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G A +IL + R + ++Y TL+ G C + + AL++ + MK G +P+
Sbjct: 301 CKTGHSSRARDILELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDA 360
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRAL 519
Y K++ LC ++ A L++M L G+ N IT +L
Sbjct: 361 GLYGKIVNCLC-DVSRFQEAANFLDEMVLCGIKPNRITWSL 400
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 130/318 (40%), Gaps = 14/318 (4%)
Query: 196 TVEILNELIALFSK-LGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSV 254
TV LN LI F K G A +F ++GC + TY I L R + A +
Sbjct: 183 TVTSLNVLIKAFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKEL 242
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
++M G P II C+ EA + ++K + P + L+ C+
Sbjct: 243 LQEMETKGCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCK 302
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
+ + A D+L+ + + + +S+++ LC ++ A + +M +G P
Sbjct: 303 TGHSSR-ARDILELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAG 361
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD-------VYTYTGLMSGYANGGQMEEA 427
++ +++ A L M G+KP+ V T+ ++ G A
Sbjct: 362 LYGKIVNCLCDVSRFQEAANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCTINNSNRA 421
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
++ ++ T+++L++ +C ++ ++L+EM G P + ++ ++
Sbjct: 422 FQLYLSVLTRGISITVDTFNSLLKCFCNKKDLPKTSRILDEMVINGCIPQGEMWSTMVNC 481
Query: 488 LC--LKALDWRTAEKLLE 503
C KA D A KLL+
Sbjct: 482 FCDERKACD---AMKLLQ 496
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 125/318 (39%), Gaps = 13/318 (4%)
Query: 157 TSGVVDALLKAICSSVGKKE-VYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKA 215
T ++ L+KA C + G + L+ + G + ++N L S +
Sbjct: 183 TVTSLNVLIKAFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIV----E 238
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A E+ + GC + TY I L + D A + E M + P+ ++
Sbjct: 239 AKELLQEMETKGCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMD 298
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
FCK G + A + L +K++ P + L++ LC E + + AL++ D + K
Sbjct: 299 GFCKTGHSSRARDILELMIQKRLRPNMISYSTLLNGLCNEGK-INEALEIFDRMKLQGFK 357
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF-------NSVISAYSKAGD 388
+ ++ LC + A L +M+ G P + N VI +
Sbjct: 358 PDAGLYGKIVNCLCDVSRFQEAANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCTINN 417
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHT 448
A ++ + +RG+ V T+ L+ + N + + IL+E N + T
Sbjct: 418 SNRAFQLYLSVLTRGISITVDTFNSLLKCFCNKKDLPKTSRILDEMVINGCIPQGEMWST 477
Query: 449 LIRGYCKLEEFDCALKLL 466
++ +C + A+KLL
Sbjct: 478 MVNCFCDERKACDAMKLL 495
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 91/212 (42%), Gaps = 5/212 (2%)
Query: 302 QSVVAFLISSLCQEDETVKLALDMLDDFSGE---ARKYAIKPFSSVIRSLCRMKDVHGAK 358
++V + L Q + +K AL + D + E K+ + FS +I L A+
Sbjct: 40 KTVTPTHVQQLIQAERDIKKALIIFDSATAEYANGFKHDLNTFSLMISKLISANQFRLAE 99
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
TLL +M E + S+ AY + ++ + M+ KP +Y +++
Sbjct: 100 TLLDRMKEEKIDVTEDILLSICRAYGRIHKPLDSIRVFHKMQDFHCKPTEKSYISVLAIL 159
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE-EFDCALKLLNEMKDVGVQPN 477
Q++ A + +K + + + LI+ +CK D A+ L M + G +P+
Sbjct: 160 VEENQLKSAFRFYRDMRKMGIPPTVTSLNVLIKAFCKNSGTMDKAMHLFRTMSNHGCEPD 219
Query: 478 VDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
Y LI LC + A++LL++M KG
Sbjct: 220 SYTYGTLINGLC-RFRSIVEAKELLQEMETKG 250
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 148/323 (45%), Gaps = 33/323 (10%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI F +LG +AF V K G N T I+ L
Sbjct: 101 NILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLN--------------- 145
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
GKI C GK K+A ++ + + P L+ C+E VK
Sbjct: 146 ----------GKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGR-VK 194
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A ++L + K + ++S++ +K V+ AK++ + M G P ++ +I
Sbjct: 195 EAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILI 254
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ + K M AME+LK M + + P+V TY+ L+ G G++ A ++++E H R
Sbjct: 255 NGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEM---HDR 311
Query: 441 LSP---VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
P VTY +++ CK + D A+ LL +MK+ G+QPN+ Y LI+ LC ++
Sbjct: 312 GQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLC-QSGKLED 370
Query: 498 AEKLLEDMRLKGLHLNGITRALI 520
A K+ ED+ +KG +LN T ++
Sbjct: 371 ARKVFEDLLVKGHNLNVYTYTVM 393
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 132/299 (44%), Gaps = 18/299 (6%)
Query: 235 YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR 294
Y+ T D A S+ ++++ P + + KI+ K +K H V L++
Sbjct: 30 YFSTSTTFHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVK---SKHYHTVLYLSQ 86
Query: 295 E---KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRM 351
+ + + P LI+S CQ + A +L K +++I+ LC
Sbjct: 87 KMEFRGIKPNLVNCNILINSFCQLGH-IPSAFSVLTKILKMGYKPNTITLNTLIKGLCLN 145
Query: 352 KDVHG----------AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+H A L +KMI E P F ++ + K G + A +L +M
Sbjct: 146 GKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMI 205
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
+G+KP V TY LM GY Q+ +A I N + +Y LI G+CK++ D
Sbjct: 206 QGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDE 265
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
A++LL EM + PNV Y+ LI LC K+ A KL+++M +G N +T + I
Sbjct: 266 AMELLKEMHHKQIIPNVVTYSSLIDGLC-KSGKISYALKLVDEMHDRGQPPNIVTYSSI 323
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 131/286 (45%), Gaps = 1/286 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
L+ F K G+ K A V G TY ++ K + A S+ M + G
Sbjct: 183 LVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLG 242
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD + +I+ FCK EA + K++ P + LI LC+ + + A
Sbjct: 243 VSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGK-ISYA 301
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
L ++D+ + I +SS++ +LC+ V A LL++M ++G P + +I
Sbjct: 302 LKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKG 361
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
++G + A ++ + + +G +VYTYT ++ G+ + G +EA +L++ + N +
Sbjct: 362 LCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPN 421
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
TY +I K +E + A KLL EM + V N LI S+
Sbjct: 422 AKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLIASI 467
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 86/181 (47%), Gaps = 11/181 (6%)
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
P+ S + DV A +L ++++ + P P N FN ++ + K+ + + + M
Sbjct: 29 PYFSTSTTFHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKM 88
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC---KL 456
RG+KP++ L++ + G + A +L + K + + +T +TLI+G C K+
Sbjct: 89 EFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKI 148
Query: 457 EEFDC-------ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
+ C A+ L N+M + P+V + L+ C K + A+ +L M ++G
Sbjct: 149 HDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFC-KEGRVKEAKNVLAMMMIQG 207
Query: 510 L 510
+
Sbjct: 208 I 208
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 148/327 (45%), Gaps = 36/327 (11%)
Query: 168 ICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYG 227
+C + ++ + L+ +K +G V T IL I F K G + A +F + G
Sbjct: 467 LCHATKVEKAFLLFQEMKMVGVTPD-VYTYTIL---IDSFCKAGLIEQAQWLFEEMRSVG 522
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH 287
C TY I A + K A + +M++ G P+ G ++ CK G +A
Sbjct: 523 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 582
Query: 288 VVY------TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
VY + + + Y P C++ T LA +++ +
Sbjct: 583 EVYAKLIGTSDSADSDFYFP-----------CEDRHT--LAPNVV-------------TY 616
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+++ LC+ V A LL M+S G P + V++++I + KAG + A E+ M
Sbjct: 617 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 676
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G P V+TYT L+ G+++ A ++L++ K+ + VTY +I G C++ E +
Sbjct: 677 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 736
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSL 488
ALKLL+ M++ G PNV Y LI L
Sbjct: 737 ALKLLSLMEEKGCSPNVVTYTALIDGL 763
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 126/317 (39%), Gaps = 11/317 (3%)
Query: 181 WDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIE 240
W ++ E+E L + +I+ + A ++ C+ N TY +
Sbjct: 260 WADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLS 319
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP 300
++K W + M+ G P+ ++ +C A+ + P
Sbjct: 320 GFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPP 379
Query: 301 PQSVVAFLISSLC-QEDETVKLALDMLDDFSGEA-------RKYAIKPFSSVIRSLCRMK 352
V I S+C QE LD+ + GE K + F+ R LC +
Sbjct: 380 GYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFA---RCLCGVG 436
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT 412
A L+ +M+ +G P + ++ VI+ A + A + + M+ G+ PDVYTYT
Sbjct: 437 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYT 496
Query: 413 GLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
L+ + G +E+A + E + + VTY LI Y K ++ A + + M D
Sbjct: 497 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 556
Query: 473 GVQPNVDEYNKLIQSLC 489
G +PN Y L+ LC
Sbjct: 557 GCRPNDVTYGALVDGLC 573
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 151/335 (45%), Gaps = 14/335 (4%)
Query: 183 IVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEAL 242
+++EIGE+++ VL +LN L+ + G A E + D+G ++ TY ++ L
Sbjct: 161 LLREIGEEDREVLG-RLLNVLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVL 219
Query: 243 SRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQ 302
S D + V ++M E+G D VG CK G+ +A + E++ +
Sbjct: 220 SSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMI----EREDFKLD 275
Query: 303 SVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLS 362
+V+ + S E A+ L + + + +++ + K + K +++
Sbjct: 276 TVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIIN 335
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG 422
M++EG P ++FNS++ +Y D A ++L M + G P Y + G G
Sbjct: 336 MMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYN-IFIGSICGQ 394
Query: 423 QMEEACEILNEAKKNHSR-------LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
+ + ++L+ A+K + L+ V R C + +FD A +L+ EM G
Sbjct: 395 EKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFV 454
Query: 476 PNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
P+ Y+K+I LC A A L ++M++ G+
Sbjct: 455 PDTSTYSKVITFLC-HATKVEKAFLLFQEMKMVGV 488
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 145/354 (40%), Gaps = 54/354 (15%)
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH 287
CV N+ L FD A+ + ++M+ G +PD+ K+I++ C K ++A
Sbjct: 418 CVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAF 477
Query: 288 VVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRS 347
+++ + + P LI S C+ ++ A + ++ + ++++I +
Sbjct: 478 LLFQEMKMVGVTPDVYTYTILIDSFCKAG-LIEQAQWLFEEMRSVGCSPTVVTYTALIHA 536
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML-KLMRS----- 401
+ K V A + +M+ G P + + +++ KAG+++ A E+ KL+ +
Sbjct: 537 YLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSAD 596
Query: 402 ----------RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
L P+V TY L+ G +++ A E+L+ + + + Y LI
Sbjct: 597 SDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALID 656
Query: 452 GYCKLEE-----------------------------------FDCALKLLNEMKDVGVQP 476
G+CK + D A+K+L++M P
Sbjct: 657 GFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTP 716
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAVKELEED 529
NV Y +I LC + + A KLL M KG N +T ALI + + +D
Sbjct: 717 NVVTYTAMIDGLC-RIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGQSWQD 769
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 99/244 (40%), Gaps = 17/244 (6%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
TV LI + K + A ++F++ D GC N TY ++ L + A+ V
Sbjct: 526 TVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVY 585
Query: 256 EKMIETGSLPDSE----------------KVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
K+I T DS+ G ++ CK K AH +
Sbjct: 586 AKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCE 645
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P V LI C+ + + A ++ + ++ ++S+I + + + A
Sbjct: 646 PNHIVYDALIDGFCKAGK-IDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 704
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
+LS+M+ + P + ++I + G+ A+++L LM +G P+V TYT L+ G
Sbjct: 705 VLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLG 764
Query: 420 NGGQ 423
Q
Sbjct: 765 QSWQ 768
>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 701
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 151/326 (46%), Gaps = 7/326 (2%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
E++ ++ FS++G+ A + + G + T +E + ++A +V ++
Sbjct: 148 EVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDE 207
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M G +PDS ++ + GK +EA T ++ P + ++++LC E+
Sbjct: 208 MSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALC-ENG 266
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
V A+ K + F+S+I LC+ + A +L +M+ G P
Sbjct: 267 LVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHT 326
Query: 378 SVISAYSKAGDMTPAMEM-LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
++I K G A + LKL+RS KP+V+TYT ++ GY ++ A + + K+
Sbjct: 327 ALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKE 386
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ TY TLI G+CK F A +L+N M D G PN+ YN I SLC K+ R
Sbjct: 387 QGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKS---R 443
Query: 497 TAE--KLLEDMRLKGLHLNGITRALI 520
E +LL GL +G+T ++
Sbjct: 444 APEAYELLNKAFSCGLEADGVTYTIL 469
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 110/263 (41%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G + + T + AL + + A KMI+ G P+ +I CK G K+A
Sbjct: 247 GFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQA 306
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
+ P LI LC+ T K L + K + ++S+I
Sbjct: 307 FEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIG 366
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
C+ ++ A+ L S+M +G P + ++I+ + KAG A E++ LM G P
Sbjct: 367 GYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMP 426
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
++YTY + + EA E+LN+A VTY LI+ CK + + AL
Sbjct: 427 NIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFF 486
Query: 467 NEMKDVGVQPNVDEYNKLIQSLC 489
M G + ++ N LI + C
Sbjct: 487 CRMNKTGFEADMRLNNILIAAFC 509
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 129/312 (41%), Gaps = 35/312 (11%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
LI K G K AFE+ + G N T+ I+ L +R + A+ + K++
Sbjct: 290 FTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLV 349
Query: 260 ETGSL-PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE--- 315
+ + P+ +I +CK K A ++++ +E+ ++P + LI+ C+
Sbjct: 350 RSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSF 409
Query: 316 -----------DE-------TVKLALDMLDDFSGEARKYAI--KPFSS-----------V 344
DE T A+D L S Y + K FS +
Sbjct: 410 GRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTIL 469
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
I+ C+ D++ A +M G + N +I+A+ + M + + +L+ S GL
Sbjct: 470 IQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGL 529
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
P TYT ++S Y G ++ A + + K++ TY +LI G CK D A K
Sbjct: 530 IPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACK 589
Query: 465 LLNEMKDVGVQP 476
L M D G+ P
Sbjct: 590 LYEAMIDRGLSP 601
>gi|224143015|ref|XP_002324819.1| predicted protein [Populus trichocarpa]
gi|222866253|gb|EEF03384.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 145/315 (46%), Gaps = 11/315 (3%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCV-ANQETYYFTIEALSRRKIFDWAWSV 254
T N LI + GK + + ++ G V N TY + A +K AW+V
Sbjct: 117 TTSTYNTLIKGYGIAGKPEESVKLLELMSQEGNVKPNLRTYNVLVRAWCNKKRITEAWNV 176
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
KMI +G PD I + + + G +A V + + P + ++S C+
Sbjct: 177 VYKMIASGIQPDVVTYNTIATAYAQKGALDQAEGVILEMQNNGVQPNERTCGIIMSGYCK 236
Query: 315 EDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
E ++ AL F+ ++ I P F+S+I+ + D G +L+ M G
Sbjct: 237 EGR-IREALR----FAYRMKELGIHPNLVIFNSLIKGFVAIMDRDGVDEVLNLMEEFGVK 291
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P F+++++A+S AG M E+ M G++PD + Y+ L GY + E+A E+
Sbjct: 292 PDVITFSTIMNAWSTAGFMEKCREIFDDMVKAGIEPDAHAYSILAKGYVRAQEPEKAEEL 351
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
L K+ + + V + T+I G+C + D A+++ ++M G+ PN+ + LI
Sbjct: 352 LTTMIKSGFQPNVVIFTTVISGWCSAGKMDYAVRVFDKMCQRGISPNLKTFETLIWGFAE 411
Query: 491 KALDWRTAEKLLEDM 505
W+ AE++L+ M
Sbjct: 412 ARQPWK-AEEILQIM 425
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 159/325 (48%), Gaps = 21/325 (6%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
TV +L+ + GK + A +F + G + +Y + AL+ +K FD +S+
Sbjct: 12 TVRSRTKLMNFLVEKGKPQEAESIFYSLIEGGHKPSLISYTTLLAALTMQKRFDSIYSII 71
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSL--- 312
++ E G PDS +I+ F + G + A + +E M P S LI
Sbjct: 72 SQVEENGMNPDSIFFNAVINAFSESGNMESAMETFWKMQENGMKPTTSTYNTLIKGYGIA 131
Query: 313 CQEDETVKLALDMLDDFSGEAR-KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
+ +E+VKL L+ S E K ++ ++ ++R+ C K + A ++ KMI+ G P
Sbjct: 132 GKPEESVKL----LELMSQEGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIASGIQP 187
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+N++ +AY++ G + A ++ M++ G++P+ T +MSGY G++ EA
Sbjct: 188 DVVTYNTIATAYAQKGALDQAEGVILEMQNNGVQPNERTCGIIMSGYCKEGRIREALRFA 247
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
K+ + V +++LI+G+ + + D ++LN M++ GV+P+V ++ ++ +
Sbjct: 248 YRMKELGIHPNLVIFNSLIKGFVAIMDRDGVDEVLNLMEEFGVKPDVITFSTIMNA---- 303
Query: 492 ALDWRTA------EKLLEDMRLKGL 510
W TA ++ +DM G+
Sbjct: 304 ---WSTAGFMEKCREIFDDMVKAGI 325
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 101/191 (52%), Gaps = 6/191 (3%)
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
K ++ +++++ +L K +++S++ G P + FN+VI+A+S++G+M A
Sbjct: 43 GHKPSLISYTTLLAALTMQKRFDSIYSIISQVEENGMNPDSIFFNAVINAFSESGNMESA 102
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLI 450
ME M+ G+KP TY L+ GY G+ EE+ ++L E + P TY+ L+
Sbjct: 103 METFWKMQENGMKPTTSTYNTLIKGYGIAGKPEESVKLL-ELMSQEGNVKPNLRTYNVLV 161
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK-ALDWRTAEKLLEDMRLKG 509
R +C + A ++ +M G+QP+V YN + + K ALD AE ++ +M+ G
Sbjct: 162 RAWCNKKRITEAWNVVYKMIASGIQPDVVTYNTIATAYAQKGALD--QAEGVILEMQNNG 219
Query: 510 LHLNGITRALI 520
+ N T +I
Sbjct: 220 VQPNERTCGII 230
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 154/355 (43%), Gaps = 35/355 (9%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
++ +K+ K +F+K + G + ++ I R F A ++ KM+
Sbjct: 618 FTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMM 677
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE-- 317
+ G P +G +++ FC+G + +EA + E + P + +I+ LC+ +
Sbjct: 678 KLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLN 737
Query: 318 ----------------------TVKLALDMLDDFSGEAR------KYAIKP----FSSVI 345
T+ L ++ AR K I P F+++I
Sbjct: 738 NALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 797
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
+ + ++ AK L +MI P +NS+I+ + G + A M LM S+G
Sbjct: 798 DTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCF 857
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
PDV TY L++G+ ++E+ ++ E TY+TLI GYC+ + + A K+
Sbjct: 858 PDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 917
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
N M D GV P++ YN L+ LC A ++ED++ + ++ IT +I
Sbjct: 918 FNRMVDCGVPPDIVTYNILLDCLCNNG-KIEKALVMVEDLQKNQMDVDIITYNII 971
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 157/376 (41%), Gaps = 19/376 (5%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+LL C +E +L D + E+G + V I N +I K A E+F
Sbjct: 690 SLLNGFCQGNRFQEAVSLVDSMAELGLEPN----VVIYNTVINGLCKNRDLNNALEIFYG 745
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G VA+ TY I L + A + M++ P+ +I F K G
Sbjct: 746 MEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGN 805
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
EA +Y + ++P LI+ C + + A M D + + ++
Sbjct: 806 LLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGR-LGDAKHMFDLMVSKGCFPDVVTYN 864
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
++I C+ K V L +M +G +N++I Y +AG + A ++ M
Sbjct: 865 TLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDC 924
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G+ PD+ TY L+ N G++E+A ++ + +KN + +TY+ +I+G C+ ++ A
Sbjct: 925 GVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEA 984
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL------------ 510
L + GV+ + Y +I LC L R A+KL M+ G
Sbjct: 985 WCLFRSLTRKGVKLDAIAYITMISGLCRNGLR-READKLCTRMKEDGFMPSERIYDETLR 1043
Query: 511 -HLNGITRALIRAVKE 525
H ++ LI+AV E
Sbjct: 1044 DHYTSLSAELIKAVHE 1059
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 129/316 (40%), Gaps = 3/316 (0%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYG-CVANQETYYFTIEALSRRKIFDWAWSV 254
V + N LI K G A E+ N+ G A+ TY + L + A +
Sbjct: 169 NVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARI 228
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
M + PD +I F K G EA +Y + + P LI+ LC
Sbjct: 229 LRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCM 288
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
A D + + + ++++I C+ + V L +M EG
Sbjct: 289 HGRLYH-AKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTF 347
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
+N++I Y + G + A ++ M S G+ PD+ T+ L+ G G++ A N+
Sbjct: 348 TYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDM 407
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
+ L V Y+ +I G CK ++ + A +L + GV+P+ Y +I LC K
Sbjct: 408 RSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLC-KNGP 466
Query: 495 WRTAEKLLEDMRLKGL 510
R A++L M+ G+
Sbjct: 467 RREADELFRRMKEDGI 482
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 131/294 (44%), Gaps = 7/294 (2%)
Query: 231 NQETYYFTI--EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHV 288
+ + Y FTI R A S+ KM++ G P G ++ FC + +A
Sbjct: 97 SHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFS 156
Query: 289 VYTLAREKKMYPPQSVV-AFLISSLCQEDETVKLALDMLDDFSGEARKYA-IKPFSSVIR 346
+ + K Y P VV LI LC+ + V +AL++L++ + R A + +++++
Sbjct: 157 LVA-SMVKSGYEPNVVVYNTLIDCLCKNGD-VNIALELLNEMEKKGRLAADLVTYNTLLT 214
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
LC + A +L M P F ++I A+ K G++ A E+ K M + P
Sbjct: 215 GLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGP 274
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
+ TY L++G G++ A + + + VTY+TLI G+CK + +KL
Sbjct: 275 NTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLF 334
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
M G+ + YN LI C + R A+ + M G+ + IT ++
Sbjct: 335 QRMYREGLVGDTFTYNTLIHGYC-QVGKLRVAKDIFSWMVSCGVTPDIITHCIL 387
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 107/247 (43%), Gaps = 5/247 (2%)
Query: 248 FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF 307
FD A+ + +M+++ +P ++++ K K V+Y + + + + +F
Sbjct: 596 FDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDI--VIYLFHKMENLGISHDLYSF 653
Query: 308 --LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI 365
LI C+ LAL +L + +I S++ C+ A +L+ M
Sbjct: 654 TILIHCFCRCSR-FSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMA 712
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
G P ++N+VI+ K D+ A+E+ M +G+ D TY L+SG N G+
Sbjct: 713 ELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWT 772
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
+A +L + K + + + LI + K A L EM V PN+ YN LI
Sbjct: 773 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLI 832
Query: 486 QSLCLKA 492
C++
Sbjct: 833 NGFCIQG 839
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 1/153 (0%)
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A L +M+ P P F +++A + + + M G+ D+Y++T L+
Sbjct: 49 ALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIH 108
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
+ ++ A IL + K S VT+ +L+ G+C A L+ M G +P
Sbjct: 109 CFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEP 168
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
NV YN LI LC K D A +LL +M KG
Sbjct: 169 NVVVYNTLIDCLC-KNGDVNIALELLNEMEKKG 200
>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
Length = 991
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 148/326 (45%), Gaps = 6/326 (1%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
L++ +C + +E L+ ++K G V LI+ K G+ A +F+
Sbjct: 259 LIQGLCEAKCVREALVLFLMMKRDGCSPN----VRAFTFLISGLCKSGRVGDARLLFDAM 314
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
G V + TY I S+ + A + E M + G PD +I C K
Sbjct: 315 PQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KT 373
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
+EA + A ++ P LI+ C E AL M + K ++ F
Sbjct: 374 EEAEELLNNAVKEGFTPTVVTFTNLINGYCMA-EKFDDALRMKNKMMSSKCKLDLQVFGK 432
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
+I SL + + AK LL+++ + G P + S+I Y K+G + A+E+LK+M G
Sbjct: 433 LINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDG 492
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
+P+ +TY LM G ++ +A +L + +K+ + +TY TL++G C +FD A
Sbjct: 493 CQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF 552
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLC 489
+L M+ G++P+ Y L +LC
Sbjct: 553 RLFEMMEQNGLKPDEHAYAVLTDALC 578
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 130/297 (43%), Gaps = 17/297 (5%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A + + G + + Y F + +L+R + ++ V ++++ G LPD+ +I
Sbjct: 132 AIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIK 191
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA--LDMLDDFSGEA 333
+CK G AH + L E + P L+ C+ E K M+ +
Sbjct: 192 SYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQR 251
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
+Y+ ++ +I+ LC K V A L M +G P F +IS K+G + A
Sbjct: 252 NEYS---YTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDAR 308
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
+ M G+ P V TY ++ GY+ G+M +A +I +KN TY+TLI G
Sbjct: 309 LLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGL 368
Query: 454 C--KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLK 508
C K EE A +LLN G P V + LI C+ AEK + +R+K
Sbjct: 369 CDQKTEE---AEELLNNAVKEGFTPTVVTFTNLINGYCM-------AEKFDDALRMK 415
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 122/283 (43%), Gaps = 4/283 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I + K GK A EV GC N TY + L + K A ++ KM + G
Sbjct: 468 IIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDG 527
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+P+ ++ C A ++ + + + P + A L +LC+ +
Sbjct: 528 IIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAY 587
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++ + Y ++++I + + A TL+ +MI EG P + ++ ++ A
Sbjct: 588 SFIVRKGVALTKVY----YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHA 643
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
K + A+ +L M RG+K ++ YT L+ G+ + A + NE + + S
Sbjct: 644 LCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPS 703
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
TY I YCK + A L+ +M+ GV P+V YN LI
Sbjct: 704 ATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILI 746
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 143/343 (41%), Gaps = 26/343 (7%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGV-LTVEILNELIALFSKLGKGKAAFEVFNK 222
L A+C + +E Y+ IV+ KGV LT LI FSK G A + +
Sbjct: 573 LTDALCKAGRAEEAYSF--IVR------KGVALTKVYYTTLIDGFSKAGNTDFAATLIER 624
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
D GC + TY + AL ++K + A + ++M G +I + GK
Sbjct: 625 MIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGK 684
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
A +Y P + I+S C+E ++ A D++ E + ++
Sbjct: 685 HDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGR-LEDAEDLILKMEREGVAPDVVTYN 743
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS-------AYSKAGDMTPAMEM 395
+I M + A + L +M+ P + ++ AY ++ D + +
Sbjct: 744 ILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNL 803
Query: 396 LKL---------MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
++L M GL P V TY+ L++G+ G++EEAC +L+ + Y
Sbjct: 804 IELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIY 863
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
LI+ C + F+ AL ++ M + G QP ++ Y L+ LC
Sbjct: 864 TLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLC 906
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 144/348 (41%), Gaps = 34/348 (9%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIG----EKEKGVLTVEILNELIALFSKLGKGKAAFE 218
LL+ C + L++++++ G E VLT + K G+ + A+
Sbjct: 537 TLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDAL--------CKAGRAEEAYS 588
Query: 219 VFNKFGDYGCVANQETYYFT-IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
+ G VA + YY T I+ S+ D+A ++ E+MI+ G PDS ++
Sbjct: 589 FIVRKG----VALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHAL 644
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
CK + EA + + + LI + +E + A M ++ + K +
Sbjct: 645 CKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKH-DHAKRMYNEMTSSGHKPS 703
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
++ I S C+ + A+ L+ KM EG P +N +I G + A LK
Sbjct: 704 ATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLK 763
Query: 398 LMRSRGLKPDVYTYTGLM----------------SGYANGGQMEEACEILNEAKKNHSRL 441
M +P+ +TY L+ SG N +++ ++L K+
Sbjct: 764 RMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNP 823
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ TY +LI G+CK + A LL+ M G+ PN D Y LI+ C
Sbjct: 824 TVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCC 871
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 141/332 (42%), Gaps = 11/332 (3%)
Query: 192 KGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWA 251
K L +++ +LI K + K A E+ N+ G V N TY I+ + D A
Sbjct: 422 KCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIA 481
Query: 252 WSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISS 311
V + M G P++ ++ K K +A + T ++ + P L+
Sbjct: 482 LEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQG 541
Query: 312 LCQE---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
C E D +L +M++ + ++A ++ + +LC+ A + + + +G
Sbjct: 542 QCDEHDFDNAFRL-FEMMEQNGLKPDEHA---YAVLTDALCKAGRAEEAYSFI---VRKG 594
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
+ ++I +SKAG+ A +++ M G PD YTY+ L+ ++ EA
Sbjct: 595 VALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEAL 654
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
IL++ + + Y LI + + D A ++ NEM G +P+ Y I S
Sbjct: 655 PILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSY 714
Query: 489 CLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
C K AE L+ M +G+ + +T ++
Sbjct: 715 C-KEGRLEDAEDLILKMEREGVAPDVVTYNIL 745
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 116/288 (40%), Gaps = 4/288 (1%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+ K K A + K G + N TY ++ FD A+ + E M +
Sbjct: 501 NSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQ 560
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD + CK G+A+EA Y+ K + + LI + T
Sbjct: 561 NGLKPDEHAYAVLTDALCKAGRAEEA---YSFIVRKGVALTKVYYTTLIDGFSKAGNT-D 616
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A +++ E +S ++ +LC+ K ++ A +L +M G + +I
Sbjct: 617 FAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILI 676
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ G A M M S G KP TYT ++ Y G++E+A +++ + ++
Sbjct: 677 DEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVA 736
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
VTY+ LI G + D A L M +PN Y L++ L
Sbjct: 737 PDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHL 784
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 86/230 (37%), Gaps = 17/230 (7%)
Query: 189 EKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKI- 247
E+E V N LI +G AF + C N TY ++ L + +
Sbjct: 731 EREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLA 790
Query: 248 ---------------FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTL 292
D W + E+M++ G P +I+ FCK G+ +EA ++
Sbjct: 791 YVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDH 850
Query: 293 AREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMK 352
K + P + + LI C + + + AL + S + ++ + ++ LC
Sbjct: 851 MCGKGLSPNEDIYTLLIKCCC-DTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEG 909
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
D K+L ++ G + + KAG + +ML +M R
Sbjct: 910 DFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKR 959
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 147/320 (45%), Gaps = 6/320 (1%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V N+++ LG + A + ++ +GC + TY F + L R + D A+++
Sbjct: 250 VNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLG 309
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
++ E + + +I GK A +Y + K P L+ LC+
Sbjct: 310 RVPEVNVV----MLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLG 365
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
A+ MLD+ + I +S+++ S CR A+ +L +M ++G + +
Sbjct: 366 RCGS-AVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGY 424
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N +I A K G + AM +++ M+S+G KPD+ TY ++ N QM+EA I +
Sbjct: 425 NGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLE 484
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ +TY+TLI + L+L NEM G +V YN LI++LC K +
Sbjct: 485 EGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALC-KEGNVD 543
Query: 497 TAEKLLEDMRLKGLHLNGIT 516
+ LLE+M KG+ N +
Sbjct: 544 RSMMLLEEMMTKGIKPNNFS 563
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 160/381 (41%), Gaps = 39/381 (10%)
Query: 151 CFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEI----------GEKEKGVLT---- 196
C VT G LL+ +C + E YA+ V E+ G +G L
Sbjct: 281 CTPSVVTYGF---LLRGLCRTRQADEAYAMLGRVPEVNVVMLNTVIRGCLAEGKLARATE 337
Query: 197 -------------VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALS 243
V N L+ KLG+ +A + ++ + GC N TY + +
Sbjct: 338 LYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFC 397
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS 303
R ++D A ++ ++M G +S+ II K GK EA + + + P
Sbjct: 398 RNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDIC 457
Query: 304 VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSK 363
+I LC D+ + A + + E ++++I +L L ++
Sbjct: 458 TYNTIIYHLCNNDQMDE-AEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANE 516
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
M+ G P +N +I A K G++ +M +L+ M ++G+KP+ ++Y L++ G+
Sbjct: 517 MVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGK 576
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
+ +A E+ E VTY+TLI G CK+ AL LL ++ + V P++ YN
Sbjct: 577 VRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNI 636
Query: 484 LIQSLCLKALDWRTAEKLLED 504
LI W +LL+D
Sbjct: 637 LIS--------WHCKVRLLDD 649
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 137/321 (42%), Gaps = 13/321 (4%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
+LG+ + A + +GCV + Y I AL + A ++ ++M+ G D
Sbjct: 190 LCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAAD 249
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC---QEDETVKLAL 323
++ C G +EA + P FL+ LC Q DE A
Sbjct: 250 VNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADE----AY 305
Query: 324 DMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAY 383
ML G + + ++VIR + A L M S+G PP +N ++
Sbjct: 306 AML----GRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGL 361
Query: 384 SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
K G A+ ML M +G P++ TY+ L+ + G ++A +L++ ++
Sbjct: 362 CKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNS 421
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
Y+ +I K + D A++L+ EMK G +P++ YN +I LC AE +
Sbjct: 422 QGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNND-QMDEAEHIFG 480
Query: 504 DMRLKGLHLNGIT-RALIRAV 523
++ +G+ NGIT LI A+
Sbjct: 481 NLLEEGVVANGITYNTLIHAL 501
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 83/207 (40%), Gaps = 32/207 (15%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F R+LCR+ A LL M G P ++ +VI A G + A +L M
Sbjct: 183 FGVAARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEML 242
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G DV T+ ++ G G + EA +++ + S VTY L+RG C+ + D
Sbjct: 243 LMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQAD 302
Query: 461 CALKLLNEMKDV-------------------------------GVQPNVDEYNKLIQSLC 489
A +L + +V G P+V YN L+ LC
Sbjct: 303 EAYAMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLC 362
Query: 490 LKALDWRTAEKLLEDMRLKGLHLNGIT 516
K +A ++L++M KG N +T
Sbjct: 363 -KLGRCGSAVRMLDEMEEKGCAPNIVT 388
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 9/173 (5%)
Query: 322 ALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLL-SKMISEGPPPGNAVF 376
AL +LD R++A+ P +++V+ +L R D H LL +M+ + PP F
Sbjct: 128 ALHLLDQMP---RRFAVTPSFRSYNAVLSTLAR-ADCHADALLLYRRMLRDRVPPTTFTF 183
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
A + G A+ +L+ M G PD Y ++ G + EA +L+E
Sbjct: 184 GVAARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLL 243
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
T++ ++ G C L A +L++ M G P+V Y L++ LC
Sbjct: 244 MGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLC 296
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 86/200 (43%), Gaps = 2/200 (1%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A +F + G VAN TY I AL + + +M+ G D +I
Sbjct: 475 AEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIK 534
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
CK G + ++ K + P LI+ LC+ + V+ AL++ + +
Sbjct: 535 ALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGK-VRDALELSKEMLNQGLT 593
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
I ++++I LC++ H A LL K+ +E P +N +IS + K + A +
Sbjct: 594 PDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASML 653
Query: 396 LKLMRSRGLKPDVYTYTGLM 415
L S G+ P+ T+ G+M
Sbjct: 654 LDKAVSGGIVPNERTW-GMM 672
>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
Length = 484
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 145/317 (45%), Gaps = 2/317 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N L+ + GK +A VF++ G T+ + + + + A ++ M
Sbjct: 117 FNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMA 176
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G PD G I CK G+ ++A ++ E+ + P V+ LI + C+E + V
Sbjct: 177 KAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGD-V 235
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
L++ + + K + +++++ CR++D+ A ++ +M +G P + ++
Sbjct: 236 TAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTL 295
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I K G++ AMEM + M G+ D TYT L+SG + G+ +A IL E +
Sbjct: 296 IDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGL 355
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
+ TY +I +CK + K L EM++ G P + YN ++ C + A+
Sbjct: 356 QPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLG-QMKNAD 414
Query: 500 KLLEDMRLKGLHLNGIT 516
LL M G+ N IT
Sbjct: 415 MLLNAMLNIGVCPNDIT 431
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 133/276 (48%), Gaps = 14/276 (5%)
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--L 308
A++ +++ G P++ + ++ + GK A V+ + + P +VV F L
Sbjct: 98 AYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQP--TVVTFNTL 155
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKM 364
+S +C+ + L+ + G K I P + + I+ LC+ + A + +M
Sbjct: 156 MSGMCKASD-----LNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEM 210
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
G P V ++I A+ K GD+T +E+ M +RG+K D+ Y L++G+ M
Sbjct: 211 CERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDM 270
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
+ A +I+ E +K+ + VTY TLI G CK E D A+++ EM D GV + Y L
Sbjct: 271 KAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTAL 330
Query: 485 IQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
I L KA AE++L +M GL + T ++
Sbjct: 331 ISGLS-KAGRSVDAERILCEMMEAGLQPDNTTYTMV 365
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 133/304 (43%), Gaps = 2/304 (0%)
Query: 206 LFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLP 265
L ++L A+ + D G + + + R A +V ++M+ G P
Sbjct: 88 LMNRLPSVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQP 147
Query: 266 DSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDM 325
++S CK A+ + L + + P I LC+ ++ A++M
Sbjct: 148 TVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGR-IQDAMEM 206
Query: 326 LDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSK 385
++ +++I + C+ DV L +M + G +N++++ + +
Sbjct: 207 FEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCR 266
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
DM A ++++ MR GLKPD TYT L+ G G+++ A E+ E L VT
Sbjct: 267 VRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVT 326
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
Y LI G K A ++L EM + G+QP+ Y +I + C K D +T K L++M
Sbjct: 327 YTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFC-KNGDVKTGFKHLKEM 385
Query: 506 RLKG 509
+ KG
Sbjct: 386 QNKG 389
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 83/202 (41%), Gaps = 36/202 (17%)
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
R+ V A ++ G PP FN ++ ++G + A + M RG++P V
Sbjct: 91 RLPSVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVV 150
Query: 410 TYTGLMSG--------------------------YANG---------GQMEEACEILNEA 434
T+ LMSG Y G G++++A E+ E
Sbjct: 151 TFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEM 210
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
+ + V TLI +CK + L+L EM GV+ ++ YN L+ C + D
Sbjct: 211 CERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFC-RVRD 269
Query: 495 WRTAEKLLEDMRLKGLHLNGIT 516
+ A ++E+MR GL + +T
Sbjct: 270 MKAANDIVEEMRKDGLKPDKVT 291
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 120/297 (40%), Gaps = 16/297 (5%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
A ++ +C + ++ +++ + E G V +L LI K G A E+ +
Sbjct: 189 AFIQGLCKTGRIQDAMEMFEEMCERGLNPNTV----VLTTLIDAHCKEGDVTAGLELRWE 244
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G A+ Y + R + A + E+M + G PD +I CK G+
Sbjct: 245 MATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGE 304
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP-- 340
A + ++ + LIS L + +V + E + ++P
Sbjct: 305 LDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDA-----ERILCEMMEAGLQPDN 359
Query: 341 --FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
++ VI + C+ DV L +M ++G PG +N V++ + G M A +L
Sbjct: 360 TTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNA 419
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
M + G+ P+ TY L+ G+ G++ + E L AK S Y +LI + K
Sbjct: 420 MLNIGVCPNDITYNILLDGHCKHGKVRDT-EELKSAKGMVSDFG--VYTSLINEFVK 473
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 135/308 (43%), Gaps = 4/308 (1%)
Query: 183 IVKEIGEKEKGVLTVEI-LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEA 241
+ +IGE+ G+L + N LI +G+ + ++ K + T+ I+A
Sbjct: 217 LCSQIGER--GILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDA 274
Query: 242 LSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPP 301
L + A V M + G PD ++ +C EA ++ ++ + P
Sbjct: 275 LCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPD 334
Query: 302 QSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLL 361
LI C+ + V A+ + + + I ++S+I LC + K LL
Sbjct: 335 VLNYNVLIDGYCKT-KMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLL 393
Query: 362 SKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG 421
+M PP +N +I A K G + A+ +L +M +G+KP++ TY +M GY
Sbjct: 394 DEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLR 453
Query: 422 GQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEY 481
+ A +I N K+ + Y+ LI GYCK E D A+ L EM+ + P++ Y
Sbjct: 454 NNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASY 513
Query: 482 NKLIQSLC 489
N LI LC
Sbjct: 514 NSLIDGLC 521
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 138/308 (44%), Gaps = 2/308 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI SK G+ KAA + + N Y I+ L + A +C ++ E G
Sbjct: 166 LINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERG 225
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
L D+ +I C G+ +E + T + + P LI +LC+E ++ A
Sbjct: 226 ILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILE-A 284
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+L S K I +++++ C ++VH A+ L ++M+ G P +N +I
Sbjct: 285 QGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDG 344
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y K + AM + K + ++ L P + +Y L+ G N G++ ++L+E +
Sbjct: 345 YCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPD 404
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
VTY+ LI CK AL +L M GV+PN+ YN ++ CL+ + A+ +
Sbjct: 405 VVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRN-NVNVAKDIF 463
Query: 503 EDMRLKGL 510
M GL
Sbjct: 464 NRMVKSGL 471
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 144/325 (44%), Gaps = 12/325 (3%)
Query: 169 CSSVGK-KEVYALWD-IVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDY 226
C SVG+ +EV L +V+E + + N LI K G+ A V
Sbjct: 240 CCSVGRWQEVTQLLTKMVRENVDPDD-----YTFNILIDALCKEGRILEAQGVLAMMSKR 294
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G + TY +E R+ A + +M++ G PD +I +CK EA
Sbjct: 295 GEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEA 354
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
V++ K + P + LI LC + +LD+ G A+ + ++ +I
Sbjct: 355 MVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVK-KLLDEMHGSAQPPDVVTYNILID 413
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
+LC+ + A +L M+ +G P +N+++ Y ++ A ++ M GL+P
Sbjct: 414 ALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEP 473
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALK 464
D+ Y L++GY ++EA + E + H L P +Y++LI G C L +
Sbjct: 474 DILNYNVLINGYCKTEMVDEAIVLFKEMR--HKNLIPDIASYNSLIDGLCNLGRIPHVQE 531
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLC 489
LL+EM D G P+V YN L+ + C
Sbjct: 532 LLDEMCDSGQSPDVITYNILLDAFC 556
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 163/361 (45%), Gaps = 11/361 (3%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ A+C E + ++ + GEK + N L+ + A E+FN
Sbjct: 269 NILIDALCKEGRILEAQGVLAMMSKRGEKPD----IVTYNALMEGYCSRENVHEARELFN 324
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ G + Y I+ + K+ D A + +++ +P +I C G
Sbjct: 325 RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
+ +HV L P VV + LI +LC+E ++ AL +L + K I
Sbjct: 385 RI--SHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILE-ALGVLVMMMKKGVKPNIV 441
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
+++++ C +V+ AK + ++M+ G P +N +I+ Y K + A+ + K M
Sbjct: 442 TYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEM 501
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
R + L PD+ +Y L+ G N G++ E+L+E + +TY+ L+ +CK + F
Sbjct: 502 RHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPF 561
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRAL 519
D A+ L ++ + G+ P+ + ++ +LC K + AE L+ + + G N T +
Sbjct: 562 DKAISLFRQIVE-GIWPDFYTNHAIVDNLC-KGEKLKMAEDALKHLLMHGCSPNVQTYTI 619
Query: 520 I 520
+
Sbjct: 620 L 620
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 107/246 (43%), Gaps = 1/246 (0%)
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS 303
R + D A + +M+ P + K++ + G A ++T + K + P +
Sbjct: 32 RFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIA 91
Query: 304 VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSK 363
LI+ + T A +L + + F+++I C + A
Sbjct: 92 TFTILINCYFHQSHTA-FAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
++++G + ++I+ SK G + A+ +L+ M ++P++ Y+ L+ G G
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
+ +A + ++ + L VTY++LI G C + + +LL +M V P+ +N
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270
Query: 484 LIQSLC 489
LI +LC
Sbjct: 271 LIDALC 276
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 46/201 (22%)
Query: 335 KYAIKPFSSVIRSL-----------CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAY 383
+YAI FS R CR ++V A T ++M+ PPP +VF+ ++ A
Sbjct: 6 RYAIPKFSISSRFFGHFQPQNPHKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAI 65
Query: 384 SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
+ G A+ + ++S+G+ P + T+T L++ Y + A +L K+ + +
Sbjct: 66 VRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNL 125
Query: 444 VTYHTLIRGYC-----------------------------------KLEEFDCALKLLNE 468
VT++T+I G+C K + AL LL E
Sbjct: 126 VTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQE 185
Query: 469 MKDVGVQPNVDEYNKLIQSLC 489
M+ VQPN+ Y+ LI LC
Sbjct: 186 MEKSSVQPNLVMYSALIDGLC 206
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 136/349 (38%), Gaps = 42/349 (12%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
++L+ +C+S V L D + + V N LI K G+ A V
Sbjct: 374 NSLIDGLCNSGRISHVKKLLDEMHGSAQPPD----VVTYNILIDALCKEGRILEALGVLV 429
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G N TY ++ R + A + +M+++G PD +I+ +CK
Sbjct: 430 MMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTE 489
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
EA V++ R K + P I +
Sbjct: 490 MVDEAIVLFKEMRHKNLIP------------------------------------DIASY 513
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+S+I LC + + + LL +M G P +N ++ A+ K A+ + + +
Sbjct: 514 NSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI-V 572
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+ PD YT ++ G +++ A + L + + TY LI CK F
Sbjct: 573 EGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGE 632
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
A+ LL++M+D P+ + +I L L+ + AEKL E+M +GL
Sbjct: 633 AMLLLSKMEDNDRPPDAITFEIIIGVL-LQRNETDKAEKLREEMIARGL 680
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 95/206 (46%), Gaps = 2/206 (0%)
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
PP SV L+ ++ + A+ + + +I F+ +I A +
Sbjct: 53 PPTSVFDKLLGAIVRMGH-YPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFS 111
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
LL+ ++ G P FN++I+ + G + A++ + + ++G D +TY L++G +
Sbjct: 112 LLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLS 171
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
GQ++ A +L E +K+ + + V Y LI G CK AL L +++ + G+ +
Sbjct: 172 KNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAV 231
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDM 505
YN LI C W+ +LL M
Sbjct: 232 TYNSLIDG-CCSVGRWQEVTQLLTKM 256
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/312 (18%), Positives = 121/312 (38%), Gaps = 37/312 (11%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+ ++L+ ++G A +F + G + T+ I + +A+S+ +
Sbjct: 57 VFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATI 116
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+++G P+ II+ FC G
Sbjct: 117 LKSGYQPNLVTFNTIINGFCING------------------------------------M 140
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+ ALD + + + + ++I L + + A LL +M P ++++
Sbjct: 141 IFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSA 200
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I K G ++ A+ + + RG+ D TY L+ G + G+ +E ++L + + +
Sbjct: 201 LIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVREN 260
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
T++ LI CK A +L M G +P++ YN L++ C + + A
Sbjct: 261 VDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRE-NVHEA 319
Query: 499 EKLLEDMRLKGL 510
+L M +GL
Sbjct: 320 RELFNRMVKRGL 331
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 136/290 (46%), Gaps = 2/290 (0%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
N TY I L R A SV + M+ G PD ++ CKG ++A +
Sbjct: 6 NAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELI 65
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
L R + P L+ +C E + V AL++L + K + +++V++ LC
Sbjct: 66 DLMRAEGCTPNNVTYNVLMDGMCGEGD-VDDALELLRNLPSHGCKPSTVNYNTVLKGLCS 124
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ A L+++M+ E PP A FN VI + + G + A+++L+ M G ++ T
Sbjct: 125 AERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVT 184
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
Y +++G ++ A +L++ K + VTY+TL++G C + A +L++ M
Sbjct: 185 YNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMT 244
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
G P+ +N LI LC K L A ++ + M KG N IT + I
Sbjct: 245 QNGCLPDNVTFNTLIGFLCQKGL-MVDAIEVFKQMPDKGCTPNSITYSTI 293
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 131/299 (43%), Gaps = 11/299 (3%)
Query: 211 GKG-KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEK 269
G+G + A E+ + GC N TY ++ + D A + + G P +
Sbjct: 55 GRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVN 114
Query: 270 VGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDF 329
++ C + +A + T + P ++ +I SLC++ ++ A+ +L+
Sbjct: 115 YNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKG-LLQQAIQLLEKM 173
Query: 330 SGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
S I ++++I LC ++V GA LLSKM S G P +N+++ A
Sbjct: 174 SKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARW 233
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
A E++ M G PD T+ L+ G M +A E+ + + +TY T+
Sbjct: 234 VDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTI 293
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL--CLKALDWRTAEKLLEDMR 506
I G K + D AL+L NEM G P +K+ Q L CL D T E+ ++ +R
Sbjct: 294 ISGLAKATKLDQALELFNEMGHKGFNP-----DKIYQLLAECLN--DDDTIEEAIQTVR 345
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 145/331 (43%), Gaps = 12/331 (3%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ LL+A C G ++ L D+++ G V N L+ G A E+
Sbjct: 46 NILLEATCKGRGYRQAMELIDLMRAEGCTPNNV----TYNVLMDGMCGEGDVDDALELLR 101
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+GC + Y ++ L + + A + +M+ P+ +I C+ G
Sbjct: 102 NLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKG 161
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
++A + L + K ++V + +I+ LC E V A+ +L K I
Sbjct: 162 LLQQA--IQLLEKMSKHGCTANIVTYNAIINGLC-EQRNVDGAMGLLSKMKSYGCKPDIV 218
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
++++++ LC A+ L+ M G P N FN++I + G M A+E+ K M
Sbjct: 219 TYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQM 278
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP-VTYHTLIRGYCKLEE 458
+G P+ TY+ ++SG A ++++A E+ NE H +P Y L +
Sbjct: 279 PDKGCTPNSITYSTIISGLAKATKLDQALELFNEM--GHKGFNPDKIYQLLAECLNDDDT 336
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ A++ + +++D G+ P+ YN ++ LC
Sbjct: 337 IEEAIQTVRKLQDSGISPHTVLYNAILLGLC 367
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 94/186 (50%), Gaps = 2/186 (1%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++ +I +LC V A ++L M+ G P +N ++ A K AME++ LMR
Sbjct: 10 YNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMR 69
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+ G P+ TY LM G G +++A E+L + + S V Y+T+++G C E +
Sbjct: 70 AEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWG 129
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RAL 519
A +L+ EM PN +N +I SLC K L + A +LLE M G N +T A+
Sbjct: 130 DADELVTEMLRENCPPNEATFNVVIYSLCRKGL-LQQAIQLLEKMSKHGCTANIVTYNAI 188
Query: 520 IRAVKE 525
I + E
Sbjct: 189 INGLCE 194
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 1/135 (0%)
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P +N +I + G + A+ +L M RG PDV TY L+ G +A E+
Sbjct: 5 PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMEL 64
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
++ + + VTY+ L+ G C + D AL+LL + G +P+ YN +++ LC
Sbjct: 65 IDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLC- 123
Query: 491 KALDWRTAEKLLEDM 505
A W A++L+ +M
Sbjct: 124 SAERWGDADELVTEM 138
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 113/289 (39%), Gaps = 43/289 (14%)
Query: 204 IALFSKLGKG--KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET 261
+ ++S KG + A ++ K +GC AN TY I L ++ D A + KM
Sbjct: 152 VVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSY 211
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
G PD ++ C + +A + + P LI LCQ+ L
Sbjct: 212 GCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQK----GL 267
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
+D ++ F +M +G P + ++++IS
Sbjct: 268 MVDAIEVF--------------------------------KQMPDKGCTPNSITYSTIIS 295
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
+KA + A+E+ M +G PD Y L + +EEA + + K S +
Sbjct: 296 GLAKATKLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVR--KLQDSGI 352
Query: 442 SP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
SP V Y+ ++ G C+ + + A+ ++ M G P+ Y LI+ L
Sbjct: 353 SPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGL 401
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 94/217 (43%), Gaps = 2/217 (0%)
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
A + +K YGC + TY ++ L + A + + M + G LPD+ +I
Sbjct: 200 GAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLI 259
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR 334
+ C+ G +A V+ +K P + +IS L + + + AL++ ++ G
Sbjct: 260 GFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATK-LDQALELFNEM-GHKG 317
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
K + + L + A + K+ G P ++N+++ + G A++
Sbjct: 318 FNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAID 377
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
++ M S G PD TY L+ G A G + EA E+L
Sbjct: 378 IMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELL 414
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 101/248 (40%), Gaps = 8/248 (3%)
Query: 157 TSGVV--DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGK 214
T+ +V +A++ +C L +K G K + N L+ +
Sbjct: 179 TANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPD----IVTYNTLLKGLCSAARWV 234
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
A E+ + GC+ + T+ I L ++ + A V ++M + G P+S II
Sbjct: 235 DAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTII 294
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR 334
S K K +A ++ K P + + L++ +D+T++ A+ +
Sbjct: 295 SGLAKATKLDQALELFNEMGHKGFNPDK--IYQLLAECLNDDDTIEEAIQTVRKLQDSGI 352
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
+++++ LCR A +++ M+S G P + + +I + G + A E
Sbjct: 353 SPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARE 412
Query: 395 MLKLMRSR 402
+L + SR
Sbjct: 413 LLIKLCSR 420
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
++P+ YTY L+ GQ+ +A +L++ VTY+ L+ CK + A+
Sbjct: 3 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
+L++ M+ G PN YN L+ +C + D A +LL ++ G
Sbjct: 63 ELIDLMRAEGCTPNNVTYNVLMDGMCGEG-DVDDALELLRNLPSHG 107
>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Brachypodium distachyon]
Length = 877
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 156/335 (46%), Gaps = 13/335 (3%)
Query: 156 VTSGVVDALLKAICSSVGKKEVYALWDIVKEI--GEKEKGVLTVEILNELIALFSKLGKG 213
+ + V+DAL K C S + V ++K++ G + +T + LI+ + G+
Sbjct: 366 IYNSVIDALCK--CRSASQALV-----VLKQMFAGGCDPDAIT---FSTLISGLCQEGRV 415
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
+ A + + + N +Y I R A ++ +M+E G PD G +
Sbjct: 416 QEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGAL 475
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEA 333
I G+ EA +V +++ P ++ LIS LC++ + + A +++++ +
Sbjct: 476 IHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKK-KMLPAARNLIEEMLEQN 534
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
++++I R + + A+ + M +G P +N++I Y + G M A+
Sbjct: 535 VHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAV 594
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
E + MR G PD +TYT L+ GYA G + A +L + K + + V Y +LI GY
Sbjct: 595 ECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGY 654
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
CKL + D A L M+ G+ PNV Y LI SL
Sbjct: 655 CKLGDTDAAECLFGSMESQGLFPNVITYTILIGSL 689
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 114/235 (48%), Gaps = 10/235 (4%)
Query: 308 LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
LI C+ + V + +L + + + + +++ L R D+ +LLS+M
Sbjct: 300 LIDGYCRRGD-VGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRER 358
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
PP ++NSVI A K + A+ +LK M + G PD T++ L+SG G+++EA
Sbjct: 359 RLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEA 418
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
+L E + + +Y +LI G+C E A LL EM + G P+V + LI
Sbjct: 419 ERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHG 478
Query: 488 LCL-----KALDWR---TAEKLLEDMRLKGLHLNGIT-RALIRAVKELEEDAIEN 533
L + +AL R A +LL D + + ++G+ + ++ A + L E+ +E
Sbjct: 479 LVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQ 533
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 119/304 (39%), Gaps = 34/304 (11%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ A V K + + Y I L ++K+ A ++ E+M+E PD
Sbjct: 483 GQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVY 542
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQ---EDETVKLALDM 325
+I F + EA ++ +K ++P VV + +I CQ +E V+ M
Sbjct: 543 TTLIDGFIRNESLDEARKIFEFMEQKGIHP--DVVGYNAMIKGYCQFGMMNEAVECMSTM 600
Query: 326 LDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
RK P ++++I + ++ GA +LL M+ P ++S+I+
Sbjct: 601 --------RKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLIN 652
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
Y K GD A + M S+GL P+V TYT L+ ++ A N
Sbjct: 653 GYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSP 712
Query: 442 SPVTYHTLIRGYC---------------KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
+ T H+L+ G C L L + + + P YN +I
Sbjct: 713 NDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAYNAIIF 772
Query: 487 SLCL 490
SLC+
Sbjct: 773 SLCI 776
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 115/252 (45%), Gaps = 15/252 (5%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I + + G A E + G + ++ TY I +++ A S+ M++
Sbjct: 578 NAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMK 637
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
P+ +I+ +CK G A ++ + ++P LI SL ++D+ V+
Sbjct: 638 RRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVR 697
Query: 321 LAL---DML------DDFSGEARKYAI-KPFSSVIRSLCRMK-DVHGAKTLLS---KMIS 366
A+ ML +D++ + + +S+I S C ++HG LL +++
Sbjct: 698 AAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIFRALVN 757
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
+ P N+ +N++I + + A+++ M ++G KPD T+ L+ G+ + G+ E
Sbjct: 758 DRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVGKSRE 817
Query: 427 ACEIL-NEAKKN 437
IL NE +++
Sbjct: 818 WRTILPNEFQRD 829
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 136/285 (47%), Gaps = 10/285 (3%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
T+ I R D A + +KM G D +I FC+ G+ EA ++
Sbjct: 48 TFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEM 107
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
+ P + A L+ LC+ + L ML + + + +++V+ C +
Sbjct: 108 DQ----PDMHMYAALVKGLCKAGRGEE-GLLMLRRMKELGWRPSTRAYAAVVDFRCWERK 162
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
A+ +L +M +G P +VI+AY K G M+ A+ +L+LM+ RG KP+V+TY
Sbjct: 163 AKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNA 222
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
L+ G+ N G++ +A +LN+ + VTY+ LIRG C + A +LL M+ G
Sbjct: 223 LVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDG 282
Query: 474 VQPNVDEYNKLIQSLCLKALDWRT--AEKLLEDMRLKGLHLNGIT 516
+ + YN LI +LC D RT A L + + +G+ N +T
Sbjct: 283 LIADQYTYNALINALC---KDGRTDQACSLFDSLETRGIKPNAVT 324
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 128/287 (44%), Gaps = 5/287 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F + G+ A E+F + + Y ++ L + + + +M E G
Sbjct: 87 LIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRGEEGLLMLRRMKELG 142
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P + ++ + C KAKEA + EK + P +I++ C+E A
Sbjct: 143 WRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSD-A 201
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
L +L+ K + ++++++ C VH A LL+KM G P +N +I
Sbjct: 202 LRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRG 261
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
G + A +L+LM GL D YTY L++ G+ ++AC + + + + +
Sbjct: 262 QCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPN 321
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
VT+++LI G CK + D A K L +M G P+ Y+ I+ LC
Sbjct: 322 AVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLC 368
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 131/326 (40%), Gaps = 5/326 (1%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
A++ A C + + +++K G K V N L+ F GK A + NK
Sbjct: 187 AVINAYCKEGRMSDALRVLELMKLRGCKPN----VWTYNALVQGFCNEGKVHKAMALLNK 242
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + TY I + A+ + M G + D +I+ CK G+
Sbjct: 243 MRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGR 302
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+A ++ + + P LI+ LC+ + V +A L+ +S
Sbjct: 303 TDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGK-VDIAWKFLEKMVSAGCTPDTYTYS 361
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
S I LC+MK + + +M+ + P + VI K + M S
Sbjct: 362 SFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSS 421
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G PDV TYT M Y G++ EA +L E KN + + Y+TL+ G+ + + D A
Sbjct: 422 GCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHA 481
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ +L +M V PN Y L++ L
Sbjct: 482 VSILKQMTSVASVPNQFTYFILLRHL 507
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 5/170 (2%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+++VIRSLCR D+ A LS M+ G P FNS+I Y + + A ++ M
Sbjct: 14 YNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMP 73
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
RG DV +Y L+ G+ G+++EA E+ E + + Y L++G CK +
Sbjct: 74 LRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQPDMHM----YAALVKGLCKAGRGE 129
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
L +L MK++G +P+ Y ++ C + + AE++L++M KGL
Sbjct: 130 EGLLMLRRMKELGWRPSTRAYAAVVDFRCWER-KAKEAEEMLQEMFEKGL 178
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 138/351 (39%), Gaps = 6/351 (1%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+K +C + +E + +KE+G + + ++ K K A E+ +
Sbjct: 117 ALVKGLCKAGRGEEGLLMLRRMKELGWRP----STRAYAAVVDFRCWERKAKEAEEMLQE 172
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ G T I A + A V E M G P+ ++ FC GK
Sbjct: 173 MFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGK 232
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+A + R + P LI C D ++ A +L G+ ++
Sbjct: 233 VHKAMALLNKMRVCGVNPDAVTYNLLIRGQCI-DGHIESAFRLLRLMEGDGLIADQYTYN 291
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
++I +LC+ A +L + + G P FNS+I+ K+G + A + L+ M S
Sbjct: 292 ALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSA 351
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G PD YTY+ + +E + E + + S V Y +I K +
Sbjct: 352 GCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLV 411
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
+ EM G P+V Y +++ C++ AE +L +M G+ ++
Sbjct: 412 ARTWGEMVSSGCNPDVVTYTTSMRAYCIEG-RLNEAENVLMEMSKNGVTVD 461
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 146/375 (38%), Gaps = 35/375 (9%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+AL++ C+ + AL + ++ G V N LI G ++AF +
Sbjct: 221 NALVQGFCNEGKVHKAMALLNKMRVCGVNPDAV----TYNLLIRGQCIDGHIESAFRLLR 276
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G +A+Q TY I AL + D A S+ + + G P++ +I+ CK G
Sbjct: 277 LMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSG 336
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP- 340
K A P + I LC+ +K + + L F GE + +KP
Sbjct: 337 KVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCK----MKGSQEGLS-FIGEMLQKDVKPS 391
Query: 341 ---FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
++ VI L + ++ +M+S G P + + + AY G + A +L
Sbjct: 392 TVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLM 451
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR------ 451
M G+ D Y LM G+A+ GQ + A IL + S + TY L+R
Sbjct: 452 EMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMR 511
Query: 452 -----------GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT--A 498
G K E L + MK PN Y+ +++ + D RT A
Sbjct: 512 LVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGF---SEDGRTEEA 568
Query: 499 EKLLEDMRLKGLHLN 513
L+ M+ + LN
Sbjct: 569 TSLVSLMKEDSISLN 583
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 7/143 (4%)
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N+VI + + D+ A+ L LM G +PD YT+ L+ GY Q++ A ++ ++
Sbjct: 14 YNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMP 73
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
V+Y LI G+C+ D A++L EM QP++ Y L++ LC
Sbjct: 74 LRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAG--- 126
Query: 496 RTAEKLLEDMRLKGLHLNGITRA 518
R E LL R+K L TRA
Sbjct: 127 RGEEGLLMLRRMKELGWRPSTRA 149
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 118/306 (38%), Gaps = 18/306 (5%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI K G+ A +F+ G N T+ I L + D AW EKM+
Sbjct: 291 NALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVS 350
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD+ I CK ++E +K + P +I L +E
Sbjct: 351 AGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKE-RNYG 409
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
L + + +++ +R+ C ++ A+ +L +M G +N+++
Sbjct: 410 LVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLM 469
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM-----------------SGYANGGQ 423
++ G A+ +LK M S P+ +TY L+ +G +
Sbjct: 470 DGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIE 529
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
+ + + + KKN + TY +++ G+ + + A L++ MK+ + N D Y
Sbjct: 530 LTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTA 589
Query: 484 LIQSLC 489
L+ C
Sbjct: 590 LVTCFC 595
Score = 38.5 bits (88), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 44/245 (17%), Positives = 92/245 (37%), Gaps = 20/245 (8%)
Query: 189 EKEKGVLTVEIL--NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRK 246
E K +TV+ + N L+ + +G+ A + + V NQ TY+ + L R +
Sbjct: 452 EMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMR 511
Query: 247 IFD----------W-------AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVV 289
+ + W + + + M + LP+S I+ F + G+ +EA +
Sbjct: 512 LVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSL 571
Query: 290 YTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLC 349
+L +E + + + L++ C+ + A ++ + + ++ L
Sbjct: 572 VSLMKEDSISLNEDIYTALVTCFCKSKRYLD-AWVLVCSMIQHGFIPHLMSYQHLLSGLI 630
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
AK + + P V+ +I K G + EM+ ++ +P
Sbjct: 631 CEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQ 690
Query: 410 TYTGL 414
TY L
Sbjct: 691 TYAML 695
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 155/347 (44%), Gaps = 39/347 (11%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVA-NQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N +IA F G+ +AA EV + + G +A ++ TY I + + A V ++M+
Sbjct: 151 NTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEML 210
Query: 260 ETGSL-PDSEKVGKIISWFCKGGKAKEA-----------------------HVVYTLARE 295
G + P + +I +C GK A H ++ AR
Sbjct: 211 TKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARA 270
Query: 296 KKMY------------PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
Y P LI+ C+E K AL++ ++ S + + ++S
Sbjct: 271 SDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKK-ALEVFEEMSQKGVRATAVTYTS 329
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
+I R V L + + +G P ++N++I+++ GDM A E++ M +
Sbjct: 330 LIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKR 389
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
+ PD TY LM G+ G+++EA +++E K + V+Y+TLI GY + AL
Sbjct: 390 IPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDAL 449
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
++ +EM D G P + YN LIQ LC K AE L+++M KG+
Sbjct: 450 RVRDEMMDKGFNPTLMTYNALIQGLC-KIRQGDDAENLMKEMVAKGI 495
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 135/292 (46%), Gaps = 9/292 (3%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI + +GK A + G TY + AL A++V E+M +
Sbjct: 223 NALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQK 282
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD +I+ +CK G K+A V+ +K + LI ++ + +
Sbjct: 283 NGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQE 342
Query: 321 LALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
D A K I+P ++++I S C D+ A ++++M + PP + +
Sbjct: 343 T-----DRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTY 397
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N+++ + G + A ++ M RG++PD+ +Y L+SGY+ G +++A + +E
Sbjct: 398 NTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMD 457
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ +TY+ LI+G CK+ + D A L+ EM G+ P+ Y LI+ L
Sbjct: 458 KGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGL 509
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 91/172 (52%), Gaps = 7/172 (4%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F+ ++R LC A LL +M P P +N+VI+ + G + A+E+++ MR
Sbjct: 119 FNIMLRHLCATGKPVRALELLRQM----PRPNAVTYNTVIAGFCARGRVQAALEVMREMR 174
Query: 401 SR-GLKPDVYTYTGLMSGYANGGQMEEACEILNEA-KKNHSRLSPVTYHTLIRGYCKLEE 458
R G+ PD YTY L+SG+ G+ME+A ++ +E K S V Y+ LI GYC + +
Sbjct: 175 ERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGK 234
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
D AL+ +M G+ V YN L+ +L + A A +LE+M+ G
Sbjct: 235 LDVALQYREDMVQRGIAMTVATYNLLMHALFMDA-RASDAYAVLEEMQKNGF 285
>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 524
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 160/344 (46%), Gaps = 18/344 (5%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K+G+ +AA +V K N Y I++L + K+ A+ + +MI
Sbjct: 159 LINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKK 218
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK-- 320
PD +I FC G+ KEA ++ + P L+ +LC+E T +
Sbjct: 219 VSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETK 278
Query: 321 --LALDMLD-----------DFSGEARKYA-IKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
LA+ M + + G+ R + ++ +I+ LC++K V A +L ++M
Sbjct: 279 NVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRC 338
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
+G P ++S+I K+ ++ A E+L M +RG DV TYT + Q+++
Sbjct: 339 KGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDK 398
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A ++ + K + + TY+ LI G CK F+ A + ++ G + V YN +I
Sbjct: 399 AVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMIN 458
Query: 487 SLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAVKELEED 529
LCL+ L + A LLE M G + +T +IRA+ + +E+
Sbjct: 459 GLCLEGL-FDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDEN 501
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 128/278 (46%), Gaps = 19/278 (6%)
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
D+A+SV K+++ G PD+ + +I C GK EA + + + L
Sbjct: 100 DFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGIL 159
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
I+ LC+ ET + AL +L G+ + +S++I SLC+ K V A L S+MI +
Sbjct: 160 INGLCKMGET-RAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKK 218
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P F+++I + G A + M + PDV T+ L+ G +E
Sbjct: 219 VSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETK 278
Query: 429 EIL----------NEAKK-----NHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKD 471
+L N+AK R++P +Y +I+ CK++ D AL L NEM+
Sbjct: 279 NVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRC 338
Query: 472 VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
G+ P+ Y+ LI LC K+ A +LL+ M +G
Sbjct: 339 KGITPDKVTYSSLIDGLC-KSERISHAWELLDQMHARG 375
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 141/337 (41%), Gaps = 28/337 (8%)
Query: 154 KWVTSGVV--DALLKAICSSVGKKEVYALWD--IVKEIGEKEKGVLTVEILNELIALFSK 209
K V + VV ++ ++C E Y L+ IVK++ V + LI F
Sbjct: 182 KLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPD------VVTFSALIYGFCM 235
Query: 210 LGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGS------ 263
+G+ K AF +F++ + T+ ++AL + +V M++ +
Sbjct: 236 VGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAK 295
Query: 264 -----------LPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSL 312
PD II CK EA ++ R K + P + + LI L
Sbjct: 296 HVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGL 355
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
C+ E + A ++LD + + ++S + +LC+ V A L+ K+ +G P
Sbjct: 356 CKS-ERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPN 414
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+N +I K G A + + + +G K V+TY +++G G +EA +L
Sbjct: 415 INTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLE 474
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
+ + N VTY T+IR K +E A KLL EM
Sbjct: 475 KMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREM 511
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 8/175 (4%)
Query: 323 LDMLDDFSGEARKYAIKP------FSSVIRSLCRMKDVHG--AKTLLSKMISEGPPPGNA 374
+D+ D S R + P F+ ++ SL + + + A +L ++ P
Sbjct: 25 VDVHDAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIV 84
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
FN+VI+ Y G+M A +L + G PD T T L+ G G++ EA +
Sbjct: 85 TFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHV 144
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
RL+ V+Y LI G CK+ E AL++L ++ V NV Y+ +I SLC
Sbjct: 145 IARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLC 199
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 102/226 (45%), Gaps = 4/226 (1%)
Query: 289 VYTLAREKKMYPPQSVVAF--LISSLCQ-EDETVKLALDMLDDFSGEARKYAIKPFSSVI 345
+ + R +M P S++ F ++ SL + + +A+ + A +I F++VI
Sbjct: 31 ISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTFNTVI 90
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
C + ++ A ++L+K++ G P ++I G + A+ + +RG +
Sbjct: 91 NCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFR 150
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
+ +Y L++G G+ A ++L + + V Y T+I CK + A +L
Sbjct: 151 LNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYEL 210
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH 511
++M V P+V ++ LI C+ ++ A L +M L ++
Sbjct: 211 YSQMIVKKVSPDVVTFSALIYGFCMVG-QFKEAFGLFHEMVLTNIN 255
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 103/256 (40%), Gaps = 14/256 (5%)
Query: 162 DALLKAICSSVGKKEV-YALWDIVKEIGEKEKGVLTVEILNE------------LIALFS 208
+ L+ A+C KE L ++KE+ + K I+ + +I
Sbjct: 262 NILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLC 321
Query: 209 KLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSE 268
K+ A +FN+ G ++ TY I+ L + + AW + ++M G D
Sbjct: 322 KIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVI 381
Query: 269 KVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDD 328
+ CK + +A + +++ + P + LI LC+E + A + D
Sbjct: 382 TYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGR-FENAQVIFQD 440
Query: 329 FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD 388
+ K + ++ +I LC A TLL KM G P + ++I A K +
Sbjct: 441 LLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDE 500
Query: 389 MTPAMEMLKLMRSRGL 404
A ++L+ M +RGL
Sbjct: 501 NHKAEKLLREMIARGL 516
>gi|297807861|ref|XP_002871814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317651|gb|EFH48073.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 459
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 185/444 (41%), Gaps = 59/444 (13%)
Query: 78 EYAQMDP--SADAVESKEEEAYEIDGDKLENVLSLLQSSVDGYLESSLDSFELDLHEDFV 135
+ ++P S+D+ +K + I+ +V+++++ + + E SL+S L + +FV
Sbjct: 28 HFTSLEPLQSSDSTPTKGDYFAAIN-----HVVNIVRREI--HPERSLNSLRLPVTSEFV 80
Query: 136 LKVLETPLVLGENLVCFFKWV--------TSGVVDALLKAICSSVGKKEVYALWDIVKEI 187
+VL + + FF W TS + L K++ S K+ ++W I+K++
Sbjct: 81 FRVLRATSRSANDSLRFFNWARSNPSYTPTSMEYEELAKSLAS---HKKYESMWKILKQM 137
Query: 188 GEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF-GDYGCVANQETYYFTIEALSRRK 246
+ + + E L +I + K G A E+FN GC + Y + AL K
Sbjct: 138 KDLSLDI-SGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNALLHALCDVK 196
Query: 247 IFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVA 306
+F A+++ +MI G PD +++ +C GK KEA K PP
Sbjct: 197 MFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRKGFNPPARGRD 256
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
LI L + AK ++ KM
Sbjct: 257 LLIEGLLNAGY------------------------------------LESAKEIVDKMTK 280
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
G P FN++I A SK+G++ +EM GL D+ TY L+ + G+++E
Sbjct: 281 GGFVPDILTFNTLIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDE 340
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A +LN ++ + P Y +I+G C+ FD A ++MK PN Y LI
Sbjct: 341 AFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLI- 399
Query: 487 SLCLKALDWRTAEKLLEDMRLKGL 510
++C + + A L +M GL
Sbjct: 400 TMCGRGGKFVDAANYLVEMTEMGL 423
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 104/281 (37%), Gaps = 19/281 (6%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA 216
T V +ALL A+C YAL + G K ++N + GK K A
Sbjct: 181 TVDVYNALLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNG----WCSAGKMKEA 236
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
E ++ G IE L + A + +KM + G +PD +I
Sbjct: 237 QEFLDEMSRKGFNPPARGRDLLIEGLLNAGYLESAKEIVDKMTKGGFVPDILTFNTLIEA 296
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI---SSLCQEDETVKLALDMLDDFSGEA 333
K G+ + +Y A + + LI S + + DE +L + ++D
Sbjct: 297 ISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVED----- 351
Query: 334 RKYAIKPFSS----VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
KPF S +I+ +CR A + S M + PP V+ +I+ + G
Sbjct: 352 ---GHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKF 408
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
A L M GL P + + G N G+ + A I
Sbjct: 409 VDAANYLVEMTEMGLVPISRCFDMVTDGLKNSGKHDLAMRI 449
>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 148/335 (44%), Gaps = 23/335 (6%)
Query: 189 EKEKGVLTVEILNELIAL--FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRK 246
E ++G L ++ I + F K G + A + FN+ + GC N TY I A + K
Sbjct: 508 EMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK 567
Query: 247 IFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVA 306
+A + E M+ G LP+ +I CK G+ ++A ++ K P
Sbjct: 568 KVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVP------ 621
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
V + DD + E I + +++ C++ V A+ LL M
Sbjct: 622 -----------DVDMYFKQYDDDNSERPNVVI--YGALLDGFCKLHRVEEARKLLDAMSM 668
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
EG P V++++I K G + A E+ M G +YTY+ L+ Y + +
Sbjct: 669 EGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDL 728
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A ++L++ +N + V Y +I G CK+ + D A KL+ M++ G QPNV Y +I
Sbjct: 729 ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 788
Query: 487 SLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALI 520
+ T +LLE M KG+ N +T R LI
Sbjct: 789 GFG-RIGKIETCLELLERMGSKGVAPNYVTYRVLI 822
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 129/306 (42%), Gaps = 24/306 (7%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + K K A E+F GC+ N TY I+ + + A + E+M +
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSK 618
Query: 263 SLPD------------SEK-----VGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVV 305
+PD SE+ G ++ FCK + +EA + + P Q V
Sbjct: 619 DVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVY 678
Query: 306 AFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLS 362
LI LC+ DE ++ +M S + +SS+I ++K A +LS
Sbjct: 679 DALIDGLCKVGKLDEAQEVKAEM----SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLS 734
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG 422
KM+ P ++ +I K G A +++++M +G +P+V TYT ++ G+ G
Sbjct: 735 KMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIG 794
Query: 423 QMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
++E E+L + VTY LI CK D A LL EMK + Y
Sbjct: 795 KIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYR 854
Query: 483 KLIQSL 488
K+I+
Sbjct: 855 KVIEGF 860
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 133/339 (39%), Gaps = 62/339 (18%)
Query: 209 KLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD-- 266
+LG+ K V N GC + + + + A +A+ + +KM++ G P
Sbjct: 352 QLGRCK---RVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYV 408
Query: 267 -----------------------SEK----------------VGKIISWFCKGGKAKEAH 287
+EK V C GK ++A
Sbjct: 409 VYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAF 468
Query: 288 VVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRS 347
V + P S + ++ LC + ++LA + ++ + ++ ++ S
Sbjct: 469 SVIREMIGQGFIPDTSTYSKVLGYLCNASK-MELAFLLFEEMKRGGLVADVYTYTIMVDS 527
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
C+ + A+ ++M G P + ++I AY KA ++ A E+ + M S G P+
Sbjct: 528 FCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPN 587
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEA-----------------KKNHSRLSPVTYHTLI 450
+ TY+ L+ G+ GQME+AC+I N R + V Y L+
Sbjct: 588 IVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALL 647
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
G+CKL + A KLL+ M G +PN Y+ LI LC
Sbjct: 648 DGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC 686
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 109/276 (39%), Gaps = 32/276 (11%)
Query: 268 EKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED---------ET 318
E + ++ +C+ G A ++ + P +S LI + + D
Sbjct: 201 EFLNVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHRE 260
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+ LA +D F+ Y SLC++ A TL M +E P +
Sbjct: 261 MSLANLRMDGFTLRCYAY----------SLCKVGKWREALTL---METENFVPDTVFYTK 307
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+IS +A AM+ L MR+ P+V TY+ L+ G N Q+ +LN
Sbjct: 308 LISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEG 367
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC-----LKAL 493
SP +++L+ YC + A KLL +M G P YN LI S+C L
Sbjct: 368 CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCH 427
Query: 494 DWRTAEKLLEDMRLKGLHLNGI-----TRALIRAVK 524
AEK +M G+ LN I TR L A K
Sbjct: 428 LLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGK 463
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 134/331 (40%), Gaps = 9/331 (2%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
+ ALL C +E L D + G + + + + LI K+GK A EV
Sbjct: 642 IYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQI----VYDALIDGLCKVGKLDEAQEV 697
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
+ ++G A TY I+ + K D A V KM+E P+ ++I CK
Sbjct: 698 KAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 757
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
GK EA+ + + EK P +I + + ++ L++L+ +
Sbjct: 758 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGK-IETCLELLERMGSKGVAPNYV 816
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
+ +I C+ + A LL +M P A + VI ++K + ++ +L +
Sbjct: 817 TYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNK--EFIESLGLLDEI 874
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV--TYHTLIRGYCKLE 457
P + Y L+ ++E A +L E + L TY++LI C
Sbjct: 875 GQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLAN 934
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ D A +L +EM GV P + + LI+ L
Sbjct: 935 KVDKAFRLFSEMSKKGVIPEMQTFCSLIKGL 965
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 74/173 (42%), Gaps = 19/173 (10%)
Query: 362 SKMISEGPPPGNAVFNS----VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
++ I++ G+ VF S + + + + +E+L+L+ + + G G
Sbjct: 101 ARAIADAVSGGDDVFGSKSQKFLRQFREKLSESLVIEVLRLIERPSAVISFFVWAGRQIG 160
Query: 418 YANGGQMEEAC--------------EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
Y + + A E+L + + + + + L+R YC+ F AL
Sbjct: 161 YKHTSPVYNALVDLIVRDDDEKVPEELLQQIRDDDKEVFGEFLNVLVRKYCRSGSFSIAL 220
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ L +KD +P+ YN LIQ+ LKA +A + +M L L ++G T
Sbjct: 221 EELGRLKDFRFRPSRSTYNCLIQAF-LKADCLDSASLVHREMSLANLRMDGFT 272
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 74/182 (40%), Gaps = 4/182 (2%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
K+ +++++ + R D + LL ++ + N ++ Y ++G + A+E
Sbjct: 162 KHTSPVYNALVDLIVRDDDEKVPEELLQQIRDDDKEVFGEFLNVLVRKYCRSGSFSIALE 221
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
L ++ +P TY L+ + ++ A + E + R+ T C
Sbjct: 222 ELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAYSLC 281
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG 514
K+ ++ AL L M+ P+ Y KLI LC +L + A L MR N
Sbjct: 282 KVGKWREALTL---METENFVPDTVFYTKLISGLCEASL-FEEAMDFLNRMRATSCLPNV 337
Query: 515 IT 516
+T
Sbjct: 338 VT 339
>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
Length = 814
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 152/322 (47%), Gaps = 8/322 (2%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
I N I +F + + + A + G V N TY I + A + + M
Sbjct: 282 ICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDM 341
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAH-VVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
G LPD I+ + CK + E ++ +A+E + Q LI L + D
Sbjct: 342 PSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDH 401
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP-PPGNAVF 376
+ AL L D + + +S+++ +LC+ + AK L+++M+S+G PP +
Sbjct: 402 ADE-ALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTY 460
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
+V++ + + G++ A ++L++M + G KP+ +YT L++G G+ EA E++N +++
Sbjct: 461 TAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEE 520
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ +TY L+ G K + A ++ EM G P E N L+QSLC D R
Sbjct: 521 QWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLC---RDGR 577
Query: 497 T--AEKLLEDMRLKGLHLNGIT 516
T A K +E+ KG +N +
Sbjct: 578 THEARKFMEECLNKGCAINVVN 599
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 133/295 (45%), Gaps = 18/295 (6%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYG-CVANQETYYFTIEALSRRKIFDWAWSVCEKMIET 261
++ K G+ A ++ N+ G C + TY + R D A + + M
Sbjct: 427 IVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTH 486
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
G P++ +++ C+ GK+ EA + ++ E+ P + L+ L +E +
Sbjct: 487 GYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGK---- 542
Query: 322 ALDMLDDFSGEARKYAIKPF-------SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
L + R+ +K F + +++SLCR H A+ + + +++G
Sbjct: 543 ----LSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVV 598
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
F +VI + + ++ A+ +L M DV+TYT L+ G++ EA E++ +
Sbjct: 599 NFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKM 658
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+PVTY T+I YC++E+ D + +L +M + Q YN++I+ LC
Sbjct: 659 LHKGIDPTPVTYRTVIHRYCQMEKVDDLVAILEKM--ILRQKCKTIYNQVIEKLC 711
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 90/189 (47%), Gaps = 4/189 (2%)
Query: 301 PQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTL 360
P V A L S Q+DE V L D R + + S++ L + K GA+ +
Sbjct: 177 PSQVCAVLRS---QDDERVALKFFYWADRQWRYRHDPM-VYYSMLEVLSKTKMCQGARRV 232
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
L M G F V+ +YS+AG + A+++L LM+ G++P++ + +
Sbjct: 233 LVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVR 292
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
++E+A L + + VTY+ +IRGYC L + A++LL++M G P+
Sbjct: 293 ANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVS 352
Query: 481 YNKLIQSLC 489
Y ++ LC
Sbjct: 353 YYTIMGYLC 361
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 138/333 (41%), Gaps = 13/333 (3%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
A++ C + L I+ G K V +LN L + GK A E+ N
Sbjct: 462 AVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGL----CRTGKSLEAREMMNM 517
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ N TY + L + A V +M+ G P ++ ++ C+ G+
Sbjct: 518 SEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGR 577
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
EA K +VV F +I CQ DE + AL +LDD + +
Sbjct: 578 THEARKFMEECLNKGC--AINVVNFTTVIHGFCQNDE-LDAALSVLDDMYLINKHADVFT 634
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+++++ +L + + A L+ KM+ +G P + +VI Y + M +++ ++
Sbjct: 635 YTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQ---MEKVDDLVAILE 691
Query: 401 SRGLKPDVYT-YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
L+ T Y ++ G++EEA ++L + + SR T + L+ GY K+
Sbjct: 692 KMILRQKCKTIYNQVIEKLCGLGKLEEADKLLGKVLRTASRSDAKTCYALMEGYLKIGVP 751
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
A K+ M + + P+V KL + L ++
Sbjct: 752 LLAYKVACRMFNRNLIPDVKMCEKLSKRLVVEG 784
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 1/149 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F V+ S R + A +L+ M G P + N+ I + +A + A+ L+ M+
Sbjct: 248 FLRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQ 307
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G+ P+V TY ++ GY + ++EEA E+L++ V+Y+T++ CK +
Sbjct: 308 VVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIV 367
Query: 461 CALKLLNEM-KDVGVQPNVDEYNKLIQSL 488
L+ +M K+ G+ + YN LI L
Sbjct: 368 EVRDLMKKMAKEHGLVRDQVTYNTLIHML 396
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 7/138 (5%)
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
V+ S++ SK A +L LM+ RG+ + +M Y+ GQ+ +A ++L
Sbjct: 212 VYYSMLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDALKVLTLM 271
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
++ + + +T I + + + AL+ L M+ VG+ PNV YN +I+ C D
Sbjct: 272 QRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYC----D 327
Query: 495 WRTAE---KLLEDMRLKG 509
E +LL+DM KG
Sbjct: 328 LHRVEEAIELLDDMPSKG 345
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 146/322 (45%), Gaps = 3/322 (0%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNK-FGDYGCVANQETYYFTIEALSRRKIFDWAWSV 254
V + N LI + G+ A V ++ GC + TY I L ++ A +
Sbjct: 370 NVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAREL 429
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
+M G P+ +I FCK G+ +EA V K + LIS+LC+
Sbjct: 430 MNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCK 489
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
DE V+ AL+M D S + K I F+S+I LC++ A L M+ EG
Sbjct: 490 -DEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTI 548
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
+N++I A+ + G M A++++ M RG D TY GL+ G +E+ + +
Sbjct: 549 TYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDM 608
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
+ ++ + LI G C+ AL+ L +M G+ P++ YN LI LC K
Sbjct: 609 MSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLC-KTGR 667
Query: 495 WRTAEKLLEDMRLKGLHLNGIT 516
+ A L + ++++G+ + IT
Sbjct: 668 AQEALNLFDKLQVEGICPDAIT 689
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 133/301 (44%), Gaps = 22/301 (7%)
Query: 186 EIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRR 245
+I E V+T IL I F K G+ + A V ++ G N Y I AL +
Sbjct: 434 QIKGCEPNVITYTIL---IDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKD 490
Query: 246 KIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVV 305
+ A ++ M G PD +I CK K +EA +Y + +
Sbjct: 491 EKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITY 550
Query: 306 AFLISSLCQE---DETVKLALDML------DDFSGEARKYAIKPFSSVIRSLCRMKDVHG 356
LI + + E +KL DML DD + ++ +I++LCR ++
Sbjct: 551 NTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDIT----------YNGLIKALCRAGNIEK 600
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
L M+S+G P N N +I+ + G++ A+E L+ M RGL PD+ TY L++
Sbjct: 601 GLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLIN 660
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
G G+ +EA + ++ + +TY+TLI +CK FD A LL+ D G P
Sbjct: 661 GLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIP 720
Query: 477 N 477
N
Sbjct: 721 N 721
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 139/309 (44%), Gaps = 13/309 (4%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI K G +A E+ N+ GC N TY I+ + + A +V ++M
Sbjct: 411 NTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSG 470
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G ++ +IS CK K ++A ++ K P LI LC+ ++ +
Sbjct: 471 KGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNK-FE 529
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
AL + D E ++++I + R + A L++ M+ G P + +N +I
Sbjct: 530 EALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLI 589
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
A +AG++ + + + M S+GL P+ + L++G G ++ A E L + H
Sbjct: 590 KALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMI--HRG 647
Query: 441 LSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
L+P VTY++LI G CK AL L ++++ G+ P+ YN LI W
Sbjct: 648 LTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLIS--------WHCK 699
Query: 499 EKLLEDMRL 507
E + +D L
Sbjct: 700 EGMFDDAHL 708
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 167/385 (43%), Gaps = 52/385 (13%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA 216
T GVV +KA+C EV + ++K++ + V + LI SK+G+
Sbjct: 237 TFGVV---MKALCLV---NEVDSACALLKDM-TRHGCVPNAIVYQTLIHALSKVGRVNEV 289
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
++ + GC+ + T+ I L + A + ++M+ G P+S G ++
Sbjct: 290 LKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHG 349
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
C+ GK EA ++ K+ P V+
Sbjct: 350 LCRMGKVDEARMLL-----NKVPNPNVVL------------------------------- 373
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSK-MISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
F+++I + AK ++ + M+S G P +N++I K G + A E+
Sbjct: 374 ----FNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAREL 429
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
+ M+ +G +P+V TYT L+ + G++EEA +L+E L+ V Y+ LI CK
Sbjct: 430 MNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCK 489
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
E+ AL + +M G +P++ +N LI LC K + A L +DM L+G+ N I
Sbjct: 490 DEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLC-KVNKFEEALGLYQDMLLEGVIANTI 548
Query: 516 T-RALIRAVKELEEDAIENGEALVE 539
T LI A L A++ LV
Sbjct: 549 TYNTLIHAF--LRRGAMQEALKLVN 571
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 105/254 (41%), Gaps = 4/254 (1%)
Query: 205 ALFSKLGKGKAAFEVFNKFGDY---GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET 261
L S L K + + N FGD GC + T+ I L + F+ A + + M+
Sbjct: 482 CLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLE 541
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
G + ++ +I F + G +EA + + LI +LC+ K
Sbjct: 542 GVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEK- 600
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
L + +D + + +I LCR ++ A L MI G P +NS+I+
Sbjct: 601 GLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLIN 660
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
K G A+ + ++ G+ PD TY L+S + G ++A +L+ +
Sbjct: 661 GLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIP 720
Query: 442 SPVTYHTLIRGYCK 455
+ VT++ L+ + K
Sbjct: 721 NEVTWYILVSNFIK 734
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M S+G+ P VYT+ +M +++ AC +L + ++ + + Y TLI K+
Sbjct: 226 MLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGR 285
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRA 518
+ LKLL EM +G P+V+ +N I LC K L A KL++ M L+G N T
Sbjct: 286 VNEVLKLLEEMLLMGCIPDVNTFNDAIHGLC-KMLRIHEAAKLVDRMLLRGFTPNSFTYG 344
Query: 519 LI 520
++
Sbjct: 345 VL 346
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 78/188 (41%), Gaps = 1/188 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI F + G + A ++ N GC + TY I+AL R + ++ E M+
Sbjct: 551 NTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMS 610
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P++ +I+ C+ G + A + + P LI+ LC+ +
Sbjct: 611 KGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQE 670
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
AL++ D E ++++I C+ A LLS+ + G P + ++
Sbjct: 671 -ALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILV 729
Query: 381 SAYSKAGD 388
S + K GD
Sbjct: 730 SNFIKEGD 737
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 71/173 (41%), Gaps = 3/173 (1%)
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ +L LDM +S E + ++ V+ L + +M+S+G P F
Sbjct: 182 QATRLLLDMRGVYSCEP---TFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTF 238
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
V+ A ++ A +LK M G P+ Y L+ + G++ E ++L E
Sbjct: 239 GVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLL 298
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
T++ I G CK+ A KL++ M G PN Y L+ LC
Sbjct: 299 MGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLC 351
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 65/156 (41%), Gaps = 4/156 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+KA+C + ++ AL++ + G + N LI + G + A E
Sbjct: 586 NGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISC----NILINGLCRTGNIQHALEFLR 641
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G + TY I L + A ++ +K+ G PD+ +ISW CK G
Sbjct: 642 DMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEG 701
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
+AH++ + + P + L+S+ +E +
Sbjct: 702 MFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 737
>gi|15238810|ref|NP_197340.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635760|sp|Q94JX6.2|PP391_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g18390, mitochondrial; Flags: Precursor
gi|332005166|gb|AED92549.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 459
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 186/440 (42%), Gaps = 59/440 (13%)
Query: 104 LENVLSLLQSSVDGYLESSLDSFELDLHEDFVLKVLETPLVLGENLVCFFKWV------- 156
+ +V+++++ + + E SL+S L + +FV +VL + + FF W
Sbjct: 51 INHVVNIVRREI--HPERSLNSLRLPVTSEFVFRVLRATSRSSNDSLRFFNWARSNPSYT 108
Query: 157 -TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKA 215
TS + L K++ S K+ ++W I+K++ + + + E L +I + K G
Sbjct: 109 PTSMEYEELAKSLAS---HKKYESMWKILKQMKDLSLDI-SGETLCFIIEQYGKNGHVDQ 164
Query: 216 AFEVFNKFGD-YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
A E+FN GC + Y + AL K+F A+++ +MI G PD ++
Sbjct: 165 AVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILV 224
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR 334
+ +C GK KEA + LD+ S
Sbjct: 225 NGWCSAGKMKEAQ------------------------------------EFLDEMSRRGF 248
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
+ +I L + AK ++SKM G P FN +I A SK+G++ +E
Sbjct: 249 NPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIE 308
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
M GL D+ TY L+ + G+++EA +LN ++ + P Y +I+G C
Sbjct: 309 MYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMC 368
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG 514
+ FD A ++MK PN Y LI ++C + + A L +M G L
Sbjct: 369 RNGMFDDAFSFFSDMKVKAHPPNRPVYTMLI-TMCGRGGKFVDAANYLVEMTEMG--LVP 425
Query: 515 ITRALIRAVKELEEDAIENG 534
I+R ++ D ++NG
Sbjct: 426 ISRCF-----DMVTDGLKNG 440
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 105/281 (37%), Gaps = 19/281 (6%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA 216
T V ++LL A+C YAL + G K ++N + GK K A
Sbjct: 181 TVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNG----WCSAGKMKEA 236
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
E ++ G IE L + A + KM + G +PD + +I
Sbjct: 237 QEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEA 296
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI---SSLCQEDETVKLALDMLDDFSGEA 333
K G+ + +Y A + + LI S + + DE +L + ++D
Sbjct: 297 ISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVED----- 351
Query: 334 RKYAIKPFSS----VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
KPF S +I+ +CR A + S M + PP V+ +I+ + G
Sbjct: 352 ---GHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKF 408
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
A L M GL P + + G NGG+ + A I
Sbjct: 409 VDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRI 449
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 119/246 (48%), Gaps = 9/246 (3%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFS 330
++ C G+ K+AH ++ +M P VV + ++ C E ++ A+ +L + +
Sbjct: 259 LLKALCTAGRIKDAHQLF-----DEMASPPDVVTYGIMVHGYCTLSE-LETAIKLLSEMA 312
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
+ ++SVI LC V A ++ M+ G AVF +V+S + + GD+
Sbjct: 313 ARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLA 372
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A M+ RGL D TYT L++G G+++EA +L E + + VTY LI
Sbjct: 373 AARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLI 432
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
GYCK+ + A + N+M V PNV Y L LC K D A +LL +M KGL
Sbjct: 433 DGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLC-KQGDVCAANELLHEMCSKGL 491
Query: 511 HLNGIT 516
LN T
Sbjct: 492 ELNIFT 497
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 162/355 (45%), Gaps = 9/355 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ LLKA+C++ K+ + L+D + + V+T I+ + + L + + A ++ +
Sbjct: 257 NILLKALCTAGRIKDAHQLFDEMASPPD----VVTYGIM---VHGYCTLSELETAIKLLS 309
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ G N Y I L A V E M+ G + D+ ++S FC+ G
Sbjct: 310 EMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKG 369
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
A + +++ + LI+ LC+ E +K A +L + + +
Sbjct: 370 DLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGE-LKEAERVLQEMEDKGLDVDAVTY 428
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+ +I C++ + A + +KM+ + P + ++ K GD+ A E+L M S
Sbjct: 429 TVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
+GL+ +++TY L++G G +E+A + + + + TY T+I C+ +E D
Sbjct: 489 KGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A LL EM D G++P + YN L+ C+ ++LLE M K +H N T
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSG-RVEGGKRLLEWMLEKNIHPNTTT 602
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 152/329 (46%), Gaps = 3/329 (0%)
Query: 194 VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWS 253
VL + +++ F + G AA F++ G A+ TY I L R A
Sbjct: 352 VLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAER 411
Query: 254 VCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC 313
V ++M + G D+ +I +CK GK EA +V+ +K++ P L LC
Sbjct: 412 VLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLC 471
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
++ + V A ++L + + + I ++S+I LC+ ++ A + M G P
Sbjct: 472 KQGD-VCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDV 530
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+ ++I A ++ ++ A +L+ M +G+KP + TY LM+G+ G++E +L
Sbjct: 531 YTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEW 590
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
+ + + TY++L++ YC + ++ M V PN + YN LI+ C KA
Sbjct: 591 MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHC-KAR 649
Query: 494 DWRTAEKLLEDMRLKGLHLNGIT-RALIR 521
+ + A +M KG L + ALIR
Sbjct: 650 NMKEALYFHSEMIEKGFRLTASSYNALIR 678
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 137/323 (42%), Gaps = 5/323 (1%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+ +C + KE +++E+ +K V V LI + K+GK AF V NK
Sbjct: 395 ALINGLCRAGELKEA---ERVLQEMEDKGLDVDAV-TYTVLIDGYCKVGKMTEAFLVHNK 450
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
N TY + L ++ A + +M G + +I+ CK G
Sbjct: 451 MVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGN 510
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
++A E + P +I +LCQ E + A +L + + K I ++
Sbjct: 511 LEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE-LDRAHSLLQEMLDKGIKPTIVTYN 569
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
++ C V G K LL M+ + P +NS++ Y +M E+ K M S+
Sbjct: 570 VLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQ 629
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
+ P+ TY L+ G+ M+EA +E + RL+ +Y+ LIR K ++F A
Sbjct: 630 EVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEA 689
Query: 463 LKLLNEMKDVGVQPNVDEYNKLI 485
+L +M+ + D YN I
Sbjct: 690 RRLFEKMRKERLTAEPDVYNFYI 712
Score = 38.9 bits (89), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 74/183 (40%), Gaps = 23/183 (12%)
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD----------MTPA 392
+V L ++D A+ +L + + P P IS Y P+
Sbjct: 152 AVAAHLAAVRDPGAARAILVRAL-RFPSPHRHFVEQFISTYKAFSSDPVSFDLLLLCLPS 210
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
+L +R G+ P + ++ ++EA ++ E + ++ +Y+ L++
Sbjct: 211 APLLLRLRQYGISPSPESCNAVLCRLP----LDEAVQLFQELPEKNT----CSYNILLKA 262
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
C A +L +EM P+V Y ++ C + + TA KLL +M +GL L
Sbjct: 263 LCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTLS-ELETAIKLLSEMAARGLEL 318
Query: 513 NGI 515
N +
Sbjct: 319 NPV 321
>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 500
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 144/318 (45%), Gaps = 14/318 (4%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFT--IEALSRRKIFDWAWSVCEK 257
+ L+ +KL K +A +F G + + Y FT I+ R A S K
Sbjct: 82 FSRLLIAIAKLNKYEAVISLFRHLEMLG--ISHDLYSFTTLIDCFCRCARLSLALSCLGK 139
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M++ G P G +++ FC + EA + P + +I SLC++ +
Sbjct: 140 MMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQ 199
Query: 318 TVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
V ALD+L +K I+P ++S+I L + +LS M+ G P
Sbjct: 200 -VNTALDVLK----HMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDV 254
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
F+++I Y K G + A + M R + P++ TY L++G G ++EA ++LN
Sbjct: 255 ITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNV 314
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
+ VTY+TLI GYCK + D +K+L M GV + YN L Q C +A
Sbjct: 315 LVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYC-QAG 373
Query: 494 DWRTAEKLLEDMRLKGLH 511
+ AEK+L M G+H
Sbjct: 374 KFSAAEKVLGRMVSCGVH 391
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 152/349 (43%), Gaps = 16/349 (4%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L+ C E +L D + +G + V I N +I + G+ A +V
Sbjct: 154 SLVNGFCHVNRFYEAMSLVDQIVGLGYEP----NVVIYNTIIDSLCEKGQVNTALDVLKH 209
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + TY I L + + + M+ G PD +I + K G+
Sbjct: 210 MKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQ 269
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDML--DDFSGEARKYA 337
EA Y ++ + P LI+ LC DE K+ L++L F A Y
Sbjct: 270 LLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKV-LNVLVSKGFFPNAVTY- 327
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+++I C+ K V +L M +G +N++ Y +AG + A ++L
Sbjct: 328 ----NTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLG 383
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M S G+ PD+YT+ L+ G + G++ +A L + +K+ + + +TY+ +I+G CK +
Sbjct: 384 RMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKAD 443
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
+ + A L + GV P+V Y ++ L K L WR A +L M+
Sbjct: 444 KVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRL-WREAHELYRKMQ 491
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 1/160 (0%)
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A TL M P P F+ ++ A +K + + + + G+ D+Y++T L+
Sbjct: 63 ALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLID 122
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
+ ++ A L + K S VT+ +L+ G+C + F A+ L++++ +G +P
Sbjct: 123 CFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEP 182
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
NV YN +I SLC K TA +L+ M+ G+ + +T
Sbjct: 183 NVVIYNTIIDSLCEKG-QVNTALDVLKHMKKMGIRPDVVT 221
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 87/244 (35%), Gaps = 9/244 (3%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V + LI ++ K G+ A + +N+ N TY I L + D A V
Sbjct: 254 VITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLN 313
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
++ G P++ +I+ +CK + + + + + L CQ
Sbjct: 314 VLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAG 373
Query: 317 ETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
+ + G + P F+ ++ LC + A L + G
Sbjct: 374 K-----FSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVG 428
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+N +I KA + A + + +G+ PDV TY +M G EA E+
Sbjct: 429 IITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYR 488
Query: 433 EAKK 436
+ +K
Sbjct: 489 KMQK 492
>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Brachypodium distachyon]
Length = 814
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 150/352 (42%), Gaps = 43/352 (12%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGV-LTVEILNELIALFSKLGKGKAAFE 218
++ A K +C +E +W + EKG+ + + N LI + K A E
Sbjct: 444 LMTACTKQLCQGRRHQEAVGIW-----LKMLEKGLCINIATSNALIHGLCEGKNMKGATE 498
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
V + G + TY I+ + + A + + MI G PD+ II +C
Sbjct: 499 VLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYC 558
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
GK +EA L +L E + +
Sbjct: 559 DLGKMEEA------------------------------------LHLLGQMKIEGVQPDV 582
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
+ ++I C+ KD+ A L+++++ G P ++N++I Y + G+++ A+ +L
Sbjct: 583 VSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDT 642
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M S G++P TY LM + G ++EA + +++KN + V Y +I+G CK+ +
Sbjct: 643 MESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGK 702
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
D A+ EM+ + PN Y L+ + C K+ + A KL ++M G+
Sbjct: 703 MDEAMNYFEEMRSRSIPPNKITYTTLMYAYC-KSGNNEEASKLFDEMVSSGI 753
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 165/391 (42%), Gaps = 44/391 (11%)
Query: 163 ALLKAICSSVGKKE--VYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVF 220
+++KA+C VGK + L D++ ++ G + N L+ K G+ A +
Sbjct: 234 SMIKALCK-VGKVDDGFKILSDLIHAGLQQSAGAVPY---NLLMDALCKSGRVDEAIRLK 289
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ + + T+ I L R F ++ +M G P+ ++I W C+
Sbjct: 290 GRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRK 349
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
G EA ++ K+M + +LC+E E ++ A +L++
Sbjct: 350 GHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGE-MERAERILEEMLSTGMTIHSGL 408
Query: 341 FSSVIRSLC-RMKDVHGAKTLLSKMISEGPPPGNAVF----------------------- 376
F+SV+ L R + L+S+M+ G P +A+
Sbjct: 409 FNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKM 468
Query: 377 ------------NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
N++I + +M A E+L+ M ++G++ D TY ++ G ++
Sbjct: 469 LEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKI 528
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
EEA ++ ++ + + ++++I YC L + + AL LL +MK GVQP+V Y +
Sbjct: 529 EEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTI 588
Query: 485 IQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
I C KA D + A + L ++ GL N +
Sbjct: 589 IDGYC-KAKDIQKANEYLNELMACGLKPNAV 618
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 80/173 (46%), Gaps = 12/173 (6%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
S R + R+ +H +T + + P + + + S G + A++ ++
Sbjct: 126 LPSARRLIKRLLHLHPVQTAAAAVADASSTPSSDLLINTCVTSSARGSLRLAVDAFHVLS 185
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEE 458
SR P V T L+ A G + C++ +E + + ++P +Y ++I+ CK+ +
Sbjct: 186 SRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKT-VTPNGYSYTSMIKALCKVGK 244
Query: 459 FDCALKLLNEMKDVGVQPNVDE--YNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
D K+L+++ G+Q + YN L+ +LC + ++ E +RLKG
Sbjct: 245 VDDGFKILSDLIHAGLQQSAGAVPYNLLMDALC-------KSGRVDEAIRLKG 290
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 129/259 (49%), Gaps = 7/259 (2%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
TY I D A + ++M G P++ +I C G+ + A +V
Sbjct: 163 TYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEM 222
Query: 294 REKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDD--FSGEARKYAIKPFSSVIRSLC 349
+ + +VV + LI LCQ+ ++ ++ LD+ SG A ++++I LC
Sbjct: 223 KLRGNECCPNVVTYTQLIHGLCQKG-LFEMGMEFLDEMIISGCFPNNAT--YTALIHGLC 279
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
+ A LL++M++ G ++NS+I K G++ A EM LM +G+ PDV+
Sbjct: 280 QKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVF 339
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
TYT L+ G + G ++EA ++ E + + VTY TLI G+ + + D AL+L+NEM
Sbjct: 340 TYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEM 399
Query: 470 KDVGVQPNVDEYNKLIQSL 488
K G+ P D Y L +SL
Sbjct: 400 KSNGLMPAGDIYKILFKSL 418
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 123/285 (43%), Gaps = 4/285 (1%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
+Y I L ++ A + +M E GS PDS +I+ CK + + +
Sbjct: 93 SYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEM 152
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
+ + P LI C V A+D+LD+ ++++I+ LC +
Sbjct: 153 QARGFSPTVVTYTTLIHGFCTAGR-VDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGE 211
Query: 354 VHGAKTLLSKMISEGPP--PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTY 411
V A +L +M G P + +I + G ME L M G P+ TY
Sbjct: 212 VERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATY 271
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
T L+ G G EA +LNE L V Y++LI G CK+ E D A ++ M +
Sbjct: 272 TALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVE 331
Query: 472 VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
GV P+V Y LIQ LC L A L+++MR KG+ N +T
Sbjct: 332 KGVAPDVFTYTSLIQGLCDAGL-LDEALGLMQEMRAKGIVPNSVT 375
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 68/133 (51%), Gaps = 4/133 (3%)
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
KL+ S+ DV +Y+ ++G GQ+ EA EI E ++ S TY+ LI G CK
Sbjct: 82 KLLNSQ--DTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKD 139
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ + + L++EM+ G P V Y LI C A A +L++M +G+ N +T
Sbjct: 140 AQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFC-TAGRVDAAMDILDEMEHRGITPNTVT 198
Query: 517 -RALIRAVKELEE 528
ALI+ + + E
Sbjct: 199 YTALIQGLCDCGE 211
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 122/248 (49%), Gaps = 13/248 (5%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFS 330
++ C G+ K+AH ++ +M P VV + ++ C E ++ A+ +L + +
Sbjct: 259 LLKALCTAGRIKDAHQLF-----DEMASPPDVVTYGIMVHGYCTLSE-LETAIKLLSEMA 312
Query: 331 GEARKYAIKP--FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD 388
AR + P ++SVI LC V A ++ M+ G AVF +V+S + + GD
Sbjct: 313 --ARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGD 370
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHT 448
+ A M+ RGL D TYT L++G G+++EA +L E + + VTY
Sbjct: 371 LAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTV 430
Query: 449 LIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLK 508
LI GYCK+ + A + N+M V PNV Y L LC K D A +LL +M K
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLC-KQGDVCAANELLHEMCSK 489
Query: 509 GLHLNGIT 516
GL LN T
Sbjct: 490 GLELNIFT 497
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 162/355 (45%), Gaps = 9/355 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ LLKA+C++ K+ + L+D + + V+T I+ + + L + + A ++ +
Sbjct: 257 NILLKALCTAGRIKDAHQLFDEMASPPD----VVTYGIM---VHGYCTLSELETAIKLLS 309
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ G N Y I L A V E M+ G + D+ ++S FC+ G
Sbjct: 310 EMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKG 369
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
A + +++ + LI+ LC+ E +K A +L + + +
Sbjct: 370 DLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGE-LKEAERVLQEMEDKGLDVDAVTY 428
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+ +I C++ + A + +KM+ + P + ++ K GD+ A E+L M S
Sbjct: 429 TVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
+GL+ +++TY L++G G +E+A + + + + TY T+I C+ +E D
Sbjct: 489 KGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A LL EM D G++P + YN L+ C+ ++LLE M K +H N T
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSG-RVEGGKRLLEWMLEKNIHPNTTT 602
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 152/329 (46%), Gaps = 3/329 (0%)
Query: 194 VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWS 253
VL + +++ F + G AA F++ G A+ TY I L R A
Sbjct: 352 VLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAER 411
Query: 254 VCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC 313
V ++M + G D+ +I +CK GK EA +V+ +K++ P L LC
Sbjct: 412 VLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLC 471
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
++ + V A ++L + + + I ++S+I LC+ ++ A + M G P
Sbjct: 472 KQGD-VCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDV 530
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+ ++I A ++ ++ A +L+ M +G+KP + TY LM+G+ G++E +L
Sbjct: 531 YTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEW 590
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
+ + + TY++L++ YC + ++ M V PN + YN LI+ C KA
Sbjct: 591 MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHC-KAR 649
Query: 494 DWRTAEKLLEDMRLKGLHLNGIT-RALIR 521
+ + A +M KG L + ALIR
Sbjct: 650 NMKEALYFHSEMIEKGFRLTASSYNALIR 678
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 137/323 (42%), Gaps = 5/323 (1%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+ +C + KE +++E+ +K V V LI + K+GK AF V NK
Sbjct: 395 ALINGLCRAGELKEA---ERVLQEMEDKGLDVDAV-TYTVLIDGYCKVGKMTEAFLVHNK 450
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
N TY + L ++ A + +M G + +I+ CK G
Sbjct: 451 MVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGN 510
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
++A E + P +I +LCQ E + A +L + + K I ++
Sbjct: 511 LEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE-LDRAHSLLQEMLDKGIKPTIVTYN 569
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
++ C V G K LL M+ + P +NS++ Y +M E+ K M S+
Sbjct: 570 VLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQ 629
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
+ P+ TY L+ G+ M+EA +E + RL+ +Y+ LIR K ++F A
Sbjct: 630 EVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEA 689
Query: 463 LKLLNEMKDVGVQPNVDEYNKLI 485
+L +M+ + D YN I
Sbjct: 690 RRLFEKMRKERLTAEPDVYNFYI 712
Score = 38.5 bits (88), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 74/183 (40%), Gaps = 23/183 (12%)
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD----------MTPA 392
+V L ++D A+ +L + + P P IS Y P+
Sbjct: 152 AVAAHLAAVRDPGAARAILVRAL-RFPSPHRHFVEQFISTYKAFSSDPVSFDLLLLCLPS 210
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
+L +R G+ P + ++ ++EA ++ E + ++ +Y+ L++
Sbjct: 211 APLLLRLRQYGISPSPESCNAVLCRLP----LDEAVQLFQELPEKNT----CSYNILLKA 262
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
C A +L +EM P+V Y ++ C + + TA KLL +M +GL L
Sbjct: 263 LCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTLS-ELETAIKLLSEMAARGLEL 318
Query: 513 NGI 515
N +
Sbjct: 319 NPV 321
>gi|255584218|ref|XP_002532847.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527384|gb|EEF29525.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 505
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 135/320 (42%), Gaps = 26/320 (8%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
V I LI K G + A +FNK G+ VANQ TY I ++ + + +
Sbjct: 186 NVVIYTTLIDGCCKNGDVRRAKLLFNKMGEVNLVANQYTYTVLINGFFKKGLRKDGFELF 245
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
EKM G P+ +I+ FC GK +A+ ++ ++ + LIS LC
Sbjct: 246 EKMQLDGVFPNLYTYNCMINEFCNEGKLHKAYELFDEMCKRGVVSNVVTYNTLISGLC-- 303
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK-----TLLSKMISEGPP 370
RK I ++ + R +G L+ +M G
Sbjct: 304 ------------------RKTRIWEAEKLVDQMKRAGYSNGGNWVDVTDLVREMEERGIS 345
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P + + +A+ + GDM A M GL PDV+ Y L+ G G M+EA ++
Sbjct: 346 PSKVTYTILTNAHVRLGDMEKAFHFYSSMEKVGLVPDVHIYGVLLHGLCVKGNMKEASKL 405
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
+ + V Y+T+I GYCK AL+ L EM+D + PNV Y+ I LC
Sbjct: 406 FRSMAEMKLEPNEVVYNTMINGYCKAGNSFRALRFLKEMEDKRLVPNVASYSSTIGILC- 464
Query: 491 KALDWRTAEKLLEDMRLKGL 510
K W+ AE LL MR GL
Sbjct: 465 KDGKWQEAEILLNKMRGSGL 484
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 126/283 (44%), Gaps = 7/283 (2%)
Query: 253 SVCEKMIETGSLP----DSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
S+ E + E S+P S IIS + + G + A + + +K + ++ L
Sbjct: 65 SLLENLTEPISIPCPKISSLLYESIISVYIQSGSIELAVLYFNQMVDKGLVFEPNIFNTL 124
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
+ SL + KL + ++ G+ + + + +I+ C + LL+ + G
Sbjct: 125 LDSLVKSKCFEKLWF-VFNEVKGKI-ELDVYTYGIMIKGCCEAGVFYKGFELLTDLEKMG 182
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P ++ ++I K GD+ A + M L + YTYT L++G+ G ++
Sbjct: 183 LSPNVVIYTTLIDGCCKNGDVRRAKLLFNKMGEVNLVANQYTYTVLINGFFKKGLRKDGF 242
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
E+ + + + + TY+ +I +C + A +L +EM GV NV YN LI L
Sbjct: 243 ELFEKMQLDGVFPNLYTYNCMINEFCNEGKLHKAYELFDEMCKRGVVSNVVTYNTLISGL 302
Query: 489 CLKALDWRTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAI 531
C K W AEKL++ M+ G G + V+E+EE I
Sbjct: 303 CRKTRIWE-AEKLVDQMKRAGYSNGGNWVDVTDLVREMEERGI 344
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 147/332 (44%), Gaps = 38/332 (11%)
Query: 195 LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSV 254
L V N LI F G + F + C+ N TY I A + K D A+ +
Sbjct: 201 LNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKL 260
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
M G P+ +I+ C+ G+ +E V ++K + P V
Sbjct: 261 LRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLA-EMDRKGFAPDGVT--------- 310
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
+++++ C++ + H A L S+M+ G PP
Sbjct: 311 --------------------------YNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVV 344
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
+ S+I+ KAG++ AME M RGL+P+ TYT L++G++ G M+EA I +E
Sbjct: 345 TYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEM 404
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
++ + VTY+ L+ G+C + A+ LL M+ G+ P+V Y+ +I C + +
Sbjct: 405 IRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFC-RYQE 463
Query: 495 WRTAEKLLEDMRLKGLHLNGIT-RALIRAVKE 525
A ++ +M KG+ + IT +LI+ + E
Sbjct: 464 LDRAFQMNAEMVEKGVSPDAITYSSLIQGLCE 495
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 123/546 (22%), Positives = 234/546 (42%), Gaps = 65/546 (11%)
Query: 24 HCSQTLSLNISRSLSKPSLYRSSRFLSESPAANPKDESSFSPETDFSSRSFGENEYAQMD 83
HC + ++L+I L+K LY++++ L++ A N DE ++ + + +
Sbjct: 80 HC-KCIALHI---LTKFKLYKTAQNLAQDLAENSVDEKG-----NYFFQCLKDTYFMCNS 130
Query: 84 PSADAVESKEEEAYEIDGDKLENVLSLLQSSVDGYLESSLDSFELDLHEDFVLKVLETPL 143
SA + +Y +K N++ L + ++G++ L S+ L D +++ P+
Sbjct: 131 SSAVFDLVVKSCSYLNFIEKALNIVDL--AKLNGFMPGVL-SYNAIL--DSIVRC-RKPV 184
Query: 144 VLGENLVCFFKWVTSGV------VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTV 197
+ E + + + + SGV + L++ C++ G E+ + E E+ + + V
Sbjct: 185 IFAEKV--YREMIASGVSLNVFSYNILIRGFCAA-GNLEMGLRF---FEEMERNRCLPNV 238
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
N +I + KL + AF++ G G N TY I L R + V +
Sbjct: 239 VTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAE 298
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M G PD +++ +CK G +A V+++ + P LI+++C+
Sbjct: 299 MDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAG- 357
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
+ A++ D + ++S+I + + A + +MI G PP +N
Sbjct: 358 NLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYN 417
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME------------ 425
++++ + +G M A+ +L+ M +GL PDV +Y+ +++G+ +++
Sbjct: 418 ALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEK 477
Query: 426 -----------------------EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
EAC++ E TY +LI GYCK + + A
Sbjct: 478 GVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEA 537
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITR-ALIR 521
L L +EM G P+ YN LI L +A R A++LL + NGIT LI
Sbjct: 538 LNLHDEMIKKGFLPDTVTYNVLINGLNKQA-RTREAKRLLLKLFYDESIPNGITYDTLIE 596
Query: 522 AVKELE 527
+ ++E
Sbjct: 597 SCSDIE 602
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 152/386 (39%), Gaps = 60/386 (15%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K G A E F++ G N TY I S++ D A+ + ++MI +G
Sbjct: 349 LINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSG 408
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P +++ C G+ +EA + K + P + +I+ C+ E
Sbjct: 409 FPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQE----- 463
Query: 323 LDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
LD + E + + P +SS+I+ LC + ++ A L +M+++ P + S
Sbjct: 464 LDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTS 523
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT-------------------------- 412
+I+ Y K GD+ A+ + M +G PD TY
Sbjct: 524 LINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDE 583
Query: 413 ------------------------GLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHT 448
L+ G+ G M EA ++ K + + + Y+
Sbjct: 584 SIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNV 643
Query: 449 LIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLK 508
+I G+C+ A KL EM D G P+ L+++L + +D + + + +R
Sbjct: 644 IIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSC 703
Query: 509 GLHLNGITRALIRA-VKELEEDAIEN 533
L +++AL++ KE DA+ N
Sbjct: 704 KLSDAELSKALVQINHKEGNIDAVFN 729
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 163/356 (45%), Gaps = 17/356 (4%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ IC +E + D +K G V V N +I GK A E+
Sbjct: 208 NILVSGICKDGDVEEALEILDGMKLAGP----VPDVITYNSIIHALCVAGKVVEAAEILK 263
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
C + T+ ++ + + A V E+M LPD +++ C+ G
Sbjct: 264 TMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVG 320
Query: 282 KAKEAHVVYTLARE--KKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYA 337
+ + V + L E ++ Y P V+A+ L+ LC+ E ++ A ++ + S +
Sbjct: 321 QVQ---VAFYLLEEIVRQGYIPD-VIAYTSLVDGLCKSGE-IEEAHKLVKEMSVRGCRTG 375
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+ +SS++ CR +VH A+ +L++M+S P +N V+ K G ++ A+ ++
Sbjct: 376 VVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLIS 435
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
+ +RG PDV TY L+ G ++ EAC++ +E + VT +++ G C++
Sbjct: 436 DLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVG 495
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
D A L+ EM PNV Y LI LC K+ A +L+ MR +G+ L+
Sbjct: 496 RVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLC-KSDRMDDACMVLDAMRGQGVALD 550
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 152/339 (44%), Gaps = 12/339 (3%)
Query: 180 LWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI 239
L +++++ G+ ++T N LI F + + + A K G + T +
Sbjct: 155 LEEMIRKGGKSAPDIVT---YNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILV 211
Query: 240 EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
+ + + A + + M G +PD II C GK EA + K M
Sbjct: 212 SGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEIL-----KTMS 266
Query: 300 PPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGA 357
+V F L+ C+ + AL++L++ E + ++ ++ LCR+ V A
Sbjct: 267 CSPDLVTFNTLLDGFCKAG-MLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVA 325
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
LL +++ +G P + S++ K+G++ A +++K M RG + V Y+ L+SG
Sbjct: 326 FYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSG 385
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
Y G + +A EIL E + TY+ ++ G K A+ L++++ G P+
Sbjct: 386 YCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPD 445
Query: 478 VDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
V YN LI LC KA R A L ++M +G N +T
Sbjct: 446 VVTYNTLIDGLC-KANRVREACDLADEMASRGCFPNDVT 483
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 128/302 (42%), Gaps = 5/302 (1%)
Query: 209 KLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSE 268
K G+ A E ++ + + I L + D A + E M + P+
Sbjct: 74 KAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIV 133
Query: 269 KVGKIISWFCKGGKAKEAH-VVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLD 327
+IS CK G ++A ++ + R+ P V + + ++ A +
Sbjct: 134 TYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFRE 193
Query: 328 DFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG 387
+ + ++ +C+ DV A +L M GP P +NS+I A AG
Sbjct: 194 KMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAG 253
Query: 388 DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYH 447
+ A E+LK M PD+ T+ L+ G+ G + A E+L E + + +TY
Sbjct: 254 KVVEAAEILKTMSC---SPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYT 310
Query: 448 TLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRL 507
L+ G C++ + A LL E+ G P+V Y L+ LC K+ + A KL+++M +
Sbjct: 311 ILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLC-KSGEIEEAHKLVKEMSV 369
Query: 508 KG 509
+G
Sbjct: 370 RG 371
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 127/299 (42%), Gaps = 20/299 (6%)
Query: 246 KIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVV 305
+ FDWA + G D ++ K G VY P
Sbjct: 12 QFFDWAGE------QDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTF 65
Query: 306 AFLISSLCQEDETVKLA--LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSK 363
LI C+ + ++ L LD+FS Y F+ +I L + + A L
Sbjct: 66 KILIRGNCKAGQAMRALEFLRALDEFSVAPDVYI---FNVLIHGLFKDGNPDQAVKLFEN 122
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK--PDVYTYTGLMSGYANG 421
M S P +N+VIS K+G++ A E+L+ M +G K PD+ TY L++ +
Sbjct: 123 MESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRA 182
Query: 422 GQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEY 481
++ EAC + K +T + L+ G CK + + AL++L+ MK G P+V Y
Sbjct: 183 SRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITY 242
Query: 482 NKLIQSLCLKALDWRTAEKLLE-----DMRLKGLHLNGITRA--LIRAVKELEEDAIEN 533
N +I +LC+ AE L D+ L+G +A L RA++ LEE EN
Sbjct: 243 NSIIHALCVAGKVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCREN 301
>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 142/308 (46%), Gaps = 5/308 (1%)
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
+ A E+ N+ + C +E + R + A V KM + G P + +
Sbjct: 67 RPAEEMLNRMKEEKCRITEEIFLSICRGYGRVHMPLDAIRVFHKMNDFGCKPTDKSYISV 126
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSG 331
+ + + K A Y RE M QSVV+ LI +LC+ T+ A ++ +
Sbjct: 127 FAILVEENQLKVAMSFYKYMRE--MGVRQSVVSLNVLIKALCKNSGTIDAAFEIFREMPK 184
Query: 332 EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
+ ++I LC++ AK L +M ++G P ++ ++ +AG++
Sbjct: 185 RGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDE 244
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
AM + M+ + ++P+V+TY+ LM G G EA E+L + + + VTY TLI
Sbjct: 245 AMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLIN 304
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH 511
G CK + A++ L+ MK G++P+ Y K+I C ++ A L++M L +
Sbjct: 305 GLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFC-NIRKFQEAATYLDEMVLGQIS 363
Query: 512 LNGITRAL 519
N +T +L
Sbjct: 364 PNRVTWSL 371
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 154/364 (42%), Gaps = 45/364 (12%)
Query: 189 EKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYY------------ 236
++EK +T EI + + ++ A VF+K D+GC ++Y
Sbjct: 77 KEEKCRITEEIFLSICRGYGRVHMPLDAIRVFHKMNDFGCKPTDKSYISVFAILVEENQL 136
Query: 237 -----------------------FTIEALSRRK-IFDWAWSVCEKMIETGSLPDSEKVGK 272
I+AL + D A+ + +M + G PDS G
Sbjct: 137 KVAMSFYKYMREMGVRQSVVSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGT 196
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
+I+ CK GK EA ++ K P + L+ LCQ V A+ + D +
Sbjct: 197 LINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAG-NVDEAMGLFDKMKKK 255
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
A + + +SS++ LC+ A LL M+ + P ++++I+ K G + A
Sbjct: 256 AIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEA 315
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY------ 446
+E L M+ +GLKPD Y +++G+ N + +EA L+E + VT+
Sbjct: 316 VETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWSLHVKL 375
Query: 447 -HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
+ +++G C + + +L M+ G+ + ++ L++ C K D A ++ ++M
Sbjct: 376 NNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGTFDSLVKCFCKKG-DLHKAARIFDEM 434
Query: 506 RLKG 509
L G
Sbjct: 435 VLDG 438
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 119/280 (42%), Gaps = 11/280 (3%)
Query: 161 VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVF 220
++ L+KA+C + G + A ++I +E+ K LI KLGK A E+F
Sbjct: 158 LNVLIKALCKNSGT--IDAAFEIFREM-PKRGCDPDSYTYGTLINGLCKLGKTFEAKELF 214
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ GC + TY + L + D A + +KM + P+ ++ CK
Sbjct: 215 KEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKN 274
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
G + EA + + K+ P + LI+ LC+E + + A++ LD + K
Sbjct: 275 GGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAE-AVETLDRMKLQGLKPDAGL 333
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF-------NSVISAYSKAGDMTPAM 393
+ +I C ++ A T L +M+ P + N V+ G++ +
Sbjct: 334 YGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSF 393
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
++ MR+RG+ D T+ L+ + G + +A I +E
Sbjct: 394 QLYIGMRTRGISIDAGTFDSLVKCFCKKGDLHKAARIFDE 433
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 70/197 (35%), Gaps = 40/197 (20%)
Query: 352 KDVHGAKTLL---SKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR------ 402
+D+ AK + S S G + F +IS A + PA EML M+
Sbjct: 26 RDLRKAKIIFDSASAEYSNGFRHDHTTFGVMISKLVSANEFRPAEEMLNRMKEEKCRITE 85
Query: 403 -----------------------------GLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
G KP +Y + + Q++ A
Sbjct: 86 EIFLSICRGYGRVHMPLDAIRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKY 145
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLE-EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
++ R S V+ + LI+ CK D A ++ EM G P+ Y LI LC K
Sbjct: 146 MREMGVRQSVVSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLC-KL 204
Query: 493 LDWRTAEKLLEDMRLKG 509
A++L ++M KG
Sbjct: 205 GKTFEAKELFKEMDTKG 221
>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
Length = 894
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 132/296 (44%), Gaps = 9/296 (3%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V N LIA F + G + A ++ + NQ +Y I R A +
Sbjct: 416 VVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLV 475
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+MI G PD +G +I G+ EA +V E+++ P ++ LIS LC+
Sbjct: 476 EMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCK-- 533
Query: 317 ETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
K L + E + ++P ++++I R + A+ + M +G
Sbjct: 534 ---KRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRD 590
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+N++I Y K+G M A+ + MR G PD +TYT L+ GYA G ++ A L
Sbjct: 591 IVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLC 650
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ K + + VTY +LI GYC + D A L M+ G+ PNV Y LI SL
Sbjct: 651 DMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSL 706
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 134/322 (41%), Gaps = 37/322 (11%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G N + Y I AL + + A +V +M+ + PD +I+ FC+ G +EA
Sbjct: 376 GLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEA 435
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR------------ 334
+ A +++ P Q LI C E V +A D+L + G
Sbjct: 436 LKLLREAIRRELEPNQLSYTPLIHGFCVRGE-VMVASDLLVEMIGRGHTPDVVTLGALIH 494
Query: 335 -------------------KYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
+ + P ++ +I LC+ + + AK LL +M+ + P
Sbjct: 495 GLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQP 554
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
V+ ++I + ++ ++ A ++ + M +G D+ Y ++ GY G M EA +
Sbjct: 555 DKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCM 614
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
+ +K TY TLI GY K + AL+ L +M +PN+ Y LI C
Sbjct: 615 SSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYC-N 673
Query: 492 ALDWRTAEKLLEDMRLKGLHLN 513
+ +AE L M+ +GL N
Sbjct: 674 IGNTDSAEVLFASMQSEGLFPN 695
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 116/244 (47%), Gaps = 2/244 (0%)
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
G +P + +I +C+ G ++ K + P +I L ++ + K+
Sbjct: 306 GCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKI 365
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
+L + ++ +++VI +LC+ + A +L++M++ P FN++I+
Sbjct: 366 E-SLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIA 424
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
A+ + GD+ A+++L+ R L+P+ +YT L+ G+ G++ A ++L E
Sbjct: 425 AFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTP 484
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
VT LI G + D AL + +M + V P+ + YN LI LC K + A+ L
Sbjct: 485 DVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRM-LSAAKNL 543
Query: 502 LEDM 505
L +M
Sbjct: 544 LVEM 547
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 140/357 (39%), Gaps = 45/357 (12%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI + + G + + G + TY I L R+ S+ +M E
Sbjct: 315 NVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKE 374
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ + +I CK A +A V + P LI++ C+E + V+
Sbjct: 375 RGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGD-VE 433
Query: 321 LALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA-- 374
AL +L EA + ++P ++ +I C +V A LL +MI G P
Sbjct: 434 EALKLLR----EAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTL 489
Query: 375 ---------------------------------VFNSVISAYSKAGDMTPAMEMLKLMRS 401
++N +IS K ++ A +L M
Sbjct: 490 GALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLE 549
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
+ ++PD + YT L+ G+ ++ +A +I ++ V Y+ +I+GYCK +
Sbjct: 550 QKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNE 609
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRA 518
A+ ++ M+ VG P+ Y LI K D + A + L DM + N +T A
Sbjct: 610 AVMCMSSMRKVGCIPDEFTYTTLIDGYAKKG-DIKAALRFLCDMMKRRCKPNIVTYA 665
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 133/341 (39%), Gaps = 29/341 (8%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V L LI G+ A V K + + + Y I L ++++ A ++
Sbjct: 486 VVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLV 545
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQ 314
+M+E PD +I F + K +A ++ EK Y + +VA+ +I C+
Sbjct: 546 EMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGY--RDIVAYNAMIKGYCK 603
Query: 315 EDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
+ + M RK P ++++I + D+ A L M+
Sbjct: 604 SGMMNEAVMCM-----SSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCK 658
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P + S+I Y G+ A + M+S GL P+V YT L+ + +A
Sbjct: 659 PNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAY 718
Query: 431 LNEAKKNHSRLSPVTYHTLIRGY--CK-------LEEFDCALK---LLNEMKDV---GVQ 475
NH + T H L+ G C+ + D A K LL+ K + G+
Sbjct: 719 FEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLD 778
Query: 476 PNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
P + YN +I SLC + + E L E M KG + +T
Sbjct: 779 PRISAYNAIIFSLCRHNMLGKAME-LKEKMSNKGCLPDPVT 818
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 1/173 (0%)
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
++R LC V + L+ EG PG +N +I Y + GD+ + +L M +G
Sbjct: 282 MVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKG 341
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
+ P V TY ++ + + +L E K+ + Y+T+I CK AL
Sbjct: 342 IMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQAL 401
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+LN+M P+V +N LI + C + D A KLL + + L N ++
Sbjct: 402 AVLNQMVASRFDPDVVTFNTLIAAFCREG-DVEEALKLLREAIRRELEPNQLS 453
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 123/284 (43%), Gaps = 22/284 (7%)
Query: 154 KWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKG 213
K+V + ++D +++ S +K + E E++ G + N +I + K G
Sbjct: 556 KFVYTTLIDGFIRSDKLSDARK--------IFEFMEEKGGYRDIVAYNAMIKGYCKSGMM 607
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
A + GC+ ++ TY I+ +++ A M++ P+ +
Sbjct: 608 NEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASL 667
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLAL---DMLDDF- 329
I +C G A V++ + + ++P LI SL ++D+ ++ A ML +
Sbjct: 668 ICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHC 727
Query: 330 --SGEARKYAIKPFSS----VIRSLCRMKD-VHGAKTLLS---KMISEGPPPGNAVFNSV 379
+ Y + ++ +I S C D H LL +IS+G P + +N++
Sbjct: 728 SPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYNAI 787
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
I + + + AME+ + M ++G PD T+ L+ G+++ G+
Sbjct: 788 IFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLYGFSSVGK 831
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 119/246 (48%), Gaps = 9/246 (3%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFS 330
++ C G+ K+AH ++ +M P VV + ++ C E ++ A+ +L + +
Sbjct: 259 LLKALCTAGRIKDAHQLF-----DEMASPPDVVTYGIMVHGYCTLSE-LETAIKLLSEMA 312
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
+ ++SVI LC V A ++ M+ G AVF +V+S + + GD+
Sbjct: 313 ARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLA 372
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A M+ RGL D TYT L++G G+++EA +L E + + VTY LI
Sbjct: 373 AARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLI 432
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
GYCK+ + A + N+M V PNV Y L LC K D A +LL +M KGL
Sbjct: 433 DGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLC-KQGDVCAANELLHEMCSKGL 491
Query: 511 HLNGIT 516
LN T
Sbjct: 492 ELNIFT 497
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 162/355 (45%), Gaps = 9/355 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ LLKA+C++ K+ + L+D + + V+T I+ + + L + + A ++ +
Sbjct: 257 NILLKALCTAGRIKDAHQLFDEMASPPD----VVTYGIM---VHGYCTLSELETAIKLLS 309
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ G N Y I L A V E M+ G + D+ ++S FC+ G
Sbjct: 310 EMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKG 369
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
A + +++ + LI+ LC+ E +K A +L + + +
Sbjct: 370 DLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGE-LKEAERVLQEMEDKGLDVDAVTY 428
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+ +I C++ + A + +KM+ + P + ++ K GD+ A E+L M S
Sbjct: 429 TVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
+GL+ +++TY L++G G +E+A + + + + TY T+I C+ +E D
Sbjct: 489 KGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A LL EM D G++P + YN L+ C+ ++LLE M K +H N T
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSG-RVEGGKRLLEWMLEKNIHPNTTT 602
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 152/329 (46%), Gaps = 3/329 (0%)
Query: 194 VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWS 253
VL + +++ F + G AA F++ G A+ TY I L R A
Sbjct: 352 VLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAER 411
Query: 254 VCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC 313
V ++M + G D+ +I +CK GK EA +V+ +K++ P L LC
Sbjct: 412 VLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLC 471
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
++ + V A ++L + + + I ++S+I LC+ ++ A + M G P
Sbjct: 472 KQGD-VCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDV 530
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+ ++I A ++ ++ A +L+ M +G+KP + TY LM+G+ G++E +L
Sbjct: 531 YTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEW 590
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
+ + + TY++L++ YC + ++ M V PN + YN LI+ C KA
Sbjct: 591 MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHC-KAR 649
Query: 494 DWRTAEKLLEDMRLKGLHLNGIT-RALIR 521
+ + A +M KG L + ALIR
Sbjct: 650 NMKEALYFHSEMIEKGFRLTASSYNALIR 678
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 137/323 (42%), Gaps = 5/323 (1%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+ +C + KE +++E+ +K V V LI + K+GK AF V NK
Sbjct: 395 ALINGLCRAGELKEA---ERVLQEMEDKGLDVDAV-TYTVLIDGYCKVGKMTEAFLVHNK 450
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
N TY + L ++ A + +M G + +I+ CK G
Sbjct: 451 MVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGN 510
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
++A E + P +I +LCQ E + A +L + + K I ++
Sbjct: 511 LEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE-LDRAHSLLQEMLDKGIKPTIVTYN 569
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
++ C V G K LL M+ + P +NS++ Y +M E+ K M S+
Sbjct: 570 VLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQ 629
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
+ P+ TY L+ G+ M+EA +E + RL+ +Y+ LIR K ++F A
Sbjct: 630 EVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEA 689
Query: 463 LKLLNEMKDVGVQPNVDEYNKLI 485
+L +M+ + D YN I
Sbjct: 690 RRLFEKMRKDRLTAEPDVYNFYI 712
Score = 38.9 bits (89), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 74/183 (40%), Gaps = 23/183 (12%)
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD----------MTPA 392
+V L ++D A+ +L + + P P IS Y P+
Sbjct: 152 AVAAHLAAVRDPGAARAILVRAL-RFPSPHRHFVEQFISTYKAFSSDPVSFDLLLLCLPS 210
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
+L +R G+ P + ++ ++EA ++ E + ++ +Y+ L++
Sbjct: 211 APLLLRLRQYGISPSPESCNAVLCRLP----LDEAVQLFQELPEKNT----CSYNILLKA 262
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
C A +L +EM P+V Y ++ C + + TA KLL +M +GL L
Sbjct: 263 LCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTLS-ELETAIKLLSEMAARGLEL 318
Query: 513 NGI 515
N +
Sbjct: 319 NPV 321
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 153/357 (42%), Gaps = 11/357 (3%)
Query: 151 CFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKL 210
CF VT L+ +C E L + +K+ G VL LI+ F
Sbjct: 64 CFPNSVTC---TTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVL----YGTLISGFCNN 116
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G E+F++ G AN TY + L R + A +V M E G PD
Sbjct: 117 GNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTY 176
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
+I CK G+A A + L EK P L+S LC+E + A +L
Sbjct: 177 TGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVID-AFKILRMMI 235
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP--PPGNAVFNSVISAYSKAGD 388
+ +K + ++++++ LC V A L + M P FN +I K G
Sbjct: 236 EKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGR 295
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHT 448
+T A+++ + M +G ++ TY L+ G G+++EA E+ + + TY
Sbjct: 296 LTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSI 355
Query: 449 LIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
LI G+CK+ + A L EM+ G+ P + +YN L+ SLC K A+ L ++M
Sbjct: 356 LIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLC-KEGSLEQAKSLFQEM 411
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 118/258 (45%), Gaps = 3/258 (1%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
+Y I L + K A + +M G P+S ++ CK G+ EA +
Sbjct: 35 SYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAM 94
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
++K + LIS C + + ++ D+ G+ + +S ++ LCR+
Sbjct: 95 KKKGFDADVVLYGTLISGFCN-NGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQ 153
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
A T+L+ M G P + +I K G T AM++L LM +G +P TY
Sbjct: 154 WKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNV 213
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD-- 471
L+SG G + +A +IL + + VTY+TL++G C + D ALKL N M D
Sbjct: 214 LLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNE 273
Query: 472 VGVQPNVDEYNKLIQSLC 489
++PNV +N LI LC
Sbjct: 274 NCLEPNVFTFNMLIGGLC 291
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 93/183 (50%), Gaps = 1/183 (0%)
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
++ LC+ + A+ ++ + ++ I ++++I LC+ K + A LL +M +
Sbjct: 3 IVLKGLCRNGGVFE-AMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
G P + +++ K G M AME+L+ M+ +G DV Y L+SG+ N G ++
Sbjct: 62 AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
E+ +E + VTY L+ G C+L ++ A +LN M + G+ P+V Y LI
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181
Query: 487 SLC 489
LC
Sbjct: 182 GLC 184
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 1/228 (0%)
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALD 324
PD +I+ CK K KEA + +P L+ LC+ D + A++
Sbjct: 31 PDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCK-DGRMDEAME 89
Query: 325 MLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
+L+ + + + ++I C ++ K L +M+ +G ++ ++
Sbjct: 90 LLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLC 149
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV 444
+ G A +L M G+ PDV TYTGL+ G G+ A ++LN + S V
Sbjct: 150 RLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNV 209
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
TY+ L+ G CK A K+L M + G + +V YN L++ LC K
Sbjct: 210 TYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKG 257
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 142/337 (42%), Gaps = 21/337 (6%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ LL +C + + + ++ E G+K V N L+ GK A ++FN
Sbjct: 212 NVLLSGLCKEGLVIDAFKILRMMIEKGKKAD----VVTYNTLMKGLCDKGKVDEALKLFN 267
Query: 222 K-FGDYGCV-ANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
F + C+ N T+ I L + A + KM++ GS + ++ K
Sbjct: 268 SMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLK 327
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSG---EARKY 336
GK KEA ++ + P + LI C+ + ML+ G E R +
Sbjct: 328 AGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCK--------MRMLNIAKGLFCEMRTH 379
Query: 337 AIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
+ P +++++ SLC+ + AK+L +M + P FN++I KAGD
Sbjct: 380 GLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFV 439
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
E+ M GL+PD T++ L++ + G+++EA L + + Y +L++G
Sbjct: 440 KELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKG 499
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + LL++M G + + ++ LC
Sbjct: 500 LSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLC 536
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 1/221 (0%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
++ C+ G EA + K + P LI+ LC+ + +K A+ +L +
Sbjct: 4 VLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKK-LKEAVGLLLEMEAA 62
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
++++ LC+ + A LL M +G ++ ++IS + G++
Sbjct: 63 GCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRG 122
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
E+ M +G+ +V TY+ L+ G GQ +EA +LN ++ VTY LI G
Sbjct: 123 KELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDG 182
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
CK A+ LLN M + G +P+ YN L+ LC + L
Sbjct: 183 LCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGL 223
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 143/366 (39%), Gaps = 42/366 (11%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K G+ A ++ N + G + TY + L + + A+ + MIE G
Sbjct: 179 LIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKG 238
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYT--LAREKKMYPPQSVVAFLISSLCQED---E 317
D ++ C GK EA ++ E + P LI LC+E +
Sbjct: 239 KKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTK 298
Query: 318 TVKLALDMLDDFS------------GEARKYAIK-------------------PFSSVIR 346
VK+ M+ S G + IK +S +I
Sbjct: 299 AVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILID 358
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
C+M+ ++ AK L +M + G P +N+++++ K G + A + + M + +P
Sbjct: 359 GFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEP 418
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
D+ ++ ++ G G + E+ + + R +T+ TLI KL E D A L
Sbjct: 419 DIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSAL 478
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN-----GITRALIR 521
M G P+ Y+ L++ L K D LL M KG L+ I L
Sbjct: 479 ERMVASGFTPDALVYDSLLKGLSSKG-DTTEIINLLHQMAAKGTVLDRKIVSTILTCLCH 537
Query: 522 AVKELE 527
+++E++
Sbjct: 538 SIQEVD 543
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 154/342 (45%), Gaps = 13/342 (3%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
LL A C G ++ AL D ++ G E ++T N LI G A + +
Sbjct: 292 LLDATCKESGYRQAMALLDEMRAKG-CEPDIVT---YNVLINAMCNEGDVDEALNILSNL 347
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
+GC + TY +++L + + + +M PD I++ C+ G
Sbjct: 348 PSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLV 407
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP--- 340
A V E + ++ LC V A+++L + Y KP
Sbjct: 408 DRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGR-VDDAVELLSRL----KSYGCKPDTI 462
Query: 341 -FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
+++V++ LC + A+ L+++M+ PP FN+V+++ + G + A+ +++ M
Sbjct: 463 AYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQM 522
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
G PD+ TY ++ G N +++A E+L++ + + VT++TL++G C ++ +
Sbjct: 523 SENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRW 582
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+ A +L+ M P+ +N +I SLC K L + E L
Sbjct: 583 EDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETL 624
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 153/327 (46%), Gaps = 9/327 (2%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFT--IEALSRRKIFDWAWS 253
TV N ++ + + G+ + A + N G +T+ F I AL R A +
Sbjct: 218 TVVTYNTMVNGYCRAGRIEDARRLIN-----GMPFPPDTFTFNPLIRALCVRGRIPDALA 272
Query: 254 VCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC 313
V + M+ G P ++ CK ++A + R K P LI+++C
Sbjct: 273 VFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMC 332
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
E + V AL++L + K ++ V++SLC + + LL++M S P
Sbjct: 333 NEGD-VDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDE 391
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
FN+++++ + G + A+E++ M G D+ TY+ ++ G + G++++A E+L+
Sbjct: 392 VTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSR 451
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
K + + Y T+++G C E+++ A +L+ EM P+ +N ++ SLC K L
Sbjct: 452 LKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGL 511
Query: 494 DWRTAEKLLEDMRLKGLHLNGITRALI 520
R A +++E M G + +T I
Sbjct: 512 VDR-AIRVVEQMSENGCSPDIVTYNCI 537
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 142/342 (41%), Gaps = 39/342 (11%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N LI G+ A VF+ GC + TY ++A + + A ++ ++M
Sbjct: 254 FNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMR 313
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEA---------------HVVYT------------- 291
G PD +I+ C G EA V YT
Sbjct: 314 AKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWK 373
Query: 292 -----LAR--EKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSV 344
LA P + +++SLCQ+ V A++++D S I +SS+
Sbjct: 374 EVEELLAEMTSNNCAPDEVTFNTIVTSLCQQG-LVDRAIEVVDHMSEHGCVADIVTYSSI 432
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
+ LC + V A LLS++ S G P + +V+ A E++ M
Sbjct: 433 LDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDC 492
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
PD T+ +++ G ++ A ++ + +N VTY+ +I G C D A++
Sbjct: 493 PPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAME 552
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLCLKALD-WRTAEKLLEDM 505
LL++++ G +P++ +N L++ LC +D W AE+L+ +M
Sbjct: 553 LLSDLQSCGCKPDIVTFNTLLKGLC--GVDRWEDAEQLMANM 592
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 122/291 (41%), Gaps = 7/291 (2%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N ++A + G A V + + GC + TY I+ L D A + +
Sbjct: 499 FNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQ 558
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
G PD ++ C + ++A + P + +I+SLCQ+
Sbjct: 559 SCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLT 618
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
+ A++ L + +S V+ +L + A LLS M + P +N+V
Sbjct: 619 Q-AIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGTP--DLITYNTV 675
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
IS +KAG M A+++L++M S GL PD TY L G + A +L + +
Sbjct: 676 ISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQD--T 733
Query: 440 RLSPVT--YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
LSP T Y+ ++ G+C+ D A+ M G P+ Y L+++L
Sbjct: 734 GLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEAL 784
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 150/346 (43%), Gaps = 10/346 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ A+C+ E + + G K V +L L + K E+
Sbjct: 325 NVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGS----ERWKEVEELLA 380
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ C ++ T+ + +L ++ + D A V + M E G + D I+ C G
Sbjct: 381 EMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVG 440
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
+ +A V L+R K +A+ ++ LC ++ + M + + +
Sbjct: 441 RVDDA--VELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVT 498
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
F++V+ SLC+ V A ++ +M G P +N +I + AME+L +
Sbjct: 499 -FNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDL 557
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
+S G KPD+ T+ L+ G + E+A +++ +++ +T++T+I C+
Sbjct: 558 QSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLL 617
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
A++ L M + G PN Y+ ++ +L LKA + A +LL M
Sbjct: 618 TQAIETLKIMAENGCVPNSSTYSIVVDAL-LKAGKAQAALELLSGM 662
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 115/248 (46%), Gaps = 19/248 (7%)
Query: 256 EKMIETGSLPDSEKV-------------GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQ 302
+++ G + D+E+V +++ +C+ G+ ++A + +PP
Sbjct: 195 KRLCSDGRVSDAERVFAALGPSATVVTYNTMVNGYCRAGRIEDARRLI----NGMPFPPD 250
Query: 303 SVV-AFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLL 361
+ LI +LC + AL + DD ++ +S ++ + C+ A LL
Sbjct: 251 TFTFNPLIRALCVRGR-IPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALL 309
Query: 362 SKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG 421
+M ++G P +N +I+A GD+ A+ +L + S G KPD TYT ++
Sbjct: 310 DEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGS 369
Query: 422 GQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEY 481
+ +E E+L E N+ VT++T++ C+ D A+++++ M + G ++ Y
Sbjct: 370 ERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTY 429
Query: 482 NKLIQSLC 489
+ ++ LC
Sbjct: 430 SSILDGLC 437
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 115/265 (43%), Gaps = 13/265 (4%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETG--SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREK 296
+ +L +R D A + + M G + P +I C G+ +A V+
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFA----- 211
Query: 297 KMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDV 354
+ P +VV + +++ C+ ++ A +++ + P IR+LC +
Sbjct: 212 ALGPSATVVTYNTMVNGYCRAGR-IEDARRLINGMPFPPDTFTFNPL---IRALCVRGRI 267
Query: 355 HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
A + M+ G P ++ ++ A K AM +L MR++G +PD+ TY L
Sbjct: 268 PDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVL 327
Query: 415 MSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV 474
++ N G ++EA IL+ + + VTY +++ C E + +LL EM
Sbjct: 328 INAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNC 387
Query: 475 QPNVDEYNKLIQSLCLKALDWRTAE 499
P+ +N ++ SLC + L R E
Sbjct: 388 APDEVTFNTIVTSLCQQGLVDRAIE 412
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 102/259 (39%), Gaps = 3/259 (1%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A E+ + GC + T+ ++ L ++ A + M+ + PD +I+
Sbjct: 550 AMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVIT 609
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
C+ G +A + E P S + ++ +L + + + AL++L +
Sbjct: 610 SLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGK-AQAALELLSGMTNGTPD 668
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+++VI +L + + A LL M+S G P + S+ + A+ M
Sbjct: 669 LIT--YNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRM 726
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
L+ ++ GL PD Y ++ G+ + + A + + TY L+
Sbjct: 727 LRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAY 786
Query: 456 LEEFDCALKLLNEMKDVGV 474
D A +LL + +GV
Sbjct: 787 GGLLDEAKRLLASLCSLGV 805
>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Glycine max]
Length = 642
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 146/305 (47%), Gaps = 5/305 (1%)
Query: 200 LNELIALFSKLGK-GKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
N LI+ K G G+AA V N F GCV N+ TY + L + + A S+ +M
Sbjct: 243 FNVLISALCKKGDLGRAAKLVDNMFLK-GCVPNEVTYNALVHGLCLKGKLEKAVSLLNQM 301
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+ +P+ G +I+ F G+A + V + + V + LIS LC+E +
Sbjct: 302 VSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGK- 360
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
A+++ + G+ +S++I LCR + A+ LS+M ++G P + ++S
Sbjct: 361 FNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSS 420
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
++ Y +AGD A+ + K M + + Y+ L++G G+ EA + +
Sbjct: 421 LMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRG 480
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG--VQPNVDEYNKLIQSLCLKALDWR 496
+L V Y ++I G+C + LKL N+M G VQP+V YN L+ + C++ +R
Sbjct: 481 IKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFR 540
Query: 497 TAEKL 501
+ L
Sbjct: 541 AIDIL 545
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 152/333 (45%), Gaps = 12/333 (3%)
Query: 202 ELIALFSKLGKG---KAAFEVFNK-FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
I +F GK + A ++F++ +G++ C +++ + + + +F+ A
Sbjct: 98 NFIVMFKAYGKAHLPEKAVDLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNH 157
Query: 258 MIETGSL---PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
++ + SL P++ +I C+ G +A V+ + P + L+ LC+
Sbjct: 158 VVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCK 217
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
E E + A+ +LD+ E + F+ +I +LC+ D+ A L+ M +G P
Sbjct: 218 E-ERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEV 276
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
+N+++ G + A+ +L M S P+ T+ L++G+ G+ + +L
Sbjct: 277 TYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSL 336
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA-L 493
+ R + Y +LI G CK +F+ A++L EM G PN Y+ LI LC + L
Sbjct: 337 EARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKL 396
Query: 494 DWRTAEKLLEDMRLKGLHLNGIT-RALIRAVKE 525
D A L +M+ KG N T +L+R E
Sbjct: 397 D--EARGFLSEMKNKGYLPNSFTYSSLMRGYFE 427
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 133/324 (41%), Gaps = 34/324 (10%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N +I +LG A EVF + C + TY + L + + D A S+ ++M
Sbjct: 173 FNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQ 232
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---D 316
G+ P+ +IS CK G A + K P + L+ LC + +
Sbjct: 233 VEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLE 292
Query: 317 ETVKLALDMLDD-----------------------------FSGEARKYAIKPF--SSVI 345
+ V L M+ + S EAR + + SS+I
Sbjct: 293 KAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLI 352
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
LC+ + A L +M+ +G P V++++I + G + A L M+++G
Sbjct: 353 SGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYL 412
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
P+ +TY+ LM GY G +A + E N+ + V Y LI G CK +F AL +
Sbjct: 413 PNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMV 472
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLC 489
+M G++ +V Y+ +I C
Sbjct: 473 WKQMLSRGIKLDVVAYSSMIHGFC 496
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 94/214 (43%), Gaps = 3/214 (1%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+ + LI+ K GK A E++ + GC N Y I+ L R D A +M
Sbjct: 347 VYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEM 406
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
G LP+S ++ + + G + +A +V+ + + LI+ LC++ +
Sbjct: 407 KNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKF 466
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP--PPGNAVF 376
++ AL + K + +SS+I C V L ++M+ +GP P +
Sbjct: 467 ME-ALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITY 525
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
N +++A+ + A+++L +M +G PD T
Sbjct: 526 NILLNAFCIQKSIFRAIDILNIMLDQGCDPDFIT 559
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 132/286 (46%), Gaps = 10/286 (3%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
T+ I L F+ + + +KM ++G P ++ W+CK G+ K A +
Sbjct: 195 TFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM 254
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLC 349
+ K + LI LC+ + K L + D RK I P ++++I
Sbjct: 255 KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRD-----MRKRMIHPNEVTYNTLINGFS 309
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
V A LL++M+S G P + FN++I + G+ A++M +M ++GL P
Sbjct: 310 NEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEV 369
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
+Y L+ G + + A K+N + +TY +I G CK D A+ LLNEM
Sbjct: 370 SYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 429
Query: 470 KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
G+ P++ Y+ LI C K ++TA++++ + GL NGI
Sbjct: 430 SKDGIDPDIVTYSALINGFC-KVGRFKTAKEIVCRIYRVGLSPNGI 474
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 114/269 (42%), Gaps = 7/269 (2%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G + TY I+ L + D A + +M + G PD +I+ FCK G+ K A
Sbjct: 398 GVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTA 457
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFSS 343
+ + P + + LI + C+ E +++ M+ G R + F+
Sbjct: 458 KEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMI--LEGHTRDHF--TFNV 513
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
++ SLC+ V A+ + M S+G P F+ +I+ Y +G+ A + M G
Sbjct: 514 LVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 573
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
P +TY L+ G GG + EA + L + + V Y+TL+ CK A+
Sbjct: 574 HHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAV 633
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
L EM + P+ Y LI LC K
Sbjct: 634 SLFGEMVQRSILPDSYTYTSLISGLCRKG 662
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 144/360 (40%), Gaps = 17/360 (4%)
Query: 127 ELDLHEDFVLKVLETPLVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKE 186
E DL F ++ + N VC + +G++D L C + E L + + +
Sbjct: 383 EFDLARGFYMR-------MKRNGVCVGRITYTGMIDGL----CKNGFLDEAVVLLNEMSK 431
Query: 187 IGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRK 246
G V ++N F K+G+ K A E+ + G N Y I R
Sbjct: 432 DGIDPDIVTYSALING----FCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG 487
Query: 247 IFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVA 306
A + E MI G D +++ CK GK EA + P
Sbjct: 488 CLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFD 547
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
LI+ E +K A + D+ + + S+++ LC+ + A+ L + +
Sbjct: 548 CLINGYGNSGEGLK-AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHA 606
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
++N++++A K+G++ A+ + M R + PD YTYT L+SG G+
Sbjct: 607 VPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVI 666
Query: 427 ACEILNEAKKNHSRL-SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
A EA+ + L + V Y + G K ++ + +M ++G P++ N +I
Sbjct: 667 AILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMI 726
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 139/351 (39%), Gaps = 48/351 (13%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I +S++GK + ++ + G+ N TY + S+RK ++ + +I
Sbjct: 723 NAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIIL 782
Query: 261 TGSLPDSEKVGKIISWFCK------GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
G LPD ++ C+ G K +A + + ++ + LIS C
Sbjct: 783 NGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFN------MLISKCCA 836
Query: 315 EDETVKLALDMLDDFSG-------------------------------EARKYAIKP--- 340
E + A D++ + E K I P
Sbjct: 837 NGE-INWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESR 895
Query: 341 -FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
+ +I LCR+ D+ A + +MI+ P N ++++ A +K G A +L+ M
Sbjct: 896 KYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFM 955
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
L P + ++T LM G + EA E+ +L V+Y+ LI G C +
Sbjct: 956 LKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDM 1015
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
A +L EMK G N Y LI+ L + + A+ +L+D+ +G
Sbjct: 1016 ALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGF 1066
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+ F+ +I LC + L+ KM G P +N+V+ Y K G A+E+L
Sbjct: 193 VATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLD 252
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M+S+G+ DV TY L+ ++ + +L + +K + VTY+TLI G+
Sbjct: 253 HMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEG 312
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+ A +LLNEM G+ PN +N LI + +++ A K+ M KGL
Sbjct: 313 KVLIASQLLNEMLSFGLSPNHVTFNALIDGH-ISEGNFKEALKMFYMMEAKGL 364
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 1/149 (0%)
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P N+++ + K+G+ LK M R + PDV T+ L++ G E++
Sbjct: 153 GFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKS 212
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
++ + +K+ + VTY+T++ YCK F A++LL+ MK GV +V YN LI
Sbjct: 213 SYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHD 272
Query: 488 LCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
LC ++ LL DMR + +H N +T
Sbjct: 273 LC-RSNRIAKGYLLLRDMRKRMIHPNEVT 300
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 126/307 (41%), Gaps = 34/307 (11%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N L+ K GK A E G + N ++ I A+SV ++M
Sbjct: 511 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 570
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEA-------HVVYTLAREKKMYPPQSVVAFLISSL 312
+ G P G ++ CKGG +EA H V A + MY L++++
Sbjct: 571 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAV-PAAVDTVMYNT------LLTAM 623
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMIS-E 367
C+ K GE + +I P ++S+I LCR KT+++ + + E
Sbjct: 624 CKSGNLAKAV-----SLFGEMVQRSILPDSYTYTSLISGLCR-----KGKTVIAILFAKE 673
Query: 368 GPPPGNAVFNSV-----ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG 422
GN + N V + KAG + + M + G PD+ T ++ GY+ G
Sbjct: 674 AEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMG 733
Query: 423 QMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
++E+ ++L E + + TY+ L+ GY K ++ + L + G+ P+ +
Sbjct: 734 KIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCH 793
Query: 483 KLIQSLC 489
L+ +C
Sbjct: 794 SLVLGIC 800
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 2/163 (1%)
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+ L +M+ P A FN +I+ G + +++ M G P + TY ++ Y
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 238
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G+ + A E+L+ K TY+ LI C+ LL +M+ + PN
Sbjct: 239 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 298
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALI 520
YN LI + A +LL +M GL N +T ALI
Sbjct: 299 VTYNTLINGFSNEG-KVLIASQLLNEMLSFGLSPNHVTFNALI 340
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 98/254 (38%)
Query: 235 YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR 294
Y + A+ + A S+ +M++ LPDS +IS C+ GK A + A
Sbjct: 616 YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE 675
Query: 295 EKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDV 354
+ P V+ + K + + I +++I RM +
Sbjct: 676 ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 735
Query: 355 HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
LL +M ++ P +N ++ YSK D++ + + + + G+ PD T L
Sbjct: 736 EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 795
Query: 415 MSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV 474
+ G +E +IL + T++ LI C E + A L+ M +G+
Sbjct: 796 VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 855
Query: 475 QPNVDEYNKLIQSL 488
+ D + ++ L
Sbjct: 856 SLDKDTCDAMVSVL 869
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 144/327 (44%), Gaps = 5/327 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ LL CSS KE ++ + G E V+T N L+ K G+ A +VF+
Sbjct: 245 NCLLHGYCSSGKPKEAIGIFRKMCRDGV-EPDVVTY---NTLMVYLCKNGRSMEARKVFD 300
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G + Y + + + + M+ G+ PD +I + K G
Sbjct: 301 SMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHG 360
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
EA + ++ R++ ++P ++ +LC+ + V A+ D E F
Sbjct: 361 MVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGK-VDDAMSQFDRLISEGLTPNGVVF 419
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
++I LC A+ L +MI G P FN++++ K G +T A + LM
Sbjct: 420 RTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVR 479
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
++ DV TYT L+ GY G+++EA ++L + + + VTY+T+I GYCK +
Sbjct: 480 VDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIED 539
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSL 488
A L +M GV P + Y+ ++ L
Sbjct: 540 ACSLFRQMASKGVNPGIVIYSTILHGL 566
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 127/314 (40%), Gaps = 5/314 (1%)
Query: 176 EVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETY 235
+ Y L+D + + G + N L+ + GK K A +F K G + TY
Sbjct: 224 KAYCLFDEMLDQGMSPNCI----TYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTY 279
Query: 236 YFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE 295
+ L + A V + M++ G PDS G ++ + G + H + +
Sbjct: 280 NTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVR 339
Query: 296 KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVH 355
P + LI + + V A+ + I + +V+ +LCR+ V
Sbjct: 340 NGTQPDHYIFNILIGAYAKHG-MVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVD 398
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
A + ++ISEG P VF ++I A E+ M RG+ P+ + L+
Sbjct: 399 DAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLL 458
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
+ G + A I + + + +TY TLI GYC + D A KLL M GV+
Sbjct: 459 NHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVK 518
Query: 476 PNVDEYNKLIQSLC 489
PN YN +I C
Sbjct: 519 PNEVTYNTIINGYC 532
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 149/345 (43%), Gaps = 6/345 (1%)
Query: 176 EVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETY 235
+++ L D++ G + I N LI ++K G A F+K G N TY
Sbjct: 329 QMHQLLDVMVRNGTQPDHY----IFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTY 384
Query: 236 YFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE 295
++AL R D A S +++I G P+ +I C K +A +
Sbjct: 385 GTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIG 444
Query: 296 KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVH 355
+ + P L++ LC+E + A ++ D + + ++++I C V
Sbjct: 445 RGICPNTIFFNTLLNHLCKEGMVTR-AKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVD 503
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
A LL M+ +G P +N++I+ Y K G + A + + M S+G+ P + Y+ ++
Sbjct: 504 EATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTIL 563
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
G ++ A E+ K +L TY+ +++G C+ D AL++ + + +
Sbjct: 564 HGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFH 623
Query: 476 PNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
+N +I +L LK A+ L + +GL N +T L+
Sbjct: 624 LQNRTFNIMIDAL-LKGGRHDEAKDLFASLLARGLVPNVVTYWLM 667
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 142/327 (43%), Gaps = 8/327 (2%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC-EKMIET 261
+I S+ G AF + G A T+ ++ L K A + +M
Sbjct: 102 VIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPAL 161
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEA-HVVYTL-AREKKMYPPQSVVAF--LISSLCQEDE 317
G P++ ++ C ++++A H+++T+ A + + P VV++ +I+ L +E +
Sbjct: 162 GCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQ 221
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
K A + D+ + ++ ++ C A + KM +G P +N
Sbjct: 222 LDK-AYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYN 280
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+++ K G A ++ M +G KPD Y L+ GYA G + + ++L+ +N
Sbjct: 281 TLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRN 340
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
++ ++ LI Y K D A+ ++M+ G+ PN+ Y ++ +LC +
Sbjct: 341 GTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALC-RVGKVDD 399
Query: 498 AEKLLEDMRLKGLHLNGIT-RALIRAV 523
A + + +GL NG+ R LI +
Sbjct: 400 AMSQFDRLISEGLTPNGVVFRTLIHGL 426
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 95/238 (39%), Gaps = 4/238 (1%)
Query: 181 WDIVKEIGEK--EKGVLTVEIL-NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYF 237
WD +E+ + +G+ I N L+ K G A +F+ + TY
Sbjct: 432 WDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTT 491
Query: 238 TIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKK 297
I+ D A + E M+ G P+ II+ +CK G+ ++A ++ K
Sbjct: 492 LIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKG 551
Query: 298 MYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGA 357
+ P + + ++ L Q + A ++ K I ++ +++ LC+ A
Sbjct: 552 VNPGIVIYSTILHGLFQT-RRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDA 610
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
+ + N FN +I A K G A ++ + +RGL P+V TY +M
Sbjct: 611 LRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMM 668
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
NS +SA ++ +PA+ + + +R + D+ TY+ ++ + G ++ A L
Sbjct: 69 LNSALSAVARE---SPAVALS--LFNRMPRADLCTYSIVIGCCSRAGHLDLAFAALGRVI 123
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKL-LNEMKDVGVQPNVDEYNKLIQSLC 489
+ +T+ L++G C + A+ + L M +G PN YN L++ LC
Sbjct: 124 RTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLC 178
>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 150/349 (42%), Gaps = 39/349 (11%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+ + ++L+ ++G A +F++ G + T I + +A+S+
Sbjct: 55 IFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLG 114
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSV-VAFLISSLCQE 315
+++ G P+ +I+ FC G +A + + L K YP LI+ LC+
Sbjct: 115 TILKMGFQPNMVTFNTLINGFCINGMVSKA-MAFRLDLMAKGYPLDEFSYGSLINGLCKN 173
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR-------------------MKDV-- 354
+T + AL +L + + + +S+VI LC+ + DV
Sbjct: 174 GQT-RDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVA 232
Query: 355 -----HG---------AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
HG A LL+ M+ P + FN ++ A K G + A + +M
Sbjct: 233 YNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMM 292
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
RG KPD+ TY LM G+ + EA E+ N K + Y+ LI GYCK++ D
Sbjct: 293 KRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVD 352
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
A+ L E++ + PN+ YN LI LC K ++L+++M +G
Sbjct: 353 EAMVLFKEIRCKNLVPNLATYNSLIDGLC-KLGRMSCVQELVDEMCDRG 400
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 138/307 (44%), Gaps = 3/307 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K G+ + A ++ K + N TY I+ L + ++ A + + G
Sbjct: 166 LINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRG 225
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
L D +I C G+ +EA + T+ + P L+ +LC+E V+ A
Sbjct: 226 ILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVE-A 284
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+ K I +++++ C +V A+ L ++M+ G P +N +I+
Sbjct: 285 QGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLING 344
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y K + AM + K +R + L P++ TY L+ G G+M E+++E
Sbjct: 345 YCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPD 404
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
VTY+ + +CK + ++ A+ L ++ G+ P+ Y+ ++++ C K + AE+ L
Sbjct: 405 IVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIVENFC-KGEKLKIAEEAL 462
Query: 503 EDMRLKG 509
+ + + G
Sbjct: 463 QHLLIHG 469
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 100/217 (46%), Gaps = 4/217 (1%)
Query: 291 TLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSL 348
+ R + +PP + F L+ ++ + A+ + + +I + +I
Sbjct: 42 SFNRMLRKHPPPPIFVFDKLLGAIVRMGH-YPTAISLFSQLHSKGITPSIATLTILINCY 100
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
C + A +LL ++ G P FN++I+ + G ++ AM + ++G D
Sbjct: 101 CHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDE 160
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNE 468
++Y L++G GQ +A ++L + +++ R + +TY T+I G CK AL+L +
Sbjct: 161 FSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSL 220
Query: 469 MKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
+ G+ +V YN LI C WR A +LL M
Sbjct: 221 VTSRGILVDVVAYNSLIHG-CCSVGQWREATRLLTMM 256
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 132/307 (42%), Gaps = 7/307 (2%)
Query: 169 CSSVGK-KEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYG 227
C SVG+ +E L ++ G T IL + + ++ + + F V K G+
Sbjct: 240 CCSVGQWREATRLLTMMVR-GNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKP 298
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH 287
+ TY +E A + +M++ G PD +I+ +CK EA
Sbjct: 299 DIV---TYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAM 355
Query: 288 VVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRS 347
V++ R K + P + LI LC+ + +++D+ + I ++ + +
Sbjct: 356 VLFKEIRCKNLVPNLATYNSLIDGLCKLGR-MSCVQELVDEMCDRGQSPDIVTYNIFLDA 414
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
C+ K A +L +++ +G P +++ ++ + K + A E L+ + G P+
Sbjct: 415 FCKSKPYEKAISLFRQIV-QGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPN 473
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
V TYT +++ +EA +L++ N VT+ T+I + E D A KL
Sbjct: 474 VRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRL 533
Query: 468 EMKDVGV 474
EM + G+
Sbjct: 534 EMIERGL 540
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 37/168 (22%)
Query: 359 TLLS--KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
TLLS +M+ + PPP VF+ ++ A + G A+ + + S+G+ P + T T L++
Sbjct: 39 TLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILIN 98
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC--------------------KL 456
Y + + A +L K + + VT++TLI G+C L
Sbjct: 99 CYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPL 158
Query: 457 EEFD--------C-------ALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+EF C AL+LL +M++ V+PN+ Y+ +I LC
Sbjct: 159 DEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLC 206
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 105/248 (42%), Gaps = 10/248 (4%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+AL++ C S E L++ + + G E VL N LI + K+ A +F
Sbjct: 304 NALMEGFCLSNNVSEARELFNRMVKRG-LEPDVLNY---NVLINGYCKIDMVDEAMVLFK 359
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ V N TY I+ L + + ++M + G PD + FCK
Sbjct: 360 EIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSK 419
Query: 282 KAKEAHVVYTLARE--KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
++A +L R+ + ++P + ++ + C+ E +K+A + L ++
Sbjct: 420 PYEKA---ISLFRQIVQGIWPDFYMYDVIVENFCK-GEKLKIAEEALQHLLIHGCCPNVR 475
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
++ +I +LC+ A TLLSKM PP F ++I A + + A ++ M
Sbjct: 476 TYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEM 535
Query: 400 RSRGLKPD 407
RGL D
Sbjct: 536 IERGLVND 543
>gi|255562047|ref|XP_002522032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538836|gb|EEF40436.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 451
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 167/402 (41%), Gaps = 47/402 (11%)
Query: 116 DGYLESSLDSFELDLHEDFVLKVLETPLVLGENLVCFFKWV------TSGVVDALLKAIC 169
D Y E +L+ + + V +VL + FF W TS + L+K +
Sbjct: 54 DFYPERTLNKLNAPVTSELVFRVLRACSRSPTESLRFFNWSRAYYTPTSIEYEELIKILA 113
Query: 170 SSVGKKEVYALWDIVKEIGEKEKGV-LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGC 228
S K ++W ++ ++ ++ ++ E + +I + + G A EVFN+ C
Sbjct: 114 KS---KRYSSMWKLITQMKDQNPQFSISSETVRSIIEEYGRSGLIDQAVEVFNQCNSLNC 170
Query: 229 VANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHV 288
N + Y + AL K+F A+++ ++I G P+ +++ +C GK KEA +
Sbjct: 171 EQNVDIYNSLLFALCEVKLFHGAYALVRRLIRKGLAPNKTTYSVLVNGWCSNGKFKEAQL 230
Query: 289 VYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSL 348
+K PP ++ +I L
Sbjct: 231 FLEEMSKKGFNPP------------------------------------VRGRDLLIEGL 254
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
AK ++ KM EG P FN +I A +G++ ++M +R G PD+
Sbjct: 255 LNAGYFESAKEMVFKMSKEGFVPDVNTFNCLIEAICNSGEVDFCVDMYYSLRKLGFCPDI 314
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNE 468
+Y L+ + G+++EA ++LN + ++ + P Y +I+G C+ +FD A E
Sbjct: 315 NSYKILIPAVSKVGKIDEAFKLLNNSIEDGHKPFPGLYAPIIKGMCRRGQFDDAFCFFGE 374
Query: 469 MKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
MK G PN Y LI ++C + + A L +M GL
Sbjct: 375 MKVKGHPPNRPVYTMLI-TMCGRGGKYVEAANYLVEMTEMGL 415
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 146/322 (45%), Gaps = 3/322 (0%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNK-FGDYGCVANQETYYFTIEALSRRKIFDWAWSV 254
V + N LI + G+ A V ++ GC + TY I L ++ A +
Sbjct: 352 NVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAREL 411
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
+M G P+ +I FCK G+ +EA V K + LIS+LC+
Sbjct: 412 MNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCK 471
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
DE V+ AL+M D S + K I F+S+I LC++ A L M+ EG
Sbjct: 472 -DEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTI 530
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
+N++I A+ + G M A++++ M RG D TY GL+ G +E+ + +
Sbjct: 531 TYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDM 590
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
+ ++ + LI G C+ AL+ L +M G+ P++ YN LI LC K
Sbjct: 591 MSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLC-KTGR 649
Query: 495 WRTAEKLLEDMRLKGLHLNGIT 516
+ A L + ++++G+ + IT
Sbjct: 650 AQEALNLFDKLQVEGICPDAIT 671
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 133/301 (44%), Gaps = 22/301 (7%)
Query: 186 EIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRR 245
+I E V+T IL I F K G+ + A V ++ G N Y I AL +
Sbjct: 416 QIKGCEPNVITYTIL---IDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKD 472
Query: 246 KIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVV 305
+ A ++ M G PD +I CK K +EA +Y + +
Sbjct: 473 EKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITY 532
Query: 306 AFLISSLCQE---DETVKLALDML------DDFSGEARKYAIKPFSSVIRSLCRMKDVHG 356
LI + + E +KL DML DD + ++ +I++LCR ++
Sbjct: 533 NTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDIT----------YNGLIKALCRAGNIEK 582
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
L M+S+G P N N +I+ + G++ A+E L+ M RGL PD+ TY L++
Sbjct: 583 GLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLIN 642
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
G G+ +EA + ++ + +TY+TLI +CK FD A LL+ D G P
Sbjct: 643 GLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIP 702
Query: 477 N 477
N
Sbjct: 703 N 703
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 139/309 (44%), Gaps = 13/309 (4%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI K G +A E+ N+ GC N TY I+ + + A +V ++M
Sbjct: 393 NTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSG 452
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G ++ +IS CK K ++A ++ K P LI LC+ ++ +
Sbjct: 453 KGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNK-FE 511
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
AL + D E ++++I + R + A L++ M+ G P + +N +I
Sbjct: 512 EALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLI 571
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
A +AG++ + + + M S+GL P+ + L++G G ++ A E L + H
Sbjct: 572 KALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMI--HRG 629
Query: 441 LSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
L+P VTY++LI G CK AL L ++++ G+ P+ YN LI W
Sbjct: 630 LTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLIS--------WHCK 681
Query: 499 EKLLEDMRL 507
E + +D L
Sbjct: 682 EGMFDDAHL 690
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 166/385 (43%), Gaps = 52/385 (13%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA 216
T GVV +KA+C EV + ++K++ + V + LI K+G+
Sbjct: 219 TFGVV---MKALCLV---NEVDSACALLKDM-TRHGCVPNAIVYQTLIHALXKVGRVNEV 271
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
++ + GC+ + T+ I L + A + ++M+ G P+S G ++
Sbjct: 272 LKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHG 331
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
C+ GK EA ++ K+ P V+
Sbjct: 332 LCRMGKVDEARMLL-----NKVPNPNVVL------------------------------- 355
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSK-MISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
F+++I + AK ++ + M+S G P +N++I K G + A E+
Sbjct: 356 ----FNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAREL 411
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
+ M+ +G +P+V TYT L+ + G++EEA +L+E L+ V Y+ LI CK
Sbjct: 412 MNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCK 471
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
E+ AL + +M G +P++ +N LI LC K + A L +DM L+G+ N I
Sbjct: 472 DEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLC-KVNKFEEALGLYQDMLLEGVIANTI 530
Query: 516 T-RALIRAVKELEEDAIENGEALVE 539
T LI A L A++ LV
Sbjct: 531 TYNTLIHAF--LRRGAMQEALKLVN 553
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 105/254 (41%), Gaps = 4/254 (1%)
Query: 205 ALFSKLGKGKAAFEVFNKFGDY---GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET 261
L S L K + + N FGD GC + T+ I L + F+ A + + M+
Sbjct: 464 CLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLE 523
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
G + ++ +I F + G +EA + + LI +LC+ K
Sbjct: 524 GVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEK- 582
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
L + +D + + +I LCR ++ A L MI G P +NS+I+
Sbjct: 583 GLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLIN 642
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
K G A+ + ++ G+ PD TY L+S + G ++A +L+ +
Sbjct: 643 GLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIP 702
Query: 442 SPVTYHTLIRGYCK 455
+ VT++ L+ + K
Sbjct: 703 NEVTWYILVSNFIK 716
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M S+G+ P VYT+ +M +++ AC +L + ++ + + Y TLI K+
Sbjct: 208 MLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGR 267
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRA 518
+ LKLL EM +G P+V+ +N I LC K L A KL++ M L+G N T
Sbjct: 268 VNEVLKLLEEMLLMGCIPDVNTFNDAIHGLC-KMLRIHEAAKLVDRMLLRGFTPNSFTYG 326
Query: 519 LI 520
++
Sbjct: 327 VL 328
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 78/188 (41%), Gaps = 1/188 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI F + G + A ++ N GC + TY I+AL R + ++ E M+
Sbjct: 533 NTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMS 592
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P++ +I+ C+ G + A + + P LI+ LC+ +
Sbjct: 593 KGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQE 652
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
AL++ D E ++++I C+ A LLS+ + G P + ++
Sbjct: 653 -ALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILV 711
Query: 381 SAYSKAGD 388
S + K GD
Sbjct: 712 SNFIKEGD 719
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 105/283 (37%), Gaps = 75/283 (26%)
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ +L LDM +S E + ++ V+ L + +M+S+G P F
Sbjct: 164 QATRLLLDMRGVYSCEP---TFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTF 220
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA--------- 427
V+ A ++ A +LK M G P+ Y L+ G++ E
Sbjct: 221 GVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLL 280
Query: 428 -----------------CEIL--NEAKKNHSRL-------SPVTYHTLIRGYCKLEEFDC 461
C++L +EA K R+ + TY L+ G C++ + D
Sbjct: 281 MGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDE 340
Query: 462 ALKLLNE--------------------------------MKDVGVQPNVDEYNKLIQSLC 489
A LLN+ M VG P++ YN LI LC
Sbjct: 341 ARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLC 400
Query: 490 LKALDWRTAEKLLEDMRLKGLHLNGITRALI--RAVKE--LEE 528
K +A +L+ +M++KG N IT ++ R KE LEE
Sbjct: 401 KKGY-LVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEE 442
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 65/156 (41%), Gaps = 4/156 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+KA+C + ++ AL++ + G + N LI + G + A E
Sbjct: 568 NGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISC----NILINGLCRTGNIQHALEFLR 623
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G + TY I L + A ++ +K+ G PD+ +ISW CK G
Sbjct: 624 DMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEG 683
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
+AH++ + + P + L+S+ +E +
Sbjct: 684 MFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 719
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 135/308 (43%), Gaps = 4/308 (1%)
Query: 183 IVKEIGEKEKGVLTVEI-LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEA 241
+ +IGE+ G+L + N LI +G+ + ++ K + T+ I+A
Sbjct: 217 LCSQIGER--GILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDA 274
Query: 242 LSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPP 301
L + A V M + G PD ++ +C EA ++ ++ + P
Sbjct: 275 LCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPD 334
Query: 302 QSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLL 361
LI C+ + V A+ + + + I ++S+I LC + K LL
Sbjct: 335 VLNYNVLIDGYCKT-KMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLL 393
Query: 362 SKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG 421
+M PP +N +I A K G + A+ +L +M +G+KP++ TY +M GY
Sbjct: 394 DEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLR 453
Query: 422 GQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEY 481
+ A +I N K+ + Y+ LI GYCK E D A+ L EM+ + P++ Y
Sbjct: 454 NNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASY 513
Query: 482 NKLIQSLC 489
N LI LC
Sbjct: 514 NSLIDGLC 521
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 138/308 (44%), Gaps = 2/308 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI SK G+ KAA + + N Y I+ L + A +C ++ E G
Sbjct: 166 LINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERG 225
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
L D+ +I C G+ +E + T + + P LI +LC+E ++ A
Sbjct: 226 ILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILE-A 284
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+L S K I +++++ C ++VH A+ L ++M+ G P +N +I
Sbjct: 285 QGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDG 344
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y K + AM + K + ++ L P + +Y L+ G N G++ ++L+E +
Sbjct: 345 YCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPD 404
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
VTY+ LI CK AL +L M GV+PN+ YN ++ CL+ + A+ +
Sbjct: 405 VVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRN-NVNVAKDIF 463
Query: 503 EDMRLKGL 510
M GL
Sbjct: 464 NRMVKSGL 471
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 172/379 (45%), Gaps = 14/379 (3%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ A+C E + ++ + GEK + N L+ + A E+FN
Sbjct: 269 NILIDALCKEGRILEAQGVLAMMSKRGEKPD----IVTYNALMEGYCSRENVHEARELFN 324
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ G + Y I+ + K+ D A + +++ +P +I C G
Sbjct: 325 RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
+ +HV L P VV + LI +LC+E ++ AL +L + K I
Sbjct: 385 RI--SHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILE-ALGVLVMMMKKGVKPNIV 441
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
+++++ C +V+ AK + ++M+ G P +N +I+ Y K + A+ + K M
Sbjct: 442 TYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEM 501
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
R + L PD+ +Y L+ G N G++ E+L+E + +TY+ L+ +CK + F
Sbjct: 502 RHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPF 561
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRAL 519
D A+ L ++ + G+ P+ + ++ +LC K + AE L+ + + G N T +
Sbjct: 562 DKAISLFRQIVE-GIWPDFYTNHAIVDNLC-KGEKLKMAEDALKHLLMHGCSPNVQTYTI 619
Query: 520 IRAVKELEEDAIENGEALV 538
+ + L +D GEA++
Sbjct: 620 L--INALCKDG-SFGEAML 635
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 144/325 (44%), Gaps = 12/325 (3%)
Query: 169 CSSVGK-KEVYALWD-IVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDY 226
C SVG+ +EV L +V+E + + N LI K G+ A V
Sbjct: 240 CCSVGRWQEVTQLLTKMVRENVDPDD-----YTFNILIDALCKEGRILEAQGVLAMMSKR 294
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G + TY +E R+ A + +M++ G PD +I +CK EA
Sbjct: 295 GEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEA 354
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
V++ K + P + LI LC + +LD+ G A+ + ++ +I
Sbjct: 355 MVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVK-KLLDEMHGSAQPPDVVTYNILID 413
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
+LC+ + A +L M+ +G P +N+++ Y ++ A ++ M GL+P
Sbjct: 414 ALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEP 473
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALK 464
D+ Y L++GY ++EA + E + H L P +Y++LI G C L +
Sbjct: 474 DILNYNVLINGYCKTEMVDEAIVLFKEMR--HKNLIPDIASYNSLIDGLCNLGRIPHVQE 531
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLC 489
LL+EM D G P+V YN L+ + C
Sbjct: 532 LLDEMCDSGQSPDVITYNILLDAFC 556
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 46/201 (22%)
Query: 335 KYAIKPFSSVIRSL-----------CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAY 383
+YAI FS R CR ++V A T ++M+ PPP +VF+ ++ A
Sbjct: 6 RYAIPKFSISSRFFGHFQPQNPHKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAI 65
Query: 384 SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
+ G A+ + ++S+G+ P + T+T L++ Y + A +L K+ + +
Sbjct: 66 VRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNL 125
Query: 444 VTYHTLIRGYC-----------------------------------KLEEFDCALKLLNE 468
VT++T+I G+C K + AL LL E
Sbjct: 126 VTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQE 185
Query: 469 MKDVGVQPNVDEYNKLIQSLC 489
M+ VQPN+ Y+ LI LC
Sbjct: 186 MEKSSVQPNLVMYSALIDGLC 206
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 107/246 (43%), Gaps = 1/246 (0%)
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS 303
R + D A + +M+ P + K++ + G A ++T + K + P +
Sbjct: 32 RFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIA 91
Query: 304 VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSK 363
LI+ + T A +L + + F+++I C + A
Sbjct: 92 TFTILINCYFHQSHTA-FAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
++++G + ++I+ SK G + A+ +L+ M ++P++ Y+ L+ G G
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
+ +A + ++ + L VTY++LI G C + + +LL +M V P+ +N
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270
Query: 484 LIQSLC 489
LI +LC
Sbjct: 271 LIDALC 276
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 136/349 (38%), Gaps = 42/349 (12%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
++L+ +C+S V L D + + V N LI K G+ A V
Sbjct: 374 NSLIDGLCNSGRISHVKKLLDEMHGSAQPPD----VVTYNILIDALCKEGRILEALGVLV 429
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G N TY ++ R + A + +M+++G PD +I+ +CK
Sbjct: 430 MMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTE 489
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
EA V++ R K + P I +
Sbjct: 490 MVDEAIVLFKEMRHKNLIP------------------------------------DIASY 513
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+S+I LC + + + LL +M G P +N ++ A+ K A+ + + +
Sbjct: 514 NSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI-V 572
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+ PD YT ++ G +++ A + L + + TY LI CK F
Sbjct: 573 EGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGE 632
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
A+ LL++M+D P+ + +I L L+ + AEKL E+M +GL
Sbjct: 633 AMLLLSKMEDNDRPPDAITFEIIIGVL-LQRNETDKAEKLREEMIARGL 680
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 95/206 (46%), Gaps = 2/206 (0%)
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
PP SV L+ ++ + A+ + + +I F+ +I A +
Sbjct: 53 PPTSVFDKLLGAIVRMGH-YPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFS 111
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
LL+ ++ G P FN++I+ + G + A++ + + ++G D +TY L++G +
Sbjct: 112 LLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLS 171
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
GQ++ A +L E +K+ + + V Y LI G CK AL L +++ + G+ +
Sbjct: 172 KNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAV 231
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDM 505
YN LI C W+ +LL M
Sbjct: 232 TYNSLIDG-CCSVGRWQEVTQLLTKM 256
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/312 (18%), Positives = 121/312 (38%), Gaps = 37/312 (11%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+ ++L+ ++G A +F + G + T+ I + +A+S+ +
Sbjct: 57 VFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATI 116
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+++G P+ II+ FC G
Sbjct: 117 LKSGYQPNLVTFNTIINGFCING------------------------------------M 140
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+ ALD + + + + ++I L + + A LL +M P ++++
Sbjct: 141 IFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSA 200
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I K G ++ A+ + + RG+ D TY L+ G + G+ +E ++L + + +
Sbjct: 201 LIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVREN 260
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
T++ LI CK A +L M G +P++ YN L++ C + + A
Sbjct: 261 VDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRE-NVHEA 319
Query: 499 EKLLEDMRLKGL 510
+L M +GL
Sbjct: 320 RELFNRMVKRGL 331
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 151/329 (45%), Gaps = 4/329 (1%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI + +LG AF +F++ TY ++ L R+ + A + +MI
Sbjct: 378 NTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMIN 437
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD +++ CK G A + + + A I + +T +
Sbjct: 438 EGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSR 497
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A + ++ + + ++ V+ LC++ ++ A LL KM+S+G P + S+I
Sbjct: 498 -AFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSII 556
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
A+ + G + E+ M S+GL P V TYT L+ G+A G++E A +E ++
Sbjct: 557 HAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGIL 616
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+ +TY++LI G CK+ D A EM + G+ PN Y LI C +W+ A
Sbjct: 617 PNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMG-NWQEALS 675
Query: 501 LLEDMRLKGLHLNGITRALIRAVKELEED 529
L + M +G+ + T + + +K+L +D
Sbjct: 676 LYKQMLDRGVQPDSCTHSAL--LKQLGKD 702
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 153/333 (45%), Gaps = 3/333 (0%)
Query: 195 LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSV 254
++V+IL+ LI ++SK + VF+K + + + L + + A V
Sbjct: 162 VSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEV 221
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
M E G P ++ +CKGGK ++ + + + + P LI+ L +
Sbjct: 222 YRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSK 281
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
+ E + A ++ + K + ++ +I + A +L +M+ +G P A
Sbjct: 282 KGE-FEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVA 340
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
+NS I K G M+ AM+ L M + L PDV +Y L+ GY G + +A + +E
Sbjct: 341 TYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDEL 400
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
+ + + VTY+TL+ G C+ E + A +L EM + G+ P++ Y L+ C K
Sbjct: 401 RSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSC-KMGS 459
Query: 495 WRTAEKLLEDMRLKGLHLNGITRALIRAVKELE 527
A++ ++M +GL L+ A R V EL+
Sbjct: 460 LSMAQEFFDEMLHEGLELDSYAYA-TRIVGELK 491
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 146/343 (42%), Gaps = 5/343 (1%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
T+ N L+ + K GK + ++ ++ GC N TY I LS++ F+ A +
Sbjct: 233 TIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLI 292
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+M++TG + +I + G EA + K P + I LC+
Sbjct: 293 GEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKL 352
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
A+ L D + ++++I CR+ ++ A L ++ S P
Sbjct: 353 GRMSD-AMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVT 411
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N+++ + G++ A ++ M + G+ PD+ TYT L++G G + A E +E
Sbjct: 412 YNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEML 471
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
L Y T I G KL + A L EM G P++ YN ++ LC K +
Sbjct: 472 HEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLC-KLGNL 530
Query: 496 RTAEKLLEDMRLKGLHLNGIT-RALIRAVKELEEDAIENGEAL 537
A +LL+ M G+ + +T ++I A LE + G +
Sbjct: 531 EEASELLQKMVSDGVIPDYVTYTSIIHA--HLENGRLRKGREI 571
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 151/322 (46%), Gaps = 10/322 (3%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+ N LI + K+G A ++ + G N T I+ + A +V E+M
Sbjct: 363 VYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEM 422
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEA-HVVYTLAREKKMYPPQSVVAFLISSLCQ--- 314
I G + +I+W C + A H + + + + P ++ L+S LC+
Sbjct: 423 IGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLL-RNLRPNDGLLTTLVSGLCKAGK 481
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
+ E V+L +L G+ I +++I LC+ ++ LL M+ G
Sbjct: 482 QGEAVELWCRLL----GKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRI 537
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
+N++IS K G + E+ + M +G++PD+YT+ L+ G N +++EA + +E
Sbjct: 538 TYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHEC 597
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
KKN + TY +I GYCK + + LLNE+ ++ N YN LI++ C+ +
Sbjct: 598 KKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCING-N 656
Query: 495 WRTAEKLLEDMRLKGLHLNGIT 516
A +L +DM+ +G+ L+ T
Sbjct: 657 MNAAFRLRDDMKSRGVLLSCAT 678
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 149/332 (44%), Gaps = 7/332 (2%)
Query: 159 GVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKG-VLTVEILNELIALFSKLGKGKAAF 217
G++ L+ +C + + E LW + +G KG V + N LI K G +
Sbjct: 467 GLLTTLVSGLCKAGKQGEAVELW--CRLLG---KGFVPNIVTSNALIHGLCKAGNMQETL 521
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
++ + G V ++ TY I + + + E+M++ G PD ++
Sbjct: 522 KLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGL 581
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
C K EA ++ ++ P +I C+ ++ V+ ++L++ + +
Sbjct: 582 CNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANK-VEEGENLLNELVSKKLELN 640
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
++S+IR+ C +++ A L M S G A ++S++ G + A +L
Sbjct: 641 SVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLD 700
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
MR GL P+V YT ++ GY+ GQM + +L E ++ + TY +I G+CKL
Sbjct: 701 EMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLG 760
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ A KLLNEM + G+ P+ YN LC
Sbjct: 761 KTKEAAKLLNEMTEKGILPDAVTYNAFTNGLC 792
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 146/329 (44%), Gaps = 15/329 (4%)
Query: 162 DALLKAICSSVGKKEVYALW-DIVKEIGEKEKGVLTVEI-LNELIALFSKLGKGKAAFEV 219
+AL+ +C + +E L D++ E+G++ I N LI+ K GK K FE+
Sbjct: 505 NALIHGLCKAGNMQETLKLLRDML------ERGLVFDRITYNTLISGCCKEGKVKEGFEL 558
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWA---WSVCEKMIETGSLPDSEKVGKIISW 276
+ G + T+ + L D A W C+K G +P+ G +I
Sbjct: 559 KEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKK---NGYVPNVYTYGVMIDG 615
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
+CK K +E + KK+ V LI + C + + A + DD
Sbjct: 616 YCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCI-NGNMNAAFRLRDDMKSRGVLL 674
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ +SS++ LC + V AK LL +M EG P + ++I YSK G M +L
Sbjct: 675 SCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVL 734
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
+ M S + P+ +TYT ++ G+ G+ +EA ++LNE + VTY+ G CK
Sbjct: 735 QEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKE 794
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
+ + A K+ +EM V + Y LI
Sbjct: 795 GKVEEAFKVCDEMSSGAVCLDEITYTTLI 823
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 112/225 (49%), Gaps = 2/225 (0%)
Query: 289 VYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSL 348
V++L +K ++P FL+SSL + +E +K + ++ D + FS++I +
Sbjct: 208 VFSLLAKKGLFPSLKTCTFLLSSLVKANE-LKKSYEVYDFICLGGIIPDVHLFSTMINAF 266
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
C+ A L SKM G P +N++I K+G + A + M + P +
Sbjct: 267 CKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSL 326
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNE 468
TY+ ++G +++EA +L E + + V Y+TLI GYCK+ ALK+ ++
Sbjct: 327 ITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDD 386
Query: 469 MKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
M G+ PN N LIQ C K+ AE +LE+M +GL +N
Sbjct: 387 MLSKGISPNSVTLNSLIQGFC-KSDQIGQAENVLEEMIGRGLPIN 430
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 177/417 (42%), Gaps = 50/417 (11%)
Query: 143 LVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNE 202
L++G +L+ + + ++D + A + + + + I+ + + V+ V+I +
Sbjct: 129 LLVGNDLLSPARLLLIRLIDGKVPAFYARNFESRHFEIAQIMADFNLVFEPVIGVKIADL 188
Query: 203 LIALFS----KLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
L+ ++S LG G AA +VF+ G + +T F + +L + ++ V + +
Sbjct: 189 LVHVYSTQFKHLGFGFAA-DVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFI 247
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
G +PD +I+ FCKG + +A +++ + + P +I LC+
Sbjct: 248 CLGGIIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGR- 306
Query: 319 VKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
LD F + K + P +S I L +++ + A +L +M G P
Sbjct: 307 ----LDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEV 362
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
V+N++I Y K G+++ A+++ M S+G+ P+ T L+ G+ Q+ +A +L E
Sbjct: 363 VYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEM 422
Query: 435 -----KKNHSRLSPVT------------------------------YHTLIRGYCKLEEF 459
N S V TL+ G CK +
Sbjct: 423 IGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQ 482
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A++L + G PN+ N LI LC KA + + KLL DM +GL + IT
Sbjct: 483 GEAVELWCRLLGKGFVPNIVTSNALIHGLC-KAGNMQETLKLLRDMLERGLVFDRIT 538
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 126/284 (44%), Gaps = 17/284 (5%)
Query: 248 FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF 307
F +A V + + G P + ++S K + K+++ VY + P + +
Sbjct: 202 FGFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFST 261
Query: 308 LISSLC---QEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTL 360
+I++ C +ED+ + L M K + P ++++I LC+ + A
Sbjct: 262 MINAFCKGHREDDAIGLFSKM--------EKLGVAPNVVTYNNIIHGLCKSGRLDEAYRF 313
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
KM+ E P ++ I+ K + A +LK M G P+ Y L+ GY
Sbjct: 314 KEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCK 373
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
G + EA +I ++ + VT ++LI+G+CK ++ A +L EM G+ N
Sbjct: 374 MGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGS 433
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN-GITRALIRAV 523
++ +I LCLK + TA + +M L+ L N G+ L+ +
Sbjct: 434 FSMVINWLCLK-FRFVTALHFIREMLLRNLRPNDGLLTTLVSGL 476
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 134/287 (46%), Gaps = 16/287 (5%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL-PDSEK 269
G+ A + ++ + G NQ TY ++ + + A ++ KM E + P+
Sbjct: 192 GRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVI 251
Query: 270 VGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDML 326
II K G+ +AH +YT +EK ++P +I C E +L +ML
Sbjct: 252 YSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEML 311
Query: 327 DDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+ RK I P +S++I + + + A+ L +M+ G P +NS+I
Sbjct: 312 E------RK--INPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDG 363
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ K + A M +M ++G PDV+T+ L+ GY ++++ E+L+E +
Sbjct: 364 FCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVAD 423
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
TY+TLI G+C + + + AL L +M GV P++ N L+ LC
Sbjct: 424 TTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLC 470
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 133/324 (41%), Gaps = 25/324 (7%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I F K + AA +F GC + T+ I+ K D + +M E
Sbjct: 358 NSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTE 417
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
TG + D+ +I FC G A + + P L+ LC ++ +K
Sbjct: 418 TGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLC-DNGKLK 476
Query: 321 LALDMLDDFSGEARKY-AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP---------- 369
AL+M A +PF+ V DV L+S +I+EG
Sbjct: 477 DALEMFKAMQKSKMDLDASRPFNGV------EPDVQTYNILISGLINEGKFLEAEELYKE 530
Query: 370 ------PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
P ++S+I+ K + A +M M S+ PDV T+ L+SGY G+
Sbjct: 531 MPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGR 590
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
+++ E+ E + +TY TLI G+ K+ + AL + EM GV P+
Sbjct: 591 VDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRS 650
Query: 484 LIQSLCLKALDWRTAEKLLEDMRL 507
++ L K + + A +LED+++
Sbjct: 651 MLTVLWSKE-ELKRAVAMLEDLQM 673
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 89/179 (49%), Gaps = 16/179 (8%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+ F+ +I+ C + A + K+ G P F++++ ++ A+++
Sbjct: 112 VYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFH 171
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M +P+V T+T LM+G G++ EA +L+ ++ + + +TY T++ G CK+
Sbjct: 172 QM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIG 227
Query: 458 EFDCALKLLNEMKDVG-VQPNVDEYNKLIQSLCLKALDWR-----TAEKLLEDMRLKGL 510
+ AL LL +M+++ ++PNV Y+ +I L W+ A L +M+ KG+
Sbjct: 228 DTVSALNLLRKMEEMSHIKPNVVIYSAIIDGL------WKDGRHSDAHNLYTEMQEKGI 280
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 5/184 (2%)
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A+D+ D ++ F+ ++ + RM+ +L KM + P FN +I
Sbjct: 61 AIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIK 120
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
+ + A+ + G +PDV T++ L+ G ++ EA ++ ++ R
Sbjct: 121 CFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM----CRP 176
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+ VT+ TL+ G C+ A+ LL+ M + G+QPN Y ++ +C K D +A L
Sbjct: 177 NVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMC-KIGDTVSALNL 235
Query: 502 LEDM 505
L M
Sbjct: 236 LRKM 239
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 73/172 (42%), Gaps = 9/172 (5%)
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+K + A L S M+ P P FN ++ + + + + M + + DVY+
Sbjct: 55 IKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYS 114
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
+ L+ + + ++ A + K + VT+ TL+ G C + AL L ++M
Sbjct: 115 FNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM- 173
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAE--KLLEDMRLKGLHLNGITRALI 520
+PNV + L+ LC + R E LL+ M GL N IT I
Sbjct: 174 ---CRPNVVTFTTLMNGLCREG---RVVEAVALLDRMVEDGLQPNQITYGTI 219
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 132/331 (39%), Gaps = 36/331 (10%)
Query: 194 VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWS 253
V V N +I + K K A E N G Y C + TY ++AL ++ A
Sbjct: 205 VPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARD 264
Query: 254 VCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC 313
+ M G LP+ ++ +CK G KEA V L + + P LI+ LC
Sbjct: 265 LLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLC 324
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
E ++ A + D+ + ++++I + A LL +M +G P
Sbjct: 325 NEGR-IEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNA 383
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM--------- 424
N ++ Y K G M A + M G PD TY L++GY G M
Sbjct: 384 VTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDE 443
Query: 425 --------------------------EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
EEA ++L+ A+K + V+Y TLI GY K
Sbjct: 444 MGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGN 503
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
D ALKL +EMK+ + P+ YN +I LC
Sbjct: 504 VDRALKLWDEMKEKEIIPSTVTYNCIIGGLC 534
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 162/382 (42%), Gaps = 39/382 (10%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ +C+ +E + L D ++ + K + V N LI + K AF++
Sbjct: 317 NMLINGLCNEGRIEEAFKLRDEMENL----KLLPDVVSYNTLINGCLEWSKISEAFKLLE 372
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ + G N T+ ++ + D A + KM E+G PD +I+ +CK G
Sbjct: 373 EMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAG 432
Query: 282 KAKEAH--------------------VVYTLAREKKMYPPQSVVA------FLISSLCQ- 314
EA ++ TL REKK+ +++ + I +
Sbjct: 433 NMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYG 492
Query: 315 -------EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
+D V AL + D+ + + ++ +I LC+ A + L++++
Sbjct: 493 TLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLES 552
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P +N+++ Y + GD+ A + M KPDV+T L+ G G +E+A
Sbjct: 553 GLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKA 612
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
++ N + VTY+TLI CK D A LL+EM++ + P+ YN +I +
Sbjct: 613 LKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITA 672
Query: 488 LCLKALDWRTAEKLLEDMRLKG 509
L + R AE+ + M KG
Sbjct: 673 LT-DSGRIREAEEFMSKMLEKG 693
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 121/262 (46%), Gaps = 11/262 (4%)
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ--EDETVKLA 322
P + I + + G+ A ++ + ++ P L++SL + +V +
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192
Query: 323 LDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+ +D A K I P F+ VI C A L+ M P N +N+
Sbjct: 193 REAFND----AIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNT 248
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
++ A K G + A ++L M+SRGL P+ TY L+ GY G ++EA ++ +N+
Sbjct: 249 ILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNN 308
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
TY+ LI G C + A KL +EM+++ + P+V YN LI CL+ A
Sbjct: 309 LLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLING-CLEWSKISEA 367
Query: 499 EKLLEDMRLKGLHLNGITRALI 520
KLLE+M KG+ N +T ++
Sbjct: 368 FKLLEEMSEKGVKPNAVTHNIM 389
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 110/295 (37%), Gaps = 44/295 (14%)
Query: 146 GENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIA 205
G +V +FK G VD LK LWD E+ EKE TV N +I
Sbjct: 492 GTLIVGYFK---DGNVDRALK-------------LWD---EMKEKEIIPSTV-TYNCIIG 531
Query: 206 LFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLP 265
+ GK + A N+ + G + ++ TY + R + A+ KM+E P
Sbjct: 532 GLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKP 591
Query: 266 DSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDM 325
D ++ C G ++A ++ K LI+SLC+E + A ++
Sbjct: 592 DVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGR-LDDAFNL 650
Query: 326 LDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV---------- 375
L + + ++++I +L + A+ +SKM+ +G P +
Sbjct: 651 LSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVT 710
Query: 376 -------------FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
++ I G AM + + +G+ D TY LM G
Sbjct: 711 SETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDG 765
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 152/330 (46%), Gaps = 10/330 (3%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ LL+A C G ++ L D ++ G + V N +I + G A E+ N
Sbjct: 202 NILLQAACKGRGYRQALELIDFMRAEGCEPNNV----TYNVIIDAMCREGDVDQARELLN 257
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
GC N Y ++ + + A + ++M+ P+ + II+ C+ G
Sbjct: 258 SLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKG 317
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
++ V L + K +VV + +IS +C E V AL++L + K I
Sbjct: 318 LLQK--VTLYLEKMSKHGCTANVVTYNAVISGMC-EQGNVDSALELLSNMQSFGCKPDIV 374
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
+++V++ LC A+ L+ KM P N+ FN++IS + + G + A E+ K M
Sbjct: 375 TYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQM 434
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
+G P+ TY+ ++ G G+ME+A E+LNE N + Y L K ++
Sbjct: 435 PEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMA-NKGFNTDKMYRVLTESLNKEDKI 493
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ ++++++++D G+ P YN ++ LC
Sbjct: 494 EEVVQVVHKLQDSGISPQTVLYNTVLLGLC 523
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 146/332 (43%), Gaps = 4/332 (1%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI + G+ A V + GC + TY ++A + + + A + + M
Sbjct: 167 NPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRA 226
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P++ II C+ G +A + + P ++ C + V
Sbjct: 227 EGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVD 286
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A ++LD+ E + +I +LCR + L KM G +N+VI
Sbjct: 287 -ADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVI 345
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
S + G++ A+E+L M+S G KPD+ TY ++ G + + E+A E++ + +N
Sbjct: 346 SGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRL 405
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
T++T+I +C+ A ++ +M + G PN Y+ +I L KA A +
Sbjct: 406 PDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGL-TKAGKMEQALE 464
Query: 501 LLEDMRLKGLHLNGITRALIRAVKELEEDAIE 532
LL +M KG + + + R L ++ +ED IE
Sbjct: 465 LLNEMANKGFNTDKMYRVLTESLN--KEDKIE 494
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 132/309 (42%), Gaps = 5/309 (1%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V + N L+ + G+ A V G A TY ++ R + + A V
Sbjct: 96 VPLANRLVRDLCRRGRPADAARVVEACGPE---ATAATYGALVDGYCRAGLLEDARRVVG 152
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
M + +I C+ G+ +A VV + P L+ + C+
Sbjct: 153 GMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACK-G 211
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ AL+++D E + ++ +I ++CR DV A+ LL+ + S G P +
Sbjct: 212 RGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNY 271
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N+V+ + A E+L M P+ T +++ G +++ L + K
Sbjct: 272 NTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSK 331
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ + VTY+ +I G C+ D AL+LL+ M+ G +P++ YN +++ LC A W
Sbjct: 332 HGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLC-SADRWE 390
Query: 497 TAEKLLEDM 505
AE+L+ M
Sbjct: 391 DAEELMIKM 399
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 113/257 (43%), Gaps = 15/257 (5%)
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF---LISSLCQED--ETV 319
PD +++ C+ G+ +A AR + P++ A L+ C+ E
Sbjct: 94 PDVPLANRLVRDLCRRGRPADA------ARVVEACGPEATAATYGALVDGYCRAGLLEDA 147
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
+ + + + YA P I +LC V A +L M+ G P +N +
Sbjct: 148 RRVVGGMPAHVQASSAYAHNPL---IHALCERGRVADALVVLDGMLCRGCAPDVVTYNIL 204
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+ A K A+E++ MR+ G +P+ TY ++ G +++A E+LN
Sbjct: 205 LQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGC 264
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
+ + V Y+T+++G+C +E + A ++L+EM PN N +I +LC K L +
Sbjct: 265 KPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGL-LQKVT 323
Query: 500 KLLEDMRLKGLHLNGIT 516
LE M G N +T
Sbjct: 324 LYLEKMSKHGCTANVVT 340
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 122/272 (44%), Gaps = 2/272 (0%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+A L I +++ +K + + E K V N +I+ + G +A E+ +
Sbjct: 303 EATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLS 362
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+GC + TY ++ L ++ A + KM + LPD+ IIS++C+ G
Sbjct: 363 NMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKG 422
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+A V+ EK P + + +I L + + ++ AL++L++ + + K +
Sbjct: 423 LILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGK-MEQALELLNEMANKGFNTD-KMY 480
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+ SL + + ++ K+ G P ++N+V+ + G A+++L M S
Sbjct: 481 RVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVS 540
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
G PD TY L+ G G +EA E+L+
Sbjct: 541 CGCMPDESTYIILIEGLFYEGYSKEARELLSR 572
>gi|298204410|emb|CBI16890.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 158/345 (45%), Gaps = 12/345 (3%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
+IL+ L+ ++ + A +VF +G + + +L++ ++ + W V +K
Sbjct: 153 QILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKK 212
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M+ G +P+ +I CK G ++A + + ++P LIS C++
Sbjct: 213 MVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGM 272
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR-MKDVHGAKTLLSKMISEGPPPGNAVF 376
+ AL + D I ++S+I CR + D+ A L M EG PG +
Sbjct: 273 HYE-ALGIQDRMERGGVSPDIVTYNSLIYGFCREVNDLEEALRLREVMEVEGLHPGVVTY 331
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
NS++ + G + A +L M R ++PD T L++ Y G M A ++ + +
Sbjct: 332 NSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLE 391
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ T+ LI G+CKL E D A + L EM D G P+ Y+ L+ S D
Sbjct: 392 AGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSY----YDQD 447
Query: 497 TAE---KLLEDMRLKGLHLN-GITRALIRAVKELEEDAIENGEAL 537
E +L +++ KGL ++ + RALIR + ++ D IE+ E +
Sbjct: 448 NKEAVIRLPDELSRKGLFVDISVYRALIRRLCKI--DKIESAERI 490
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 139/314 (44%), Gaps = 4/314 (1%)
Query: 200 LNELIALFSKLGKGK---AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
L+ L + L K + ++V+ K G V N + I A + + A +
Sbjct: 187 LHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLN 246
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M PD +IS +CK G EA + + P LI C+E
Sbjct: 247 EMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREV 306
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
++ AL + + E + ++S++R LC + A LL++M P N
Sbjct: 307 NDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTC 366
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N++I+AY K GDM AM++ K M GLKPD +T+ L+ G+ +++ A E L E
Sbjct: 367 NTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLD 426
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
S TY L+ Y + + ++L +E+ G+ ++ Y LI+ LC K
Sbjct: 427 AGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLC-KIDKIE 485
Query: 497 TAEKLLEDMRLKGL 510
+AE++ M+ KG+
Sbjct: 486 SAERIFTLMQGKGM 499
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 87/183 (47%), Gaps = 3/183 (1%)
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A + M G P ++++ +KA ++ K M G+ P+++ + L+
Sbjct: 171 AIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIH 230
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
G +E+A ++LNE + TY+TLI YCK AL + + M+ GV P
Sbjct: 231 ACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSP 290
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAVKELEEDAIENGE 535
++ YN LI C + D A +L E M ++GLH +T +++R K EE I++
Sbjct: 291 DIVTYNSLIYGFCREVNDLEEALRLREVMEVEGLHPGVVTYNSILR--KLCEEGKIKDAN 348
Query: 536 ALV 538
L+
Sbjct: 349 RLL 351
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 107/263 (40%), Gaps = 4/263 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
++L+ C V E V E+ GV+T N ++ + GK K A + N
Sbjct: 296 NSLIYGFCREVNDLEEALRLREVMEVEGLHPGVVT---YNSILRKLCEEGKIKDANRLLN 352
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ + + T I A + A V +KM+E G PD +I FCK
Sbjct: 353 EMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLH 412
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ A + P S ++L+ S +D + + + D+ S + I +
Sbjct: 413 EVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNK-EAVIRLPDELSRKGLFVDISVY 471
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
++IR LC++ + A+ + + M +G + V+ S+ AY KAG A +ML M
Sbjct: 472 RALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDK 531
Query: 402 RGLKPDVYTYTGLMSGYANGGQM 424
R L + Y + YA G +
Sbjct: 532 RRLMITLKIYRCFSASYAGDGSI 554
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 110/296 (37%), Gaps = 51/296 (17%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRR-KIFDWAWSVCEKMI 259
N LI+L+ K G A + ++ G + TY I R + A + E M
Sbjct: 261 NTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREVNDLEEALRLREVME 320
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE-- 317
G P I+ C+ GK K+A+ + E+K+ P LI++ C+ +
Sbjct: 321 VEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMG 380
Query: 318 -TVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
+K+ ML+ +KP F ++I C++ +V AK L +M+ G P
Sbjct: 381 SAMKVKKKMLEA--------GLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPS 432
Query: 373 NAVFNSVISAY-----------------------------------SKAGDMTPAMEMLK 397
+ ++ ++ +Y K + A +
Sbjct: 433 YSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFT 492
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
LM+ +G+K D YT L Y G+ A ++L+E K ++ Y Y
Sbjct: 493 LMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASY 548
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 153/352 (43%), Gaps = 43/352 (12%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEIL--NELIALFSKLGKGKAAFEVFN 221
LLK++C + L ++ E G V + +++ + +I F K G A ++F
Sbjct: 188 LLKSLCDQGKSGQADDLLRMMAEGG----AVCSPDVVAYSTVIDGFFKEGDVNKACDLFK 243
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ G + TY + AL + + D A + +M+ G LP++ +I + G
Sbjct: 244 EMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTG 303
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ KEA V+ R + P ++ L+ S
Sbjct: 304 QWKEAVRVFKEMRRHSILPDVVTLSMLMGS------------------------------ 333
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
LC+ + A+ + M +G P + +++ Y+ G + ++ LM
Sbjct: 334 ------LCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLG 387
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+ PD+YT+ L+ YAN G +++A I NE + + + VTY T+I C++ + D
Sbjct: 388 DGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDD 447
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
A++ N+M D GV P+ Y+ LIQ C A++L+ ++ G+HL+
Sbjct: 448 AMEKFNQMIDQGVAPDKYAYHCLIQGFCTHG-SLLKAKELISEIMNNGMHLD 498
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 145/328 (44%), Gaps = 10/328 (3%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V L+ L+ K GK K A +VF+ G N +Y + + + + +
Sbjct: 324 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFD 383
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ-- 314
M+ G PD +I + G +A +++ R+ + P +I++LC+
Sbjct: 384 LMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 443
Query: 315 -EDETVKLALDMLDDFSGEA-RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
D+ ++ M+D G A KYA + +I+ C + AK L+S++++ G
Sbjct: 444 KMDDAMEKFNQMID--QGVAPDKYA---YHCLIQGFCTHGSLLKAKELISEIMNNGMHLD 498
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
F+S+I+ K G + A + L + GL P Y+ LM GY G+ME+A + +
Sbjct: 499 IVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFD 558
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
+ V Y TL+ GYCK+ D L L EM G++P+ YN +I L +A
Sbjct: 559 AMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL-FEA 617
Query: 493 LDWRTAEKLLEDMRLKGLHLNGITRALI 520
A+ +M G+ +N T ++
Sbjct: 618 GRTVPAKVKFHEMTESGIAMNKCTYNIV 645
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 127/292 (43%), Gaps = 1/292 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+ N LI ++ G A +FN+ D+G + TY I AL R D A
Sbjct: 394 IYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFN 453
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+MI+ G PD +I FC G +A + + M+ + +I++LC+
Sbjct: 454 QMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLG 513
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ A ++ D +S ++ C + + A + M+S G P + V+
Sbjct: 514 RVMD-AQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVY 572
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
++++ Y K G + + + + M +G+KP Y ++ G G+ A +E +
Sbjct: 573 GTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTE 632
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ ++ TY+ ++RG K FD A+ L E++ + V+ N+ N +I +
Sbjct: 633 SGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGM 684
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 132/294 (44%), Gaps = 3/294 (1%)
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
GD G + T+ I+A + + D A + +M + G PD +I+ C+ GK
Sbjct: 386 LGD-GIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGK 444
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+A + ++ + P + LI C +K A +++ + I FS
Sbjct: 445 MDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLK-AKELISEIMNNGMHLDIVFFS 503
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
S+I +LC++ V A+ + ++ G P V++ ++ Y G M A+ + M S
Sbjct: 504 SIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 563
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G++P+ Y L++GY G+++E + E + + S + Y+ +I G + A
Sbjct: 564 GIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPA 623
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+EM + G+ N YN +++ L K + A L +++R + +N IT
Sbjct: 624 KVKFHEMTESGIAMNKCTYNIVLRGL-FKNRCFDEAIFLFKELRAMNVKINIIT 676
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 116/267 (43%), Gaps = 38/267 (14%)
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDE 317
E G +PD ++ C GK+ +A + + E VVA+ +I +E +
Sbjct: 175 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGD 234
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
K A D+ + +SSV+ +LC+ + + A+ L +M+++G P N +N
Sbjct: 235 VNK-ACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYN 293
Query: 378 SVISAYSKAGDMTPAMEMLKLMRS-----------------------------------R 402
++I YS G A+ + K MR +
Sbjct: 294 NLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMK 353
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G P+V++YT +++GYA G + + ++ + + T++ LI+ Y D A
Sbjct: 354 GQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKA 413
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + NEM+D GV+P+V Y +I +LC
Sbjct: 414 MIIFNEMRDHGVKPDVVTYRTVIAALC 440
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 136/324 (41%), Gaps = 7/324 (2%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+IA ++GK A E FN+ D G ++ Y+ I+ A + +++ G
Sbjct: 435 VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNG 494
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
D II+ CK G+ +A ++ L ++P V + L+ C + K A
Sbjct: 495 MHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEK-A 553
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
L + D + + +++ C++ + +L +M+ +G P ++N +I
Sbjct: 554 LRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDG 613
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+AG PA M G+ + TY ++ G +EA + E + + +++
Sbjct: 614 LFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKIN 673
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
+T +T+I G + + A L + G+ P V Y+ +I +L + L AE +
Sbjct: 674 IITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGL-VEEAEDMF 732
Query: 503 EDMRLKGLH-----LNGITRALIR 521
M+ G LN + R L++
Sbjct: 733 SSMQNAGCEPDSRLLNHVVRELLK 756
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 6/164 (3%)
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR--GLKPDVYTYTGL 414
A +++ G + N ++ + +A A+++L L R+ G PDV++Y+ L
Sbjct: 130 ALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDIL-LHRTPELGCVPDVFSYSIL 188
Query: 415 MSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
+ + G+ +A ++L + + SP V Y T+I G+ K + + A L EM
Sbjct: 189 LKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQR 248
Query: 473 GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
G+ P+ Y+ ++ +LC KA AE L M KG+ N T
Sbjct: 249 GIPPDFVTYSSVVHALC-KARAMDKAEAFLRQMVNKGVLPNNWT 291
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 13/146 (8%)
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT-----PAMEMLKLMRS-------RGL 404
A LL ++ G P N ++A ++A PA+ + R+ R L
Sbjct: 48 AHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQGPRVL 107
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
P +TY LM + E A + + R++ + + L++G+C+ + D AL
Sbjct: 108 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALD 167
Query: 465 -LLNEMKDVGVQPNVDEYNKLIQSLC 489
LL+ ++G P+V Y+ L++SLC
Sbjct: 168 ILLHRTPELGCVPDVFSYSILLKSLC 193
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 43/228 (18%), Positives = 90/228 (39%), Gaps = 5/228 (2%)
Query: 180 LWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI 239
++D+ +G V + + L+ + +GK + A VF+ G N Y +
Sbjct: 521 IFDLTVNVGLHPTAV----VYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLV 576
Query: 240 EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
+ D S+ +M++ G P + II + G+ A V + E +
Sbjct: 577 NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIA 636
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
+ ++ L + + A+ + + K I +++I + + + V AK
Sbjct: 637 MNKCTYNIVLRGLFK-NRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKD 695
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
L + + G P ++ +I+ K G + A +M M++ G +PD
Sbjct: 696 LFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPD 743
>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 159/366 (43%), Gaps = 9/366 (2%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLT-VEILNELIALFSKLGKGKA 215
T D L++ +C ++D ++ G+L IL L++ ++++GK +
Sbjct: 108 TFNTYDLLMRNLCKVGLNDSAKIVFDCMRS-----DGILPDSSILELLVSSYARMGKLDS 162
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A N+ YG + Y + L ++ + D A + + +E +PD +I
Sbjct: 163 AKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIR 222
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML-DDFSGEAR 334
C+ G+ +A + +P LI+ C+ +E K D+L +D +
Sbjct: 223 GLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISK-GHDLLKEDMLIKGV 281
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
+ ++S+I C++ D+ A L +M+S G P + FN +I + K G+M AM
Sbjct: 282 SPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMV 341
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
M + M G PDV T+T L+ GY G++ + ++ E K + + TY LI C
Sbjct: 342 MYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALC 401
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG 514
K A L +K V P YN +I C KA A ++ +M+ K +
Sbjct: 402 KENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFC-KAGKVDEANFIVAEMQEKKCRPDK 460
Query: 515 ITRALI 520
IT ++
Sbjct: 461 ITFTIL 466
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 97/210 (46%), Gaps = 10/210 (4%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
+ + ++R+LC++ AK + M S+G P +++ ++S+Y++ G + A
Sbjct: 106 NHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKN 165
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
L + G+K + Y L++ ++EA + E + + +++ LIRG C
Sbjct: 166 FLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLC 225
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG 514
++ E D A + M + G P++ YN LI C + + L EDM +KG+ +
Sbjct: 226 RIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDV 285
Query: 515 ITRALI----------RAVKELEEDAIENG 534
IT I +A EL ++ + +G
Sbjct: 286 ITYTSIISGYCKLGDMKAASELFDEMVSSG 315
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 89/222 (40%), Gaps = 40/222 (18%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I+ + KLG KAA E+F++ G N T+ I+ + A + EKM+ G
Sbjct: 291 IISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLG 350
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
LPD +I +C+ G+ + ++ + + + P A LI++LC+E+ ++ A
Sbjct: 351 CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENR-IREA 409
Query: 323 LDMLDDFSGEARKYAIKPF--SSVIRSLCRMKDVHGAKTLLS------------------ 362
+ L ++ + KPF + VI C+ V A +++
Sbjct: 410 RNFLRHL--KSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILI 467
Query: 363 -----------------KMISEGPPPGNAVFNSVISAYSKAG 387
KMI P NS+IS KAG
Sbjct: 468 IGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAG 509
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 132/286 (46%), Gaps = 10/286 (3%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
T+ I L F+ + + +KM ++G P ++ W+CK G+ K A +
Sbjct: 235 TFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM 294
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLC 349
+ K + LI LC+ + K L + D RK I P ++++I
Sbjct: 295 KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRD-----MRKRMIHPNEVTYNTLINGFS 349
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
V A LL++M+S G P + FN++I + G+ A++M +M ++GL P
Sbjct: 350 NEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEV 409
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
+Y L+ G + + A K+N + +TY +I G CK D A+ LLNEM
Sbjct: 410 SYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 469
Query: 470 KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
G+ P++ Y+ LI C K ++TA++++ + GL NGI
Sbjct: 470 SKDGIDPDIVTYSALINGFC-KVGRFKTAKEIVCRIYRVGLSPNGI 514
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 114/269 (42%), Gaps = 7/269 (2%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G + TY I+ L + D A + +M + G PD +I+ FCK G+ K A
Sbjct: 438 GVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTA 497
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFSS 343
+ + P + + LI + C+ E +++ M+ G R + F+
Sbjct: 498 KEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMI--LEGHTRDHF--TFNV 553
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
++ SLC+ V A+ + M S+G P F+ +I+ Y +G+ A + M G
Sbjct: 554 LVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 613
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
P +TY L+ G GG + EA + L + + V Y+TL+ CK A+
Sbjct: 614 HHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAV 673
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
L EM + P+ Y LI LC K
Sbjct: 674 SLFGEMVQRSILPDSYTYTSLISGLCRKG 702
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 144/360 (40%), Gaps = 17/360 (4%)
Query: 127 ELDLHEDFVLKVLETPLVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKE 186
E DL F ++ + N VC + +G++D L C + E L + + +
Sbjct: 423 EFDLARGFYMR-------MKRNGVCVGRITYTGMIDGL----CKNGFLDEAVVLLNEMSK 471
Query: 187 IGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRK 246
G V ++N F K+G+ K A E+ + G N Y I R
Sbjct: 472 DGIDPDIVTYSALING----FCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG 527
Query: 247 IFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVA 306
A + E MI G D +++ CK GK EA + P
Sbjct: 528 CLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFD 587
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
LI+ E +K A + D+ + + S+++ LC+ + A+ L + +
Sbjct: 588 CLINGYGNSGEGLK-AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHA 646
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
++N++++A K+G++ A+ + M R + PD YTYT L+SG G+
Sbjct: 647 VPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVI 706
Query: 427 ACEILNEAKKNHSRL-SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
A EA+ + L + V Y + G K ++ + +M ++G P++ N +I
Sbjct: 707 AILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMI 766
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 139/351 (39%), Gaps = 48/351 (13%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I +S++GK + ++ + G+ N TY + S+RK ++ + +I
Sbjct: 763 NAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIIL 822
Query: 261 TGSLPDSEKVGKIISWFCK------GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
G LPD ++ C+ G K +A + + ++ + LIS C
Sbjct: 823 NGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFN------MLISKCCA 876
Query: 315 EDETVKLALDMLDDFSG-------------------------------EARKYAIKP--- 340
E + A D++ + E K I P
Sbjct: 877 NGE-INWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESR 935
Query: 341 -FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
+ +I LCR+ D+ A + +MI+ P N ++++ A +K G A +L+ M
Sbjct: 936 KYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFM 995
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
L P + ++T LM G + EA E+ +L V+Y+ LI G C +
Sbjct: 996 LKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDM 1055
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
A +L EMK G N Y LI+ L + + A+ +L+D+ +G
Sbjct: 1056 ALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGF 1106
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+ F+ +I LC + L+ KM G P +N+V+ Y K G A+E+L
Sbjct: 233 VATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLD 292
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M+S+G+ DV TY L+ ++ + +L + +K + VTY+TLI G+
Sbjct: 293 HMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEG 352
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+ A +LLNEM G+ PN +N LI + +++ A K+ M KGL
Sbjct: 353 KVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEG-NFKEALKMFYMMEAKGL 404
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 1/149 (0%)
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P N+++ + K+G+ LK M R + PDV T+ L++ G E++
Sbjct: 193 GFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKS 252
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
++ + +K+ + VTY+T++ YCK F A++LL+ MK GV +V YN LI
Sbjct: 253 SYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHD 312
Query: 488 LCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
LC ++ LL DMR + +H N +T
Sbjct: 313 LC-RSNRIAKGYLLLRDMRKRMIHPNEVT 340
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 126/307 (41%), Gaps = 34/307 (11%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N L+ K GK A E G + N ++ I A+SV ++M
Sbjct: 551 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 610
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEA-------HVVYTLAREKKMYPPQSVVAFLISSL 312
+ G P G ++ CKGG +EA H V A + MY L++++
Sbjct: 611 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAV-PAAVDTVMYNT------LLTAM 663
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMIS-E 367
C+ K GE + +I P ++S+I LCR KT+++ + + E
Sbjct: 664 CKSGNLAKAV-----SLFGEMVQRSILPDSYTYTSLISGLCR-----KGKTVIAILFAKE 713
Query: 368 GPPPGNAVFNSV-----ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG 422
GN + N V + KAG + + M + G PD+ T ++ GY+ G
Sbjct: 714 AEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMG 773
Query: 423 QMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
++E+ ++L E + + TY+ L+ GY K ++ + L + G+ P+ +
Sbjct: 774 KIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCH 833
Query: 483 KLIQSLC 489
L+ +C
Sbjct: 834 SLVLGIC 840
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 2/163 (1%)
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+ L +M+ P A FN +I+ G + +++ M G P + TY ++ Y
Sbjct: 219 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 278
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G+ + A E+L+ K TY+ LI C+ LL +M+ + PN
Sbjct: 279 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 338
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALI 520
YN LI + A +LL +M GL N +T ALI
Sbjct: 339 VTYNTLINGFSNEG-KVLIASQLLNEMLSFGLSPNHVTFNALI 380
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 93/238 (39%)
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A S+ +M++ LPDS +IS C+ GK A + A + P V+
Sbjct: 672 AVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFV 731
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
+ K + + I +++I RM + LL +M ++
Sbjct: 732 DGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGG 791
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P +N ++ YSK D++ + + + + G+ PD T L+ G +E +I
Sbjct: 792 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 851
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
L + T++ LI C E + A L+ M +G+ + D + ++ L
Sbjct: 852 LKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVL 909
>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 159/366 (43%), Gaps = 9/366 (2%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLT-VEILNELIALFSKLGKGKA 215
T D L++ +C ++D ++ G+L IL L++ ++++GK +
Sbjct: 108 TFNTYDLLMRNLCKVGLNDSAKIVFDCMRS-----DGILPDSSILELLVSSYARMGKLDS 162
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A N+ YG + Y + L ++ + D A + + +E +PD +I
Sbjct: 163 AKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIR 222
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML-DDFSGEAR 334
C+ G+ +A + +P LI+ C+ +E K D+L +D +
Sbjct: 223 GLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISK-GHDLLKEDMLIKGV 281
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
+ ++S+I C++ D+ A L +M+S G P + FN +I + K G+M AM
Sbjct: 282 SPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMV 341
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
M + M G PDV T+T L+ GY G++ + ++ E K + + TY LI C
Sbjct: 342 MYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALC 401
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG 514
K A L +K V P YN +I C KA A ++ +M+ K +
Sbjct: 402 KENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFC-KAGKVDEANFIVAEMQEKKCRPDK 460
Query: 515 ITRALI 520
IT ++
Sbjct: 461 ITFTIL 466
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 97/210 (46%), Gaps = 10/210 (4%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
+ + ++R+LC++ AK + M S+G P +++ ++S+Y++ G + A
Sbjct: 106 NHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKN 165
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
L + G+K + Y L++ ++EA + E + + +++ LIRG C
Sbjct: 166 FLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLC 225
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG 514
++ E D A + M + G P++ YN LI C + + L EDM +KG+ +
Sbjct: 226 RIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDV 285
Query: 515 ITRALI----------RAVKELEEDAIENG 534
IT I +A EL ++ + +G
Sbjct: 286 ITYTSIISGYCKLGDMKAASELFDEMVSSG 315
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 89/222 (40%), Gaps = 40/222 (18%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I+ + KLG KAA E+F++ G N T+ I+ + A + EKM+ G
Sbjct: 291 IISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLG 350
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
LPD +I +C+ G+ + ++ + + + P A LI++LC+E+ ++ A
Sbjct: 351 CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENR-IREA 409
Query: 323 LDMLDDFSGEARKYAIKPF--SSVIRSLCRMKDVHGAKTLLS------------------ 362
+ L ++ + KPF + VI C+ V A +++
Sbjct: 410 RNFLRHL--KSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILI 467
Query: 363 -----------------KMISEGPPPGNAVFNSVISAYSKAG 387
KMI P NS+IS KAG
Sbjct: 468 IGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAG 509
>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Glycine max]
Length = 693
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 115/263 (43%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G V + T + + A + E G P+ +I CK G K+A
Sbjct: 232 GFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQA 291
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
+ + P LI LC++ T K L E K + ++++I
Sbjct: 292 FEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMIS 351
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
CR + ++ A+ LLS+M +G P + ++I + KAG+ A E++ +M G P
Sbjct: 352 GYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSP 411
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
+V TY ++ G G+++EA ++L +N VTY LI +CK E AL L
Sbjct: 412 NVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLF 471
Query: 467 NEMKDVGVQPNVDEYNKLIQSLC 489
N+M G+QP++ Y LI C
Sbjct: 472 NKMVKSGIQPDIHSYTTLIAVFC 494
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 144/320 (45%), Gaps = 5/320 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET- 261
+I K G K AFE+ + G N T+ I+ L ++ + A+ + K++ +
Sbjct: 278 MIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSE 337
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
P+ +IS +C+ K A ++ + +E+ + P + LI C+ +
Sbjct: 338 NHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGN-FER 396
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A ++++ + E + +++++ LC+ V A +L G + +IS
Sbjct: 397 AYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILIS 456
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
+ K ++ A+ + M G++PD+++YT L++ + +M+E+ EA +
Sbjct: 457 EHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVP 516
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA-LDWRTAEK 500
+ TY ++I GYC+ ALK + M D G + Y LI LC ++ LD A
Sbjct: 517 TNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLD--EARC 574
Query: 501 LLEDMRLKGLHLNGITRALI 520
L + M KGL +TR +
Sbjct: 575 LYDAMIEKGLTPCEVTRVTL 594
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 140/331 (42%), Gaps = 4/331 (1%)
Query: 188 GEKEKG-VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRK 246
G E+G V+ L+ ++ F + G A F +F + G N + IE L +R
Sbjct: 227 GMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRG 286
Query: 247 IFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY-TLAREKKMYPPQSVV 305
A+ + E+M+ G P+ +I CK G ++A ++ L R + P
Sbjct: 287 SVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTY 346
Query: 306 AFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI 365
+IS C+ DE + A +L + ++++I C+ + A L++ M
Sbjct: 347 TAMISGYCR-DEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMN 405
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
EG P +N+++ K G + A ++LK GL D TYT L+S + +++
Sbjct: 406 EEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIK 465
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
+A + N+ K+ + +Y TLI +C+ + + E G+ P Y +I
Sbjct: 466 QALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMI 525
Query: 486 QSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
C + + R A K M G + IT
Sbjct: 526 CGYCREG-NLRLALKFFHRMSDHGCASDSIT 555
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 95/235 (40%), Gaps = 5/235 (2%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
L+ C + + Y L +++ E G V N ++ K G+ + A++V
Sbjct: 383 TLIDGHCKAGNFERAYELMNVMNEEGFSPN----VCTYNAIVDGLCKKGRVQEAYKVLKS 438
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G A++ TY I ++ A + KM+++G PD +I+ FC+ +
Sbjct: 439 GFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKR 498
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
KE+ + + A + P +I C+E ++LAL S +
Sbjct: 499 MKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGN-LRLALKFFHRMSDHGCASDSITYG 557
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
++I LC+ + A+ L MI +G P ++ Y K D AM +L+
Sbjct: 558 ALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYCKIDDGCSAMVVLE 612
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%), Gaps = 1/202 (0%)
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
+L K V+ ++ S E VK A++M+ + + + K + V++ +
Sbjct: 121 SLISNKNFEKAHEVMQCMVKSF-AEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTE 179
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
M V A+ L +M + G P + ++ Y K G++ + L M RG D T
Sbjct: 180 MGLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNAT 239
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
+ ++ + G + A + R + + + +I G CK A ++L EM
Sbjct: 240 LSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMV 299
Query: 471 DVGVQPNVDEYNKLIQSLCLKA 492
G +PNV + LI LC K
Sbjct: 300 GRGWKPNVYTHTALIDGLCKKG 321
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 8/182 (4%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LIA+F + + K + F + +G V +TY I R A +M + G
Sbjct: 489 LIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHG 548
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE--TVK 320
DS G +IS CK K EA +Y EK + P + L C+ D+ +
Sbjct: 549 CASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYCKIDDGCSAM 608
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
+ L+ L+ +K ++ ++++R LC + V A K++ + P + +
Sbjct: 609 VVLERLE------KKLWVRTVNTLVRKLCSERKVGMAALFFHKLLDKDPNVNRVTIAAFM 662
Query: 381 SA 382
+A
Sbjct: 663 TA 664
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 130/288 (45%), Gaps = 1/288 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N ++ GK K A EV ++ C + TY IEA R A + ++M +
Sbjct: 208 NTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRD 267
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD +++ CK G+ EA P ++ S+C +
Sbjct: 268 RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD 327
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A +L D + ++ F+ +I LCR + A +L KM G P + +N ++
Sbjct: 328 -AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLL 386
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ K M A+E L+ M SRG PD+ TY +++ G++E+A EILN+
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+TY+T+I G K + A+KLL+EM+ ++P+ Y+ L+ L
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 131/278 (47%), Gaps = 5/278 (1%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
+ L R + + E M+ G++PD +I FC+ GK ++A + +
Sbjct: 109 LRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGA 168
Query: 299 YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
P +IS C+ E + AL +LD S + +++++RSLC + A
Sbjct: 169 VPDVITYNVMISGYCKAGE-INNALSVLDRMSVSP---DVVTYNTILRSLCDSGKLKQAM 224
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+L +M+ P + +I A + + AM++L MR RG PDV TY L++G
Sbjct: 225 EVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGI 284
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G+++EA + LN+ + + + +T++ ++R C + A KLL +M G P+V
Sbjct: 285 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 344
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+N LI LC K L R + +LE M G N ++
Sbjct: 345 VTFNILINFLCRKGLLGRAID-ILEKMPKHGCQPNSLS 381
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 161/347 (46%), Gaps = 6/347 (1%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
L++A C G + L D +++ G V N L+ K G+ A + N
Sbjct: 245 LIEATCRDSGVGQAMKLLDEMRDRGCTPD----VVTYNVLVNGICKEGRLDEAIKFLNDM 300
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
GC N T+ + ++ + A + M+ G P +I++ C+ G
Sbjct: 301 PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLL 360
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
A + + P L+ C+E + + A++ L+ I +++
Sbjct: 361 GRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDR-AIEYLERMVSRGCYPDIVTYNT 419
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
++ +LC+ V A +L+++ S+G P +N+VI +KAG A+++L MR++
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
LKPD TY+ L+ G + G+++EA + +E ++ R + VT+++++ G CK + D A+
Sbjct: 480 LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAI 539
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
L M + G +P Y LI+ L + + + A +LL ++ KGL
Sbjct: 540 DFLVYMINRGCKPTETSYTILIEGLAYEGM-AKEALELLNELCNKGL 585
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 129/287 (44%), Gaps = 4/287 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F ++GK + A ++ G V + TY I + + A SV ++M +
Sbjct: 143 LIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS- 201
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD I+ C GK K+A V ++ YP LI + C+ D V A
Sbjct: 202 --PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR-DSGVGQA 258
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+ +LD+ + ++ ++ +C+ + A L+ M S G P N ++ +
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 318
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
G A ++L M +G P V T+ L++ G + A +IL + K+ + +
Sbjct: 319 MCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPN 378
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
++Y+ L+ G+CK ++ D A++ L M G P++ YN ++ +LC
Sbjct: 379 SLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALC 425
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 60/113 (53%), Gaps = 3/113 (2%)
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N+ + + G++ + L+ M G PD+ T L+ G+ G+ +A +IL +
Sbjct: 106 NNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEG 165
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + +TY+ +I GYCK E + AL +L+ M V P+V YN +++SLC
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLC 215
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 159/351 (45%), Gaps = 10/351 (2%)
Query: 162 DALLKAICSSVGKKEVYALWD--IVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
+ ++ A+C E Y L+ VK I V N LI F +GK K A +
Sbjct: 203 NTIIDAMCKYQLVSEAYGLFSEMAVKGISAD------VVTYNTLIYGFCIVGKLKEAIGL 256
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
N+ N TY ++AL + A SV M++ PD ++ +
Sbjct: 257 LNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFL 316
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
+ K+A V+ + P LI+ C+ ++ V AL++ + + I
Sbjct: 317 VYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCK-NKMVDEALNLFKEMHQKNMVPGIV 375
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
+SS+I LC+ + L+ +M G P ++S+I K G + A+ + M
Sbjct: 376 TYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKM 435
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
+ + ++P+++T+T L+ G GG++++A E+ + L+ TY+ +I G+CK
Sbjct: 436 KDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLL 495
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+ AL +L++M+D G PN + +I +L K + AEKLL M +GL
Sbjct: 496 EEALTMLSKMEDNGCIPNAFTFETIIIAL-FKKDENDKAEKLLRQMIARGL 545
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 131/290 (45%), Gaps = 1/290 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N+++ F+K+ A + ++ G + T I + +SV K++
Sbjct: 62 FNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKIL 121
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G PD+ + +I C G+ K+A + + Q A LI+ +C+ +T
Sbjct: 122 KRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDT- 180
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
+ A+ L G K + ++++I ++C+ + V A L S+M +G +N++
Sbjct: 181 RAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTL 240
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I + G + A+ +L M + + P+VYTY L+ G+++EA +L K
Sbjct: 241 IYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACV 300
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ +TY TL+ GY + E A + N M +GV P+V Y LI C
Sbjct: 301 KPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFC 350
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 87/179 (48%), Gaps = 1/179 (0%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
I F+ ++ S +MK A +L ++ +G P N +I+ + G +T +L
Sbjct: 59 IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLA 118
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
+ RG PD T L+ G GQ+++A ++ +L+ V+Y TLI G CK+
Sbjct: 119 KILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIG 178
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ A+K L ++ +P+V YN +I ++C L A L +M +KG+ + +T
Sbjct: 179 DTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQL-VSEAYGLFSEMAVKGISADVVT 236
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 74/155 (47%), Gaps = 1/155 (0%)
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+++V A + ++M+ P FN ++ +++K + A+ + + +G++PD+ T
Sbjct: 37 IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT 96
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
L++ + + GQ+ +L + K VT +TLI+G C + AL +++
Sbjct: 97 LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
G Q N Y LI +C K D R A K L +
Sbjct: 157 AQGFQLNQVSYATLINGVC-KIGDTRAAIKFLRKI 190
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 169/382 (44%), Gaps = 15/382 (3%)
Query: 144 VLGENLV--CFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILN 201
VLG L C+ VT V L+ A C G + L++ ++ G K V N
Sbjct: 203 VLGRQLQSKCYPDVVTCTV---LIDATCKESGVGQAMKLFNEMRNKGCKPD----VVTYN 255
Query: 202 ELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET 261
LI F K G+ A K YGC + ++ + +L + A + M+
Sbjct: 256 VLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRK 315
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
G LP +I++ C+ G +A V + + P LI C + +
Sbjct: 316 GCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCN-GKGIDR 374
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A++ L+ I ++ ++ +LC+ V A +LS++ S+G P +N+VI
Sbjct: 375 AIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVID 434
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
K G A+E+L+ M +GLKPD+ T T ++ G + G++ EA + + K+ R
Sbjct: 435 GLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRP 494
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+ Y+++I G CK ++ A+ L +M G +P Y LI+ + + L A KL
Sbjct: 495 NAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGL-AEDASKL 553
Query: 502 LEDMRLKGLHLNGITRALIRAV 523
++ +GL + R+L+ V
Sbjct: 554 SNELYSRGL----VKRSLVEKV 571
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 154/358 (43%), Gaps = 17/358 (4%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL++ C K + I++E G V+ V N LI+ + K G+ + A V ++
Sbjct: 119 ALIREFCKIGRTKNASQIMGILEESG----AVIDVTSYNVLISGYCKSGEIEEALRVLDR 174
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G N TY + +L R A V + +++ PD +I CK
Sbjct: 175 MG---VSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESG 231
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP-- 340
+A ++ R K P LI C+ LD F + Y +P
Sbjct: 232 VGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGR-----LDEAIRFLKKLPSYGCQPDV 286
Query: 341 --FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
+ ++RSLC A LL+ M+ +G P FN +I+ + G + A+ +L++
Sbjct: 287 ISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEM 346
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M G P+ ++ L+ G+ NG ++ A E L VTY+ L+ CK +
Sbjct: 347 MPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGK 406
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
D A+ +L+++ G P++ YN +I L LK A +LLE+M KGL + IT
Sbjct: 407 VDDAVVILSQLSSKGCSPSLISYNTVIDGL-LKVGKAELAVELLEEMCYKGLKPDLIT 463
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 109/242 (45%), Gaps = 12/242 (4%)
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
E M G PD +I FCK G+ K A + + E + LIS C+
Sbjct: 103 EYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKS 162
Query: 316 DETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
E ++ AL +LD + + P + +V+ SLC + A +L + + P
Sbjct: 163 GE-IEEALRVLD-------RMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYP 214
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+I A K + AM++ MR++G KPDV TY L+ G+ GG+++EA L
Sbjct: 215 DVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFL 274
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
+ + ++++ ++R C + A+KLL M G P+V +N LI LC K
Sbjct: 275 KKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQK 334
Query: 492 AL 493
L
Sbjct: 335 GL 336
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 74/177 (41%), Gaps = 32/177 (18%)
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
+R L R ++ L M ++G P ++I + K G A +++ ++ G
Sbjct: 86 LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGA 145
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNE------------------------------A 434
DV +Y L+SGY G++EEA +L+
Sbjct: 146 VIDVTSYNVLISGYCKSGEIEEALRVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLG 205
Query: 435 KKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
++ S+ P VT LI CK A+KL NEM++ G +P+V YN LI+ C
Sbjct: 206 RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFC 262
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 67/128 (52%), Gaps = 10/128 (7%)
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV 444
+ G++ L+ M ++G PDV T L+ + G+ + A +I+ +++ + +
Sbjct: 91 RNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVT 150
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLED 504
+Y+ LI GYCK E + AL++L+ M GV PN Y+ ++ SLC + KL +
Sbjct: 151 SYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRG-------KLKQA 200
Query: 505 MRLKGLHL 512
M++ G L
Sbjct: 201 MQVLGRQL 208
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 137/290 (47%), Gaps = 2/290 (0%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
N TY I L R A SV + M+ G PD ++ CKG ++A +
Sbjct: 166 NAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELI 225
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
L R + P L+ +C E + V AL++L + K + +++V++ LC
Sbjct: 226 DLMRAEGCTPNNVTYNVLMDGMCGEGD-VDDALELLRNLPSHGCKPSTVNYNTVLKGLCS 284
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ A L+++M+ E PP A FN VI + + G + A+++L+ M G ++ T
Sbjct: 285 AERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVT 344
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
Y +++G ++ A +L++ K + VTY+TL++G C ++ A +L++ M
Sbjct: 345 YNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMT 404
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
G P+ +N LI LC K L A ++ + M KG N IT + I
Sbjct: 405 QNGCLPDNVTFNTLIGFLCQKGL-MVDAIEVFKQMPDKGCTPNSITYSTI 453
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 131/299 (43%), Gaps = 11/299 (3%)
Query: 211 GKG-KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEK 269
G+G + A E+ + GC N TY ++ + D A + + G P +
Sbjct: 215 GRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVN 274
Query: 270 VGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDF 329
++ C + +A + T + P ++ +I SLC++ ++ A+ +L+
Sbjct: 275 YNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKG-LLQQAIQLLEKM 333
Query: 330 SGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
S I ++++I LC ++V GA LLSKM S G P +N+++ A
Sbjct: 334 SKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQW 393
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
A E++ M G PD T+ L+ G M +A E+ + + +TY T+
Sbjct: 394 VDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTI 453
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL--CLKALDWRTAEKLLEDMR 506
I G K + D AL+L NEM G P +K+ Q L CL D T E+ ++ +R
Sbjct: 454 ISGLAKATKLDQALELFNEMGHKGFNP-----DKIYQLLAECLN--DDDTIEEAIQTVR 505
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 133/298 (44%), Gaps = 32/298 (10%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
+ AL R D A + E + PD+ +++ C+ G+ +A V
Sbjct: 78 LSALVHRGDLDAALRLVES---SPRPPDAALANRLVRDLCRRGRPDDAERVV-----GAC 129
Query: 299 YPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYA----IKP----FSSVIRSL 348
P +VVA+ L C+ G+AR+ ++P ++ +I +L
Sbjct: 130 GPAATVVAYGALTDGYCRAGRL------------GDARRVVGGMPVQPNAYTYNPLIHTL 177
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
C V A ++L M+ G P +N ++ A K AME++ LMR+ G P+
Sbjct: 178 CERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNN 237
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNE 468
TY LM G G +++A E+L + + S V Y+T+++G C E + A +L+ E
Sbjct: 238 VTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTE 297
Query: 469 MKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAVKE 525
M PN +N +I SLC K L + A +LLE M G N +T A+I + E
Sbjct: 298 MLRENCPPNEATFNVVIYSLCRKGL-LQQAIQLLEKMSKHGCTANIVTYNAIINGLCE 354
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 144/329 (43%), Gaps = 12/329 (3%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
LL+A C G ++ L D+++ G V N L+ G A E+
Sbjct: 208 LLEATCKGRGYRQAMELIDLMRAEGCTPNNV----TYNVLMDGMCGEGDVDDALELLRNL 263
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
+GC + Y ++ L + + A + +M+ P+ +I C+ G
Sbjct: 264 PSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLL 323
Query: 284 KEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
++A + L + K ++V + +I+ LC E V A+ +L K I +
Sbjct: 324 QQA--IQLLEKMSKHGCTANIVTYNAIINGLC-EQRNVDGAMGLLSKMKSYGCKPDIVTY 380
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+++++ LC A+ L+ M G P N FN++I + G M A+E+ K M
Sbjct: 381 NTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPD 440
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP-VTYHTLIRGYCKLEEFD 460
+G P+ TY+ ++SG A ++++A E+ NE H +P Y L + +
Sbjct: 441 KGCTPNSITYSTIISGLAKATKLDQALELFNEM--GHKGFNPDKIYQLLAECLNDDDTIE 498
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A++ + +++D G+ P+ YN ++ LC
Sbjct: 499 EAIQTVRKLQDSGISPHTVLYNAILLGLC 527
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 113/289 (39%), Gaps = 43/289 (14%)
Query: 204 IALFSKLGKG--KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET 261
+ ++S KG + A ++ K +GC AN TY I L ++ D A + KM
Sbjct: 312 VVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSY 371
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
G PD ++ C + +A + + P LI LCQ+ L
Sbjct: 372 GCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQK----GL 427
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
+D ++ F +M +G P + ++++IS
Sbjct: 428 MVDAIEVF--------------------------------KQMPDKGCTPNSITYSTIIS 455
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
+KA + A+E+ M +G PD Y L + +EEA + + K S +
Sbjct: 456 GLAKATKLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVR--KLQDSGI 512
Query: 442 SP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
SP V Y+ ++ G C+ + + A+ ++ M G P+ Y LI+ L
Sbjct: 513 SPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGL 561
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 94/217 (43%), Gaps = 2/217 (0%)
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
A + +K YGC + TY ++ L + A + + M + G LPD+ +I
Sbjct: 360 GAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLI 419
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR 334
+ C+ G +A V+ +K P + +IS L + + + AL++ ++ G
Sbjct: 420 GFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATK-LDQALELFNEM-GHKG 477
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
K + + L + A + K+ G P ++N+++ + G A++
Sbjct: 478 FNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAID 537
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
++ M S G PD TY L+ G A G + EA E+L
Sbjct: 538 IMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELL 574
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 97/241 (40%), Gaps = 6/241 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+A++ +C L +K G K + N L+ + A E+ +
Sbjct: 346 NAIINGLCEQRNVDGAMGLLSKMKSYGCKPD----IVTYNTLLKGLCSAAQWVDAEELMD 401
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
GC+ + T+ I L ++ + A V ++M + G P+S IIS K
Sbjct: 402 NMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKAT 461
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
K +A ++ K P + + L++ +D+T++ A+ + +
Sbjct: 462 KLDQALELFNEMGHKGFNPDK--IYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLY 519
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
++++ LCR A +++ M+S G P + + +I + G + A E+L + S
Sbjct: 520 NAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCS 579
Query: 402 R 402
R
Sbjct: 580 R 580
>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
Length = 612
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 145/317 (45%), Gaps = 2/317 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N L+ + GK +A VF++ G T+ + + + + A ++ M
Sbjct: 245 FNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMA 304
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G PD G I CK G+ ++A ++ E+ + P V+ LI + C+E + V
Sbjct: 305 KAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGD-V 363
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
L++ + + K + +++++ CR++D+ A ++ +M +G P + ++
Sbjct: 364 TAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTL 423
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I K G++ AMEM + M G+ D TYT L+SG + G+ +A IL E +
Sbjct: 424 IDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGL 483
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
+ TY +I +CK + K L EM++ G P + YN ++ C + A+
Sbjct: 484 QPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLG-QMKNAD 542
Query: 500 KLLEDMRLKGLHLNGIT 516
LL M G+ N IT
Sbjct: 543 MLLNAMLNIGVCPNDIT 559
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 133/276 (48%), Gaps = 14/276 (5%)
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--L 308
A++ +++ G P++ + ++ + GK A V+ + + P +VV F L
Sbjct: 226 AYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQP--TVVTFNTL 283
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKM 364
+S +C+ + L+ + G K I P + + I+ LC+ + A + +M
Sbjct: 284 MSGMCKASD-----LNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEM 338
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
G P V ++I A+ K GD+T +E+ M +RG+K D+ Y L++G+ M
Sbjct: 339 CERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDM 398
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
+ A +I+ E +K+ + VTY TLI G CK E D A+++ EM D GV + Y L
Sbjct: 399 KAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTAL 458
Query: 485 IQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
I L KA AE++L +M GL + T ++
Sbjct: 459 ISGLS-KAGRSVDAERILCEMMEAGLQPDNTTYTMV 493
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 133/304 (43%), Gaps = 2/304 (0%)
Query: 206 LFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLP 265
L ++L A+ + D G + + + R A +V ++M+ G P
Sbjct: 216 LMNRLPSVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQP 275
Query: 266 DSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDM 325
++S CK A+ + L + + P I LC+ ++ A++M
Sbjct: 276 TVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGR-IQDAMEM 334
Query: 326 LDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSK 385
++ +++I + C+ DV L +M + G +N++++ + +
Sbjct: 335 FEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCR 394
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
DM A ++++ MR GLKPD TYT L+ G G+++ A E+ E L VT
Sbjct: 395 VRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVT 454
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
Y LI G K A ++L EM + G+QP+ Y +I + C K D +T K L++M
Sbjct: 455 YTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFC-KNGDVKTGFKHLKEM 513
Query: 506 RLKG 509
+ KG
Sbjct: 514 QNKG 517
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 83/202 (41%), Gaps = 36/202 (17%)
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
R+ V A ++ G PP FN ++ ++G + A + M RG++P V
Sbjct: 219 RLPSVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVV 278
Query: 410 TYTGLMSG--------------------------YANG---------GQMEEACEILNEA 434
T+ LMSG Y G G++++A E+ E
Sbjct: 279 TFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEM 338
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
+ + V TLI +CK + L+L EM GV+ ++ YN L+ C + D
Sbjct: 339 CERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFC-RVRD 397
Query: 495 WRTAEKLLEDMRLKGLHLNGIT 516
+ A ++E+MR GL + +T
Sbjct: 398 MKAANDIVEEMRKDGLKPDKVT 419
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 120/297 (40%), Gaps = 16/297 (5%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
A ++ +C + ++ +++ + E G V +L LI K G A E+ +
Sbjct: 317 AFIQGLCKTGRIQDAMEMFEEMCERGLNPNTV----VLTTLIDAHCKEGDVTAGLELRWE 372
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G A+ Y + R + A + E+M + G PD +I CK G+
Sbjct: 373 MATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGE 432
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP-- 340
A + ++ + LIS L + +V + E + ++P
Sbjct: 433 LDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDA-----ERILCEMMEAGLQPDN 487
Query: 341 --FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
++ VI + C+ DV L +M ++G PG +N V++ + G M A +L
Sbjct: 488 TTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNA 547
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
M + G+ P+ TY L+ G+ G++ + E L AK S Y +LI + K
Sbjct: 548 MLNIGVCPNDITYNILLDGHCKHGKVRDT-EELKSAKGMVSDFG--VYTSLINEFVK 601
>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 143/321 (44%), Gaps = 24/321 (7%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
LN LI FS+LG+ +F VF G N T I+ L C K+
Sbjct: 98 LNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGL------------CLKV- 144
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
G +I+ CK G+A+ A + K + P + +I S+C+ + V
Sbjct: 145 ---------SYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKV-KLV 194
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
A D+ + E + +S++I + + A L +KMI E P FN +
Sbjct: 195 NEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNIL 254
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+ + K G M + +M +G+KP+V TY LM GY Q+ +A I N +
Sbjct: 255 VDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGV 314
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
+Y+ +I G+CK+++ D A+ L +M + PNV Y LI LC K+ A
Sbjct: 315 NPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLC-KSGKISYAL 373
Query: 500 KLLEDMRLKGLHLNGITRALI 520
KL+++M +G+ + IT + I
Sbjct: 374 KLVDEMHDRGVPPDIITYSSI 394
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 147/327 (44%), Gaps = 34/327 (10%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K+G+ +AA ++ + N Y I+++ + K+ + A+ + +M+ G
Sbjct: 149 LINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEG 208
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC-----QEDE 317
PD +IS F GK K+A ++ + + P L+ C +E +
Sbjct: 209 ISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGK 268
Query: 318 TVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
TV A+ M K IKP + S++ C +K V+ A ++ + M G P
Sbjct: 269 TV-FAMMM---------KQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDT 318
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+N +I+ + K + AM + K M + + P+V TYT L+ G G++ A ++++E
Sbjct: 319 QSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDE 378
Query: 434 AKKNHSRLSP---VTYHTLIRGYCKLEEFDCALKLLNEMKDV--------GVQPNVDEYN 482
H R P +TY +++ CK + D A+ LL ++KD G +V Y
Sbjct: 379 M---HDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYT 435
Query: 483 KLIQSLCLKALDWRTAEKLLEDMRLKG 509
+IQ C+K L + A LL M G
Sbjct: 436 VMIQGFCVKGL-FNEALALLSKMEDNG 461
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 141/323 (43%), Gaps = 10/323 (3%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
V + N +I K+ AF+++++ G + TY I A +
Sbjct: 177 NVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLF 236
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
KMI PD ++ FCK GK KE V+ + ++ + P L+ C
Sbjct: 237 NKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLV 296
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ K A + + + + ++ +I C++K V A L KM + P
Sbjct: 297 KQVNK-ANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVT 355
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+ S+I K+G ++ A++++ M RG+ PD+ TY+ ++ Q+++A +L + K
Sbjct: 356 YTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLK 415
Query: 436 KN--------HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
L Y +I+G+C F+ AL LL++M+D G P+ Y +I S
Sbjct: 416 DQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILS 475
Query: 488 LCLKALDWRTAEKLLEDMRLKGL 510
L K + AEKLL +M +GL
Sbjct: 476 L-FKKDENDMAEKLLREMIARGL 497
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 14/151 (9%)
Query: 353 DVHGAKTLLSKMISE-GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTY 411
D H + ++++ + P P F ++ + K A+ + + M +G+ ++ T
Sbjct: 39 DEHNLVSSFNRLLHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTL 98
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR-------------GYCKLEE 458
L++ ++ GQ + + K + +T TLI+ G CK+ +
Sbjct: 99 NILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQ 158
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
AL+LL + VQPNV YN +I S+C
Sbjct: 159 ARAALQLLRRVDGKLVQPNVVMYNTIIDSMC 189
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 132/295 (44%), Gaps = 8/295 (2%)
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
G Y C N +Y I+ + D A+ + +M+ G PD +I CK
Sbjct: 192 GGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAM 251
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLC---QEDETVKLALDMLDDFSGEARKYAIKP 340
+A + +K + P +I C Q +E V+L L SG + +
Sbjct: 252 DKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRL----LKKMSGSGLQPDVVT 307
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+S +I+ C++ A+++ M+ +G P + +++ ++ Y+ G + ++L LM
Sbjct: 308 YSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMI 367
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G+ + + L+ YA G +++A E ++N R V+Y T+I CK +
Sbjct: 368 RDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVE 427
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
A+ N+M G+ PN+ + LI LC +W+ E+L +M +G+H + I
Sbjct: 428 DAVYHFNQMVSEGLSPNIISFTSLIHGLCSIG-EWKKVEELAFEMINRGIHPDAI 481
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 149/333 (44%), Gaps = 12/333 (3%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVL-TVEILNELIALFSKLGKGKAAFEVF 220
+AL+K +C V KK AL ++ + V N +I F K G+ A+ +F
Sbjct: 166 NALIKGLC--VEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLF 223
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
++ G + TY I+ L + + D A ++ + M + G +PD+ +I +C
Sbjct: 224 HEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSL 283
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
G+ +EA + + P + LI C+ + + F RK KP
Sbjct: 284 GQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCK----IGRCAEARSVFDSMVRK-GQKP 338
Query: 341 FSSVIRSLCRMKDVHGA----KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
S++ L GA + LL MI +G P + FN +I AY+K G + AM
Sbjct: 339 NSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAF 398
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
MR GL+PDV +Y+ ++ G++E+A N+ + +++ +LI G C +
Sbjct: 399 TEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSI 458
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
E+ +L EM + G+ P+ N ++ +LC
Sbjct: 459 GEWKKVEELAFEMINRGIHPDAIFMNTIMDNLC 491
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 135/295 (45%), Gaps = 14/295 (4%)
Query: 232 QETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYT 291
+ I A ++ D A + +M + G PD +I CK G+ ++A +
Sbjct: 375 HRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFN 434
Query: 292 LAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVI 345
+ + P ++++F LI LC E K+ ++ + E I P ++++
Sbjct: 435 QMVSEGLSP--NIISFTSLIHGLCSIGEWKKV-----EELAFEMINRGIHPDAIFMNTIM 487
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
+LC+ V A+ +I G P +N++I Y G M +++ L M S GL+
Sbjct: 488 DNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLR 547
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
PD +TY L++GY G++E+A + E + + +T + ++ G + A +L
Sbjct: 548 PDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAAREL 607
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
+M D G Q ++ YN ++ LC + A ++ ED+R K L+ T +++
Sbjct: 608 YMKMVDRGTQLRIETYNTVLGGLCENSC-VDEALRMFEDLRSKEFELDVRTFSIV 661
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 114/240 (47%), Gaps = 11/240 (4%)
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEA-HVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+TG + + ++I C G + +A +V+ E P LI LC E ++
Sbjct: 119 KTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKS 178
Query: 319 VKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
+ AL++L + + Y P +++VI + +V A L +M+ +G PP
Sbjct: 179 QE-ALELLIHMTADG-GYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVV 236
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
+NS+I KA M A+ +L+ M +G+ PD TY ++ GY + GQ+EEA +L
Sbjct: 237 TYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLK-- 294
Query: 435 KKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
K + S L P VTY LI+ YCK+ A + + M G +PN Y+ L+ K
Sbjct: 295 KMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKG 354
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 130/321 (40%), Gaps = 36/321 (11%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI K A + D G + + TY I + A + +KM
Sbjct: 239 NSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSG 298
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
+G PD +I ++CK G+ EA V+ K P ++ L+ + +
Sbjct: 299 SGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALID 358
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
+ D+LD + + + F+ +I + + V A T ++M G P +++VI
Sbjct: 359 VR-DLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVI 417
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI---------- 430
K G + A+ M S GL P++ ++T L+ G + G+ ++ E+
Sbjct: 418 HILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIH 477
Query: 431 -----LNEAKKN------------------HSRLSP--VTYHTLIRGYCKLEEFDCALKL 465
+N N H + P V+Y+TLI GYC + + D ++K
Sbjct: 478 PDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQ 537
Query: 466 LNEMKDVGVQPNVDEYNKLIQ 486
L+ M +G++P+ YN L+
Sbjct: 538 LDRMVSIGLRPDSWTYNSLLN 558
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 103/246 (41%), Gaps = 52/246 (21%)
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDV----HGAK---TLLSK 363
SL +ED AL++ D+ +AR ++ F+SV+ + R H A +L +
Sbjct: 27 SLGRED-----ALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNT 81
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDM---------------------------------- 389
M+ G A+ +I + G +
Sbjct: 82 MVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNR 141
Query: 390 -TPAMEML-KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS-RLSP--V 444
AM+M+ + M G PDV++Y L+ G + +EA E+L + SP V
Sbjct: 142 TDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVV 201
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLED 504
+Y+T+I G+ K E D A L +EM G+ P+V YN LI LC KA A +L+
Sbjct: 202 SYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLC-KAQAMDKAVAILQH 260
Query: 505 MRLKGL 510
M KG+
Sbjct: 261 MFDKGV 266
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 119/281 (42%), Gaps = 17/281 (6%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEK--EKGVLTVEI-LNELIALFSKLGKGKAAFEV 219
+L+ +CS +G+ W V+E+ + +G+ I +N ++ K G+ A +
Sbjct: 450 SLIHGLCS-IGE------WKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDF 502
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
F+ G + +Y I+ D + ++M+ G PDS +++ + K
Sbjct: 503 FDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFK 562
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV---KLALDMLDDFSGEARKY 336
G+ ++A +Y K + ++ L Q V +L + M+D +
Sbjct: 563 NGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVD----RGTQL 618
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
I+ +++V+ LC V A + + S+ F+ VI+A K G + A +
Sbjct: 619 RIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLF 678
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
M RG PDV TY+ ++ + G +EE+ + +KN
Sbjct: 679 SAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKN 719
>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 493
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 138/306 (45%), Gaps = 2/306 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
+ L+ +KL K +A +F G + ++ I+ R A S KM+
Sbjct: 76 FSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMM 135
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G P G +++ FC + +EA + P + +I SLC E+ V
Sbjct: 136 KLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLC-ENRQV 194
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
ALD+L+ + + ++S+I L + +LS M+ G P F+++
Sbjct: 195 DTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAM 254
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I + K G + A + M R + P++ TY L++G G ++EA ++LN
Sbjct: 255 IDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGF 314
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
+ VTY+TL+ GYCK + D A+K+L M GV + YN L Q C +A + AE
Sbjct: 315 FPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYC-QAGQFNAAE 373
Query: 500 KLLEDM 505
K+L M
Sbjct: 374 KVLARM 379
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 149/348 (42%), Gaps = 14/348 (4%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L+ C +E +L D + +G + V I N +I + + A +V N
Sbjct: 148 SLVNGFCHVNRIQEAMSLVDQIVGLGYEPN----VVIYNTIIDSLCENRQVDTALDVLNH 203
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + TY I L + + + M+ G PD +I F K G+
Sbjct: 204 MEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQ 263
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDD-FSGEARKYAI 338
EA Y ++ + P LI+ LC DE K+ M+ F A Y
Sbjct: 264 LLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTY-- 321
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
++++ C+ K V A +L M +G +N++ Y +AG A ++L
Sbjct: 322 ---NTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLAR 378
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M S G+ PD+YT+ L+ G G++E+A L + +K+ + + +TY+ +I+G CK +
Sbjct: 379 MVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANK 438
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
+ A L + GV P+V Y ++ L K L W A +L M+
Sbjct: 439 VEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRL-WLEAHELYRKMK 485
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 124/272 (45%), Gaps = 8/272 (2%)
Query: 248 FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP-PQSVVA 306
F+ A ++ M E+ LP +++ K K+ V +L R ++ + +
Sbjct: 54 FNDALTLFCDMAESRPLPSIVDFSRLLVAI---AKLKKYEAVISLFRHIEILGISHDLYS 110
Query: 307 F--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM 364
F LI C+ + LAL L + +I F S++ C + + A +L+ ++
Sbjct: 111 FSTLIDCFCRCSR-LSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQI 169
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
+ G P ++N++I + + + A+++L M G++PDV TY L++ + G+
Sbjct: 170 VGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKW 229
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
+ IL++ + +T+ +I + K + A K +EM V PN+ YN L
Sbjct: 230 GVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSL 289
Query: 485 IQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
I LC+ L A+K+L M KG N +T
Sbjct: 290 INGLCIHGL-LDEAKKVLNFMVSKGFFPNAVT 320
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 93/248 (37%), Gaps = 2/248 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V + +I +F K G+ A + +++ N TY I L + D A V
Sbjct: 248 VITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLN 307
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
M+ G P++ +++ +CK + +A + + + L CQ
Sbjct: 308 FMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAG 367
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ A +L I F+ ++ LC + A L + G +
Sbjct: 368 Q-FNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITY 426
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N +I KA + A + + +G+ PDV TYT +M G EA E+ + KK
Sbjct: 427 NIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMKK 486
Query: 437 NHSRLSPV 444
+ L P+
Sbjct: 487 DDG-LMPI 493
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 141/320 (44%), Gaps = 10/320 (3%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N ++ GK K A EV ++ C + TY IEA R A + ++M +
Sbjct: 208 NTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRD 267
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED---E 317
G PD +++ CK G+ EA P ++ S+C +
Sbjct: 268 RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD 327
Query: 318 TVKLALDML-DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
KL DML FS ++ F+ +I LCR + A +L KM G P + +
Sbjct: 328 AEKLLADMLRKGFSP-----SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY 382
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N ++ + K M A+E L+ M SRG PD+ TY +++ G++E+A EILN+
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+TY+T+I G K + A+KLL+EM+ ++P+ Y+ L+ L +
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREG-KVD 501
Query: 497 TAEKLLEDMRLKGLHLNGIT 516
A K + G+ N +T
Sbjct: 502 EAIKFFHEFERMGIRPNAVT 521
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 166/360 (46%), Gaps = 9/360 (2%)
Query: 151 CFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKL 210
C+ +T + L++A C G L D +++ G V N L+ K
Sbjct: 235 CYPDVITYTI---LIEATCRDSGVGHAMKLLDEMRDRGCTPD----VVTYNVLVNGICKE 287
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ A + N GC N T+ + ++ + A + M+ G P
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
+I++ C+ G A + + P L+ C+E + + A++ L+
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDR-AIEYLERMV 406
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
I +++++ +LC+ V A +L+++ S+G P +N+VI +KAG
Sbjct: 407 SRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTG 466
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A+++L MR++ LKPD TY+ L+ G + G+++EA + +E ++ R + VT+++++
Sbjct: 467 KAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIM 526
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
G CK + D A+ L M + G +PN Y LI+ L + + + A +LL ++ KGL
Sbjct: 527 LGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGM-AKEALELLNELCNKGL 585
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 131/278 (47%), Gaps = 5/278 (1%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
+ + R + + E M+ G++PD +I FC+ GK ++A + +
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 299 YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
P +IS C+ E + AL +LD S + +++++RSLC + A
Sbjct: 169 VPDVITYNVMISGYCKAGE-INNALSVLDRMSVSP---DVVTYNTILRSLCDSGKLKQAM 224
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+L +M+ P + +I A + + AM++L MR RG PDV TY L++G
Sbjct: 225 EVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGI 284
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G+++EA + LN+ + + + +T++ ++R C + A KLL +M G P+V
Sbjct: 285 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 344
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+N LI LC K L R + +LE M G N ++
Sbjct: 345 VTFNILINFLCRKGLLGRAID-ILEKMPQHGCQPNSLS 381
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 129/287 (44%), Gaps = 4/287 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F +LGK + A ++ G V + TY I + + A SV ++M +
Sbjct: 143 LIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS- 201
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD I+ C GK K+A V ++ YP LI + C+ D V A
Sbjct: 202 --PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR-DSGVGHA 258
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+ +LD+ + ++ ++ +C+ + A L+ M S G P N ++ +
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 318
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
G A ++L M +G P V T+ L++ G + A +IL + ++ + +
Sbjct: 319 MCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPN 378
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
++Y+ L+ G+CK ++ D A++ L M G P++ YN ++ +LC
Sbjct: 379 SLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALC 425
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 67/132 (50%), Gaps = 17/132 (12%)
Query: 372 GNAVFNSVISAYS--------------KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
GN ++SV S+++ + G++ + L+ M G PD+ T L+ G
Sbjct: 87 GNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRG 146
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
+ G+ +A +IL + + + +TY+ +I GYCK E + AL +L+ M V P+
Sbjct: 147 FCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPD 203
Query: 478 VDEYNKLIQSLC 489
V YN +++SLC
Sbjct: 204 VVTYNTILRSLC 215
>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
Length = 394
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 147/328 (44%), Gaps = 10/328 (3%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I K+ K A F + GC+ ++ TY + +L + ++ + E+M+ G
Sbjct: 55 VIGHLCKINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKG 114
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P+ +++ +CK G+ +A + + P S+ + LI LC+ D + A
Sbjct: 115 HSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEE-A 173
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++ + +G+ + + ++S I LC+ + AK + KMI G P +N +I +
Sbjct: 174 RELFEMAAGDVQDVIV--YTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYS 231
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL- 441
K ++ A E++ R P V T L+ G ++EEAC IL + R
Sbjct: 232 LCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAP 291
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
S VTY +I G CK + D A +L +M+ G P+V Y +I + C K A +L
Sbjct: 292 SVVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFC-KVGRLDEAREL 350
Query: 502 LEDMRLKG-----LHLNGITRALIRAVK 524
+ M +G + N + R RA K
Sbjct: 351 FQRMHERGCASDVVAYNILIRGYCRAAK 378
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 117/269 (43%), Gaps = 4/269 (1%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
+ K G+ A + + G + Y I+ L + + A + E + G + D
Sbjct: 129 YCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFE--MAAGDVQD 186
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
IS CK GK EA V+ E P +I SLC+ D V A +++
Sbjct: 187 VIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCK-DNRVSEAKELM 245
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP-PPGNAVFNSVISAYSK 385
D + + ++ LC+ + V A +L +M+ G P +++VI K
Sbjct: 246 DQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCK 305
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
A + A +L+ MR G PDV TYT ++ + G+++EA E+ + V
Sbjct: 306 ADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVA 365
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGV 474
Y+ LIRGYC+ + D A+ ++ EM G+
Sbjct: 366 YNILIRGYCRAAKVDEAIAMIEEMAGRGI 394
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 72/164 (43%), Gaps = 6/164 (3%)
Query: 331 GEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
GE + I P F S+IR LC + + A + +MI P ++ VI K
Sbjct: 3 GEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCKI 62
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA-KKNHSRLSPVT 445
+ A + M G PD TYT L+ + E+ +I E K HS VT
Sbjct: 63 NKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSP-ELVT 121
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
Y T++ GYCK D AL L+ +K G P+ Y+ LI LC
Sbjct: 122 YATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLC 165
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 5/189 (2%)
Query: 303 SVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTL 360
++V F LI LC+ + T K AL + K ++ VI LC++ + A +
Sbjct: 13 TIVTFGSLIRKLCELNFTNK-ALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASY 71
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
+M+ G P + ++ + KA ++ + M S+G P++ TY +++GY
Sbjct: 72 FEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCK 131
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
G++++A ++ K S Y TLI G CK + + A +L EM VQ +V
Sbjct: 132 AGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELF-EMAAGDVQ-DVIV 189
Query: 481 YNKLIQSLC 489
Y I LC
Sbjct: 190 YTSFISGLC 198
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 152/328 (46%), Gaps = 7/328 (2%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEIL--NELIALFSKLGKGKAAFEVFN 221
LLK++C + L ++ E G V + +++ N +I F K G A ++F
Sbjct: 188 LLKSLCDQGKSGQADDLLRMMAEGG----AVCSPDVVAYNTVIDGFFKEGDVNKACDLFK 243
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ G + TY + AL + + D A + +M+ G LP++ +I + G
Sbjct: 244 EMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTG 303
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ KEA V+ R + + P L+ SLC+ + +K A D+ D + + + + +
Sbjct: 304 QWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGK-IKEARDVFDTMAMKGQNPDVFSY 362
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+ ++ + L M+ +G P FN +I AY+ G + AM + MR
Sbjct: 363 NIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRD 422
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+KP+V TYT +++ G+M++A E N+ YH LI+G+C
Sbjct: 423 HGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLK 482
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A +L++E+ + G+ ++ ++ +I +LC
Sbjct: 483 AKELISEIMNNGMHLDIVLFSSIINNLC 510
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 145/328 (44%), Gaps = 10/328 (3%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V N L+ K GK K A +VF+ G + +Y + + + + +
Sbjct: 324 VVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 383
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ-- 314
M+ G P +I + G +A +++ R+ + P +I++LC+
Sbjct: 384 LMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIG 443
Query: 315 -EDETVKLALDMLDDFSGEA-RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
D+ ++ M+D G A KYA + +I+ C + AK L+S++++ G
Sbjct: 444 KMDDAMEKFNQMID--QGVAPDKYA---YHCLIQGFCTHGSLLKAKELISEIMNNGMHLD 498
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+F+S+I+ K G + A + L + GL P Y+ LM GY G+ME+A + +
Sbjct: 499 IVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFD 558
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
+ V Y TL+ GYCK+ D L L EM G++P+ YN +I L +A
Sbjct: 559 AMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL-FEA 617
Query: 493 LDWRTAEKLLEDMRLKGLHLNGITRALI 520
A+ +M G+ +N T +++
Sbjct: 618 GRTVPAKVKFHEMTESGIAMNKCTYSIV 645
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 119/267 (44%), Gaps = 38/267 (14%)
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDE 317
E G +PD ++ C GK+ +A + + E VVA+ +I +E +
Sbjct: 175 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGD 234
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
K A D+ + +SSV+ +LC+ + + A+ L +M+++G P N +N
Sbjct: 235 VNK-ACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYN 293
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE-AKK 436
++I YS G A+ + K MR + + PDV T+ LM G+++EA ++ + A K
Sbjct: 294 NLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMK 353
Query: 437 NHSR--------------------------------LSPV--TYHTLIRGYCKLEEFDCA 462
+ ++PV T++ LI+ Y D A
Sbjct: 354 GQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKA 413
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + NEM+D GV+PNV Y +I +LC
Sbjct: 414 MIIFNEMRDHGVKPNVLTYTTVIAALC 440
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 126/289 (43%), Gaps = 1/289 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N LI ++ G A +FN+ D+G N TY I AL R D A +MI
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMI 456
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G PD +I FC G +A + + M+ + + +I++LC+ +
Sbjct: 457 DQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVM 516
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
A ++ D +S ++ C + + A + M+S G P + V+ ++
Sbjct: 517 D-AQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTL 575
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
++ Y K G + + + + M +G+KP Y ++ G G+ A +E ++
Sbjct: 576 VNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGI 635
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
++ TY ++RG K FD A+ L E++ + V+ ++ N +I +
Sbjct: 636 AMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGM 684
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 163/387 (42%), Gaps = 22/387 (5%)
Query: 143 LVLGENL---VCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEI 199
L+LG+ + +C F + L+KA + + +++ +++ G K VLT
Sbjct: 384 LMLGDGIAPVICTF--------NVLIKAYANCGMLDKAMIIFNEMRDHGVKPN-VLT--- 431
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
+IA ++GK A E FN+ D G ++ Y+ I+ A + +++
Sbjct: 432 YTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIM 491
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
G D II+ CK G+ +A ++ L ++P V + L+ C +
Sbjct: 492 NNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKME 551
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
K AL + D + + +++ C++ + +L +M+ +G P ++N +
Sbjct: 552 K-ALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 610
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I +AG PA M G+ + TY+ ++ G +EA + E + +
Sbjct: 611 IDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNV 670
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
++ +T +T+I G + + A L + G+ P V Y+ +I +L + L AE
Sbjct: 671 KIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGL-VEEAE 729
Query: 500 KLLEDMRLKGLH-----LNGITRALIR 521
+ M+ G LN + R L++
Sbjct: 730 DMFSSMQNAGCEPDSRLLNHVVRELLK 756
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 74/146 (50%), Gaps = 6/146 (4%)
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSR--GLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+ N ++ + +A A+++L L R+ G PDV++Y+ L+ + G+ +A ++L
Sbjct: 148 IANHLLKGFCEAKRTDEALDIL-LHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLR 206
Query: 433 EAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
+ + SP V Y+T+I G+ K + + A L EM G+ P+ Y+ ++ +LC
Sbjct: 207 MMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALC- 265
Query: 491 KALDWRTAEKLLEDMRLKGLHLNGIT 516
KA AE L M KG+ N T
Sbjct: 266 KARAMDKAEAFLRQMVNKGVLPNNWT 291
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 13/146 (8%)
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT-----PAMEMLKLMRS-------RGL 404
A LL ++ G P N ++A ++A PA+ + R+ R L
Sbjct: 48 AHDLLDELQRRGTPVLERDLNGFLAAIARAPSSAACRSGPALAVALFNRAASRAQGPRVL 107
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
P +TY LM + E A + + R+ + + L++G+C+ + D AL
Sbjct: 108 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALD 167
Query: 465 -LLNEMKDVGVQPNVDEYNKLIQSLC 489
LL+ ++G P+V Y+ L++SLC
Sbjct: 168 ILLHRTPELGCVPDVFSYSILLKSLC 193
>gi|18420848|ref|NP_568460.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75154065|sp|Q8L6Y3.1|PP396_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g24830
gi|22655280|gb|AAM98230.1| putative protein [Arabidopsis thaliana]
gi|30725398|gb|AAP37721.1| At5g24830 [Arabidopsis thaliana]
gi|332005984|gb|AED93367.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 593
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 164/411 (39%), Gaps = 59/411 (14%)
Query: 154 KWVTSGVV------DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALF 207
K + SGV+ + LL +C + ++ L ++E+G V N LI
Sbjct: 146 KMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCV----SYNTLIKGL 201
Query: 208 SKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD------------------ 249
+ A +FN YG N+ T + AL ++ +
Sbjct: 202 CSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANA 261
Query: 250 ---------------------WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHV 288
A V ++M + DS II C G A+
Sbjct: 262 PLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYG 321
Query: 289 VYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSV 344
++ + P LIS+LC+E + D D G + + P + +
Sbjct: 322 FMCDMVKRGVNPDVFTYNTLISALCKEGK-----FDEACDLHGTMQNGGVAPDQISYKVI 376
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
I+ LC DV+ A L M+ P ++N VI Y + GD + A+ +L LM S G+
Sbjct: 377 IQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGV 436
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
KP+VYT L+ GY GG++ +A + NE + TY+ L+ C L A +
Sbjct: 437 KPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQ 496
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
L +EM G QP++ Y +L++ LC K + AE LL ++ G+ ++ +
Sbjct: 497 LYDEMLRRGCQPDIITYTELVRGLCWKG-RLKKAESLLSRIQATGITIDHV 546
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 120/249 (48%), Gaps = 21/249 (8%)
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE-KKMYPPQSVVAF--LISSL 312
+KMI +G +P +++ CK G ++A L RE ++M P + V++ LI L
Sbjct: 145 KKMIYSGVIPGLITHNHLLNGLCKAGYIEKAD---GLVREMREMGPSPNCVSYNTLIKGL 201
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGA--KTLLSKMI- 365
C + K AL + + + KY I+P + ++ +LC+ K V G K LL +++
Sbjct: 202 CSVNNVDK-ALYLFNTMN----KYGIRPNRVTCNIIVHALCQ-KGVIGNNNKKLLEEILD 255
Query: 366 -SEGPPPGNAVFNSVI-SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
S+ P + V +++ + K G++ A+E+ K M + + D Y ++ G + G
Sbjct: 256 SSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGN 315
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
M A + + K TY+TLI CK +FD A L M++ GV P+ Y
Sbjct: 316 MVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKV 375
Query: 484 LIQSLCLKA 492
+IQ LC+
Sbjct: 376 IIQGLCIHG 384
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 71/132 (53%)
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
++ +S++ G + A+ + K M G+ P + T+ L++G G +E+A ++ E
Sbjct: 122 SIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVRE 181
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
++ + V+Y+TLI+G C + D AL L N M G++PN N ++ +LC K +
Sbjct: 182 MREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGV 241
Query: 494 DWRTAEKLLEDM 505
+KLLE++
Sbjct: 242 IGNNNKKLLEEI 253
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 109/289 (37%), Gaps = 44/289 (15%)
Query: 209 KLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSE 268
K G A EV+ + A+ Y I L A+ M++ G PD
Sbjct: 277 KNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVF 336
Query: 269 KVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDD 328
+IS CK GK EA ++ + + P Q +I LC + ++ ++
Sbjct: 337 TYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGD-----VNRANE 391
Query: 329 FSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
F K ++ P ++ VI R D A ++L+ M+S G P N++I Y
Sbjct: 392 FLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYV 451
Query: 385 KAGDMTPAMEMLKLMRS-----------------------------------RGLKPDVY 409
K G + A + MRS RG +PD+
Sbjct: 452 KGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDII 511
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
TYT L+ G G++++A +L+ + + V + L + Y +L+
Sbjct: 512 TYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQR 560
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%)
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
SS++R LC + A L KMI G PG N +++ KAG + A +++ MR
Sbjct: 125 SSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMRE 184
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
G P+ +Y L+ G + +++A + N K R + VT + ++ C+
Sbjct: 185 MGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQ 238
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 137/305 (44%), Gaps = 28/305 (9%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G V N TY + L + + A ++ E M++ G PD ++ FCK + EA
Sbjct: 253 GYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEA 312
Query: 287 HVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIK----- 339
+ + P +VV F +I LC+ D SGEA + A++
Sbjct: 313 LELLHGMASRGCTP--NVVTFNSIIDGLCKSDR------------SGEAFQIALQVYNRM 358
Query: 340 ------PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
F+ +I C+ + A L +M+++ P F ++I KAG + A
Sbjct: 359 LVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAAR 418
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
++L LM + G+ P+V TY L+ G G++EE CE L E + +TY +L+
Sbjct: 419 DILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYAL 478
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
C+ D AL+L++++K G P+ YN L+ L K+ A +LE+M KG +
Sbjct: 479 CRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGL-WKSGKTEQAITVLEEMVGKGHQPD 537
Query: 514 GITRA 518
T A
Sbjct: 538 SFTFA 542
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 122/243 (50%), Gaps = 18/243 (7%)
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLS 362
++ SLC+ ET + L+ F GE + + P ++++I LC+ ++ L
Sbjct: 50 IVLQSLCRAGETAR----ALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFE 105
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG 422
+++ G P +N++I + KAGD+ A + M SRG P+V TY+ L++G G
Sbjct: 106 ELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVG 165
Query: 423 QMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKD--VGVQPNV 478
+++EA E++ E + + P +TY++ + G CK A +L+ ++D + V P+
Sbjct: 166 RIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDT 225
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAVKELEEDAIENGEAL 537
++ LI LC +T E +DM G N +T AL+ + + D +E A+
Sbjct: 226 VTFSTLIDGLCKCG---QTDEACNDDMIAGGYVPNVVTYNALVNGL--CKADKMERAHAM 280
Query: 538 VEA 540
+E+
Sbjct: 281 IES 283
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 149/332 (44%), Gaps = 22/332 (6%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
T+ N +I K + A E+F + G + TY I++L + + A +
Sbjct: 80 TIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLH 139
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAH-VVYTLAREKKMYPPQSVV--AFLISSL 312
M G +P+ +I+ CK G+ EA ++ + R+ P + +FL L
Sbjct: 140 GGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFL-DGL 198
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEG 368
C++ T + M G R + P FS++I LC+ A MI+ G
Sbjct: 199 CKQSMTAEACELMRSLRDGSLR---VSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGG 253
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P +N++++ KA M A M++ M +G+ PDV TY+ L+ + +++EA
Sbjct: 254 YVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEAL 313
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKL----EEFDCALKLLNEMKDVGVQPNVDEYNKL 484
E+L+ + VT++++I G CK E F AL++ N M + P+ +N L
Sbjct: 314 ELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRM----LVPDKVTFNIL 369
Query: 485 IQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
I C KA ++ A L E+M K + + +T
Sbjct: 370 IAGAC-KAGNFEQASALFEEMVAKNMQPDVMT 400
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 155/372 (41%), Gaps = 13/372 (3%)
Query: 110 LLQSSVDGYLESSLDSFELDLHEDFVLKVLETPLVLGENLVCFFKWVTSGVVDALLKAIC 169
L++S DG L S D+ D + K +T ++++ +AL+ +C
Sbjct: 210 LMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNDDMIAGGYVPNVVTYNALVNGLC 269
Query: 170 SSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCV 229
+ + +A+ + + + G V+T +L + F K + A E+ + GC
Sbjct: 270 KADKMERAHAMIESMVDKGVTPD-VITYSVL---VDAFCKASRVDEALELLHGMASRGCT 325
Query: 230 ANQETYYFTIEALSRR----KIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKE 285
N T+ I+ L + + F A V +M+ +PD +I+ CK G ++
Sbjct: 326 PNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRML----VPDKVTFNILIAGACKAGNFEQ 381
Query: 286 AHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVI 345
A ++ K M P LI LC+ + V+ A D+LD + ++ ++
Sbjct: 382 ASALFEEMVAKNMQPDVMTFGALIDGLCKAGQ-VEAARDILDLMGNLGVPPNVVTYNVLV 440
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
LC+ + L +M+S G P + + S++ A +A A++++ ++S G
Sbjct: 441 HGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWD 500
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
PD TY L+ G G+ E+A +L E + T+ G + ++L
Sbjct: 501 PDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMEL 560
Query: 466 LNEMKDVGVQPN 477
L + G+ P+
Sbjct: 561 LRVVLAKGMLPD 572
>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
Length = 1096
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 132/286 (46%), Gaps = 10/286 (3%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
T+ I L F+ + + +KM ++G P ++ W+CK G+ K A +
Sbjct: 195 TFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM 254
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLC 349
+ K + LI LC+ + K L + D RK I P ++++I
Sbjct: 255 KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRD-----MRKRMIHPNEVTYNTLINGFS 309
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
V A LL++M+S G P + FN++I + G+ A++M +M ++GL P
Sbjct: 310 NEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEV 369
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
+Y L+ G + + A K+N + +TY +I G CK D A+ LLNEM
Sbjct: 370 SYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 429
Query: 470 KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
G+ P++ Y+ LI C K ++TA++++ + GL NGI
Sbjct: 430 SKDGIDPDIVTYSALINGFC-KVGRFKTAKEIVCRIYRVGLSPNGI 474
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 114/269 (42%), Gaps = 7/269 (2%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G + TY I+ L + D A + +M + G PD +I+ FCK G+ K A
Sbjct: 398 GVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTA 457
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFSS 343
+ + P + + LI + C+ E +++ M+ G R + F+
Sbjct: 458 KEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMI--LEGHTRDHF--TFNV 513
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
++ SLC+ V A+ + M S+G P F+ +I+ Y +G+ A + M G
Sbjct: 514 LVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 573
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
P +TY L+ G GG + EA + L + + V Y+TL+ CK A+
Sbjct: 574 HHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAV 633
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
L EM + P+ Y LI LC K
Sbjct: 634 SLFGEMVQRSILPDSYTYTSLISGLCRKG 662
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 144/360 (40%), Gaps = 17/360 (4%)
Query: 127 ELDLHEDFVLKVLETPLVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKE 186
E DL F ++ + N VC + +G++D L C + E L + + +
Sbjct: 383 EFDLARGFYMR-------MKRNGVCVGRITYTGMIDGL----CKNGFLDEAVVLLNEMSK 431
Query: 187 IGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRK 246
G V ++N F K+G+ K A E+ + G N Y I R
Sbjct: 432 DGIDPDIVTYSALING----FCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG 487
Query: 247 IFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVA 306
A + E MI G D +++ CK GK EA + P
Sbjct: 488 CLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFD 547
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
LI+ E +K A + D+ + + S+++ LC+ + A+ L + +
Sbjct: 548 CLINGYGNSGEGLK-AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHA 606
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
++N++++A K+G++ A+ + M R + PD YTYT L+SG G+
Sbjct: 607 VPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVI 666
Query: 427 ACEILNEAKKNHSRL-SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
A EA+ + L + V Y + G K ++ + +M ++G P++ N +I
Sbjct: 667 AILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMI 726
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 139/351 (39%), Gaps = 48/351 (13%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I +S++GK + ++ + G+ N TY + S+RK ++ + +I
Sbjct: 723 NAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIIL 782
Query: 261 TGSLPDSEKVGKIISWFCK------GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
G LPD ++ C+ G K +A + + ++ + LIS C
Sbjct: 783 NGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFN------MLISKCCA 836
Query: 315 EDETVKLALDMLDDFSG-------------------------------EARKYAIKP--- 340
E + A D++ + E K I P
Sbjct: 837 NGE-INWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESR 895
Query: 341 -FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
+ +I LCR+ D+ A + +MI+ P N ++++ A +K G A +L+ M
Sbjct: 896 KYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFM 955
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
L P + ++T LM G + EA E+ +L V+Y+ LI G C +
Sbjct: 956 LKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDM 1015
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
A +L EMK G N Y LI+ L + + A+ +L+D+ +G
Sbjct: 1016 ALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGF 1066
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+ F+ +I LC + L+ KM G P +N+V+ Y K G A+E+L
Sbjct: 193 VATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLD 252
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M+S+G+ DV TY L+ ++ + +L + +K + VTY+TLI G+
Sbjct: 253 HMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEG 312
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+ A +LLNEM G+ PN +N LI + +++ A K+ M KGL
Sbjct: 313 KVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEG-NFKEALKMFYMMEAKGL 364
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 1/149 (0%)
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P N+++ + K+G+ LK M R + PDV T+ L++ G E++
Sbjct: 153 GFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKS 212
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
++ + +K+ + VTY+T++ YCK F A++LL+ MK GV +V YN LI
Sbjct: 213 SYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHD 272
Query: 488 LCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
LC ++ LL DMR + +H N +T
Sbjct: 273 LC-RSNRIAKGYLLLRDMRKRMIHPNEVT 300
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 126/307 (41%), Gaps = 34/307 (11%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N L+ K GK A E G + N ++ I A+SV ++M
Sbjct: 511 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 570
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEA-------HVVYTLAREKKMYPPQSVVAFLISSL 312
+ G P G ++ CKGG +EA H V A + MY L++++
Sbjct: 571 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAV-PAAVDTVMYNT------LLTAM 623
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMIS-E 367
C+ K GE + +I P ++S+I LCR KT+++ + + E
Sbjct: 624 CKSGNLAKAV-----SLFGEMVQRSILPDSYTYTSLISGLCR-----KGKTVIAILFAKE 673
Query: 368 GPPPGNAVFNSV-----ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG 422
GN + N V + KAG + + M + G PD+ T ++ GY+ G
Sbjct: 674 AEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMG 733
Query: 423 QMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
++E+ ++L E + + TY+ L+ GY K ++ + L + G+ P+ +
Sbjct: 734 KIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCH 793
Query: 483 KLIQSLC 489
L+ +C
Sbjct: 794 SLVLGIC 800
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 2/163 (1%)
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+ L +M+ P A FN +I+ G + +++ M G P + TY ++ Y
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 238
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G+ + A E+L+ K TY+ LI C+ LL +M+ + PN
Sbjct: 239 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 298
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALI 520
YN LI + A +LL +M GL N +T ALI
Sbjct: 299 VTYNTLINGFSNEG-KVLIASQLLNEMLSFGLSPNHVTFNALI 340
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 98/254 (38%)
Query: 235 YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR 294
Y + A+ + A S+ +M++ LPDS +IS C+ GK A + A
Sbjct: 616 YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE 675
Query: 295 EKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDV 354
+ P V+ + K + + I +++I RM +
Sbjct: 676 ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 735
Query: 355 HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
LL +M ++ P +N ++ YSK D++ + + + + G+ PD T L
Sbjct: 736 EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 795
Query: 415 MSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV 474
+ G +E +IL + T++ LI C E + A L+ M +G+
Sbjct: 796 VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 855
Query: 475 QPNVDEYNKLIQSL 488
+ D + ++ L
Sbjct: 856 SLDKDTCDAMVSVL 869
>gi|222622462|gb|EEE56594.1| hypothetical protein OsJ_05954 [Oryza sativa Japonica Group]
Length = 579
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 148/350 (42%), Gaps = 34/350 (9%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + K G+ F++ GCV N + IEAL + K+ D V KM+E
Sbjct: 204 LIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVEND 263
Query: 263 SLPDS-------------------EKVGKIISWF-------------CKGGKAKEAHVVY 290
P+ +V I S F CK G A EAH V+
Sbjct: 264 CQPNQFTYSITLDILATEGQLHRLNEVLDICSRFMNRSIYSYLVKSLCKSGHASEAHNVF 323
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
+ ++ LC ++T++ A+D+L + + ++ V +L +
Sbjct: 324 CRMWNSHEKGDRDAFVSMLEVLCNAEKTLE-AIDLLHMMPEKGIVTDVGMYNMVFSALGK 382
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+K V L KM + G P +N +IS+Y + G + A E+ ++M + KPDV T
Sbjct: 383 LKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVT 442
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
Y L++ G ++EA + E ++ TY LI + K + + A L +EM
Sbjct: 443 YNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMI 502
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
G PN+ YN L+ L + A KL E M+ +GL + IT +++
Sbjct: 503 SEGCTPNIVTYNILLDCLERRG-KTEEAHKLYETMKQQGLIPDSITYSIL 551
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 112/278 (40%), Gaps = 7/278 (2%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
TY ++A R + + V E+M G D ++ K G +A V+
Sbjct: 130 TYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDM 189
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
++K P LI + T K L D+ + + F+++I +L + K
Sbjct: 190 KQKHCVPDAYTYTILIRMSGKAGRTSKF-LSFFDEMVSKGCVLNLIAFNTIIEALGKNKM 248
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
V +LSKM+ P ++ + + G + E+L + SR + +Y+Y
Sbjct: 249 VDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRLNEVLDIC-SRFMNRSIYSY-- 305
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
L+ G EA + +H + + +++ C E+ A+ LL+ M + G
Sbjct: 306 LVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKG 365
Query: 474 VQPNVDEYNKLIQSLC-LKALDWRTAEKLLEDMRLKGL 510
+ +V YN + +L LK + + L + M+ G+
Sbjct: 366 IVTDVGMYNMVFSALGKLKQVSF--ISNLFDKMKTNGI 401
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 70/172 (40%), Gaps = 2/172 (1%)
Query: 152 FFKWVTSGVVDALL--KAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSK 209
F K T+G++ + + SS G+ + + E+ E V N LI K
Sbjct: 393 FDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGK 452
Query: 210 LGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEK 269
G A +F + + G + TY IE + + A S+ ++MI G P+
Sbjct: 453 HGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVT 512
Query: 270 VGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
++ + GK +EAH +Y +++ + P + L + TV++
Sbjct: 513 YNILLDCLERRGKTEEAHKLYETMKQQGLIPDSITYSILERLESRSQRTVRI 564
>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 155/385 (40%), Gaps = 52/385 (13%)
Query: 176 EVYALWDIVK---EIGEKEKGV------------LTVEILNELIALFSKLGKGKAAFEVF 220
+VY+ W +K E G KG V I LI + G A +F
Sbjct: 106 DVYSFWITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMF 165
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
++ D G ANQ Y I ++ + + +KM G LP+ +I+ +C+
Sbjct: 166 SRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRD 225
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
GK A V+ ++ + LI LC++ + K A +L+ +
Sbjct: 226 GKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSK-AEGLLERMKRAHINPTTRT 284
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG------------- 387
F+ ++ LC + A + L K+ G P +N +IS +SK G
Sbjct: 285 FNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREME 344
Query: 388 ----------------------DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
D+ A EM LM+ GL PD +TY L+ G G M
Sbjct: 345 DRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMV 404
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
EA ++ + H + + V Y+T+I GYCK ALK L EM GV PNV Y I
Sbjct: 405 EASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTI 464
Query: 486 QSLCLKALDWRTAEKLLEDMRLKGL 510
Q LC K A++LL++M GL
Sbjct: 465 QILC-KDGKSIEAKRLLKEMTEAGL 488
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 76/191 (39%), Gaps = 35/191 (18%)
Query: 364 MISEGPPPGNAVFNS----------------------------------VISAYSKAGDM 389
M+ +G P + FN+ I A+ + G++
Sbjct: 64 MVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRTQFDVYSFWITIKAFCENGNV 123
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
+ E+L M + G+ P+V+ YT L+ G +++A + + + Y +
Sbjct: 124 SKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIM 183
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
I G+ K +L +MK VGV PN+ YN LI C A K+ +++ +G
Sbjct: 184 INGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDG-KLSLAFKVFDEISKRG 242
Query: 510 LHLNGITRALI 520
+ N +T ++
Sbjct: 243 VACNAVTYNIL 253
>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
Length = 991
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 148/326 (45%), Gaps = 6/326 (1%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
L++ +C + ++ L+ ++K G V LI+ K G+ A +F+
Sbjct: 259 LIQGLCDAKCVRKALVLFLMMKRDGCSPN----VRAFTFLISGLCKSGRVGDARLLFDAM 314
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
G V + TY I S+ + A + E M + G PD +I C K
Sbjct: 315 PQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KT 373
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
+EA + A ++ P LI+ C E AL M + K ++ F
Sbjct: 374 EEAEELLNNAVKEGFTPTVVTFTNLINGYCMA-EKFDDALRMKNKMMSSKCKLDLQVFGK 432
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
+I SL + + AK LL+++ + G P + S+I Y K+G + A+E+LK+M G
Sbjct: 433 LINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDG 492
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
+P+ +TY LM G ++ +A +L + +K+ + +TY TL++G C +FD A
Sbjct: 493 CQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF 552
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLC 489
+L M+ G++P+ Y L +LC
Sbjct: 553 RLFEMMEQNGLKPDEHAYAVLTDALC 578
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 130/297 (43%), Gaps = 17/297 (5%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A + + G + + Y F + +L+R + ++ V ++++ G LPD+ +I
Sbjct: 132 AIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIK 191
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA--LDMLDDFSGEA 333
+CK G AH + L E + P L+ C+ E K M+ +
Sbjct: 192 SYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQR 251
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
+Y+ ++ +I+ LC K V A L M +G P F +IS K+G + A
Sbjct: 252 NEYS---YTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDAR 308
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
+ M G+ P V TY ++ GY+ G+M +A +I +KN TY+TLI G
Sbjct: 309 LLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGL 368
Query: 454 C--KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLK 508
C K EE A +LLN G P V + LI C+ AEK + +R+K
Sbjct: 369 CDQKTEE---AEELLNNAVKEGFTPTVVTFTNLINGYCM-------AEKFDDALRMK 415
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 122/283 (43%), Gaps = 4/283 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I + K GK A EV GC N TY + L + K A ++ KM + G
Sbjct: 468 IIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDG 527
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+P+ ++ C A ++ + + + P + A L +LC+ +
Sbjct: 528 IIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAY 587
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++ + Y ++++I + + A TL+ +MI EG P + ++ ++ A
Sbjct: 588 SFIVRKGVALTKVY----YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHA 643
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
K + A+ +L M RG+K ++ YT L+ G+ + A + NE + + S
Sbjct: 644 LCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPS 703
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
TY I YCK + A L+ +M+ GV P+V YN LI
Sbjct: 704 ATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILI 746
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 143/343 (41%), Gaps = 26/343 (7%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGV-LTVEILNELIALFSKLGKGKAAFEVFNK 222
L A+C + +E Y+ IV+ KGV LT LI FSK G A + +
Sbjct: 573 LTDALCKAGRAEEAYSF--IVR------KGVALTKVYYTTLIDGFSKAGNTDFAATLIER 624
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
D GC + TY + AL ++K + A + ++M G +I + GK
Sbjct: 625 MIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGK 684
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
A +Y P + I+S C+E ++ A D++ E + ++
Sbjct: 685 HDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGR-LEDAEDLILKMEREGVAPDVVTYN 743
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS-------AYSKAGDMTPAMEM 395
+I M + A + L +M+ P + ++ AY ++ D + +
Sbjct: 744 ILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNL 803
Query: 396 LKL---------MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
++L M GL P V TY+ L++G+ G++EEAC +L+ + Y
Sbjct: 804 IELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIY 863
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
LI+ C + F+ AL ++ M + G QP ++ Y L+ LC
Sbjct: 864 TLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLC 906
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 144/348 (41%), Gaps = 34/348 (9%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIG----EKEKGVLTVEILNELIALFSKLGKGKAAFE 218
LL+ C + L++++++ G E VLT + K G+ + A+
Sbjct: 537 TLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDAL--------CKAGRAEEAYS 588
Query: 219 VFNKFGDYGCVANQETYYFT-IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
+ G VA + YY T I+ S+ D+A ++ E+MI+ G PDS ++
Sbjct: 589 FIVRKG----VALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHAL 644
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
CK + EA + + + LI + +E + A M ++ + K +
Sbjct: 645 CKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDH-AKRMYNEMTSSGHKPS 703
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
++ I S C+ + A+ L+ KM EG P +N +I G + A LK
Sbjct: 704 ATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLK 763
Query: 398 LMRSRGLKPDVYTYTGLM----------------SGYANGGQMEEACEILNEAKKNHSRL 441
M +P+ +TY L+ SG N +++ ++L K+
Sbjct: 764 RMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNP 823
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ TY +LI G+CK + A LL+ M G+ PN D Y LI+ C
Sbjct: 824 TVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCC 871
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 141/332 (42%), Gaps = 11/332 (3%)
Query: 192 KGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWA 251
K L +++ +LI K + K A E+ N+ G V N TY I+ + D A
Sbjct: 422 KCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIA 481
Query: 252 WSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISS 311
V + M G P++ ++ K K +A + T ++ + P L+
Sbjct: 482 LEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQG 541
Query: 312 LCQE---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
C E D +L +M++ + ++A ++ + +LC+ A + + + +G
Sbjct: 542 QCDEHDFDNAFRL-FEMMEQNGLKPDEHA---YAVLTDALCKAGRAEEAYSFI---VRKG 594
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
+ ++I +SKAG+ A +++ M G PD YTY+ L+ ++ EA
Sbjct: 595 VALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEAL 654
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
IL++ + + Y LI + + D A ++ NEM G +P+ Y I S
Sbjct: 655 PILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSY 714
Query: 489 CLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
C K AE L+ M +G+ + +T ++
Sbjct: 715 C-KEGRLEDAEDLILKMEREGVAPDVVTYNIL 745
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 116/288 (40%), Gaps = 4/288 (1%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+ K K A + K G + N TY ++ FD A+ + E M +
Sbjct: 501 NSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQ 560
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD + CK G+A+EA Y+ K + + LI + T
Sbjct: 561 NGLKPDEHAYAVLTDALCKAGRAEEA---YSFIVRKGVALTKVYYTTLIDGFSKAGNT-D 616
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A +++ E +S ++ +LC+ K ++ A +L +M G + +I
Sbjct: 617 FAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILI 676
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ G A M M S G KP TYT ++ Y G++E+A +++ + ++
Sbjct: 677 DEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVA 736
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
VTY+ LI G + D A L M +PN Y L++ L
Sbjct: 737 PDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHL 784
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 86/230 (37%), Gaps = 17/230 (7%)
Query: 189 EKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKI- 247
E+E V N LI +G AF + C N TY ++ L + +
Sbjct: 731 EREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLA 790
Query: 248 ---------------FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTL 292
D W + E+M++ G P +I+ FCK G+ +EA ++
Sbjct: 791 YVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDH 850
Query: 293 AREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMK 352
K + P + + LI C + + + AL + S + ++ + ++ LC
Sbjct: 851 MCGKGLSPNEDIYTLLIKCCC-DTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEG 909
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
D K+L ++ G + + KAG + +ML +M R
Sbjct: 910 DFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKR 959
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 154/342 (45%), Gaps = 5/342 (1%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
ILN L+ G+ K + +K G +Q +Y + L + A + +
Sbjct: 82 ILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTI 141
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+ + PD II CK EA+ +Y+ + ++P LI C +
Sbjct: 142 EDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQL 201
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
++ A +L++ + I ++++I +LC+ V +K LL+ M +G P +++
Sbjct: 202 ME-AFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSI 260
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
++ Y G++ A ++ +M G+ PDVY+Y +++G G +++EA +L E +
Sbjct: 261 LMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKN 320
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
VTY +LI G CKL L L EM G N+ YN L+ LC K + A
Sbjct: 321 MIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLC-KNQNLDKA 379
Query: 499 EKLLEDMRLKGLHLNGIT-RALIRAVKELEEDAIENGEALVE 539
L M+ +G+ N T ALI + + ++ G+AL +
Sbjct: 380 IALFMKMKERGIQPNKYTYTALIDGL--CKGGRLKKGQALFQ 419
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 169/420 (40%), Gaps = 74/420 (17%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
+++ L+K +C K+ D V G + V +LN L K+G+ + A ++
Sbjct: 82 ILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGL----CKIGETRCAIKL 137
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
D + Y I+ L + K+ D A+ + +M G PD +I FC
Sbjct: 138 LRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCL 197
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET------------------VKL 321
G+ EA + K + P LI +LC+E + V +
Sbjct: 198 AGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVI 257
Query: 322 ALDMLDDFS--GEARK----------YAIKP----FSSVIRSLCRMKDVHGAKTLLSKMI 365
++D + GE +K + P ++ +I LC+ K V A LL +M+
Sbjct: 258 YSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREML 317
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
+ P ++S+I K G +T +++ K M RG ++ TY L+ G ++
Sbjct: 318 HKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLD 377
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCK---LEE------------------------ 458
+A + + K+ + + TY LI G CK L++
Sbjct: 378 KAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMI 437
Query: 459 --------FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
FD AL + ++M+D G PN + +I+SL L+ + AEKLL +M KGL
Sbjct: 438 SGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSL-LEKDENDKAEKLLHEMIAKGL 496
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 1/219 (0%)
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M++TG PD II+ CKG + EA + K M P + LI LC+
Sbjct: 281 MVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGR 340
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
+ LD+ + + + ++S++ LC+ +++ A L KM G P +
Sbjct: 341 ITTI-LDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYT 399
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
++I K G + + + + +G DV+TYT ++SG G +EA + ++ + N
Sbjct: 400 ALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDN 459
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
+ VT+ +IR + +E D A KLL+EM G+ P
Sbjct: 460 GCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 120/252 (47%), Gaps = 5/252 (1%)
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM-Y 299
+L + K + S+ ++M G +PD + +I+ FC G+ A L + K+ Y
Sbjct: 19 SLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQM--AFSFSVLGKILKLGY 76
Query: 300 PPQSVVA-FLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
P +++ L+ LC + E VK +L D + + + ++ LC++ + A
Sbjct: 77 QPNTIILNTLMKGLCLKGE-VKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAI 135
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
LL + P +++++I K + A ++ M +RG+ PDV TYT L+ G+
Sbjct: 136 KLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGF 195
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
GQ+ EA +LNE + + TY+TLI CK + + LL M GV+P+V
Sbjct: 196 CLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDV 255
Query: 479 DEYNKLIQSLCL 490
Y+ L+ CL
Sbjct: 256 VIYSILMDGYCL 267
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 1/179 (0%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
I F ++ SL +MK +L +M ++G P + +I+ + G M + +L
Sbjct: 10 IIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLG 69
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
+ G +P+ LM G G+++++ ++ ++ V+Y L+ G CK+
Sbjct: 70 KILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIG 129
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
E CA+KLL ++D +P+V Y+ +I LC L A L +M +G+ + IT
Sbjct: 130 ETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKL-VDEAYDLYSEMNARGIFPDVIT 187
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 1/173 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
S +I C + + + ++L K++ G P + N+++ G++ ++ +
Sbjct: 48 LSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVV 107
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
++G + D +Y L++G G+ A ++L + +R V Y T+I G CK + D
Sbjct: 108 AQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVD 167
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
A L +EM G+ P+V Y LI CL A A LL +M LK ++ N
Sbjct: 168 EAYDLYSEMNARGIFPDVITYTTLICGFCL-AGQLMEAFGLLNEMILKNINPN 219
>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Cucumis sativus]
Length = 637
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 176/404 (43%), Gaps = 47/404 (11%)
Query: 167 AICSSVGKKEVY----ALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
A+ S+ GK E Y L+D +KE G T +I ++A++ KL K +AA + +
Sbjct: 235 ALISAFGKLERYDFAFRLFDEMKENGLHP----TEKIYTTILAMYFKLNKVEAALRLVEE 290
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
GC TY I+ L + D A+S+ M++ G PD + +I+ + G+
Sbjct: 291 MKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGR 350
Query: 283 ------------------------------------AKEAHVVYTLAREKKMYPPQSVVA 306
A EA + + + + P A
Sbjct: 351 LEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYA 410
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
LI C+ + V+ AL +L++ + + S+I SL R K A L ++
Sbjct: 411 ILIDGFCKTNR-VEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKE 469
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
V+ +I + G ++ A+++ M+ G PDVYTY LMSG G ++E
Sbjct: 470 NCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDE 529
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A ++ ++N +++ ++ G K A+++ +MK+ + P+ YN ++
Sbjct: 530 AHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILS 589
Query: 487 SLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAVKELEED 529
L +A + A KL+ +M+LKG + IT +++ AV +++ED
Sbjct: 590 CLS-RAGMFEMAAKLMREMKLKGFEYDSITYSSILEAVGKVDED 632
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 133/313 (42%), Gaps = 39/313 (12%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYG-CVANQETYYFTIEALSRRKIFDWAWSV 254
T + N LI + G + E++N+ G C + TY I A + + +D+A+ +
Sbjct: 193 TATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRL 252
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
++M E G P + I++ + K K
Sbjct: 253 FDEMKENGLHPTEKIYTTILAMYFKLNK-------------------------------- 280
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
V+ AL ++++ G+ + ++ +I+ L ++ V A +L M+ +G P
Sbjct: 281 ----VEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVV 336
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG-YANGGQMEEACEILNE 433
+ N++I+ +AG + A+++ M S P+V TY ++ + + EA +
Sbjct: 337 LINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEK 396
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
K N S TY LI G+CK + AL LL EM + G P Y LI SL +A
Sbjct: 397 MKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLG-RAK 455
Query: 494 DWRTAEKLLEDMR 506
+ A +L ++++
Sbjct: 456 RYEAANELFQELK 468
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 124/291 (42%), Gaps = 2/291 (0%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
+ TY I L + D W + MI + + +I+ K +A V+
Sbjct: 123 DSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKALSVF 182
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR-KYAIKPFSSVIRSLC 349
+ +K P +V LI L E K+ ++ ++ E +S++I +
Sbjct: 183 YQIKGRKCNPTATVYNTLILMLMHEGHHEKIH-ELYNEICSEGNCSPDTITYSALISAFG 241
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
+++ A L +M G P ++ ++++ Y K + A+ +++ M+ +G P V+
Sbjct: 242 KLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVF 301
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
TYT L+ G G++++A + K+ + V + LI + + ALKL +M
Sbjct: 302 TYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKM 361
Query: 470 KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
+ PNV YN +I+++ A E M+ G+ + T A++
Sbjct: 362 DSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAIL 412
>gi|218190347|gb|EEC72774.1| hypothetical protein OsI_06434 [Oryza sativa Indica Group]
Length = 579
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 148/350 (42%), Gaps = 34/350 (9%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + K G+ F++ GCV N + IEAL + K+ D V KM+E
Sbjct: 204 LIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVEND 263
Query: 263 SLPDS-------------------EKVGKIISWF-------------CKGGKAKEAHVVY 290
P+ +V I S F CK G A EAH V+
Sbjct: 264 CQPNQFTYSITLDILATEGQLHRLNEVLDICSRFMNRSIYSYLVKSLCKSGHASEAHNVF 323
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
+ ++ LC ++T++ A+D+L + + ++ V +L +
Sbjct: 324 CRMWNSHEKGDRDAFVSMLEVLCNAEKTLE-AIDLLHMMPEKGIVTDVGMYNMVFSALGK 382
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+K V L KM + G P +N +IS+Y + G + A E+ ++M + KPDV T
Sbjct: 383 LKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVT 442
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
Y L++ G ++EA + E ++ TY LI + K + + A L +EM
Sbjct: 443 YNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMI 502
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
G PN+ YN L+ L + A KL E M+ +GL + IT +++
Sbjct: 503 SEGCTPNIVTYNILLDCLERRG-KTEEAHKLYETMKQQGLIPDSITYSIL 551
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 112/278 (40%), Gaps = 7/278 (2%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
TY ++A R + + V E+M G D ++ K G +A V+
Sbjct: 130 TYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDM 189
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
++K P LI + T K L D+ + + F+++I +L + K
Sbjct: 190 KQKHCVPDAYTYTILIRMSGKAGRTSKF-LSFFDEMVSKGCVLNLIAFNTIIEALGKNKM 248
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
V +LSKM+ P ++ + + G + E+L + SR + +Y+Y
Sbjct: 249 VDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRLNEVLDIC-SRFMNRSIYSY-- 305
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
L+ G EA + +H + + +++ C E+ A+ LL+ M + G
Sbjct: 306 LVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKG 365
Query: 474 VQPNVDEYNKLIQSLC-LKALDWRTAEKLLEDMRLKGL 510
+ +V YN + +L LK + + L + M+ G+
Sbjct: 366 IVTDVGMYNMVFSALGKLKQVSF--ISNLFDKMKTNGI 401
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 70/172 (40%), Gaps = 2/172 (1%)
Query: 152 FFKWVTSGVVDALL--KAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSK 209
F K T+G++ + + SS G+ + + E+ E V N LI K
Sbjct: 393 FDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGK 452
Query: 210 LGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEK 269
G A +F + + G + TY IE + + A S+ ++MI G P+
Sbjct: 453 HGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVT 512
Query: 270 VGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
++ + GK +EAH +Y +++ + P + L + TV++
Sbjct: 513 YNILLDCLERRGKTEEAHKLYETMKQQGLIPDSITYSILERLESRSQRTVRI 564
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 133/314 (42%), Gaps = 23/314 (7%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI------EALSRRKIFDWA 251
I N LI + + G A+++ K GD GC Y I E L + + A
Sbjct: 370 RIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELA 429
Query: 252 WSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISS 311
+M++ + + V + C GK ++A+ + K P S + +I
Sbjct: 430 EKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGL 489
Query: 312 LCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
LC + V A + ++ + ++ +I S C++ + A+ +M+ +G P
Sbjct: 490 LCNASK-VDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAP 548
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+ ++I AY KA M+ A E+ ++M S G P+V TYT L+ G+ GQ+E+AC+I
Sbjct: 549 NVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIY 608
Query: 432 NEAKKNHS----------------RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
+ N + TY L+ G CK + A LL+ M G +
Sbjct: 609 ARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCE 668
Query: 476 PNVDEYNKLIQSLC 489
PN Y+ LI C
Sbjct: 669 PNHIVYDALIDGFC 682
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 141/319 (44%), Gaps = 22/319 (6%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F K+G + A + F++ GC N TY I A + + A + E M+ G
Sbjct: 521 LIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEG 580
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+P+ +I CK G+ ++A +Y R P D +
Sbjct: 581 CIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIP---------------DVDMYFK 625
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+D G R I + +++ LC+ V A+ LL M EG P + V++++I
Sbjct: 626 ID-----DGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDG 680
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ K G + A + M RG P+VYTY+ L+ +++ A ++L+ +N +
Sbjct: 681 FCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPN 740
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
+ Y +I G CK+ + D A +L++ M++ G PNV Y +I KA +L+
Sbjct: 741 VIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFG-KAGKVDKCLELM 799
Query: 503 EDMRLKGLHLNGIT-RALI 520
M KG N +T R LI
Sbjct: 800 RQMGAKGCAPNFVTYRVLI 818
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 187/417 (44%), Gaps = 33/417 (7%)
Query: 110 LLQSSVDGY---LESSLDSFELDLHEDFVLKVLETPLVLGENL-VCFFKWV--------T 157
+++++ DG+ + L F L+E V+ VL LV L V FF W T
Sbjct: 104 VIRNTGDGFGHKTQKFLRQFREKLNETLVVDVLS--LVKNPELGVKFFIWAGRQIGYGHT 161
Query: 158 SGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAF 217
V ALL+ + G V + ++EI +++K +L ++LN LI + G A
Sbjct: 162 GPVYHALLEVL-GCGGNDRVPEQF--LREIRDEDKEILG-KLLNVLIRKCCRNGLWNVAL 217
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
E + D G ++ TY + D A+ V +M ++G D +G +
Sbjct: 218 EELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLL 277
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVV-AFLISSLCQEDETVKLALDMLDDFSGEARKY 336
CK G+ +EA + EK+ + +V+ +IS LC E + A+D L +
Sbjct: 278 CKAGRWREALALI----EKEEFKLDTVIYTQMISGLC-EASLFEEAMDFLSRMRSSSCIP 332
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ + ++ R + + K +LS MI+EG P +FNS+I AY ++GD + A ++L
Sbjct: 333 NVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLL 392
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK-------NHSRLSPVTYHTL 449
K M G +P Y L+ G G + + ++L A+K H L+ V L
Sbjct: 393 KKMGDCGCQPGYVVYNILIGGIC-GNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNL 451
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
R C +F+ A ++ EM G P+ Y+K+I LC A A L E+M+
Sbjct: 452 ARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLC-NASKVDNAFLLFEEMK 507
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 122/259 (47%), Gaps = 3/259 (1%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
N TY ++ L + A + + M G P+ +I FCK GK EA +V+
Sbjct: 635 NIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVF 694
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
T E+ P + LI L + D+ + LAL +L + + ++ +I LC+
Sbjct: 695 TKMSERGYGPNVYTYSSLIDRLFK-DKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCK 753
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ A L+S M +G P + ++I + KAG + +E+++ M ++G P+ T
Sbjct: 754 VGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVT 813
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
Y L++ G +++A ++L+E K+ + Y +I G+ + EF +L LL+E+
Sbjct: 814 YRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNR--EFIISLGLLDEIA 871
Query: 471 DVGVQPNVDEYNKLIQSLC 489
+ P + Y LI S C
Sbjct: 872 ENVAVPIIPAYRILIDSFC 890
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 130/314 (41%), Gaps = 5/314 (1%)
Query: 181 WDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIE 240
W + EKE+ L I ++I+ + + A + ++ C+ N TY +
Sbjct: 283 WREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLC 342
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP 300
R++ + MI G P +I +C+ G A+ + + P
Sbjct: 343 GCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQP 402
Query: 301 PQSVVAFLISSLCQEDETVKL-ALDMLDDFSGEARKYAIK----PFSSVIRSLCRMKDVH 355
V LI +C ++ L L++ + GE + S++ R LC
Sbjct: 403 GYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFE 462
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
A +++ +M+S+G P + ++ VI A + A + + M+S + PDV+TYT L+
Sbjct: 463 KAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILI 522
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
+ G +++A + +E ++ + VTY LI Y K + A +L M G
Sbjct: 523 DSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCI 582
Query: 476 PNVDEYNKLIQSLC 489
PNV Y LI C
Sbjct: 583 PNVVTYTALIDGHC 596
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 140/341 (41%), Gaps = 10/341 (2%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+ +C + KE L D++ G + + + + LI F K+GK A VF K
Sbjct: 641 ALVDGLCKAHKVKEARDLLDVMSVEGCEPNHI----VYDALIDGFCKVGKLDEAQMVFTK 696
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ G N TY I+ L + K D A V +M+E P+ ++I CK GK
Sbjct: 697 MSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGK 756
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
EA+ + ++ EK +P +I + + K L+++ + +
Sbjct: 757 TDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDK-CLELMRQMGAKGCAPNFVTYR 815
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+I C + A LL +M P A + VI +++ + ++ +L +
Sbjct: 816 VLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNR--EFIISLGLLDEIAEN 873
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK--NHSRLSPVTYHTLIRGYCKLEEFD 460
P + Y L+ + G++E A E+ E ++S Y +LI + D
Sbjct: 874 VAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVD 933
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
A +L +M G P + + L++ L ++ W A +L
Sbjct: 934 KAFELYADMIKRGGIPELSIFFYLVKGL-IRINRWEEALQL 973
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 133/314 (42%), Gaps = 23/314 (7%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI------EALSRRKIFDWA 251
I N LI + + G A+++ K GD GC Y I E L + + A
Sbjct: 370 RIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELA 429
Query: 252 WSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISS 311
+M++ + + V + C GK ++A+ + K P S + +I
Sbjct: 430 EKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGL 489
Query: 312 LCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
LC + V A + ++ + ++ +I S C++ + A+ +M+ +G P
Sbjct: 490 LCNASK-VDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAP 548
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+ ++I AY KA M+ A E+ ++M S G P+V TYT L+ G+ GQ+E+AC+I
Sbjct: 549 NVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIY 608
Query: 432 NEAKKNHS----------------RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
+ N + TY L+ G CK + A LL+ M G +
Sbjct: 609 ARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCE 668
Query: 476 PNVDEYNKLIQSLC 489
PN Y+ LI C
Sbjct: 669 PNHIVYDALIDGFC 682
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 141/319 (44%), Gaps = 22/319 (6%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F K+G + A + F++ GC N TY I A + + A + E M+ G
Sbjct: 521 LIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEG 580
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+P+ +I CK G+ ++A +Y R P D +
Sbjct: 581 CIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIP---------------DVDMYFK 625
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+D G R I + +++ LC+ V A+ LL M EG P + V++++I
Sbjct: 626 ID-----DGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDG 680
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ K G + A + M RG P+VYTY+ L+ +++ A ++L+ +N +
Sbjct: 681 FCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPN 740
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
+ Y +I G CK+ + D A +L++ M++ G PNV Y +I KA +L+
Sbjct: 741 VIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFG-KAGKVDKCLELM 799
Query: 503 EDMRLKGLHLNGIT-RALI 520
M KG N +T R LI
Sbjct: 800 RQMGAKGCAPNFVTYRVLI 818
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 186/417 (44%), Gaps = 33/417 (7%)
Query: 110 LLQSSVDGY---LESSLDSFELDLHEDFVLKVLETPLVLGENL-VCFFKWV--------T 157
+++++ DG+ + L F L+E V+ VL LV L V FF W T
Sbjct: 104 VIRNTGDGFGHKTQKFLRQFREKLNETLVVDVLS--LVKNPELGVKFFIWAGRQIGYGHT 161
Query: 158 SGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAF 217
V ALL+ + G V ++EI +++K +L ++LN LI + G A
Sbjct: 162 GPVYHALLEVL-GCGGNDRVPE--QFLREIRDEDKEILG-KLLNVLIRKCCRNGLWNVAL 217
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
E + D G ++ TY + D A+ V +M ++G D +G +
Sbjct: 218 EELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLL 277
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVV-AFLISSLCQEDETVKLALDMLDDFSGEARKY 336
CK G+ +EA + EK+ + +V+ +IS LC E + A+D L +
Sbjct: 278 CKAGRWREALALI----EKEEFKLDTVIYTQMISGLC-EASLFEEAMDFLSRMRSSSCIP 332
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ + ++ R + + K +LS MI+EG P +FNS+I AY ++GD + A ++L
Sbjct: 333 NVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLL 392
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK-------NHSRLSPVTYHTL 449
K M G +P Y L+ G G + + ++L A+K H L+ V L
Sbjct: 393 KKMGDCGCQPGYVVYNILIGGIC-GNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNL 451
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
R C +F+ A ++ EM G P+ Y+K+I LC A A L E+M+
Sbjct: 452 ARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLC-NASKVDNAFLLFEEMK 507
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 122/259 (47%), Gaps = 3/259 (1%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
N TY ++ L + A + + M G P+ +I FCK GK EA +V+
Sbjct: 635 NIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVF 694
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
T E+ P + LI L + D+ + LAL +L + + ++ +I LC+
Sbjct: 695 TKMSERGYGPNVYTYSSLIDRLFK-DKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCK 753
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ A L+S M +G P + ++I + KAG + +E+++ M ++G P+ T
Sbjct: 754 VGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVT 813
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
Y L++ G +++A ++L+E K+ + Y +I G+ + EF +L LL+E+
Sbjct: 814 YRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNR--EFIISLGLLDEIA 871
Query: 471 DVGVQPNVDEYNKLIQSLC 489
+ P + Y LI S C
Sbjct: 872 ENVAVPIIPAYRILIDSFC 890
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 130/314 (41%), Gaps = 5/314 (1%)
Query: 181 WDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIE 240
W + EKE+ L I ++I+ + + A + ++ C+ N TY +
Sbjct: 283 WREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLC 342
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP 300
R++ + MI G P +I +C+ G A+ + + P
Sbjct: 343 GCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQP 402
Query: 301 PQSVVAFLISSLCQEDETVKL-ALDMLDDFSGEARKYAIK----PFSSVIRSLCRMKDVH 355
V LI +C ++ L L++ + GE + S++ R LC
Sbjct: 403 GYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFE 462
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
A +++ +M+S+G P + ++ VI A + A + + M+S + PDV+TYT L+
Sbjct: 463 KAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILI 522
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
+ G +++A + +E ++ + VTY LI Y K + A +L M G
Sbjct: 523 DSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCI 582
Query: 476 PNVDEYNKLIQSLC 489
PNV Y LI C
Sbjct: 583 PNVVTYTALIDGHC 596
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 140/341 (41%), Gaps = 10/341 (2%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+ +C + KE L D++ G + + + + LI F K+GK A VF K
Sbjct: 641 ALVDGLCKAHKVKEARDLLDVMSVEGCEPNHI----VYDALIDGFCKVGKLDEAQMVFTK 696
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ G N TY I+ L + K D A V +M+E P+ ++I CK GK
Sbjct: 697 MSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGK 756
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
EA+ + ++ EK +P +I + + K L+++ + +
Sbjct: 757 TDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDK-CLELMRQMGAKGCAPNFVTYR 815
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+I C + A LL +M P A + VI +++ + ++ +L +
Sbjct: 816 VLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNR--EFIISLGLLDEIAEN 873
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK--NHSRLSPVTYHTLIRGYCKLEEFD 460
P + Y L+ + G++E A E+ E ++S Y +LI + D
Sbjct: 874 VAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVD 933
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
A +L +M G P + + L++ L ++ W A +L
Sbjct: 934 KAFELYADMIKRGGIPELSIFFYLVKGL-IRINRWEEALQL 973
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 135/290 (46%), Gaps = 2/290 (0%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G N T+ I L A ++ ++M+ G PD G +++ CK G A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
+ + K+ P + +I LC+ + AL++ + + + + +SS+I
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH-MDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
LC A LLS MI P F+++I A+ K G + A ++ M R + P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
+ TY+ L++G+ +++EA ++ H VTY+TLI+G+CK + + +++
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
EM G+ N YN LIQ L +A D A+++ ++M G+ N +T
Sbjct: 420 REMSQRGLVGNTVTYNILIQGL-FQAGDCDMAQEIFKEMVSDGVPPNIMT 468
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 175/415 (42%), Gaps = 14/415 (3%)
Query: 112 QSSVDGYLESSLDSFELDLHEDFVLKVLETPLVLGENLV---CFFKWVTSGVVDALLKAI 168
Q V GY +++ +F +H F+ + L + +V C VT GVV + +
Sbjct: 176 QMFVTGYQPNTV-TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVV---VNGL 231
Query: 169 CSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGC 228
C + L + +++ G+ E GVL I N +I K A +F + G
Sbjct: 232 CKRGDTDLAFNLLNKMEQ-GKLEPGVL---IYNTIIDGLCKYKHMDDALNLFKEMETKGI 287
Query: 229 VANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHV 288
N TY I L + A + MIE PD +I F K GK EA
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 347
Query: 289 VYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSL 348
+Y ++ + P + LI+ C D + A M + + + ++++I+
Sbjct: 348 LYDEMVKRSIDPSIVTYSSLINGFCMHDR-LDEAKQMFEFMVSKHCFPDVVTYNTLIKGF 406
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
C+ K V + +M G +N +I +AGD A E+ K M S G+ P++
Sbjct: 407 CKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 466
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNE 468
TY L+ G G++E+A + +++ + TY+ +I G CK + + L
Sbjct: 467 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN 526
Query: 469 MKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN-GITRALIRA 522
+ GV+P+V YN +I C K A+ L ++M+ G N G LIRA
Sbjct: 527 LSLKGVKPDVVAYNTMISGFCRKG-SKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 144/302 (47%), Gaps = 14/302 (4%)
Query: 233 ETYYFTIEALSRRKI----FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHV 288
+T Y E LSR + D A ++ +M+++ P + K++S K K V
Sbjct: 43 KTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFD---V 99
Query: 289 VYTLARE-KKMYPPQS--VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVI 345
V +L + + + P + + LI+ C+ + + LAL +L + I SS++
Sbjct: 100 VISLGEQMQNLGIPHNHYTYSILINCFCRRSQ-LPLALAVLGKMMKLGYEPNIVTLSSLL 158
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
C K + A L+ +M G P FN++I + AM ++ M ++G +
Sbjct: 159 NGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQ 218
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
PD+ TY +++G G + A +LN+ ++ + Y+T+I G CK + D AL L
Sbjct: 219 PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 278
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRA-V 523
EM+ G++PNV Y+ LI LC W A +LL DM + ++ + T ALI A V
Sbjct: 279 FKEMETKGIRPNVVTYSSLISCLCNYG-RWSDASRLLSDMIERKINPDVFTFSALIDAFV 337
Query: 524 KE 525
KE
Sbjct: 338 KE 339
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 160/381 (41%), Gaps = 45/381 (11%)
Query: 180 LWDIVKEIGE--KEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYF 237
L D V GE K + ++ ++L++ +K+ K + + + G N TY
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 238 TIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG----------------- 280
I RR A +V KM++ G P+ + +++ +C
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 281 ------------------GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
KA EA + K P +++ LC+ +T LA
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT-DLA 240
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++L+ + + ++++I LC+ K + A L +M ++G P ++S+IS
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
G + A +L M R + PDV+T++ L+ + G++ EA ++ +E K S
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
VTY +LI G+C + D A ++ M P+V YN LI+ C ++ E+ +
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC----KYKRVEEGM 416
Query: 503 E---DMRLKGLHLNGITRALI 520
E +M +GL N +T ++
Sbjct: 417 EVFREMSQRGLVGNTVTYNIL 437
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 2/227 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI F K + + EVF + G V N TY I+ L + D A + ++M+
Sbjct: 400 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 459
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ ++ CK GK ++A VV+ + KM P +I +C+ + V+
Sbjct: 460 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK-VE 518
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
D+ + S + K + ++++I CR A L +M +G P + +N++I
Sbjct: 519 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
A + GD + E++K MRS G D T GL++ + G+++++
Sbjct: 579 RARLRDGDREASAELIKEMRSCGFAGDAST-IGLVTNMLHDGRLDKS 624
>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 789
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 143/320 (44%), Gaps = 9/320 (2%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI + L + + A E+ GC ++ +YY + L + K + + EKM++
Sbjct: 305 NSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQ 364
Query: 261 TGSL-PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---D 316
+L PD +I K G A +A A +K + + + ++ S CQ+ D
Sbjct: 365 DSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMD 424
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
E L +DM +S + +++++ CR+ + AK +L +M G P +
Sbjct: 425 EAKSLVIDM---YSRSCNPDVVT-YTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSY 480
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
++++ +G A EM+ + P+ TY +M G+ G++ EAC++ E +
Sbjct: 481 TALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVE 540
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+PV + LI+ C+ ++ A K L E + G NV + +I C + D
Sbjct: 541 KGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFC-QIGDME 599
Query: 497 TAEKLLEDMRLKGLHLNGIT 516
A +LEDM L H + +T
Sbjct: 600 AALSVLEDMYLSNKHPDAVT 619
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 128/275 (46%), Gaps = 4/275 (1%)
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH 287
C + TY ++ R D A + ++M + G P++ +++ C GK+ EA
Sbjct: 438 CNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAR 497
Query: 288 VVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRS 347
+ ++ E+ + P ++ ++ + + + A D+ + + + +I+S
Sbjct: 498 EMINVS-EEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQS 556
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
LC+ + V AK L + +++G F +VI + + GDM A+ +L+ M PD
Sbjct: 557 LCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPD 616
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
TYT L G+++EA E++ + +PVT+ ++I YC+ D L LL+
Sbjct: 617 AVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLD 676
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
M V +P YN +I+ LC + AEKLL
Sbjct: 677 RM--VKRKPFRTIYNHVIEKLC-DFGNLEEAEKLL 708
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 8/191 (4%)
Query: 301 PQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP--FSSVIRSLCRMKDVHGAK 358
P V A L S Q DE V L D +Y+ P + +++ L + K GA+
Sbjct: 163 PSLVCAVLRS---QADERVALNFFYWAD---RQWRYSHHPLVYYTLLDVLSKTKLCQGAR 216
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+L M G F V+ +YS+AG + A+ +L LM+ G++P++ +
Sbjct: 217 RVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTLMQKAGVEPNLSICNTTIYVL 276
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G ++E+A L + + VTY++LI+GYC L + AL+L+ + G P+
Sbjct: 277 VKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDK 336
Query: 479 DEYNKLIQSLC 489
Y ++ LC
Sbjct: 337 VSYYTVMGFLC 347
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 130/329 (39%), Gaps = 35/329 (10%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
F +LG+ A ++ + +GC N +Y + L A + E P+
Sbjct: 452 FCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPN 511
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
+ G ++ F + GK EA + EK +P + LI SLCQ + V+ A L
Sbjct: 512 AITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVE-AKKYL 570
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
++ + + F++VI C++ D+ A ++L M P + ++ A K
Sbjct: 571 EECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKK 630
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ----------------------- 423
G + A E++ M S+GL P T+ ++ Y G+
Sbjct: 631 GRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKRKPFRTIYNH 690
Query: 424 ----------MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
+EEA ++L + + S+L T H L+ K A K+ +M
Sbjct: 691 VIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESCLKKGVALSAYKVACQMFRRN 750
Query: 474 VQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
+ P++ K+ + L L + A+KL+
Sbjct: 751 LTPDLKLCEKVTKKLVLDG-NLVEADKLM 778
>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 582
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 154/321 (47%), Gaps = 8/321 (2%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K+G+ AA ++ + N Y I+ + + K+ + A+ + +M+
Sbjct: 181 LINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKR 240
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD +I FC G+ KEA + + + P + L+ + C+E + VK A
Sbjct: 241 ISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGK-VKEA 299
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
ML + + ++S++ C +K+++ AK + M S G + ++I+
Sbjct: 300 KMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMING 359
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
K + A+ + + MR R + P+V TY L+ G G++ ++++E H R
Sbjct: 360 LCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEM---HDRGQ 416
Query: 443 P---VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
P +TY++++ CK D A+ LL +KD G++P++ Y LI+ LC ++ A+
Sbjct: 417 PPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLC-QSGKLEDAQ 475
Query: 500 KLLEDMRLKGLHLNGITRALI 520
K+ ED+ +KG +L+ T ++
Sbjct: 476 KVFEDLLVKGYNLDVYTYTVM 496
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 139/321 (43%), Gaps = 44/321 (13%)
Query: 225 DYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAK 284
D+ C N Y F I + A + KMI P ++ FCK GK K
Sbjct: 245 DFTC--NSLIYGFCIMGQLKE-----AVGLLHKMILENINPRMYTFSILVDAFCKEGKVK 297
Query: 285 EAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSV 344
EA ++ + +K + L+ C E K A D+ D + ++ ++++
Sbjct: 298 EAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINK-AKDIFDSMASRGVIANVQSYTTM 356
Query: 345 IRSLCRMKDVHGAKTLLSKM------------------------IS-----------EGP 369
I LC++K V A L +M IS G
Sbjct: 357 INGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQ 416
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
PP +NS++ A K + A+ +L ++ +G++PD+YTYT L+ G G++E+A +
Sbjct: 417 PPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQK 476
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + L TY +I+G+C FD AL LL++M+D G PN Y +I SL
Sbjct: 477 VFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLF 536
Query: 490 LKALDWRTAEKLLEDMRLKGL 510
K + AEKLL +M +GL
Sbjct: 537 EKD-ENDMAEKLLREMIARGL 556
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 156/329 (47%), Gaps = 5/329 (1%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N++++ K A + + G V++ T+ I S+ + ++SV K++
Sbjct: 73 FNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKIL 132
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G P++ +I C G +A + + + Q LI+ LC+ +
Sbjct: 133 KKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGR-I 191
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
AL +L G+ + ++ +I ++C+ K V+ A L S+M+++ P + NS+
Sbjct: 192 TAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSL 251
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I + G + A+ +L M + P +YT++ L+ + G+++EA +L K
Sbjct: 252 IYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDI 311
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC-LKALDWRTA 498
L VTY++L+ GYC ++E + A + + M GV NV Y +I LC +K +D A
Sbjct: 312 ILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVD--EA 369
Query: 499 EKLLEDMRLKGLHLNGIT-RALIRAVKEL 526
L E+MR + + N +T +LI + +L
Sbjct: 370 VNLFEEMRCRKIIPNVVTYNSLIDGLGKL 398
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 92/226 (40%), Gaps = 10/226 (4%)
Query: 205 ALFSKLGKGKAAFEVFNKFGDYGC---VANQETYYFTIEALSRRKIFDWAWSVCEKMIET 261
+ + L K K E N F + C + N TY I+ L + + ++M +
Sbjct: 355 TMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDR 414
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
G P+ I+ CK +A + T +++ + P LI LCQ + ++
Sbjct: 415 GQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGK-LED 473
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A + +D + + ++ +I+ C A LLSKM G P + VI
Sbjct: 474 AQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVIL 533
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPD-VYTY-----TGLMSGYANG 421
+ + + A ++L+ M +RGL + Y Y TG+M A G
Sbjct: 534 SLFEKDENDMAEKLLREMIARGLLDEKSYIYLASKETGVMGMGAAG 579
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 69/154 (44%), Gaps = 1/154 (0%)
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
+ P P FN ++S+ KA + A+ + + M G+ D +T+ L++ ++ G
Sbjct: 64 KNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSL 123
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
+ + + K + +T++TLI+G C AL +++ G + Y LI
Sbjct: 124 SFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLIN 183
Query: 487 SLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
LC K A +LL+ + K + N + +I
Sbjct: 184 GLC-KVGRITAALQLLKRVDGKLVQPNAVMYNMI 216
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 141/319 (44%), Gaps = 6/319 (1%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
+ L++ SK+ K ++ + G N T + R A S KMI
Sbjct: 84 FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMI 143
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM-YPPQSVV-AFLISSLCQEDE 317
+ G P G +++ FC+G + +A +Y + M Y P V+ +I LC+ +
Sbjct: 144 KLGHEPSIVTFGSLLNGFCRGDRVYDA--LYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQ 201
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
V ALD+L+ + + ++S+I LC A ++S M P FN
Sbjct: 202 -VDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFN 260
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
++I A K G ++ A E + M R L PD+ TY+ L+ G +++EA E+
Sbjct: 261 ALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSK 320
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
VTY LI GYCK ++ + +KL EM GV N Y LIQ C +A
Sbjct: 321 GCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYC-RAGKLNV 379
Query: 498 AEKLLEDMRLKGLHLNGIT 516
AE++ M G+H N IT
Sbjct: 380 AEEIFRRMVFCGVHPNIIT 398
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 129/284 (45%), Gaps = 6/284 (2%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
+ A+S+ K +D + E+M G + +++ FC+ + A + L + K+
Sbjct: 88 LSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLA--LSFLGKMIKL 145
Query: 299 YPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHG 356
S+V F L++ C+ D AL M D G K + ++++I LC+ K V
Sbjct: 146 GHEPSIVTFGSLLNGFCRGDRVYD-ALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDN 204
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A LL++M +G P +NS+IS +G + A M+ M R + PDV+T+ L+
Sbjct: 205 ALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALID 264
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
G++ EA E E + VTY LI G C D A ++ M G P
Sbjct: 265 ACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFP 324
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
+V Y+ LI C K+ KL +M +G+ N +T ++
Sbjct: 325 DVVTYSILINGYC-KSKKVEHGMKLFCEMSQRGVVRNTVTYTIL 367
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 145/352 (41%), Gaps = 35/352 (9%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
++ L+ F + + A +F++ G N Y I+ L + K D A +
Sbjct: 150 SIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLL 209
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+M + G PD +IS C G+ +A + + ++++YP LI + +E
Sbjct: 210 NRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKE 269
Query: 316 ----------DETVKLALD-----------------MLDD----FSGEARKYA---IKPF 341
+E ++ +LD LD+ F K + +
Sbjct: 270 GRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTY 329
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
S +I C+ K V L +M G + +I Y +AG + A E+ + M
Sbjct: 330 SILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVF 389
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+ P++ TY L+ G + G++E+A IL + +KN VTY+ +IRG CK E
Sbjct: 390 CGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVAD 449
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
A + + G+ P++ Y ++ L K L R A+ L M+ G+ N
Sbjct: 450 AWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLR-READALFRKMKEDGILPN 500
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 97/191 (50%), Gaps = 3/191 (1%)
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+I FS ++ ++ +MK L +M G P N +++ + + ++ A+ L
Sbjct: 80 SIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFL 139
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
M G +P + T+ L++G+ G ++ +A + ++ + + V Y+T+I G CK
Sbjct: 140 GKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKS 199
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++ D AL LLN M+ G+ P+V YN LI LC W A +++ M + ++ + T
Sbjct: 200 KQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSG-RWSDATRMVSCMTKREIYPDVFT 258
Query: 517 -RALIRA-VKE 525
ALI A VKE
Sbjct: 259 FNALIDACVKE 269
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 83/176 (47%), Gaps = 1/176 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+ ++R+ R + + L M+ P P A F+ ++SA SK + + + M+
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G+ ++ T L++ + Q+ A L + K S VT+ +L+ G+C+ +
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
AL + ++M +G +PNV YN +I LC K+ A LL M G+ + +T
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLC-KSKQVDNALDLLNRMEKDGIGPDVVT 223
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 95/244 (38%), Gaps = 39/244 (15%)
Query: 194 VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWS 253
++T +L + ++S+L + + E+F GC + TY I + K +
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAE---EMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMK 347
Query: 254 VCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC 313
+ +M + G + ++ +I +C+ GK A ++ ++P L+ LC
Sbjct: 348 LFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLC 407
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
+ K AL +L D I ++ +IR +C
Sbjct: 408 DNGKIEK-ALVILADMQKNGMDADIVTYNIIIRGMC------------------------ 442
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
KAG++ A ++ + +GL PD++TYT +M G G EA + +
Sbjct: 443 -----------KAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRK 491
Query: 434 AKKN 437
K++
Sbjct: 492 MKED 495
>gi|357148528|ref|XP_003574800.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial-like [Brachypodium distachyon]
Length = 464
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 117/295 (39%), Gaps = 37/295 (12%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A EVFN+ +GC E Y ++AL F A+ + +M G PD ++
Sbjct: 171 AVEVFNRLPHFGCPQTTEVYNALLDALCSNGNFAGAYKLLRRMARKGVAPDRATFSTLVD 230
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
+C GK +EA LDD + +
Sbjct: 231 AWCASGKLREAQA------------------------------------FLDDMASRGFR 254
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
++ ++ L R + AK + EG P A FNS+ A AGD+ A+ +
Sbjct: 255 PPVRGRDLLVDGLVRAGRLEEAKAFAVRFTKEGVLPDVATFNSLAQALCDAGDVKFAVGL 314
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
L SRGL PD+ TY ++ A GQ+EEA + A ++ R P Y +++ CK
Sbjct: 315 LADASSRGLCPDISTYKVMLPAVAKAGQIEEAFRLFYAAVEDGHRPFPSLYAAIVKALCK 374
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
F A +MK G PN Y L++ +C++ + A L +M G
Sbjct: 375 AGRFGDAFAFFGDMKSKGHPPNRPVYVMLVK-MCVRGGRFLDAANYLVEMSEAGF 428
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 10/129 (7%)
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
MR+ GL T++ ++S Y + E+A E+ N + Y+ L+ C
Sbjct: 143 MRALGLPLSPATFSAVISSYGHSRLPEQAVEVFNRLPHFGCPQTTEVYNALLDALCSNGN 202
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG--------- 509
F A KLL M GV P+ ++ L+ + C R A+ L+DM +G
Sbjct: 203 FAGAYKLLRRMARKGVAPDRATFSTLVDAWCASG-KLREAQAFLDDMASRGFRPPVRGRD 261
Query: 510 LHLNGITRA 518
L ++G+ RA
Sbjct: 262 LLVDGLVRA 270
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 72/187 (38%), Gaps = 36/187 (19%)
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKA-------------------------------- 386
T S M + G P A F++VIS+Y +
Sbjct: 138 TQASDMRALGLPLSPATFSAVISSYGHSRLPEQAVEVFNRLPHFGCPQTTEVYNALLDAL 197
Query: 387 ---GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
G+ A ++L+ M +G+ PD T++ L+ + G++ EA L++ R
Sbjct: 198 CSNGNFAGAYKLLRRMARKGVAPDRATFSTLVDAWCASGKLREAQAFLDDMASRGFRPPV 257
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
L+ G + + A GV P+V +N L Q+LC A D + A LL
Sbjct: 258 RGRDLLVDGLVRAGRLEEAKAFAVRFTKEGVLPDVATFNSLAQALC-DAGDVKFAVGLLA 316
Query: 504 DMRLKGL 510
D +GL
Sbjct: 317 DASSRGL 323
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 145/305 (47%), Gaps = 14/305 (4%)
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
VF G N TY I + + + KM + G P+ +I
Sbjct: 193 RVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDAS 252
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS------SLCQEDETVKLALDMLDDFSG 331
CK K KEA +A + M V A LIS LC + ++ +++++ G
Sbjct: 253 CKKKKVKEA-----MALLRAM-AVGGVAANLISYNSVINGLCGKGRMSEVG-ELVEEMRG 305
Query: 332 EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
+ +++++ C+ ++H LLS+M+ +G P + ++I+ KAG+++
Sbjct: 306 KGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSR 365
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
A+E+ MR RGL+P+ TYT L+ G+ G M EA ++L+E + S VTY+ L+
Sbjct: 366 AVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVH 425
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH 511
GYC L A+ +L M + G+ P+V Y+ +I C + + A ++ E+M KG+
Sbjct: 426 GYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFC-RERELGKAFQMKEEMVEKGVL 484
Query: 512 LNGIT 516
+ +T
Sbjct: 485 PDTVT 489
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 158/351 (45%), Gaps = 7/351 (1%)
Query: 175 KEVYALWDIVKEIG-----EKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCV 229
+ V + D+ K +G EKE V N LI K K K A + G
Sbjct: 215 RGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVA 274
Query: 230 ANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVV 289
AN +Y I L + + E+M G +PD +++ FCK G + V+
Sbjct: 275 ANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVL 334
Query: 290 YTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLC 349
+ K + P LI+ +C+ + A+++ D + + ++++I C
Sbjct: 335 LSEMVGKGLSPNVVTYTTLINCMCKAGNLSR-AVEIFDQMRVRGLRPNERTYTTLIDGFC 393
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
+ ++ A +LS+MI G P +N+++ Y G + A+ +L+ M RGL PDV
Sbjct: 394 QKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVV 453
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
+Y+ +++G+ ++ +A ++ E + VTY +LI+G C ++ A L EM
Sbjct: 454 SYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREM 513
Query: 470 KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
G+ P+ Y LI + C+ + A +L ++M +G + +T +++
Sbjct: 514 MRRGLPPDEVTYTSLINAYCVDG-ELSKALRLHDEMVQRGFLPDNVTYSVL 563
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 151/347 (43%), Gaps = 18/347 (5%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA--FEV 219
+ L+ A C KE AL + G + ++N L GKG+ + E+
Sbjct: 246 NTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLC------GKGRMSEVGEL 299
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
+ G V ++ TY + + + +M+ G P+ +I+ CK
Sbjct: 300 VEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCK 359
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDML-DDFSGEARK 335
G A ++ R + + P + LI CQ+ +E K+ +M+ FS
Sbjct: 360 AGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSP---- 415
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
++ +++++ C + V A +L M+ G PP +++VI+ + + ++ A +M
Sbjct: 416 -SVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQM 474
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
+ M +G+ PD TY+ L+ G ++ EA ++ E + VTY +LI YC
Sbjct: 475 KEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCV 534
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
E AL+L +EM G P+ Y+ LI L KA + A++LL
Sbjct: 535 DGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKA-RTKVAKRLL 580
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 157/352 (44%), Gaps = 13/352 (3%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEI-LNELIALFSKLGKGKAAFEVF 220
++++ +C GK + + ++V+E+ + KG++ E+ N L+ F K G +
Sbjct: 281 NSVINGLC---GKGRMSEVGELVEEM--RGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLL 335
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
++ G N TY I + + A + ++M G P+ +I FC+
Sbjct: 336 SEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQK 395
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAI 338
G EA+ V + P SVV + L+ C V+ A+ +L +
Sbjct: 396 GLMNEAYKVLSEMIVSGFSP--SVVTYNALVHGYCFLGR-VQEAVGILRGMVERGLPPDV 452
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
+S+VI CR +++ A + +M+ +G P ++S+I + A ++ +
Sbjct: 453 VSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFRE 512
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M RGL PD TYT L++ Y G++ +A + +E + VTY LI G K
Sbjct: 513 MMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKAR 572
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
A +LL ++ P+ YN LI++ C ++++ E L++ +KGL
Sbjct: 573 TKVAKRLLLKLFYEESVPDDVTYNTLIEN-CSNN-EFKSVEGLVKGFCMKGL 622
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 88/182 (48%), Gaps = 12/182 (6%)
Query: 340 PFSS------VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAY-----SKAGD 388
PFSS V++SL R+ V A TLL G P +N+V+ A S D
Sbjct: 128 PFSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRD 187
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHT 448
A + + M G+ P+VYTY ++ G + G +E+ + + +K + VTY+T
Sbjct: 188 YDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNT 247
Query: 449 LIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLK 508
LI CK ++ A+ LL M GV N+ YN +I LC K E L+E+MR K
Sbjct: 248 LIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGE-LVEEMRGK 306
Query: 509 GL 510
GL
Sbjct: 307 GL 308
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 102/253 (40%), Gaps = 16/253 (6%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
+V N L+ + LG+ + A + + G + +Y I R + A+ +
Sbjct: 416 SVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMK 475
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
E+M+E G LPD+ +I C K EA ++ + + P + LI++ C +
Sbjct: 476 EEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVD 535
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
E K AL + D+ +S +I L + AK LL K+ E P +
Sbjct: 536 GELSK-ALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVT 594
Query: 376 FNSVI---------------SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
+N++I + G M A + K M R KP+ Y ++ G++
Sbjct: 595 YNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSR 654
Query: 421 GGQMEEACEILNE 433
GG + +A + E
Sbjct: 655 GGNVHKAYNLYME 667
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 121/299 (40%), Gaps = 28/299 (9%)
Query: 230 ANQETYYFT-------IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
A ++FT + L R K++ A S+ + T LPD S F
Sbjct: 67 AQAHNFFFTPHCKCLALHILVRFKLYRTAHSLAADLAAT--LPDPTGA----SLF----- 115
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+ H + L + +V ++ SL + K AL +L + + ++
Sbjct: 116 -RHLHDTFHLCSSP--FSSSAVFDLVVKSLSRLGFVPK-ALTLLHLANRHGFAPTVLSYN 171
Query: 343 SVIRSLCR-----MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+V+ +L R +D A+ + M+ G P +N +I GD+ + ++
Sbjct: 172 AVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMR 231
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M G+ P+V TY L+ +++EA +L + ++Y+++I G C
Sbjct: 232 KMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKG 291
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+L+ EM+ G+ P+ YN L+ C K + LL +M KGL N +T
Sbjct: 292 RMSEVGELVEEMRGKGLVPDEVTYNTLVNGFC-KEGNLHQGLVLLSEMVGKGLSPNVVT 349
>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
Length = 789
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 142/317 (44%), Gaps = 8/317 (2%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI ++ K+G A E F D+ C + TY ++ L ++ A +V +M++
Sbjct: 132 LIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLN 191
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETV 319
LP+ +I CK G K+A ++ ++ + P +IS LC+ D+
Sbjct: 192 CLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAY 251
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
+L M D SG + ++++ C + V A +LL +G ++ +
Sbjct: 252 RLFDKMKD--SGVGPDFVT--CNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCL 307
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I +A + + M +KPDVY YT +M G A G++ +A E+LNE ++
Sbjct: 308 IRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGV 367
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
V Y+ LI+G+C + A L E+ PNV Y+ LI +C L R A+
Sbjct: 368 VPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLT-RDAQ 426
Query: 500 KLLEDMRLKGLHLNGIT 516
++ +M G + + +T
Sbjct: 427 EIFNEMEKLGCYPSAVT 443
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 137/344 (39%), Gaps = 28/344 (8%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
++ +C S + Y L+D +K+ G V +LN F L + AF +
Sbjct: 236 VVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNG----FCMLDRVDEAFSLLRL 291
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
F G V + Y I L R K ++ + KMIE PD ++ + GK
Sbjct: 292 FEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGK 351
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ-----EDETVKLALDMLDDFSGEARKYA 337
++A + E + P LI C E +++L + D F
Sbjct: 352 VRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPN------ 405
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA----- 392
+K +S +I +CR A+ + ++M G P FNS+I K G + A
Sbjct: 406 VKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFY 465
Query: 393 -MEM-------LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV 444
ME+ L+L + D + ++ + G + +A IL + +
Sbjct: 466 KMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIY 525
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
TY+ L+ G+CKL F+ A KL EM+ G+ P+ Y LI L
Sbjct: 526 TYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGL 569
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 115/278 (41%), Gaps = 13/278 (4%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
GK + A E+ N+ + G V + Y I+ + A S+ ++ P+ +
Sbjct: 350 GKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTY 409
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDM----- 325
+IS C+ G ++A ++ + YP LI LC+ + K L
Sbjct: 410 SILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEI 469
Query: 326 -------LDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
L G + ++ LC +H A +L ++ G PG +N
Sbjct: 470 GRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNI 529
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+++ + K G+ A ++ + M+ +GL PD TY L++G + E+A ++ ++ +KN
Sbjct: 530 LVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNG 589
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKL-LNEMKDVGVQ 475
Y T++ C+ E A L L ++++ Q
Sbjct: 590 CTPDAAVYRTMMTWMCRRMELPRAFSLWLKYLRNIRSQ 627
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 73/183 (39%)
Query: 308 LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
LI+ L ++L L+ K F +I+ +M A M
Sbjct: 96 LITDLLINQNGLELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDF 155
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
P +N ++ + + A+ + M P+V T++ L+ G G +++A
Sbjct: 156 DCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDA 215
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
+ +E + TY +I G C+ + D A +L ++MKD GV P+ N L+
Sbjct: 216 LHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNG 275
Query: 488 LCL 490
C+
Sbjct: 276 FCM 278
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 71/163 (43%), Gaps = 18/163 (11%)
Query: 158 SGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAF 217
S + +++ +C S + Y + + + G+ G+ T IL + F KLG A+
Sbjct: 489 SASLQKMVEQLCDSGLIHKAYRILMQLADSGDAP-GIYTYNIL---VNGFCKLGNFNGAY 544
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
++F + G + TY I L R + + A+ V ++M + G PD+ +++W
Sbjct: 545 KLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWM 604
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
C+ + A ++ + +L + QEDE +K
Sbjct: 605 CRRMELPRAFSLW--------------LKYLRNIRSQEDEAIK 633
>gi|26449752|dbj|BAC41999.1| unknown protein [Arabidopsis thaliana]
Length = 593
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 164/411 (39%), Gaps = 59/411 (14%)
Query: 154 KWVTSGVV------DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALF 207
K + SGV+ + LL +C + ++ L ++E+G V N LI
Sbjct: 146 KMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCV----SYNTLIKGL 201
Query: 208 SKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD------------------ 249
+ A +FN YG N+ T + AL ++ +
Sbjct: 202 CSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANA 261
Query: 250 ---------------------WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHV 288
A V ++M + DS II C G A+
Sbjct: 262 PLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYG 321
Query: 289 VYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSV 344
++ + P LIS+LC+E + D D G + + P + +
Sbjct: 322 FMCDMVKRGVNPDVFTYNTLISALCKEGK-----FDEACDLHGTMQNGGVAPDQISYKVI 376
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
I+ LC DV+ A L M+ P ++N VI Y + GD + A+ +L LM S G+
Sbjct: 377 IQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGV 436
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
KP+VYT L+ GY GG++ +A + NE + TY+ L+ C L A +
Sbjct: 437 KPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQ 496
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
L +EM G QP++ Y +L++ LC K + AE LL ++ G+ ++ +
Sbjct: 497 LYDEMLRRGCQPDIITYTELVRGLCWKG-RLKKAESLLSRIQATGITIDHV 546
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 120/249 (48%), Gaps = 21/249 (8%)
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE-KKMYPPQSVVAF--LISSL 312
+KMI +G +P +++ CK G ++A L RE ++M P + V++ LI L
Sbjct: 145 KKMIYSGVIPGLITHNHLLNGLCKAGYIEKAD---GLVREMREMGPSPNCVSYNTLIKGL 201
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGA--KTLLSKMI- 365
C + K AL + + + KY I+P + ++ +LC+ K V G K LL +++
Sbjct: 202 CSVNNVDK-ALYLFNTMN----KYGIRPNRVTCNIIVHALCQ-KGVIGNNNKKLLEEILD 255
Query: 366 -SEGPPPGNAVFNSVI-SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
S+ P + V +++ + K G++ A+E+ K M + + D Y ++ G + G
Sbjct: 256 SSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGN 315
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
M A + + K TY+TLI CK +FD A L M++ GV P+ Y
Sbjct: 316 MVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKV 375
Query: 484 LIQSLCLKA 492
+IQ LC+
Sbjct: 376 IIQGLCIHG 384
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 71/132 (53%)
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
++ +S++ G + A+ + K M G+ P + T+ L++G G +E+A ++ E
Sbjct: 122 SIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVRE 181
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
++ + V+Y+TLI+G C + D AL L N M G++PN N ++ +LC K +
Sbjct: 182 MREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGV 241
Query: 494 DWRTAEKLLEDM 505
+KLLE++
Sbjct: 242 IGNNNKKLLEEI 253
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 109/289 (37%), Gaps = 44/289 (15%)
Query: 209 KLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSE 268
K G A EV+ + A+ Y I L A+ M++ G PD
Sbjct: 277 KNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVF 336
Query: 269 KVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDD 328
+IS CK GK EA ++ + + P Q +I LC + ++ ++
Sbjct: 337 TYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGD-----VNRANE 391
Query: 329 FSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
F K ++ P ++ VI R D A ++L+ M+S G P N++I Y
Sbjct: 392 FLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYV 451
Query: 385 KAGDMTPAMEMLKLMRS-----------------------------------RGLKPDVY 409
K G + A + MRS RG +PD+
Sbjct: 452 KGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDII 511
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
TYT L+ G G++++A +L+ + + V + L + Y +L+
Sbjct: 512 TYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQR 560
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%)
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
SS++R LC + A L KMI G PG N +++ KAG + A +++ MR
Sbjct: 125 SSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMRE 184
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
G P+ +Y L+ G + +++A + N K R + VT + ++ C+
Sbjct: 185 MGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQ 238
>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Glycine max]
Length = 827
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 134/313 (42%), Gaps = 36/313 (11%)
Query: 209 KLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSE 268
K G + AF +F++ G V T+ I L + A I+ +P S
Sbjct: 513 KKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSM 572
Query: 269 KVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDD 328
II + K G A VY ++ P LI+ C+ ++ + LAL M DD
Sbjct: 573 TYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNK-MDLALKMHDD 631
Query: 329 FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS---- 384
+ + I ++++I C+M+D+ A SK++ G P V+N +ISAY
Sbjct: 632 MKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNN 691
Query: 385 -------------------------------KAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
K G ++ A+++ M RG+ PD++ Y
Sbjct: 692 MEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNV 751
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
L++G N GQ+E A +IL E N+ + + Y+TLI G+ K A +L +EM D G
Sbjct: 752 LINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKG 811
Query: 474 VQPNVDEYNKLIQ 486
+ P+ Y+ L+
Sbjct: 812 LVPDDTTYDILVN 824
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 148/320 (46%), Gaps = 7/320 (2%)
Query: 169 CSSVGKKE-VYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYG 227
CS +G E L+ +K +G + TV ILN L+ F K + A+ + + + G
Sbjct: 372 CSKIGNVEKANELYTRMKCMGLQP----TVFILNFLLKGFRKQNLLENAYLLLDGAVENG 427
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH 287
+A+ TY + L + A ++ +KMI G P +I CK G +AH
Sbjct: 428 -IASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAH 486
Query: 288 VVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRS 347
V E + P L+ ++ + + A +M D F+S+I
Sbjct: 487 EVMNGIIESGLKPNAITYTILMEGSFKKGDC-EHAFNMFDQMVAAGIVPTDYTFNSIING 545
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
LC++ V A+ L+ I + P + +N +I Y K G + A + + M + P+
Sbjct: 546 LCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPN 605
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
V TYT L++G+ +M+ A ++ ++ K+ L Y TLI G+CK+++ + A K +
Sbjct: 606 VITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFS 665
Query: 468 EMKDVGVQPNVDEYNKLIQS 487
++ +VG+ PN YN +I +
Sbjct: 666 KLLEVGLTPNTIVYNIMISA 685
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 163/381 (42%), Gaps = 22/381 (5%)
Query: 156 VTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKA 215
V V +L+K C L+D V E+G V I + LI SK+G +
Sbjct: 325 VNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTP----NVAIFSVLIEWCSKIGNVEK 380
Query: 216 AFEVFNKFGDYGCVANQETYY---FTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGK 272
A E++ + C+ Q T + F ++ ++ + + A+ + + +E G +
Sbjct: 381 ANELYTRMK---CMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENG-IASVVTYNI 436
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
++ W C+ GK EA ++ K + P +I C+ K +D +
Sbjct: 437 VLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCK-----KGCMDDAHEVMNG 491
Query: 333 ARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD 388
+ +KP ++ ++ + D A + +M++ G P + FNS+I+ K G
Sbjct: 492 IIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGR 551
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHT 448
++ A + L + P TY ++ GY G ++ A + E ++ + +TY +
Sbjct: 552 VSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTS 611
Query: 449 LIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLK 508
LI G+CK + D ALK+ ++MK G++ ++ Y LI C K D A K +
Sbjct: 612 LINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFC-KMQDMENACKFFSKLLEV 670
Query: 509 GLHLNGIT-RALIRAVKELEE 528
GL N I +I A + L
Sbjct: 671 GLTPNTIVYNIMISAYRNLNN 691
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 146/345 (42%), Gaps = 20/345 (5%)
Query: 168 ICSSVGKKEVYALWDIVKEIGEKEKGVLTVEI-LNELIALFSKLGKGKAAFEVFNKFGDY 226
+C E LWD K IG KG+ + N +I K G A EV N +
Sbjct: 441 LCELGKVNEACNLWD--KMIG---KGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIES 495
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G N TY +E ++ + A+++ ++M+ G +P II+ CK G+ EA
Sbjct: 496 GLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEA 555
Query: 287 HVVYTLAREK-KMYPPQSVVAFLISSLCQEDETVKL-ALDMLDDFSGEARKYAIKP---- 340
R+K + QS + ++ C D VK A+D + E + I P
Sbjct: 556 -------RDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVIT 608
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++S+I C+ + A + M +G V+ ++I+ + K DM A + +
Sbjct: 609 YTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLL 668
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
GL P+ Y ++S Y N ME A + E N Y +LI G K +
Sbjct: 669 EVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLS 728
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
AL L +EM G+ P++ YN LI LC A K+L++M
Sbjct: 729 FALDLYSEMLCRGIVPDIFMYNVLINGLCNHG-QLENAGKILKEM 772
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 149/357 (41%), Gaps = 36/357 (10%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
+ N L+ + + K A E F + G V + A+ RR + + A + ++
Sbjct: 153 RVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDE 212
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M E D + ++ KGGK EA + A + + + + +I ++C+ +
Sbjct: 213 MAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSD 272
Query: 318 -----------------------------TVKL-----ALDMLDDFSGEARKYAIKPFSS 343
V+L AL + D+ + +S
Sbjct: 273 LDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATS 332
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
+I+ C DV+ A L +++ G P A+F+ +I SK G++ A E+ M+ G
Sbjct: 333 LIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMG 392
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
L+P V+ L+ G+ +E A +L+ A +N S VTY+ ++ C+L + + A
Sbjct: 393 LQPTVFILNFLLKGFRKQNLLENAYLLLDGAVEN-GIASVVTYNIVLLWLCELGKVNEAC 451
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
L ++M G+ P++ YN +I C K A +++ + GL N IT ++
Sbjct: 452 NLWDKMIGKGITPSLVSYNHMILGHCKKGC-MDDAHEVMNGIIESGLKPNAITYTIL 507
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 129/284 (45%), Gaps = 4/284 (1%)
Query: 206 LFSKLGKGK---AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+ SK+ K K +F+ G + +Y I L R F A SV KM++ G
Sbjct: 16 VLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFG 75
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD V +I+ FC+G + +A + + E P + +I C+ V A
Sbjct: 76 YEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIG-LVNDA 134
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+++ D + + ++S++ LC A L+ M+ P F +VI
Sbjct: 135 VELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDV 194
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ K G + AM++ + M R + PDV+TY L++G G+++EA ++L+
Sbjct: 195 FVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPD 254
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
VTY+TLI G+CK + D KL EM G+ + YN +IQ
Sbjct: 255 VVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQ 298
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 148/351 (42%), Gaps = 11/351 (3%)
Query: 161 VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLT-VEILNELIALFSKLGKGKAAFEV 219
V +L+ C V+ D+V ++ +E G V I N +I K+G A E+
Sbjct: 83 VSSLINGFCQG---NRVFDAIDLVSKM--EEMGFRPDVVIYNTIIDGSCKIGLVNDAVEL 137
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
F++ G A+ TY + L + A + M+ +P+ +I F K
Sbjct: 138 FDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVK 197
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
GK EA +Y + + P LI+ LC V A MLD + +
Sbjct: 198 EGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR-VDEAKQMLDLMVTKGCLPDVV 256
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
++++I C+ K V L +M G +N++I Y +AG A E+ M
Sbjct: 257 TYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM 316
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
SR P++ TY+ L+ G ++E+A + +K+ L TY+ +I G CK+
Sbjct: 317 DSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNV 373
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+ A L + G++P+V Y +I C K W ++ L M+ GL
Sbjct: 374 EDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKR-QWDKSDLLYRKMQEDGL 423
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 122/279 (43%), Gaps = 2/279 (0%)
Query: 238 TIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKK 297
+ +++ K +D S+ M G D +I+ C+ + A V +
Sbjct: 16 VLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFG 75
Query: 298 MYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGA 357
P V+ LI+ CQ + A+D++ + + ++++I C++ V+ A
Sbjct: 76 YEPDVVTVSSLINGFCQGNRVFD-AIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDA 134
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
L +M +G +NS+++ +G + A +++ M R + P+V T+T ++
Sbjct: 135 VELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDV 194
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
+ G+ EA ++ E + TY++LI G C D A ++L+ M G P+
Sbjct: 195 FVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPD 254
Query: 478 VDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
V YN LI C K+ KL +M +GL + IT
Sbjct: 255 VVTYNTLINGFC-KSKRVDEGTKLFREMAQRGLVGDTIT 292
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 126/276 (45%), Gaps = 23/276 (8%)
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP-PQSVVAF--LISSLCQ 314
MI++ LP K++S K K+K +V +L ++ + ++ +I+ LC+
Sbjct: 1 MIQSRPLPSIVDFSKVLS---KIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCR 57
Query: 315 EDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
V +AL ++ G+ K+ +P SS+I C+ V A L+SKM G
Sbjct: 58 CSRFV-IALSVV----GKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFR 112
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P ++N++I K G + A+E+ M G++ D TY L++G G+ +A +
Sbjct: 113 PDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARL 172
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
+ + + +T+ +I + K +F A+KL EM V P+V YN LI LC+
Sbjct: 173 MRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCM 232
Query: 491 --------KALDWRTAEKLLEDMRLKGLHLNGITRA 518
+ LD + L D+ +NG ++
Sbjct: 233 HGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKS 268
>gi|297806463|ref|XP_002871115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316952|gb|EFH47374.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 942
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 152/348 (43%), Gaps = 14/348 (4%)
Query: 178 YALWDIVKEIGEKEKGVLTVEILNE------------LIALFSKLGKGKAAFEVFNKFGD 225
+ + D + +++KG++ + L E LI L++K+GK A EV +
Sbjct: 454 HTMMDGYTMVADEKKGLIVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKE 513
Query: 226 YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKE 285
G N +TY I + K + A++V E M++ G PD II+ FC G
Sbjct: 514 EGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIIAAFCGMGNMDR 573
Query: 286 AHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVI 345
A ++ + P +I+ + + ++ +L++ D + F+++I
Sbjct: 574 AIQTVKEMQKLRHRPTTRTFMPIINGFAKSGD-MRRSLEVFDMMRRCGCVPTVHTFNALI 632
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
L + + A +L +M G + ++ Y+ GD A E +++ GL+
Sbjct: 633 NGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLE 692
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
D++TY L+ G+M+ A + E + + Y+ LI G+ + + A L
Sbjct: 693 VDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADL 752
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
+ +MK GV+P++ Y I S C KA D A + +E+M G+ N
Sbjct: 753 IQQMKKEGVKPDIHTYTSFI-SACSKAGDMNRATQTIEEMEALGVKPN 799
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 93/194 (47%), Gaps = 11/194 (5%)
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSV-----------IRSLCRMKDVHGAK 358
SS QE E + +L + D +G+ + I F + ++ R D+H A+
Sbjct: 271 SSWHQEREGSRKSLQRILDTNGDNWQAVISAFEKINKPSRTEFGLMVKFYGRRGDMHRAR 330
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+M + G P + ++ S+I AY+ DM A+ ++ M+ G++ + TY+ ++ G+
Sbjct: 331 ETFERMRARGITPTSRIYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSVIVGGF 390
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
+ G E A +EAK+ H L+ Y +I +C+ + A L+ EM++ G+ +
Sbjct: 391 SKAGNAEAADHWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPI 450
Query: 479 DEYNKLIQSLCLKA 492
Y+ ++ + A
Sbjct: 451 AIYHTMMDGYTMVA 464
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 83/406 (20%), Positives = 159/406 (39%), Gaps = 48/406 (11%)
Query: 154 KWVTSGVVDALLKAICSSVGKKE--VYALWDIVKEIGEKEKGVLTV-EILNE-------- 202
+WV G DA + S ++E +L I+ G+ + V++ E +N+
Sbjct: 256 RWVQEGEEDAKMSNKSSWHQEREGSRKSLQRILDTNGDNWQAVISAFEKINKPSRTEFGL 315
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
++ + + G A E F + G Y I A + + + A S KM E G
Sbjct: 316 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMEEALSCVRKMKEEG 375
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
I+ F K G A+ A + A+ S+ +I + CQ ++ A
Sbjct: 376 IEMSLVTYSVIVGGFSKAGNAEAADHWFDEAKRIHKTLNASIYGKIIYAHCQTC-NMERA 434
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++ + E I + +++ + D + ++ G P + +I+
Sbjct: 435 EALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVVTYGCLINL 494
Query: 383 YSKAGDMTPAMEMLKLMR-----------------------------------SRGLKPD 407
Y+K G ++ A+E+ ++M+ G+KPD
Sbjct: 495 YTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPD 554
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
V Y +++ + G M+ A + + E +K R + T+ +I G+ K + +L++ +
Sbjct: 555 VILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLEVFD 614
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
M+ G P V +N LI L K A ++L++M L G+ N
Sbjct: 615 MMRRCGCVPTVHTFNALINGLVEKR-QMEKAVEILDEMTLAGVSAN 659
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 108/279 (38%), Gaps = 37/279 (13%)
Query: 184 VKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALS 243
VKE+ +K + T +I F+K G + + EVF+ GCV T+ I L
Sbjct: 578 VKEM-QKLRHRPTTRTFMPIINGFAKSGDMRRSLEVFDMMRRCGCVPTVHTFNALINGLV 636
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS 303
++ + A + ++M G + KI+ + G +A +T + + +
Sbjct: 637 EKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLEVDIF 696
Query: 304 VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSK 363
L+ + C+ ++ AL + + S ++ +I R DV A L+ +
Sbjct: 697 TYEALLKACCKSGR-MQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQ 755
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPA------MEMLKL------------------- 398
M EG P + S ISA SKAGDM A ME L +
Sbjct: 756 MKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASL 815
Query: 399 ----------MRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
M++ GLKPD Y L++ + + EA
Sbjct: 816 PEKALSCYEEMKAVGLKPDKAVYHCLLTSLLSRASIAEA 854
>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 947
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 147/323 (45%), Gaps = 2/323 (0%)
Query: 184 VKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALS 243
VKE EKE + ++E+ N LI K K + ++ ++ G N TY I
Sbjct: 556 VKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWC 615
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS 303
D A++ MIE G P+ KI+S + G+ EA+++ ++
Sbjct: 616 DEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHG 675
Query: 304 VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSK 363
L + ++ K+A D LD+ S ++ I LC+ V AK + S
Sbjct: 676 YFDRLHKADDGNLDSQKIA-DTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSS 734
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
++ G P N + ++I YS AG++ A + M RGL P++ TY L++G G
Sbjct: 735 LLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGN 794
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
++ A ++ ++ + ++Y+ LI GYCK AL L N+M G+ P++ Y+
Sbjct: 795 LDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSA 854
Query: 484 LIQSLCLKALDWRTAEKLLEDMR 506
LI C K D A LL++MR
Sbjct: 855 LIYGFC-KQGDMGKATNLLDEMR 876
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 162/356 (45%), Gaps = 8/356 (2%)
Query: 169 CSSVGKKEVYALWDIVKEIGEKEKGVLTVEI-LNELIALFSKLGKGKAAFEVFNKF-GDY 226
C S+G E + ++K +GE+ G+L ++ L LI + + K + A +V +
Sbjct: 263 CVSIGDMERAEM--VLKLMGER--GILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSE 318
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G V ++ Y I+ R D A + ++M+ G + +I+ +CK G+ EA
Sbjct: 319 GMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEA 378
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
+ + + P + L+ C+E K A+ + ++ + + +S+++
Sbjct: 379 ERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTK-AISVYNEMLRVGIQSNVVTHNSLLK 437
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
LCR+ A + M+ G P + +++ K G+ A+ + + +RG
Sbjct: 438 GLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGR 497
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
Y + +++G+ +M EA E N K+ VTY TLI GYCKL + A K+
Sbjct: 498 STYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVK 557
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRA 522
+M+ + P+++ YN LI L K+ R LL +M LKGL N +T + A
Sbjct: 558 EKMEKEAILPSIELYNSLIGGL-FKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIA 612
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 137/326 (42%), Gaps = 5/326 (1%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
L+ C + L D + +G + + + I N LI + K G+ A + +
Sbjct: 329 VLIDGYCRVCKMDDAVRLRDEMLNVGLR----MNLFICNALINGYCKNGQVSEAERLLMR 384
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
D+ +Y ++ R + A SV +M+ G + ++ C+ G
Sbjct: 385 MVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGA 444
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
++A V+ L ++ + P + L+ L + E + AL + +D + F+
Sbjct: 445 FEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFR-ALALWNDILARGYGRSTYAFN 503
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
++I C+M+ + A+ ++M G P + ++I Y K G++ A ++ + M
Sbjct: 504 TMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKE 563
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
+ P + Y L+ G + E ++L+E + VTY TLI G+C D A
Sbjct: 564 AILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKA 623
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSL 488
+M + G PNV +K++ SL
Sbjct: 624 FTAYFDMIEKGFAPNVIICSKIVSSL 649
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 150/349 (42%), Gaps = 42/349 (12%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+ + ++ ++ + G K A VF+ G GCV + + + +L R+ A V + +
Sbjct: 150 VFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHI 209
Query: 259 IETGSLPDSEKVGKIISWFCKG-----------------------------------GKA 283
G +PD +++ +CK G
Sbjct: 210 NRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDM 269
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKP 340
+ A +V L E+ + + + LI C++ +E K+ +M +YA
Sbjct: 270 ERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYA--- 326
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+ +I CR+ + A L +M++ G + N++I+ Y K G ++ A +L M
Sbjct: 327 YGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMV 386
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
L+P+ Y+Y+ LM G+ G + +A + NE + + + VT+++L++G C++ F+
Sbjct: 387 DWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFE 446
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
AL + + M GV P+ Y L+ L K ++ A L D+ +G
Sbjct: 447 DALHVWHLMLKRGVTPDEVSYCTLLD-LLFKMGEFFRALALWNDILARG 494
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 84/390 (21%), Positives = 149/390 (38%), Gaps = 72/390 (18%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+ ++G + A V++ G ++ +Y ++ L + F A ++ ++
Sbjct: 433 NSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILA 492
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G + +I+ FCK K EA + +E P LI C+ V+
Sbjct: 493 RGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLG-NVE 551
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A + + EA +I+ ++S+I L + K LLS+M +G P + ++I
Sbjct: 552 EAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLI 611
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA------------- 427
+ + G + A M +G P+V + ++S G+++EA
Sbjct: 612 AGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVF 671
Query: 428 ----------------------CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD----- 460
+ L+E+ K+ S + V Y+ I G CK + D
Sbjct: 672 LDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKI 731
Query: 461 ----------------C--------------ALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
C A L +EM G+ PN+ YN LI LC
Sbjct: 732 FSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLC- 790
Query: 491 KALDWRTAEKLLEDMRLKGLHLNGITRALI 520
K+ + A+KL + + LKGL N I+ ++
Sbjct: 791 KSGNLDRAQKLFDKLHLKGLAPNVISYNIL 820
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 123/294 (41%), Gaps = 20/294 (6%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
N ++ + LSR +++D S +++ P ++ W
Sbjct: 93 NVNSHCKLVHILSRARMYDETRSYLNELVT----PSKNNYSSLVVW-------------N 135
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
L R + + V +I + E +K AL + D+ +++ + ++ SL R
Sbjct: 136 ELVRVFEDFKFSPTVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVR 195
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ A + + G P + +++AY K G + A++ +K M G + +V T
Sbjct: 196 KGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVT 255
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM- 469
Y L+ G + G ME A +L + + VT LI+GYC+ + + A K+L EM
Sbjct: 256 YNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREME 315
Query: 470 KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN-GITRALIRA 522
+ G+ + Y LI C + A +L ++M GL +N I ALI
Sbjct: 316 RSEGMVLDEYAYGVLIDGYC-RVCKMDDAVRLRDEMLNVGLRMNLFICNALING 368
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 133/314 (42%), Gaps = 23/314 (7%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI------EALSRRKIFDWA 251
I N LI + + G A+++ K GD GC Y I E L + + A
Sbjct: 370 RIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELA 429
Query: 252 WSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISS 311
+M++ + + V + C GK ++A+ + K P S + +I
Sbjct: 430 EKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGL 489
Query: 312 LCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
LC + V A + ++ + ++ +I S C++ + A+ +M+ +G P
Sbjct: 490 LCNASK-VDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAP 548
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+ ++I AY KA M+ A E+ ++M S G P+V TYT L+ G+ GQ+E+AC+I
Sbjct: 549 NVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIY 608
Query: 432 NEAKKNHS----------------RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
+ N + TY L+ G CK + A LL+ M G +
Sbjct: 609 ARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCE 668
Query: 476 PNVDEYNKLIQSLC 489
PN Y+ LI C
Sbjct: 669 PNHIVYDALIDGFC 682
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 141/319 (44%), Gaps = 22/319 (6%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F K+G + A + F++ GC N TY I A + + A + E M+ G
Sbjct: 521 LIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEG 580
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+P+ +I CK G+ ++A +Y R P D +
Sbjct: 581 CIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIP---------------DVDMYFK 625
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+D G R I + +++ LC+ V A+ LL M EG P + V++++I
Sbjct: 626 ID-----DGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDG 680
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ K G + A + M RG P+VYTY+ L+ +++ A ++L+ +N +
Sbjct: 681 FCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPN 740
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
+ Y +I G CK+ + D A +L++ M++ G PNV Y +I KA +L+
Sbjct: 741 VIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFG-KAGKVDKCLELM 799
Query: 503 EDMRLKGLHLNGIT-RALI 520
M KG N +T R LI
Sbjct: 800 RQMGAKGCAPNFVTYRVLI 818
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 186/417 (44%), Gaps = 33/417 (7%)
Query: 110 LLQSSVDGY---LESSLDSFELDLHEDFVLKVLETPLVLGENL-VCFFKWV--------T 157
+++++ DG+ + L F L+E V+ VL LV L V FF W T
Sbjct: 104 VIRNTGDGFGHKTQKFLRQFREKLNETLVVDVLS--LVKNPELGVKFFIWAGRQIGYGHT 161
Query: 158 SGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAF 217
V ALL+ + G V ++EI +++K +L ++LN LI + G A
Sbjct: 162 GPVYHALLEVL-GCGGNDRVPE--QFLREIRDEDKEILG-KLLNVLIRKCCRNGLWNVAL 217
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
E + D G ++ TY + D A+ V +M ++G D +G +
Sbjct: 218 EELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLL 277
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVV-AFLISSLCQEDETVKLALDMLDDFSGEARKY 336
CK G+ +EA + EK+ + +V+ +IS LC E + A+D L +
Sbjct: 278 CKAGRWREALALI----EKEEFKLDTVIYTQMISGLC-EASLFEEAMDFLSRMRSSSCIP 332
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ + ++ R + + K +LS MI+EG P +FNS+I AY ++GD + A ++L
Sbjct: 333 NVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLL 392
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK-------NHSRLSPVTYHTL 449
K M G +P Y L+ G G + + ++L A+K H L+ V L
Sbjct: 393 KKMGDCGCQPGYVVYNILIGGIC-GNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNL 451
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
R C +F+ A ++ EM G P+ Y+K+I LC A A L E+M+
Sbjct: 452 ARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLC-NASKVDNAFLLFEEMK 507
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 122/259 (47%), Gaps = 3/259 (1%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
N TY ++ L + A + + M G P+ +I FCK GK EA +V+
Sbjct: 635 NIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVF 694
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
T E+ P + LI L + D+ + LAL +L + + ++ +I LC+
Sbjct: 695 TKMSERGYGPNVYTYSSLIDRLFK-DKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCK 753
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ A L+S M +G P + ++I + KAG + +E+++ M ++G P+ T
Sbjct: 754 VGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVT 813
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
Y L++ G +++A ++L+E K+ + Y +I G+ + EF +L LL+E+
Sbjct: 814 YRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNR--EFIISLGLLDEIA 871
Query: 471 DVGVQPNVDEYNKLIQSLC 489
+ P + Y LI S C
Sbjct: 872 ENVAVPIIPAYRILIDSFC 890
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 130/314 (41%), Gaps = 5/314 (1%)
Query: 181 WDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIE 240
W + EKE+ L I ++I+ + + A + ++ C+ N TY +
Sbjct: 283 WREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLC 342
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP 300
R++ + MI G P +I +C+ G A+ + + P
Sbjct: 343 GCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQP 402
Query: 301 PQSVVAFLISSLCQEDETVKL-ALDMLDDFSGEARKYAIK----PFSSVIRSLCRMKDVH 355
V LI +C ++ L L++ + GE + S++ R LC
Sbjct: 403 GYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFE 462
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
A +++ +M+S+G P + ++ VI A + A + + M+S + PDV+TYT L+
Sbjct: 463 KAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILI 522
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
+ G +++A + +E ++ + VTY LI Y K + A +L M G
Sbjct: 523 DSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCI 582
Query: 476 PNVDEYNKLIQSLC 489
PNV Y LI C
Sbjct: 583 PNVVTYTALIDGHC 596
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 134/335 (40%), Gaps = 23/335 (6%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+ +C + KE L D++ G + + + + LI F K+GK A VF K
Sbjct: 641 ALVDGLCKAHKVKEARDLLDVMSVEGCEPNHI----VYDALIDGFCKVGKLDEAQMVFTK 696
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ G N TY I+ L + K D A V +M+E P+ ++I CK GK
Sbjct: 697 MSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGK 756
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
EA+ + ++ EK +P +I + + K L+++ + +
Sbjct: 757 TDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDK-CLELMRQMGAKGCAPNFVTYR 815
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+I C + A LL +M P A + VI +++ + ++ +L +
Sbjct: 816 VLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNR--EFIISLGLLDEIAEN 873
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT---------YHTLIRGY 453
P + Y L+ + G++E A E+ H +S T Y +LI
Sbjct: 874 VAVPIIPAYRILIDSFCKAGRLELALEL-------HKXMSSCTSYSAADKDLYSSLIESL 926
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ D A +L +M G P + + L++ L
Sbjct: 927 SLASKVDKAFELYADMIKRGGIPELSIFFYLVKGL 961
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 185/419 (44%), Gaps = 28/419 (6%)
Query: 109 SLLQSSVDGYLESSLDSFELDLHEDF-------VLKVLETPLVLGENLVCFFKWVTSGVV 161
++ Q +D ++ ++D++ +H V+++LE G C T G
Sbjct: 259 AVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNC----CTYG-- 312
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+LL +C + +E +D + G K +V ++ ++ G ++ N
Sbjct: 313 -SLLNYLCKNGRCREARFFFDSMIGKGIKP----SVTTYGIMLHGYATKGALSEMHDLLN 367
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G N + A ++ I D A + KM + G PD+ G +I CK G
Sbjct: 368 LMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLG 427
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP- 340
+ +A V + + + P V + L+ LC D+ K+ ++ E I P
Sbjct: 428 RVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKV-----EELFFEMLNVGIHPN 482
Query: 341 ---FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
F++++ +LC+ V + L+ + G P +N++I + AG + A ++L+
Sbjct: 483 IVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLE 542
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M S GLKPD ++Y L+ GY G+++ A + N VTY+T++ G + +
Sbjct: 543 GMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTK 602
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
F A +L M + G + ++ YN ++ LC K+ A K+ +++ KGL LN IT
Sbjct: 603 RFSEAKELYLNMINSGTKWDIYTYNIILNGLC-KSNCVDEAIKMFQNLCSKGLQLNIIT 660
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 128/303 (42%), Gaps = 37/303 (12%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ + +F + D G + TY I+ L + ++FD A +V ++MI+ G P+ +
Sbjct: 217 GQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTY 276
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
+I + GK KE + ML++ S
Sbjct: 277 NCLIHGYLSIGKWKEV------------------------------------VRMLEEMS 300
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
K + S++ LC+ A+ MI +G P + ++ Y+ G ++
Sbjct: 301 AGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALS 360
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
++L LM + G+ P+ + + S YA G +++A +I N+ ++ V+Y LI
Sbjct: 361 EMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALI 420
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
CKL D A N+M + GV P++ ++ L+ LC W E+L +M G+
Sbjct: 421 DALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLC-TVDKWEKVEELFFEMLNVGI 479
Query: 511 HLN 513
H N
Sbjct: 480 HPN 482
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 149/343 (43%), Gaps = 3/343 (0%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
I N + ++K G A ++FNK G + +Y I+AL + D A +
Sbjct: 379 HIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQ 438
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
MI G PD ++ C K ++ ++ ++P ++ +LC+E
Sbjct: 439 MINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGR 498
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
++ ++D + + ++++I C + A LL M+S G P + +N
Sbjct: 499 VME-GQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYN 557
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+++ Y KAG + A + M S G+ P V TY ++ G + EA E+ +
Sbjct: 558 TLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINS 617
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
++ TY+ ++ G CK D A+K+ + G+Q N+ +N +I +L LK
Sbjct: 618 GTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGAL-LKGGRKED 676
Query: 498 AEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIENGEALVEA 540
A L + GL N +T L+ +EE ++E ++L A
Sbjct: 677 AMDLFAAIPANGLVQNVVTYRLV-VENLIEEGSLEEFDSLFSA 718
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 111/270 (41%), Gaps = 13/270 (4%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA-HVV 289
N+ TY I R + ++ +++TG D + ++++ C G + EA V+
Sbjct: 93 NRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVL 152
Query: 290 YTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKP----FS 342
E P L+ LC E +E ++L M DD + ++ P +S
Sbjct: 153 LQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADD-----QVWSCPPNVVSYS 207
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+VI V L +M+ G PP + +VI KA A + + M
Sbjct: 208 TVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDN 267
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G+KP++ TY L+ GY + G+ +E +L E + + TY +L+ CK A
Sbjct: 268 GVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREA 327
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
+ M G++P+V Y ++ K
Sbjct: 328 RFFFDSMIGKGIKPSVTTYGIMLHGYATKG 357
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 145/378 (38%), Gaps = 53/378 (14%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ +L +C S E ++ + G + L + N +I K G+ + A ++F
Sbjct: 627 NIILNGLCKSNCVDEAIKMFQNLCSKGLQ----LNIITFNIMIGALLKGGRKEDAMDLFA 682
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G V N TY +E L + S+ M + G+ P+S+ + ++ G
Sbjct: 683 AIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRG 742
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
A + E+ S + LIS FS + +
Sbjct: 743 DISRAGAYLSKLDERNFSVEASTTSMLISI-----------------FSSDEYQ------ 779
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA--YSKAGDMTPAMEMLKLM 399
H AK+L P + N S+ KA + A + + M
Sbjct: 780 -------------HHAKSL---------PKKYRILNEANSSALIKKARRIDDAYSLFREM 817
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
+GL PDV TY ++ G G+ EA E+ + ++++ TY+ ++ G CK
Sbjct: 818 LMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCV 877
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRAL 519
D A K+ + G+Q N+ +N +I +L LK A L + GL + +T L
Sbjct: 878 DEAFKMFQSLCSKGLQLNIITFNIMIGAL-LKGGRKEDAMDLFAAIPANGLVPDVVTYRL 936
Query: 520 IRAVKELEEDAIENGEAL 537
+ A +EE ++E + L
Sbjct: 937 V-AENLIEEGSLEEFDGL 953
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 7/207 (3%)
Query: 248 FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF 307
D A + E M+ G PDS ++ +CK G+ A+ + + P
Sbjct: 534 IDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNT 593
Query: 308 LISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM 364
++ L Q E +L L+M++ K+ I ++ ++ LC+ V A + +
Sbjct: 594 ILHGLFQTKRFSEAKELYLNMIN----SGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNL 649
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
S+G FN +I A K G AM++ + + GL +V TY ++ G +
Sbjct: 650 CSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSL 709
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIR 451
EE + + +KN + + + L+R
Sbjct: 710 EEFDSLFSAMEKNGTAPNSQMLNALVR 736
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 10/176 (5%)
Query: 282 KAKEAHVVYTLARE---KKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARK 335
KA+ Y+L RE K + P ++ L Q E +L L M++ + +
Sbjct: 803 KARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRT----Q 858
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
I ++ ++ LC+ V A + + S+G FN +I A K G AM++
Sbjct: 859 MNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDL 918
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
+ + GL PDV TY + G +EE + +K+ + L + L+R
Sbjct: 919 FAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVR 974
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 129/284 (45%), Gaps = 4/284 (1%)
Query: 206 LFSKLGKGK---AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+ SK+ K K +F+ G + +Y I L R F A SV KM++ G
Sbjct: 75 VLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFG 134
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD V +I+ FC+G + +A + + E P + +I C+ V A
Sbjct: 135 YEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIG-LVNDA 193
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+++ D + + ++S++ LC A L+ M+ P F +VI
Sbjct: 194 VELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDV 253
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ K G + AM++ + M R + PDV+TY L++G G+++EA ++L+
Sbjct: 254 FVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPD 313
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
VTY+TLI G+CK + D KL EM G+ + YN +IQ
Sbjct: 314 VVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQ 357
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 148/351 (42%), Gaps = 11/351 (3%)
Query: 161 VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLT-VEILNELIALFSKLGKGKAAFEV 219
V +L+ C V+ D+V ++ +E G V I N +I K+G A E+
Sbjct: 142 VSSLINGFCQG---NRVFDAIDLVSKM--EEMGFRPDVVIYNTIIDGSCKIGLVNDAVEL 196
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
F++ G A+ TY + L + A + M+ +P+ +I F K
Sbjct: 197 FDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVK 256
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
GK EA +Y + + P LI+ LC V A MLD + +
Sbjct: 257 EGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR-VDEAKQMLDLMVTKGCLPDVV 315
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
++++I C+ K V L +M G +N++I Y +AG A E+ M
Sbjct: 316 TYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM 375
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
SR P++ TY+ L+ G ++E+A + +K+ L TY+ +I G CK+
Sbjct: 376 DSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNV 432
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+ A L + G++P+V Y +I C K W ++ L M+ GL
Sbjct: 433 EDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKR-QWDKSDLLYRKMQEDGL 482
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 125/281 (44%), Gaps = 31/281 (11%)
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKK-------MYPPQSVVAFLI 309
KMI++ LP K++S K K+K +V +L + +Y V I
Sbjct: 59 KMIQSRPLPSIVDFSKVLS---KIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIV----I 111
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMI 365
+ LC+ V +AL ++ G+ K+ +P SS+I C+ V A L+SKM
Sbjct: 112 NCLCRCSRFV-IALSVV----GKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME 166
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
G P ++N++I K G + A+E+ M G++ D TY L++G G+
Sbjct: 167 EMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWS 226
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
+A ++ + + +T+ +I + K +F A+KL EM V P+V YN LI
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286
Query: 486 QSLCL--------KALDWRTAEKLLEDMRLKGLHLNGITRA 518
LC+ + LD + L D+ +NG ++
Sbjct: 287 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKS 327
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 122/279 (43%), Gaps = 2/279 (0%)
Query: 238 TIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKK 297
+ +++ K +D S+ M G D +I+ C+ + A V +
Sbjct: 75 VLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFG 134
Query: 298 MYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGA 357
P V+ LI+ CQ + A+D++ + + ++++I C++ V+ A
Sbjct: 135 YEPDVVTVSSLINGFCQGNRVFD-AIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDA 193
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
L +M +G +NS+++ +G + A +++ M R + P+V T+T ++
Sbjct: 194 VELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDV 253
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
+ G+ EA ++ E + TY++LI G C D A ++L+ M G P+
Sbjct: 254 FVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPD 313
Query: 478 VDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
V YN LI C K+ KL +M +GL + IT
Sbjct: 314 VVTYNTLINGFC-KSKRVDEGTKLFREMAQRGLVGDTIT 351
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 1/157 (0%)
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
L KMI P P F+ V+S +K+ + + + M G+ D+Y+Y +++
Sbjct: 56 LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC 115
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
+ A ++ + K VT +LI G+C+ A+ L+++M+++G +P+V
Sbjct: 116 RCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 175
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
YN +I C L A +L + M G+ + +T
Sbjct: 176 IYNTIIDGSCKIGL-VNDAVELFDRMERDGVRADAVT 211
>gi|255547341|ref|XP_002514728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546332|gb|EEF47834.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 149/332 (44%), Gaps = 10/332 (3%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V+ N L+ K +E++N TY ++A R+ A S+
Sbjct: 151 VQACNALLNGLLKKSSFDIMWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSLIS 210
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M++ G P +I C K EA ++ ++ ++P L+ C+
Sbjct: 211 EMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKT- 269
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
VK AL + + + + F +I +LC+++++ A+ +M G P VF
Sbjct: 270 ANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVF 329
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
NS+I YSKAG+ + A ++L M + PDV+TY+ L+ G +EEA +IL +K
Sbjct: 330 NSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRMEK 389
Query: 437 NHSRLSPVTYHTLIRGYCK-------LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ V Y++LI GYCK LE F A K ++M+ G++P+ Y ++Q
Sbjct: 390 EGVPANSVVYNSLIDGYCKEGNMEKALEIFK-ATKFFSDMRRNGLRPDALAYAVMLQGH- 447
Query: 490 LKALDWRTAEKLLEDMRLKGLHLNGITRALIR 521
L A L DM G+ N +T ++R
Sbjct: 448 LNAKHMADVMMLHADMIKMGIVPNEVTSQVVR 479
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 112/268 (41%), Gaps = 15/268 (5%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
TV I LI K A +F + D G N TY ++ + A +
Sbjct: 220 TVVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLY 279
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+ M++ G P+ G +I CK + A + + + P V LI +
Sbjct: 280 QGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKA 339
Query: 316 DETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
+ A D+L E K+ I P +S +I++ CR+ V A +L +M EG P
Sbjct: 340 GNCSE-ATDLL----LEMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRMEKEGVPA 394
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKL------MRSRGLKPDVYTYTGLMSGYANGGQME 425
+ V+NS+I Y K G+M A+E+ K MR GL+PD Y ++ G+ N M
Sbjct: 395 NSVVYNSLIDGYCKEGNMEKALEIFKATKFFSDMRRNGLRPDALAYAVMLQGHLNAKHMA 454
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGY 453
+ + + K + VT + RGY
Sbjct: 455 DVMMLHADMIKMGIVPNEVTSQVVRRGY 482
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 67/153 (43%), Gaps = 1/153 (0%)
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P N++++ K E+ M SR L P V TY L+ G + A
Sbjct: 146 GAFPAVQACNALLNGLLKKSSFDIMWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRA 205
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
+++E K + V Y TLI G C + A + +MKD GV PN+ YN L+
Sbjct: 206 KSLISEMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDG 265
Query: 488 LCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
C K + + A L + M GL N +T ++
Sbjct: 266 YC-KTANVKQALHLYQGMLDDGLQPNVVTFGIL 297
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+VF +I A+S+ G + E L++ G P V L++G + E+ N
Sbjct: 120 SVFGVLIIAFSEVGLVD---EALRVYLKVGAFPAVQACNALLNGLLKKSSFDIMWELYNN 176
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
+ VTY+ L+ C+ + A L++EM G++P V Y LI LC ++
Sbjct: 177 MVSRRLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLIHGLCSES- 235
Query: 494 DWRTAEKLLEDMRLKGLHLNGIT 516
AE + M+ G+ N T
Sbjct: 236 KLMEAESMFRQMKDSGVFPNLYT 258
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 134/272 (49%), Gaps = 2/272 (0%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
++ L + + A V M E G P ++ FCKGG+ + A + +E+
Sbjct: 209 LKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGC 268
Query: 299 YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
YP + LI+ L ++ E ++ A ++ + + + + ++ +I C+ + A
Sbjct: 269 YPSEVTFNVLINGLSKKGE-LQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEAL 327
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
L +M++ G P A N+++ + K G M+ A + L M + L PD+ +Y L+ G+
Sbjct: 328 ALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGF 387
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G + EA +L+E + + + VTY+TLI G C+L + + ALKL +M + G+ P+V
Sbjct: 388 CRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDV 447
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
Y L+ C K + A++ ++M GL
Sbjct: 448 VTYTVLVNGAC-KLGNMLMAKEFFDEMLHVGL 478
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 153/340 (45%), Gaps = 4/340 (1%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI F +LG AF + ++ N TY I+ L R + A + E MI
Sbjct: 381 NTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMIN 440
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD +++ CK G A + + P Q I + +T K
Sbjct: 441 RGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAK 500
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A + ++ + + ++ + LC++ ++ A LL KMI +G P + + S +
Sbjct: 501 -AFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFM 559
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
A+ + G + E+ M SRG P V TYT L+ +A G+++ A E ++
Sbjct: 560 HAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVV 619
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+ +TY+ LI G+CK+ + D A K EM++ G+ PN Y LI C W+ A +
Sbjct: 620 PNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMG-KWQEALR 678
Query: 501 LLEDMRLKGLHLNGITR-ALIRAV-KELEEDAIENGEALV 538
L M K + + T AL++ + K+ + A++ E+L+
Sbjct: 679 LYAQMLGKRIRPDSCTHGALLKKLDKDYKVQAVQFIESLI 718
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 132/267 (49%), Gaps = 2/267 (0%)
Query: 254 VCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC 313
V EKM+ LPD + +I+ +A VY + E + P + ++ S C
Sbjct: 189 VFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFC 248
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
+ E V+ ALD++ + F+ +I L + ++ AK L+ +M G
Sbjct: 249 KGGE-VQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSP 307
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+N +I Y K G + A+ + + M +RG+ P V ++ +M G+ G+M +A + L++
Sbjct: 308 YTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSD 367
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
K + ++Y+TLI G+C+L A LL+E++ + N+ YN LI LC +
Sbjct: 368 MLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLC-RLG 426
Query: 494 DWRTAEKLLEDMRLKGLHLNGITRALI 520
D TA KL EDM +G+H + +T ++
Sbjct: 427 DLETALKLKEDMINRGIHPDVVTYTVL 453
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 140/312 (44%), Gaps = 6/312 (1%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
TV N ++ F K G+ + A ++ K + GC ++ T+ I LS++ A +
Sbjct: 236 TVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLI 295
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
++M + G +I +CK G EA ++ + + P + ++ C+E
Sbjct: 296 QEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKE 355
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ A L D + I ++++I CR+ ++ A LL ++
Sbjct: 356 GKMSD-ARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVT 414
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N++I + GD+ A+++ + M +RG+ PDV TYT L++G G M A E +E
Sbjct: 415 YNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEML 474
Query: 436 KNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
H L+P Y I G KL + A KL EM G P+V YN + LC K
Sbjct: 475 --HVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLC-KLG 531
Query: 494 DWRTAEKLLEDM 505
+ A +LL+ M
Sbjct: 532 NLEEAGELLQKM 543
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 151/326 (46%), Gaps = 2/326 (0%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
V L+ LI F L F VF K G + + I+ + R + A +
Sbjct: 74 NVCTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLL 133
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
++M G +PD ++ +C GK + ++ L K + P + I+ C+
Sbjct: 134 KEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKV 193
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
E + A+++ D+ S ++++I++LC+ A+ L KM + G P
Sbjct: 194 -EKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILA 252
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+++++ + K G++ + + + M+ R +KPD+ YT +++G ++++A E+L+
Sbjct: 253 YSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLI 312
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+ TY L+ G C+ AL+L +M++ G P YN L+Q CL+ D
Sbjct: 313 VEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQG-CLQHNDT 371
Query: 496 RTAEKLLEDMRLKGLHLNGITRALIR 521
T +L+ +M +G + + +TR ++
Sbjct: 372 STVVQLIHEMADRGFYADAVTRTFLK 397
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 86/176 (48%), Gaps = 1/176 (0%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
KY + S +I C + V ++ K + G P +F ++I + G A
Sbjct: 72 KYNVCTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAG 131
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+LK M G PDV T LM GY + G++++ +I + + +Y I GYC
Sbjct: 132 LLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYC 191
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
K+E+ D A++L +EM GV PN YN LI++LC +AL R A+ L M GL
Sbjct: 192 KVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALC-QALRPRDAQVLFRKMCACGL 246
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 104/210 (49%), Gaps = 14/210 (6%)
Query: 331 GEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
G+ K KP F+++I +CR+ A LL +M G P NS++ Y
Sbjct: 99 GKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQ 158
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
G + ++ LM S+GLKPDVY+Y+ ++GY +++EA E+ +E + VTY
Sbjct: 159 GKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTY 218
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC-------LKALDWRTAE 499
+TLI+ C+ A L +M G+ P++ Y+ L+ C + L
Sbjct: 219 NTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQR 278
Query: 500 KLLE-DMRLKGLHLNGITRALIRAVKELEE 528
+L++ D+ + + +NG+ R+ R VK+ +E
Sbjct: 279 RLVKPDLVVYTIIINGMCRS--RKVKDAKE 306
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 112/253 (44%), Gaps = 5/253 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
++L++ CS +V ++ ++ G K V + I I + K+ K A E+F+
Sbjct: 149 NSLMRGYCSQGKIDKVRKIFHLMVSKGLKPD-VYSYSIF---INGYCKVEKIDEAMELFD 204
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ G V N TY I+AL + A + KM G PD ++ FCK G
Sbjct: 205 EMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQG 264
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
E V++ + + + P V +I+ +C+ VK A ++L E K + +
Sbjct: 265 NLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRS-RKVKDAKEVLSRLIVEGLKPDVHTY 323
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
++++ LCR + A L KM +G PG+ +N ++ + D + ++++ M
Sbjct: 324 TALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMAD 383
Query: 402 RGLKPDVYTYTGL 414
RG D T T L
Sbjct: 384 RGFYADAVTRTFL 396
>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
Length = 472
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 156/367 (42%), Gaps = 20/367 (5%)
Query: 156 VTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKA 215
V + + LLK C + E DI+ + V V N L+ GK
Sbjct: 110 VDAIIASHLLKGFCEAKRTDEA---LDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQ 166
Query: 216 AFEVFNKFGDYGCVANQET--YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
A + + G V + + Y I+ + + A + ++M++ G PD +
Sbjct: 167 ADNLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSV 226
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI---SSLCQEDETVKLALDMLDDFS 330
+ CK +A K++ P LI SS Q E V++ +M
Sbjct: 227 VHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM----- 281
Query: 331 GEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
R+++I P S ++ SLC+ + A+ + M +G P +N +++ Y+
Sbjct: 282 ---RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATK 338
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
G + ++ LM G+ PD YT+ + YAN G +++A I NE + + + VTY
Sbjct: 339 GCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTY 398
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
T+I C++ + D A++ N+M D GV P+ YN LIQ C + +T +
Sbjct: 399 RTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGILLKTQGIDFGNNE 458
Query: 507 LKGLHLN 513
+ LHL+
Sbjct: 459 IMALHLD 465
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 117/262 (44%), Gaps = 4/262 (1%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA-HVVYTL 292
TY ++ +R + A + +++ TG D+ ++ FC+ + EA ++
Sbjct: 79 TYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHR 138
Query: 293 AREKKMYPPQSVVAFLISSLCQEDETVKL--ALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
E P L+ SLC + ++ + L M+ + G + +++VI +
Sbjct: 139 TPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAE-GGTVCSPDVVAYNTVIDGFFK 197
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
DV+ A L +M+ G PP +NSV+ A KA M A L+ M ++ + P+ +T
Sbjct: 198 EGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWT 257
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
Y L+ GY++ GQ +EA + E +++ VT L+ CK + A + + M
Sbjct: 258 YNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMA 317
Query: 471 DVGVQPNVDEYNKLIQSLCLKA 492
G P+V YN ++ K
Sbjct: 318 MKGQNPDVFSYNIMLNGYATKG 339
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
R L P YTY LM + E A + + R+ + L++G+C+ + D
Sbjct: 71 RVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDE 130
Query: 462 ALK-LLNEMKDVGVQPNVDEYNKLIQSLC 489
AL LL+ ++G P+V YN L++SLC
Sbjct: 131 ALDILLHRTPELGCVPDVFSYNILLKSLC 159
>gi|307136214|gb|ADN34051.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 653
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 164/321 (51%), Gaps = 13/321 (4%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I F K+ + ++A V + G +N+ TY I+ +R+ D A+ +C++M+E
Sbjct: 291 NCIINGFCKIRRLESAKNVLAEMIKLGIDSNERTYAPLIDGYARKGSLDVAFRLCDEMVE 350
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC---QEDE 317
T +PD+ +I W G+ +EA + + +++ P + + L LC ++
Sbjct: 351 TRLIPDTVVYNSLIYWLYIEGELEEASFLLSDMINRRILPDEFTYSILTKGLCLSGHLNK 410
Query: 318 TVKLALDMLD-DFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+++ +++ + +A + I +I + + +++ GAK LLS MI G P +
Sbjct: 411 ALRVHYYIVERNLVKDAYTHNI-----LINYMFQSRNIAGAKQLLSSMIVRGIKPDMVTY 465
Query: 377 NSVISAYSKAGDMTPAMEML-KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
++++ + K G + A+++ K +++ G K ++ Y ++ G G ++ A ++++ +
Sbjct: 466 GTLVAGHCKEGKIEAAVQIYDKTVKADG-KSNLVVYNSILDGLCKQGSIDAARLLVDKLQ 524
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+N L VTY+TL+ G+C E + A L EM +VG N+ YN +I LC L
Sbjct: 525 QN-GFLDSVTYNTLLHGFCVNGEVEKAFALFLEMINVGSLVNIVSYNIMINFLCKMGL-I 582
Query: 496 RTAEKLLEDMRLKGLHLNGIT 516
+ A +L+ M +G+ + IT
Sbjct: 583 QQAMELMRAMASQGIVPDLIT 603
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 126/279 (45%), Gaps = 9/279 (3%)
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
D W++ +M+ +G + II CK K EA V L + +++P +VV+F
Sbjct: 196 DKFWNMYMEMVASGYSENVNTFNLIIYALCKECKLLEAISVVYLMLKIEIWP--NVVSFN 253
Query: 309 I-----SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSK 363
+ S + + D +KL + + SG + I ++ +I C+++ + AK +L++
Sbjct: 254 MIIDKASKMGEMDLALKLTRNT-EVISGGSVSPNIVTYNCIINGFCKIRRLESAKNVLAE 312
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
MI G + +I Y++ G + A + M L PD Y L+ G+
Sbjct: 313 MIKLGIDSNERTYAPLIDGYARKGSLDVAFRLCDEMVETRLIPDTVVYNSLIYWLYIEGE 372
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
+EEA +L++ TY L +G C + AL++ + + + + +N
Sbjct: 373 LEEASFLLSDMINRRILPDEFTYSILTKGLCLSGHLNKALRVHYYIVERNLVKDAYTHNI 432
Query: 484 LIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRA 522
LI + ++ + A++LL M ++G+ + +T + A
Sbjct: 433 LINYM-FQSRNIAGAKQLLSSMIVRGIKPDMVTYGTLVA 470
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 98/225 (43%), Gaps = 5/225 (2%)
Query: 195 LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSV 254
T IL + + L L K A V + V + T+ I + + + A +
Sbjct: 393 FTYSILTKGLCLSGHLNK---ALRVHYYIVERNLVKDAYTHNILINYMFQSRNIAGAKQL 449
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
MI G PD G +++ CK GK + A +Y + V ++ LC+
Sbjct: 450 LSSMIVRGIKPDMVTYGTLVAGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGLCK 509
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
+ ++ A ++D ++ +++++ C +V A L +MI+ G
Sbjct: 510 QG-SIDAARLLVDKLQQNGFLDSV-TYNTLLHGFCVNGEVEKAFALFLEMINVGSLVNIV 567
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
+N +I+ K G + AME+++ M S+G+ PD+ TYT L++ +
Sbjct: 568 SYNIMINFLCKMGLIQQAMELMRAMASQGIVPDLITYTTLITNFV 612
>gi|449488446|ref|XP_004158042.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g11710, mitochondrial-like [Cucumis sativus]
Length = 653
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 170/346 (49%), Gaps = 16/346 (4%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I F K+ + ++A V + G N+ TY I+ +R+ D A+ +C++M+E
Sbjct: 291 NCIINGFCKIRRLESAKNVLGEMIKLGIYFNERTYATLIDGYARKGSLDVAFRLCDEMVE 350
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC---QEDE 317
+PD+ +I W G+ +EA + + +++ P + + L LC ++
Sbjct: 351 MRLIPDTFVYNSLIYWLYMEGELEEASFLLSDMINRRILPDEFTYSILTKGLCVSGHLNK 410
Query: 318 TVKLALDMLD-DFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+++ +++ +A Y I +I + + +++ GAK LLS MI G P +
Sbjct: 411 ALRVHYYIVERSLVRDAFTYNI-----LINYMFQSRNIAGAKQLLSSMIVGGIKPDMVTY 465
Query: 377 NSVISAYSKAGDMTPAMEML-KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+ + + K G + A+++ K +++ G K ++ Y ++ G G + A ++++ +
Sbjct: 466 GTPVDGHCKEGKIEAAVQIYDKTVKADG-KSNLVVYNSILDGLCKQGSIYAAKLLVDKLQ 524
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+N L PVTY+TL+ G+C E + A L EM +VG N+ YN +I LC L
Sbjct: 525 QN-GFLDPVTYNTLLHGFCVNGEIEKAFALFLEMINVGSLVNIVSYNIMIHFLCKMGL-I 582
Query: 496 RTAEKLLEDMRLKGLHLNGIT-RALIRAVKEL--EEDAIENGEALV 538
+ A +L+ M +G+ + IT LI E+ +D IE + +V
Sbjct: 583 QQAMELMRAMSSQGIIPDLITYTTLITNFVEICGSKDVIELHDYMV 628
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 118/265 (44%), Gaps = 7/265 (2%)
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF-LISSLCQ 314
++MI +G + II C K EA V L + +++P +VV F +I
Sbjct: 203 KEMIASGYSENVNTFNLIIYALCNECKLLEAIYVVYLMLKIEIWP--NVVTFNMIIDKAN 260
Query: 315 EDETVKLALDMLDD---FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
+ + LAL + + SG + I ++ +I C+++ + AK +L +MI G
Sbjct: 261 KMGEMDLALKLTRNTEVISGGSVSPNIVAYNCIINGFCKIRRLESAKNVLGEMIKLGIYF 320
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+ ++I Y++ G + A + M L PD + Y L+ G++EEA +L
Sbjct: 321 NERTYATLIDGYARKGSLDVAFRLCDEMVEMRLIPDTFVYNSLIYWLYMEGELEEASFLL 380
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
++ TY L +G C + AL++ + + + + YN LI + +
Sbjct: 381 SDMINRRILPDEFTYSILTKGLCVSGHLNKALRVHYYIVERSLVRDAFTYNILINYM-FQ 439
Query: 492 ALDWRTAEKLLEDMRLKGLHLNGIT 516
+ + A++LL M + G+ + +T
Sbjct: 440 SRNIAGAKQLLSSMIVGGIKPDMVT 464
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 110/253 (43%), Gaps = 12/253 (4%)
Query: 257 KMIETGSL-PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
++I GS+ P+ II+ FCK + + A V + +Y + A LI +
Sbjct: 276 EVISGGSVSPNIVAYNCIINGFCKIRRLESAKNVLGEMIKLGIYFNERTYATLIDGYAR- 334
Query: 316 DETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
K +LD+ E + + P ++S+I L ++ A LLS MI+ P
Sbjct: 335 ----KGSLDVAFRLCDEMVEMRLIPDTFVYNSLIYWLYMEGELEEASFLLSDMINRRILP 390
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
++ + +G + A+ + + R L D +TY L++ + A ++L
Sbjct: 391 DEFTYSILTKGLCVSGHLNKALRVHYYIVERSLVRDAFTYNILINYMFQSRNIAGAKQLL 450
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
+ + VTY T + G+CK + + A+++ ++ + N+ YN ++ LC +
Sbjct: 451 SSMIVGGIKPDMVTYGTPVDGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGLCKQ 510
Query: 492 ALDWRTAEKLLED 504
+ A KLL D
Sbjct: 511 GSIY--AAKLLVD 521
>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
Length = 876
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 148/326 (45%), Gaps = 6/326 (1%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
L++ +C + ++ L+ ++K G V LI+ K G+ A +F+
Sbjct: 144 LIQGLCDAKCVRKALVLFLMMKRDGCSPN----VRAFTFLISGLCKSGRVGDARLLFDAM 199
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
G V + TY I S+ + A + E M + G PD +I C K
Sbjct: 200 PQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KT 258
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
+EA + A ++ P LI+ C E AL M + K ++ F
Sbjct: 259 EEAEELLNNAVKEGFTPTVVTFTNLINGYCMA-EKFDDALRMKNKMMSSKCKLDLQVFGK 317
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
+I SL + + AK LL+++ + G P + S+I Y K+G + A+E+LK+M G
Sbjct: 318 LINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDG 377
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
+P+ +TY LM G ++ +A +L + +K+ + +TY TL++G C +FD A
Sbjct: 378 CQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF 437
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLC 489
+L M+ G++P+ Y L +LC
Sbjct: 438 RLFEMMEQNGLKPDEHAYAVLTDALC 463
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 130/297 (43%), Gaps = 17/297 (5%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A + + G + + Y F + +L+R + ++ V ++++ G LPD+ +I
Sbjct: 17 AIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIK 76
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA--LDMLDDFSGEA 333
+CK G AH + L E + P L+ C+ E K M+ +
Sbjct: 77 SYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQR 136
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
+Y+ ++ +I+ LC K V A L M +G P F +IS K+G + A
Sbjct: 137 NEYS---YTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDAR 193
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
+ M G+ P V TY ++ GY+ G+M +A +I +KN TY+TLI G
Sbjct: 194 LLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGL 253
Query: 454 C--KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLK 508
C K EE A +LLN G P V + LI C+ AEK + +R+K
Sbjct: 254 CDQKTEE---AEELLNNAVKEGFTPTVVTFTNLINGYCM-------AEKFDDALRMK 300
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 123/291 (42%), Gaps = 20/291 (6%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I + K GK A EV GC N TY + L + K A ++ KM + G
Sbjct: 353 IIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDG 412
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+P+ ++ C A ++ + + + P + A L +LC+
Sbjct: 413 IIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGR----- 467
Query: 323 LDMLDDFSGEARKYAIKP--------FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
+ EA + ++ ++++I + + A TL+ +MI EG P +
Sbjct: 468 -------AEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSY 520
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
++ ++ A K + A+ +L M RG+K ++ YT L+ G+ + A + NE
Sbjct: 521 TYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEM 580
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
+ + S TY I YCK + A L+ +M+ GV P+V YN LI
Sbjct: 581 TSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILI 631
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 150/360 (41%), Gaps = 27/360 (7%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGV-LTVEILNELIALFSKLGKGKAAFEVFN 221
L A+C + +E Y+ IV+ KGV LT LI FSK G A +
Sbjct: 457 VLTDALCKAGRAEEAYSF--IVR------KGVALTKVYYTTLIDGFSKAGNTDFAATLIE 508
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ D GC + TY + AL ++K + A + ++M G +I + G
Sbjct: 509 RMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREG 568
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
K A +Y P + I+S C+E ++ A D++ E + +
Sbjct: 569 KHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGR-LEDAEDLILKMEREGVAPDVVTY 627
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS-------AYSKAGDMTPAME 394
+ +I M + A + L +M+ P + ++ AY ++ D +
Sbjct: 628 NILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWN 687
Query: 395 MLKL---------MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
+++L M GL P V TY+ L++G+ G++EEAC +L+ +
Sbjct: 688 LIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDI 747
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
Y LI+ C + F+ AL ++ M + G QP ++ Y L+ LC + D+ + L D+
Sbjct: 748 YTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEG-DFEKVKSLFCDL 806
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 140/329 (42%), Gaps = 11/329 (3%)
Query: 195 LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSV 254
L +++ +LI K + K A E+ N+ G V N TY I+ + D A V
Sbjct: 310 LDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEV 369
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
+ M G P++ ++ K K +A + T ++ + P L+ C
Sbjct: 370 LKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCD 429
Query: 315 E---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
E D +L +M++ + ++A ++ + +LC+ A + + + +G
Sbjct: 430 EHDFDNAFRL-FEMMEQNGLKPDEHA---YAVLTDALCKAGRAEEAYSFI---VRKGVAL 482
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+ ++I +SKAG+ A +++ M G PD YTY+ L+ ++ EA IL
Sbjct: 483 TKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPIL 542
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
++ + + Y LI + + D A ++ NEM G +P+ Y I S C K
Sbjct: 543 DQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYC-K 601
Query: 492 ALDWRTAEKLLEDMRLKGLHLNGITRALI 520
AE L+ M +G+ + +T ++
Sbjct: 602 EGRLEDAEDLILKMEREGVAPDVVTYNIL 630
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 116/288 (40%), Gaps = 4/288 (1%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+ K K A + K G + N TY ++ FD A+ + E M +
Sbjct: 386 NSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQ 445
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD + CK G+A+EA Y+ K + + LI + T
Sbjct: 446 NGLKPDEHAYAVLTDALCKAGRAEEA---YSFIVRKGVALTKVYYTTLIDGFSKAGNT-D 501
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A +++ E +S ++ +LC+ K ++ A +L +M G + +I
Sbjct: 502 FAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILI 561
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ G A M M S G KP TYT ++ Y G++E+A +++ + ++
Sbjct: 562 DEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVA 621
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
VTY+ LI G + D A L M +PN Y L++ L
Sbjct: 622 PDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHL 669
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 86/230 (37%), Gaps = 17/230 (7%)
Query: 189 EKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKI- 247
E+E V N LI +G AF + C N TY ++ L + +
Sbjct: 616 EREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLA 675
Query: 248 ---------------FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTL 292
D W + E+M++ G P +I+ FCK G+ +EA ++
Sbjct: 676 YVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDH 735
Query: 293 AREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMK 352
K + P + + LI C + + + AL + S + ++ + ++ LC
Sbjct: 736 MCGKGLSPNEDIYTLLIKCCC-DTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEG 794
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
D K+L ++ G + + KAG + +ML +M R
Sbjct: 795 DFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKR 844
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 147/335 (43%), Gaps = 24/335 (7%)
Query: 189 EKEKGVLTVEILNELIAL--FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRK 246
E ++G L ++ I + F K G + A + FN+ + GC N TY I A + K
Sbjct: 467 EMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK 526
Query: 247 IFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVA 306
+A + E M+ G LP+ +I CK G+ ++A ++ K P
Sbjct: 527 KVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVP------ 580
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
V + DD + + + + +++ C+ V A+ LL M
Sbjct: 581 -----------DVDMYFKQYDD---NSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSM 626
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
EG P V++++I K G + A E+ M G +YTY+ L+ Y + +
Sbjct: 627 EGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDL 686
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A ++L++ +N + V Y +I G CK+ + D A KL+ M++ G QPNV Y +I
Sbjct: 687 ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 746
Query: 487 SLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALI 520
+ T +LLE M KG+ N +T R LI
Sbjct: 747 GFGMIG-KIETCLELLERMGSKGVAPNYVTYRVLI 780
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 129/305 (42%), Gaps = 23/305 (7%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + K K A E+F GC+ N TY I+ + + A + E+M +
Sbjct: 518 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 577
Query: 263 SLPD-----------SEK-----VGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVA 306
+PD SE+ G ++ FCK + +EA + + P Q V
Sbjct: 578 DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 637
Query: 307 FLISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSK 363
LI LC+ DE ++ +M S + +SS+I ++K A +LSK
Sbjct: 638 ALIDGLCKVGKLDEAQEVKTEM----SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSK 693
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
M+ P ++ +I K G A +++++M +G +P+V TYT ++ G+ G+
Sbjct: 694 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK 753
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
+E E+L + VTY LI CK D A LL EMK + Y K
Sbjct: 754 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRK 813
Query: 484 LIQSL 488
+I+
Sbjct: 814 VIEGF 818
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 134/330 (40%), Gaps = 6/330 (1%)
Query: 181 WDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIE 240
W + E E V +LI+ + + A + N+ C+ N TY +
Sbjct: 245 WREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLC 304
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP 300
+K V M+ G P + ++ +C G A+ + + P
Sbjct: 305 GCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMP 364
Query: 301 PQSVVAFLISSLCQEDETVKL-ALDMLDDFSGEARKYAIK----PFSSVIRSLCRMKDVH 355
V LI S+C + +++ LD+ + E + SS R LC
Sbjct: 365 GYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYE 424
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
A +++ +MI +G P + ++ V++ A M A + + M+ GL DVYTYT ++
Sbjct: 425 KAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMV 484
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
+ G +E+A + NE ++ + VTY LI Y K ++ A +L M G
Sbjct: 485 DSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCL 544
Query: 476 PNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
PN+ Y+ LI C KA A ++ E M
Sbjct: 545 PNIVTYSALIDGHC-KAGQVEKACQIFERM 573
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 136/335 (40%), Gaps = 12/335 (3%)
Query: 156 VTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKA 215
VT G ALL C S +E L D + G + + + + LI K+GK
Sbjct: 599 VTYG---ALLDGFCKSHRVEEARKLLDAMSMEGCEPNQI----VYDALIDGLCKVGKLDE 651
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A EV + ++G A TY I+ + K D A V KM+E P+ ++I
Sbjct: 652 AQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMID 711
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
CK GK EA+ + + EK P +I + ++ L++L+ +
Sbjct: 712 GLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK-IETCLELLERMGSKGVA 770
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+ +I C+ + A LL +M P A + VI ++K + ++ +
Sbjct: 771 PNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGL 828
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV--TYHTLIRGY 453
L + P + Y L+ ++E A +L E + L TY++LI
Sbjct: 829 LDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESL 888
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
C + + A +L +EM GV P + + LI+ L
Sbjct: 889 CLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGL 923
Score = 42.0 bits (97), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
E L + + + + + L+R +C+ F AL+ L +KD +P+ YN LIQ+
Sbjct: 145 EFLQQIRDDDKEVFGQFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAF 204
Query: 489 CLKALDWRTAEKLLEDMRLKGLHLNGIT 516
LKA +A + +M L L ++G T
Sbjct: 205 -LKADRLDSASLIHREMSLANLRMDGFT 231
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 73/182 (40%), Gaps = 4/182 (2%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
K+ +++++ + R D + L ++ + N ++ + + G + A+E
Sbjct: 121 KHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGQFLNVLVRKHCRNGSFSIALE 180
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
L ++ +P TY L+ + +++ A I E + R+ T C
Sbjct: 181 ELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLC 240
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG 514
K+ ++ AL L+ V P+ Y KLI LC +L + A L MR N
Sbjct: 241 KVGKWREALTLVETENFV---PDTVFYTKLISGLCEASL-FEEAMDFLNRMRATSCLPNV 296
Query: 515 IT 516
+T
Sbjct: 297 VT 298
>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 135/281 (48%), Gaps = 8/281 (2%)
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG----KAKEAHVVYTLAREK 296
+L + K + S+ +KM G P+ +I FC+ G + +A + +
Sbjct: 95 SLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVAL 154
Query: 297 KMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHG 356
+ Q LI LC+ ET + ALD+L G+ + +++VI +C+ K V+
Sbjct: 155 GFHLDQVSYGTLIHGLCKVGET-RAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVND 213
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A L S+M+S+G P ++++IS + G + A+++ + +KPD YT+ L+
Sbjct: 214 AFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVD 273
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
G+ +M+E + K VTY++L+ GYC ++E + A + N M GV P
Sbjct: 274 GFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNP 333
Query: 477 NVDEYNKLIQSLC-LKALDWRTAEKLLEDMRLKGLHLNGIT 516
++ YN LI C +K +D A L +M K + N +T
Sbjct: 334 DIRSYNILINGFCKIKKVD--KAMNLFNEMHCKNIIPNVVT 372
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 157/368 (42%), Gaps = 26/368 (7%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
L+ +C VG E A D+++ + K L + N +I K AF+++++
Sbjct: 165 TLIHGLCK-VG--ETRAALDLLQRVDGKLVQ-LNAVMYNTVIYGMCKDKHVNDAFDLYSE 220
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G N TY I A + K+I PD ++ FCK K
Sbjct: 221 MVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRK 280
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
KE V+ + ++ + P L+ C E V A + + + I+ ++
Sbjct: 281 MKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKE-VNTAKSIFNTMAQGGVNPDIRSYN 339
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+I C++K V A L ++M + P +NS+I SK+G ++ A++++ M R
Sbjct: 340 ILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDR 399
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC- 461
G+ P++ TY ++ Q+++A ++ + K + S TY LI G CK+E +D
Sbjct: 400 GVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVEGYDIT 459
Query: 462 -------------------ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
AL LL++MKD PN Y I+SL L + AEKL
Sbjct: 460 VNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSL-LDNNENDKAEKLF 518
Query: 503 EDMRLKGL 510
+M +GL
Sbjct: 519 REMITRGL 526
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 134/296 (45%), Gaps = 13/296 (4%)
Query: 201 NELIALFSKLG----KGKAAFEVFNKFGDYGCVANQETYYFTIEALSR----RKIFDWAW 252
N LI F +LG + AF +K G +Q +Y I L + R D
Sbjct: 125 NILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQ 184
Query: 253 SVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSL 312
V K+++ ++ +I CK +A +Y+ K + P + LIS
Sbjct: 185 RVDGKLVQLNAV----MYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGF 240
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
+ +K A+D+ + E K F+ ++ C+ + + KT+ + M+ +G P
Sbjct: 241 FVVGK-LKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPD 299
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+NS++ Y ++ A + M G+ PD+ +Y L++G+ ++++A + N
Sbjct: 300 VVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFN 359
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
E + + VTY++LI G K AL+L+++M D GV PN+ YN +I +L
Sbjct: 360 EMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDAL 415
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 12/188 (6%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+SS + DV A +L ++++ + P P FN ++ + K+ + + + M
Sbjct: 54 YSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKME 113
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYH-------TLIRGY 453
RG+KP+++ L+ + G + C+I ++A H +L + +H TLI G
Sbjct: 114 FRGIKPNLFNCNILIYCFCQLGLI--PCQI-HQAFLFHDKLVALGFHLDQVSYGTLIHGL 170
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
CK+ E AL LL + VQ N YN +I +C K A L +M KG+ N
Sbjct: 171 CKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMC-KDKHVNDAFDLYSEMVSKGISPN 229
Query: 514 GIT-RALI 520
+T ALI
Sbjct: 230 VVTYSALI 237
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 145/323 (44%), Gaps = 11/323 (3%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
TV+I N ++ + + +++ G N TY ++AL + D A +
Sbjct: 145 TVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLL 204
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM--YPPQSVVAFLISSLC 313
+M G PD +IS CK GK KE ARE M P V LI+ +C
Sbjct: 205 VEMSSKGCDPDEVSYTTLISSLCKLGKVKE-------ARELAMSFTPSVPVYNALINGVC 257
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
+E T + A +LD+ + + ++++I +L +V + +L+KM + G P
Sbjct: 258 KE-YTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNL 316
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
F S+I + G A++ M G+ P+V Y LM G + + +A + N+
Sbjct: 317 HTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQ 376
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
+ N + TY LI GY K + D A ++ N M G PNV Y ++ LC ++
Sbjct: 377 MEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSM 436
Query: 494 DWRTAEKLLEDMRLKGLHLNGIT 516
+ A L+E+M+++ N +T
Sbjct: 437 -FNQAYCLIENMQVENCPPNTVT 458
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 143/318 (44%), Gaps = 7/318 (2%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI+ KLGK K A E+ F + Y I + + F+ A+ + ++M+ G
Sbjct: 222 LISSLCKLGKVKEARELAMSF-----TPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKG 276
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P+ II+ G + + V + P LI + + + A
Sbjct: 277 IDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHE-A 335
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
LD D E + +++++ LC + + A ++ ++M G P ++++I
Sbjct: 336 LDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDG 395
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y+KAGD+ A E+ M + G P+V YT ++ +A ++ + + +
Sbjct: 396 YAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPN 455
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
VT++T I+G C D A+K+ ++M + G PN YN+L+ SL LK + A L+
Sbjct: 456 TVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSL-LKDRRFGEAFGLV 514
Query: 503 EDMRLKGLHLNGITRALI 520
+DM +G+ LN +T I
Sbjct: 515 KDMEHRGIELNLVTYNTI 532
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 140/311 (45%), Gaps = 7/311 (2%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I + + G + A + F + D+ + Y ++AL F + M + G
Sbjct: 117 VIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDG 176
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P+ ++ CK + AH + K P + LISSLC+ + VK A
Sbjct: 177 MEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGK-VKEA 235
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++ F+ ++ ++++I +C+ A LL +M+++G P + ++I+A
Sbjct: 236 RELAMSFTP-----SVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINA 290
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
S AG++ ++ +L M +RG P+++T+T L+ G+ G EA + + + +
Sbjct: 291 LSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPN 350
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
V Y+ L+ G C A+ + N+M+ G PNV Y+ LI KA D A ++
Sbjct: 351 VVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYA-KAGDLDGASEVW 409
Query: 503 EDMRLKGLHLN 513
M G H N
Sbjct: 410 NWMITHGCHPN 420
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 129/327 (39%), Gaps = 7/327 (2%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELI-ALFSKLGKGKAAFEVFN 221
+L+K G E WD + +E V V N L+ L SK G A VFN
Sbjct: 321 SLIKGFFLKGGSHEALDFWDRMI----REGVVPNVVAYNALMHGLCSKRSLGDAV-SVFN 375
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ GC N TY I+ ++ D A V MI G P+ ++ C+
Sbjct: 376 QMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNS 435
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+A+ + + + P I LC V A+ + D +
Sbjct: 436 MFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGR-VDWAIKVFDQMGNSGCFPNTTTY 494
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+ ++ SL + + A L+ M G +N++I Y AG + A+E+L M
Sbjct: 495 NELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVV 554
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
RG KPD T ++ Y G++ A ++++ + Y +LI G C +
Sbjct: 555 RGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEE 614
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSL 488
A+ L M G+ PNV +N L++ L
Sbjct: 615 AIVYLRRMLSEGISPNVATWNVLVRHL 641
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 121/294 (41%), Gaps = 1/294 (0%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
+ LI F G A + +++ G V N Y + L ++ A SV
Sbjct: 315 NLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVF 374
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+M G P+ +I + K G A V+ +P ++ LC+
Sbjct: 375 NQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCR- 433
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ A ++++ E F++ I+ LC V A + +M + G P
Sbjct: 434 NSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTT 493
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N ++ + K A ++K M RG++ ++ TY ++ GY G + EA E+L +
Sbjct: 494 YNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMV 553
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
++ +T + +I YCK + + A++L++ + P++ Y LI +C
Sbjct: 554 VRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGIC 607
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 107/255 (41%), Gaps = 41/255 (16%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
TY IE L+ + D + ++M G + +I + + G +++A +
Sbjct: 78 TYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRM 137
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
++ ++ P TVK+ +LD E R I P
Sbjct: 138 QDFRVKP-----------------TVKIYNHILDALLDENRFQMINP------------- 167
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
+ S M +G P +N ++ A K + A ++L M S+G PD +YT
Sbjct: 168 ------IYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTT 221
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
L+S G+++EA E + + PV Y+ LI G CK F+ A +LL+EM + G
Sbjct: 222 LISSLCKLGKVKEA----RELAMSFTPSVPV-YNALINGVCKEYTFEEAFQLLDEMMNKG 276
Query: 474 VQPNVDEYNKLIQSL 488
+ PNV Y +I +L
Sbjct: 277 IDPNVISYTTIINAL 291
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 1/177 (0%)
Query: 314 QEDETVKLALDMLDDFSG-EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
+ + + LAL+ + ++ K+ + +I L +++ + LL +M EG
Sbjct: 51 KHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCS 110
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+F SVI +Y +AG A++ M+ +KP V Y ++ + + + I +
Sbjct: 111 EDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYS 170
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
KK+ + TY+ L++ CK D A KLL EM G P+ Y LI SLC
Sbjct: 171 NMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLC 227
>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 117/431 (27%), Positives = 204/431 (47%), Gaps = 26/431 (6%)
Query: 100 DGDKLENVLSLLQSSVDGYLESSLDSFELDLHEDFVLKVLETPL--VLGENLV----CFF 153
DGD ++ +L +S + Y +S DL +V TP+ VL NLV F
Sbjct: 104 DGDVFWVLIHILVTSPETYGRAS------DLLIRYVSTSNPTPMASVLVSNLVDSAKLFG 157
Query: 154 KWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLT-VEILNELIALFSKLGK 212
V S + LL A S ++ YA+ DIV ++ E GV+ V +N ++ +
Sbjct: 158 FEVNSRAFNYLLNAY--SKDRQTDYAV-DIVNQM--LELGVIPFVPYVNRTLSALVQRNS 212
Query: 213 GKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGK 272
A E++++ G + T + A R + A V + IE G+ PDS
Sbjct: 213 ITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSL 272
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPP--QSVVAFLISSLCQEDETVKLALDMLDDFS 330
+ CK A+ + +EKK+ P ++ + +++S+ Q + ++ A+ D+
Sbjct: 273 AVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGN--MEDAIRWKDEMV 330
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
+ + +S+I C+ D+ A L KM +EGP P + F+ +I +SK G+M
Sbjct: 331 SDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEME 390
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV-TYHTL 449
A+E K M S GL P V+ ++ G+ G + EEA ++ +E+ + + L+ V +T+
Sbjct: 391 KALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFE--TGLANVFICNTI 448
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
+ CK + D A +LL +M+ G+ PNV YN ++ + C K + A + +M KG
Sbjct: 449 LSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKK-NMDLARTVFSNMLEKG 507
Query: 510 LHLNGITRALI 520
L N T +++
Sbjct: 508 LKPNNYTYSIL 518
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 130/304 (42%), Gaps = 3/304 (0%)
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDS-EKVGK 272
+ EV N+ N Y I L + A + MIE S
Sbjct: 529 QNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNS 588
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
II F K G+ A Y + P L+ LC+ + + AL+M D+ +
Sbjct: 589 IIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNR-MDQALEMRDEMKNK 647
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
K I + ++I C+ ++ A L S+++ EG P V+NS+IS + G+M A
Sbjct: 648 GVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAA 707
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
+++ K M GL+ D+ TYT L+ G G + A ++ E + + Y ++ G
Sbjct: 708 LDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNG 767
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
K +F +K+ EMK V PNV YN +I + + A +L ++M KG+
Sbjct: 768 LSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREG-NLDEAFRLHDEMLDKGILP 826
Query: 513 NGIT 516
+G T
Sbjct: 827 DGAT 830
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 132/335 (39%), Gaps = 74/335 (22%)
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
+A ++F K + G N T+ IE S+ + A +KM G P V II
Sbjct: 356 SALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTII 415
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR 334
+ KG K +EA ++ DE+ + +G A
Sbjct: 416 QGWLKGQKHEEALKLF-------------------------DESFE---------TGLAN 441
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
+ ++++ LC+ + A LL KM S G P +N+V+ A+ + +M A
Sbjct: 442 VFIC---NTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLART 498
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+ M +GLKP+ YTY+ L+ G + E++N+ ++ ++ V Y T+I G C
Sbjct: 499 VFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLC 558
Query: 455 KL------------------------------------EEFDCALKLLNEMKDVGVQPNV 478
K+ E D A+ EM G+ PNV
Sbjct: 559 KVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNV 618
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
Y L+ LC K A ++ ++M+ KG+ L+
Sbjct: 619 ITYTSLMDGLC-KNNRMDQALEMRDEMKNKGVKLD 652
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 108/252 (42%), Gaps = 1/252 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I F K G+ A + + G N TY ++ L + D A + ++M
Sbjct: 587 NSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKN 646
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G D G +I FCK + A +++ E+ + P Q V LIS V
Sbjct: 647 KGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVA 706
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
ALD+ + + + ++++I L + ++ A L ++M + G P ++ ++
Sbjct: 707 -ALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIV 765
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ SK G ++M + M+ + P+V Y +++G+ G ++EA + +E
Sbjct: 766 NGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGIL 825
Query: 441 LSPVTYHTLIRG 452
T+ L+ G
Sbjct: 826 PDGATFDILVSG 837
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 147/335 (43%), Gaps = 24/335 (7%)
Query: 189 EKEKGVLTVEILNELIAL--FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRK 246
E ++G L ++ I + F K G + A + FN+ + GC N TY I A + K
Sbjct: 508 EMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK 567
Query: 247 IFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVA 306
+A + E M+ G LP+ +I CK G+ ++A ++ K P
Sbjct: 568 KVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVP------ 621
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
V + DD + + + + +++ C+ V A+ LL M
Sbjct: 622 -----------DVDMYFKQYDD---NSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSM 667
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
EG P V++++I K G + A E+ M G +YTY+ L+ Y + +
Sbjct: 668 EGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDL 727
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A ++L++ +N + V Y +I G CK+ + D A KL+ M++ G QPNV Y +I
Sbjct: 728 ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 787
Query: 487 SLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALI 520
+ T +LLE M KG+ N +T R LI
Sbjct: 788 GFGMIG-KIETCLELLERMGSKGVAPNYVTYRVLI 821
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 129/305 (42%), Gaps = 23/305 (7%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + K K A E+F GC+ N TY I+ + + A + E+M +
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 618
Query: 263 SLPD-----------SEK-----VGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVA 306
+PD SE+ G ++ FCK + +EA + + P Q V
Sbjct: 619 DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 678
Query: 307 FLISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSK 363
LI LC+ DE ++ +M S + +SS+I ++K A +LSK
Sbjct: 679 ALIDGLCKVGKLDEAQEVKTEM----SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSK 734
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
M+ P ++ +I K G A +++++M +G +P+V TYT ++ G+ G+
Sbjct: 735 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK 794
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
+E E+L + VTY LI CK D A LL EMK + Y K
Sbjct: 795 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRK 854
Query: 484 LIQSL 488
+I+
Sbjct: 855 VIEGF 859
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 134/330 (40%), Gaps = 6/330 (1%)
Query: 181 WDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIE 240
W + E E V +LI+ + + A + N+ C+ N TY +
Sbjct: 286 WREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLC 345
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP 300
+K V M+ G P + ++ +C G A+ + + P
Sbjct: 346 GCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMP 405
Query: 301 PQSVVAFLISSLCQEDETVKL-ALDMLDDFSGEARKYAIK----PFSSVIRSLCRMKDVH 355
V LI S+C + +++ LD+ + E + SS R LC
Sbjct: 406 GYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYE 465
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
A +++ +MI +G P + ++ V++ A M A + + M+ GL DVYTYT ++
Sbjct: 466 KAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMV 525
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
+ G +E+A + NE ++ + VTY LI Y K ++ A +L M G
Sbjct: 526 DSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCL 585
Query: 476 PNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
PN+ Y+ LI C KA A ++ E M
Sbjct: 586 PNIVTYSALIDGHC-KAGQVEKACQIFERM 614
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 133/328 (40%), Gaps = 9/328 (2%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
ALL C S +E L D + G + + + + LI K+GK A EV +
Sbjct: 644 ALLDGFCKSHRVEEARKLLDAMSMEGCEPNQI----VYDALIDGLCKVGKLDEAQEVKTE 699
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
++G A TY I+ + K D A V KM+E P+ ++I CK GK
Sbjct: 700 MSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGK 759
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
EA+ + + EK P +I + ++ L++L+ + +
Sbjct: 760 TDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK-IETCLELLERMGSKGVAPNYVTYR 818
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+I C+ + A LL +M P A + VI ++K + ++ +L +
Sbjct: 819 VLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGLLDEIGQD 876
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV--TYHTLIRGYCKLEEFD 460
P + Y L+ ++E A +L E + L TY++LI C + +
Sbjct: 877 DTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVE 936
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSL 488
A +L +EM GV P + + LI+ L
Sbjct: 937 TAFQLFSEMTKKGVIPEMQSFCSLIKGL 964
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 1/117 (0%)
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
R G K Y L+ + E L + + + + + L+R +C+ F
Sbjct: 157 RQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSF 216
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
AL+ L +KD +P+ YN LIQ+ LKA +A + +M L L ++G T
Sbjct: 217 SIALEELGRLKDFRFRPSRSTYNCLIQAF-LKADRLDSASLIHREMSLANLRMDGFT 272
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 73/182 (40%), Gaps = 4/182 (2%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
K+ +++++ + R D + L ++ + N ++ + + G + A+E
Sbjct: 162 KHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALE 221
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
L ++ +P TY L+ + +++ A I E + R+ T C
Sbjct: 222 ELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLC 281
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG 514
K+ ++ AL L+ V P+ Y KLI LC +L + A L MR N
Sbjct: 282 KVGKWREALTLVETENFV---PDTVFYTKLISGLCEASL-FEEAMDFLNRMRATSCLPNV 337
Query: 515 IT 516
+T
Sbjct: 338 VT 339
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 145/323 (44%), Gaps = 11/323 (3%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
TV+I N ++ + + +++ G N TY ++AL + D A +
Sbjct: 145 TVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLL 204
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM--YPPQSVVAFLISSLC 313
+M G PD +IS CK GK KE ARE M P V LI+ +C
Sbjct: 205 VEMSSKGCDPDEVSYTTLISSLCKLGKVKE-------ARELAMSFTPSVPVYNALINGVC 257
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
+E T + A +LD+ + + ++++I +L +V + +L+KM + G P
Sbjct: 258 KE-YTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNL 316
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
F S+I + G A++ M G+ P+V Y LM G + + +A + N+
Sbjct: 317 HTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQ 376
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
+ N + TY LI GY K + D A ++ N M G PNV Y ++ LC ++
Sbjct: 377 MEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSM 436
Query: 494 DWRTAEKLLEDMRLKGLHLNGIT 516
+ A L+E+M+++ N +T
Sbjct: 437 -FNQAYCLIENMQVENCPPNTVT 458
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 143/318 (44%), Gaps = 7/318 (2%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI+ KLGK K A E+ F + Y I + + F+ A+ + ++M+ G
Sbjct: 222 LISSLCKLGKVKEARELAMSF-----TPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKG 276
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P+ II+ G + + V + P LI + + + A
Sbjct: 277 IDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHE-A 335
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
LD D E + +++++ LC + + A ++ ++M G P ++++I
Sbjct: 336 LDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDG 395
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y+KAGD+ A E+ M + G P+V YT ++ +A ++ + + +
Sbjct: 396 YAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPN 455
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
VT++T I+G C D A+K+ ++M + G PN YN+L+ SL LK + A L+
Sbjct: 456 TVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSL-LKDRRFGEAFGLV 514
Query: 503 EDMRLKGLHLNGITRALI 520
+DM +G+ LN +T I
Sbjct: 515 KDMEHRGIELNLVTYNTI 532
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 140/311 (45%), Gaps = 7/311 (2%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I + + G + A + F + D+ + Y ++AL F + M + G
Sbjct: 117 VIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDG 176
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P+ ++ CK + AH + K P + LISSLC+ + VK A
Sbjct: 177 MEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGK-VKEA 235
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++ F+ ++ ++++I +C+ A LL +M+++G P + ++I+A
Sbjct: 236 RELAMSFTP-----SVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINA 290
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
S AG++ ++ +L M +RG P+++T+T L+ G+ G EA + + + +
Sbjct: 291 LSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPN 350
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
V Y+ L+ G C A+ + N+M+ G PNV Y+ LI KA D A ++
Sbjct: 351 VVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYA-KAGDLDGASEVW 409
Query: 503 EDMRLKGLHLN 513
M G H N
Sbjct: 410 NWMITHGCHPN 420
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 129/327 (39%), Gaps = 7/327 (2%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELI-ALFSKLGKGKAAFEVFN 221
+L+K G E WD + +E V V N L+ L SK G A VFN
Sbjct: 321 SLIKGFFLKGGSHEALDFWDRMI----REGVVPNVVAYNALMHGLCSKRSLGDAV-SVFN 375
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ GC N TY I+ ++ D A V MI G P+ ++ C+
Sbjct: 376 QMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNS 435
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+A+ + + + P I LC V A+ + D +
Sbjct: 436 MFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGR-VDWAIKVFDQMGNSGCFPNTTTY 494
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+ ++ SL + + A L+ M G +N++I Y AG + A+E+L M
Sbjct: 495 NELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVV 554
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
RG KPD T ++ Y G++ A ++++ + Y +LI G C +
Sbjct: 555 RGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEE 614
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSL 488
A+ L M G+ PNV +N L++ L
Sbjct: 615 AIVYLRRMLSEGISPNVATWNVLVRHL 641
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 121/294 (41%), Gaps = 1/294 (0%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
+ LI F G A + +++ G V N Y + L ++ A SV
Sbjct: 315 NLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVF 374
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+M G P+ +I + K G A V+ +P ++ LC+
Sbjct: 375 NQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCR- 433
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ A ++++ E F++ I+ LC V A + +M + G P
Sbjct: 434 NSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTT 493
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N ++ + K A ++K M RG++ ++ TY ++ GY G + EA E+L +
Sbjct: 494 YNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMV 553
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
++ +T + +I YCK + + A++L++ + P++ Y LI +C
Sbjct: 554 VRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGIC 607
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 107/255 (41%), Gaps = 41/255 (16%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
TY IE L+ + D + ++M G + +I + + G +++A +
Sbjct: 78 TYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRM 137
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
++ ++ P TVK+ +LD E R I P
Sbjct: 138 QDFRVKP-----------------TVKIYNHILDALLDENRFQMINP------------- 167
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
+ S M +G P +N ++ A K + A ++L M S+G PD +YT
Sbjct: 168 ------IYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTT 221
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
L+S G+++EA E + + PV Y+ LI G CK F+ A +LL+EM + G
Sbjct: 222 LISSLCKLGKVKEA----RELAMSFTPSVPV-YNALINGVCKEYTFEEAFQLLDEMMNKG 276
Query: 474 VQPNVDEYNKLIQSL 488
+ PNV Y +I +L
Sbjct: 277 IDPNVISYTTIINAL 291
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 1/177 (0%)
Query: 314 QEDETVKLALDMLDDFSG-EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
+ + + LAL+ + ++ K+ + +I L +++ + LL +M EG
Sbjct: 51 KHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCS 110
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+F SVI +Y +AG A++ M+ +KP V Y ++ + + + I +
Sbjct: 111 EDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYS 170
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
KK+ + TY+ L++ CK D A KLL EM G P+ Y LI SLC
Sbjct: 171 NMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLC 227
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 138/290 (47%), Gaps = 5/290 (1%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
+L+ SK G+ + A +V + V + T +++L D A + E+M+
Sbjct: 153 TKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLH 212
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVV-AFLISSLCQEDETV 319
G ++ ++ CK + EA + ++ + P V + +I LC+ +
Sbjct: 213 RGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGR-L 271
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
+ A+D+ ++ S AI ++S+I CR D+ A LL KM+ + P + ++
Sbjct: 272 RDAVDIFEEMS--CAPTAIT-YNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTL 328
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+SA+ K G + A E+ + M + L PDV T+T L+ G G+ME+A E+L E +
Sbjct: 329 MSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGC 388
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ TY+ ++ GYCK + A +L+ + + G PN YN L+ C
Sbjct: 389 PPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCC 438
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 137/302 (45%), Gaps = 18/302 (5%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC-EKMIETGSLPDSEKVGKII 274
A E+ + G AN TY ++ L + + D A ++ ++ G PD +I
Sbjct: 203 ARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVI 262
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSG 331
CK G+ ++A ++ E P LI C+ DE ++L M+DD
Sbjct: 263 DGLCKAGRLRDAVDIF---EEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCA 319
Query: 332 EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
+ +++++ + C+M + A L +M++ P F S++ G M
Sbjct: 320 PD----VITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMED 375
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
A+E+L+ + RG P +YTY ++ GY Q+ +A E++ + + + VTY+ L+
Sbjct: 376 ALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVA 435
Query: 452 GYCKLEEFDCALKLLNEMKDVG--VQPNVDEYNKLIQSLCLKALDWRT--AEKLLEDMRL 507
G C+ D AL+ L+++ G +V Y ++ +LC D RT A + E+M
Sbjct: 436 GCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALC---RDGRTDDAVQFYEEMIQ 492
Query: 508 KG 509
+G
Sbjct: 493 RG 494
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 127/290 (43%), Gaps = 20/290 (6%)
Query: 225 DYGCVANQETYYFTIEAL-SRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
D G ++ T+ + L + K+ + +++ + G PD ++ I++ C
Sbjct: 3 DAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDT 62
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKP 340
A ++ E + LI LC+ DE + L LDM + + P
Sbjct: 63 TTAMALFDKMAELGAVN-HTTYYNLIHPLCKARLLDEAMGLLLDM--------KSRGMNP 113
Query: 341 ----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ VI LCR + A + +M ++ PP + ++ SKAG + A+++L
Sbjct: 114 GTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKAGRLRDAVQVL 172
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
+ M S PD T T ++ G ++++A E++ E + +TY L+ G CK
Sbjct: 173 QEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKC 232
Query: 457 EEFDCALK-LLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
E D A+ LL E+ G P++ Y+ +I LC KA R A + E+M
Sbjct: 233 ERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLC-KAGRLRDAVDIFEEM 281
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 133/347 (38%), Gaps = 48/347 (13%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEIL--NELIALFSKLGKGKAAFEVF 220
AL+ +C E AL +GE + T +I+ + +I K G+ + A ++F
Sbjct: 224 ALVDGLCKCERLDEAVALL-----LGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIF 278
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ C TY I R D A + KM++ PD ++S FCK
Sbjct: 279 EEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKM 335
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
G+ +A+ ++ K+ P L+ LC E ++ AL++L++ + I
Sbjct: 336 GRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGR-MEDALELLEEITRRGCPPTIYT 394
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++ V+ C+ V A+ L++ S G P +N +++ +AG A++ L +
Sbjct: 395 YNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLN 454
Query: 401 S-------------------------------------RGLKPDVYTYTGLMSGYANGGQ 423
S RG P T+ ++ Q
Sbjct: 455 SEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQ 514
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
++A E+L E K P T ++ YC+ A +L +E++
Sbjct: 515 PQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELR 561
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 135/285 (47%), Gaps = 12/285 (4%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL-PDSEK 269
G+ A + ++ + G +Q TY ++ + + A ++ KM E + P+
Sbjct: 196 GRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVI 255
Query: 270 VGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE---TVKLALDML 326
II CK G+ ++H ++ ++K ++P +I C +L +ML
Sbjct: 256 YSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEML 315
Query: 327 DDFSGEARKYA--IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
+ RK + + ++++I + + A L +M+ G P +NS+I +
Sbjct: 316 E------RKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFC 369
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV 444
K + A +M LM ++G PDV+T+T L+ GY ++++ E+L+E + + V
Sbjct: 370 KQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTV 429
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
TY+TLI G+C + + + AL L +M GV P++ N L+ LC
Sbjct: 430 TYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLC 474
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 130/304 (42%), Gaps = 12/304 (3%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V I + +I K G+ + +F + D G N TY I + A + +
Sbjct: 253 VVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQ 312
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M+E P+ +I+ F K GK EA +Y + + P +I C++D
Sbjct: 313 EMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQD 372
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ A DM + + + F+++I C K + LL +M G +
Sbjct: 373 R-LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTY 431
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N++I + GD+ A+++ + M S G+ PD+ T L+ G + G++++A E+ +K
Sbjct: 432 NTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQK 491
Query: 437 NHSRLSP-----------VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
+ L +TY+ LI G +F A +L EM G+ P+ Y+ +I
Sbjct: 492 SKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 551
Query: 486 QSLC 489
LC
Sbjct: 552 DGLC 555
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 122/277 (44%), Gaps = 7/277 (2%)
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP 300
A+ R + D S+ +KM D +I FC K A + + ++P
Sbjct: 90 AVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHP 149
Query: 301 PQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTL 360
L+ LC D V ALD+ + + F++++ LCR V A L
Sbjct: 150 DVVTFTTLLHGLCL-DHRVSEALDLFHQIC----RPDVLTFTTLMNGLCREGRVVEAVAL 204
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS-RGLKPDVYTYTGLMSGYA 419
L +M+ G P + + + K GD A+ +L+ M +KP+V Y+ ++ G
Sbjct: 205 LDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLC 264
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
G+ ++ + E + + VTY+ +I G+C + A +LL EM + + PNV
Sbjct: 265 KDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVV 324
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
YN LI + +K + A +L ++M +G+ N IT
Sbjct: 325 TYNALINAF-VKEGKFFEAAELYDEMLPRGIIPNTIT 360
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 116/291 (39%), Gaps = 26/291 (8%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
E+ ++ G VAN TY I + A + ++MI +G PD ++
Sbjct: 412 GMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 471
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
C GK K+A ++ ++ KM LD F+G
Sbjct: 472 GLCDNGKLKDALEMFKAMQKSKM-----------------------DLDASHPFNGVEPD 508
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+ ++ +I L A+ L +M G P ++S+I K + A +M
Sbjct: 509 --VLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 566
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
M S+ P+V T+ L++GY G++++ E+ E + + Y TLI G+ K
Sbjct: 567 FVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRK 626
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
+ + AL + EM GV P+ ++ K + A +LED++
Sbjct: 627 VGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKE-ELERAVAMLEDLQ 676
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 9/168 (5%)
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+K + A L S M+ P P FN ++ A + + + + M + ++ D+Y+
Sbjct: 59 IKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYS 118
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
+T L+ + + ++ A + K VT+ TL+ G C AL L +++
Sbjct: 119 FTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI- 177
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAE--KLLEDMRLKGLHLNGIT 516
+P+V + L+ LC + R E LL+ M GL + IT
Sbjct: 178 ---CRPDVLTFTTLMNGLCREG---RVVEAVALLDRMVENGLQPDQIT 219
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 165/395 (41%), Gaps = 17/395 (4%)
Query: 100 DGDKLENVLSLLQSSVDGYLESSLDSFELDLHEDFVLKVLETPLVLGENLVCFFKWVTSG 159
+G +L+ L +D L + ++ + ++ L + + V + V +G
Sbjct: 215 EGRQLDTAYHLFDQMLDQGLSPDVVTY------NSIISALSKARAMDKAAVVLVRMVKNG 268
Query: 160 VV------DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKG 213
+ ++LL CSS + ++ + G E V T N L+ K G+
Sbjct: 269 AMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGV-EPDVFT---YNTLMGYLCKNGRS 324
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
A ++F+ G N TY + + + + M+ G PD +
Sbjct: 325 MEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNIL 384
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEA 333
I + K GK +A ++++ R + + P ++ +LC + V A+ E
Sbjct: 385 IGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGK-VDDAMAQFGRLISEG 443
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
F ++I LC A+ L +MI G P N FN++++ K G + A
Sbjct: 444 LTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAK 503
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
+ LM ++ DV TY L+ GY G+++EA ++L + + + VTY+T+I GY
Sbjct: 504 NIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGY 563
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
CK + A L +M GV P + Y+ ++Q L
Sbjct: 564 CKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGL 598
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 144/320 (45%), Gaps = 9/320 (2%)
Query: 208 SKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC-EKMIETGSLPD 266
S++G AF + G A T+ ++AL +K A + +M G P+
Sbjct: 102 SRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPN 161
Query: 267 SEKVGKIISWFCKGGKAKEA-HVVYTLA---REKKMYPPQSVVAF--LISSLCQEDETVK 320
++ C ++++A H+++T+ + YPP VV++ +I+ L +E +
Sbjct: 162 VFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPD-VVSYNTVINGLLREGRQLD 220
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A + D + + ++S+I +L + + + A +L +M+ G P NS++
Sbjct: 221 TAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLL 280
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
Y +G A+ + K M G++PDV+TY LM G+ EA +I + K +
Sbjct: 281 HGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHK 340
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+ TY TL+ GY LL+ M G+QP+ +N LI + K A
Sbjct: 341 PNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYT-KHGKVDDAML 399
Query: 501 LLEDMRLKGLHLNGITRALI 520
L MR +GL+ + +T ++
Sbjct: 400 LFSKMRRQGLNPDTVTYGIV 419
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 137/318 (43%), Gaps = 2/318 (0%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
I N LI ++K GK A +F+K G + TY ++AL D A + ++
Sbjct: 380 IFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRL 439
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
I G PD+ +I C K +A + + + P L++ LC+E
Sbjct: 440 ISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMV 499
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+ A ++ D + + ++++I C V A LL M+ +G P +N+
Sbjct: 500 AR-AKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNT 558
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I+ Y K G + A + + M S+G+ P + TY+ ++ G + A E+ K+
Sbjct: 559 MINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSG 618
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
+ TY+ ++ G C+ D AL++ + + +N +I +L LK A
Sbjct: 619 IKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDAL-LKGGRHDEA 677
Query: 499 EKLLEDMRLKGLHLNGIT 516
+ L + +GL N +T
Sbjct: 678 KDLFASLLARGLVPNVVT 695
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 97/430 (22%), Positives = 170/430 (39%), Gaps = 76/430 (17%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGK---AAFEVF 220
LLK +C ++ L + + + +G ++++ + L +G+ A+ +F
Sbjct: 168 LLKGLCDENRSQQALHLLHTMM-VADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLF 226
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD-------------- 266
++ D G + TY I ALS+ + D A V +M++ G++P+
Sbjct: 227 DQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSS 286
Query: 267 ---SEKVG------------------KIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVV 305
++ +G ++ + CK G++ EA ++ ++ P +
Sbjct: 287 GKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATY 346
Query: 306 AFLISSLCQEDETVKLA--LDML-------------------------DD----FSGEAR 334
L+ E VK+ LDM+ DD FS + R
Sbjct: 347 GTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFS-KMR 405
Query: 335 KYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
+ + P + V+ +LC + V A ++ISEG P VF ++I
Sbjct: 406 RQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWD 465
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A E+ M RG+ P+ + L++ G + A I + + + +TY+TLI
Sbjct: 466 KAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLI 525
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
GYC + D A KLL M GV+PN YN +I C K A L M KG+
Sbjct: 526 DGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYC-KNGRIEDAFSLFRQMASKGV 584
Query: 511 HLNGITRALI 520
+ +T + I
Sbjct: 585 NPGIVTYSTI 594
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 96/241 (39%), Gaps = 10/241 (4%)
Query: 181 WDIVKEIGEK--EKGVLTVEIL-NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYF 237
WD +E+ + +G+ I N L+ K G A +F+ + TY
Sbjct: 464 WDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNT 523
Query: 238 TIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKK 297
I+ D A + E M+ G P+ +I+ +CK G+ ++A ++ K
Sbjct: 524 LIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKG 583
Query: 298 MYPPQSVVAFLISSLCQEDETV---KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDV 354
+ P + ++ L Q T +L L M+ K+ I ++ ++ LC+
Sbjct: 584 VNPGIVTYSTILQGLFQARRTAAAKELYLWMIK----SGIKFDIGTYNIILLGLCQNNCT 639
Query: 355 HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
A + + N FN +I A K G A ++ + +RGL P+V TY +
Sbjct: 640 DDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLM 699
Query: 415 M 415
M
Sbjct: 700 M 700
>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 447
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 133/283 (46%), Gaps = 2/283 (0%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G N T I +++SV K+++ G PD+ + ++ C G+ K +
Sbjct: 95 GIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRS 154
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
+ + Q L++ LC+ ET + A+ +L + + + +S++I
Sbjct: 155 LHFHDKVVAQGFQMNQVSYGTLLNGLCKIGET-RCAVKLLRMIEDRSTRPDVVMYSTIID 213
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
LC+ K V+ A S+M + G P ++++I + AG + A +L M + + P
Sbjct: 214 GLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINP 273
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
+VYTY L+ G+++EA ++L E VTY++++ G CK + D A L
Sbjct: 274 NVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALF 333
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
+MK G+QPN Y LI LC K + A+KL + + +KG
Sbjct: 334 MKMKKWGIQPNKYTYTALIDGLC-KGGRLKNAQKLFQHLLVKG 375
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 144/311 (46%), Gaps = 2/311 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
LN L+ G+ K + +K G NQ +Y + L + A + +
Sbjct: 138 LNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIE 197
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ + PD II CK +A+ ++ + ++P + LI C + +
Sbjct: 198 DRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLM 257
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
A +L++ + + ++ +I +LC+ V AK LL++M +G P +NSV
Sbjct: 258 G-AFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSV 316
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+ K+ ++ A + M+ G++P+ YTYT L+ G GG+++ A ++
Sbjct: 317 LDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGC 376
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
+ TY+ +I G CK FD AL + ++M+D G PN ++ +I+SL K + + AE
Sbjct: 377 CIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDK-AE 435
Query: 500 KLLEDMRLKGL 510
KLL M KGL
Sbjct: 436 KLLHGMIAKGL 446
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 1/179 (0%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
I F ++ L +MK A +L +M +G P N +I+ + G M + +L
Sbjct: 65 IIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLG 124
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
+ G +PD T LM G G+++ + ++ +++ V+Y TL+ G CK+
Sbjct: 125 KILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIG 184
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
E CA+KLL ++D +P+V Y+ +I LC K A +M +G+ N IT
Sbjct: 185 ETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLC-KDKIVNQAYDFFSEMNARGIFPNVIT 242
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 83/177 (46%), Gaps = 1/177 (0%)
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
+I C + + + ++L K++ G P N+++ G++ ++ + ++G
Sbjct: 106 LINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQG 165
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
+ + +Y L++G G+ A ++L + +R V Y T+I G CK + + A
Sbjct: 166 FQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAY 225
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
+EM G+ PNV Y+ LI CL A A LL +M LK ++ N T ++
Sbjct: 226 DFFSEMNARGIFPNVITYSTLIWGFCL-AGQLMGAFSLLNEMILKNINPNVYTYNIL 281
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 152/335 (45%), Gaps = 9/335 (2%)
Query: 179 ALWDIVKEIGEKEKGV-LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYF 237
A+ ++KE+ + +GV TV L+ S+ G V+++ + Y
Sbjct: 201 AVAGLLKEM--ENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSA 258
Query: 238 TIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKK 297
I A R A V ++ + G P+ G +I+ FCK G+ + A ++ + +
Sbjct: 259 VINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRG 318
Query: 298 MYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGA 357
+ Q V +I C+ V+ AL++ + I ++++ LCR+ + A
Sbjct: 319 VGHNQIVFNTMIDGYCRHG-MVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDA 377
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
K LL M +G P + ++IS ++K GDM A + + M +G +P V TY ++ G
Sbjct: 378 KKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDG 437
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
Y G + EA E +K TY L+ G+C + D AL+L EMK G +PN
Sbjct: 438 YIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPN 497
Query: 478 VDEYNKLIQSLCLKALDWRTAE--KLLEDMRLKGL 510
V Y L+ L A + R+ E +L +DM GL
Sbjct: 498 VVAYTALVSGL---AKEGRSEEAFQLYDDMLAAGL 529
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 3/181 (1%)
Query: 337 AIKPFSS--VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
++ P S+ V+ C+ V A LL ++ G +NS++ +Y++ +
Sbjct: 145 SVTPLSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAG 204
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+LK M +RG++P V TYT L+ G + G + + + +E K+ + Y +I YC
Sbjct: 205 LLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYC 264
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG 514
+ A ++ +E GV+PN Y LI C K AE LL DM+L+G+ N
Sbjct: 265 RGGNVRRASEVFDECVGHGVEPNERTYGALINGFC-KIGQIEAAEMLLADMQLRGVGHNQ 323
Query: 515 I 515
I
Sbjct: 324 I 324
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 122/261 (46%), Gaps = 4/261 (1%)
Query: 273 IISWFCKGGKAKEAH-VVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSG 331
++ FCK G +AH ++ L R + L S Q ++ L L +
Sbjct: 154 VVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGL--LKEMEN 211
Query: 332 EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
+ + ++ ++ L R D+ + + +M + +++VI+AY + G++
Sbjct: 212 RGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRR 271
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
A E+ G++P+ TY L++G+ GQ+E A +L + + + + ++T+I
Sbjct: 272 ASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMID 331
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH 511
GYC+ + AL++ M+ +G++ ++ YN L LC + A+KLL M KG+
Sbjct: 332 GYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLC-RVNRMEDAKKLLHIMAEKGVA 390
Query: 512 LNGITRALIRAVKELEEDAIE 532
N ++ + ++ E D +E
Sbjct: 391 PNYVSYTTLISIHAKEGDMVE 411
>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
Length = 645
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 153/344 (44%), Gaps = 12/344 (3%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N ++ K + A+E+F++ G V + TY I A + A V ++M+
Sbjct: 155 NAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVA 214
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
P+ +I C+ G +A ++ +E M P Q L+S CQ D+ V
Sbjct: 215 QQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDD-VN 273
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A+ + + F+++I C+ K AK + +M G P V+NS++
Sbjct: 274 SAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLM 333
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
++G+ A+ + + M GL PD +T + ++ G +GGQM A L +++
Sbjct: 334 DGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVN 393
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
L+ Y+ LI YC++ + AL M +VG++PNV Y+ LI + + A
Sbjct: 394 LNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRG-KMQIAMA 452
Query: 501 LLEDMRLKGLHLNGIT-RALIR---------AVKELEEDAIENG 534
+ +M KG+ N +T ALI A L ++ IENG
Sbjct: 453 IYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENG 496
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 124/284 (43%), Gaps = 21/284 (7%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A +F+ + G NQ TY + +R + A + ++++++G P++ +I
Sbjct: 240 AERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLID 299
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS----------SLCQEDETVKLALDM 325
FCK + EA ++ + P V L+ +L E +L L
Sbjct: 300 GFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGL-C 358
Query: 326 LDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSK 385
D+F+ S V+R LC +H A L + +G A +N++I Y +
Sbjct: 359 PDEFT----------CSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCR 408
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
G++ A+ M G++P+V +Y+ L+ G++ G+M+ A I E + VT
Sbjct: 409 IGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVT 468
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
Y LI G+ K D A +L EM + G+ PN + L+ LC
Sbjct: 469 YTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLC 512
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 151/374 (40%), Gaps = 23/374 (6%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
++ A+C + L+D +KE G + N L++ + +A ++ +
Sbjct: 227 MICALCEEGCIGDAERLFDAMKEAGMQPNQY----TYNVLMSGHCQRDDVNSAVVLYQEL 282
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
G N + I+ + K F A + +M G P ++ + G A
Sbjct: 283 LKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNA 342
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
+EA +Y + P + + ++ LC + + +A L + +++
Sbjct: 343 QEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQ-MHVADRFLQGVQEDGVNLNAAAYNA 401
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
+I CR+ ++ A ++M G P ++S+I +SK G M AM + M ++G
Sbjct: 402 LIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKG 461
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
++P+V TYT L+ G+A G ++ A + E +N + +T L+ G C+ A+
Sbjct: 462 IEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAV 521
Query: 464 KLLNE-----------------MKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
+ + E +++ + PN Y LI L L A KL MR
Sbjct: 522 RFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCE-AGKLFSYMR 580
Query: 507 LKGLHLNGITRALI 520
G+ + T L+
Sbjct: 581 KSGMIPDSFTYTLL 594
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 83/169 (49%), Gaps = 1/169 (0%)
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
A+ ++V+ L + + A L +M+ G P +N++I+A G + A E+
Sbjct: 150 ALPACNAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVW 209
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
M ++ + P+V TYT ++ G + +A + + K+ + + TY+ L+ G+C+
Sbjct: 210 DQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQR 269
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
++ + A+ L E+ G+ PN + LI C KA + A+ + +M
Sbjct: 270 DDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFC-KAKRFSEAKGMFLEM 317
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 1/145 (0%)
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P N+V+ KA A E+ M RGL P V TY L++ G + +A E+
Sbjct: 149 PALPACNAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEV 208
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
++ + VTY T+I C+ A +L + MK+ G+QPN YN L+ C
Sbjct: 209 WDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQ 268
Query: 491 KALDWRTAEKLLEDMRLKGLHLNGI 515
+ D +A L +++ GL+ N +
Sbjct: 269 RD-DVNSAVVLYQELLKSGLNPNAV 292
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 108/291 (37%), Gaps = 55/291 (18%)
Query: 188 GEKEKGV-LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRK 246
G +E GV L N LI + ++G + A + + G N +Y I+ S+R
Sbjct: 386 GVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRG 445
Query: 247 IFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVA 306
A ++ +M+ G P+ +I K G A ++ E + P V+
Sbjct: 446 KMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVS 505
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
L+ LC+E+ V+ A+ + ++SG + D+H
Sbjct: 506 VLVDGLCRENR-VQEAVRFVMEYSG-----------------LKCSDIH----------- 536
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
SV S ++ + L P+ Y L+ G GQ E
Sbjct: 537 -----------SVFSNFT--------------IEEECLIPNSVIYMTLIYGLYLDGQHCE 571
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
A ++ + +K+ TY LIRG C L A+ L +M +GV+P
Sbjct: 572 AGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKPT 622
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 123/268 (45%), Gaps = 7/268 (2%)
Query: 225 DYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAK 284
D AN TY I++L + + ++ V E+M+ G PD ++ F + +
Sbjct: 3 DKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNME 62
Query: 285 EAHVVYTLAREKKMYPPQSVVAFLISSLCQ---EDETVKLALDMLDDFSGEARKYAIKPF 341
+A VY E P LI L + DE++K+ L + + +++ +
Sbjct: 63 KAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKI----LSEMVMRGQTPSMQAY 118
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
SS++R+L + + V A +L +MI G P +F +I +AG + A E K M
Sbjct: 119 SSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPK 178
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G +P+V Y L+ G + GQ+E+A + E K + VTY+TL+ CK +
Sbjct: 179 HGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEE 238
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
KL M+ G PNV ++ LI LC
Sbjct: 239 GCKLFEAMRAAGYVPNVITFSTLIHGLC 266
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 134/306 (43%), Gaps = 2/306 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N ++ F++ + A EV+ + G + +Y+ I L++ D + + +M+
Sbjct: 48 FNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMV 107
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
G P + ++ K + A ++ +P + + LI LCQ + V
Sbjct: 108 MRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGK-V 166
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
K A + + + ++ ++ LC + A TL ++M S P +N++
Sbjct: 167 KDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTL 226
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+ A KA + ++ + MR+ G P+V T++ L+ G G++E+A E+ +
Sbjct: 227 LDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGC 286
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
+ + TY TLI G C+ E+ A +L +M + P+ YN LI C + AE
Sbjct: 287 KPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRG-SMDEAE 345
Query: 500 KLLEDM 505
KL +M
Sbjct: 346 KLYREM 351
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 144/316 (45%), Gaps = 3/316 (0%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
V + N L+ G+ + A +F + + C + TY ++A+ + + + +
Sbjct: 184 NVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLF 243
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
E M G +P+ +I C+ G+ ++A V+ E P + LIS LC+
Sbjct: 244 EAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRA 303
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS-EGPPPGNA 374
++ ++ A ++ + + ++S+I C+ + A+ L +M G P
Sbjct: 304 EKVIQ-ARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIV 362
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
FN++I + K G + A E++ M ++GL D TY L++G + +++EA E+ +
Sbjct: 363 TFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQM 422
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
++ L PV+ + + G CK D A + + G PN + + L +SL +K
Sbjct: 423 REKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESL-IKLGR 481
Query: 495 WRTAEKLLEDMRLKGL 510
A+KL+E + + +
Sbjct: 482 VEDAQKLMEPAKARDI 497
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 36/148 (24%)
Query: 399 MRSRGLKPDVYTYT-----------------------------------GLMSGYANGGQ 423
MR + + +V+TY+ G+M G+A
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
ME+A E+ ++ + V+YH LI G K+ + D +LK+L+EM G P++ Y+
Sbjct: 61 MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120
Query: 484 LIQSLCLKALDWRTAEKLLEDMRLKGLH 511
L+++L KA A L ++M G H
Sbjct: 121 LVRALA-KARRVDHASSLFDEMIRGGHH 147
>gi|255566203|ref|XP_002524089.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536657|gb|EEF38299.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1072
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 182/416 (43%), Gaps = 49/416 (11%)
Query: 104 LENVLSLLQSSVD-GYLESSLDSFELDLHEDFVLKVLETPLVLGENLVCFFKW--VTSGV 160
L+ + +L SS D ++ +L+ L VL++L + G + FF W V +G
Sbjct: 656 LKEICKILSSSKDWCIMQEALEKCTLQFTPGLVLEILHNCSMHGNAALKFFSWLGVQTGY 715
Query: 161 V---DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVL-TVEILNELIALFSKLGKGKAA 216
+ A+ S +K+ + + E+ + KG L T + +I + + G + +
Sbjct: 716 CHTKETYNMAMKISGREKDFKHMRSLFYEM--RRKGCLITPDTWAIMIMQYGRTGLTEIS 773
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRK--IFDWAWSVCEKMIETGSLPDSEKVGKII 274
+ F + D G + N TY + + +L +K D A + +MI T +PD E VG +
Sbjct: 774 LKTFTEMKDNGYIPNDSTYKYLLISLCGKKGRKVDEAIKIFHEMIRTRYIPDREVVGTYL 833
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR 334
S C+ G+ EA SLC+ T+ L+
Sbjct: 834 SCLCEAGRLSEARKS-------------------TDSLCRIGYTIPLS------------ 862
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
+S IR+LCR + A +LL ++ +E + +++ + G A+
Sbjct: 863 ------YSLYIRALCRSGRLEEALSLLDEVGTERSTLDQYTYGTLVHGLLRKGRQEEALA 916
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
++ M+ G+ P V+ YT L+ + Q+E+A +I + +++ + VTY LIRGY
Sbjct: 917 KIESMKEAGINPTVHVYTSLIVHFFKEKQIEKAMQIFEKMQQDGCEPTVVTYSALIRGYM 976
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+E D A +LN +K G +P+ Y+ I LC KA A +LL M G+
Sbjct: 977 NMERADDAWSVLNHLKLKGPKPDFKTYSMFISCLC-KAGKSEEALQLLSRMLEDGI 1031
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/414 (21%), Positives = 166/414 (40%), Gaps = 35/414 (8%)
Query: 119 LESSLDSFELDLHEDFVLKVLETPLVLGENLVCFFKWVTSGVVDALLKAICSSVGK---- 174
+E L++ + V KVL+ + FF WV + C +
Sbjct: 163 MEERLENLGFYFEPEIVEKVLKRCFKVPHLAFRFFSWV------KMRDGFCHTTKTYYTM 216
Query: 175 -------KEVYALWDIVKEIGEK--EKGVLTVEILNELIALFSKLGKGK---AAFEVFNK 222
KE + D+V+E+ + EK + T IL S+ GK K A F K
Sbjct: 217 LYIAGEAKEFKVVDDLVEEMEKNSCEKDIKTWSIL------ISQFGKAKLIGKALLFFEK 270
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
GC +++ Y + +L + A + ++M++ D ++ K G
Sbjct: 271 MKTSGCEPDEKIYKMMVHSLCNAGKGEVALAFYKEMVQKDMRLDLSLYKILLISMAKSGD 330
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
H+V P V ++ S C + ++ AL+++ D + +
Sbjct: 331 VGAVHLVANDMSRLSQIPEHDVNVCILKSFCVAGK-IREALELIRDLKNKDILIDYEYLG 389
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
++++ LCR + A ++ M ++ +I+ Y + D++ A+E+ + M+
Sbjct: 390 TLVKGLCRGDRITDAVEIVEIMKKRNLIDAK-IYGIIINGYLRKKDLSKAIELFQRMKES 448
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G++P TYT LM N Q ++ E+ NE + R+ V ++ + + A
Sbjct: 449 GIQPITSTYTELMQCLFNLNQYDKGFELFNEMLERGIRVDSVATMAIVAAHVRQNHISEA 508
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE--KLLEDMRLKGLHLNG 514
++ N MKD G P Y+ I+ LC + RT E K+L M+ + +N
Sbjct: 509 WEVFNTMKDKGANPTWKSYSIFIKELCRVS---RTDEILKVLYKMQASKIFINN 559
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 86/200 (43%), Gaps = 1/200 (0%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
+Y I AL R + A S+ +++ S D G ++ + G+ +EA
Sbjct: 862 SYSLYIRALCRSGRLEEALSLLDEVGTERSTLDQYTYGTLVHGLLRKGRQEEALAKIESM 921
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
+E + P V LI +E + K A+ + + + + + +S++IR M+
Sbjct: 922 KEAGINPTVHVYTSLIVHFFKEKQIEK-AMQIFEKMQQDGCEPTVVTYSALIRGYMNMER 980
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
A ++L+ + +GP P ++ IS KAG A+++L M G+ P +
Sbjct: 981 ADDAWSVLNHLKLKGPKPDFKTYSMFISCLCKAGKSEEALQLLSRMLEDGIVPSTINFRT 1040
Query: 414 LMSGYANGGQMEEACEILNE 433
+ G G+ + A ++ +
Sbjct: 1041 VFFGLNCEGKNDLARTVMQQ 1060
>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Cucumis
sativus]
Length = 830
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 110/225 (48%), Gaps = 1/225 (0%)
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALD 324
PD +I CK G + A+ +Y R K+ +P ++ L + + + A +
Sbjct: 444 PDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFK-NGNISEARN 502
Query: 325 MLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
D ++ + ++ +I R+ + A L KMI G P FN++I+ +
Sbjct: 503 YFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFC 562
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV 444
+ GD+ A +ML+++R +GL P V TYT LM+ Y G M+E L+E + N + V
Sbjct: 563 RRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHV 622
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
TY LI+G C+ + +L+LL M G+ P+ YN +IQ C
Sbjct: 623 TYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFC 667
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 128/295 (43%), Gaps = 10/295 (3%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
L+ LF K G A F+ + + + Y I+ R A + KMIE G
Sbjct: 488 LLGLF-KNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERG 546
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P +I+ FC+ G EA + + R K + P L+++ C+
Sbjct: 547 ITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGN----- 601
Query: 323 LDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+ + F E A+ P ++ +I+ LCR +H + LL M ++G P + +N+
Sbjct: 602 MQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNT 661
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I + K ++T A+++ +M P TY L++ G +++ ++ + +
Sbjct: 662 IIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRN 721
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
L TY T+I+ +C + AL N+M G ++ +Y+ +I LC + L
Sbjct: 722 ITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGL 776
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 131/295 (44%), Gaps = 10/295 (3%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI-I 274
A V K D A+ TY L + D W V ++ +G+ P SE I I
Sbjct: 189 ALFVIAKMKDLNFQASVPTYN---SLLHNMRHTDIMWDVYNEIKVSGA-PQSECTTSILI 244
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSV-VAFLISSLCQEDETVKLALDMLDDFSGEA 333
C+ K ++A + L K+ P V + ++S C+ + +A
Sbjct: 245 HGLCEQSKLEDA--ISFLHDSNKVVGPSIVSINTIMSKFCKVG-LIDVARSXFCLMVKNG 301
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
+ ++ ++ LC + A M G P +N++ + G M+ A
Sbjct: 302 LLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGAR 361
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
++++ M +GL PD+ TYT L+ G+ G +EEA ++ E +L+ + Y+ L+
Sbjct: 362 KVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCL 421
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLK 508
CK+ + AL L +EM+ + ++P+ Y+ LI LC + R A +L E MRLK
Sbjct: 422 CKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQR-AYQLYEQMRLK 475
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 128/311 (41%), Gaps = 2/311 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
+N +++ F K+G A F G + + +Y + L D A + M
Sbjct: 274 INTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDME 333
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G PD + F G A V + + P LI CQ +
Sbjct: 334 KHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGN-I 392
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
+ AL + + K + ++ ++ LC++ + A TL +M + P V++ +
Sbjct: 393 EEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSIL 452
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I K G + A ++ + MR + P + ++ G G + EA + +
Sbjct: 453 IHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDL 512
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
V Y+ +I GY +L+ A++L +M + G+ P+V +N LI C + D A
Sbjct: 513 MEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRG-DLMEAR 571
Query: 500 KLLEDMRLKGL 510
K+LE +RLKGL
Sbjct: 572 KMLEVIRLKGL 582
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 123/323 (38%), Gaps = 49/323 (15%)
Query: 127 ELDLHEDFVL-KVLETPLV----LGENLVCFFKWVTSGVV------DALLKAICSSVGKK 175
+DL ED VL ++ V + E + ++K + G+ + L+ C
Sbjct: 509 RMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLM 568
Query: 176 EVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETY 235
E + ++++ G V ++N + ++G + F ++ V TY
Sbjct: 569 EARKMLEVIRLKGLVPSVVTYTTLMNA----YCEVGNMQEMFHFLHEMEANAVVPTHVTY 624
Query: 236 YFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE 295
I+ L R+ + + E M G LPDS II FCKG + +A +Y +
Sbjct: 625 TVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLL 684
Query: 296 KKMYPPQSVVAFLISSLC--------------QEDETVKL-------------------- 321
P Q LI++LC ED + L
Sbjct: 685 HNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSK 744
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
AL + + +I+ +S+VI LC+ + AK M+SEG P + +V++
Sbjct: 745 ALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLN 804
Query: 382 AYSKAGDMTPAMEMLKLMRSRGL 404
A+ + G+ + E L ++ G
Sbjct: 805 AFHQQGNNSSVFEFLAMVVKSGF 827
>gi|383157590|gb|AFG61134.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157592|gb|AFG61135.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157594|gb|AFG61136.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157598|gb|AFG61138.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157600|gb|AFG61139.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157604|gb|AFG61141.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157608|gb|AFG61143.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157610|gb|AFG61144.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157612|gb|AFG61145.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157614|gb|AFG61146.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157618|gb|AFG61148.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157620|gb|AFG61149.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
Length = 133
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 81/130 (62%)
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N+VI+ K AM +L+ M R +KPD+Y Y +MS YA G+ME+ACE+ ++ +
Sbjct: 1 YNAVITGLCKGEKPDEAMTLLEEMPGRHIKPDIYAYNVIMSSYAKAGKMEKACEVFSKTE 60
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
++ + ++Y LI G+C+ + A +E+K G PN D Y+KLI++ C++ DW
Sbjct: 61 NDNIKSHFISYQILIDGFCRQGSLEKAHHYFSELKKSGRWPNKDSYSKLIRACCIEGFDW 120
Query: 496 RTAEKLLEDM 505
RTA+ LL++M
Sbjct: 121 RTAQTLLDEM 130
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 3/133 (2%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+++VI LC+ + A TLL +M P +N ++S+Y+KAG M A E+
Sbjct: 1 YNAVITGLCKGEKPDEAMTLLEEMPGRHIKPDIYAYNVIMSSYAKAGKMEKACEVFSKTE 60
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+ +K +Y L+ G+ G +E+A +E KK+ + +Y LIR C +E FD
Sbjct: 61 NDNIKSHFISYQILIDGFCRQGSLEKAHHYFSELKKSGRWPNKDSYSKLIRACC-IEGFD 119
Query: 461 --CALKLLNEMKD 471
A LL+EM++
Sbjct: 120 WRTAQTLLDEMEE 132
>gi|225445222|ref|XP_002280919.1| PREDICTED: pentatricopeptide repeat-containing protein At5g21222
[Vitis vinifera]
gi|297738818|emb|CBI28063.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 161/354 (45%), Gaps = 15/354 (4%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+A++ A S KE ++ +K+ G K T N LI + G + ++ +
Sbjct: 145 NAMINAFSESGNVKEAMKIFRKMKDRGCKP----TTSTFNTLIKGYGNAGMPEECLKLLD 200
Query: 222 KFGDYGCV-ANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
V N T+ I A +K AW+V KM +G PD + + +
Sbjct: 201 LMSQEENVKPNDRTFNSLIRAWCNKKRITEAWNVVYKMAASGLQPDVVTYNTLARAYAQN 260
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
G+ A + + ++ P + +I+ C+E + +K AL L R Y + P
Sbjct: 261 GETSRAEGMILEMQNNRVMPNERTCGIIINGYCKEGK-MKDALRFLYRM----RNYGVHP 315
Query: 341 ----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
F+S+I+ + D G L+ M G P F+++++A+S G M E+
Sbjct: 316 NLVIFNSLIKGFLDITDTDGVDEALTLMEEFGVKPDVVTFSTIMNAWSSVGLMDKCQEIF 375
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
M G++PD++ ++ L GY G+ E+A +L K+ + + V + T+I G+C
Sbjct: 376 DDMVKAGIEPDIHAFSILAKGYVRAGEPEKAESLLTAMGKSGVQPNVVIFTTIISGWCSA 435
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+ + A ++ +M ++G+ PN+ + LI +A + + AE+LL+ M KG+
Sbjct: 436 GKMEYASRVYEKMCEMGICPNLKTFETLIWGYG-EAKEPQKAEELLQIMEQKGV 488
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 147/295 (49%), Gaps = 6/295 (2%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
TV +L+ + + GK + A +FN + G TY + AL+R+K F S+
Sbjct: 70 TVRSRTKLMNILIEKGKPQEAQLIFNSLTEEGHRPTLITYTTLLAALTRQKRFKSIPSLI 129
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI---SSL 312
K+ + G PDS +I+ F + G KEA ++ +++ P S LI +
Sbjct: 130 SKLEKNGLKPDSVFFNAMINAFSESGNVKEAMKIFRKMKDRGCKPTTSTFNTLIKGYGNA 189
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
+E +KL LD++ E K + F+S+IR+ C K + A ++ KM + G P
Sbjct: 190 GMPEECLKL-LDLMSQ--EENVKPNDRTFNSLIRAWCNKKRITEAWNVVYKMAASGLQPD 246
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+N++ AY++ G+ + A M+ M++ + P+ T +++GY G+M++A L
Sbjct: 247 VVTYNTLARAYAQNGETSRAEGMILEMQNNRVMPNERTCGIIINGYCKEGKMKDALRFLY 306
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
+ + V +++LI+G+ + + D + L M++ GV+P+V ++ ++ +
Sbjct: 307 RMRNYGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEFGVKPDVVTFSTIMNA 361
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 106/199 (53%), Gaps = 9/199 (4%)
Query: 325 MLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
+ + + E + + +++++ +L R K +L+SK+ G P + FN++I+A+S
Sbjct: 93 IFNSLTEEGHRPTLITYTTLLAALTRQKRFKSIPSLISKLEKNGLKPDSVFFNAMINAFS 152
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN-EAKKNHSRLSP 443
++G++ AM++ + M+ RG KP T+ L+ GY N G EE ++L+ +++ + + +
Sbjct: 153 ESGNVKEAMKIFRKMKDRGCKPTTSTFNTLIKGYGNAGMPEECLKLLDLMSQEENVKPND 212
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
T+++LIR +C + A ++ +M G+QP+V YN L ++ R +LE
Sbjct: 213 RTFNSLIRAWCNKKRITEAWNVVYKMAASGLQPDVVTYNTLARAYAQNGETSRAEGMILE 272
Query: 504 --------DMRLKGLHLNG 514
+ R G+ +NG
Sbjct: 273 MQNNRVMPNERTCGIIING 291
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 71/136 (52%), Gaps = 1/136 (0%)
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A+ + + + EG P + ++++A ++ ++ + GLKPD + +++
Sbjct: 90 AQLIFNSLTEEGHRPTLITYTTLLAALTRQKRFKSIPSLISKLEKNGLKPDSVFFNAMIN 149
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM-KDVGVQ 475
++ G ++EA +I + K + + T++TLI+GY + LKLL+ M ++ V+
Sbjct: 150 AFSESGNVKEAMKIFRKMKDRGCKPTTSTFNTLIKGYGNAGMPEECLKLLDLMSQEENVK 209
Query: 476 PNVDEYNKLIQSLCLK 491
PN +N LI++ C K
Sbjct: 210 PNDRTFNSLIRAWCNK 225
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 117/262 (44%), Gaps = 36/262 (13%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
GC+ N TY I+ + K D A+ M G P+ II+ C+ G+ KE
Sbjct: 13 GCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKET 72
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
V + +K Y P V +++++
Sbjct: 73 SEVL-VEMSRKGYVPDEVT-----------------------------------YNTLVN 96
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
C+ + H A L ++M+ G P + S+I++ KAG++ AME M RGL P
Sbjct: 97 GYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCP 156
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
+ TYT +++G+A G ++EA +LNE ++ S VTY+ LI G+C L + A+ LL
Sbjct: 157 NERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLL 216
Query: 467 NEMKDVGVQPNVDEYNKLIQSL 488
+M GV P+V Y+ +I
Sbjct: 217 QDMVGKGVLPDVVSYSTIISGF 238
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 142/328 (43%), Gaps = 2/328 (0%)
Query: 189 EKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
E+ + V N +I + KL + AF G G N T+ I L R
Sbjct: 10 ERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRL 69
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
V +M G +PD +++ +CK G +A V++ + P L
Sbjct: 70 KETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSL 129
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
I+S+C+ + A++ D + ++++I + + A +L++M G
Sbjct: 130 INSMCKAG-NLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSG 188
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P +N++I+ + G M A+ +L+ M +G+ PDV +Y+ ++SG+A +++ A
Sbjct: 189 FIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAF 248
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
++ E VTY +LI+G C+ A + EM + + P+ Y LI +
Sbjct: 249 QMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAY 308
Query: 489 CLKALDWRTAEKLLEDMRLKGLHLNGIT 516
C K D A L ++M KG + +T
Sbjct: 309 C-KEGDLNKALHLHDEMIQKGFLPDAVT 335
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 133/302 (44%), Gaps = 16/302 (5%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K G A E F++ G N+ TY I +++ + D A+ V +M +G
Sbjct: 129 LINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSG 188
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+P +I+ C G+ +EA + K + P + +IS + E + A
Sbjct: 189 FIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQE-LDRA 247
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
M + G++ +SS+I+ LC + + A + +M++ PP + ++I+A
Sbjct: 248 FQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINA 307
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y K GD+ A+ + M +G PD TY L++G + +EA +L + + S S
Sbjct: 308 YCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPS 367
Query: 443 PVTYHTLI---------------RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
VTY+TLI +G+C D A ++ M + +PN YN +I
Sbjct: 368 AVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHG 427
Query: 488 LC 489
C
Sbjct: 428 HC 429
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 77/151 (50%), Gaps = 1/151 (0%)
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
+M G P +N++I Y K A L+ M +GL+P++ T+ +++G
Sbjct: 5 FFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLC 64
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
G+++E E+L E + VTY+TL+ GYCK F AL L EM G+ PNV
Sbjct: 65 RDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVV 124
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
Y LI S+C KA + A + + M ++GL
Sbjct: 125 TYTSLINSMC-KAGNLNRAMEFFDQMHVRGL 154
>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13630-like [Cucumis sativus]
Length = 830
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 110/225 (48%), Gaps = 1/225 (0%)
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALD 324
PD +I CK G + A+ +Y R K+ +P ++ L + + + A +
Sbjct: 444 PDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFK-NGNISEARN 502
Query: 325 MLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
D ++ + ++ +I R+ + A L KMI G P FN++I+ +
Sbjct: 503 YFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFC 562
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV 444
+ GD+ A +ML+++R +GL P V TYT LM+ Y G M+E L+E + N + V
Sbjct: 563 RRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHV 622
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
TY LI+G C+ + +L+LL M G+ P+ YN +IQ C
Sbjct: 623 TYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFC 667
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 129/295 (43%), Gaps = 10/295 (3%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
L+ LF K G A F+ + + + Y I+ R A + KMIE G
Sbjct: 488 LLGLF-KNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERG 546
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P +I+ FC+ G EA + + R K + P L+++ C+
Sbjct: 547 ITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGN----- 601
Query: 323 LDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+ + F E A+ P ++ +I+ LCR +H + LL M ++G P + +N+
Sbjct: 602 MQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNT 661
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I + K ++T A+++ +M P TY L++ G +++ ++ + +
Sbjct: 662 IIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRN 721
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
L VTY T+I+ +C + AL N+M G ++ +Y+ +I LC + L
Sbjct: 722 ITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGL 776
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 121/262 (46%), Gaps = 7/262 (2%)
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKI-ISWFCKGGKAKEAHVVYTLAREKKMYPPQSV-VA 306
D W V ++ +G+ P SE I I C+ K ++A + L K+ P V +
Sbjct: 219 DIMWDVYNEIKVSGA-PQSECTTSILIHGLCEQSKLEDA--ISFLHDSNKVVGPSIVSIN 275
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
++S C+ + +A + ++ ++ LC + A M
Sbjct: 276 TIMSKFCKVG-LIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEK 334
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
G P +N++ + G M+ A ++++ M +GL PD+ TYT L+ G+ G +EE
Sbjct: 335 HGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEE 394
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A ++ E +L+ + Y+ L+ CK+ + AL L +EM+ + ++P+ Y+ LI
Sbjct: 395 ALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIH 454
Query: 487 SLCLKALDWRTAEKLLEDMRLK 508
LC + R A +L E MRLK
Sbjct: 455 GLCKEGFVQR-AYQLYEQMRLK 475
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 123/323 (38%), Gaps = 49/323 (15%)
Query: 127 ELDLHEDFVL-KVLETPLV----LGENLVCFFKWVTSGVV------DALLKAICSSVGKK 175
+DL ED VL ++ V + E + ++K + G+ + L+ C
Sbjct: 509 RMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLM 568
Query: 176 EVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETY 235
E + ++++ G V ++N + ++G + F ++ V TY
Sbjct: 569 EARKMLEVIRLKGLVPSVVTYTTLMNA----YCEVGNMQEMFHFLHEMEANAVVPTHVTY 624
Query: 236 YFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE 295
I+ L R+ + + E M G LPDS II FCKG + +A +Y +
Sbjct: 625 TVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLL 684
Query: 296 KKMYPPQSVVAFLISSLC--------------QEDETVKL-------------------- 321
P Q LI++LC ED + L
Sbjct: 685 HNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSK 744
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
AL + + +I+ +S+VI LC+ + AK M+SEG P + +V++
Sbjct: 745 ALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLN 804
Query: 382 AYSKAGDMTPAMEMLKLMRSRGL 404
A+ + G+ + E L ++ G
Sbjct: 805 AFHQQGNNSSVFEFLAMVVKSGF 827
>gi|414591141|tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea mays]
Length = 374
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 121/257 (47%), Gaps = 2/257 (0%)
Query: 254 VCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC 313
V ++ + G P+ G +I+ FCK G+ + A ++ + + + Q + +I C
Sbjct: 95 VLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYC 154
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
++ V AL + + I ++++ LCR+ + AKTLL MI G P
Sbjct: 155 RKG-MVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNY 213
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+ ++IS + K GDM A + + M +G P V TY ++ GYA G + EA E
Sbjct: 214 VTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIREAERFRKE 273
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
+K TY +L+ G+C + D ALKL EMK G +PNV Y LI L K
Sbjct: 274 MEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLA-KEG 332
Query: 494 DWRTAEKLLEDMRLKGL 510
A +L +DM GL
Sbjct: 333 RSEAAFQLYDDMLKAGL 349
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 115/286 (40%), Gaps = 36/286 (12%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F K+G+ +AA + G NQ + I+ R+ + D A + M + G
Sbjct: 114 LINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMG 173
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
D + C+ + EA + + E + P LIS C++ + V
Sbjct: 174 VELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMV--- 230
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
EAR+ L +M +G P +N +I
Sbjct: 231 ---------EARR------------------------LFREMAEKGATPSVVTYNVMIHG 257
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y+K G + A K M +G PDVYTY L+ G+ G+++ A ++ E K+ + +
Sbjct: 258 YAKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPN 317
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
V Y LI G K + A +L ++M G+ P+ Y+ L+ SL
Sbjct: 318 VVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSL 363
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 27/216 (12%)
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
S V+ LC+ V A+ LL M G +NS++ Y + D E+L++M +
Sbjct: 18 SVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMEN 77
Query: 402 RGL------------------------KPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
G+ +P+ TY L++G+ GQME A +L + +
Sbjct: 78 EGIEATVGDGTCGGPPKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQ 137
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC-LKALDWR 496
L+ + ++T+I GYC+ D ALK+ M+ +GV+ ++ YN L LC + LD
Sbjct: 138 GVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLD-- 195
Query: 497 TAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIE 532
A+ LL M G+ N +T + ++ + D +E
Sbjct: 196 EAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVE 231
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 1/154 (0%)
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
G +L + + G P + +I+ + K G M A +L M+ +G+ + + ++
Sbjct: 91 GPPKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMI 150
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
GY G +++A +I +K L TY+TL G C++ D A LL+ M ++GV
Sbjct: 151 DGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVV 210
Query: 476 PNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
PN Y LI C K D A +L +M KG
Sbjct: 211 PNYVTYTTLISIHC-KDGDMVEARRLFREMAEKG 243
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 95/238 (39%), Gaps = 36/238 (15%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
I N +I + + G A ++ G + TY L R D A ++ M
Sbjct: 145 IFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIM 204
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
IE G +P+ +IS CK G EA ++ EK P SVV + +
Sbjct: 205 IEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATP--SVVTYNVM-------- 254
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
G A+K +I+ A+ +M +G P + S
Sbjct: 255 ----------IHGYAKKGSIRE----------------AERFRKEMEKKGFVPDVYTYAS 288
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
++ + G + A+++ + M+ RG +P+V YT L+SG A G+ E A ++ ++ K
Sbjct: 289 LVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLK 346
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 131/331 (39%), Gaps = 36/331 (10%)
Query: 194 VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWS 253
V V N +I + K K A E N G Y C + TY ++ L ++ A
Sbjct: 205 VPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARD 264
Query: 254 VCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC 313
+ M G LP+ ++ +CK G KEA V L + + P LI+ LC
Sbjct: 265 LLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLC 324
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
E ++ A + D+ + ++++I + A LL +M +G P
Sbjct: 325 NEGR-IEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNA 383
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM--------- 424
N ++ Y K G M A + M G PD TY L++GY G M
Sbjct: 384 VTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDE 443
Query: 425 --------------------------EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
EEA ++L+ A+K + V+Y TLI GY K
Sbjct: 444 MGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGN 503
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
D ALKL +EMK+ + P+ YN +I LC
Sbjct: 504 VDRALKLWDEMKEKEIIPSTVTYNCIIGGLC 534
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 162/382 (42%), Gaps = 39/382 (10%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ +C+ +E + L D ++ + K + V N LI + K AF++
Sbjct: 317 NMLINGLCNEGRIEEAFKLRDEMENL----KLLPDVVSYNTLINGCLEWSKISEAFKLLE 372
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ + G N T+ ++ + D A + KM E+G PD +I+ +CK G
Sbjct: 373 EMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAG 432
Query: 282 KAKEAH--------------------VVYTLAREKKMYPPQSVVA------FLISSLCQ- 314
EA ++ TL REKK+ +++ + I +
Sbjct: 433 NMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYG 492
Query: 315 -------EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
+D V AL + D+ + + ++ +I LC+ A + L++++
Sbjct: 493 TLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLES 552
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P +N+++ Y + GD+ A + M KPDV+T L+ G G +E+A
Sbjct: 553 GLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKA 612
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
++ N + VTY+TLI CK D A LL+EM++ + P+ YN +I +
Sbjct: 613 LKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITA 672
Query: 488 LCLKALDWRTAEKLLEDMRLKG 509
L + R AE+ + M KG
Sbjct: 673 LT-DSGRIREAEEFMSKMLEKG 693
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 120/262 (45%), Gaps = 11/262 (4%)
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ--EDETVKLA 322
P + I + + G+ A ++ + ++ P L++SL + +V +
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192
Query: 323 LDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+ +D A K I P F+ VI C A L+ M P N +N+
Sbjct: 193 REAFND----AIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNT 248
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
++ K G + A ++L M+SRGL P+ TY L+ GY G ++EA ++ +N+
Sbjct: 249 ILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNN 308
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
TY+ LI G C + A KL +EM+++ + P+V YN LI CL+ A
Sbjct: 309 LLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLING-CLEWSKISEA 367
Query: 499 EKLLEDMRLKGLHLNGITRALI 520
KLLE+M KG+ N +T ++
Sbjct: 368 FKLLEEMSEKGVKPNAVTHNIM 389
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 110/295 (37%), Gaps = 44/295 (14%)
Query: 146 GENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIA 205
G +V +FK G VD LK LWD E+ EKE TV N +I
Sbjct: 492 GTLIVGYFK---DGNVDRALK-------------LWD---EMKEKEIIPSTV-TYNCIIG 531
Query: 206 LFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLP 265
+ GK + A N+ + G + ++ TY + R + A+ KM+E P
Sbjct: 532 GLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKP 591
Query: 266 DSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDM 325
D ++ C G ++A ++ K LI+SLC+E + A ++
Sbjct: 592 DVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGR-LDDAFNL 650
Query: 326 LDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV---------- 375
L + + ++++I +L + A+ +SKM+ +G P +
Sbjct: 651 LSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVT 710
Query: 376 -------------FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
++ I G AM + + +G+ D TY LM G
Sbjct: 711 SETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDG 765
>gi|255660856|gb|ACU25597.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 418
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 171/391 (43%), Gaps = 57/391 (14%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L++ + S GK A++ + E K + + + + L+ + + G + A + F
Sbjct: 34 SLIRVVVSRKGKDSTSAVFAAILE--TKGTQISDLYVFSGLMLAYLESGFVRDAIQCFRL 91
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ +T +E L + + F W ++++E G P ++ FCK G+
Sbjct: 92 TKKHKIWVPFDTCRKVLEHLMKLRYFRLVWGFYKEILECGYPPSLYFFNILMHRFCKEGE 151
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAF----------------------------------- 307
+ A +V+ + + P SVV+F
Sbjct: 152 MRLAQMVFDAITKWSLRP--SVVSFNTLMNGYIRLGDLDEGFRLKSAMHATGVQPDVYTY 209
Query: 308 --LISSLCQE---DETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAK 358
LI+ LC+E DE ++ +MLD+ + P F+++I C+ V A
Sbjct: 210 SVLINGLCKESKMDEANEMLNEMLDN--------GLVPNGVTFTTLIDGHCKNGKVDLAM 261
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+ +M+S+G P +N++I + GD+ A ++++ M +GLKPD TYT L+ G
Sbjct: 262 EIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDKITYTTLIDGS 321
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G +E E+ + + RL VTY LI G C+ A K+L EM VG++P+
Sbjct: 322 CKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLREMLTVGLKPDN 381
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
Y ++ C K D +TA KLL +M+ G
Sbjct: 382 GTYTMIMNEFC-KTGDVKTASKLLREMQRNG 411
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 96/176 (54%), Gaps = 1/176 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F+ ++ C+ ++ A+ + + P FN++++ Y + GD+ + M
Sbjct: 139 FNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 198
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+ G++PDVYTY+ L++G +M+EA E+LNE N + VT+ TLI G+CK + D
Sbjct: 199 ATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGHCKNGKVD 258
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A+++ +M G P++ YN LI LC + D A L+E+M +KGL + IT
Sbjct: 259 LAMEIYKQMLSQGFLPDLITYNTLIYGLCRRG-DLGQARDLVEEMIMKGLKPDKIT 313
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 129/299 (43%), Gaps = 2/299 (0%)
Query: 180 LWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI 239
+W KEI E ++ N L+ F K G+ + A VF+ + + ++ +
Sbjct: 120 VWGFYKEILECGYPP-SLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLM 178
Query: 240 EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
R D + + M TG PD +I+ CK K EA+ + + +
Sbjct: 179 NGYIRLGDLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLV 238
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P LI C+ + V LA+++ + + ++++I LCR D+ A+
Sbjct: 239 PNGVTFTTLIDGHCKNGK-VDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARD 297
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
L+ +MI +G P + ++I K GD+ E+ K M ++ D TYT L+SG
Sbjct: 298 LVEEMIMKGLKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLC 357
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G+ +A ++L E + TY ++ +CK + A KLL EM+ G P V
Sbjct: 358 REGRAGDAEKMLREMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLREMQRNGPVPGV 416
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 103/219 (47%), Gaps = 3/219 (1%)
Query: 299 YPPQ-SVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGA 357
YPP L+ C+E E ++LA + D + + + ++ F++++ R+ D+
Sbjct: 132 YPPSLYFFNILMHRFCKEGE-MRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGDLDEG 190
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
L S M + G P ++ +I+ K M A EML M GL P+ T+T L+ G
Sbjct: 191 FRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDG 250
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
+ G+++ A EI + +TY+TLI G C+ + A L+ EM G++P+
Sbjct: 251 HCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPD 310
Query: 478 VDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
Y LI C K D +L + M + + L+ +T
Sbjct: 311 KITYTTLIDGSC-KEGDLEITFELRKRMIRENIRLDEVT 348
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 1/208 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K K A E+ N+ D G V N T+ I+ + D A + ++M+ G
Sbjct: 212 LINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQG 271
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
LPD +I C+ G +A + K + P + LI C+E + +++
Sbjct: 272 FLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDKITYTTLIDGSCKEGD-LEIT 330
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++ E + ++++I LCR A+ +L +M++ G P N + +++
Sbjct: 331 FELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLREMLTVGLKPDNGTYTMIMNE 390
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ K GD+ A ++L+ M+ G P V T
Sbjct: 391 FCKTGDVKTASKLLREMQRNGPVPGVVT 418
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 80/188 (42%), Gaps = 30/188 (15%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS-EGPPPGNAVFNSVISAYSKAGDMTPAM 393
++ + + ++I LC + + AK+L+ ++S +G +AVF +++ +K ++
Sbjct: 10 RHTLHSYCTMIHFLCTHQMLVEAKSLIRVVVSRKGKDSTSAVFAAILE--TKGTQIS--- 64
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
D+Y ++GLM Y G + +A + KK+ + T ++
Sbjct: 65 -------------DLYVFSGLMLAYLESGFVRDAIQCFRLTKKHKIWVPFDTCRKVLEHL 111
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
KL F E+ + G P++ +N L+ C + +MRL + +
Sbjct: 112 MKLRYFRLVWGFYKEILECGYPPSLYFFNILMHRFCKEG-----------EMRLAQMVFD 160
Query: 514 GITRALIR 521
IT+ +R
Sbjct: 161 AITKWSLR 168
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 145/335 (43%), Gaps = 8/335 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
++ + ++C KE +D + G K V +L+ ++ G +FN
Sbjct: 336 NSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHG----YAAEGYVVDMLNLFN 391
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G VA+ Y I+A +R + D A + +M E G +PD+ G +I+ F + G
Sbjct: 392 SMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMG 451
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDF--SGEARKYAIK 339
+ +A + + P V LI C VK A +++ + G R +
Sbjct: 452 RLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVK-AKELISEMMSRGIPRPNTVF 510
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
F+S+I SLC+ V A+ + +I G P FNS+I Y G M A +L M
Sbjct: 511 -FNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAM 569
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
S G++PDV TY+ L+ GY G++++ + E + + +TY ++ G
Sbjct: 570 ISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRT 629
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
A K+ +EM + G ++ ++ LC D
Sbjct: 630 VGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCD 664
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 148/338 (43%), Gaps = 10/338 (2%)
Query: 158 SGVVDALLKAICSSV---GKKEVYALWD-IVKEIGEKEKGVLTVEILNELIALFSKLGKG 213
+G + AL +A S+ G AL++ I +E + TV N L+ + +
Sbjct: 76 NGFLTALARAPSSATCRDGPSLAVALFNRICREEARPRVALPTVCTYNILMDCCCRAHRP 135
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC-EKMIETGSLPDSEKVGK 272
F +F +F G + ++ L K D A +V +M E G PD+
Sbjct: 136 TVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYST 195
Query: 273 IISWFCKGGKAKEA-HVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDF 329
++ C+ +++ A +++T+ ++ P +VV++ +I +E E K A ++ +
Sbjct: 196 VLKSLCEDSRSQRALDLLHTMVKKSGGCSP-NVVSYNTVIHGFFREGEVSK-ACNLFHEM 253
Query: 330 SGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
+ + +SS I +LC+ + + A+ +L +MIS G P +N +I YS G
Sbjct: 254 MQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQW 313
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
M + M RGL PD++T MS G+ +EA E + + VTY L
Sbjct: 314 KETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVL 373
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
+ GY L L N M+ G+ + YN LI +
Sbjct: 374 LHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDA 411
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 152/340 (44%), Gaps = 4/340 (1%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+ N LI + K G A +F + + G + + TY I A SR A +M
Sbjct: 404 VYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQM 463
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVV-AFLISSLCQEDE 317
I G PD+ +I FC G +A + + + + P +V +I+SLC+E
Sbjct: 464 IAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGR 523
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
V+ A D+ D + + F+S+I + + A +L MIS G P ++
Sbjct: 524 VVE-AQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYS 582
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+++ Y + G + + + + M S+G+KP TY ++ G N G+ A ++ +E ++
Sbjct: 583 ALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIES 642
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
+ + T ++ G C+ D A+ L ++ + V+ N+ N +I ++ K
Sbjct: 643 GTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAM-YKVRKREE 701
Query: 498 AEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIENGEAL 537
A +L + + GL N T ++ L+E ++E + +
Sbjct: 702 ANELFDSISATGLVPNASTYGVM-ITNLLKEGSVEEADNM 740
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 9/211 (4%)
Query: 304 VVAFLISSLC---QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTL 360
V L+ LC + D+ V + L + + E + +S+V++SLC A L
Sbjct: 156 VANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTIS---YSTVLKSLCEDSRSQRALDL 212
Query: 361 LSKMI--SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
L M+ S G P +N+VI + + G+++ A + M +G+ PDV TY+ +
Sbjct: 213 LHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDAL 272
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
M++A +L + N VTY+ +I GY L ++ + EM G+ P++
Sbjct: 273 CKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDI 332
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
N + SLC K + A + + M KG
Sbjct: 333 FTCNSYMSSLC-KHGKSKEAAEFFDSMAAKG 362
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 98/252 (38%), Gaps = 1/252 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N +I K G+ A ++F+ G + T+ I+ + A+ V + MI
Sbjct: 511 FNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMI 570
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
G PD ++ +C+ G+ + +++ K + P ++ L + TV
Sbjct: 571 SVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTV 630
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
A M + I ++ LCR A L K+ + A+ N++
Sbjct: 631 G-AKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTM 689
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I A K A E+ + + GL P+ TY +++ G +EEA + + +K+
Sbjct: 690 IDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGC 749
Query: 440 RLSPVTYHTLIR 451
S + +IR
Sbjct: 750 APSSRLLNNIIR 761
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 148/308 (48%), Gaps = 2/308 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +IA K G A ++F++ + V N TY I+ ++ + + + +M+
Sbjct: 192 NVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLR 251
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ ++S C+ G+ E V +KM P + L + ++
Sbjct: 252 HGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQT 311
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
+ L + ++ + K S ++ LC+ + A+ +L +++ G ++N++I
Sbjct: 312 M-LSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLI 370
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ Y + GD+ A + + M+SR ++PD TY L++G ++ EA +++ E +KN
Sbjct: 371 NGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVN 430
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
S T++TLI Y + + + +L++M++ G++PNV Y ++ + C K A
Sbjct: 431 PSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFC-KNGKILEAVA 489
Query: 501 LLEDMRLK 508
+L+DM +K
Sbjct: 490 ILDDMFIK 497
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 123/293 (41%), Gaps = 36/293 (12%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
T I N LI + ++G + AF +F + + TY I L + + A +
Sbjct: 362 TTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLV 421
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+M + G P E +I + + G+ ++ ++ + +EK + P +VV++
Sbjct: 422 IEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKP--NVVSY-------- 471
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
S++ + C+ + A +L M + PG V
Sbjct: 472 --------------------------GSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQV 505
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N++I AY + G A + + M+S G+ P + TY L+ G Q+ EA E+L+ +
Sbjct: 506 YNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLR 565
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
++Y+TLI C D AL+L EM G++P+ Y L SL
Sbjct: 566 NYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSL 618
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 154/363 (42%), Gaps = 52/363 (14%)
Query: 178 YALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYF 237
+ LW + G K V+T +L + ++G+ A V ++ V + TY
Sbjct: 243 FRLWSQMLRHGLKPN-VITYNVLLSGLCRAGRMGETAA---VLDEMASRKMVPDGFTYSI 298
Query: 238 TIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKK 297
+ SR S+ E+ ++ G + +++ CK GK +A V
Sbjct: 299 LFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSG 358
Query: 298 MYPPQSVVAFLISSLCQEDETVKLALDMLDDFS--GEARKYAIKP----FSSVIRSLCRM 351
+ + LI+ CQ D+ FS + + I+P ++++I L ++
Sbjct: 359 LLQTTVIYNTLINGYCQIG-------DLEGAFSIFQQMKSRLIRPDHITYNALINGLGKV 411
Query: 352 KDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTY 411
+ + A L+ +M G P FN++I AY +AG + +L M+ +GLKP+V +Y
Sbjct: 412 ERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSY 471
Query: 412 TGLMSGYANGGQMEEACEILNE--------------------------------AKKNHS 439
+++ + G++ EA IL++ A+K S
Sbjct: 472 GSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKS 531
Query: 440 RLSP---VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
P VTY+ LI+G CK + A +LL+ +++ G+ P+V YN LI + C ++ R
Sbjct: 532 SGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDR 591
Query: 497 TAE 499
E
Sbjct: 592 ALE 594
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 116/284 (40%), Gaps = 3/284 (1%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI K+ + A ++ + G + ET+ I+A R + + + M E
Sbjct: 402 NALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQE 461
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ G I++ FCK GK EA + K + P V +I + + T +
Sbjct: 462 KGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQ 521
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A + + +I ++ +I+ LC+ + A+ LL + + G P +N++I
Sbjct: 522 -AFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLI 580
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
SA + A+E+ K M G+KP TY L S G++ E + +
Sbjct: 581 SACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVV 640
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
Y+ ++ Y K E L EM D G+ V +Y +
Sbjct: 641 PCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGIA--VGDYTSM 682
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 87/172 (50%), Gaps = 5/172 (2%)
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK-PDV 408
R DV GA LL ++ P +N + A AGD+ A+ ML+ M G P+
Sbjct: 132 RHADVRGAFELL---VAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNA 188
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNE 468
++Y +++G G +A ++ +E + + +TY+T+I G+ K + + +L ++
Sbjct: 189 FSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQ 248
Query: 469 MKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
M G++PNV YN L+ LC TA +L++M + + +G T +++
Sbjct: 249 MLRHGLKPNVITYNVLLSGLCRAGRMGETA-AVLDEMASRKMVPDGFTYSIL 299
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 1/170 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++ VI L + A L +M + P + +N++I + K GD+ + M
Sbjct: 191 YNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQML 250
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
GLKP+V TY L+SG G+M E +L+E TY L G+ + +
Sbjct: 251 RHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQ 310
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
L L E GV+ + L+ LC K AE++L+ + GL
Sbjct: 311 TMLSLFEESVKKGVKIGAYTCSILLNGLC-KDGKISKAEEVLQTLVNSGL 359
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 89/226 (39%), Gaps = 10/226 (4%)
Query: 190 KEKGV-LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
+EKG+ V ++ F K GK A + + + + Y I+A
Sbjct: 460 QEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGST 519
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
D A+ + EKM +G P +I CK + EA + R + P L
Sbjct: 520 DQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTL 579
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKM 364
IS+ C T D + E K IKP + + SL VH + L +M
Sbjct: 580 ISACCYRSNT-----DRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQM 634
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ + P + ++N ++ AY+K G+ + + K M +G+ YT
Sbjct: 635 LDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGIAVGDYT 680
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 159/331 (48%), Gaps = 13/331 (3%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGE-KEKGV-LTVEILNELIALFSKLGKGKAAF 217
+ DA K CSS D ++ + E +EKGV T+ N +I K G+ + A
Sbjct: 351 LADACFKCRCSS----------DALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGAL 400
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
NK D G + TY I A + A+++ ++M+ G D+ + ++
Sbjct: 401 GCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNL 460
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
CK + +EA + ++ P + ++++ +E + + AL + D+ + +
Sbjct: 461 CKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNS-EPALRLWDEMIEKKLTPS 519
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
I ++++I+ L RM + A L++++ +G P + +N +I AY K GD+ A +
Sbjct: 520 ISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHN 579
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M KPDV T LM+G G++++A ++ + ++ +TY+TLI+ CK
Sbjct: 580 KMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDG 639
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ D AL +M+ G+QP+ YN ++ +L
Sbjct: 640 DVDTALHFFADMEARGLQPDAFTYNVVLSAL 670
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 122/256 (47%), Gaps = 38/256 (14%)
Query: 297 KMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHG 356
+++P L+ + C + T+ AL L G +++++ + CR +
Sbjct: 199 RLHPNHYTFNLLVHTHCSKG-TLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGE 257
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A+ LL++M +G P +N+++SAY++ G + A ++++ M + G +PD++TY L +
Sbjct: 258 ARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAA 317
Query: 417 GYANGGQMEE------------------------------------ACEILNEAKKNHSR 440
G G+++E A +L E ++ +
Sbjct: 318 GLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVK 377
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+ VT++ +I+G CK E + AL LN+M D G+ P+V YN LI + C KA + A
Sbjct: 378 ATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHC-KAGNIAKAYT 436
Query: 501 LLEDMRLKGLHLNGIT 516
L+++M +GL L+ T
Sbjct: 437 LMDEMVRRGLKLDTFT 452
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 124/288 (43%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+ + G A + + G + TY + A +R A V E M
Sbjct: 243 NTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTA 302
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD + + C+ GK EA + P V ++ C +
Sbjct: 303 NGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSS 362
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
AL +L++ + K + + VI+ LC+ ++ GA L+KM +G P +N++I
Sbjct: 363 DALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLI 422
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
A+ KAG++ A ++ M RGLK D +T ++ + EEA +L +
Sbjct: 423 HAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFM 482
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
V+Y T++ Y K + AL+L +EM + + P++ YN LI+ L
Sbjct: 483 PDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGL 530
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 127/299 (42%), Gaps = 2/299 (0%)
Query: 191 EKGVLTVEI-LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
++G + E+ ++A + K + A ++++ + + TY I+ LSR
Sbjct: 478 QRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLK 537
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A +++E G +PD II +CK G + A + E P L+
Sbjct: 538 EAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLM 597
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
+ LC + K AL + + + + +K + ++++I+++C+ DV A + M + G
Sbjct: 598 NGLCLNGKLDK-ALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGL 656
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
P +N V+SA S+AG A ML + G ++ L + + + +
Sbjct: 657 QPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAK 716
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
E +N + Y L+ G C +F A +L+EM G+ + Y L++ L
Sbjct: 717 TEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGL 775
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 147/335 (43%), Gaps = 24/335 (7%)
Query: 189 EKEKGVLTVEILNELIAL--FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRK 246
E ++G L ++ I + F K G + A + FN+ + GC N TY I A + K
Sbjct: 508 EMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK 567
Query: 247 IFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVA 306
+A + E M+ G LP+ +I CK G+ ++A ++ K P
Sbjct: 568 KVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVP------ 621
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
V + DD + + + + +++ C+ V A+ LL M
Sbjct: 622 -----------DVDMYFKQYDD---NSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSM 667
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
EG P V++++I K G + A E+ M G +YTY+ L+ Y + +
Sbjct: 668 EGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDL 727
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A ++L++ +N + V Y +I G CK+ + D A KL+ M++ G QPNV Y +I
Sbjct: 728 ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 787
Query: 487 SLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALI 520
+ T +LLE M KG+ N +T R LI
Sbjct: 788 GFGMIG-KIETCLELLERMGSKGVAPNYVTYRVLI 821
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 129/305 (42%), Gaps = 23/305 (7%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + K K A E+F GC+ N TY I+ + + A + E+M +
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 618
Query: 263 SLPD-----------SEK-----VGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVA 306
+PD SE+ G ++ FCK + +EA + + P Q V
Sbjct: 619 DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 678
Query: 307 FLISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSK 363
LI LC+ DE ++ +M S + +SS+I ++K A +LSK
Sbjct: 679 ALIDGLCKVGKLDEAQEVKTEM----SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSK 734
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
M+ P ++ +I K G A +++++M +G +P+V TYT ++ G+ G+
Sbjct: 735 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK 794
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
+E E+L + VTY LI CK D A LL EMK + Y K
Sbjct: 795 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRK 854
Query: 484 LIQSL 488
+I+
Sbjct: 855 VIEGF 859
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 134/330 (40%), Gaps = 6/330 (1%)
Query: 181 WDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIE 240
W + E E V +LI+ + + A + N+ C+ N TY +
Sbjct: 286 WREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLC 345
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP 300
+K V M+ G P + ++ +C G A+ + + P
Sbjct: 346 GCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMP 405
Query: 301 PQSVVAFLISSLCQEDETVKL-ALDMLDDFSGEARKYAIK----PFSSVIRSLCRMKDVH 355
V LI S+C + +++ LD+ + E + SS R LC
Sbjct: 406 GYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYE 465
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
A +++ +MI +G P + ++ V++ A M A + + M+ GL DVYTYT ++
Sbjct: 466 KAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMV 525
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
+ G +E+A + NE ++ + VTY LI Y K ++ A +L M G
Sbjct: 526 DSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCL 585
Query: 476 PNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
PN+ Y+ LI C KA A ++ E M
Sbjct: 586 PNIVTYSALIDGHC-KAGQVEKACQIFERM 614
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 136/335 (40%), Gaps = 12/335 (3%)
Query: 156 VTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKA 215
VT G ALL C S +E L D + G + + + + LI K+GK
Sbjct: 640 VTYG---ALLDGFCKSHRVEEARKLLDAMSMEGCEPNQI----VYDALIDGLCKVGKLDE 692
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A EV + ++G A TY I+ + K D A V KM+E P+ ++I
Sbjct: 693 AQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMID 752
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
CK GK EA+ + + EK P +I + ++ L++L+ +
Sbjct: 753 GLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK-IETCLELLERMGSKGVA 811
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+ +I C+ + A LL +M P A + VI ++K + ++ +
Sbjct: 812 PNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGL 869
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV--TYHTLIRGY 453
L + P + Y L+ ++E A +L E + L TY++LI
Sbjct: 870 LDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESL 929
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
C + + A +L +EM GV P + + LI+ L
Sbjct: 930 CLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGL 964
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
E L + + + + + L+R +C+ F AL+ L +KD +P+ YN LIQ+
Sbjct: 186 EFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAF 245
Query: 489 CLKALDWRTAEKLLEDMRLKGLHLNGIT 516
LKA +A + +M L L ++G T
Sbjct: 246 -LKADRLDSASLIHREMSLANLRMDGFT 272
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 4/141 (2%)
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
N ++ + + G + A+E L ++ +P TY L+ + +++ A I E
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+ R+ T CK+ ++ AL L+ V P+ Y KLI LC +L +
Sbjct: 263 LANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFV---PDTVFYTKLISGLCEASL-F 318
Query: 496 RTAEKLLEDMRLKGLHLNGIT 516
A L MR N +T
Sbjct: 319 EEAMDFLNRMRATSCLPNVVT 339
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 160/346 (46%), Gaps = 8/346 (2%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+ C + +E + L + ++++G + V + + LI+ F G + E+FN+
Sbjct: 204 ALIDGFCKNGDVEEGFGLLEEMEKMGLEGD----VFVYSALISGFCSKGDIERGKELFNE 259
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
N TY + AL +++ + A + + M PD + K G+
Sbjct: 260 MLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGR 319
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
A +A V L ++ P +I+ LC+E V AL +L+ + + +K + +S
Sbjct: 320 ASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGR-VDDALGILETMAKKGKKPDVVTYS 378
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISE--GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++++ LC + + A LL+ ++S+ P FN VI K + A + M
Sbjct: 379 TLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMV 438
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
RG ++ TY L+ GY + G++ +A E+ +A + + TY LI G CK++
Sbjct: 439 ERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLS 498
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
A L N+ + G +P V EYN L+ SLC ++ A L ++MR
Sbjct: 499 IAKGLFNKKRASGTRPTVSEYNTLMASLCRES-SVEQARNLFQEMR 543
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 139/283 (49%), Gaps = 18/283 (6%)
Query: 227 GCVANQETYYFTI--EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAK 284
GC + +T+ + LS+ A V + M++ G P++ II+ CK G+
Sbjct: 297 GCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVD 356
Query: 285 EA-HVVYTLAREKKMYPPQSVVAFLISSLC---QEDETVKLALDMLDDFSGEARKYAIKP 340
+A ++ T+A++ K P + L+ LC + DE V L L++L ++++ IKP
Sbjct: 357 DALGILETMAKKGK-KPDVVTYSTLVKGLCGVGKIDEAVDL-LNLL-----MSKEFHIKP 409
Query: 341 ----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
F+ VI+ LC+ + + AK + M+ G P +N +I Y AG +T A+E+
Sbjct: 410 DVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELW 469
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
K G+ P+ TYT L++G + A + N+ + + +R + Y+TL+ C+
Sbjct: 470 KDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRE 529
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
+ A L EM++ P+V +N +I LKA D +A+
Sbjct: 530 SSVEQARNLFQEMRNANHDPDVVSFNIIIDG-TLKAGDVESAK 571
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 128/281 (45%), Gaps = 8/281 (2%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
I+ L + K +D SV KM P + +I F K A V L ++
Sbjct: 66 IDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGVLGLIMKRGF 125
Query: 299 YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK---PFSSVIRSLCRMKDVH 355
+ L+ CQ ++ K A+D+ F R I +++VI LC+ K +
Sbjct: 126 HLNVYNFNLLLKGFCQSGDSHK-AMDL---FCMMKRNCLIPDCVSYNTVINGLCKGKRLV 181
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
AK L +M P + F+++I + K GD+ +L+ M GL+ DV+ Y+ L+
Sbjct: 182 EAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALI 241
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
SG+ + G +E E+ NE + + + VTY L+ CK +++ A ++L+ M V+
Sbjct: 242 SGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVR 301
Query: 476 PNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
P+V Y L L K A K+L+ M +G N +T
Sbjct: 302 PDVVAYTVLADGLS-KNGRASDAIKVLDLMVKRGEEPNNVT 341
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 124/290 (42%), Gaps = 1/290 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
L+ LI F K AF V G N + ++ + A + M
Sbjct: 97 LSALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMK 156
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+PD +I+ CKG + EA ++ + + P + LI C+ + V
Sbjct: 157 RNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGD-V 215
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
+ +L++ + + +S++I C D+ K L ++M+ + P ++ +
Sbjct: 216 EEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCL 275
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
++A K A +ML M ++PDV YT L G + G+ +A ++L+ K
Sbjct: 276 MNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGE 335
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ VTY+ +I G CK D AL +L M G +P+V Y+ L++ LC
Sbjct: 336 EPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLC 385
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 145/377 (38%), Gaps = 42/377 (11%)
Query: 154 KWVTSGVV--DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLG 211
K VT VV L+ A+C KE + D + + V + + L SK G
Sbjct: 263 KNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGL----SKNG 318
Query: 212 KGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVG 271
+ A +V + G N TY I L + D A + E M + G PD
Sbjct: 319 RASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYS 378
Query: 272 KIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDE------------ 317
++ C GK EA + L K+ + V AF +I LC++
Sbjct: 379 TLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMV 438
Query: 318 ----------------------TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVH 355
+ AL++ D ++ +I LC+M+ +
Sbjct: 439 ERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLS 498
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
AK L +K + G P + +N+++++ + + A + + MR+ PDV ++ ++
Sbjct: 499 IAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIII 558
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
G G +E A E+L E + +T+ LI + KL + D A L M G
Sbjct: 559 DGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHV 618
Query: 476 PNVDEYNKLIQSLCLKA 492
P+ ++ L++ LK
Sbjct: 619 PDAVLFDSLLKGYSLKG 635
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 84/185 (45%), Gaps = 3/185 (1%)
Query: 326 LDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSK 385
L D+ Y+ +++I +L + K ++ SKM S P +++I ++
Sbjct: 49 LQDYPNSIPSYS--SCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVN 106
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
+ A +L L+ RG +VY + L+ G+ G +A ++ K+N V+
Sbjct: 107 TQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVS 166
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
Y+T+I G CK + A +L EMK +PN ++ LI C K D LLE+M
Sbjct: 167 YNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFC-KNGDVEEGFGLLEEM 225
Query: 506 RLKGL 510
GL
Sbjct: 226 EKMGL 230
>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
Length = 590
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 134/292 (45%), Gaps = 3/292 (1%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
+IL+ L+ ++ + A +VF +G + + +L++ ++ + W V +K
Sbjct: 128 QILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKK 187
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M+ G +P+ +I CK G ++A + + ++P LIS C++
Sbjct: 188 MVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGM 247
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
+ AL + D I ++S+I CR + A L ++ G P + +
Sbjct: 248 HYE-ALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHVTYT 304
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
++I Y + D+ A+ + ++M GL P V TY ++ G++++A +LNE +
Sbjct: 305 TLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSER 364
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
VT +TLI YCK+ + A+K+ +M + G++P+ + LI C
Sbjct: 365 KVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFC 416
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 153/332 (46%), Gaps = 7/332 (2%)
Query: 180 LWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI 239
+W + K++ + V + I N LI K G + A ++ N+ + TY I
Sbjct: 181 VWKVYKKM-VRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLI 239
Query: 240 EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
++ + A + ++M G PD +I FC+ G+ +EA L RE
Sbjct: 240 SLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREA---LRLFREINGA 296
Query: 300 PPQSVV-AFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
P V LI C+ ++ ++ AL + + E + ++S++R LC + A
Sbjct: 297 TPNHVTYTTLIDGYCRVND-LEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDAN 355
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
LL++M P N N++I+AY K GDM AM++ K M GLKPD +T+ L+ G+
Sbjct: 356 RLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGF 415
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
+++ A E L E S TY L+ Y + + ++L +E+ G+ ++
Sbjct: 416 CKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDI 475
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
Y LI+ LC K +AE++ M+ KG+
Sbjct: 476 SVYRALIRRLC-KIDKIESAERIFTLMQGKGM 506
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 104/210 (49%), Gaps = 10/210 (4%)
Query: 334 RKYAIKPF----SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
R + KP + ++ SL + + + + KM+ G P +FN +I A K+GD+
Sbjct: 154 RVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDV 213
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
A ++L M SR + PD++TY L+S Y G EA I + ++ VTY++L
Sbjct: 214 EKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSL 273
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
I G+C+ AL+L E+ G PN Y LI C + D A +L E M ++G
Sbjct: 274 IYGFCREGRMREALRLFREIN--GATPNHVTYTTLIDGYC-RVNDLEEALRLREVMEVEG 330
Query: 510 LHLNGIT-RALIRAVKELEEDAIENGEALV 538
LH +T +++R K EE I++ L+
Sbjct: 331 LHPGVVTYNSILR--KLCEEGKIKDANRLL 358
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 119/307 (38%), Gaps = 54/307 (17%)
Query: 191 EKGVLTVEIL--NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
E+G ++ +I+ N LI F + G+ + A +F + G N TY I+ R
Sbjct: 259 ERGGVSPDIVTYNSLIYGFCREGRMREALRLFREIN--GATPNHVTYTTLIDGYCRVNDL 316
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
+ A + E M G P I+ C+ GK K+A+ + E+K+ P L
Sbjct: 317 EEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTL 376
Query: 309 ISSLCQEDE---TVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLL 361
I++ C+ + +K+ ML+ +KP F ++I C++ +V AK L
Sbjct: 377 INAYCKIGDMGSAMKVKKKMLEA--------GLKPDQFTFKALIHGFCKLHEVDSAKEFL 428
Query: 362 SKMISEGPPPGNAVFNSVISAY-----------------------------------SKA 386
+M+ G P + ++ ++ +Y K
Sbjct: 429 FEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKI 488
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
+ A + LM+ +G+K D YT L Y G+ A ++L+E K ++ Y
Sbjct: 489 DKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIY 548
Query: 447 HTLIRGY 453
Y
Sbjct: 549 RCFSASY 555
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 100/241 (41%), Gaps = 4/241 (1%)
Query: 184 VKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALS 243
V E+ GV+T N ++ + GK K A + N+ + + T I A
Sbjct: 325 VMEVEGLHPGVVT---YNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYC 381
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS 303
+ A V +KM+E G PD +I FCK + A + P S
Sbjct: 382 KIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYS 441
Query: 304 VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSK 363
++L+ S +D + + + D+ S + I + ++IR LC++ + A+ + +
Sbjct: 442 TYSWLVDSYYDQDNK-EAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTL 500
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
M +G + V+ S+ AY KAG A +ML M R L + Y + YA G
Sbjct: 501 MQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGS 560
Query: 424 M 424
+
Sbjct: 561 I 561
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 135/285 (47%), Gaps = 12/285 (4%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL-PDSEK 269
G+ A + ++ + G +Q TY ++ + + A ++ KM E + P+
Sbjct: 196 GRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVI 255
Query: 270 VGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE---TVKLALDML 326
II CK G+ ++H ++ ++K ++P +I C +L +ML
Sbjct: 256 YSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEML 315
Query: 327 DDFSGEARKYA--IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
+ RK + + ++++I + + A L +M+ G P +NS+I +
Sbjct: 316 E------RKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFC 369
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV 444
K + A +M LM ++G PDV+T+T L+ GY ++++ E+L+E + + V
Sbjct: 370 KQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTV 429
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
TY+TLI G+C + + + AL L +M GV P++ N L+ LC
Sbjct: 430 TYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLC 474
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 130/304 (42%), Gaps = 12/304 (3%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V I + +I K G+ + +F + D G N TY I + A + +
Sbjct: 253 VVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQ 312
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M+E P+ +I+ F K GK EA +Y + + P +I C++D
Sbjct: 313 EMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQD 372
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ A DM + + + F+++I C K + LL +M G +
Sbjct: 373 R-LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTY 431
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N++I + GD+ A+++ + M S G+ PD+ T L+ G + G++++A E+ +K
Sbjct: 432 NTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQK 491
Query: 437 NHSRLSP-----------VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
+ L +TY+ LI G +F A +L EM G+ P+ Y+ +I
Sbjct: 492 SKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 551
Query: 486 QSLC 489
LC
Sbjct: 552 DGLC 555
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 122/277 (44%), Gaps = 7/277 (2%)
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP 300
A+ R + D S+ +KM D +I FC K A + + ++P
Sbjct: 90 AVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHP 149
Query: 301 PQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTL 360
L+ LC D V ALD+ + + F++++ LCR V A L
Sbjct: 150 DVVTFTTLLHGLCL-DHRVSEALDLFHQIC----RPDVLTFTTLMNGLCREGRVVEAVAL 204
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS-RGLKPDVYTYTGLMSGYA 419
L +M+ G P + + + K GD A+ +L+ M +KP+V Y+ ++ G
Sbjct: 205 LDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLC 264
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
G+ ++ + E + + VTY+ +I G+C + A +LL EM + + PNV
Sbjct: 265 KDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVV 324
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
YN LI + +K + A +L ++M +G+ N IT
Sbjct: 325 TYNALINAF-VKEGKFFEAAELYDEMLPRGIIPNTIT 360
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 117/292 (40%), Gaps = 26/292 (8%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
E+ ++ G VAN TY I + A + ++MI +G PD ++
Sbjct: 412 GMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 471
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
C GK K+A ++ ++ KM LD F+G
Sbjct: 472 GLCDNGKLKDALEMFKAMQKSKM-----------------------DLDASHPFNGVEPD 508
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+ ++ +I L A+ L +M G P ++S+I K + A +M
Sbjct: 509 --VLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 566
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
M S+ P+V T+ L++GY G++++ E+ E + + Y TLI G+ K
Sbjct: 567 FVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRK 626
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRL 507
+ + AL + EM GV P+ ++ K + A +LED+++
Sbjct: 627 VGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKE-ELERAVAMLEDLQM 677
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 9/168 (5%)
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+K + A L S M+ P P FN ++ A + + + + M + ++ D+Y+
Sbjct: 59 IKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYS 118
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
+T L+ + + ++ A + K VT+ TL+ G C AL L +++
Sbjct: 119 FTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI- 177
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAE--KLLEDMRLKGLHLNGIT 516
+P+V + L+ LC + R E LL+ M GL + IT
Sbjct: 178 ---CRPDVLTFTTLMNGLCREG---RVVEAVALLDRMVENGLQPDQIT 219
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 135/288 (46%), Gaps = 1/288 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I K G AFE+ GC + +Y + AL + ++ + KM
Sbjct: 267 NTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 326
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
P+ +I+ C+ GK +EA + L +EK + P LI++ C+E +
Sbjct: 327 EKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGR-LD 385
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
+A++ L+ + I +++V+ +LC+ A + K+ G P ++ +N++
Sbjct: 386 VAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMF 445
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
SA +GD A+ M+ M S G+ PD TY ++S G ++EA E+L + +
Sbjct: 446 SALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFH 505
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
S VTY+ ++ G+CK + A+ +L M G +PN Y LI+ +
Sbjct: 506 PSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 143/329 (43%), Gaps = 14/329 (4%)
Query: 184 VKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALS 243
V EI EK G V N LI F K+ + A V ++ + TY I +L
Sbjct: 146 VMEILEK-FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLC 204
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS 303
R D A V +++ P +I G EA + + + P
Sbjct: 205 SRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMF 264
Query: 304 VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSK 363
+I +C+E V A +M+ + + + + ++ ++R+L + L++K
Sbjct: 265 TYNTIIRGMCKEG-MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTK 323
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
M SE P ++ +I+ + G + AM +LKLM+ +GL PD Y+Y L++ + G+
Sbjct: 324 MFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGR 383
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
++ A E L + V Y+T++ CK + D AL++ ++ +VG PN YN
Sbjct: 384 LDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNT 443
Query: 484 LIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
+ +L W + +K ++ LH+
Sbjct: 444 MFSAL------WSSGDK------IRALHM 460
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 143/344 (41%), Gaps = 11/344 (3%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I GK A +V N+ C TY IEA D A + ++M+
Sbjct: 197 NIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS 256
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DE 317
G PD II CK G A + K P L+ +L + +E
Sbjct: 257 RGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEE 316
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
KL M E + +S +I +LCR + A LL M +G P ++
Sbjct: 317 GEKLMTKMF----SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYD 372
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+I+A+ + G + A+E L+ M S G PD+ Y +++ G+ ++A EI + +
Sbjct: 373 PLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEV 432
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
+ +Y+T+ + AL ++ EM G+ P+ YN +I LC + +
Sbjct: 433 GCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGM-VDE 491
Query: 498 AEKLLEDMRLKGLHLNGITRALIR---AVKELEEDAIENGEALV 538
A +LL DMR H + +T ++ EDAI E++V
Sbjct: 492 AFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMV 535
>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
Length = 733
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 146/321 (45%), Gaps = 3/321 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI- 259
N LI + L + + A E+ + GC ++ +YY + L + K + EKM+
Sbjct: 243 NCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLK 302
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
++ LPD + K G EA A E++ + + ++ S C+E
Sbjct: 303 DSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMD 362
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
K A +++++ + + ++SVI LC+ + V AK +L +M G P + ++
Sbjct: 363 K-AKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTAL 421
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
++ K G+ A EM+ + P+ TY+ LM G+ G+ EAC+++ E K
Sbjct: 422 LNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGF 481
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
+PV + LI+ C+ E+ D A + + + + G NV + +I C K D A
Sbjct: 482 FPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKD-DLEAAL 540
Query: 500 KLLEDMRLKGLHLNGITRALI 520
LL+DM L H + +T I
Sbjct: 541 SLLDDMYLSNKHPDVVTYTTI 561
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 136/287 (47%), Gaps = 3/287 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
++ F + G+ A E+ N+ GC+ + TY I L + + D A + +M + G
Sbjct: 351 IVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHG 410
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P++ +++ CK G + EA + ++ E P + L+ +E ++ + A
Sbjct: 411 CKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSE-A 469
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
D++ + + + +I+SLC+ + V AK + + ++ G F +VI
Sbjct: 470 CDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHG 529
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ + D+ A+ +L M PDV TYT ++ G++EEA ++ + + +
Sbjct: 530 FCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPT 589
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
PVTY T+I YC++ + LKLL +M + Q YN++I+ LC
Sbjct: 590 PVTYRTVIHQYCRMGRVEDLLKLLEKM--LSRQECRTAYNQVIEKLC 634
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 12/207 (5%)
Query: 301 PQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTL 360
P+ V A L Q DE V L D R I + +++ L + K GAK +
Sbjct: 101 PRQVCAVL---QLQTDERVALRFFYWADRQWRYRHDPI-VYYAMLEILSKTKLCQGAKRV 156
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
L M F V+ +YS+AG + AM L +M+ G++PD+ +
Sbjct: 157 LRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRXLTMMQKAGIEPDLSICNTAIHVLVM 216
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
G ++++A L + + +TY+ LI+GYC L + A +L+ EM G P+
Sbjct: 217 GNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKIS 276
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRL 507
Y ++ LC EK ++++RL
Sbjct: 277 YYTVMGFLC--------KEKRIKELRL 295
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 125/273 (45%), Gaps = 2/273 (0%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
TY I+ L + D A + +M++ G PD+ I+ CK GK + AH + +
Sbjct: 12 TYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVM 71
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
E+ P LIS LC++ + V A ++D+F + +S + LC+
Sbjct: 72 AERNCRPSCCTYNTLISGLCKQ-QNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGR 130
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
+ A L+ +M G P +N++I KA A E+L+ + S G PDV TYT
Sbjct: 131 IDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTI 190
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
++ G G++++A +++ K S +TY L+ G C+ D A + EM
Sbjct: 191 IVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKD 250
Query: 474 VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
+ Y L+ C K+ + A+K+++ +R
Sbjct: 251 CTADALAYVSLVNGYC-KSSRTKEAQKVVDGIR 282
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 123/288 (42%), Gaps = 4/288 (1%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI K K + A+E+ G V + TY ++ L + D A + E M++
Sbjct: 154 NTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLK 213
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P ++ C+ G+ EAH ++ K L++ C+ T K
Sbjct: 214 RGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRT-K 272
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A ++D G I +++++ C+ + + M G P +N V+
Sbjct: 273 EAQKVVDGIRGTPY---IDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVM 329
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
K G + A L+ M S G PDV +Y ++ G + +EA ++L++ +
Sbjct: 330 DGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIP 389
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
VTY+TL+ +CK E FD A+ +L M GV P+ YN LI L
Sbjct: 390 PDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGL 437
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 148/356 (41%), Gaps = 10/356 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ +C + ++ Y L + + G V I++ L K G+ A ++
Sbjct: 154 NTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGL----CKEGRLDKALKMVE 209
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
GC + TY +E L R D A + ++M+ D+ +++ +CK
Sbjct: 210 GMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSS 269
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ KEA V R P V L+ C+E ++ ++ +D + IK +
Sbjct: 270 RTKEAQKVVDGIRGT---PYIDVYNALMDGYCKEGRLDEIP-NVFEDMACRGCVPNIKTY 325
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+ V+ LC+ V A L M S G P +N +I KA A ++L M
Sbjct: 326 NIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQ 385
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+ PD TY LM+ + + ++A IL K VTY+TLI G +
Sbjct: 386 AGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGD 445
Query: 462 ALKLLNEMKDVG-VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A +L++EM G V YN +I LC + + A L++ M G+ N +T
Sbjct: 446 AYELMHEMLRNGCVVSACTTYNTIIDRLCKEGC-LKQALLLMDHMTGHGVEANTVT 500
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 87/189 (46%), Gaps = 3/189 (1%)
Query: 334 RKYA--IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
RK A + ++ +I LC+ A +L +M+ G P FNS++ KAG
Sbjct: 4 RKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFER 63
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
A +L +M R +P TY L+SG ++ A +++E + VTY L
Sbjct: 64 AHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILAD 123
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH 511
G CK D A +L+ EM G PN+ YN LI LC KA A +LLE + G
Sbjct: 124 GLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLC-KASKTEKAYELLETLVSSGFV 182
Query: 512 LNGITRALI 520
+ +T +I
Sbjct: 183 PDVVTYTII 191
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 141/307 (45%), Gaps = 7/307 (2%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I K K K A +V ++ G + TY + + + FD A + + MI+
Sbjct: 361 NIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIK 420
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAH-VVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
G PD+ +IS + + +A+ +++ + R + + +I LC+E +
Sbjct: 421 AGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEG-CL 479
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
K AL ++D +G + ++ I LC+ + A +LLS+M + +V
Sbjct: 480 KQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTV 536
Query: 380 ISAYSKAGDMTPAMEMLKLMRS-RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
I KA + A ++ + M + +GL +T+ L+ + +++EA +L +
Sbjct: 537 IIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRG 596
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
S +TY+ +I CKL++ D A +L +EM G+ + Y LI LC + + A
Sbjct: 597 CSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQG-RGKEA 655
Query: 499 EKLLEDM 505
++LE+M
Sbjct: 656 LQVLEEM 662
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 102/281 (36%), Gaps = 45/281 (16%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI-EALSRRKIFDWAWSVCEKMI 259
N LI+ S+ + A+E+ ++ GCV + T Y TI + L + A + + M
Sbjct: 431 NTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMT 490
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC---QED 316
G ++ I CK G+ EA +L E + +I LC Q D
Sbjct: 491 GHGVEANTVTYNIFIDRLCKEGRLDEAS---SLLSEMDTLRDEVSYTTVIIGLCKAEQLD 547
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
KLA +M+ + + F+ +I + + K + A TLL M+ G P +
Sbjct: 548 RASKLAREMV---AVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITY 604
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM------------ 424
N VI+ K + A E+ M RG+ +YT L+ G G+
Sbjct: 605 NMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMAS 664
Query: 425 -----------------------EEACEILNEAKKNHSRLS 442
EEA E+L LS
Sbjct: 665 SDCEIDDLKCRKLYLALRGQGRGEEAAELLRRMTTKMDSLS 705
>gi|83744090|gb|ABC42331.1| PPR protein [Oryza sativa Indica Group]
Length = 506
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 147/335 (43%), Gaps = 14/335 (4%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIAL--FSKLGKGKAAF 217
+ + LLK +C+ K DIV G E G + + + I L + + A
Sbjct: 127 IFNPLLKGLCAD---KRTDDAMDIVLR-GMTELGCVP-NVFSHTIILKGLCHENRSQEAL 181
Query: 218 EVFNKFGD--YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
E+ + D GC+ N +Y + L + D A++ +M++ LP+ II+
Sbjct: 182 ELLHMMADDGGGCLPNVVSYSTVTDGLLKGGDPDKAYATYREMLDRRILPNVVTYSSIIA 241
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
CKG +A V+ + + P L+ C + + A+ L+ +
Sbjct: 242 ALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTE-AIKFLEKMCSNGVE 300
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+ +SS + LC+ A+ + M+ G P ++S++ Y+ G + +
Sbjct: 301 PNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGL 360
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGY 453
LM ++PD Y + L+ A G+++EA +L +K H L P VTY+TLI GY
Sbjct: 361 FDLMVQSDMQPDHYVFNTLIYASAKQGKVDEA--MLVFSKMRHQGLKPNCVTYNTLINGY 418
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
CK+ + AL L EM GV PN YN ++Q L
Sbjct: 419 CKITRMENALALFQEMVSNGVSPNFITYNIMLQGL 453
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 101/242 (41%), Gaps = 12/242 (4%)
Query: 205 ALFSKLGKGKA---AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET 261
++ + L KG+A A EV ++ G N TY + A EKM
Sbjct: 238 SIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSN 297
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
G P+ + + CK G+ EA ++ ++ + P + + L+ E V++
Sbjct: 298 GVEPNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRGLKPDITTYSSLLHGYAIEGALVEM 357
Query: 322 A--LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
D++ + Y F+++I + + V A + SKM +G P +N++
Sbjct: 358 HGLFDLMVQSDMQPDHYV---FNTLIYASAKQGKVDEAMLVFSKMRHQGLKPNCVTYNTL 414
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA----CEILNEAK 435
I+ Y K M A+ + + M S G+ P+ TY ++ G G+ A +I+ K
Sbjct: 415 INGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTGTAKEFYVQIIKSGK 474
Query: 436 KN 437
K+
Sbjct: 475 KD 476
>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
Length = 741
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 139/326 (42%), Gaps = 4/326 (1%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
+ + G A +F GC TY ++ L + A +V M G PD
Sbjct: 119 YCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPD 178
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
S ++ C G+A EA + T A K P +V LI C + ++LA+D+
Sbjct: 179 SHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGD-LELAIDIF 237
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
+ ++ ++ +I C+ V A L S+MI G P + ++I
Sbjct: 238 KGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSE 297
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
G + A +L M + GL P+ +T L+ G++EEA + L + +++ V Y
Sbjct: 298 GHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIY 357
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
++I CK +FD A L+ ++ G P+ Y+ LI LC + A LL DM
Sbjct: 358 TSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLC-RENKLLEAISLLNDMI 416
Query: 507 LKGLHLNGITRALI--RAVKELEEDA 530
G+ N + ++ + ++E D+
Sbjct: 417 ESGVQANAVPFTILIDKHLREFRSDS 442
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 144/328 (43%), Gaps = 7/328 (2%)
Query: 159 GVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVL-TVEILNELIALFSKLGKGKAAF 217
V +AL+ CS+ G E+ DI K G + KG L V +LI F K GK + A
Sbjct: 215 AVYNALIDGYCST-GDLELAI--DIFK--GMQSKGCLPNVRTYTQLICGFCKSGKVERAM 269
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
++++ + G N TY I+ + A+ + M G P+ +I
Sbjct: 270 VLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDAL 329
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
CK G+ +EA +K + Q + +I +LC+ + A +++ E
Sbjct: 330 CKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGK-FDGAHNLMQKIITEGFVPD 388
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+SS+I LCR + A +LL+ MI G F +I + + +
Sbjct: 389 AHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISD 448
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M + G+KPDV TYT + Y G+ME+A ++ + + R + TY+TLI+GY L
Sbjct: 449 RMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLG 508
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLI 485
A L M D G +PN + Y L+
Sbjct: 509 LVSQAFSSLKNMIDNGCKPNDESYTVLL 536
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 131/289 (45%), Gaps = 6/289 (2%)
Query: 229 VANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHV 288
V N TY I A A ++ G PDS + +C+ G A
Sbjct: 71 VRNLHTYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACR 130
Query: 289 VYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSL 348
++ L ++ A L+ LC V+ A+ + + +S ++ L
Sbjct: 131 LFLLMPQRGCARTPFTYAALLQGLCGAG-MVREAMAVFAGMWPDGCAPDSHVYSIMVHGL 189
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
C A LL+ + +G P AV+N++I Y GD+ A+++ K M+S+G P+V
Sbjct: 190 CGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNV 249
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLL 466
TYT L+ G+ G++E A ++ ++ + L+P VTY TLI+G C + A +LL
Sbjct: 250 RTYTQLICGFCKSGKVERA--MVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLL 307
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
+ M+ G+ PN LI +LC K A++ L + KG+ +N +
Sbjct: 308 HSMEACGLAPNEWTCLVLIDALC-KHGRIEEAQQFLGSLVQKGIKVNQV 355
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 129/313 (41%), Gaps = 40/313 (12%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ A + G V N Y I+ + A + + M G LP+
Sbjct: 193 GRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTY 252
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
++I FCK GK + A V+Y+ E + P LI C E ++ A +L S
Sbjct: 253 TQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGH-LEHAFRLLH--S 309
Query: 331 GEARKYAIKPFSSV--IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD 388
EA A ++ + I +LC+ + A+ L ++ +G ++ S+I A K+G
Sbjct: 310 MEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGK 369
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN----------- 437
A +++ + + G PD + Y+ L+ G ++ EA +LN+ ++
Sbjct: 370 FDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTI 429
Query: 438 ----HSR------------------LSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
H R + P VTY IR YC+ + A ++ +M D G
Sbjct: 430 LIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHG 489
Query: 474 VQPNVDEYNKLIQ 486
V+PN+ YN LI+
Sbjct: 490 VRPNLTTYNTLIK 502
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 79/184 (42%), Gaps = 6/184 (3%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
I+ ++++ +L R HG + + + + P + ++I+AY AGD+ A L
Sbjct: 43 IRCLNTLLMALAR----HGMLSDMESLAARMPVRNLHTYTTLINAYCHAGDLPAAKRHLS 98
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
+ GL PD + YT + GY G AC + + +P TY L++G C
Sbjct: 99 SLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAG 158
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN-GIT 516
A+ + M G P+ Y+ ++ LC A A LL D KG N +
Sbjct: 159 MVREAMAVFAGMWPDGCAPDSHVYSIMVHGLC-GAGRAGEAVALLTDAMGKGFVPNVAVY 217
Query: 517 RALI 520
ALI
Sbjct: 218 NALI 221
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 134/356 (37%), Gaps = 57/356 (16%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K G+ + A + G NQ Y I+AL + FD A ++ +K+I G
Sbjct: 325 LIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEG 384
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE--DETVK 320
+PD+ +I C+ K EA + E + LI +E ++ K
Sbjct: 385 FVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPK 444
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
+ + D + K + ++ IRS C+ + A++++ +MI G P +N++I
Sbjct: 445 M---ISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLI 501
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC------------ 428
Y+ G ++ A LK M G KP+ +YT L+ +
Sbjct: 502 KGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDM 561
Query: 429 ----EILNEAKKNHSRLSPVTYHTLIRGYCK---LEE-------------------FDC- 461
E+L E K + Y IR K LEE + C
Sbjct: 562 KVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCM 621
Query: 462 ------------ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
AL+ L+ M P ++ Y +I +LC + + TA+ + D+
Sbjct: 622 IECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEG-SFHTAKSIFGDI 676
>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 732
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 132/307 (42%), Gaps = 37/307 (12%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI------------------------- 273
+ L RR+ FD W + MI G +PD +
Sbjct: 205 LNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGV 264
Query: 274 ----------ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLAL 323
I C+ K +EA ++ L + + P + +I C+ ++ A
Sbjct: 265 KPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGN-LRQAY 323
Query: 324 DMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAY 383
+ + + F +++ C+ +++ A++L M+ G P V+N +I
Sbjct: 324 GLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQ 383
Query: 384 SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
K+G+M AM +L M S L PDV+TYT L++G ++ EA + K S
Sbjct: 384 CKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSS 443
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
VTY++LI G+CK + AL L +EM GV+PN+ ++ LI C K + + A L
Sbjct: 444 VTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYC-KVRNIKAAMGLYF 502
Query: 504 DMRLKGL 510
+M +KG+
Sbjct: 503 EMTIKGI 509
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 144/333 (43%), Gaps = 13/333 (3%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
A++ C + ++ Y L+ KEI E + V + L+ F K + AA +F
Sbjct: 308 AMIDGYCKTGNLRQAYGLY---KEILVAEL-LPNVVVFGTLVDGFCKARELVAARSLFVH 363
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+G N Y I + A + +M PD +I+ C +
Sbjct: 364 MVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEER 423
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
EA+ ++ + ++++P LI C+E K ALD+ + + + I FS
Sbjct: 424 LAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEK-ALDLCSEMTSSGVEPNIITFS 482
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
++I C+++++ A L +M +G P + ++I A+ K +M A+ + M
Sbjct: 483 TLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEA 542
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEIL---NEAKKNHSRLSP-----VTYHTLIRGYC 454
G+ P+ +T+ L+ G+ G++ +A + N+A S + V + LI G C
Sbjct: 543 GIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLC 602
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
+ A + ++MK GV P++ Y ++++
Sbjct: 603 QNGYILRASRFFSDMKSGGVTPDIWSYVSMLKA 635
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 126/312 (40%), Gaps = 10/312 (3%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
+ K G + A+ ++ + + N + ++ + + A S+ M++ G P+
Sbjct: 313 YCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPN 372
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
+I CK G EA + + + P LI+ LC E+ + A +
Sbjct: 373 LYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAE-ANRLF 431
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
E + ++S+I C+ ++ A L S+M S G P F+++I Y K
Sbjct: 432 QRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKV 491
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
++ AM + M +G+ PDV TYT L+ + M+EA + ++ + + T+
Sbjct: 492 RNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTF 551
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE--------YNKLIQSLCLKALDWRTA 498
L+ G+ K A+ E ++ + + LI+ LC R A
Sbjct: 552 ACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQNGYILR-A 610
Query: 499 EKLLEDMRLKGL 510
+ DM+ G+
Sbjct: 611 SRFFSDMKSGGV 622
>gi|115445137|ref|NP_001046348.1| Os02g0226900 [Oryza sativa Japonica Group]
gi|49388538|dbj|BAD25660.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|49388672|dbj|BAD25856.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535879|dbj|BAF08262.1| Os02g0226900 [Oryza sativa Japonica Group]
Length = 637
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 148/350 (42%), Gaps = 34/350 (9%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + K G+ F++ GCV N + IEAL + K+ D V KM+E
Sbjct: 262 LIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVEND 321
Query: 263 SLPDS-------------------EKVGKIISWF-------------CKGGKAKEAHVVY 290
P+ +V I S F CK G A EAH V+
Sbjct: 322 CQPNQFTYSITLDILATEGQLHRLNEVLDICSRFMNRSIYSYLVKSLCKSGHASEAHNVF 381
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
+ ++ LC ++T++ A+D+L + + ++ V +L +
Sbjct: 382 CRMWNSHEKGDRDAFVSMLEVLCNAEKTLE-AIDLLHMMPEKGIVTDVGMYNMVFSALGK 440
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+K V L KM + G P +N +IS+Y + G + A E+ ++M + KPDV T
Sbjct: 441 LKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVT 500
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
Y L++ G ++EA + E ++ TY LI + K + + A L +EM
Sbjct: 501 YNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMI 560
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
G PN+ YN L+ L + A KL E M+ +GL + IT +++
Sbjct: 561 SEGCTPNIVTYNILLDCLERRG-KTEEAHKLYETMKQQGLIPDSITYSIL 609
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 112/278 (40%), Gaps = 7/278 (2%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
TY ++A R + + V E+M G D ++ K G +A V+
Sbjct: 188 TYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDM 247
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
++K P LI + T K L D+ + + F+++I +L + K
Sbjct: 248 KQKHCVPDAYTYTILIRMSGKAGRTSKF-LSFFDEMVSKGCVLNLIAFNTIIEALGKNKM 306
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
V +LSKM+ P ++ + + G + E+L + SR + +Y+Y
Sbjct: 307 VDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRLNEVLDIC-SRFMNRSIYSY-- 363
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
L+ G EA + +H + + +++ C E+ A+ LL+ M + G
Sbjct: 364 LVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKG 423
Query: 474 VQPNVDEYNKLIQSLC-LKALDWRTAEKLLEDMRLKGL 510
+ +V YN + +L LK + + L + M+ G+
Sbjct: 424 IVTDVGMYNMVFSALGKLKQVSF--ISNLFDKMKTNGI 459
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 70/172 (40%), Gaps = 2/172 (1%)
Query: 152 FFKWVTSGVVDALL--KAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSK 209
F K T+G++ + + SS G+ + + E+ E V N LI K
Sbjct: 451 FDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGK 510
Query: 210 LGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEK 269
G A +F + + G + TY IE + + A S+ ++MI G P+
Sbjct: 511 HGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVT 570
Query: 270 VGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
++ + GK +EAH +Y +++ + P + L + TV++
Sbjct: 571 YNILLDCLERRGKTEEAHKLYETMKQQGLIPDSITYSILERLESRSQRTVRI 622
>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Vitis vinifera]
Length = 590
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 134/292 (45%), Gaps = 3/292 (1%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
+IL+ L+ ++ + A +VF +G + + +L++ ++ + W V +K
Sbjct: 128 QILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKK 187
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M+ G +P+ +I CK G ++A + + ++P LIS C++
Sbjct: 188 MVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGM 247
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
+ AL + D I ++S+I CR + A L ++ G P + +
Sbjct: 248 HYE-ALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHVTYT 304
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
++I Y + D+ A+ + ++M GL P V TY ++ G++++A +LNE +
Sbjct: 305 TLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSER 364
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
VT +TLI YCK+ + A+K+ +M + G++P+ + LI C
Sbjct: 365 KVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFC 416
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 154/333 (46%), Gaps = 9/333 (2%)
Query: 180 LWDIVKEIGEKEKGVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFT 238
+W + K++ GV+ + I N LI K G + A ++ N+ + TY
Sbjct: 181 VWKVYKKM--VRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTL 238
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
I ++ + A + ++M G PD +I FC+ G+ +EA L RE
Sbjct: 239 ISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREA---LRLFREING 295
Query: 299 YPPQSVV-AFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGA 357
P V LI C+ ++ ++ AL + + E + ++S++R LC + A
Sbjct: 296 ATPNHVTYTTLIDGYCRVND-LEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDA 354
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
LL++M P N N++I+AY K GDM AM++ K M GLKPD +T+ L+ G
Sbjct: 355 NRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHG 414
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
+ +++ A E L E S TY L+ Y + + ++L +E+ G+ +
Sbjct: 415 FCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVD 474
Query: 478 VDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+ Y LI+ LC K +AE++ M+ KG+
Sbjct: 475 ISVYRALIRRLC-KIDKIESAERIFTLMQGKGM 506
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 104/210 (49%), Gaps = 10/210 (4%)
Query: 334 RKYAIKPF----SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
R + KP + ++ SL + + + + KM+ G P +FN +I A K+GD+
Sbjct: 154 RVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDV 213
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
A ++L M SR + PD++TY L+S Y G EA I + ++ VTY++L
Sbjct: 214 EKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSL 273
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
I G+C+ AL+L E+ G PN Y LI C + D A +L E M ++G
Sbjct: 274 IYGFCREGRMREALRLFREIN--GATPNHVTYTTLIDGYC-RVNDLEEALRLREVMEVEG 330
Query: 510 LHLNGIT-RALIRAVKELEEDAIENGEALV 538
LH +T +++R K EE I++ L+
Sbjct: 331 LHPGVVTYNSILR--KLCEEGKIKDANRLL 358
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 119/307 (38%), Gaps = 54/307 (17%)
Query: 191 EKGVLTVEIL--NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
E+G ++ +I+ N LI F + G+ + A +F + G N TY I+ R
Sbjct: 259 ERGGVSPDIVTYNSLIYGFCREGRMREALRLFREIN--GATPNHVTYTTLIDGYCRVNDL 316
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
+ A + E M G P I+ C+ GK K+A+ + E+K+ P L
Sbjct: 317 EEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTL 376
Query: 309 ISSLCQEDE---TVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLL 361
I++ C+ + +K+ ML+ +KP F ++I C++ +V AK L
Sbjct: 377 INAYCKIGDMGSAMKVKKKMLEA--------GLKPDQFTFKALIHGFCKLHEVDSAKEFL 428
Query: 362 SKMISEGPPPGNAVFNSVISAY-----------------------------------SKA 386
+M+ G P + ++ ++ +Y K
Sbjct: 429 FEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKI 488
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
+ A + LM+ +G+K D YT L Y G+ A ++L+E K ++ Y
Sbjct: 489 DKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIY 548
Query: 447 HTLIRGY 453
Y
Sbjct: 549 RCFSASY 555
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 100/241 (41%), Gaps = 4/241 (1%)
Query: 184 VKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALS 243
V E+ GV+T N ++ + GK K A + N+ + + T I A
Sbjct: 325 VMEVEGLHPGVVT---YNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYC 381
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS 303
+ A V +KM+E G PD +I FCK + A + P S
Sbjct: 382 KIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYS 441
Query: 304 VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSK 363
++L+ S +D + + + D+ S + I + ++IR LC++ + A+ + +
Sbjct: 442 TYSWLVDSYYDQDNK-EAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTL 500
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
M +G + V+ S+ AY KAG A +ML M R L + Y + YA G
Sbjct: 501 MQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGS 560
Query: 424 M 424
+
Sbjct: 561 I 561
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 165/371 (44%), Gaps = 21/371 (5%)
Query: 166 KAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGD 225
+ +C VGK E + IVKE+ K V ++I + + AF +F +
Sbjct: 425 RCLCG-VGKFE--KAFQIVKEMMRK-GFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKK 480
Query: 226 YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKE 285
G + TY I++ + + + A S ++M G P+ ++ + K + +
Sbjct: 481 VGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQ 540
Query: 286 AHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK----------LALDMLDDFSGEARK 335
A+ ++ YP + LI LC+ E K + ++ DF E +
Sbjct: 541 ANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKD 600
Query: 336 Y-AIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
I P + +++ LC+ + V A LL M++ G P V+++++ + K G++
Sbjct: 601 TDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEID 660
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A E+ M G P V+TYT L+ G+++ A ++L++ K+ + VTY ++
Sbjct: 661 SAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMV 720
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
G CK E + AL LL+ M+ G PNV Y LI L KA +L M+ KG
Sbjct: 721 DGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLG-KAGKVDAGLELFMQMKTKGC 779
Query: 511 HLNGIT-RALI 520
N +T R LI
Sbjct: 780 APNYVTYRILI 790
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 142/338 (42%), Gaps = 21/338 (6%)
Query: 168 ICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYG 227
+C + + + L+ +K++G V T IL I F K G + A F++ G
Sbjct: 462 LCQAKRVDKAFLLFQEMKKVGVNPD-VYTYTIL---IDSFCKAGLIEQAQSWFDEMRSAG 517
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH 287
C N TY + A + K A + +M+ P++ +I CK G+ ++A
Sbjct: 518 CSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKAC 577
Query: 288 VVYTL---------------AREKKMYPPQSVV-AFLISSLCQEDETVKLALDMLDDFSG 331
VY ++ P V L++ LC+ + V A D+LD
Sbjct: 578 EVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKA-QKVSDAHDLLDAMLA 636
Query: 332 EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
+ + +++ C++ ++ A+ + +M G P + S+I K G +
Sbjct: 637 AGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDL 696
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
AM++L M P+V TYT ++ G G+ E+A +L+ +K + VTY LI
Sbjct: 697 AMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALID 756
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
G K + D L+L +MK G PN Y LI C
Sbjct: 757 GLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCC 794
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 152/382 (39%), Gaps = 48/382 (12%)
Query: 183 IVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEAL 242
+++EIGE ++ VL +LN L+ G A E + D+G + TY ++ L
Sbjct: 156 LLREIGEDDRDVLG-RLLNVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVL 214
Query: 243 SRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQ 302
+ + A+ V ++M +G D VG CK G+ +A + L RE +
Sbjct: 215 ASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWGDA--LDLLERED--FKLD 270
Query: 303 SVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLS 362
+V+ + S E A+ L + + + +++ + K + K +++
Sbjct: 271 TVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIIN 330
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT---GLMSG-- 417
M++EG P ++FNS++ Y A D A ++ M + G P Y G + G
Sbjct: 331 MMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGRE 390
Query: 418 ------------------------------------YANGGQMEEACEILNEAKKNHSRL 441
G+ E+A +I+ E +
Sbjct: 391 ELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVP 450
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
TY +I C+ + D A L EMK VGV P+V Y LI S C KA A+
Sbjct: 451 DASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFC-KAGLIEQAQSW 509
Query: 502 LEDMRLKGLHLNGIT-RALIRA 522
++MR G N +T AL+ A
Sbjct: 510 FDEMRSAGCSPNVVTYTALLHA 531
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 124/306 (40%), Gaps = 20/306 (6%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGS------------ 263
A ++F++ C N TY I+ L + A V K+I T
Sbjct: 541 ANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKD 600
Query: 264 ----LPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
P+ G +++ CK K +AH + P Q V L+ C+ E +
Sbjct: 601 TDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGE-I 659
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
A ++ + ++ ++S+I + + + A +LS+M+ + P + ++
Sbjct: 660 DSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAM 719
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+ K G+ A+ +L LM +G P+V TYT L+ G G+++ E+ + K
Sbjct: 720 VDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGC 779
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
+ VTY LI C D A LL+EMK + Y +Q + L +
Sbjct: 780 APNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFL---ASL 836
Query: 500 KLLEDM 505
LLE+M
Sbjct: 837 GLLEEM 842
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 70/340 (20%), Positives = 122/340 (35%), Gaps = 78/340 (22%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+ +C + + + L D + G + + + + L+ F K+G+ +A EVF +
Sbjct: 613 ALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQI----VYDALVDGFCKVGEIDSAQEVFLR 668
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + + TY I+ + + D A V +M++ P+ ++ CK G+
Sbjct: 669 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGE 728
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET-VKLALDMLDDFSGEARKYAIKPF 341
++A + +L +K P LI L + + L L M G A Y +
Sbjct: 729 TEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVT--Y 786
Query: 342 SSVIRSLC-------------RMKDVH------GAKT--------------LLSKMISEG 368
+I C MK H G +T LL +M S
Sbjct: 787 RILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEEMESHD 846
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLM----------------------------- 399
P V+ +I ++SKAG + A+E+ K M
Sbjct: 847 TAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVE 906
Query: 400 ---------RSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
R RG+ PD+ + L+ G + EA ++
Sbjct: 907 EAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQL 946
>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 576
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 134/269 (49%), Gaps = 8/269 (2%)
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
MI G P+ +IS C+ GKA EA V + +EK + P LIS+ C+E +
Sbjct: 309 MIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGK 368
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
V LA+ +DD I +++++ SLC+ A + K+ G PP + +N
Sbjct: 369 -VDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYN 427
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
++ A +GD A+ M+ M S G+ PD TY L+S G ++EA +L + ++
Sbjct: 428 TMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERT 487
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
+ + ++Y+ ++ G CK A+++L M D G QPN Y L++ + WR+
Sbjct: 488 EWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGVGYAG--WRS 545
Query: 498 -AEKLLEDMRLKGLHLNGITRALIRAVKE 525
A +L + + + +N I++ L R +++
Sbjct: 546 YAVELAKSL----VSMNAISQDLFRRLQK 570
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 107/260 (41%), Gaps = 33/260 (12%)
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALD 324
PDS +IS FC+ + A+ V + + P LI SLC + + LAL
Sbjct: 144 PDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGK-LDLALK 202
Query: 325 MLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
++D + + ++ +I + + A LL +M+S G P +N ++
Sbjct: 203 VMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMC 262
Query: 385 KAG------------DMTPAM--------------------EMLKLMRSRGLKPDVYTYT 412
K G + TP++ ++ M +G +P++ TY+
Sbjct: 263 KRGLVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYS 322
Query: 413 GLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
L+S G+ EA ++L K+ Y LI +CK + D A+ +++M
Sbjct: 323 VLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISA 382
Query: 473 GVQPNVDEYNKLIQSLCLKA 492
G P++ YN ++ SLC K
Sbjct: 383 GWLPDIVNYNTIMGSLCKKG 402
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 84/181 (46%), Gaps = 31/181 (17%)
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P + +N+VIS + ++ A ++ M+ RG PDV TY L+ G+++ A ++
Sbjct: 144 PDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKV 203
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
+++ +++ + +TY LI D A++LL+EM G+QP++ YN +++ +C
Sbjct: 204 MDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCK 263
Query: 491 KAL-------------------------------DWRTAEKLLEDMRLKGLHLNGITRAL 519
+ L W E+L+ DM +KG N +T ++
Sbjct: 264 RGLVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYSV 323
Query: 520 I 520
+
Sbjct: 324 L 324
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 93/228 (40%), Gaps = 1/228 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI+ + GK A +V + G + Y I A + D A + MI G
Sbjct: 324 LISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAG 383
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
LPD I+ CK G+A EA ++ E P S + +L + ++ A
Sbjct: 384 WLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIR-A 442
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
L M+ + ++S+I SLCR V A LL M P +N V+
Sbjct: 443 LTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLG 502
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
KA + A+E+L +M G +P+ TYT L+ G G A E+
Sbjct: 503 LCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGVGYAGWRSYAVEL 550
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 141/333 (42%), Gaps = 14/333 (4%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA--FEV 219
++ L ++C KE +D + G K +I + L +G A +
Sbjct: 374 NSFLASLCKHGRSKEAAEFFDSMTAKGHKP------DIFSYCTLLHGYASEGCFADMIGL 427
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
FN G AN + I A ++R + D A + +M + G PD +IS F +
Sbjct: 428 FNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSR 487
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK---LALDMLDDFSGEARKY 336
G+ +A + + + P +V + +I C VK L +M++ G R
Sbjct: 488 MGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMIN--KGIPRP- 544
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
I FSSVI SLC+ V A + G PG FNS+I Y G M A ++L
Sbjct: 545 DIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKIL 604
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
M G++PD+ TY L+ GY G++ + + E ++ + + VTY ++ G +
Sbjct: 605 DAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRA 664
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A K +EM + G V Y ++ LC
Sbjct: 665 GRTVAARKKFHEMIESGTTVTVSIYGIILGGLC 697
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/431 (22%), Positives = 181/431 (41%), Gaps = 77/431 (17%)
Query: 164 LLKAIC-SSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+LKA+C +S+ ++ + L + K+ G V+ + +I F G+ A +F++
Sbjct: 234 VLKALCDNSMSQRALDLLQMMAKQGGACSPDVVA---YSTVIHGFFNEGETGKACSLFHE 290
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + TY I+AL + + D A V +M G+ PD+ +I + G+
Sbjct: 291 MTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGR 350
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK------- 335
KEA ++ +++ + P ++SLC+ + K A + D + + K
Sbjct: 351 LKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRS-KEAAEFFDSMTAKGHKPDIFSYC 409
Query: 336 -----YA-----------------------IKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
YA F+ +I + + V A + ++M +
Sbjct: 410 TLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQ 469
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P +++VIS +S+ G +T AME M +RG++P+ Y+ ++ G+ G + +A
Sbjct: 470 GVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKA 529
Query: 428 CEILNE------------------------------------AKKNHSRLSPVTYHTLIR 451
E+++E A R +T+++LI
Sbjct: 530 KELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLID 589
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH 511
GYC + + D A K+L+ M+ VGV+P++ YN L+ K L +M+ KG+
Sbjct: 590 GYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGY-FKNGRINDGLTLFREMQRKGVK 648
Query: 512 LNGITRALIRA 522
N +T ++ A
Sbjct: 649 PNTVTYGIMLA 659
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 150/343 (43%), Gaps = 8/343 (2%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
+ LI ++K G A +F + G + TY I SR A +
Sbjct: 441 HVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQ 500
Query: 258 MIETGSLPDSEKVGKIISWFC-KGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQ 314
M+ G P++ II FC GG K +V + K P +V F +I+SLC+
Sbjct: 501 MVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMI--NKGIPRPDIVFFSSVINSLCK 558
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
D V A D+ D + + + F+S+I C + + A +L M G P
Sbjct: 559 -DGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIV 617
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
+N+++ Y K G + + + + M+ +G+KP+ TY +++G G+ A + +E
Sbjct: 618 TYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEM 677
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
++ + ++ Y ++ G C+ D A+ L ++ + V+ ++ N +I ++ K
Sbjct: 678 IESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAM-YKVQR 736
Query: 495 WRTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIENGEAL 537
A++L + GL N T ++ + L++ +E+ +
Sbjct: 737 KEEAKELFATISASGLLPNESTYGVM-IINLLKDGGVEDANNM 778
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 109/235 (46%), Gaps = 5/235 (2%)
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEA-HVVYTLAREKKMYPPQSVVAF--LISSL 312
+M E G +P++ ++ C ++ A ++ +A++ P VVA+ +I
Sbjct: 217 HRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPD-VVAYSTVIHGF 275
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
E ET K A + + + + K + ++ +I +LC+ + + A+ +L +M ++G P
Sbjct: 276 FNEGETGK-ACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPD 334
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
++ +I Y+ G + A +M + M+ RGL P++ T ++ G+ +EA E +
Sbjct: 335 TVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFD 394
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
+ +Y TL+ GY F + L N MK G+ N + LI +
Sbjct: 395 SMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHA 449
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 3/171 (1%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPP--PGNAVFNSVISAYSKAGDMTPAMEMLKL 398
+S V+++LC A LL M +G P +++VI + G+ A +
Sbjct: 231 YSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHE 290
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M +G+KPDV TY ++ M++A +L + + ++ VTY +I GY L
Sbjct: 291 MTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGR 350
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
A K+ EMK G+ PN+ N + SLC AE + M KG
Sbjct: 351 LKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAE-FFDSMTAKG 400
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/244 (18%), Positives = 104/244 (42%), Gaps = 5/244 (2%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+++ ++C + + ++D+ +IGE+ GV+T N LI + +GK AF++ +
Sbjct: 551 SVINSLCKDGRVMDAHDIFDLATDIGERP-GVIT---FNSLIDGYCLVGKMDKAFKILDA 606
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + TY ++ + + ++ +M G P++ G +++ + G+
Sbjct: 607 MEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGR 666
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
A + E S+ ++ LC+ + A+ + K++I +
Sbjct: 667 TVAARKKFHEMIESGTTVTVSIYGIILGGLCR-NNCADEAIILFQKLGTMNVKFSITILN 725
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
++I ++ +++ AK L + + + G P + + +I K G + A M M
Sbjct: 726 TMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKS 785
Query: 403 GLKP 406
G+ P
Sbjct: 786 GIVP 789
>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
Length = 658
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 159/344 (46%), Gaps = 5/344 (1%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
I N LI K G ++ + GC N+ TY I L + D A S+ E+M
Sbjct: 259 IYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERM 318
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+ + +P+ G +I+ K +A + + E+ Q + + LIS L +E +
Sbjct: 319 VSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKA 378
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+ A+ + + + + I +S+VI LCR + AK +L+ MIS G P ++S
Sbjct: 379 EE-AMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSS 437
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
++ + K G A+++ + M G + + Y+ L+ G G+++EA + ++
Sbjct: 438 LMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIG 497
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEM---KDVGVQPNVDEYNKLIQSLCLKALDW 495
+ V Y ++I+G C + D ALKL +EM ++ QP+V YN L+ LC++ D
Sbjct: 498 IKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQK-DV 556
Query: 496 RTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIENGEALVE 539
A LL M +G + IT + D+ E G + +E
Sbjct: 557 SRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSDSCEEGRSFLE 600
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 152/362 (41%), Gaps = 26/362 (7%)
Query: 197 VEILNELIALFSKLGKG---KAAFEVFNKFGD-YGCVANQETYYFTI-----EALSRRKI 247
V I I +F GK + A ++F++ D + C + +++ + E L R +
Sbjct: 109 VIIERSFIVVFRAYGKAHLPEKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGL 168
Query: 248 FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF 307
+ + V M S P+ +I CK G A V+ EKK P
Sbjct: 169 EFYDYVVNSNMNMNIS-PNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCT 227
Query: 308 LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
L+ LC+E E + A+ +LD+ E + ++ +I LC+ D+ L+ M +
Sbjct: 228 LMDGLCKE-ERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLK 286
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P +N++I G + A+ +L+ M S P+ TY L++G + +
Sbjct: 287 GCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDG 346
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
+L ++ RL+ Y LI G K + + A+ L +M + G +PN+ Y+ +I
Sbjct: 347 ARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDG 406
Query: 488 LCLKALDWRTAEKLLEDM--------------RLKGLHLNGITRALIRAVKELEEDAIEN 533
LC + A+++L M +KG G++ I+ +E++E
Sbjct: 407 LCREG-KPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSR 465
Query: 534 GE 535
E
Sbjct: 466 NE 467
>gi|383157596|gb|AFG61137.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157602|gb|AFG61140.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157606|gb|AFG61142.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157616|gb|AFG61147.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
Length = 133
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 81/130 (62%)
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N+VI+ K AM +L+ M R +KPD+Y Y +MS YA G+ME+ACE+ ++ +
Sbjct: 1 YNAVITGLCKGEKPDEAMTLLEEMPGRHIKPDIYAYNVIMSSYAKAGKMEKACEVFSKIE 60
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
++ + ++Y LI G+C+ + A +E+K G PN D Y+KLI++ C++ DW
Sbjct: 61 NDNIKSHFISYQILIDGFCRQGSLEKAHHYFSELKKSGRWPNKDSYSKLIRACCIEGFDW 120
Query: 496 RTAEKLLEDM 505
RTA+ LL++M
Sbjct: 121 RTAQTLLDEM 130
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 70/133 (52%), Gaps = 3/133 (2%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+++VI LC+ + A TLL +M P +N ++S+Y+KAG M A E+ +
Sbjct: 1 YNAVITGLCKGEKPDEAMTLLEEMPGRHIKPDIYAYNVIMSSYAKAGKMEKACEVFSKIE 60
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+ +K +Y L+ G+ G +E+A +E KK+ + +Y LIR C +E FD
Sbjct: 61 NDNIKSHFISYQILIDGFCRQGSLEKAHHYFSELKKSGRWPNKDSYSKLIRACC-IEGFD 119
Query: 461 --CALKLLNEMKD 471
A LL+EM++
Sbjct: 120 WRTAQTLLDEMEE 132
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 152/331 (45%), Gaps = 13/331 (3%)
Query: 184 VKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALS 243
VK E+E ++E+ N LI+ K + ++ + G G N TY I+
Sbjct: 564 VKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWC 623
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS 303
+ + D A+S +M E G + ++S + G+ EA+++ + +P
Sbjct: 624 KEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHE 683
Query: 304 VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKT 359
FL S + ++ D LD E+ K + P ++ I LC+ V A+
Sbjct: 684 --CFLKSDI--RYAAIQKIADSLD----ESCKTFLLPNNIVYNIAIAGLCKTGKVDDARR 735
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
S + +G P N + ++I YS AG++ A + M RGL P++ TY L++G
Sbjct: 736 FFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLC 795
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
++ A + ++ + + VTY+TLI GYCK+ D A KL ++M + G+ P+V
Sbjct: 796 KSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVV 855
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
Y+ LI LC K D + KLL M G+
Sbjct: 856 TYSALINGLC-KHGDIERSMKLLNQMIKAGV 885
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 161/378 (42%), Gaps = 48/378 (12%)
Query: 179 ALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFT 238
+WD + +G + + + + ++ ++ + G K A VF+ G G + + +
Sbjct: 140 VIWD--ELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSL 197
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA----HVVYTLAR 294
+ L + A V ++MI G +PD V +++ FCK GK EA + L
Sbjct: 198 LNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGV 257
Query: 295 EKKMYPPQSVV-------------------------------AFLISSLCQE---DETVK 320
E + S++ LI C++ DE K
Sbjct: 258 EPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEK 317
Query: 321 LALDMLDD--FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+ M ++ + R Y + +I CR + A LL +M+ G + NS
Sbjct: 318 VLRGMQEEAALVPDERAYGV-----LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNS 372
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I+ Y K G++ A ++ M LKPD Y+Y L+ GY G EA + ++ +
Sbjct: 373 LINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEG 432
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
+ +TY+TL++G C++ FD AL++ + M GV P+ Y+ L+ L K ++ A
Sbjct: 433 IEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGL-FKMENFEGA 491
Query: 499 EKLLEDMRLKGLHLNGIT 516
L +D+ +G + IT
Sbjct: 492 STLWKDILARGFTKSRIT 509
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 121/294 (41%), Gaps = 15/294 (5%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + + GK A + ++ G N I +R A V +M++
Sbjct: 338 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 397
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETV 319
PDS ++ +C+ G EA + ++ + P L+ LC+ D+ +
Sbjct: 398 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 457
Query: 320 KLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
++ M+ K + P +S+++ L +M++ GA TL +++ G
Sbjct: 458 QIWHLMM--------KXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRIT 509
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
FN++IS K G M A E+ M+ G PD TY L+ GY + +A ++ +
Sbjct: 510 FNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAME 569
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ S Y++LI G K LL EM G+ PN+ Y LI C
Sbjct: 570 REXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWC 623
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 122/269 (45%), Gaps = 12/269 (4%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFT-IEALSRRKIFDWAWSV 254
+ I + +++ +LG+ A + K D+G + E + + I + +KI D
Sbjct: 646 NIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDES 705
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI---SS 311
C+ + LP++ I+ CK GK +A +++ K P LI S+
Sbjct: 706 CKTFL----LPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSA 761
Query: 312 LCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
DE +L +ML I ++++I LC+ ++V A+ L K+ +G P
Sbjct: 762 AGNVDEAFRLRDEMLR----RGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFP 817
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+N++I Y K G+M A ++ M G+ P V TY+ L++G G +E + ++L
Sbjct: 818 NVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLL 877
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
N+ K + Y TL++G K ++
Sbjct: 878 NQMIKAGVDSKLIEYCTLVQGGFKTSNYN 906
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 128/314 (40%), Gaps = 36/314 (11%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
I N LI + K G+ A V + D+ + +Y ++ R A+++C+KM
Sbjct: 369 ICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKM 428
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
++ G P ++ C+ G +A ++ L + + P + + L+ L + E
Sbjct: 429 LQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKM-EN 487
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+ A + D + F+++I LC+M + A+ + KM G P + +
Sbjct: 488 FEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRT 547
Query: 379 VISAYSKAGD---------------MTPAMEM--------------------LKLMRSRG 403
+I Y KA + ++P++EM L M RG
Sbjct: 548 LIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRG 607
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
L P++ TY L+ G+ G +++A E +N + + T++ G +L D A
Sbjct: 608 LTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEAN 667
Query: 464 KLLNEMKDVGVQPN 477
L+ +M D G P+
Sbjct: 668 LLMQKMVDHGFFPD 681
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 157/369 (42%), Gaps = 48/369 (13%)
Query: 195 LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSV 254
L+ N ++ GK A E+ + N TY I R +
Sbjct: 114 LSTTTFNIMLRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIAGFCARGRVQAGIEI 169
Query: 255 CEKMIETGSL-PDSEKVGKIISWFCKGGKAKEAHVVYT-LAREKKMYPPQSVVAFLISSL 312
+M E G + PD +IS +CK GK ++A V+ + E K+ P + LI
Sbjct: 170 MREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGY 229
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
C + +++AL + + ++ + +L A L+ +M +G P
Sbjct: 230 CDQGN-LEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPD 288
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRS------------------------------- 401
+N +I+ Y K G AM+M ++M
Sbjct: 289 AFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFN 348
Query: 402 ----RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCK 455
RG++PD++ Y L++ + GG M+ A EI+ E +K R++P VTY+TL+RG C
Sbjct: 349 DAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKK--RITPDDVTYNTLMRGLCL 406
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
L D A L+ EM G+QP++ YN LI +K D + A K+ ++M KG + +
Sbjct: 407 LGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKG-DIKDAVKVRDEMMGKGFNPTLL 465
Query: 516 T-RALIRAV 523
T A+I+ +
Sbjct: 466 TYNAMIKGL 474
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 154/347 (44%), Gaps = 39/347 (11%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVA-NQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N +IA F G+ +A E+ + + G +A ++ TY I + + A V ++M+
Sbjct: 151 NTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEML 210
Query: 260 ETGSL-PDSEKVGKIISWFC-----------------KG------------------GKA 283
G + P++ +I +C +G G+A
Sbjct: 211 TEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRA 270
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
EAH + EK + P LI+ C+E + K A+ M + G+ + + ++S
Sbjct: 271 AEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKK-AMKMFEVMVGKGIRATVVTYTS 329
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
+I +L V L + + G P ++N++I+++ GDM A E++ M +
Sbjct: 330 LIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKR 389
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
+ PD TY LM G G+++EA ++ E K + V+Y+TLI GY + A+
Sbjct: 390 ITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAV 449
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
K+ +EM G P + YN +I+ LCL AE L+++M G+
Sbjct: 450 KVRDEMMGKGFNPTLLTYNAMIKGLCLNG-QGGDAEDLVKEMVGNGI 495
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 134/292 (45%), Gaps = 9/292 (3%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI + G + A + D G TY + L A ++ E+M E
Sbjct: 223 NALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGE 282
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD+ +I+ +CK GK K+A ++ + K + LI +L ++K
Sbjct: 283 KGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHAL-----SMK 337
Query: 321 LALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ D +A + I+P ++++I S C D+ A ++ +M + P + +
Sbjct: 338 GMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTY 397
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N+++ G + A +++ M RG++PD+ +Y L+SGY+ G +++A ++ +E
Sbjct: 398 NTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMG 457
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ +TY+ +I+G C + A L+ EM G+ P+ Y LI+ L
Sbjct: 458 KGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGL 509
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 157/349 (44%), Gaps = 6/349 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ A C +E + + + + + G K ++ N +I K G+ A +
Sbjct: 5 NTLIGAYCREGLLEEAFEIMNSMADKGLKP----SLFTYNAIINGLCKKGRYARAKGILI 60
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ + G + TY + RR F A + +M+ G +PD +++ F +
Sbjct: 61 EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+A V + ++ + P + L+ C+ ++ AL + D+ + + +
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLE-ALKIRDEMLEQGCVLDVIAY 179
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
++++ LC+ K + A L +M+ G P F ++I + + G+MT A+ + M
Sbjct: 180 NTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQ 239
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
R +KPD+ Y L+ G+ G+ME+A E+ + + +TY LI YC +
Sbjct: 240 RNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSE 299
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
A +L + M + G++P + N +I+ C ++ D A++ L M KG+
Sbjct: 300 AFRLWDVMIEKGIKPTLVTCNTVIKGYC-RSGDSSKADEFLGRMIAKGV 347
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 1/218 (0%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
I L+ + + G A ++ ++ + GCV + Y + L + K+ A + ++M
Sbjct: 143 IYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEM 202
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+E G+LPD +I C+ G +A ++ ++ + P LI C+ E
Sbjct: 203 VERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEM 262
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
K A ++ D + +I + C + V A L MI +G P N+
Sbjct: 263 EK-ASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNT 321
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
VI Y ++GD + A E L M ++G+ PD +Y L++
Sbjct: 322 VIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 4/114 (3%)
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+N++I AY + G + A E++ M +GLKP ++TY +++G G+ A IL E
Sbjct: 2 VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 61
Query: 434 AKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
+ LSP TY+TL+ C+ + F A ++ EM GV P++ ++ L+
Sbjct: 62 ML--NIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLM 113
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 13/205 (6%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++++I + CR + A +++ M +G P +N++I+ K G A +L M
Sbjct: 4 YNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEML 63
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+ GL PD TY L+ EA EI E + V++ +L+ + + D
Sbjct: 64 NIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLD 123
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLC-----LKALDWRTAEKLLE-----DMRLKGL 510
AL +MK G+ P+ Y L+ C L+AL R +++LE D+
Sbjct: 124 QALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIR--DEMLEQGCVLDVIAYNT 181
Query: 511 HLNGITR-ALIRAVKELEEDAIENG 534
LNG+ + ++ +L ++ +E G
Sbjct: 182 ILNGLCKEKMLTDADKLFDEMVERG 206
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
TY L+ Y G +EEA EI+N + S TY+ +I G CK + A +L EM
Sbjct: 3 TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62
Query: 470 KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
++G+ P+ YN L+ C + ++ A+++ +M +G+
Sbjct: 63 LNIGLSPDTTTYNTLLVESCRRD-NFSEAKEIFGEMLRQGV 102
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
VTY+TLI YC+ + A +++N M D G++P++ YN +I LC K R L+E
Sbjct: 2 VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 61
Query: 504 DMRL 507
+ +
Sbjct: 62 MLNI 65
>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 215/492 (43%), Gaps = 55/492 (11%)
Query: 33 ISRSLSKPSLYRSSRFLSESPAANPKDES---SFSPETDFSSRSFGENEYAQ-------- 81
+ R+L +PS F+S A NP ++S +F P SS SF + ++Q
Sbjct: 1 MRRALLRPS------FVS---AQNPNEKSPTQTFLPLLFISSSSFTDYGFSQNFRFVFTN 51
Query: 82 -MDPSADAVESKEEEAYEIDGDK-------LENVLSLLQSSVDGYLESSLDSF----ELD 129
+ P + +E + + I + + +L+LL S + +E +LDSF +
Sbjct: 52 TLLPPPEWIEPFVDVSDVISSSQPLDPSPWVAQILNLLDGSSN--MEHNLDSFCRKFFVK 109
Query: 130 LHEDFVLKVLETPLVL--GENLVCFFKWVTSGVVDALLKAICSSVGKKEVYAL-WDIVK- 185
L +FV VL++ + E V FF W +G + I V E+ D+VK
Sbjct: 110 LSPNFVTFVLQSVELREKPEVAVRFFFW--AGKQKKYVHKIECHVSLIELLTFSADLVKI 167
Query: 186 ---EIGEKEKGVLTVE-ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEA 241
K++G+L E N LI F LG + V+ + + G + TY F +
Sbjct: 168 RLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNG 227
Query: 242 LSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPP 301
L + A V E M +PD+ +I +CK GK ++A + K + P
Sbjct: 228 LVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPD 287
Query: 302 QSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKP--FSSVIRSLCRMKDVHG 356
+ LI + E D + L L+M E R I P +S VI LC+ +
Sbjct: 288 KITYMTLIQACYSERDFDTCLSLYLEM------EERGLEIPPHSYSLVIGGLCKQRKCME 341
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A + M +G A++ ++I +YSK G M AM + + M++ G +PD TY+ L++
Sbjct: 342 AYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVN 401
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
G G++++ E+ + + ++ + Y +LI G K + A L EM + G
Sbjct: 402 GLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCAR 461
Query: 477 NVDEYNKLIQSL 488
+ YN +I +L
Sbjct: 462 DSYCYNAIIDAL 473
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 137/327 (41%), Gaps = 2/327 (0%)
Query: 184 VKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALS 243
V E+ + K V N +I + K GK + A E F ++ TY I+A
Sbjct: 240 VFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACY 299
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS 303
+ FD S+ +M E G +I CK K EA+ V+ +K +
Sbjct: 300 SERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVA 359
Query: 304 VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSK 363
+ LI S ++ +++ A+ + + E + +S ++ LC+ + L
Sbjct: 360 IYTALIDSY-SKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDF 418
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
++G + S+I KAG + A + + M +G D Y Y ++ A G+
Sbjct: 419 CRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGK 478
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
+++A + ++ + T+ LI G K + + A+K ++M D G+ P V +
Sbjct: 479 IDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRA 538
Query: 484 LIQSLCLKALDWRTAEKLLEDMRLKGL 510
L LCL R A K+L+D+ G+
Sbjct: 539 LAIGLCLCGKVAR-ACKILDDLAPMGI 564
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 133/324 (41%), Gaps = 39/324 (12%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I K K A+ VF GC AN Y I++ S+ + A + E+M G
Sbjct: 329 VIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEG 388
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD+ +++ CK G+ + ++ R K + ++ A
Sbjct: 389 FEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGV----AINAMF-------------- 430
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++S+I L + + A+ L +M +G + +N++I A
Sbjct: 431 ------------------YASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDA 472
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+K G + A+ + M G VYT+T L+ G + EEA + ++ +
Sbjct: 473 LAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPT 532
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
++ L G C + A K+L+++ +G+ P + +I +LC KA + A KL
Sbjct: 533 VASFRALAIGLCLCGKVARACKILDDLAPMGIIPET-AFEDMINTLC-KAQRIKEACKLA 590
Query: 503 EDMRLKGLHLNGITRA-LIRAVKE 525
+ + +G + G R LI A+++
Sbjct: 591 DGIVDRGREIPGRIRTVLINALRK 614
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 83/180 (46%), Gaps = 2/180 (1%)
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+S+I+S + V + +M G P +N +++ + + A ++ ++M
Sbjct: 187 NSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDG 246
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
+ PD TY ++ GY G++++A E + + + + +TY TLI+ +FD
Sbjct: 247 GKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDT 306
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN-GITRALI 520
L L EM++ G++ Y+ +I LC K A + E M KG N I ALI
Sbjct: 307 CLSLYLEMEERGLEIPPHSYSLVIGGLC-KQRKCMEAYAVFETMNQKGCRANVAIYTALI 365
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 100/243 (41%), Gaps = 15/243 (6%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
L+ +C S + L+D + G + +++ L K G+ + A +F +
Sbjct: 398 VLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGL----GKAGRIEDAENLFEE 453
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ GC + Y I+AL++ D A ++ +M E G +I K K
Sbjct: 454 MSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHK 513
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP-- 340
+EA + +K + P + L LC + + A +LDD + I P
Sbjct: 514 NEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVAR-ACKILDDLA----PMGIIPET 568
Query: 341 -FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
F +I +LC+ + + A L ++ G + +I+A KAG+ + ++KLM
Sbjct: 569 AFEDMINTLCKAQRIKEACKLADGIVDRGREIPGRIRTVLINALRKAGN---SDLVIKLM 625
Query: 400 RSR 402
S+
Sbjct: 626 HSK 628
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 2/146 (1%)
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
S+I + + D+ + ++ RGL L+ + N G +EE + K+N
Sbjct: 153 SLIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKEN 212
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
S TY+ L+ G + A K+ M + P+ YN +I+ C KA +
Sbjct: 213 GIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYC-KAGKLQK 271
Query: 498 AEKLLEDMRLKGLHLNGIT-RALIRA 522
A + DM +K + + IT LI+A
Sbjct: 272 AMEKFRDMEMKNVKPDKITYMTLIQA 297
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 139/313 (44%), Gaps = 5/313 (1%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N LI F K A F K G + T+ + L A ++ +M
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMF 176
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
ET P+ +++ C+ G+ EA + E + P Q ++ +C++ +TV
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236
Query: 320 KLALDMLDDFSGEARKYA-IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
AL++L + + +S++I SLC+ A+ L ++M +G P +NS
Sbjct: 237 S-ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I + +G + A ++L+ M R + PDV TY L++ + G+ EA E+ +E
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC-LKALDWRT 497
+ +TY ++I G+CK D A + M G PN+ +N LI C K +D
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID--D 413
Query: 498 AEKLLEDMRLKGL 510
+LL +M GL
Sbjct: 414 GMELLHEMTETGL 426
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 148/333 (44%), Gaps = 16/333 (4%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
LL +C E L+ + E + V ++N L + G+ A + ++
Sbjct: 154 TLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGL----CREGRIVEAVALLDR 209
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL-PDSEKVGKIISWFCKGG 281
+ G Q TY ++ + ++ A ++ KM E + P+ II CK G
Sbjct: 210 MMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDG 269
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYA- 337
+ +A ++T +EK ++P +I C + +L +ML+ RK +
Sbjct: 270 RHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLE------RKISP 323
Query: 338 -IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ ++++I + + A+ L +M+ G P ++S+I + K + A M
Sbjct: 324 DVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMF 383
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
LM ++G P++ T+ L+ GY ++++ E+L+E + TY+TLI G+ +
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + AL LL EM G+ P++ + L+ LC
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 131/322 (40%), Gaps = 25/322 (7%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I F K + AA +F GC N T+ I+ K D + +M ETG
Sbjct: 366 MIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+ D+ +I F G A + + P L+ LC ++ +K A
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC-DNGKLKDA 484
Query: 323 LDMLDDFSGEARKY-AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP------------ 369
L+M + A PF+ V DV L+S +I+EG
Sbjct: 485 LEMFKVMQKSKKDLDASHPFNGV------EPDVQTYNILISGLINEGKFLEAEELYEEMP 538
Query: 370 ----PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
P ++S+I K + A +M M S+ P+V T+T L++GY G+++
Sbjct: 539 HRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVD 598
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
+ E+ E + + +TY TLI G+ K+ + AL + EM GV P+ ++
Sbjct: 599 DGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 658
Query: 486 QSLCLKALDWRTAEKLLEDMRL 507
L K + + A +LE +++
Sbjct: 659 TGLWSKE-ELKRAVAMLEKLQM 679
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 2/174 (1%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
I F+ +I+ C + A + K+ G P F +++ ++ A+ +
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFH 173
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M +P+V T+T LM+G G++ EA +L+ ++ + + +TY T++ G CK
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233
Query: 458 EFDCALKLLNEMKDVG-VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+ AL LL +M++V + PNV Y+ +I SLC K A+ L +M+ KG+
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLC-KDGRHSDAQNLFTEMQEKGI 286
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 1/184 (0%)
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A+D+ D ++ F ++ + RM+ +L KM + FN +I
Sbjct: 63 AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIK 122
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
+ + A+ + GL PDV T+T L+ G ++ EA + ++ + R
Sbjct: 123 CFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRP 182
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+ VT+ TL+ G C+ A+ LL+ M + G+QP Y ++ +C K D +A L
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG-DTVSALNL 241
Query: 502 LEDM 505
L M
Sbjct: 242 LRKM 245
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 72/172 (41%), Gaps = 5/172 (2%)
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+K + A L S M+ P P F ++ + + + + M + ++ D+Y+
Sbjct: 57 IKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYS 116
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
+ L+ + + ++ A + K VT+ TL+ G C + AL L ++M
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMF 176
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAE--KLLEDMRLKGLHLNGITRALI 520
+ +PNV + L+ LC + R E LL+ M GL IT I
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREG---RIVEAVALLDRMMEDGLQPTQITYGTI 225
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 150/326 (46%), Gaps = 13/326 (3%)
Query: 184 VKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALS 243
VK E+E ++E+ N LI+ K + ++ + G G N TY I+
Sbjct: 564 VKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWC 623
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS 303
+ + D A+S +M E G + ++S + G+ EA+++ + +P
Sbjct: 624 KEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHE 683
Query: 304 VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKT 359
FL S + ++ D LD E+ K + P ++ I LC+ V A+
Sbjct: 684 --CFLKSDI--RYAAIQKIADSLD----ESCKTFLLPNNIVYNIAIAGLCKTGKVDDARR 735
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
S + +G P N + ++I YS AG++ A + M RGL P++ TY L++G
Sbjct: 736 FFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLC 795
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
++ A + ++ + + VTY+TLI GYCK+ D A KL ++M + G+ P+V
Sbjct: 796 KSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVV 855
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDM 505
Y+ LI LC K D + KLL M
Sbjct: 856 TYSALINGLC-KHGDIERSMKLLNQM 880
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 161/378 (42%), Gaps = 48/378 (12%)
Query: 179 ALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFT 238
+WD + +G + + + + ++ ++ + G K A VF+ G G + + +
Sbjct: 140 VIWD--ELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSL 197
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA----HVVYTLAR 294
+ L + A V ++MI G +PD V +++ FCK GK EA + L
Sbjct: 198 LNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGV 257
Query: 295 EKKMYPPQSVV-------------------------------AFLISSLCQE---DETVK 320
E + S++ LI C++ DE K
Sbjct: 258 EPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEK 317
Query: 321 LALDMLDD--FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+ M ++ + R Y + +I CR + A LL +M+ G + NS
Sbjct: 318 VLRGMQEEAALVPDERAYGV-----LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNS 372
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I+ Y K G++ A ++ M LKPD Y+Y L+ GY G EA + ++ +
Sbjct: 373 LINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEG 432
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
+ +TY+TL++G C++ FD AL++ + M GV P+ Y+ L+ L K ++ A
Sbjct: 433 IEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGL-FKMENFEGA 491
Query: 499 EKLLEDMRLKGLHLNGIT 516
L +D+ +G + IT
Sbjct: 492 STLWKDILARGFTKSRIT 509
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 126/278 (45%), Gaps = 12/278 (4%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFT-IEALSRRKIFDWAWSV 254
+ I + +++ +LG+ A + K D+G + E + + I + +KI D
Sbjct: 646 NIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDES 705
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI---SS 311
C+ + LP++ I+ CK GK +A +++ K P LI S+
Sbjct: 706 CKTFL----LPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSA 761
Query: 312 LCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
DE +L +ML I ++++I LC+ ++V A+ L K+ +G P
Sbjct: 762 AGNVDEAFRLRDEMLR----RGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFP 817
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+N++I Y K G+M A ++ M G+ P V TY+ L++G G +E + ++L
Sbjct: 818 NVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLL 877
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
N+ K + Y TL++GY + E KL + M
Sbjct: 878 NQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMM 915
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 116/296 (39%), Gaps = 36/296 (12%)
Query: 229 VANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHV 288
V ++ Y I+ R D A + ++M+ G + +I+ +CK G+ EA
Sbjct: 329 VPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEG 388
Query: 289 VYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSL 348
V T + + P L+ C+E T + A ++ D E + + ++++++ L
Sbjct: 389 VITRMVDWNLKPDSYSYNTLLDGYCREGHTSE-AFNLCDKMLQEGIEPTVLTYNTLLKGL 447
Query: 349 CR-----------------------------------MKDVHGAKTLLSKMISEGPPPGN 373
CR M++ GA TL +++ G
Sbjct: 448 CRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSR 507
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
FN++IS K G M A E+ M+ G PD TY L+ GY + +A ++
Sbjct: 508 ITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGA 567
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
++ S Y++LI G K LL EM G+ PN+ Y LI C
Sbjct: 568 MEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWC 623
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 141/350 (40%), Gaps = 40/350 (11%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
L+ C + + L D + +G K + I N LI + K G+ A V +
Sbjct: 337 VLIDGYCRTGKIDDAVRLLDEMLRLGLKT----NLFICNSLINGYCKRGEIHEAEGVITR 392
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
D+ + +Y ++ R A+++C+KM++ G P ++ C+ G
Sbjct: 393 MVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGA 452
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+A ++ L ++ + P + + L+ L + E + A + D + F+
Sbjct: 453 FDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKM-ENFEGASTLWKDILARGFTKSRITFN 511
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD-------------- 388
++I LC+M + A+ + KM G P + ++I Y KA +
Sbjct: 512 TMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMERE 571
Query: 389 -MTPAMEM--------------------LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
++P++EM L M RGL P++ TY L+ G+ G +++A
Sbjct: 572 PISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKA 631
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
E +N + + T++ G +L D A L+ +M D G P+
Sbjct: 632 FSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD 681
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 149/356 (41%), Gaps = 22/356 (6%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+LL C ++ AL+D + +G + V LI K A E+FN+
Sbjct: 157 SLLHGFCHWNRIEDALALFDQIVGMGFRPN----VVTYTTLIHCLCKNRHLNHAVEIFNQ 212
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDW---AWSVCEKMIETGSLPDSEKVGKIISWFCK 279
GD G N TY + L +I W AW + M++ G P+ +I F K
Sbjct: 213 MGDNGIRPNVVTYNSLVSGLC--EIGRWSDAAW-LLRDMMKRGIQPNVITFTALIDAFVK 269
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC---QEDETVKLALDMLDDFSGEARKY 336
GK EA +Y + + +YP LI+ LC + DE ++ M E+ Y
Sbjct: 270 VGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLM------ESNGY 323
Query: 337 AIK--PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
++++I C+ K V + +M +G + +I Y G A E
Sbjct: 324 YPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQE 383
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+ M SR PD+ TY L+ G G +E+A I +K ++ VTY +I+G C
Sbjct: 384 VFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMC 443
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
K+ + + A L + G++PNV Y +I C + A+ L + M+ G
Sbjct: 444 KVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGF-IHEADALFKKMKEDGF 498
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 110/234 (47%), Gaps = 1/234 (0%)
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
KM++ G PD ++ FC + ++A ++ P LI LC+ +
Sbjct: 142 KMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCK-N 200
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ A+++ + + + ++S++ LC + A LL M+ G P F
Sbjct: 201 RHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITF 260
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
++I A+ K G + A E+ K+M + PDV+TYT L++G G+++EA ++ +
Sbjct: 261 TALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMES 320
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
N + VTY TLI G+CK + + K+ EM G+ N Y LIQ CL
Sbjct: 321 NGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCL 374
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 98/202 (48%), Gaps = 2/202 (0%)
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
ALD+ +I F+ ++ + +MK +L +M G P N V++
Sbjct: 66 ALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMN 125
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
++ A L M G +PD+ T+T L+ G+ + ++E+A + ++ R
Sbjct: 126 CVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRP 185
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+ VTY TLI CK + A+++ N+M D G++PNV YN L+ LC + W A L
Sbjct: 186 NVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLC-EIGRWSDAAWL 244
Query: 502 LEDMRLKGLHLNGIT-RALIRA 522
L DM +G+ N IT ALI A
Sbjct: 245 LRDMMKRGIQPNVITFTALIDA 266
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 146/333 (43%), Gaps = 13/333 (3%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V + + LI ++GK + A +F++ G AN TY I A R ++ A
Sbjct: 114 VIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFS 173
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC--- 313
+M+ G LPD +I K GK +EA+ ++ L ++ P L++ LC
Sbjct: 174 QMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHH 233
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
Q D V+L M++ K + ++++I C A TL KM E P
Sbjct: 234 QMDHAVRLFEVMVE----RGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSI 289
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+ ++ A + G + A E+ M+ G P + TYT L+ G G +EEA ++
Sbjct: 290 TTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRS 349
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
K + S Y LI G + ++ A+++ +E+ VG+ PN+ YN +I LC K
Sbjct: 350 LKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLC-KEG 408
Query: 494 DWRTAEKLLEDMRLKG-----LHLNGITRALIR 521
AE+L M G + N I R ++
Sbjct: 409 KLLEAERLFVQMEESGCEQDEISFNFIIRGFLQ 441
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 143/299 (47%), Gaps = 2/299 (0%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
GK A E+F+K G + Y + I AL + + A + +M+ +
Sbjct: 23 GKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVELHRRMLSEICSGNFFTY 82
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
G +I CK G A + ++ + P V + LI+ LC+ + ++ A+++ D+
Sbjct: 83 GLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGK-LREAVNLFDEMV 141
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
+ K + ++S+I + CR A S+M+ EG P F ++I SK G +
Sbjct: 142 SQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQ 201
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A ++ +LM +G P++ TY L++G QM+ A + + ++ ++Y+TLI
Sbjct: 202 EAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLI 261
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
GYC + + A+ L +M+ + P++ Y L+++L RTA++L +M++ G
Sbjct: 262 NGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNG-RIRTAKELFNNMQICG 319
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 139/329 (42%), Gaps = 5/329 (1%)
Query: 161 VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVF 220
V L+K +C + L+D + G + +L ++N L K + + A E+
Sbjct: 12 VSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINAL----RKTRQARRAVELH 67
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ C N TY I++L + + + +MI G P+ +I+ C+
Sbjct: 68 RRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRV 127
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
GK +EA ++ + + LI + C+ K A GE +
Sbjct: 128 GKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFG-LWKEATRTFSQMVGEGILPDVVT 186
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F+++I L + V A + MI +G P +NS+++ M A+ + ++M
Sbjct: 187 FTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMV 246
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
RG+K DV +Y L++GY G+ EEA + + + S TY L++ +
Sbjct: 247 ERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIR 306
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A +L N M+ G P++D Y L+ LC
Sbjct: 307 TAKELFNNMQICGQSPSLDTYTVLLDGLC 335
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 132/287 (45%), Gaps = 2/287 (0%)
Query: 192 KGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDW 250
+G+L V LI SK GK + A+++F G N TY + L D
Sbjct: 178 EGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDH 237
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A + E M+E G D +I+ +C GK +EA ++ + +++ P + L+
Sbjct: 238 AVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLK 297
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
+L Q ++ A ++ ++ + ++ ++ ++ LC+ + A + + S
Sbjct: 298 ALYQNGR-IRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYK 356
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P +++ +I +A AME+ + + GL P++ TY +++G G++ EA +
Sbjct: 357 PSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERL 416
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
+ +++ ++++ +IRG+ + + A++ L M++ PN
Sbjct: 417 FVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPN 463
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 156/346 (45%), Gaps = 6/346 (1%)
Query: 165 LKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFG 224
++ C G + L D ++ G K V N LI K G+ A + N
Sbjct: 89 VQTTCKESGVGQAMKLLDEMRNKGSKPD----VVTYNVLINGICKEGRLDEAIKFLNNMP 144
Query: 225 DYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAK 284
YGC N T+ + ++ + A + M+ G P +I++ C+ G
Sbjct: 145 SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLG 204
Query: 285 EAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSV 344
A + P L+ C+E + + A++ LD I ++++
Sbjct: 205 RAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDR-AIEYLDIMVSRGCYPDIVTYNTL 263
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
+ +LC+ V A +L+++ S+G P +N+VI SK G A+++L MR +GL
Sbjct: 264 LTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGL 323
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
KPD+ TY+ L+SG + G+++EA + ++ + R + +TY++++ G CK + D A+
Sbjct: 324 KPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAID 383
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
L M +P Y LI+ + + L + A LL ++ +GL
Sbjct: 384 FLAYMISKRCKPTEATYTILIEGIAYEGLA-KEALDLLNELCSRGL 428
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 134/298 (44%), Gaps = 11/298 (3%)
Query: 228 CVANQETYY---------FTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
C NQ+T + F ++ + A + ++M GS PD +I+ C
Sbjct: 69 CCINQQTLFPCFSLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 128
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
K G+ EA P ++ S+C + A +L D + ++
Sbjct: 129 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMD-AEKLLSDMLRKGCSPSV 187
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
F+ +I LCR + A +L KM G P + +N ++ + K M A+E L +
Sbjct: 188 VTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDI 247
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M SRG PD+ TY L++ G+++ A EILN+ +TY+T+I G K+ +
Sbjct: 248 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGK 307
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ A+KLL+EM+ G++P++ Y+ L+ L + A K D+ G+ N IT
Sbjct: 308 TERAIKLLDEMRRKGLKPDIITYSSLVSGLSREG-KVDEAIKFFHDLEGLGIRPNAIT 364
>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 800
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 184/434 (42%), Gaps = 51/434 (11%)
Query: 145 LGENLVCFFK-WVTSGVVDA-----LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVE 198
L ++ V FK SG+ DA L+ +C +E LW+ + E G K V
Sbjct: 367 LWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHS 426
Query: 199 IL---------NELIALFSKL-GKG-----------------KAAFE----VFNKFGDYG 227
+L +E + L++++ GKG KAAF+ + + G
Sbjct: 427 LLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNG 486
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCE-----KMIET-GSLPDSEKVGKIISWFCKGG 281
N TY I L VCE K ET G +P + II+ F K G
Sbjct: 487 VSCNDYTYNTLINGLC------VVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAG 540
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
A VY K + P I C+ LAL ML+D + + I +
Sbjct: 541 MMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKT-SCCDLALKMLNDVRCKGLRPDIAAY 599
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+S+I C+ ++ A +L M+ +G P +V+NS I+ Y M A+ + + M
Sbjct: 600 NSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIK 659
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+ D TYT L+ G++ G + A ++ +E + +T+ L G C+ + D
Sbjct: 660 EGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDD 719
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIR 521
A KLL+EM + ++PNV YN LI L+ + A +L ++M + + + T ++
Sbjct: 720 ARKLLDEMNRLDIRPNVLMYNMLINGY-LRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778
Query: 522 AVKELEEDAIENGE 535
+K L D+ + E
Sbjct: 779 GMKSLGSDSPIDAE 792
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 151/378 (39%), Gaps = 53/378 (14%)
Query: 152 FFKW--VTSGVVDALLKAICSSVGK-KEVYALWDIVKEIGEKEKGVLTVEILNELIALFS 208
F W + VVD L+K G+ +E + D + G+K VL +++ +
Sbjct: 243 FVPWDFTFNSVVDVLVKG-----GRMEEALHIKDELLATGKKMSVVLATTLMHG----YC 293
Query: 209 KLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSE 268
+ + A ++F + G V TY I + + + A+ +C +M + G LP +
Sbjct: 294 LQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTN 353
Query: 269 KVGKI----------------------------------ISWFCKGGKAKEAHVVYTLAR 294
+ + I W C+ K +EA ++
Sbjct: 354 EFNMVIKGLLNDKLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMN 413
Query: 295 EKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRM 351
E + P L+ C DE VKL +M G+ + ++++++
Sbjct: 414 ETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEM----PGKGFTPNVVTYTTLMKGHINK 469
Query: 352 KDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTY 411
A LL++M G + +N++I+ G + EMLK + G P TY
Sbjct: 470 AAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTY 529
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
+++G+ G M A + + + VTY + I GYCK D ALK+LN+++
Sbjct: 530 NSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRC 589
Query: 472 VGVQPNVDEYNKLIQSLC 489
G++P++ YN LI C
Sbjct: 590 KGLRPDIAAYNSLIFGFC 607
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 87/169 (51%), Gaps = 1/169 (0%)
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
S I SLC+++D + A +L KM G P + FNSV+ K G M A+ + + +
Sbjct: 216 SVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLA 275
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G K V T LM GY ++ +A +I E ++ + VTY LIRG + +
Sbjct: 276 TGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEK 335
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
A +L +M+D G+ P+ +E+N +I+ L L W+ A L ++M G+
Sbjct: 336 AYELCRQMRDHGLLPSTNEFNMVIKGLLNDKL-WKDAVSLFKEMADSGI 383
>gi|42567647|ref|NP_568141.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|122223689|sp|Q0WMY5.1|PP365_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g04810, chloroplastic; AltName: Full=Maize PPR4
homolog; Short=AtPPR4; Flags: Precursor
gi|110739199|dbj|BAF01515.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
gi|332003406|gb|AED90789.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 952
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 149/348 (42%), Gaps = 14/348 (4%)
Query: 178 YALWDIVKEIGEKEKGVLTVEILNE------------LIALFSKLGKGKAAFEVFNKFGD 225
+ + D + +++KG++ + L E LI L++K+GK A EV +
Sbjct: 453 HTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKE 512
Query: 226 YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKE 285
G N +TY I + K + A++V E M++ G PD IIS FC G
Sbjct: 513 EGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDR 572
Query: 286 AHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVI 345
A ++ + P +I + + ++ +L++ D + F+ +I
Sbjct: 573 AIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD-MRRSLEVFDMMRRCGCVPTVHTFNGLI 631
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
L + + A +L +M G + ++ Y+ GD A E +++ GL
Sbjct: 632 NGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLD 691
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
D++TY L+ G+M+ A + E + + Y+ LI G+ + + A L
Sbjct: 692 VDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADL 751
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
+ +MK GV+P++ Y I S C KA D A + +E+M G+ N
Sbjct: 752 IQQMKKEGVKPDIHTYTSFI-SACSKAGDMNRATQTIEEMEALGVKPN 798
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 134/346 (38%), Gaps = 37/346 (10%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
++ + + G A E F + G Y I A + + D A S KM E G
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 374
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
I+ F K G A+ A + A+ S+ +I + CQ ++ A
Sbjct: 375 IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTC-NMERA 433
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++ + E I + +++ + D + ++ G P + +I+
Sbjct: 434 EALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINL 493
Query: 383 YSKAGDMTPAMEMLKLMR-----------------------------------SRGLKPD 407
Y+K G ++ A+E+ ++M+ G+KPD
Sbjct: 494 YTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPD 553
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
V Y ++S + G M+ A + + E +K R + T+ +I GY K + +L++ +
Sbjct: 554 VILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFD 613
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
M+ G P V +N LI L K A ++L++M L G+ N
Sbjct: 614 MMRRCGCVPTVHTFNGLINGLVEKR-QMEKAVEILDEMTLAGVSAN 658
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 93/194 (47%), Gaps = 11/194 (5%)
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSV-----------IRSLCRMKDVHGAK 358
SS QE E + +L + D +G+ + I F + ++ R D+H A+
Sbjct: 270 SSWHQEREGSRKSLQRILDTNGDNWQAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRAR 329
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+M + G P + ++ S+I AY+ DM A+ ++ M+ G++ + TY+ ++ G+
Sbjct: 330 ETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGF 389
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
+ G E A +EAK+ H L+ Y +I +C+ + A L+ EM++ G+ +
Sbjct: 390 SKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPI 449
Query: 479 DEYNKLIQSLCLKA 492
Y+ ++ + A
Sbjct: 450 AIYHTMMDGYTMVA 463
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 108/279 (38%), Gaps = 37/279 (13%)
Query: 184 VKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALS 243
VKE+ +K + T +I ++K G + + EVF+ GCV T+ I L
Sbjct: 577 VKEM-QKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLV 635
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS 303
++ + A + ++M G + KI+ + G +A +T + + +
Sbjct: 636 EKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIF 695
Query: 304 VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSK 363
L+ + C+ ++ AL + + S ++ +I R DV A L+ +
Sbjct: 696 TYEALLKACCKSGR-MQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQ 754
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPA------MEMLKL------------------- 398
M EG P + S ISA SKAGDM A ME L +
Sbjct: 755 MKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASL 814
Query: 399 ----------MRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
M++ G+KPD Y L++ + + EA
Sbjct: 815 PEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEA 853
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 159/347 (45%), Gaps = 6/347 (1%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
L++A C+ G + L D + G K V N L+ K G+ A + N
Sbjct: 22 LIEATCAESGVGQAMKLLDEMGSRGCKPD----VVTYNVLVNGMCKEGRLDEAIKFLNSM 77
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
YG N T+ + ++ + A + +M+ G P +I++ C+ G
Sbjct: 78 PSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLL 137
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
A + P L+ C+E + + A+ L+ I +++
Sbjct: 138 GRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDR-AIQYLEIMVSRGCYPDIVTYNT 196
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
++ +LC+ V A LL+++ S+G P +N+VI SK G A+E+L MR +G
Sbjct: 197 MLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKG 256
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
LKPDV TY+ L++G + G++EEA + ++ + + + TY++++ G CK ++ D A+
Sbjct: 257 LKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAI 316
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
L M G +P Y LI+ + + L + A +LL ++ +G+
Sbjct: 317 DFLAYMISKGCKPTEVSYTILIEGIANEGL-AKEALELLNELCSRGV 362
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 127/272 (46%), Gaps = 1/272 (0%)
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
EV ++ + C + TY IEA A + ++M G PD +++
Sbjct: 1 MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
CK G+ EA P ++ S+C + A +L + +
Sbjct: 61 MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMD-AEKLLTEMVRKGCSP 119
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
++ F+ +I LCR + A +L KM + G P + +N ++ + K M A++ L
Sbjct: 120 SVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYL 179
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
++M SRG PD+ TY +++ G+++ A E+LN+ +TY+T+I G K+
Sbjct: 180 EIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKV 239
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ D A++LL+EM+ G++P+V Y+ LI L
Sbjct: 240 GKTDQAVELLHEMRGKGLKPDVITYSSLIAGL 271
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 74/146 (50%), Gaps = 1/146 (0%)
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P + +I A + AM++L M SRG KPDV TY L++G G+++EA +
Sbjct: 14 PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
LN S+ + +T++ ++R C + A KLL EM G P+V +N LI LC
Sbjct: 74 LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133
Query: 491 KALDWRTAEKLLEDMRLKGLHLNGIT 516
K L R + +LE M G N ++
Sbjct: 134 KGLLGRAID-ILEKMPTHGCTPNSLS 158
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
ME+L + PDV TYT L+ + +A ++L+E + VTY+ L+ G
Sbjct: 1 MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
CK D A+K LN M G QPNV +N +++S+C W AEKLL +M KG
Sbjct: 61 MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTG-RWMDAEKLLTEMVRKG 116
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 1/176 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++ +I + C V A LL +M S G P +N +++ K G + A++ L M
Sbjct: 19 YTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMP 78
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
S G +P+V T+ ++ + G+ +A ++L E + S VT++ LI C+
Sbjct: 79 SYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLG 138
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A+ +L +M G PN YN L+ C K A + LE M +G + + +T
Sbjct: 139 RAIDILEKMPTHGCTPNSLSYNPLLHGFC-KEKKMDRAIQYLEIMVSRGCYPDIVT 193
>gi|410109877|gb|AFV61018.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
lycioides]
Length = 397
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 124/244 (50%), Gaps = 2/244 (0%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
+I+ + + G ++A Y L RE K + P ++ L + + KL ++
Sbjct: 61 LITAYLESGFLRDAXECYRLTREHKFWVPFDTCRKVLEHL-MKLKYFKLVWGFYEEILEC 119
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
++ F+ ++ C+ D+ A+++ + + G P FN++++ Y + GDM
Sbjct: 120 GYPASLYFFNILMHRFCKEGDIMVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDMDEG 179
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
+ M + G++PDVYTY+ L++G +M++A E+ +E + VT+ TLI G
Sbjct: 180 FRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTFTTLIDG 239
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
+CK D A+++ +M + P++ YN LI LC K D + A L+++M +KGL
Sbjct: 240 HCKNGRVDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKG-DLKQAHDLIDEMSMKGLKP 298
Query: 513 NGIT 516
+ IT
Sbjct: 299 DKIT 302
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 161/381 (42%), Gaps = 43/381 (11%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L++ + S GK A++ + E ++ + + + LI + + G + A E +
Sbjct: 23 SLIQVVVSRKGKGSASAVFAAILETKGTQRS--DIYVFSGLITAYLESGFLRDAXECYRL 80
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
++ +T +E L + K F W E+++E G ++ FCK G
Sbjct: 81 TREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGD 140
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAF----------------------------------- 307
A V+ + + P SVV+F
Sbjct: 141 IMVAQSVFNAITKWGLRP--SVVSFNTLMNGYIRLGDMDEGFRLKNAMHASGVQPDVYTY 198
Query: 308 --LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI 365
LI+ LC+E + + A +M D+ + F+++I C+ V A + +M+
Sbjct: 199 SVLINGLCKESK-MDDANEMFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 257
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
S+ P +N++I K GD+ A +++ M +GLKPD TYT L+ G G +E
Sbjct: 258 SQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLE 317
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
A E + RL V Y LI G C+ E + A K+L EM VG++P+ Y +I
Sbjct: 318 TAFEHRKRMIQEXIRLDDVAYTALISGLCQEERYLDAEKVLREMLSVGLKPDTGTYTMII 377
Query: 486 QSLCLKALDWRTAEKLLEDMR 506
C K W T KLL++M+
Sbjct: 378 NEFCKKGDVW-TGSKLLKEMQ 397
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 147/322 (45%), Gaps = 4/322 (1%)
Query: 190 KEKGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
KEKG++ V + LI+ F K G+ + AFE+ ++ G N Y ++ L +
Sbjct: 551 KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDI 610
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
A + + M E G PDS +I +CK EA ++ K + P V L
Sbjct: 611 QRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL 670
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
+ C+E + K A+++ + + + F+++I C+ + A L +MI++
Sbjct: 671 VHGCCKEGDMEK-AMNLFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQ 728
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P + + +VI + KAG M A + K M+ R L D TYT LM GY GQ E
Sbjct: 729 IMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVF 788
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ + + VTY +I +CK + A KL +E+ G+ ++ LI +L
Sbjct: 789 ALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITAL 848
Query: 489 CLKALDWRTAEKLLEDMRLKGL 510
C K D A KLL++M GL
Sbjct: 849 C-KREDLTEASKLLDEMGELGL 869
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 148/351 (42%), Gaps = 37/351 (10%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI K GK + A E+ GC N T+ IE R A + ++M +
Sbjct: 283 NVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEK 342
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
+P + G +I+ C A+ + + P V + LI E ++
Sbjct: 343 RNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGR-IE 401
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLL------------------- 361
A +LD S I ++++I L + + A T L
Sbjct: 402 EARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFI 461
Query: 362 ----------------SKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
+M+ G P N ++ +I+ + KAG++ A+ + + + + G+
Sbjct: 462 LGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVL 521
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
PDV T + + G G+++EA ++ +E K+ TY +LI G+CK E + A +L
Sbjct: 522 PDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFEL 581
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+EM G+ PN+ YN L+ LC K+ D + A KL + M KGL + +T
Sbjct: 582 HDEMCLKGIAPNIFIYNALVDGLC-KSGDIQRARKLFDGMPEKGLEPDSVT 631
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 140/356 (39%), Gaps = 49/356 (13%)
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
G+ G V N TY L R K + A E+M +TG PD +I F + G
Sbjct: 201 GEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDI 260
Query: 284 KEAH--------------------VVYTLAREKKM---------------YPPQSVVAFL 308
E +++ L + KM P L
Sbjct: 261 DEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLL 320
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
I C+E + AL++LD+ + + ++I LC KD+ A LL KM G
Sbjct: 321 IEGYCREHNMGR-ALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 379
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P V++++I Y+ G + A +L M G+ PD++ Y ++S + G+MEEA
Sbjct: 380 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 439
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
L E + + VT+ I GY K + A K +EM D G+ PN Y LI
Sbjct: 440 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 499
Query: 489 --------CLKALDWRTAEKLLEDMR-----LKGLHLNGITRALIRAVKELEEDAI 531
L A +L D++ + GL NG + ++ EL+E +
Sbjct: 500 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGL 555
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 135/314 (42%), Gaps = 2/314 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V + + LI ++ G+ + A + + G + Y I LS+ + A +
Sbjct: 384 VVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLL 443
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
++ G PD+ G I + K GK EA + + + P + LI+ +
Sbjct: 444 EIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAG 503
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
++ AL + ++ S+ I L + V A + S++ +G P +
Sbjct: 504 NLME-ALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTY 562
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
+S+IS + K G++ A E+ M +G+ P+++ Y L+ G G ++ A ++ + +
Sbjct: 563 SSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPE 622
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
VTY T+I GYCK E A L +EM GVQP+ YN L+ C K D
Sbjct: 623 KGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHG-CCKEGDME 681
Query: 497 TAEKLLEDMRLKGL 510
A L +M KG
Sbjct: 682 KAMNLFREMLQKGF 695
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 124/306 (40%), Gaps = 41/306 (13%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
++ C S E ++L+ + G + + N L+ K G + A +F +
Sbjct: 634 TMIDGYCKSENVAEAFSLFHEMPSKGVQPHSF----VYNALVHGCCKEGDMEKAMNLFRE 689
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G A ++ I+ + A + ++MI +PD +I W CK GK
Sbjct: 690 MLQKG-FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGK 748
Query: 283 AKEAHVVYTLAREKK-----------MY------------------------PPQSVVAF 307
+EA++++ +E+ MY P +
Sbjct: 749 MEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGL 808
Query: 308 LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
+I + C+ED V+ A + D+ G+ +I +LC+ +D+ A LL +M
Sbjct: 809 VIYAHCKEDNLVE-AFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGEL 867
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P A ++++ ++ +AG M A + + ++S GL PD T L++G N E+A
Sbjct: 868 GLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDA 927
Query: 428 CEILNE 433
++ +
Sbjct: 928 RNLIKQ 933
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 84/188 (44%), Gaps = 11/188 (5%)
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+ MLD+ A + + S++ SL R L M +G P + + +
Sbjct: 169 MGMLDE---AANVFFVAKNDSILISLIRCNS-------LRSMGEKGLVPNTYTYTIITAG 218
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+A M A + M+ GLKPD + L+ G+ G ++E I + ++
Sbjct: 219 LCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPIN 278
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
+TY+ LI G CK + + A ++L M +G +PN + LI+ C + + A +LL
Sbjct: 279 LITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYC-REHNMGRALELL 337
Query: 503 EDMRLKGL 510
++M + L
Sbjct: 338 DEMEKRNL 345
>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 624
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 148/333 (44%), Gaps = 11/333 (3%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
LLK +C ++ L I+ + K + L V +I + G+ A+ +F+
Sbjct: 176 LLKGLCDDKTSQQALDLLHIMAD--HKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAM 233
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
D G + TY I ALS+ + D A V +M++ G +PD ++ +C GK
Sbjct: 234 LDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKP 293
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
KEA ++ + P L+ LC+ ++ + A + D K KP S+
Sbjct: 294 KEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTE-ARKIFDSLV----KRGHKPDST 348
Query: 344 VIRSLCRMKDVHGA----KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
+L GA LL M+ +G G+ +FN ++ AY+K + A+ + M
Sbjct: 349 TYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNM 408
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
R +GL PD+ Y ++ G++++A N K + V + TLI G C +++
Sbjct: 409 RQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKW 468
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
D +L EM D G+ + +N ++ +LC K
Sbjct: 469 DKVEELAFEMIDRGICLDTIFFNAIMGNLCKKG 501
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 144/343 (41%), Gaps = 11/343 (3%)
Query: 152 FFKWVTSGVV------DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIA 205
F + V +GV+ +L+ CSS KE ++ + G + V +++ L
Sbjct: 265 FTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYL-- 322
Query: 206 LFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLP 265
K GK A ++F+ G + TY + + + + M++ G
Sbjct: 323 --CKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQL 380
Query: 266 DSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDM 325
I+ + K K EA +V++ R++ + P ++ LC V AL
Sbjct: 381 GHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGR-VDDALSQ 439
Query: 326 LDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSK 385
+ E I F+++I LC + L +MI G FN+++ K
Sbjct: 440 FNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCK 499
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
G + A + LM G++P+ TY L+ GY G+M+EA ++L N + S VT
Sbjct: 500 KGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVT 559
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
Y+T+I GY + + L LL EM GV P + Y L+Q L
Sbjct: 560 YNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGL 602
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 127/305 (41%), Gaps = 10/305 (3%)
Query: 216 AFEVFNKFGDYGCVA---NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGK 272
A +FN+ G + N TY I R D A++ ++I TG
Sbjct: 80 AISLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSP 139
Query: 273 IISWFCKGGKAKEA-HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLD---D 328
++ C + +A +V E P L+ LC +D+T + ALD+L D
Sbjct: 140 LLKGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLC-DDKTSQQALDLLHIMAD 198
Query: 329 FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD 388
G + +++VI L R + A +L M+ GP P ++S+ISA SK
Sbjct: 199 HKGRC-PLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQA 257
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHT 448
M A ++ M G+ PD YT L+ GY + G+ +EA I + ++ VTY
Sbjct: 258 MDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTA 317
Query: 449 LIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLK 508
L+ CK + A K+ + + G +P+ Y L+ + LL+ M K
Sbjct: 318 LMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGA-LVEMHDLLDLMMKK 376
Query: 509 GLHLN 513
G+ L
Sbjct: 377 GMQLG 381
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/302 (19%), Positives = 118/302 (39%), Gaps = 38/302 (12%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+ +C + E ++D + + G K +L+ ++ G ++ +
Sbjct: 317 ALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHG----YATEGALVEMHDLLDL 372
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + + A ++ D A V M + G PD G ++ C G+
Sbjct: 373 MMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGR 432
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLC---QEDETVKLALDMLD------------ 327
+A + + + + P V LI LC + D+ +LA +M+D
Sbjct: 433 VDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNA 492
Query: 328 ---DFSGEAR------------KYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEG 368
+ + R + I+P ++++I C + A LL M+ G
Sbjct: 493 IMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNG 552
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P + +N++I+ YS+ G + + +L+ M +G+ P + TY L+ G G+ A
Sbjct: 553 VKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAK 612
Query: 429 EI 430
E+
Sbjct: 613 EL 614
>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
Length = 563
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 115/264 (43%)
Query: 226 YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKE 285
YG + T + +L + F +M+ETG+ P+ I CK K+
Sbjct: 102 YGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQ 161
Query: 286 AHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVI 345
A V + + P LI LC+ T + L + K + ++ +I
Sbjct: 162 AFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMI 221
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
CR + A+ LL +M+ +G P + ++I + K G A E++ M+ G
Sbjct: 222 GGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFL 281
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
P++YTY ++ G+ G+++EA ++L A + +TY LI +CK AL L
Sbjct: 282 PNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDL 341
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLC 489
+ M + G P+++ Y LI + C
Sbjct: 342 FDRMVENGCCPDIEAYTSLISTYC 365
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 145/328 (44%), Gaps = 11/328 (3%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
E++ ++A F + G+ A ++ + +G ET + + F +A V +
Sbjct: 4 EVMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDG 63
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M G P + G ++ C+ GK +E + + ++ SLC++
Sbjct: 64 MTRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGR 123
Query: 318 TVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
+ +F + P +++ I LC+ + V A +L +M+ G P
Sbjct: 124 -----FKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNV 178
Query: 374 AVFNSVISAYSKAGDMTPAMEM-LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
++I K G A + LKL++S KP+V+TYT ++ GY G++ A +L
Sbjct: 179 YTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLV 238
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
+ + + TY TLI G+CK FD A +L+N+MK G PN+ YN +I C K
Sbjct: 239 RMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKG 298
Query: 493 LDWRTAEKLLEDMRLKGLHLNGITRALI 520
+ A K+L +GL + IT ++
Sbjct: 299 -KIQEAYKVLRMATSQGLKFDKITYTIL 325
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 145/332 (43%), Gaps = 6/332 (1%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ K E F + + G N Y I+ L +R+ A+ V E+M+ G P+
Sbjct: 122 GRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTH 181
Query: 271 GKIISWFCKGGKAKEAHVVY-TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDF 329
+I CK G + A ++ L + P +I C+E + + + +L
Sbjct: 182 TTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEM-LLVRM 240
Query: 330 SGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
+ K ++++I C+ A L++KM EG P +N+VI + K G +
Sbjct: 241 VEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKI 300
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
A ++L++ S+GLK D TYT L++ + G + A ++ + +N Y +L
Sbjct: 301 QEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSL 360
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
I YC+ + + + K ++ +G+ P Y +I C K A ++ E M G
Sbjct: 361 ISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYC-KVGRSTLALRVFERMVQNG 419
Query: 510 LHLNGITR-ALIRAVKELEEDAIENGEALVEA 540
+ IT ALI + +E +E +AL E
Sbjct: 420 CFADSITYGALISGL--CKESRLEEAKALYEG 449
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 110/277 (39%), Gaps = 6/277 (2%)
Query: 203 LIALFSKLGKGKAAFEVFNKF---GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
LI K+G + AF +F K Y N TY I R A + +M+
Sbjct: 184 LIDGLCKIGWTERAFRLFLKLIKSSSYK--PNVHTYTVMIGGYCREGKLARAEMLLVRMV 241
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
E G P++ +I CKGG A + +++ P +I C++ + +
Sbjct: 242 EQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGK-I 300
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
+ A +L + + K+ ++ +I C+ + A L +M+ G P + S+
Sbjct: 301 QEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSL 360
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
IS Y + M + + GL P TYT +++GY G+ A + +N
Sbjct: 361 ISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGC 420
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
+TY LI G CK + A L M D + P
Sbjct: 421 FADSITYGALISGLCKESRLEEAKALYEGMLDKRLVP 457
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 4/199 (2%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+E LI+ + + + + + + F+K G + ++TY I + A V E
Sbjct: 354 IEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFE 413
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M++ G DS G +IS CK + +EA +Y +K++ P + L C+ +
Sbjct: 414 RMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRRE 473
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+T +A+ +LD ++ + V+R L + DV A L K++ E +A +
Sbjct: 474 KT-SIAVSVLDRLD---KRQQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATY 529
Query: 377 NSVISAYSKAGDMTPAMEM 395
I++ + A EM
Sbjct: 530 TGFINSCYENNRYALASEM 548
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 154/334 (46%), Gaps = 19/334 (5%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEI---GEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
++K +CSS ++ ++IVKE+ G + V I LI F + + A V
Sbjct: 422 TVVKGMCSS---GDLDGAYNIVKEMIASGCRP----NVVIYTTLIKTFLQNSRFGDAMRV 474
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
+ + G + Y I LS+ K D A S +M+E G P++ G IS + +
Sbjct: 475 LKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIE 534
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA---LDMLDD-FSGEARK 335
+ A RE + P + + LI+ C++++ ++ M+D G+A+
Sbjct: 535 ASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKT 594
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
Y + ++ L + V A+ + +M +G P + +I+ +SK G+M A +
Sbjct: 595 YTV-----LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
M GL P+V Y L+ G+ G++E+A E+L+E + VTY T+I GYCK
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ A +L +EMK G+ P+ Y L+ C
Sbjct: 710 SGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC 743
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 123/267 (46%), Gaps = 5/267 (1%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G + TY I+ L + + D A + +M+ G I K G ++A
Sbjct: 307 GVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKA 366
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS--SV 344
++ + P A LI C+E + V+ ++L + + R I P++ +V
Sbjct: 367 KALFDGMIASGLIPQAQAYASLIEGYCRE-KNVRQGYELLVEM--KKRNIVISPYTYGTV 423
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
++ +C D+ GA ++ +MI+ G P ++ ++I + + AM +LK M+ +G+
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGI 483
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
PD++ Y L+ G + +M+EA L E +N + + TY I GY + EF A K
Sbjct: 484 APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADK 543
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLCLK 491
+ EM++ GV PN LI C K
Sbjct: 544 YVKEMRECGVLPNKVLCTGLINEYCKK 570
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 149/346 (43%), Gaps = 22/346 (6%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI FSKLG + A +F++ + G N Y + R + A + ++M G
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P++ II +CK G EA ++ + K + P V L+ C+ ++ +
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAI 752
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG----PPPGNAVFNS 378
+ G A A PF+++I + + +L++++ P + +N
Sbjct: 753 TIFGTNKKGCASSTA--PFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I K G++ A E+ M++ L P V TYT L++GY G+ E + +EA
Sbjct: 811 MIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAG 870
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL----- 493
+ Y +I + K AL L+++M + VD+ KL S C L
Sbjct: 871 IEPDHIMYSVIINAFLKEGMTTKALVLVDQM---FAKNAVDDGCKLSISTCRALLSGFAK 927
Query: 494 --DWRTAEKLLEDM-RLKGLH-----LNGITRALIRAVKELEEDAI 531
+ AEK++E+M RL+ + + I + I + + +E DA+
Sbjct: 928 VGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQRVEADAV 973
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 126/310 (40%), Gaps = 57/310 (18%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH-VVYTLAREKK 297
++AL R D W V + M+E + D + +I C+ G + V++ +E +
Sbjct: 193 LDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFR 252
Query: 298 MYPPQSVVAFLI--SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVH 355
A + S +C+ +K D+L D LC++K +
Sbjct: 253 TATLNVDGALKLKESMICKGLVPLKYTYDVLID------------------GLCKIKRLE 294
Query: 356 GAKTLL-----------------------------------SKMISEGPPPGNAVFNSVI 380
AK+LL +M+S G +++ I
Sbjct: 295 DAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCI 354
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
SK G M A + M + GL P Y L+ GY + + E+L E KK +
Sbjct: 355 CVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIV 414
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+SP TY T+++G C + D A ++ EM G +PNV Y LI++ L+ + A +
Sbjct: 415 ISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTF-LQNSRFGDAMR 473
Query: 501 LLEDMRLKGL 510
+L++M+ +G+
Sbjct: 474 VLKEMKEQGI 483
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 102/257 (39%), Gaps = 44/257 (17%)
Query: 248 FDWAWSVCEKMIE-------------------TGSLPDSEKVGKIISWFCKGGKAKEAHV 288
F+ A SV E+MIE G D G + + G +EA
Sbjct: 113 FEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVF 172
Query: 289 VYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML-DDFSGEARK---YAIKPFSSV 344
V++ + ++ P S L+ +L + + LD+ D + G + + +K + +
Sbjct: 173 VFSSSMGLELVPRLSRCKVLLDALLRWNR-----LDLFWDVYKGMVERNVVFDVKTYHML 227
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
I + CR +V K +L K E A N + A+++ + M +GL
Sbjct: 228 IIAHCRAGNVQLGKDVLFKTEKEFR---TATLN-----------VDGALKLKESMICKGL 273
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
P YTY L+ G ++E+A +L E L TY LI G K D A
Sbjct: 274 VPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKG 333
Query: 465 LLNEMKDVGVQPNVDEY 481
L++EM G+ N+ Y
Sbjct: 334 LVHEMVSHGI--NIKPY 348
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 121/257 (47%), Gaps = 11/257 (4%)
Query: 264 LPDSE--KVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETV 319
LPD ++ C G+ ++A ++ +M P VV + LI C E +
Sbjct: 257 LPDKNVCSYNILLKVLCGAGRVEDARQLF-----DEMASPPDVVTYGILIHGYCALGE-L 310
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
+ A+ +LDD + ++SV+ LC V A T++ M+ AV+ +V
Sbjct: 311 ENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTV 370
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+S + GD+ A M+ +GL D TYT L++G G+++EA ++L E
Sbjct: 371 LSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRL 430
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
+ VTY L+ GYCK + A ++ N M GV PNV Y L LC K D + A
Sbjct: 431 DVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLC-KQGDVQAAN 489
Query: 500 KLLEDMRLKGLHLNGIT 516
+LL +M KGL LN T
Sbjct: 490 ELLHEMSNKGLELNACT 506
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 147/337 (43%), Gaps = 12/337 (3%)
Query: 156 VTSGVVDALLKAICSSVGKKE--VYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKG 213
VT G+ L+ C+ +G+ E V L D+V E V T ++AL G+
Sbjct: 295 VTYGI---LIHGYCA-LGELENAVKLLDDMVARGVEPNATVYT-----SVVALLCDKGRV 345
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
A V + + ++ Y + + A ++M G D +
Sbjct: 346 SDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTL 405
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEA 333
I+ C+ G+ KEA V +++ + L+ C+ + + A + +
Sbjct: 406 INGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAE-AFQVHNTMVQRG 464
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
+ ++++ LC+ DV A LL +M ++G +NS+I+ KAG + AM
Sbjct: 465 VAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAM 524
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
+ M + GLKPDVYTYT L+ G+++ A ++L E N + + VTY+ L+ G+
Sbjct: 525 RTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGF 584
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
C + KLL M + + PN YN L++ C+
Sbjct: 585 CMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCI 621
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 179/398 (44%), Gaps = 7/398 (1%)
Query: 125 SFELDLHEDFVLKVLETPLVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIV 184
++ + +H L LE + L +++V + V +++ +C K V +V
Sbjct: 296 TYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCD---KGRVSDALTVV 352
Query: 185 KEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSR 244
+++ K +L + +++ F G +A F++ G + TY I L R
Sbjct: 353 EDMVH-HKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCR 411
Query: 245 RKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSV 304
A V ++M+ D ++ +CK GK EA V+ ++ + P
Sbjct: 412 AGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVT 471
Query: 305 VAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM 364
L LC++ + V+ A ++L + S + + ++S+I LC+ + A ++ M
Sbjct: 472 YTALSDGLCKQGD-VQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADM 530
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
+ G P + ++I A K+G++ A ++L+ M G+KP + TY LM+G+ G++
Sbjct: 531 DAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRV 590
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
E ++L + + + TY++L++ YC ++ M V+PN + YN L
Sbjct: 591 EGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNIL 650
Query: 485 IQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIR 521
I+ C KA + A+ +M KG L + ALIR
Sbjct: 651 IKGHC-KARSMKEAQYFHNEMIEKGFRLTASSYSALIR 687
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 120/283 (42%), Gaps = 1/283 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
L+ + K GK AF+V N G N TY + L ++ A + +M G
Sbjct: 440 LVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKG 499
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
++ +I+ CK G +A + P LI +LC+ E + A
Sbjct: 500 LELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGE-LDRA 558
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
D+L + K I ++ ++ C V G K LL M+ + P +NS++
Sbjct: 559 HDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQ 618
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y +M E+ K M SR ++P+ TY L+ G+ M+EA NE + RL+
Sbjct: 619 YCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLT 678
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
+Y LIR K ++F A KL ++M+ G D YN I
Sbjct: 679 ASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYI 721
>gi|115482764|ref|NP_001064975.1| Os10g0499500 [Oryza sativa Japonica Group]
gi|22165074|gb|AAM93691.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31432889|gb|AAP54465.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639584|dbj|BAF26889.1| Os10g0499500 [Oryza sativa Japonica Group]
gi|125575293|gb|EAZ16577.1| hypothetical protein OsJ_32049 [Oryza sativa Japonica Group]
gi|215694503|dbj|BAG89496.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215697419|dbj|BAG91413.1| unnamed protein product [Oryza sativa Japonica Group]
gi|295901486|dbj|BAJ07249.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
Group]
gi|295901490|dbj|BAJ07251.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
Group]
Length = 506
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 127/279 (45%), Gaps = 3/279 (1%)
Query: 212 KGKAAFEVFNKFGD--YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEK 269
+ + A E+ + D GC+ N +Y I+ L + D A++ +M++ LP+
Sbjct: 176 RSQEALELLHMMADDGGGCLPNVVSYSTVIDGLLKGGDPDKAYATYREMLDRRILPNVVI 235
Query: 270 VGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDF 329
II+ CKG +A V+ + + P L+ C + + A+ L+
Sbjct: 236 YSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTE-AIKFLEKM 294
Query: 330 SGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
+ + +SS + LC+ A+ + M+ G P ++S++ Y+ G +
Sbjct: 295 CSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGLKPDITTYSSLLHGYAIEGAL 354
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
+ LM ++PD Y + L+ A G+++EA + ++ ++ + + VTY TL
Sbjct: 355 VEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRQQGLKPNCVTYSTL 414
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
I GYCK+ + AL L EM GV PN YN ++Q L
Sbjct: 415 INGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGL 453
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 118/286 (41%), Gaps = 17/286 (5%)
Query: 158 SGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAF 217
S V+D LLK + YA + +E+ ++ + + V I + +IA K A
Sbjct: 202 STVIDGLLKG----GDPDKAYATY---REMLDR-RILPNVVIYSSIIAALCKGQAMDKAM 253
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
EV ++ G N TY + A EKM G P+ + +
Sbjct: 254 EVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYL 313
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA--LDMLDDFSGEARK 335
CK G+ EA ++ ++ + P + + L+ E V++ D++ +
Sbjct: 314 CKNGRCTEARKIFDSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDH 373
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
Y F+++I + + V A + SKM +G P ++++I+ Y K M A+ +
Sbjct: 374 YV---FNTLIYASAKQGKVDEAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALAL 430
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA----CEILNEAKKN 437
+ M S G+ P+ TY ++ G G+ A +I+ KK+
Sbjct: 431 FQEMVSNGVSPNFITYNIMLQGLFRTGRTATAKEFYVQIIKSGKKD 476
>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
Length = 637
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 151/344 (43%), Gaps = 12/344 (3%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N ++ K + + A+E+F++ G V + TY I A + A + ++M+
Sbjct: 147 NAVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVA 206
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
P+ +I C+ G +A ++ +E M P Q L+S CQ D+ V
Sbjct: 207 RQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDD-VN 265
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A + + F+++I C+ K AK + M G P V+NS++
Sbjct: 266 SAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLM 325
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
++GD A+ + + M GL PD +T + ++ G +GGQ++ A L +++
Sbjct: 326 DGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVN 385
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
L+ Y+ LI YC+ + AL M +VGV+PNV Y+ LI K + A
Sbjct: 386 LNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHS-KLGKMQIAMA 444
Query: 501 LLEDMRLKGLHLNGIT-RALIR---------AVKELEEDAIENG 534
+ +M KG+ N +T ALI A ++ IENG
Sbjct: 445 IYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENG 488
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 146/358 (40%), Gaps = 23/358 (6%)
Query: 180 LWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI 239
L+D +KE G + N L++ + +AF ++ + + G + N + I
Sbjct: 235 LFDAMKEAGMRPNQY----TYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLI 290
Query: 240 EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
+ + K F A + M G P ++ + G A+EA +Y +
Sbjct: 291 DGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLC 350
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P + + ++ LC + +++A L+ + ++++I CR ++ A
Sbjct: 351 PDEFTCSIVVRGLCDGGQ-IQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALA 409
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
++M G P ++S+I +SK G M AM + M ++G++P+V TYT L+ G+A
Sbjct: 410 TCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHA 469
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV------- 472
G ++ A E +N + +T L+ G C+ A++ + E +
Sbjct: 470 KNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRFVMEHSGIKYSDIHS 529
Query: 473 ----------GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
+ PN Y LI L L + A KL MR G+ + T L+
Sbjct: 530 FFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYE-AGKLFSYMRKSGMISDSFTYTLL 586
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 139/316 (43%), Gaps = 17/316 (5%)
Query: 180 LWD--IVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYF 237
+WD + ++I + V+T +I + + G A +F+ + G NQ TY
Sbjct: 200 MWDQMVARQI---DPNVIT---YTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNV 253
Query: 238 TIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKK 297
+ + + A+ + ++++ +G +P++ +I FCK + EA ++
Sbjct: 254 LMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFG 313
Query: 298 MYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKD 353
+ P V L+ + + + AL + + + + + P S V+R LC
Sbjct: 314 VAPTVPVYNSLMDGAFRSGDAQE-ALSLYQEMT----RLGLCPDEFTCSIVVRGLCDGGQ 368
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
+ A L + +G A +N++I Y + G++ A+ M G++P+V +Y+
Sbjct: 369 IQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSS 428
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
L+ G++ G+M+ A I E + VTY LI G+ K D A + EM + G
Sbjct: 429 LIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENG 488
Query: 474 VQPNVDEYNKLIQSLC 489
+ PN + L+ LC
Sbjct: 489 ISPNAITVSVLVDGLC 504
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 85/174 (48%), Gaps = 1/174 (0%)
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
A+ ++V+ L + + A L +M+ G P +N++I+A G + A EM
Sbjct: 142 ALPACNAVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMW 201
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
M +R + P+V TYT ++ G + +A + + K+ R + TY+ L+ G+C+
Sbjct: 202 DQMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQG 261
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
++ + A L E+ + G+ PN + LI C KA + A+ + DM G+
Sbjct: 262 DDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFC-KAKRFSEAKDMFRDMPRFGV 314
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/330 (19%), Positives = 116/330 (35%), Gaps = 53/330 (16%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+ LI F K + A ++F +G Y ++ R A S+ ++M
Sbjct: 285 VFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEM 344
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
G PD ++ C GG+ + A RE + + LI C+ +
Sbjct: 345 TRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCR-NGN 403
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
++ AL + + + +SS+I ++ + A + ++M+++G P + +
Sbjct: 404 LEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTA 463
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT---------------------------- 410
+I ++K G + A K M G+ P+ T
Sbjct: 464 LIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRFVMEHSGIK 523
Query: 411 ------------------------YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
Y L+ G GQ EA ++ + +K+ TY
Sbjct: 524 YSDIHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAGKLFSYMRKSGMISDSFTY 583
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
LIRG C L A+ L +M +GV+P
Sbjct: 584 TLLIRGQCMLGYVLNAMMLYADMMKIGVKP 613
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 7/149 (4%)
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P N+V+ KA A E+ M RG+ P V TY L++ G + +A E+
Sbjct: 141 PALPACNAVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEM 200
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC---ALKLLNEMKDVGVQPNVDEYNKLIQS 487
++ + +TY ++I C L E C A +L + MK+ G++PN YN L+
Sbjct: 201 WDQMVARQIDPNVITYTSMI---CVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSG 257
Query: 488 LCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
C + D +A L +++ GL N +
Sbjct: 258 HC-QGDDVNSAFVLYQELLNSGLIPNAVV 285
>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
Length = 800
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 183/434 (42%), Gaps = 51/434 (11%)
Query: 145 LGENLVCFFK-WVTSGVVDA-----LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVE 198
L ++ V FK SG+ DA L+ +C +E LW+ + E G K V
Sbjct: 367 LWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHS 426
Query: 199 IL---------NELIALFSKL-GKG-----------------KAAFE----VFNKFGDYG 227
+L +E + L++++ GKG KAAF+ + + G
Sbjct: 427 LLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNG 486
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCE-----KMIET-GSLPDSEKVGKIISWFCKGG 281
N TY I L VCE K ET G +P + II+ F K G
Sbjct: 487 VSCNDYTYNTLINGLC------VVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAG 540
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
A VY K + P I C+ LAL ML+D + + I +
Sbjct: 541 MMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKT-SCCDLALKMLNDVRCKGLRPDIAAY 599
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+S+I C+ ++ A +L M+ +G P +V+NS I+ Y M A+ + M
Sbjct: 600 NSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIK 659
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+ D TYT L+ G++ G + A ++ +E + +T+ L G C+ + D
Sbjct: 660 EGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDD 719
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIR 521
A KLL+EM + ++PNV YN LI L+ + A +L ++M + + + T ++
Sbjct: 720 ARKLLDEMNRLDIRPNVLMYNMLINGY-LRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778
Query: 522 AVKELEEDAIENGE 535
+K L D+ + E
Sbjct: 779 GMKSLGSDSPIDAE 792
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 151/378 (39%), Gaps = 53/378 (14%)
Query: 152 FFKW--VTSGVVDALLKAICSSVGK-KEVYALWDIVKEIGEKEKGVLTVEILNELIALFS 208
F W + VVD L+K G+ +E + D + G+K VL +++ +
Sbjct: 243 FVPWDFTFNSVVDVLVKG-----GRMEEALHIKDELLATGKKMSVVLATTLMHG----YC 293
Query: 209 KLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSE 268
+ + A ++F + G V TY I + + + A+ +C +M + G LP +
Sbjct: 294 LQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTN 353
Query: 269 KVGKI----------------------------------ISWFCKGGKAKEAHVVYTLAR 294
+ + I W C+ K +EA ++
Sbjct: 354 EFNMVIKGLLNDKLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMN 413
Query: 295 EKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRM 351
E + P L+ C DE VKL +M G+ + ++++++
Sbjct: 414 ETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEM----PGKGFTPNVVTYTTLMKGHINK 469
Query: 352 KDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTY 411
A LL++M G + +N++I+ G + EMLK + G P TY
Sbjct: 470 AAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTY 529
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
+++G+ G M A + + + VTY + I GYCK D ALK+LN+++
Sbjct: 530 NSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRC 589
Query: 472 VGVQPNVDEYNKLIQSLC 489
G++P++ YN LI C
Sbjct: 590 KGLRPDIAAYNSLIYGFC 607
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 87/169 (51%), Gaps = 1/169 (0%)
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
S I SLC+++D + A +L KM G P + FNSV+ K G M A+ + + +
Sbjct: 216 SVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLA 275
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G K V T LM GY ++ +A +I E ++ + VTY LIRG + +
Sbjct: 276 TGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEK 335
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
A +L +M+D G+ P+ +E+N +I+ L L W+ A L ++M G+
Sbjct: 336 AYELCRQMRDHGLLPSTNEFNMVIKGLLNDKL-WKDAVSLFKEMADSGI 383
>gi|15983487|gb|AAL11611.1|AF424618_1 AT5g04810/MUK11_13 [Arabidopsis thaliana]
Length = 950
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 149/348 (42%), Gaps = 14/348 (4%)
Query: 178 YALWDIVKEIGEKEKGVLTVEILNE------------LIALFSKLGKGKAAFEVFNKFGD 225
+ + D + +++KG++ + L E LI L++K+GK A EV +
Sbjct: 451 HTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKE 510
Query: 226 YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKE 285
G N +TY I + K + A++V E M++ G PD IIS FC G
Sbjct: 511 EGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDR 570
Query: 286 AHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVI 345
A ++ + P +I + + ++ +L++ D + F+ +I
Sbjct: 571 AIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD-MRRSLEVFDMMRRCGCVPTVHTFNGLI 629
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
L + + A +L +M G + ++ Y+ GD A E +++ GL
Sbjct: 630 NGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLD 689
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
D++TY L+ G+M+ A + E + + Y+ LI G+ + + A L
Sbjct: 690 VDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADL 749
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
+ +MK GV+P++ Y I S C KA D A + +E+M G+ N
Sbjct: 750 IQQMKKEGVKPDIHTYTSFI-SACSKAGDMNRATQTIEEMEALGVKPN 796
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 134/346 (38%), Gaps = 37/346 (10%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
++ + + G A E F + G Y I A + + D A S KM E G
Sbjct: 313 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 372
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
I+ F K G A+ A + A+ S+ +I + CQ ++ A
Sbjct: 373 IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTC-NMERA 431
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++ + E I + +++ + D + ++ G P + +I+
Sbjct: 432 EALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINL 491
Query: 383 YSKAGDMTPAMEMLKLMR-----------------------------------SRGLKPD 407
Y+K G ++ A+E+ ++M+ G+KPD
Sbjct: 492 YTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPD 551
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
V Y ++S + G M+ A + + E +K R + T+ +I GY K + +L++ +
Sbjct: 552 VILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFD 611
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
M+ G P V +N LI L K A ++L++M L G+ N
Sbjct: 612 MMRRCGCVPTVHTFNGLINGLVEKR-QMEKAVEILDEMTLAGVSAN 656
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 93/194 (47%), Gaps = 11/194 (5%)
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSV-----------IRSLCRMKDVHGAK 358
SS QE E + +L + D +G+ + I F + ++ R D+H A+
Sbjct: 268 SSWHQEREGSRKSLQRILDTNGDNWQAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRAR 327
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+M + G P + ++ S+I AY+ DM A+ ++ M+ G++ + TY+ ++ G+
Sbjct: 328 ETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGF 387
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
+ G E A +EAK+ H L+ Y +I +C+ + A L+ EM++ G+ +
Sbjct: 388 SKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPI 447
Query: 479 DEYNKLIQSLCLKA 492
Y+ ++ + A
Sbjct: 448 AIYHTMMDGYTMVA 461
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 108/279 (38%), Gaps = 37/279 (13%)
Query: 184 VKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALS 243
VKE+ +K + T +I ++K G + + EVF+ GCV T+ I L
Sbjct: 575 VKEM-QKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLV 633
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS 303
++ + A + ++M G + KI+ + G +A +T + + +
Sbjct: 634 EKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIF 693
Query: 304 VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSK 363
L+ + C+ ++ AL + + S ++ +I R DV A L+ +
Sbjct: 694 TYEALLKACCKSGR-MQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQ 752
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPA------MEMLKL------------------- 398
M EG P + S ISA SKAGDM A ME L +
Sbjct: 753 MKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASL 812
Query: 399 ----------MRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
M++ G+KPD Y L++ + + EA
Sbjct: 813 PEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEA 851
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 151/329 (45%), Gaps = 13/329 (3%)
Query: 165 LKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFG 224
+K +CSS ++ ++IVKE+G V I LI F + + A V +
Sbjct: 427 VKGMCSS---GDLDGAYNIVKEMG-ASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMR 482
Query: 225 DYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAK 284
+ G + Y I LS+ K D A S +M+E G PD+ G IS + + G+
Sbjct: 483 EQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFA 542
Query: 285 EAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA---LDMLDD-FSGEARKYAIKP 340
A E + P + + LI+ C++ + ++ M++ G+A+ Y +
Sbjct: 543 SADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTV-- 600
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++ L + V+ A+ + +M +G P + ++I +SK G+M A + M
Sbjct: 601 ---LMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMV 657
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
GL +V Y L+ G+ G++E+A E+L+E + VTY T+I GYCK +
Sbjct: 658 QAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLA 717
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A +L +EMK G+ P+ Y L+ C
Sbjct: 718 EAFQLFDEMKLKGLVPDSFVYTTLVDGCC 746
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 158/380 (41%), Gaps = 43/380 (11%)
Query: 154 KWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKG 213
KW + V ++++ + VGK + L + G EKG L+E + +FS
Sbjct: 127 KWPVAEVWSSIVRCLREFVGKSDDRVLLFGILIDGYIEKG-----FLDEAVFVFSS---- 177
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
K D V + ++AL +R D W V + M+E + D + +
Sbjct: 178 -------TKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKGMVERNVVFDVQSYEML 230
Query: 274 ISWFCKGGKAKEAHVVYTLARE---------------------KKMYPPQSVVAFLISSL 312
I C+ G + A V E K + P + LI L
Sbjct: 231 IGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSCKGLVPSRQSYNLLIDGL 290
Query: 313 CQED--ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
C++ E K L ++ A A +S +I L + ++ A L+ +M+S G
Sbjct: 291 CKQKRLEDAKSLLVEMNSVGLFADNVA---YSILIDGLLKGRNADAANGLVHEMVSHGFS 347
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
+++ I SK G M A + M + G+ P Y L+ G+ + + E+
Sbjct: 348 IDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYEL 407
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
L E KK + +SP TY T ++G C + D A ++ EM G +PNV Y LI++
Sbjct: 408 LVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQ 467
Query: 491 KALDWRTAEKLLEDMRLKGL 510
K+ + A ++L++MR +G+
Sbjct: 468 KS-RFGDAVRVLKEMREQGI 486
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 130/301 (43%), Gaps = 13/301 (4%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G A+ Y I+ L + + D A + +M+ G D I K G ++A
Sbjct: 310 GLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKA 369
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS--SV 344
++ + P A LI +E + V+ ++L + + R I P++ +
Sbjct: 370 KALFDGMITFGVTPGARAYASLIEGFFRE-KNVRKGYELLVEI--KKRNIVISPYTYGTA 426
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
++ +C D+ GA ++ +M + G P ++ ++I + + A+ +LK MR +G+
Sbjct: 427 VKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGI 486
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
PD + Y L+ G + +M+EA L E +N + TY I GY + EF A K
Sbjct: 487 APDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADK 546
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLCLK--------ALDWRTAEKLLEDMRLKGLHLNGIT 516
+ EM + GV PN LI C K A + +L D + + +NG+
Sbjct: 547 YVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLV 606
Query: 517 R 517
+
Sbjct: 607 K 607
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 136/318 (42%), Gaps = 17/318 (5%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI FSKLG + A +F++ G +N Y + R + A + ++M G
Sbjct: 636 LIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKG 695
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P++ II +CK G EA ++ + K + P V L+ C+ ++ +
Sbjct: 696 FPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAI 755
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS----EGPPPGNAVFNS 378
+ G A A PF+++I + + ++++++ + P + +N
Sbjct: 756 TIFETNEKGCASSSA--PFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNI 813
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I K G++ A E+ M+ L P V TYT L++GY G+ E + +E
Sbjct: 814 MIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAG 873
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL----- 493
+ Y +I + K AL LL++M + VD+ KL S C L
Sbjct: 874 IEPDNIMYSVIINAFLKEGMTTKALVLLDQMF---AKNAVDDGCKLSISTCRALLSGFAK 930
Query: 494 --DWRTAEKLLEDM-RLK 508
+ AEK++E+M RLK
Sbjct: 931 VGEMEVAEKVVENMVRLK 948
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 147/322 (45%), Gaps = 4/322 (1%)
Query: 190 KEKGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
KEKG++ V + LI+ F K G+ + AFE+ ++ G N Y ++ L +
Sbjct: 640 KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDI 699
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
A + + M E G PDS +I +CK EA ++ K + P V L
Sbjct: 700 QRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL 759
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
+ C+E + K A+++ + + + F+++I C+ + A L +MI++
Sbjct: 760 VHGCCKEGDMEK-AMNLFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQ 817
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P + + +VI + KAG M A + K M+ R L D TYT LM GY GQ E
Sbjct: 818 IMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVF 877
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ + + VTY +I +CK + A KL +E+ G+ ++ LI +L
Sbjct: 878 ALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITAL 937
Query: 489 CLKALDWRTAEKLLEDMRLKGL 510
C K D A KLL++M GL
Sbjct: 938 C-KREDLTEASKLLDEMGELGL 958
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 149/351 (42%), Gaps = 37/351 (10%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI K GK + A E+ GC N T+ IE R A + ++M +
Sbjct: 372 NVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEK 431
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
+P + G +I+ C A+ + + P V + LI + E ++
Sbjct: 432 RNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGR-IE 490
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLL------------------- 361
A +LD S I ++++I L + + A T L
Sbjct: 491 EARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFI 550
Query: 362 ----------------SKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
+M+ G P N ++ +I+ + KAG++ A+ + + + + G+
Sbjct: 551 LGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVL 610
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
PDV T + + G G+++EA ++ +E K+ TY +LI G+CK E + A +L
Sbjct: 611 PDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFEL 670
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+EM G+ PN+ YN L+ LC K+ D + A KL + M KGL + +T
Sbjct: 671 HDEMCLKGIAPNIFIYNALVDGLC-KSGDIQRARKLFDGMPEKGLEPDSVT 720
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 108/424 (25%), Positives = 170/424 (40%), Gaps = 63/424 (14%)
Query: 117 GYLESSLDSFELDLHEDFVLKVLETPLVLGENLVC----FFKWVTSGVVDA--------- 163
G L+ + + F + ++ ++ ++ +L + L C F V +G++DA
Sbjct: 172 GMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTY 231
Query: 164 --LLKAICSS---VGKKEVYALWDIVKEIGEKEKGVLTVEILNEL-IALFSKLGKGKAAF 217
L+ A+C + G K V D EKG+ E + L I ++G A
Sbjct: 232 TYLVGALCKTGDLRGAKRVLIEMD--------EKGLNPNEFIYSLVIEGMCQVGDIDEAV 283
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
E+ G+ G V N TY L R K + A E+M +TG PD +I F
Sbjct: 284 ELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGF 343
Query: 278 CKGGKAKEAH--------------------VVYTLAREKKM---------------YPPQ 302
+ G E +++ L + KM P
Sbjct: 344 MREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNS 403
Query: 303 SVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLS 362
LI C+E + AL++LD+ + + ++I LC KD+ A LL
Sbjct: 404 RTFCLLIEGYCREHNMGR-ALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLE 462
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG 422
KM G P V++ +I AY+ G + A +L M G+ PD++ Y ++S + G
Sbjct: 463 KMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAG 522
Query: 423 QMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
+MEEA L E + + VT+ I GY K + A K +EM D G+ PN Y
Sbjct: 523 KMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYT 582
Query: 483 KLIQ 486
LI
Sbjct: 583 VLIN 586
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 135/315 (42%), Gaps = 2/315 (0%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
V + + LI ++ G+ + A + + G + Y I LS+ + A +
Sbjct: 472 NVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYL 531
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
++ G PD+ G I + K GK EA + + + P + LI+ +
Sbjct: 532 LEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKA 591
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
++ AL + ++ S+ I L + V A + S++ +G P
Sbjct: 592 GNLME-ALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFT 650
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
++S+IS + K G++ A E+ M +G+ P+++ Y L+ G G ++ A ++ +
Sbjct: 651 YSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMP 710
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+ VTY T+I GYCK E A L +EM GVQP+ YN L+ C K D
Sbjct: 711 EKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHG-CCKEGDM 769
Query: 496 RTAEKLLEDMRLKGL 510
A L +M KG
Sbjct: 770 EKAMNLFREMLQKGF 784
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 1/185 (0%)
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+ + ++ ++ +LC+ D+ GAK +L +M +G P +++ VI + GD+ A+E+
Sbjct: 226 FDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVEL 285
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
+ M +GL P+ YTYT + +G +M EA E +K + LI G+ +
Sbjct: 286 KRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMR 345
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
+ D L++ + M G+ N+ YN LI LC K A ++L+ M G N
Sbjct: 346 EGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLC-KFGKMEKAAEILKGMVTLGCKPNSR 404
Query: 516 TRALI 520
T L+
Sbjct: 405 TFCLL 409
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 124/306 (40%), Gaps = 41/306 (13%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
++ C S E ++L+ + G + + N L+ K G + A +F +
Sbjct: 723 TMIDGYCKSENVAEAFSLFHEMPSKGVQPHSF----VYNALVHGCCKEGDMEKAMNLFRE 778
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G A ++ I+ + A + ++MI +PD +I W CK GK
Sbjct: 779 MLQKG-FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGK 837
Query: 283 AKEAHVVYTLAREKK-----------MY------------------------PPQSVVAF 307
+EA++++ +E+ MY P +
Sbjct: 838 MEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGL 897
Query: 308 LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
+I + C+ED V+ A + D+ G+ +I +LC+ +D+ A LL +M
Sbjct: 898 VIYAHCKEDNLVE-AFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGEL 956
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P A N+++ ++ +AG M A + + ++S GL PD T L++G N E+A
Sbjct: 957 GLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDA 1016
Query: 428 CEILNE 433
++ +
Sbjct: 1017 RNLIKQ 1022
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
NS++ K G M ++ M + DVYTYT L+ G + A +L E +
Sbjct: 197 NSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDE 256
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ Y +I G C++ + D A++L M + G+ PN Y + LC +A
Sbjct: 257 KGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLC-RAKRMN 315
Query: 497 TAEKLLEDMRLKGL 510
A+ E+M+ GL
Sbjct: 316 EAKLTFEEMQKTGL 329
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 1/149 (0%)
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
VF+ +I +Y + G + A + + ++ + + L+ G ME ++ N
Sbjct: 159 VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNG 218
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
TY L+ CK + A ++L EM + G+ PN Y+ +I+ +C +
Sbjct: 219 MLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMC-QVG 277
Query: 494 DWRTAEKLLEDMRLKGLHLNGITRALIRA 522
D A +L M KGL N T +I A
Sbjct: 278 DIDEAVELKRSMGEKGLVPNTYTYTIITA 306
>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Vitis
vinifera]
Length = 829
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 144/314 (45%), Gaps = 2/314 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI ++G + +F++ K G + TY + +L + D A + +M G
Sbjct: 381 LICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIG 440
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD +I CK G +EA +Y K++YP V + +IS L E + A
Sbjct: 441 LKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLF-EKGAISEA 499
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
D + I ++ +I ++ ++ A ++I +G P FNS+I
Sbjct: 500 QMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYG 559
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ K G + A+++L ++ GL P TYT LM+GY G M ++L+E + + +
Sbjct: 560 FCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPT 619
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
+TY +++G CK +++LL M G+ P+ YN +IQS C KA D + A +L
Sbjct: 620 QITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFC-KAHDLQKAFQLH 678
Query: 503 EDMRLKGLHLNGIT 516
M L + +T
Sbjct: 679 NQMLQHSLQPSPVT 692
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 115/238 (48%), Gaps = 1/238 (0%)
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+++IE G P +I FCK GK EA + + + P L++ C+E
Sbjct: 539 KQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEE 598
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ + DML + +A K ++ V++ LC+ +H + LL M + G P
Sbjct: 599 GDMHSM-FDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQIT 657
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N+VI ++ KA D+ A ++ M L+P TY L++G G +++A +L +
Sbjct: 658 YNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQ 717
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
RL+ V Y T+I+ +C + AL ++M + G + ++ +Y+ +I LC + L
Sbjct: 718 DQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNL 775
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 149/344 (43%), Gaps = 38/344 (11%)
Query: 195 LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSV 254
L++ L++ K G+ A + ++ G + TY I L +R + A +
Sbjct: 408 LSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIEL 467
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
E+M P+S IIS + G EA +MY S+ +
Sbjct: 468 YEEMCSKRIYPNSFVCSAIISGLFEKGAISEA----------QMY---------FDSVTK 508
Query: 315 ED--ETVKLALDMLDDFS-----GEA-RKY----------AIKPFSSVIRSLCRMKDVHG 356
D E + L M+D ++ GEA R Y I F+S+I C+ +
Sbjct: 509 SDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAE 568
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A LL + G P + + ++++ Y + GDM +ML M ++ +KP TYT ++
Sbjct: 569 AVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVK 628
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
G G++ E+ ++L +TY+T+I+ +CK + A +L N+M +QP
Sbjct: 629 GLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQP 688
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
+ YN LI LC+ + + A++LL ++ + + L + I
Sbjct: 689 SPVTYNVLINGLCVYG-NLKDADRLLVTLQDQSIRLTKVAYTTI 731
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 147/345 (42%), Gaps = 45/345 (13%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G + A E N ++G + TY + AW V ++M+ G PD
Sbjct: 319 GSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTY 378
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYP--PQSVVAF--LISSLCQEDETVKLALDML 326
+I C+ G +E+ + +EK + S+V + L+SSLC+ + A+ +L
Sbjct: 379 TILICGHCQMGNIEESFKL----KEKMLSQGLKLSIVTYTVLLSSLCKSGR-IDEAVILL 433
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV----------- 375
+ K + +S +I LC+ V A L +M S+ P + V
Sbjct: 434 HEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEK 493
Query: 376 ------------------------FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTY 411
+N +I Y+K G++ A+ K + +G+ P + T+
Sbjct: 494 GAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTF 553
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
L+ G+ G++ EA ++L+ K + + VTY TL+ GYC+ + +L+EM+
Sbjct: 554 NSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEA 613
Query: 472 VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++P Y +++ LC K + +LL+ M +GL + IT
Sbjct: 614 KAIKPTQITYTVVVKGLC-KEGRLHESVQLLKYMYARGLFPDQIT 657
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 139/287 (48%), Gaps = 21/287 (7%)
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKI-ISWFCKGGKAKEAHVVYTLAREK--KMYPPQSVV 305
D W V + I+ +P +E I I C+ + ++A T RE + + P SVV
Sbjct: 217 DIMWDVYNE-IKASGVPQNEYTNPILIDGLCRQSRLQDA---VTFLRETGGEEFGP-SVV 271
Query: 306 AF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKT 359
+F L+S C+ ++D+ F KY + P ++ ++ LC + A
Sbjct: 272 SFNALMSGFCKMG-----SVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALE 326
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
+ M + G P +N + + + G ++ A ++++ M GL PD+ TYT L+ G+
Sbjct: 327 FTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHC 386
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
G +EE+ ++ + +LS VTY L+ CK D A+ LL+EM+ +G++P++
Sbjct: 387 QMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLL 446
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG-ITRALIRAVKE 525
Y+ LI LC + A +L E+M K ++ N + A+I + E
Sbjct: 447 TYSVLIHGLCKRG-AVEEAIELYEEMCSKRIYPNSFVCSAIISGLFE 492
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 145/343 (42%), Gaps = 20/343 (5%)
Query: 205 ALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL 264
+L L ++V+N+ G N+ T I+ L R+ A + ETG
Sbjct: 208 SLLYNLRHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLR---ETGGE 264
Query: 265 ---PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
P ++S FCK G A + + + + P L+ LC +++
Sbjct: 265 EFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAG-SMEE 323
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
AL+ +D + I ++ + + + GA ++ +M+ G P + +I
Sbjct: 324 ALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILIC 383
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
+ + G++ + ++ + M S+GLK + TYT L+S G+++EA +L+E + +
Sbjct: 384 GHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKP 443
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA--------L 493
+TY LI G CK + A++L EM + PN + +I L K
Sbjct: 444 DLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYF 503
Query: 494 DWRTAEKLLEDMRLKGLHLNGITRA-----LIRAVKELEEDAI 531
D T + E++ L + ++G + +R+ K++ E I
Sbjct: 504 DSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGI 546
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/279 (18%), Positives = 103/279 (36%), Gaps = 38/279 (13%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
++L+ C E L D +K G V ++N + + G + F++ +
Sbjct: 554 NSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNG----YCEEGDMHSMFDMLH 609
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ Q TY ++ L + + + + M G PD +I FCK
Sbjct: 610 EMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAH 669
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ--------------EDETVKL------ 321
++A ++ + + P LI+ LC +D++++L
Sbjct: 670 DLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYT 729
Query: 322 --------------ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
AL + +I+ +S+VI LC+ + AK M++
Sbjct: 730 TIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTH 789
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
G PP + +++A+ ++GD E+ +M GL P
Sbjct: 790 GIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 71/180 (39%), Gaps = 33/180 (18%)
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM----------------- 415
N V++ + AYS+A + A+ +L M+ L+ + TY L+
Sbjct: 168 NVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYNEIK 227
Query: 416 ---------------SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G ++++A L E S V+++ L+ G+CK+ D
Sbjct: 228 ASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVD 287
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
A M G+ P+V YN L+ LC+ A A + DM G+ + +T ++
Sbjct: 288 VAKSFFCMMIKYGLLPDVYSYNILLHGLCV-AGSMEEALEFTNDMENHGVEPDIVTYNIL 346
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 164/390 (42%), Gaps = 47/390 (12%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+ C S ++ + ++ E K V V + L+ K G A ++F +
Sbjct: 189 ALIDGFCKSGNLEKAMKMLGVM----EGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRR 244
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
GCV N TY I L D A + ++M T PD+ ++ +C+ G+
Sbjct: 245 MTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGR 304
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED--ETVKLALDMLDDFSG--------- 331
+EA ++ K P + L+ C E + L+ + +G
Sbjct: 305 IEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYS 364
Query: 332 -------EARKYA-------------IKP----FSSVIRSLCRMKDVHGAKTLLSKMISE 367
A+++ + P +SS+I LC+ V A +L M+++
Sbjct: 365 IVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNK 424
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
P FNSVI A + GDM A ++L M + GL+P + TYT L+ G++ G+ME A
Sbjct: 425 RVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIA 484
Query: 428 CEILNEAK------KNHSRLSP-VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
E+ + + + L P + LIRG CK E D A+ ++ E++ +P ++
Sbjct: 485 YELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEED 544
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
++ L L+A A KL+ + GL
Sbjct: 545 CLAIVDGL-LRAGRTEEAGKLINSISKVGL 573
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 129/247 (52%), Gaps = 6/247 (2%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDF-SG 331
II FCK + K+A + RE + P + +++ LC+ T K A ++L + G
Sbjct: 13 IIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSK-AYEVLKEMRDG 70
Query: 332 EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS-EGPPPGNAVFNSVISAYSKAGDMT 390
++ + +S+VI C+ ++ A +L +M++ +G P + SV+ + G M
Sbjct: 71 KSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMD 130
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS-RLSPVTYHTL 449
A EM++ M+ +G++PD +T++ L++G+ N +++EA ++ E + S + VTY L
Sbjct: 131 RACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTAL 190
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
I G+CK + A+K+L M+ PNV Y+ L+ LC KA D A L M KG
Sbjct: 191 IDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLC-KAGDLDQALDLFRRMTSKG 249
Query: 510 LHLNGIT 516
N +T
Sbjct: 250 CVPNVVT 256
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 153/360 (42%), Gaps = 12/360 (3%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
VV+ L KA +S ++++KE+ + + + + +I F K G+ A E+
Sbjct: 47 VVNGLCKARLTSKA-------YEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEI 99
Query: 220 FNKFGDY-GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+ G + TY ++ L R D A + +M G PD +I+ +C
Sbjct: 100 LREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWC 159
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVV-AFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
K EA +Y + P V LI C+ K A+ ML G
Sbjct: 160 NARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEK-AMKMLGVMEGRKCVPN 218
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+ +SS++ LC+ D+ A L +M S+G P + ++I A + A ++
Sbjct: 219 VVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMD 278
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M + PD +Y L+ GY G++EEA ++ E +TY L+RG+C
Sbjct: 279 EMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNAS 338
Query: 458 EFDCALKLLNEMKD-VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ A LL MK G+ P+V Y+ ++ +A + A + +++M + + N +T
Sbjct: 339 RLEEARFLLENMKTAAGIDPDVVTYSIVVAGYS-RAKRFVEAAEFIQEMIARNVAPNAVT 397
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCA 462
+P V T+T ++ G+ Q+++A L +K ++P TY+ ++ G CK A
Sbjct: 4 QPTVVTWTIIIDGFCKANQLKQA---LACFEKMREFVAPNERTYNVVVNGLCKARLTSKA 60
Query: 463 LKLLNEMKD-VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++L EM+D V P++ Y+ +I C + R E L E + G+ + +T
Sbjct: 61 YEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVT 115
>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
Length = 793
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 162/348 (46%), Gaps = 23/348 (6%)
Query: 167 AICSSVGKKEVYALWDIVKEI--GEKEKGV-LTVEILNELIALFSKLGKGKAAFEVFNKF 223
A+C G + D V + G K GV L+ + N LI+ + + G AF+++++
Sbjct: 434 AVCGKRGME------DYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEM 487
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
G TY + LSR+ + A S+ KM++ G P+ + ++ + KGG A
Sbjct: 488 ISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNA 547
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISS--LCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ ++P ++ L+ + C+ E V+ A E + KP
Sbjct: 548 AGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQ-------EVKAQGYKPD 600
Query: 342 SSVIRSLCRMKDVHG----AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+ S+ M +G A + + G P +NS++ Y+K+ + A ++LK
Sbjct: 601 LVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILK 660
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
++S +KPDV +Y +++G+ G ++EA IL+E + VTYHTL+ GY LE
Sbjct: 661 QLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLE 720
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
F+ A +++N M ++P Y +++ S C KA + A + L ++
Sbjct: 721 MFNEAREVVNYMIHHNLKPMELTYRRVVDSYC-KAKRYDEAREFLSEI 767
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 121/279 (43%), Gaps = 1/279 (0%)
Query: 235 YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR 294
Y + ALSR ++ A + ++ G +P ++ + + G++ V
Sbjct: 183 YTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEM 242
Query: 295 EKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDV 354
P A + + C D + A+ +D + ++++++ + +
Sbjct: 243 RAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNY 302
Query: 355 HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
A +L +M G P +N + Y++AG A + L M S+GL P+ +TY +
Sbjct: 303 TEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTV 362
Query: 415 MSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV 474
M+ YAN G+++EA + + KKN + TY+ + K F L++L EM G
Sbjct: 363 MTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGC 422
Query: 475 QPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
PN +N ++ ++C K ++L M+ G+ L+
Sbjct: 423 TPNRVTWNTML-AVCGKRGMEDYVTRVLNGMKSCGVELS 460
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 99/469 (21%), Positives = 175/469 (37%), Gaps = 67/469 (14%)
Query: 99 IDGDKLENVLSLLQSSVDGYLESSLDSF----ELDLHEDFVLKVLETPLVLGENLVCFFK 154
I L ++ + L S D L S L S EL H ++ L +L +
Sbjct: 89 ISSQPLPSLPAFLSSRRDELLRSDLPSLLKALELSGHWEWALALL--------------R 134
Query: 155 WVTS-GVVDAL-LKAICSSVGKKEVY-ALWDIVKEIGEKEKGVLTVEILNELIALFSKLG 211
W + G DA L+ + ++G++ + + D++ E+ L V ++ S+ G
Sbjct: 135 WASDEGAADAAALEMVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAG 194
Query: 212 KGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAW----SVCEKMIETGSLPDS 267
+ + A ++F + G V TY ++ R +W ++ E+M G PD
Sbjct: 195 RYERALQLFAELRRQGVVPTIVTYNVVLDVYGR---MGRSWPRIVALLEEMRAAGVEPDD 251
Query: 268 EKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF-------------------- 307
+I+ + G +A + + + P VV +
Sbjct: 252 FTASTVIAACGRDGLLDQAVAFFEDLKARGHVP--CVVTYNALLQVFGKAGNYTEALRVL 309
Query: 308 --LISSLCQEDETV--------------KLALDMLDDFSGEARKYAIKPFSSVIRSLCRM 351
+ S CQ D + A LD + + +++V+ + +
Sbjct: 310 KEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANV 369
Query: 352 KDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTY 411
V A L +M G P +N + K T +EML+ M G P+ T+
Sbjct: 370 GRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTW 429
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
+++ G + +LN K LS TY+TLI Y + A K+ +EM
Sbjct: 430 NTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMIS 489
Query: 472 VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
G P + YN L+ L + DW TA+ ++ M G N + +L+
Sbjct: 490 SGFTPCLTTYNALLNVLSRQG-DWSTAQSIVSKMLKNGFKPNDQSYSLL 537
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 117/299 (39%), Gaps = 39/299 (13%)
Query: 190 KEKG-VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
K +G V V N L+ +F K G A V + D GC + TY +R F
Sbjct: 278 KARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFF 337
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
+ A + M G LP++ +++ + G+ EA ++ + K Y P L
Sbjct: 338 EEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMK-KNGYVPNVNTYNL 396
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT-LLSKMISE 367
I + + L+ML++ S +++++ ++C + + T +L+ M S
Sbjct: 397 IFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTML-AVCGKRGMEDYVTRVLNGMKSC 455
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G +N++ISAY + G T A +M M S G P + TY L++ + G A
Sbjct: 456 GVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTA 515
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
I+++ KN G +PN Y+ L+Q
Sbjct: 516 QSIVSKMLKN-----------------------------------GFKPNDQSYSLLLQ 539
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 79/188 (42%), Gaps = 1/188 (0%)
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
G PD +++ + K G +A ++ ++ + P L+ + +E+ +
Sbjct: 596 GYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWE- 654
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A +L K + +++VI C+ + A+ +LS+MI++G P +++++
Sbjct: 655 AEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVG 714
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
Y+ A E++ M LKP TY ++ Y + +EA E L+E
Sbjct: 715 GYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEISDTDQNF 774
Query: 442 SPVTYHTL 449
H L
Sbjct: 775 DQKLQHML 782
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Query: 422 GQMEEACEILNEAK-KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
GQ + C++L+E SRL Y T++ + ++ AL+L E++ GV P +
Sbjct: 158 GQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVT 217
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRA 522
YN ++ W LLE+MR G+ + T + + A
Sbjct: 218 YNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIA 259
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 141/326 (43%), Gaps = 17/326 (5%)
Query: 172 VGKKEVYALWDIVK--EIGEKEKGVLTVEI-LNELIALFSKLGKGKAAFEVFNKFGDYGC 228
+G +++ L D K EI +E G L E+ LI F ++GK A E+F + + GC
Sbjct: 233 LGYCKIHELGDAYKVFEIMPQE-GCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGC 291
Query: 229 VANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHV 288
+ TY + A A E+M+E G P+ +I +FCK GK E
Sbjct: 292 FPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGME 351
Query: 289 VYTLAREKKMYPPQSVVAF--LISSLCQ----EDETVKLALDMLDDFSGEARKYAIKPFS 342
+ + EK + SVV F LI C+ ED L L+ +R Y +
Sbjct: 352 MLSTMLEKGLV--SSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTY-----N 404
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+I CR K + A LL+KM P +N++I KA + A + LM
Sbjct: 405 ELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKD 464
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G PD T+ + G++E+A ++ K+ H+ + Y LI GYCK E+F A
Sbjct: 465 GFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDA 524
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSL 488
L M G PN +N L+ L
Sbjct: 525 HLLFKRMLFEGCFPNSITFNVLLDGL 550
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 125/308 (40%), Gaps = 39/308 (12%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N ++ K+G A F +G + TY I + A+ V E M
Sbjct: 193 FNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMP 252
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G L + +I FC+ GK EA ++ +E +P L+++ C+ +
Sbjct: 253 QEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKET 312
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
EA K+ +M+ G P + +
Sbjct: 313 ------------EALKF------------------------FEEMVENGIEPNVYTYTVL 336
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I + K G M MEML M +GL V + L+ GY G ME+A +L+ K N
Sbjct: 337 IDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKV 396
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC-LKALD--WR 496
+ TY+ LI G+C+ + D A+ LLN+M + + PN+ YN LI LC + +D WR
Sbjct: 397 CPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWR 456
Query: 497 TAEKLLED 504
+++D
Sbjct: 457 LHHLMIKD 464
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 142/370 (38%), Gaps = 61/370 (16%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
NELI F + A + NK + N TY I L + ++ D AW + MI+
Sbjct: 404 NELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIK 463
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE--- 317
G +PD I CK GK ++AH V+ +EK + + LI C+ ++
Sbjct: 464 DGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSD 523
Query: 318 -------------------------------TVKLALDMLDDFSGEARKYAIKPFSSVIR 346
V+ A+ ++D K + ++ +I
Sbjct: 524 AHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIE 583
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
+ R D A L +MIS G P + + I AY + G + A EM+ ++ G+
Sbjct: 584 EILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILL 643
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC------------ 454
D + Y L++ Y GQ++ A +L S TY L++
Sbjct: 644 DSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLD 703
Query: 455 --------------KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
K+ +F+ L +M + G PNV+ Y+KLI+ LC K A +
Sbjct: 704 LNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLC-KVEHLSLAFR 762
Query: 501 LLEDMRLKGL 510
L M+ G+
Sbjct: 763 LFNHMKESGI 772
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 156/365 (42%), Gaps = 15/365 (4%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
L+ A C + E ++ + E G E V T +L I F K+GK E+ +
Sbjct: 300 VLVAAFCEVGKETEALKFFEEMVENG-IEPNVYTYTVL---IDYFCKVGKMDEGMEMLST 355
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ G V++ + I+ +R + + A V + M P+S ++I FC+
Sbjct: 356 MLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKS 415
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDD-FSGEARKYAI 338
A + E K+ P LI LC+ D +L M+ D F + R
Sbjct: 416 MDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRT--- 472
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
F + I LC+M V A + + + ++ ++I Y KA + A + K
Sbjct: 473 --FCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKR 530
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M G P+ T+ L+ G G++E+A +++ K ++ + TY LI + +
Sbjct: 531 MLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESD 590
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG-ITR 517
FD A L++M G QPNV Y I++ C + AE+++ ++ +G+ L+ I
Sbjct: 591 FDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQG-RLLEAEEMVVKIKEEGILLDSFIYD 649
Query: 518 ALIRA 522
L+ A
Sbjct: 650 VLVNA 654
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 139/329 (42%), Gaps = 28/329 (8%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
I K+GK + A +VF + AN+ Y I+ + + F A + ++M+ G
Sbjct: 476 FIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEG 535
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P+S ++ K GK ++A + + + P LI + +E + +
Sbjct: 536 CFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRAN 595
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+ LD + + +++ I++ CR + A+ ++ K+ EG + +++ +++A
Sbjct: 596 M-FLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNA 654
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY-----------------------A 419
Y G + A +L M G +P TY+ L+ A
Sbjct: 655 YGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNA 714
Query: 420 NGGQME--EACEILNEAKKNHSRLSPV-TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
N ++ E +L E + V TY LI+G CK+E A +L N MK+ G+ P
Sbjct: 715 NIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISP 774
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
+ + +N L+ S C + A +LL+ M
Sbjct: 775 SENIHNSLLSSCCKLGMH-EEALRLLDSM 802
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 107/233 (45%), Gaps = 5/233 (2%)
Query: 288 VVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRS 347
+++ L R + ++V +I S C + L++L + ++ ++ +
Sbjct: 109 LLFILVRNGFLRAAENVRNSMIKS-CVSSHEARFVLNLL---THHEFSLSVTSYNRLFMV 164
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
L R + L M+++G P FN++++A+ K G++ A + G D
Sbjct: 165 LSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCD 224
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
+TYT L+ GY ++ +A ++ + + V+Y LI G+C++ + D AL+L
Sbjct: 225 SFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFF 284
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
+MK+ G P+V Y L+ + C + A K E+M G+ N T ++
Sbjct: 285 QMKEDGCFPDVPTYTVLVAAFC-EVGKETEALKFFEEMVENGIEPNVYTYTVL 336
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 13/199 (6%)
Query: 316 DETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
DE L DML+D ++P F++++ + C++ +V AK ++ G
Sbjct: 172 DELNCLFKDMLND--------GVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCC 223
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+ + S+I Y K ++ A ++ ++M G + +YT L+ G+ G+++EA E+
Sbjct: 224 DSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELF 283
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
+ K++ TY L+ +C++ + ALK EM + G++PNV Y LI C K
Sbjct: 284 FQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFC-K 342
Query: 492 ALDWRTAEKLLEDMRLKGL 510
++L M KGL
Sbjct: 343 VGKMDEGMEMLSTMLEKGL 361
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 121/294 (41%), Gaps = 20/294 (6%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N L+ K GK + A + + G + TY IE + R FD A ++MI
Sbjct: 543 FNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMI 602
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISS---LCQED 316
+G P+ I +C+ G+ EA + +E+ + + L+++ + Q D
Sbjct: 603 SSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLD 662
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG-NAV 375
+ + M D +R+ +S +++ L + K EG N+
Sbjct: 663 SAFGVLIRMFDTGCEPSRQ----TYSILLKHL-----------IFEKYNKEGMGLDLNST 707
Query: 376 FNSVISAYS-KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
SV +A K D + + M +G P+V TY+ L+ G + A + N
Sbjct: 708 NISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHM 767
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
K++ S +++L+ CKL + AL+LL+ M + +++ Y L+ L
Sbjct: 768 KESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGL 821
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 107/287 (37%), Gaps = 25/287 (8%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
GC N TY I+A R+ A + K+ E G L DS +++ + G+ A
Sbjct: 605 GCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSA 664
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQED---ETVKLALDMLDDFSGEARKYAIKPF-- 341
V + P + + L+ L E E + L L+ + A + I F
Sbjct: 665 FGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEI 724
Query: 342 --------------------SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
S +I+ LC+++ + A L + M G P + NS++S
Sbjct: 725 ITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLS 784
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
+ K G A+ +L M + +Y L+ G G E+A EI
Sbjct: 785 SCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNY 844
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
V + L+ G + D +L + M+ G + + D + L Q L
Sbjct: 845 DEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTMLSQEL 891
>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
Length = 625
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 148/333 (44%), Gaps = 11/333 (3%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
LLK +C ++ L I+ + K + L V +I + G+ A+ +F+
Sbjct: 177 LLKGLCDDKTSQQALDLLHIMAD--HKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAM 234
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
D G + TY I ALS+ + D A V +M++ G +PD ++ +C GK
Sbjct: 235 LDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKP 294
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
KEA ++ + P L+ LC+ ++ + A + D K KP S+
Sbjct: 295 KEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTE-ARKIFDSLV----KRGHKPDST 349
Query: 344 VIRSLCRMKDVHGA----KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
+L GA LL M+ +G G+ +FN ++ AY+K + A+ + M
Sbjct: 350 TYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNM 409
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
R +GL PD+ Y ++ G++++A N K + V + TLI G C +++
Sbjct: 410 RQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKW 469
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
D +L EM D G+ + +N ++ +LC K
Sbjct: 470 DKVEELAFEMIDRGICLDTIFFNAIMGNLCKKG 502
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 144/343 (41%), Gaps = 11/343 (3%)
Query: 152 FFKWVTSGVV------DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIA 205
F + V +GV+ +L+ CSS KE ++ + G + V +++ L
Sbjct: 266 FTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYL-- 323
Query: 206 LFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLP 265
K GK A ++F+ G + TY + + + + M++ G
Sbjct: 324 --CKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQL 381
Query: 266 DSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDM 325
I+ + K K EA +V++ R++ + P ++ LC V AL
Sbjct: 382 GHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGR-VDDALSQ 440
Query: 326 LDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSK 385
+ E I F+++I LC + L +MI G FN+++ K
Sbjct: 441 FNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCK 500
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
G + A + LM G++P+ TY L+ GY G+M+EA ++L N + S VT
Sbjct: 501 KGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVT 560
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
Y+T+I GY + + L LL EM GV P + Y L+Q L
Sbjct: 561 YNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGL 603
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 128/306 (41%), Gaps = 11/306 (3%)
Query: 216 AFEVFNKFGDYGCVA---NQETYYFTIEALSRRKIFDWAWSVCEKMIETG--SLPDSEKV 270
A +FN+ G + N TY I R D A++ ++I TG P+ +
Sbjct: 80 AISLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRHEPNPLQS 139
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLD--- 327
GG+A +V E P L+ LC +D+T + ALD+L
Sbjct: 140 SSQGPLCTAGGRAMRMDIVLRRMPELGCKPDLFSYTILLKGLC-DDKTSQQALDLLHIMA 198
Query: 328 DFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG 387
D G + +++VI L R + A +L M+ GP P ++S+ISA SK
Sbjct: 199 DHKGRC-PLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQ 257
Query: 388 DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYH 447
M A ++ M G+ PD YT L+ GY + G+ +EA I + ++ VTY
Sbjct: 258 AMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYT 317
Query: 448 TLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRL 507
L+ CK + A K+ + + G +P+ Y L+ + LL+ M
Sbjct: 318 ALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGA-LVEMHDLLDLMMK 376
Query: 508 KGLHLN 513
KG+ L
Sbjct: 377 KGMQLG 382
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/302 (19%), Positives = 118/302 (39%), Gaps = 38/302 (12%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+ +C + E ++D + + G K +L+ ++ G ++ +
Sbjct: 318 ALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHG----YATEGALVEMHDLLDL 373
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + + A ++ D A V M + G PD G ++ C G+
Sbjct: 374 MMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGR 433
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLC---QEDETVKLALDMLD------------ 327
+A + + + + P V LI LC + D+ +LA +M+D
Sbjct: 434 VDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNA 493
Query: 328 ---DFSGEAR------------KYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEG 368
+ + R + I+P ++++I C + A LL M+ G
Sbjct: 494 IMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNG 553
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P + +N++I+ YS+ G + + +L+ M +G+ P + TY L+ G G+ A
Sbjct: 554 VKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAK 613
Query: 429 EI 430
E+
Sbjct: 614 EL 615
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 126/286 (44%), Gaps = 1/286 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI LFS GK A + G V + Y I R A V ++M+ G
Sbjct: 303 LIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLG 362
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
LPD +++ CK + +A + +E+ + P LI C+ D + A
Sbjct: 363 CLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCR-DGNFEKA 421
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
L + D + + + ++S+I +CR D+ A L M + P + ++ +I +
Sbjct: 422 LQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDS 481
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ + G + A L M S+G P++ TY ++ GY G +++ + L + +++
Sbjct: 482 HCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPD 541
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+T++TLI GY K E A + N M+ VQP+ YN +I
Sbjct: 542 LITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGF 587
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 148/336 (44%), Gaps = 39/336 (11%)
Query: 187 IGEKEKGVLTVEIL--NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSR 244
I E EK + +++ N LI + G AA + + + G T+ ++ L +
Sbjct: 180 ISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCK 239
Query: 245 RKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSV 304
+ FD A V M + PD +I FC+ G+ +EA Y +++ + P V
Sbjct: 240 HRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTP--DV 297
Query: 305 VAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM 364
V+F S L I FS+ R K H A L +M
Sbjct: 298 VSF--SCL-------------------------IGLFST------RGKMDHAA-AYLREM 323
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
G P ++ VI + +AG M+ A+ + M G PDV TY L++G ++
Sbjct: 324 KGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRL 383
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
+A E+LNE K+ T+ TLI GYC+ F+ AL+L + + ++P+V YN L
Sbjct: 384 LDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSL 443
Query: 485 IQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
I +C K D A +L +DM + + N +T +++
Sbjct: 444 IDGMCRKG-DLAKANELWDDMHAREIFPNHVTYSIL 478
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 164/361 (45%), Gaps = 12/361 (3%)
Query: 154 KWVTSGVVD-ALLKAICSSVGKKEVYALW-DIVKEIGEKEKGVLTVEILNELIALFSKLG 211
+ VT VV + L + S+ GK + A + +K +G GV I +I F + G
Sbjct: 291 RGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGV----IYTMVIGGFCRAG 346
Query: 212 KGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVG 271
A V ++ GC+ + TY + L ++ A + +M E G PD
Sbjct: 347 SMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFT 406
Query: 272 KIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDF 329
+I +C+ G ++A ++ +++ P VVA+ LI +C++ + K A ++ DD
Sbjct: 407 TLIHGYCRDGNFEKALQLFDTLLHQRLRP--DVVAYNSLIDGMCRKGDLAK-ANELWDDM 463
Query: 330 SGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
+S +I S C V A L +M+S+G P +NS+I Y ++G++
Sbjct: 464 HAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNV 523
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
+ L+ M + PD+ T+ L+ GY M A + N +K + VTY+ +
Sbjct: 524 KKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMI 583
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
I G+ + + A ++ +M G++P+ Y LI + A + + A +L ++M +G
Sbjct: 584 INGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGH-VTAGNSKEAFQLHDEMMHRG 642
Query: 510 L 510
Sbjct: 643 F 643
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 124/281 (44%), Gaps = 1/281 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V N L+ K + A E+ N+ + G + T+ I R F+ A + +
Sbjct: 367 VVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFD 426
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
++ PD +I C+ G +A+ ++ ++++P + LI S C++
Sbjct: 427 TLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKG 486
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ V+ A LD+ + I ++S+I+ CR +V + L KM+ + P F
Sbjct: 487 Q-VEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITF 545
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N++I Y K +M A + +M ++PD TY +++G++ G MEEA + +
Sbjct: 546 NTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGA 605
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
+ TY +LI G+ A +L +EM G P+
Sbjct: 606 SGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 66/136 (48%), Gaps = 1/136 (0%)
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
N ++ +Y K+ + A ++ M R + PDV T+ L+ G ++ A +++
Sbjct: 159 TLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM 218
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
+ VT++++++G CK FD A ++ M V P+V +N LI C + +
Sbjct: 219 ANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFC-RVGE 277
Query: 495 WRTAEKLLEDMRLKGL 510
A K ++M+ +G+
Sbjct: 278 VEEAMKFYKEMQQRGV 293
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 3/165 (1%)
Query: 348 LCRMKDVHGA--KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
L RM GA + ++S +++ P P VF+ +I Y+++ A E +L+ +
Sbjct: 60 LLRMSRRRGASRREIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVP 119
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
L++ + G A E + S ++ T + ++ YCK EFD A +
Sbjct: 120 VPASASNALLAALSRAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTV 179
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
++EM+ V P+V +N LI + +A D A L++ M KGL
Sbjct: 180 ISEMEKRCVFPDVVTHNVLIDAR-FRAGDVDAAIALVDSMANKGL 223
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 55/107 (51%)
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
S+AG A E +L+ S + + YT ++ Y + ++A +++E +K
Sbjct: 132 LSRAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPD 191
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
VT++ LI + + D A+ L++ M + G++P + +N +++ LC
Sbjct: 192 VVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLC 238
>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
[Oryza sativa Japonica Group]
gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 793
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 162/348 (46%), Gaps = 23/348 (6%)
Query: 167 AICSSVGKKEVYALWDIVKEI--GEKEKGV-LTVEILNELIALFSKLGKGKAAFEVFNKF 223
A+C G + D V + G K GV L+ + N LI+ + + G AF+++++
Sbjct: 434 AVCGKRGME------DYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEM 487
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
G TY + LSR+ + A S+ KM++ G P+ + ++ + KGG A
Sbjct: 488 ISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNA 547
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISS--LCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ ++P ++ L+ + C+ E V+ A E + KP
Sbjct: 548 AGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQ-------EVKAQGYKPD 600
Query: 342 SSVIRSLCRMKDVHG----AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+ S+ M +G A + + G P +NS++ Y+K+ + A ++LK
Sbjct: 601 LVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILK 660
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
++S +KPDV +Y +++G+ G ++EA IL+E + VTYHTL+ GY LE
Sbjct: 661 QLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLE 720
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
F+ A +++N M ++P Y +++ S C KA + A + L ++
Sbjct: 721 MFNEAREVVNYMIHHNLKPMELTYRRVVDSYC-KAKRYDEAREFLSEI 767
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 121/279 (43%), Gaps = 1/279 (0%)
Query: 235 YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR 294
Y + ALSR ++ A + ++ G +P ++ + + G++ V
Sbjct: 183 YTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEM 242
Query: 295 EKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDV 354
P A + + C D + A+ +D + ++++++ + +
Sbjct: 243 RAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNY 302
Query: 355 HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
A +L +M G P +N + Y++AG A + L M S+GL P+ +TY +
Sbjct: 303 TEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTV 362
Query: 415 MSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV 474
M+ YAN G+++EA + + KKN + TY+ + K F L++L EM G
Sbjct: 363 MTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGC 422
Query: 475 QPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
PN +N ++ ++C K ++L M+ G+ L+
Sbjct: 423 TPNRVTWNTML-AVCGKRGMEDYVTRVLNGMKSCGVELS 460
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 99/469 (21%), Positives = 175/469 (37%), Gaps = 67/469 (14%)
Query: 99 IDGDKLENVLSLLQSSVDGYLESSLDSF----ELDLHEDFVLKVLETPLVLGENLVCFFK 154
I L ++ + L S D L S L S EL H ++ L +L +
Sbjct: 89 ISSQPLPSLPAFLSSRRDELLRSDLPSLLKALELSGHWEWALALL--------------R 134
Query: 155 WVTS-GVVDAL-LKAICSSVGKKEVY-ALWDIVKEIGEKEKGVLTVEILNELIALFSKLG 211
W + G DA L+ + ++G++ + + D++ E+ L V ++ S+ G
Sbjct: 135 WASDEGAADAAALEMVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAG 194
Query: 212 KGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAW----SVCEKMIETGSLPDS 267
+ + A ++F + G V TY ++ R +W ++ E+M G PD
Sbjct: 195 RYERALQLFAELRRQGVVPTIVTYNVVLDVYGR---MGRSWPRIVALLEEMRAAGVEPDD 251
Query: 268 EKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF-------------------- 307
+I+ + G +A + + + P VV +
Sbjct: 252 FTASTVIAACGRDGLLDQAVAFFEDLKARGHVP--CVVTYNALLQVFGKAGNYTEALRVL 309
Query: 308 --LISSLCQEDETV--------------KLALDMLDDFSGEARKYAIKPFSSVIRSLCRM 351
+ S CQ D + A LD + + +++V+ + +
Sbjct: 310 KEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANV 369
Query: 352 KDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTY 411
V A L +M G P +N + K T +EML+ M G P+ T+
Sbjct: 370 GRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTW 429
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
+++ G + +LN K LS TY+TLI Y + A K+ +EM
Sbjct: 430 NTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMIS 489
Query: 472 VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
G P + YN L+ L + DW TA+ ++ M G N + +L+
Sbjct: 490 SGFTPCLTTYNALLNVLSRQG-DWSTAQSIVSKMLKNGFKPNDQSYSLL 537
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 117/299 (39%), Gaps = 39/299 (13%)
Query: 190 KEKG-VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
K +G V V N L+ +F K G A V + D GC + TY +R F
Sbjct: 278 KARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFF 337
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
+ A + M G LP++ +++ + G+ EA ++ + K Y P L
Sbjct: 338 EEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMK-KNGYVPNVNTYNL 396
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT-LLSKMISE 367
I + + L+ML++ S +++++ ++C + + T +L+ M S
Sbjct: 397 IFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTML-AVCGKRGMEDYVTRVLNGMKSC 455
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G +N++ISAY + G T A +M M S G P + TY L++ + G A
Sbjct: 456 GVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTA 515
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
I+++ KN G +PN Y+ L+Q
Sbjct: 516 QSIVSKMLKN-----------------------------------GFKPNDQSYSLLLQ 539
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 79/188 (42%), Gaps = 1/188 (0%)
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
G PD +++ + K G +A ++ ++ + P L+ + +E+ +
Sbjct: 596 GYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWE- 654
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A +L K + +++VI C+ + A+ +LS+MI++G P +++++
Sbjct: 655 AEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVG 714
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
Y+ A E++ M LKP TY ++ Y + +EA E L+E
Sbjct: 715 GYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEISDTDQNF 774
Query: 442 SPVTYHTL 449
H L
Sbjct: 775 DQKLQHML 782
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Query: 422 GQMEEACEILNEAK-KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
GQ + C++L+E SRL Y T++ + ++ AL+L E++ GV P +
Sbjct: 158 GQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVT 217
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRA 522
YN ++ W LLE+MR G+ + T + + A
Sbjct: 218 YNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIA 259
>gi|299471535|emb|CBN80021.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 607
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 133/284 (46%), Gaps = 2/284 (0%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G + +Q++Y I A R ++ A + +M G+ PD +I KGG+ K A
Sbjct: 28 GWLIDQKSYCMAITACGRGGQWEQAVRLLREMPTEGAAPDLSAYSAVIDACAKGGQWKMA 87
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
V + + K P + + C K+ALD+L + + ++S I
Sbjct: 88 -VFFLMEMPTKGIAPDARSYGAAINACARGGRWKIALDLLREMLARDVTPNVIIYNSAIN 146
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
S + A +L+ +M + G P ++S ISA + G A+E+ + MR+ G+ P
Sbjct: 147 SCAKAGQWEIAVSLVKEMATVGLAPDVISYSSAISACGRGGRWEEALELFEDMRTSGVAP 206
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
DV TY ++ ANGG+ +EA +L + + ++Y ++I K ++ AL LL
Sbjct: 207 DVITYGSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSSVITACAKEGQWKIALDLL 266
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
EMK + + PN+ YN I + C K W+ A LL +M GL
Sbjct: 267 REMKAMRLAPNIITYNAAIDA-CAKGGRWKEAIDLLREMPTVGL 309
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 148/323 (45%), Gaps = 16/323 (4%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N I +K G+ K A ++ + G + +Y I+A S+ + A + +M
Sbjct: 282 NAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVIDACSKGDRWKEAIDILREMPT 341
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS-----SLCQE 315
G P++ I KGG+ KEA L RE P V +I + C +
Sbjct: 342 VGLSPNAISYNSAIDACAKGGQWKEAK---GLLRE---MPTAGVTQRVIGYNSAIAACAK 395
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
E K AL +L + + +SS I + + AK LL +M + G P
Sbjct: 396 GEQWKEALALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKELLREMATVGLAPNEVC 455
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+NS I A + A+++L+ M + GL PDV++Y+ ++ A G Q +EA +L E
Sbjct: 456 YNSAIDACGRGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAACAKGDQWKEALAVLKE-- 513
Query: 436 KNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
+ + L+P + Y++ I K + A+ LL EM+ G+ PN+ Y+ I + C++
Sbjct: 514 MSAAGLAPDLICYNSAIDACSKGGRWKMAVALLGEMRAAGLTPNIISYSSAIDA-CVRGG 572
Query: 494 DWRTAEKLLEDMRLKGLHLNGIT 516
W+ LLE+MR G+ + IT
Sbjct: 573 QWKEGIALLEEMRGSGVVPDVIT 595
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 145/318 (45%), Gaps = 4/318 (1%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V I N I +K G+ + A + + G + +Y I A R ++ A + E
Sbjct: 138 VIIYNSAINSCAKAGQWEIAVSLVKEMATVGLAPDVISYSSAISACGRGGRWEEALELFE 197
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL-ISSLCQE 315
M +G PD G I+ GG+ KEA V L + + +V+++ + + C +
Sbjct: 198 DMRTSGVAPDVITYGSAIAACANGGRWKEA--VSLLRKIPTVGLTPNVISYSSVITACAK 255
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ K+ALD+L + I +++ I + + A LL +M + G PP
Sbjct: 256 EGQWKIALDLLREMKAMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVS 315
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
++SVI A SK A+++L+ M + GL P+ +Y + A GGQ +EA +L E
Sbjct: 316 YSSVIDACSKGDRWKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMP 375
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+ Y++ I K E++ AL LL EM VG+ V Y+ I + C K W
Sbjct: 376 TAGVTQRVIGYNSAIAACAKGEQWKEALALLREMPTVGLHTTVFSYSSAIDA-CGKGNLW 434
Query: 496 RTAEKLLEDMRLKGLHLN 513
A++LL +M GL N
Sbjct: 435 IKAKELLREMATVGLAPN 452
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 134/304 (44%), Gaps = 2/304 (0%)
Query: 208 SKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDS 267
++ G+ K A ++ + N Y I + ++ ++ A S+ ++M G PD
Sbjct: 114 ARGGRWKIALDLLREMLARDVTPNVIIYNSAINSCAKAGQWEIAVSLVKEMATVGLAPDV 173
Query: 268 EKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLD 327
IS +GG+ +EA ++ R + P I++ C K A+ +L
Sbjct: 174 ISYSSAISACGRGGRWEEALELFEDMRTSGVAPDVITYGSAIAA-CANGGRWKEAVSLLR 232
Query: 328 DFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG 387
+ +SSVI + + A LL +M + P +N+ I A +K G
Sbjct: 233 KIPTVGLTPNVISYSSVITACAKEGQWKIALDLLREMKAMRLAPNIITYNAAIDACAKGG 292
Query: 388 DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYH 447
A+++L+ M + GL PDV +Y+ ++ + G + +EA +IL E + ++Y+
Sbjct: 293 RWKEAIDLLREMPTVGLPPDVVSYSSVIDACSKGDRWKEAIDILREMPTVGLSPNAISYN 352
Query: 448 TLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRL 507
+ I K ++ A LL EM GV V YN I + C K W+ A LL +M
Sbjct: 353 SAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYNSAIAA-CAKGEQWKEALALLREMPT 411
Query: 508 KGLH 511
GLH
Sbjct: 412 VGLH 415
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%)
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
C + + A+D+L + + +SS I + + A +L +M + G P
Sbjct: 463 CGRGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAACAKGDQWKEALAVLKEMSAAGLAPD 522
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+NS I A SK G A+ +L MR+ GL P++ +Y+ + GGQ +E +L
Sbjct: 523 LICYNSAIDACSKGGRWKMAVALLGEMRAAGLTPNIISYSSAIDACVRGGQWKEGIALLE 582
Query: 433 EAKKNHSRLSPVTYHTLI 450
E + + +TYH L+
Sbjct: 583 EMRGSGVVPDVITYHALM 600
>gi|255660832|gb|ACU25585.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
gi|410109881|gb|AFV61020.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
virgata]
Length = 418
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 166/391 (42%), Gaps = 57/391 (14%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L++ + S GK A++ + E ++ + + + LI + + G + A E +
Sbjct: 34 SLIRVVVSRKGKGSASAVFAAILETKGTQRS--DIYVFSGLITAYLESGFLRDAIECYRL 91
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
++ +T +E L + K F W E++++ G ++ FCK G
Sbjct: 92 TREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILDCGYPASLYFFNILMHRFCKEGD 151
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAF----------------------------------- 307
+ A +V+ + + P SVV+F
Sbjct: 152 IRVAQLVFNAITKWGLRP--SVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTY 209
Query: 308 --LISSLCQEDETVKLALDMLDDFSG---EARKYAIKP----FSSVIRSLCRMKDVHGAK 358
LI+ LC+E + +DD +G E + P F+++I C+ + V A
Sbjct: 210 SVLINGLCKESK--------MDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVDLAM 261
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+ +M+S+ P +N++I K GD+ A +++ M +GLKPD TYT L+ G
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGC 321
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G +E A E + + RL V Y LI G C+ + A K+L EM VG++P+
Sbjct: 322 CKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSVGLKPDT 381
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
Y +I C K W T KLL++M+ G
Sbjct: 382 GTYTMIINEFCKKGDVW-TGSKLLKEMQRDG 411
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 122/244 (50%), Gaps = 2/244 (0%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
+I+ + + G ++A Y L RE K + P ++ L + + KL ++
Sbjct: 72 LITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHL-MKLKYFKLVWGFYEEILDC 130
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
++ F+ ++ C+ D+ A+ + + + G P FN++++ Y + GD+
Sbjct: 131 GYPASLYFFNILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEG 190
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
+ M + G++PDVYTY+ L++G +M++A + +E + VT+ TLI G
Sbjct: 191 FRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAG 250
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
+CK D A+++ +M + P++ YN LI LC K D + A L+++M +KGL
Sbjct: 251 HCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG-DLKQAHDLIDEMSMKGLKP 309
Query: 513 NGIT 516
+ IT
Sbjct: 310 DKIT 313
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 124/283 (43%), Gaps = 1/283 (0%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
++ N L+ F K G + A VFN +G + ++ + R D + +
Sbjct: 135 SLYFFNILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLK 194
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
M +G PD +I+ CK K +A+ ++ +K + P LI+ C+
Sbjct: 195 SAMHASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCK- 253
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ V LA+++ ++ + ++++I LC+ D+ A L+ +M +G P
Sbjct: 254 NRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKIT 313
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+ ++I K GD+ A E K M ++ D YT L+SG G+ +A ++L E
Sbjct: 314 YTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREML 373
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
+ TY +I +CK + KLL EM+ G P+V
Sbjct: 374 SVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSV 416
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 36/188 (19%), Positives = 78/188 (41%), Gaps = 30/188 (15%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS-EGPPPGNAVFNSVISAYSKAGDMTPAM 393
++ + + ++I LC + + AK+L+ ++S +G +AVF +++
Sbjct: 10 RHTLDSYCTMIHLLCTHQMLSEAKSLIRVVVSRKGKGSASAVFAAILETKGTQ------- 62
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
+ D+Y ++GL++ Y G + +A E +++ + T ++
Sbjct: 63 -----------RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHL 111
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
KL+ F E+ D G ++ +N L+ C + D+R+ L N
Sbjct: 112 MKLKYFKLVWGFYEEILDCGYPASLYFFNILMHRFCKEG-----------DIRVAQLVFN 160
Query: 514 GITRALIR 521
IT+ +R
Sbjct: 161 AITKWGLR 168
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 169/417 (40%), Gaps = 56/417 (13%)
Query: 155 WVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEK--GVLTVEILNELIALFSKLGK 212
WV V+ + +C GK + + VK GE + V + L+ + K G
Sbjct: 290 WVPHEVIFTRVIGVCMKQGK-----MLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGD 344
Query: 213 GKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGK 272
+A E+F+K + G N TY IE + D A+ + +M P V
Sbjct: 345 LDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNS 404
Query: 273 II----------------------------------SWFCKGGKAKEAHVVYTLAREKKM 298
+I SW CK GK EA ++ K +
Sbjct: 405 LIRGYLKARSPEEASKLFDEAVACGIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGV 464
Query: 299 YPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMK 352
P SVV++ +I CQ+ + +D + E + +KP +S ++ +
Sbjct: 465 RP--SVVSYNNMILGHCQQGD-----MDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKG 517
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT 412
D A L +M E P + N +I+ KAG + + + LK + G P TY
Sbjct: 518 DTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYN 577
Query: 413 GLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
++ G+ G + A + E K + TY LI G+CK D ALK+++EMK+
Sbjct: 578 CIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNK 637
Query: 473 GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAVKELEE 528
G++ +V Y LI C K D A +LL +++ GL N + ++I ++L+
Sbjct: 638 GIELDVTVYCALIDGFCRKG-DMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQN 693
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 136/304 (44%), Gaps = 2/304 (0%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
+ K G + AF ++++ + T I L + + +K+++ G +P
Sbjct: 513 YFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPT 572
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
II F K G A VYT + + P LI+ C+ + + LAL ++
Sbjct: 573 CMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSN-NMDLALKVM 631
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
D+ + + + + ++I CR D+ A LLS++ G P V++S+IS + K
Sbjct: 632 DEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKL 691
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
+M A+ + K M + G+ D+ YT L+SG G++ A E+ E +TY
Sbjct: 692 QNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITY 751
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
LI G C + + A K+L +M + P V YN LI K + + A +L +M
Sbjct: 752 SVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGH-FKEGNLQEAFRLHNEML 810
Query: 507 LKGL 510
KGL
Sbjct: 811 DKGL 814
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 132/290 (45%), Gaps = 9/290 (3%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I K G+ + + K G + TY I+ + + A +V +M +
Sbjct: 542 NIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCK 601
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ +I+ FCK A V + K + +V LI C++ + V
Sbjct: 602 IGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVN 661
Query: 321 LALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ E ++ + P +SS+I +++++ A L +MI+EG P ++
Sbjct: 662 AS-----QLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIY 716
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
++IS K G + A E+ M ++G+ PD+ TY+ L+ G N GQ+E A +IL + +
Sbjct: 717 TTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDR 776
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
+ Y+TLI G+ K A +L NEM D G+ P+ Y+ L+
Sbjct: 777 KCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVN 826
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 129/294 (43%), Gaps = 6/294 (2%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
+ N L+ + K + A + FN + V + L + + A V K
Sbjct: 155 RVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNK 214
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M G D + +I + GK +EA + A+ K + + +I ++C++ +
Sbjct: 215 MASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPD 274
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
+V AL +L + + F+ VI + + A + +M+S G P V
Sbjct: 275 SVA-ALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVAT 333
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+++ Y K GD+ A+E+ M G+ P+ TY ++ G M++A EI N+ K
Sbjct: 334 TLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMK-- 391
Query: 438 HSRLSPVTYH--TLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ +SP ++ +LIRGY K + A KL +E G+ NV YN L+ LC
Sbjct: 392 NKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIA-NVFTYNSLLSWLC 444
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 124/279 (44%), Gaps = 10/279 (3%)
Query: 230 ANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVV 289
++ + + + + + K + A +IE +P + +S K +EA V
Sbjct: 152 SDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDV 211
Query: 290 YTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI----KPFSSVI 345
Y K + + ++ +I + +E + L+ + + EA+ + + +S VI
Sbjct: 212 YNKMASKGVKGDCATISVMIRASMREGK-----LEEAEGWFREAKNKGVELDARAYSIVI 266
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
++C+ D A LL +M +G P +F VI K G M A+++ M S G
Sbjct: 267 EAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKP 326
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
+V T LM GY G ++ A E+ ++ +N + VTY +I CK D A ++
Sbjct: 327 MNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEI 386
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLED 504
N+MK+ + P V N LI+ LKA A KL ++
Sbjct: 387 YNQMKNKDISPTVFNVNSLIRGY-LKARSPEEASKLFDE 424
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 114/266 (42%), Gaps = 1/266 (0%)
Query: 190 KEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
+E + T N +I F K G +A V+ + G N TY I + D
Sbjct: 566 QEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMD 625
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A V ++M G D +I FC+ G A + + +E + P + V + +I
Sbjct: 626 LALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMI 685
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
S ++ + ++ AL + E ++ ++++I L + + A L ++M+++G
Sbjct: 686 SGF-RKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGI 744
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
P ++ +I G + A ++L+ M + + P V+ Y L++G+ G ++EA
Sbjct: 745 MPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFR 804
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCK 455
+ NE TY L+ G K
Sbjct: 805 LHNEMLDKGLVPDDTTYDILVNGKVK 830
>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
Length = 671
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 115/264 (43%)
Query: 226 YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKE 285
YG + T + +L + F +M+ETG+ P+ I CK K+
Sbjct: 210 YGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQ 269
Query: 286 AHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVI 345
A V + + P LI LC+ T + L + K + ++ +I
Sbjct: 270 AFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMI 329
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
CR + A+ LL +M+ +G P + ++I + K G A E++ M+ G
Sbjct: 330 GGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFL 389
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
P++YTY ++ G+ G+++EA ++L A + +TY LI +CK AL L
Sbjct: 390 PNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDL 449
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLC 489
+ M + G P+++ Y LI + C
Sbjct: 450 FDRMVENGCCPDIEAYTSLISTYC 473
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 144/328 (43%), Gaps = 11/328 (3%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
E++ ++A F + G+ A ++ + +G ET + + F +A V +
Sbjct: 112 EVMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDG 171
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M G PD ++ C+ GK +E + + ++ SLC++
Sbjct: 172 MTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGR 231
Query: 318 TVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
+ +F + P +++ I LC+ + V A +L +M+ G P
Sbjct: 232 -----FKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNV 286
Query: 374 AVFNSVISAYSKAGDMTPAMEM-LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
++I K G A + LKL++S KP+V+TYT ++ GY G++ A +L
Sbjct: 287 YTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLV 346
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
+ + + TY TLI G+CK FD A +L+N+MK G PN+ YN +I C K
Sbjct: 347 RMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKG 406
Query: 493 LDWRTAEKLLEDMRLKGLHLNGITRALI 520
+ A K+L +GL + IT ++
Sbjct: 407 -KIQEAYKVLRMATSQGLKFDKITYTIL 433
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 145/332 (43%), Gaps = 6/332 (1%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ K E F + + G N Y I+ L +R+ A+ V E+M+ G P+
Sbjct: 230 GRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTH 289
Query: 271 GKIISWFCKGGKAKEAHVVY-TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDF 329
+I CK G + A ++ L + P +I C+E + + + +L
Sbjct: 290 TTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEM-LLVRM 348
Query: 330 SGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
+ K ++++I C+ A L++KM EG P +N+VI + K G +
Sbjct: 349 VEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKI 408
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
A ++L++ S+GLK D TYT L++ + G + A ++ + +N Y +L
Sbjct: 409 QEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSL 468
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
I YC+ + + + K ++ +G+ P Y +I C K A ++ E M G
Sbjct: 469 ISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYC-KVGRSTLALRVFERMVQNG 527
Query: 510 LHLNGITR-ALIRAVKELEEDAIENGEALVEA 540
+ IT ALI + +E +E +AL E
Sbjct: 528 CFADSITYGALISGL--CKESRLEEAKALYEG 557
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 110/277 (39%), Gaps = 6/277 (2%)
Query: 203 LIALFSKLGKGKAAFEVFNKF---GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
LI K+G + AF +F K Y N TY I R A + +M+
Sbjct: 292 LIDGLCKIGWTERAFRLFLKLIKSSSYK--PNVHTYTVMIGGYCREGKLARAEMLLVRMV 349
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
E G P++ +I CKGG A + +++ P +I C++ + +
Sbjct: 350 EQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGK-I 408
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
+ A +L + + K+ ++ +I C+ + A L +M+ G P + S+
Sbjct: 409 QEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSL 468
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
IS Y + M + + GL P TYT +++GY G+ A + +N
Sbjct: 469 ISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGC 528
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
+TY LI G CK + A L M D + P
Sbjct: 529 FADSITYGALISGLCKESRLEEAKALYEGMLDKRLVP 565
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 4/199 (2%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+E LI+ + + + + + + F+K G + ++TY I + A V E
Sbjct: 462 IEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFE 521
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M++ G DS G +IS CK + +EA +Y +K++ P + L C+ +
Sbjct: 522 RMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRRE 581
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+T +A+ +LD ++ + V+R L + DV A L K++ E +A +
Sbjct: 582 KT-SIAVSVLDRLD---KRQQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATY 637
Query: 377 NSVISAYSKAGDMTPAMEM 395
I++ + A EM
Sbjct: 638 TGFINSCYENNRYALASEM 656
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 137/289 (47%), Gaps = 2/289 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
+N L+ + K + A ++F++ D G VAN TY + L + D A S+ + M+
Sbjct: 438 VNSLLRGYLKAPLWEEASKLFDEAVDCG-VANIFTYNIMMSWLCKGGKMDEACSLLDNMV 496
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
G +P+ +I C+ G A V++ + + P + LI ++ ++
Sbjct: 497 NQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSE 556
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
K ALD+ D F+++I LC++ + A+ L + EG P +NS+
Sbjct: 557 K-ALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSI 615
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+ + K G++ A+ + + M G+ P+V TYT L++G+ +++ A + +E ++
Sbjct: 616 VDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGL 675
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
L Y LI G+CK + + A L E+ +VG+ PN YN +I
Sbjct: 676 ELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGF 724
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 152/369 (41%), Gaps = 41/369 (11%)
Query: 195 LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSV 254
+ + + L+ + G +A +FNK + G N+ TY IE + A +
Sbjct: 363 MNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASEL 422
Query: 255 CEKMIETGSLPDSEKVGKII----------------------------------SWFCKG 280
+M G P V ++ SW CKG
Sbjct: 423 YTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKG 482
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAI 338
GK EA + + M P +VV++ +I C++ + +A + D K +
Sbjct: 483 GKMDEACSLLDNMVNQGMVP--NVVSYNDMILGHCRKG-NMDMASSVFSDMLARDLKPNV 539
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
+S +I + D A L +M+S P + FN++I+ K G M+ A + LK
Sbjct: 540 VTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKN 599
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
G P TY ++ G+ G ++ A + E + + VTY +LI G+CK
Sbjct: 600 FLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNR 659
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-R 517
D ALK +EM++ G++ +V Y+ LI C K D +A+ L ++ GL N I
Sbjct: 660 IDLALKTRDEMREKGLELDVTAYSALIDGFC-KRRDMESAQDLFFELLEVGLSPNRIVYN 718
Query: 518 ALIRAVKEL 526
++I ++L
Sbjct: 719 SMISGFRDL 727
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 129/313 (41%), Gaps = 36/313 (11%)
Query: 209 KLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSE 268
K G + A ++F++ T+ I L + A + +E G +P
Sbjct: 551 KKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCM 610
Query: 269 KVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDD 328
I+ F K G A VY E + P LI+ C+ + + LAL D+
Sbjct: 611 TYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNR-IDLALKTRDE 669
Query: 329 FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD 388
+ + + +S++I C+ +D+ A+ L +++ G P V+NS+IS + +
Sbjct: 670 MREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNN 729
Query: 389 MTPAM-----------------------------------EMLKLMRSRGLKPDVYTYTG 413
M A+ ++ M S+G+ PD+ T+
Sbjct: 730 MEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHV 789
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
L++G N GQ+E A +IL E + + S + Y+TLI GY + A L +EM D G
Sbjct: 790 LVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRG 849
Query: 474 VQPNVDEYNKLIQ 486
+ P+ Y+ LI
Sbjct: 850 LVPDDVTYDILIN 862
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 146/322 (45%), Gaps = 3/322 (0%)
Query: 195 LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSV 254
L + N L+ + + + + A + FN + + AL RR + +
Sbjct: 188 LDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDL 247
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
KM+ G D V ++ K G+ +EA + +E+ + + +I ++C+
Sbjct: 248 YNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCK 307
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
+ + L L++L++ + F+SVI + ++ A L +MI+ G P
Sbjct: 308 KPNS-NLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLV 366
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
V S++ Y G++ A+ + + GL P+ TY+ L+ G N G +E+A E+ +
Sbjct: 367 VATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQM 426
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
K N S ++L+RGY K ++ A KL +E D GV N+ YN ++ LC K
Sbjct: 427 KLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLC-KGGK 484
Query: 495 WRTAEKLLEDMRLKGLHLNGIT 516
A LL++M +G+ N ++
Sbjct: 485 MDEACSLLDNMVNQGMVPNVVS 506
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/390 (21%), Positives = 157/390 (40%), Gaps = 29/390 (7%)
Query: 119 LESSLDSFELDLHEDFV-----LKVLETPLV----LGENLVCFFKWVTSGV------VDA 163
+E+++D F + +D + + +L T LV +GE + K V G+ V
Sbjct: 206 IENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHV 265
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEK-EKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+++A +E + KE G K + G ++ +I K E+ +
Sbjct: 266 MVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSI-----IIQAVCKKPNSNLGLELLEE 320
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ G V ++ T+ I A + A + E+MI G + ++ +C G
Sbjct: 321 MKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGN 380
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
A ++ E ++P + + LI C K + + + + I P
Sbjct: 381 LDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKAS-----ELYTQMKLNGIPPSV 435
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA---VFNSVISAYSKAGDMTPAMEMLKLM 399
+ SL R SK+ E G A +N ++S K G M A +L M
Sbjct: 436 FNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNM 495
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
++G+ P+V +Y ++ G+ G M+ A + ++ + + VTY LI G K +
Sbjct: 496 VNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDS 555
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ AL L ++M + + P +N +I LC
Sbjct: 556 EKALDLFDQMLSLNIAPTDFTFNTIINGLC 585
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 106/252 (42%), Gaps = 1/252 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N ++ F K G +A V+ + ++G N TY I + D A ++M E
Sbjct: 613 NSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMRE 672
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G D +I FCK + A ++ E + P + V +IS ++ ++
Sbjct: 673 KGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGF-RDLNNME 731
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
AL + + ++++I L + + A L +M+S+G P F+ ++
Sbjct: 732 AALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLV 791
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ G + A ++L+ M + + P V Y L++GY G ++EA + +E
Sbjct: 792 NGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLV 851
Query: 441 LSPVTYHTLIRG 452
VTY LI G
Sbjct: 852 PDDVTYDILING 863
>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 793
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 141/320 (44%), Gaps = 9/320 (2%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI + L + + A E+ GC ++ +YY + L + K + + EKM+
Sbjct: 309 NSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVW 368
Query: 261 TGSL-PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---D 316
+L PD +I K G A +A A++K + + + ++ S CQ+ D
Sbjct: 369 NSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMD 428
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
E L +DM + +++++ CR+ + AK +L +M G P +
Sbjct: 429 EAKSLVIDMYSRGCNPD----VVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSY 484
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
++++ +G A EM+ + P+ TY +M G G++ EAC++ E +
Sbjct: 485 TALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVE 544
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+PV + LI+ C+ ++ A K L E + G NV + +I C + D
Sbjct: 545 KGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFC-QIGDME 603
Query: 497 TAEKLLEDMRLKGLHLNGIT 516
A +L+DM L G H + +T
Sbjct: 604 AALSVLDDMYLSGKHPDAVT 623
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 128/276 (46%), Gaps = 4/276 (1%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
GC + TY ++ R D A + ++M + G P++ +++ C GK+ EA
Sbjct: 441 GCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEA 500
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
+ ++ E+ + P ++ + + + + A D+ + + + +I+
Sbjct: 501 REMINVS-EEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQ 559
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
SLC+ + V AK L + +++G F +VI + + GDM A+ +L M G P
Sbjct: 560 SLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHP 619
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
D TYT L G+++EA E++ + +PVTY ++I Y + D L LL
Sbjct: 620 DAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLL 679
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
+M + QP YN++I+ LC + AEKLL
Sbjct: 680 EKM--LKRQPFRTVYNQVIEKLC-DFGNLEEAEKLL 712
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 153/354 (43%), Gaps = 36/354 (10%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
E ++ +S+ GK + A V G + TI L + + A E+
Sbjct: 236 EAFGYVMVSYSRAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLER 295
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEA--------------------HVVYTLAREKK 297
M TG PD +I +C + ++A V+ L +EKK
Sbjct: 296 MQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKK 355
Query: 298 MYPPQSVVAFLI--SSLCQEDETVKLALDML------DD---FSGEARKYAIK----PFS 342
+ + ++ ++ S+L + T + ML DD F EA+ +S
Sbjct: 356 IEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYS 415
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+++ S C+ + AK+L+ M S G P + +++ + + G + A ++L+ M
Sbjct: 416 AIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKH 475
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G KP+ +YT L++G + G+ EA E++N ++++ + +TY ++ G + + A
Sbjct: 476 GCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEA 535
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
L EM + G P E N LIQSLC + A+K LE+ KG +N +
Sbjct: 536 CDLTREMVEKGFFPTPVEINLLIQSLC-QNQKVVEAKKYLEECLNKGCAINVVN 588
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 125/317 (39%), Gaps = 34/317 (10%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
F +LG+ A ++ + +GC N +Y + L A + E P+
Sbjct: 456 FCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPN 515
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
+ G ++ + GK EA + EK +P + LI SLCQ + V+ A L
Sbjct: 516 AITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVE-AKKYL 574
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
++ + + F++VI C++ D+ A ++L M G P + ++ A K
Sbjct: 575 EECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKK 634
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ----------------------- 423
G + A E++ M S+GL P TY ++ Y+ G+
Sbjct: 635 GRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKRQPFRTVYNQ 694
Query: 424 ----------MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
+EEA ++L + + S++ T H L+ Y K A K+ M
Sbjct: 695 VIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGVAISAYKVACRMFRRN 754
Query: 474 VQPNVDEYNKLIQSLCL 490
+ P++ K+ + L L
Sbjct: 755 LTPDLKLCEKVSKKLVL 771
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 90/191 (47%), Gaps = 8/191 (4%)
Query: 301 PQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP--FSSVIRSLCRMKDVHGAK 358
P V A L S Q DE V L D +Y+ P + +++ L + K GA+
Sbjct: 167 PPLVCAVLRS---QADERVALNFFYWAD---RQWRYSHHPVVYYTMLDVLSKTKLCQGAR 220
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+L M G F V+ +YS+AG + A+ +L LM+ G++P + +
Sbjct: 221 RVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVL 280
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
GG++E+A + L + + VTY++LI+GYC L + AL+L+ + G P+
Sbjct: 281 VKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDK 340
Query: 479 DEYNKLIQSLC 489
Y ++ LC
Sbjct: 341 VSYYTVMGFLC 351
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 137/309 (44%), Gaps = 12/309 (3%)
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
++N G N TY ++AL + D A + +M G PD +IS C
Sbjct: 166 LYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMC 225
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
K G +A + K P V LI +C+E K A D++++ +
Sbjct: 226 KLGDVDKAREL-----AMKFEPVVPVYNALIHGVCKECR-FKEAFDLMNEMVDRGVDPNV 279
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
+S+VI L M +V + + +M G P F S+I + G + A+ + L
Sbjct: 280 ISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNL 339
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M G+ P+V Y L+ G + G M+EA + N+ +K+ R + TY T+I G+ K +
Sbjct: 340 MIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGD 399
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG-----LHLN 513
A + N+M + G +PNV Y ++ LC ++ + A L+++M G + N
Sbjct: 400 LVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSM-FDQAFDLIDNMISDGCPPTVITFN 458
Query: 514 GITRALIRA 522
+ L RA
Sbjct: 459 NFIKGLCRA 467
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 149/350 (42%), Gaps = 15/350 (4%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGV-LTVEILNELIALFSKLGKGKAAFE 218
V +AL+ +C KE + D++ E+ ++GV V + +I+ S +G + +
Sbjct: 246 VYNALIHGVCKECRFKEAF---DLMNEM--VDRGVDPNVISYSTVISCLSDMGNVELSLA 300
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
VF + GC N +T+ I+ R A + MI G P+ +I C
Sbjct: 301 VFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLC 360
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
G EA V+ + + P + + +I + + V A + + + +
Sbjct: 361 SDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVS-ACETWNKMINCGCRPNV 419
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
++ ++ LC+M A L+ MIS+G PP FN+ I +AG + AM +L
Sbjct: 420 VVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQ 479
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M P++ TY L+ G EAC ++ E ++ VTY+T++ G+
Sbjct: 480 MEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGM 539
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLC--------LKALDWRTAEK 500
L+LL +M G++ + N + + C +K LD +AEK
Sbjct: 540 HQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEK 589
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 145/323 (44%), Gaps = 6/323 (1%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
V + N LI K + K AF++ N+ D G N +Y I LS + + +V
Sbjct: 243 VVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVF 302
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLC 313
+M G P+ + +I F G+ +A ++ L + + P +VVA+ LI LC
Sbjct: 303 GRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSP--NVVAYNTLIHGLC 360
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
D + A+ + + ++ + + +S++I + D+ A +KMI+ G P
Sbjct: 361 S-DGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNV 419
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
V+ ++ + A +++ M S G P V T+ + G G++E A +L++
Sbjct: 420 VVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQ 479
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
+K + TY+ L+ G + F A L+ E+++ V+ + YN ++ +
Sbjct: 480 MEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGM 539
Query: 494 DWRTAEKLLEDMRLKGLHLNGIT 516
+ + LL M + G+ L+ IT
Sbjct: 540 HQQVLQ-LLGKMLVNGIKLDTIT 561
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 68/155 (43%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
K+ + ++I L R ++ G LL +M E P +F VI Y ++ ++
Sbjct: 71 KHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLK 130
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
M +R G +P V Y ++ + + + N K + TY+ L++ C
Sbjct: 131 MFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALC 190
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + D A KLL EM + G P+ Y +I S+C
Sbjct: 191 QNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMC 225
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 157/335 (46%), Gaps = 2/335 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N I+ K + + A V K + G V N TY I+ + D A++ ++M+
Sbjct: 291 NSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMN 350
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G + +I + +EA + REK + P I+ C+ K
Sbjct: 351 RGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKK 410
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
AL + D+ + + ++ ++S+I + + A+ K I EG P +FN++I
Sbjct: 411 -ALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALI 469
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ G++ A ++LK M + + PD T+ LM GY ++EEA ++L+E K+ +
Sbjct: 470 DGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIK 529
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
++Y+TLI GY K + AL++ +EM +G P + YN LIQ K + AE+
Sbjct: 530 PDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYS-KIGEADHAEE 588
Query: 501 LLEDMRLKGLHLNGITRALIRAVKELEEDAIENGE 535
LL +M+ KG+ + T + + +D +EN +
Sbjct: 589 LLREMQSKGITPDDSTYLYVIEAMKTNDDLVENDD 623
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 120/246 (48%), Gaps = 6/246 (2%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
++S +C+ K EA L +E ++ P ++ + SL + +K+A + ++
Sbjct: 153 LLSAYCQFRKPDEALECLNLMKENEIIP-KTETCNSLLSLLLKLNKIKMAWFVYEEMVKM 211
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
K +I F+ +I LCR AK + M G P +N+VI+ Y G A
Sbjct: 212 NIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAA 271
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLI 450
++ K M+ + LKPD YTY +S ++EEA +L K S L P VTY+ LI
Sbjct: 272 SKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVL--CKLLESGLVPNAVTYNALI 329
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
G C + D A +EM + G+ +V YN LI +L L+ AE ++++MR KG+
Sbjct: 330 DGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEK-RIEEAEDMIKEMREKGV 388
Query: 511 HLNGIT 516
+ +T
Sbjct: 389 EPDVVT 394
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 122/293 (41%), Gaps = 1/293 (0%)
Query: 193 GVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAW 252
V T + + L++ + + K A E N + + ET + L + AW
Sbjct: 143 NVKTTLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAW 202
Query: 253 SVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSL 312
V E+M++ +I+ C+ GK K+A + P +I+
Sbjct: 203 FVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGY 262
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
C + + A + + K ++S I LC+ + + A +L K++ G P
Sbjct: 263 CLRGK-FEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPN 321
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+N++I GD+ A M +RG+ V+TY L+ ++EEA +++
Sbjct: 322 AVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIK 381
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
E ++ VTY+ I GYC+ AL L +EM + ++P V+ Y LI
Sbjct: 382 EMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLI 434
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 101/251 (40%), Gaps = 48/251 (19%)
Query: 165 LKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFG 224
+ C K+ +L+D E+ EK TVE LI +F K + A E F
Sbjct: 399 INGYCRCGNAKKALSLFD---EMVEKNIRP-TVETYTSLIDVFGKRNRMSEAEEKF---- 450
Query: 225 DYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAK 284
+K I+ G LPD +I C G
Sbjct: 451 -------------------------------KKSIKEGMLPDIIMFNALIDGHCVNGNID 479
Query: 285 EAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP---- 340
A + K+ P + L+ C+E + V+ A +LD E ++ IKP
Sbjct: 480 RAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERK-VEEAKKLLD----EMKERGIKPDHIS 534
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++++I + D+ A + +M+S G P +N++I YSK G+ A E+L+ M+
Sbjct: 535 YNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQ 594
Query: 401 SRGLKPDVYTY 411
S+G+ PD TY
Sbjct: 595 SKGITPDDSTY 605
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 1/136 (0%)
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
VF+ ++SAY + A+E L LM+ + P T L+S +++ A + E
Sbjct: 149 VFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEM 208
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
K + + S VT++ +I C+ ++ A + M+ GV+PNV YN +I CL+
Sbjct: 209 VKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRG-K 267
Query: 495 WRTAEKLLEDMRLKGL 510
+ A K+ + M+ K L
Sbjct: 268 FEAASKIFKTMKDKNL 283
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 6/128 (4%)
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
EM+K+ +K + T+ +++ G+ ++A + + + + + VTY+T+I GY
Sbjct: 207 EMVKM----NIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGY 262
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
C +F+ A K+ MKD ++P+ YN I LC K A +L + GL N
Sbjct: 263 CLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLC-KERRIEEASGVLCKLLESGLVPN 321
Query: 514 GIT-RALI 520
+T ALI
Sbjct: 322 AVTYNALI 329
>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 732
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 147/316 (46%), Gaps = 6/316 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I +K G+ + AF + + G VAN TY I A ++ ++ A ++ +M E G
Sbjct: 297 VIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENG 356
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM--YPPQSVVAFLISSLCQEDETVK 320
PD IS K G+ +EA L RE M P ++ ++ S C + +
Sbjct: 357 VAPDVITYSSTISACAKKGQWEEA---VGLLREMPMEGVTPNAISYGIVISACAKRGRWR 413
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A+D+L + + +S+ I + + A LL +M + G P +NS I
Sbjct: 414 EAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAI 473
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
A +K G A+E+L+ M + GL PDV TY+ +++ A G Q EEA ++ E ++
Sbjct: 474 DACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGIT 533
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
V+ +T I + ++ AL +L EM +G+ P+ Y I + C K W+
Sbjct: 534 PDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDA-CAKGDRWKEIID 592
Query: 501 LLEDMRLKGLHLNGIT 516
LL +M GL + I+
Sbjct: 593 LLREMSTVGLTPDAIS 608
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 125/268 (46%), Gaps = 4/268 (1%)
Query: 245 RKIFDW--AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQ 302
++ DW A V ++M E G PDS+ I+ C + E V + + PP
Sbjct: 162 KQYGDWRKALDVLDRMQEQGVKPDSQNYSSAIA-ACGNARQWERAVELLASMAARGTPPD 220
Query: 303 SVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLS 362
+ + C + K A+ +L G+ K + +S+ I + + A LL
Sbjct: 221 VLTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLK 280
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG 422
+M + G P +++VI A +K G PA +L M ++G+ ++ TY+ ++ A G
Sbjct: 281 EMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWG 340
Query: 423 QMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
Q EEA +L E ++N +TY + I K +++ A+ LL EM GV PN Y
Sbjct: 341 QWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYG 400
Query: 483 KLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+I S C K WR A LL++M+ G+
Sbjct: 401 IVI-SACAKRGRWREAIDLLQEMQAHGV 427
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 140/308 (45%), Gaps = 2/308 (0%)
Query: 209 KLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSE 268
+ G + A +V ++ + G + + Y I A + ++ A + M G+ PD
Sbjct: 163 QYGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVL 222
Query: 269 KVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDD 328
I+ K + KEA + + + + P V + IS+ C++ + A+D+L +
Sbjct: 223 TYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISA-CRKGGQWETAVDLLKE 281
Query: 329 FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD 388
+ +S+VI + + A LL +M ++G ++ VI A +K G
Sbjct: 282 MPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQ 341
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHT 448
A+ +L+ M+ G+ PDV TY+ +S A GQ EEA +L E + ++Y
Sbjct: 342 WEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGI 401
Query: 449 LIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLK 508
+I K + A+ LL EM+ GV P+V Y+ I + C +A W A LL +M
Sbjct: 402 VISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDA-CAQASRWEQALWLLREMPAT 460
Query: 509 GLHLNGIT 516
GL N I+
Sbjct: 461 GLTPNVIS 468
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 1/208 (0%)
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
C + A+++L + + +SS I + ++ A LL M +G P
Sbjct: 196 CGNARQWERAVELLASMAARGTPPDVLTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPN 255
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
V+++ ISA K G A+++LK M + GL PDV TY+ ++ A GQ E A +L
Sbjct: 256 VIVYSAAISACRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLM 315
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
E + +TY +I K +++ A+ LL EM++ GV P+V Y+ I S C K
Sbjct: 316 EMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTI-SACAKK 374
Query: 493 LDWRTAEKLLEDMRLKGLHLNGITRALI 520
W A LL +M ++G+ N I+ ++
Sbjct: 375 GQWEEAVGLLREMPMEGVTPNAISYGIV 402
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 93/193 (48%), Gaps = 1/193 (0%)
Query: 328 DFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG 387
D G + + +R + D A +L +M +G P + ++S I+A A
Sbjct: 141 DKGGRQAGMPMSHLKATLREAKQYGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNAR 200
Query: 388 DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYH 447
A+E+L M +RG PDV TY+ ++ A + +EA +L K + + + Y
Sbjct: 201 QWERAVELLASMAARGTPPDVLTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYS 260
Query: 448 TLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRL 507
I K +++ A+ LL EM VG+ P+V Y+ +I + C K W A +LL +M
Sbjct: 261 AAISACRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDA-CAKRGQWEPAFRLLMEMPT 319
Query: 508 KGLHLNGITRALI 520
KG+ N IT +++
Sbjct: 320 KGVVANIITYSIV 332
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 137/318 (43%), Gaps = 10/318 (3%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I+ +K G+ + A ++ + +G + Y I+A ++ ++ A + +M TG
Sbjct: 402 VISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATG 461
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY--PPQSVVAFLISSLCQEDETVK 320
P+ I K G++K + L RE + P + + + C +
Sbjct: 462 LTPNVISYNSAIDACAKTGRSK---IAVELLREMPAHGLAPDVITYSAVIASCAMGRQWE 518
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
ALD+ + + + ++ I + + A +L +M + G P + + I
Sbjct: 519 EALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAI 578
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
A +K +++L+ M + GL PD +Y MS + G +EA +L +
Sbjct: 579 DACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVG-- 636
Query: 441 LSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
LSP VTY++ I K + A LL +M G+ P+V+ +N I + C W TA
Sbjct: 637 LSPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDA-CGNGDQWGTA 695
Query: 499 EKLLEDMRLKGLHLNGIT 516
++L +MR G+ N T
Sbjct: 696 VEVLFEMRALGVSPNEAT 713
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 103/254 (40%), Gaps = 9/254 (3%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N I +K G+ K A E+ + +G + TY I + + + ++ A + +M
Sbjct: 470 NSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQR 529
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD I+ +GG +EA V + P I + C + + K
Sbjct: 530 QGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDA-CAKGDRWK 588
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHG----AKTLLSKMISEGPPPGNAVF 376
+D+L + S + P + R V G A LL M++ G P +
Sbjct: 589 EIIDLLREMS----TVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTY 644
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
NS I+A +K G A +L+ M + GL PDV ++ + NG Q A E+L E +
Sbjct: 645 NSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVLFEMRA 704
Query: 437 NHSRLSPVTYHTLI 450
+ TY T +
Sbjct: 705 LGVSPNEATYLTAM 718
>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
Length = 702
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 162/348 (46%), Gaps = 23/348 (6%)
Query: 167 AICSSVGKKEVYALWDIVKEI--GEKEKGV-LTVEILNELIALFSKLGKGKAAFEVFNKF 223
A+C G + D V + G K GV L+ + N LI+ + + G AF+++++
Sbjct: 343 AVCGKRGME------DYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEM 396
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
G TY + LSR+ + A S+ KM++ G P+ + ++ + KGG A
Sbjct: 397 ISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNA 456
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISS--LCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ ++P ++ L+ + C+ E V+ A E + KP
Sbjct: 457 AGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQ-------EVKAQGYKPD 509
Query: 342 SSVIRSLCRMKDVHG----AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+ S+ M +G A + + G P +NS++ Y+K+ + A ++LK
Sbjct: 510 LVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILK 569
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
++S +KPDV +Y +++G+ G ++EA IL+E + VTYHTL+ GY LE
Sbjct: 570 QLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLE 629
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
F+ A +++N M ++P Y +++ S C KA + A + L ++
Sbjct: 630 MFNEAREVVNYMIHHNLKPMELTYRRVVDSYC-KAKRYDEAREFLSEI 676
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 121/279 (43%), Gaps = 1/279 (0%)
Query: 235 YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR 294
Y + ALSR ++ A + ++ G +P ++ + + G++ V
Sbjct: 92 YTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEM 151
Query: 295 EKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDV 354
P A + + C D + A+ +D + ++++++ + +
Sbjct: 152 RAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNY 211
Query: 355 HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
A +L +M G P +N + Y++AG A + L M S+GL P+ +TY +
Sbjct: 212 TEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTV 271
Query: 415 MSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV 474
M+ YAN G+++EA + + KKN + TY+ + K F L++L EM G
Sbjct: 272 MTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGC 331
Query: 475 QPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
PN +N ++ ++C K ++L M+ G+ L+
Sbjct: 332 TPNRVTWNTML-AVCGKRGMEDYVTRVLNGMKSCGVELS 369
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 131/333 (39%), Gaps = 4/333 (1%)
Query: 190 KEKGVL-TVEILNELIALFSKLGKG-KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKI 247
+ +GV+ T+ N ++ ++ ++G+ + + G + T I A R +
Sbjct: 116 RRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGL 175
Query: 248 FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF 307
D A + E + G +P ++ F K G EA V E P +V
Sbjct: 176 LDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLK-EMEDSGCQPDAVTYN 234
Query: 308 LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
++ + A LD + + +++V+ + + V A L +M
Sbjct: 235 ELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKN 294
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P +N + K T +EML+ M G P+ T+ +++ G +
Sbjct: 295 GYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYV 354
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
+LN K LS TY+TLI Y + A K+ +EM G P + YN L+
Sbjct: 355 TRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNV 414
Query: 488 LCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
L + DW TA+ ++ M G N + +L+
Sbjct: 415 LSRQG-DWSTAQSIVSKMLKNGFKPNDQSYSLL 446
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 117/299 (39%), Gaps = 39/299 (13%)
Query: 190 KEKG-VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
K +G V V N L+ +F K G A V + D GC + TY +R F
Sbjct: 187 KARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFF 246
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
+ A + M G LP++ +++ + G+ EA ++ + K Y P L
Sbjct: 247 EEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMK-KNGYVPNVNTYNL 305
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT-LLSKMISE 367
I + + L+ML++ S +++++ ++C + + T +L+ M S
Sbjct: 306 IFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTML-AVCGKRGMEDYVTRVLNGMKSC 364
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G +N++ISAY + G T A +M M S G P + TY L++ + G A
Sbjct: 365 GVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTA 424
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
I+++ KN G +PN Y+ L+Q
Sbjct: 425 QSIVSKMLKN-----------------------------------GFKPNDQSYSLLLQ 448
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 79/188 (42%), Gaps = 1/188 (0%)
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
G PD +++ + K G +A ++ ++ + P L+ + +E+ +
Sbjct: 505 GYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWE- 563
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A +L K + +++VI C+ + A+ +LS+MI++G P +++++
Sbjct: 564 AEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVG 623
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
Y+ A E++ M LKP TY ++ Y + +EA E L+E
Sbjct: 624 GYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEISDTDQNF 683
Query: 442 SPVTYHTL 449
H L
Sbjct: 684 DQKLQHML 691
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Query: 422 GQMEEACEILNEAK-KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
GQ + C++L+E SRL Y T++ + ++ AL+L E++ GV P +
Sbjct: 67 GQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVT 126
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRA 522
YN ++ W LLE+MR G+ + T + + A
Sbjct: 127 YNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIA 168
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 156/332 (46%), Gaps = 13/332 (3%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
++LL ++C + K+V+ + I + + V V + LI F K+ + A +++
Sbjct: 450 NSLLNSLCKA---KKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYK 506
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ D CV N TY + L R+ A V E+M+ G PD +I F
Sbjct: 507 QMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLAR 566
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAI 338
K +AH ++ + P L+ LC+E DE +L M++ R
Sbjct: 567 KHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDR---- 622
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
+++++ C + + A + +M+S+G P +N ++ + +AG A ++ ++
Sbjct: 623 VTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQV 682
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKL 456
M SR KPD ++ ++ G + ++++A E+ +++H SP VTY++LI G C
Sbjct: 683 MVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHG-CSPDLVTYNSLIFGLCGE 741
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ A+K+ E+ + + P+ +N L++++
Sbjct: 742 QRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAI 773
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 118/260 (45%), Gaps = 6/260 (2%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
T + I+ L + D A S+ E MI+ G PD +I+ CK K +EA
Sbjct: 376 TCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM 435
Query: 294 REKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYA--IKPFSSVIRSLC 349
K S ++ L++SLC+ + V A + E R + + +S +I C
Sbjct: 436 DRKISSRSSSCFSYNSLLNSLCKA-KKVHQAFAIFSTMVSE-RSFVPDVVSYSILIDGFC 493
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
++ ++ A+ L +MI P +N+ ++ + G + A + + M + G PDV
Sbjct: 494 KIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVI 553
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
TY+ L+ G++ + ++A E+ R + VTY+ L+ G CK + D A +L +M
Sbjct: 554 TYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKM 613
Query: 470 KDVGVQPNVDEYNKLIQSLC 489
+ G P+ Y L+ C
Sbjct: 614 VERGCDPDRVTYTTLLYGFC 633
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 136/322 (42%), Gaps = 15/322 (4%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSV-CEKMIET 261
L+ F K A ++F GC + Y + + A + + D A+ + E +E+
Sbjct: 240 LLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVES 299
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
+ ++ +S CK GK ++A +E + Q V LI L +
Sbjct: 300 KAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQES-LSSSQPVYDMLIRLLIESGR---- 354
Query: 322 ALDMLDDFSGEARKYAIKPFS----SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
+D ++ E I+P S SVI+ LC+ V A +LL MI G P A +
Sbjct: 355 -IDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHS 413
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSR--GLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+I+ KA + A E L+ M + ++Y L++ ++ +A I +
Sbjct: 414 MLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMV 473
Query: 436 KNHSRLSPV-TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
S + V +Y LI G+CK++E A KL +M D+ PNV YN + L K
Sbjct: 474 SERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKG-R 532
Query: 495 WRTAEKLLEDMRLKGLHLNGIT 516
A+ + E+M G + IT
Sbjct: 533 IADAQGVYEEMVAAGCSPDVIT 554
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 130/303 (42%), Gaps = 18/303 (5%)
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
K A +VF K G V N TY +++ + D A +M++ G P S K+
Sbjct: 146 KQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKV 205
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV---KLALDMLDDFS 330
GK E V+ EK++ + L+ + +D+ + KL M+
Sbjct: 206 TECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMV---- 261
Query: 331 GEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPP-GNAVFNSVISAYSK 385
K KP +S ++ + C+++++ A L +M E P N + + +S K
Sbjct: 262 ----KSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCK 317
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
+G + A E + M+ L Y L+ G++++A E E + + S T
Sbjct: 318 SGKIEQAFEACRTMQE-SLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGT 376
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
H++I+ CK D AL LL M G P++ ++ LI LC KA + A++ L+ M
Sbjct: 377 CHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELC-KADKIQEAQEFLQGM 435
Query: 506 RLK 508
K
Sbjct: 436 DRK 438
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 120/313 (38%), Gaps = 45/313 (14%)
Query: 209 KLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSE 268
K GK + AFE + ++Q Y I L D A C ++ P S
Sbjct: 317 KSGKIEQAFEACRTMQE-SLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSG 375
Query: 269 KVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDD 328
+I CK G+ A + ++ P + + LI+ LC+ D+ ++ A + L
Sbjct: 376 TCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADK-IQEAQEFL-- 432
Query: 329 FSGEARKYAIKP-----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAY 383
G RK + + ++S++ SLC+ K VH A + S M+SE
Sbjct: 433 -QGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSE---------------- 475
Query: 384 SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
R PDV +Y+ L+ G+ ++ A ++ + + +
Sbjct: 476 ------------------RSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNV 517
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
TY+ + G + A + EM G P+V Y+ LI L A A +L E
Sbjct: 518 TTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSL-ARKHDQAHELFE 576
Query: 504 DMRLKGLHLNGIT 516
M +G N +T
Sbjct: 577 TMISRGCRPNAVT 589
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/283 (19%), Positives = 99/283 (34%), Gaps = 46/283 (16%)
Query: 184 VKEIGEKEK---------GVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQET 234
+ E+G EK V V N + + G+ A V+ + GC + T
Sbjct: 495 IDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVIT 554
Query: 235 YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR 294
Y I S + D A + E MI G P++ ++ CK K EAH ++
Sbjct: 555 YSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMV 614
Query: 295 EKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDV 354
E+ P + L+ C + ++ A+++ D+ + + ++ +++ R
Sbjct: 615 ERGCDPDRVTYTTLLYGFCNVGK-IEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKP 673
Query: 355 HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM-RSRG---------- 403
AK L M+S P N +I SKA + A+E+ + M + G
Sbjct: 674 GEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNS 733
Query: 404 -------------------------LKPDVYTYTGLMSGYANG 421
L PD + + L+ G
Sbjct: 734 LIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAIKCG 776
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 388 DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYH 447
D A+ + +++R K DV+TY L+ +++A ++ + + TY
Sbjct: 109 DGGEALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYA 168
Query: 448 TLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
L++ C D A++ EM D G +P+ Y K+ + CLKA
Sbjct: 169 VLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTE--CLKA 211
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 155/347 (44%), Gaps = 8/347 (2%)
Query: 164 LLKAICSSVG-KKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L+A C G + V L D+ L V N ++ G A +
Sbjct: 163 ILEAACRGGGFRSAVRVLEDL-----HARGCALDVGNCNLVLNAICDQGSVDEALHLLRD 217
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+GC + +Y ++ L K + + E+M+ P+ +IS+ C+ G
Sbjct: 218 LPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGL 277
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+ H V E P + A +I +C+E +++A ++L+ K + ++
Sbjct: 278 FERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGH-LEVAHEILNRMPSYGLKPNVVCYN 336
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
++++ LC + + LL++M + P + FN ++ + + G + +E+L+ M R
Sbjct: 337 TLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLER 396
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G PDV TYT +++G+ G ++EA +L + + ++Y +++G C E + A
Sbjct: 397 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDA 456
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
L+++M G N +N LI LC K L + E LL+ M + G
Sbjct: 457 EDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIE-LLKQMLVNG 502
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 131/292 (44%), Gaps = 2/292 (0%)
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
E+ + D C + T+ ++ + + D + E+M+E G +PD +I+ F
Sbjct: 353 ELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGF 412
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
CK G EA ++ P ++ LC + V A D++ +
Sbjct: 413 CKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVD-AEDLMSQMIQQGCPLN 471
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
F+++I LC+ V A LL +M+ G P +++VI KAG A+E+L
Sbjct: 472 PITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLN 531
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
+M ++G+ P+ Y+ + S + G++ + ++ + + R V Y+ +I CK
Sbjct: 532 VMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRG 591
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
E + A++ L M G PN Y LI+ L + + A+++L ++ KG
Sbjct: 592 ETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGF-VKEAQEMLTELCSKG 642
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 143/362 (39%), Gaps = 44/362 (12%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ A V ++ GC Y+ +EA R F A V E + G D
Sbjct: 136 GRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNC 195
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDD 328
+++ C G EA ++ L VV++ ++ LC +++++
Sbjct: 196 NLVLNAICDQGSVDEA--LHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRW-GCVQELMEE 252
Query: 329 FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD 388
A I F+++I LCR +L++M+ G P ++ ++I K G
Sbjct: 253 MVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGH 312
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV---- 444
+ A E+L M S GLKP+V Y L+ G + + EE E+L E L V
Sbjct: 313 LEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNI 372
Query: 445 -------------------------------TYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
TY T+I G+CK D A+ LL M G
Sbjct: 373 LVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACG 432
Query: 474 VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAV--KELEEDA 530
+PN Y +++ LC A W AE L+ M +G LN IT LI + K L E A
Sbjct: 433 CKPNTISYTIVLKGLC-SAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQA 491
Query: 531 IE 532
IE
Sbjct: 492 IE 493
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 133/308 (43%), Gaps = 7/308 (2%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+ + +I K G + A E+ N+ YG N Y ++ L + ++ +
Sbjct: 297 IRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLA 356
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE- 315
+M + D ++ +FC+ G + E+ P +I+ C+E
Sbjct: 357 EMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEG 416
Query: 316 --DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
DE V L L + K ++ V++ LC + A+ L+S+MI +G P
Sbjct: 417 LIDEAVML----LKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNP 472
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
FN++I+ K G + A+E+LK M G PD+ +Y+ ++ G G+ +EA E+LN
Sbjct: 473 ITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNV 532
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
+ + Y ++ + + +++ + ++D ++ + YN +I SLC +
Sbjct: 533 MVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGE 592
Query: 494 DWRTAEKL 501
R E L
Sbjct: 593 TERAIEFL 600
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 87/185 (47%), Gaps = 8/185 (4%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+ V+R+LC + A +L +M G P +++ ++ A + G A+ +L+ +
Sbjct: 125 YFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLH 184
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+RG DV +++ + G ++EA +L + V+Y+ +++G C + +
Sbjct: 185 ARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWG 244
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE--------DMRLKGLHL 512
C +L+ EM + PN+ +N LI LC L R E L + D+R+ +
Sbjct: 245 CVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATII 304
Query: 513 NGITR 517
+GI +
Sbjct: 305 DGICK 309
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 6/166 (3%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA-VFNSVISAYSKAGDMTPAMEMLKLM 399
+++++ CR + A+ L + + P P NA + V+ A G + A+ +L M
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAV----PVPPNAYTYFPVVRALCARGRIADALAVLDEM 148
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
RG P Y ++ GG A +L + L + ++ C
Sbjct: 149 PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSV 208
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
D AL LL ++ G +P+V YN +++ LC+ A W ++L+E+M
Sbjct: 209 DEALHLLRDLPSFGCEPDVVSYNAVLKGLCM-AKRWGCVQELMEEM 253
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 112/258 (43%), Gaps = 4/258 (1%)
Query: 179 ALWDIVKEIGEK--EKGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETY 235
L D V E+ E+ E+G + V +I F K G A + GC N +Y
Sbjct: 381 GLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISY 440
Query: 236 YFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE 295
++ L + + A + +MI+ G + +I++ CK G ++A +
Sbjct: 441 TIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLV 500
Query: 296 KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVH 355
P + +I L + +T + AL++L+ + +SS+ +L R ++
Sbjct: 501 NGCSPDLISYSTVIDGLGKAGKTDE-ALELLNVMVNKGMSPNTIIYSSIASALSREGRIN 559
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
+ + ++N+VIS+ K G+ A+E L M S G P+ TYT L+
Sbjct: 560 KVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILI 619
Query: 416 SGYANGGQMEEACEILNE 433
G A+ G ++EA E+L E
Sbjct: 620 RGLASEGFVKEAQEMLTE 637
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 71/169 (42%), Gaps = 1/169 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N LI K G + A E+ + GC + +Y I+ L + D A + M+
Sbjct: 475 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMV 534
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
G P++ I S + G+ + ++ ++ + + +ISSLC+ ET
Sbjct: 535 NKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETE 594
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
+ A++ L ++ +IR L V A+ +L+++ S+G
Sbjct: 595 R-AIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642
>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
Length = 822
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 125/262 (47%), Gaps = 9/262 (3%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
NQ +Y I R A + +M+ G PD G +I GK EA +V
Sbjct: 378 NQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVR 437
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIR 346
E++++P ++ LIS LC++ + A ++L+ E + ++P ++++I
Sbjct: 438 EKMTERQVFPDVNIYNVLISGLCKK-HMLPAAKNILE----EMLEKNVQPDEFVYATLID 492
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
R +++ A+ + M +G P N++I Y + G M+ A+ + MR G P
Sbjct: 493 GFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIP 552
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
D +TYT ++SGYA G + A L + K + + VTY +LI GYCK + D A L
Sbjct: 553 DEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLF 612
Query: 467 NEMKDVGVQPNVDEYNKLIQSL 488
M+ + PNV Y LI SL
Sbjct: 613 ANMQAEALSPNVVTYTILIGSL 634
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 151/347 (43%), Gaps = 11/347 (3%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGD-YGCVANQETYYFTIEALSRRKIFDWAWSV 254
T L L+A ++ G A ++ + + YG + ++ L ++ +D A +
Sbjct: 132 TRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLVEQRRWDDARKL 191
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
++M+ S D+ ++ C G+ +E + P LI C+
Sbjct: 192 YDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCR 251
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
+ + L +L + + + + S+I L + D+ +L +M G P
Sbjct: 252 RGDMGR-GLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQ 310
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
++NSVI A K T AM +LK M + G PD+ T+ L++G + G + +A L EA
Sbjct: 311 IYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREA 370
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL---- 490
+ + ++Y LI G+C E A LL EM G P+V + LI L +
Sbjct: 371 IRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKV 430
Query: 491 -KALDWR---TAEKLLEDMRLKGLHLNGITRA-LIRAVKELEEDAIE 532
+AL R T ++ D+ + + ++G+ + ++ A K + E+ +E
Sbjct: 431 SEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLE 477
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 120/326 (36%), Gaps = 27/326 (8%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
GK A V K + + Y I L ++ + A ++ E+M+E PD
Sbjct: 428 GKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVY 487
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
+I F + +A ++ K + P +I CQ + L M
Sbjct: 488 ATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCM----- 542
Query: 331 GEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
RK P +++VI + +++GA L MI P ++S+I+ Y K
Sbjct: 543 SNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKT 602
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
GD A + M++ L P+V TYT L+ ++ A NH + VT
Sbjct: 603 GDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTL 662
Query: 447 HTLIRGY------------CKLEEFDCALKLLNEMK----DVGVQPNVDEYNKLIQSLCL 490
H L+ G C E LL K D+G P YN +I SLC
Sbjct: 663 HYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIG-DPRNSAYNAIIFSLCR 721
Query: 491 KALDWRTAEKLLEDMRLKGLHLNGIT 516
+ R A M KG N IT
Sbjct: 722 HNM-LREALDFKNRMAKKGYVPNPIT 746
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/270 (19%), Positives = 103/270 (38%), Gaps = 49/270 (18%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I + + G A + GC+ ++ TY I +++ + A MI+
Sbjct: 523 NAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIK 582
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
P+ +I+ +CK G A ++ + + + P LI SL ++D+ ++
Sbjct: 583 RKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLR 642
Query: 321 LAL---DMLDDFSGE---ARKYAIKPFSS----VIRSLC-RMKDVHGAKTLL---SKMIS 366
L ML + Y + +S VI S+C +VHG LL K++
Sbjct: 643 AGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVF 702
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
+ P N+ +N++I + + + A++ M +G P+
Sbjct: 703 DIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPN------------------- 743
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
P+T+ +L+ G+C +
Sbjct: 744 ----------------PITFLSLLYGFCSV 757
>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 140/319 (43%), Gaps = 21/319 (6%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
L+ F K+G + A F++ GC N TY I A + + A + E M+ G
Sbjct: 163 LLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNG 222
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+P+ +I CK G+ ++A +Y + K+ P + F I
Sbjct: 223 CVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRI------------- 269
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
E ++ + + +++ LC+ V A+ LL M EG P +++++I
Sbjct: 270 ------VDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDG 323
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ K G + A E+ M G P+VYTY+ L+ +++ A ++L + +N +
Sbjct: 324 FCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPN 383
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
V Y ++ G CK+ + D A +L+ M++ G PNV Y +I R E LL
Sbjct: 384 VVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLE-LL 442
Query: 503 EDMRLKGLHLNGIT-RALI 520
+ M KG N IT R LI
Sbjct: 443 QLMTSKGCAPNFITYRVLI 461
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 115/287 (40%), Gaps = 53/287 (18%)
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
+N+ + G V N+ L F+ A++V +M+ G +PDS K+I + C
Sbjct: 75 YNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCN 134
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
K ++A ++ + + P +
Sbjct: 135 ASKVEKAFQLFQEMKRNGITPD------------------------------------VY 158
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
+++++ C++ + A+ +M +G P + ++I AY K ++ A E+ ++M
Sbjct: 159 TYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMM 218
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL-----------------S 442
S G P++ TYT L+ G+ G+ E+AC+I K + + +
Sbjct: 219 LSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPN 278
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
VTY L+ G CK + A LL M G +PN Y+ LI C
Sbjct: 279 VVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFC 325
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 125/275 (45%), Gaps = 4/275 (1%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
N TY ++ L + A + E M G P+ +I FCK GK EA V+
Sbjct: 278 NVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVF 337
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
T P + LI L +D+ + LAL +L + + ++ ++ LC+
Sbjct: 338 TKMLGHGCSPNVYTYSSLIDKL-FKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCK 396
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ A L+ M +G P + ++I + KAG + +E+L+LM S+G P+ T
Sbjct: 397 VGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFIT 456
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
Y L++ G +++A ++L E K+ + Y +I G+ EF +L LL E+
Sbjct: 457 YRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFS--HEFVASLGLLAELS 514
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
+ G P + Y LI + +KA A +L E++
Sbjct: 515 EDGSVPILPVYKLLIDNF-IKAGRLEMALELHEEL 548
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 101/242 (41%), Gaps = 15/242 (6%)
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM----YPPQSVV-AFLISSL 312
MI G P ++ +C+ G Y KKM Y P VV LI +
Sbjct: 2 MITEGCYPSPMIFNSLVHAYCRSGD-----YFYAYKLLKKMVICGYQPGYVVYNILIGGI 56
Query: 313 CQED-----ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
C + E + LA ++ + R LC + A ++ +M+S+
Sbjct: 57 CSTEDLPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSK 116
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P ++ ++ VI A + A ++ + M+ G+ PDVYTYT L+ + G +E+A
Sbjct: 117 GFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQA 176
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
+E +++ + VTY LI Y K + A ++ M G PN+ Y LI
Sbjct: 177 RNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDG 236
Query: 488 LC 489
C
Sbjct: 237 HC 238
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 124/342 (36%), Gaps = 75/342 (21%)
Query: 156 VTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKA 215
VT G AL+ +C + KE L + + G + + I + LI F K+GK
Sbjct: 280 VTYG---ALVDGLCKAHKVKEARDLLETMSLEGCEPNQI----IYDALIDGFCKVGKLDE 332
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A EVF K +GC N TY I+ L + K D A V KM+E P+ +++
Sbjct: 333 AQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVD 392
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
CK GK EA+ + + EK YP +I + V L++L + +
Sbjct: 393 GLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGR-VDRCLELLQLMTSKGCA 451
Query: 336 YAIKPFSSVIRSLC-------------RMKDVHGAKT--------------------LLS 362
+ +I C MK + K LL+
Sbjct: 452 PNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHEFVASLGLLA 511
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM--------------------------- 395
++ +G P V+ +I + KAG + A+E+
Sbjct: 512 ELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQNTYVSLIESLTLACK 571
Query: 396 ----LKL---MRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
KL M RG P++ L+ G G+ EEA ++
Sbjct: 572 VDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQL 613
>gi|224080562|ref|XP_002306163.1| predicted protein [Populus trichocarpa]
gi|222849127|gb|EEE86674.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 158/341 (46%), Gaps = 14/341 (4%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
T+ N L+++ + AFEV G A+ + Y I ++ D + V
Sbjct: 41 TLSTFNMLMSVCATSQNSAGAFEVLQLAKAVGLKADCKLYTTLISTCAKSGKVDAMFEVF 100
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+M+ G P+ G +I + G+ +A Y + R K + P + V LI++ C +
Sbjct: 101 HEMVNAGVEPNVHTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALITA-CGQ 159
Query: 316 DETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAK---TLLSKMISEG 368
V A D+L + +GEA+ I P ++I++ V A+ ++ K +G
Sbjct: 160 SGAVDRAFDVLAEMTGEAQP--IDPDHITVGALIKACTNAGQVDRAQEVYNMVHKYNIKG 217
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P V+ I++ S+ GD A ++ M +G+ PD + L+ + G+M+ A
Sbjct: 218 TPE---VYTIAINSCSQIGDWEFACKVFDDMTRKGVVPDEMFLSALIDVAGHAGKMDAAF 274
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
EI+ EAK ++L + Y +L+ C + + L+L ++K + ++P V N LI +L
Sbjct: 275 EIIQEAKAKGAQLGIIPYSSLMGACCNAKNWQKGLELYEDIKSMKIKPTVATMNALITAL 334
Query: 489 CLKALDWRTAEKLLEDMRLKGLHLNGITRALIRAVKELEED 529
C A ++L +M+ GL N IT +++ E ++D
Sbjct: 335 C-DGDQLPKALEVLSEMKAWGLRPNTITYSILSVASERKDD 374
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 131/348 (37%), Gaps = 80/348 (22%)
Query: 164 LLKAIC-SSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L ++C +S + + + K +G K ++ LI+ +K GK A FEVF++
Sbjct: 47 MLMSVCATSQNSAGAFEVLQLAKAVGLKAD----CKLYTTLISTCAKSGKVDAMFEVFHE 102
Query: 223 FGDYGCVANQETYYFTIEALSR----------------------RKIF------------ 248
+ G N TY I+ +R R +F
Sbjct: 103 MVNAGVEPNVHTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGA 162
Query: 249 -DWAWSVCEKMIETGSL----PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS 303
D A+ V +M TG PD VG +I G+ A VY + + +
Sbjct: 163 VDRAFDVLAEM--TGEAQPIDPDHITVGALIKACTNAGQVDRAQEVYNMVHKYNIKGTPE 220
Query: 304 VVAFLISSLCQ-----------EDETVK------LALDMLDDFSGEARKY---------- 336
V I+S Q +D T K + L L D +G A K
Sbjct: 221 VYTIAINSCSQIGDWEFACKVFDDMTRKGVVPDEMFLSALIDVAGHAGKMDAAFEIIQEA 280
Query: 337 -------AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
I P+SS++ + C K+ L + S P A N++I+A +
Sbjct: 281 KAKGAQLGIIPYSSLMGACCNAKNWQKGLELYEDIKSMKIKPTVATMNALITALCDGDQL 340
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
A+E+L M++ GL+P+ TY+ L +E +L++AKK+
Sbjct: 341 PKALEVLSEMKAWGLRPNTITYSILSVASERKDDLEAGLMLLSQAKKD 388
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 3/140 (2%)
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
LCR + K++ P + FN ++S + + + A E+L+L ++ GLK D
Sbjct: 20 LCRSQKAVKEAFRFCKLVQN---PTLSTFNMLMSVCATSQNSAGAFEVLQLAKAVGLKAD 76
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
YT L+S A G+++ E+ +E + TY LI G + + A
Sbjct: 77 CKLYTTLISTCAKSGKVDAMFEVFHEMVNAGVEPNVHTYGALIDGCARAGQVAKAFGAYG 136
Query: 468 EMKDVGVQPNVDEYNKLIQS 487
M+ V+P+ +N LI +
Sbjct: 137 IMRSKNVKPDRVVFNALITA 156
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
P + T+ LMS A A E+L AK + Y TLI K + D ++
Sbjct: 40 PTLSTFNMLMSVCATSQNSAGAFEVLQLAKAVGLKADCKLYTTLISTCAKSGKVDAMFEV 99
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKA 492
+EM + GV+PNV Y LI C +A
Sbjct: 100 FHEMVNAGVEPNVHTYGALIDG-CARA 125
>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 137/327 (41%), Gaps = 37/327 (11%)
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+F++ D G ANQ Y I ++ + + +KM G LP+ +I+ +C
Sbjct: 164 MFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYC 223
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
+ GK A V+ ++ + LI LC++ + K A +L+
Sbjct: 224 RDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSK-AEGLLERMKRAHINPTT 282
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG----------- 387
+ F+ ++ LC + A + L K+ G P +N +IS +SK G
Sbjct: 283 RTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVRE 342
Query: 388 ------------------------DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
D+ A EM LM+ GL PD +TY L+ G G
Sbjct: 343 MEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGN 402
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
M EA ++ + H + + V Y+T+I GYCK ALK L EM GV PNV Y
Sbjct: 403 MVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYIS 462
Query: 484 LIQSLCLKALDWRTAEKLLEDMRLKGL 510
IQ LC K A++LL++M GL
Sbjct: 463 TIQILC-KDGKSIEAKRLLKEMTEAGL 488
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 113/273 (41%), Gaps = 3/273 (1%)
Query: 238 TIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKK 297
I A + ++ + + + M+ G P S + K G +T +
Sbjct: 44 VINASFQSQLLEQSLDSFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRT 103
Query: 298 MYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGA 357
+ S I + C E+ V ++L + ++ +I + CR D+ A
Sbjct: 104 QFDVYSF-GITIKAFC-ENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQA 161
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
K + S+M G ++ +I+ + K G E+ + M+ G+ P++YTY L++
Sbjct: 162 KVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITE 221
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
Y G++ A ++ +E K + VTY+ LI G C+ + A LL MK + P
Sbjct: 222 YCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPT 281
Query: 478 VDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+N L+ LC A LE ++L GL
Sbjct: 282 TRTFNMLMDGLC-NTGQLDKALSYLEKLKLIGL 313
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 76/191 (39%), Gaps = 35/191 (18%)
Query: 364 MISEGPPPGNAVFNS----------------------------------VISAYSKAGDM 389
M+ +G P + FN+ I A+ + G++
Sbjct: 64 MVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRTQFDVYSFGITIKAFCENGNV 123
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
+ E+L M + G+ P+V+ YT L+ G +++A + + + Y +
Sbjct: 124 SKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIM 183
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
I G+ K +L +MK VGV PN+ YN LI C A K+ +++ +G
Sbjct: 184 INGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDG-KLSLAFKVFDEISKRG 242
Query: 510 LHLNGITRALI 520
+ N +T ++
Sbjct: 243 VACNAVTYNIL 253
>gi|12320851|gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thaliana]
Length = 802
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 150/321 (46%), Gaps = 10/321 (3%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
I N I +F + + + A + G V N TY I + A + E M
Sbjct: 279 ICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDM 338
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAH-VVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
G LPD I+ + CK + E ++ +A+E + P Q LI L + D
Sbjct: 339 HSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDH 398
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
+ AL L D + + +S+++ +LC+ + AK L+++M PP +
Sbjct: 399 ADE-ALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEM---DCPPDVVTYT 454
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+V++ + + G++ A ++L++M + G KP+ +YT L++G G+ EA E++N ++++
Sbjct: 455 AVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEH 514
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
+ +TY ++ G + + A ++ EM G P E N L+QSLC D RT
Sbjct: 515 WWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLC---RDGRT 571
Query: 498 --AEKLLEDMRLKGLHLNGIT 516
A K +E+ KG +N +
Sbjct: 572 HEARKFMEECLNKGCAINVVN 592
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 155/361 (42%), Gaps = 45/361 (12%)
Query: 194 VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWS 253
V V N +I + L + + A E+ GC+ ++ +YY + L + K
Sbjct: 309 VPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRD 368
Query: 254 VCEKMI-ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSL 312
+ +KM E G +PD +I K A EA A+EK + + ++ +L
Sbjct: 369 LMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHAL 428
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
C+E + A D++++ + +++V+ CR+ +V AK LL M + G P
Sbjct: 429 CKEGRMSE-AKDLINEMDCPP---DVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPN 484
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+ ++++ + G A EM+ + P+ TY+ +M G G++ EAC+++
Sbjct: 485 TVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVR 544
Query: 433 E-----------------------AKKNHSR------------LSPVTYHTLIRGYCKLE 457
E + + +R ++ V + T+I G+C+ +
Sbjct: 545 EMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQND 604
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE--KLLEDMRLKGLHLNGI 515
E D AL +L++M + +V Y L+ +L K R AE +L++ M KG+ +
Sbjct: 605 ELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKG---RIAEATELMKKMLHKGIDPTPV 661
Query: 516 T 516
T
Sbjct: 662 T 662
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 135/295 (45%), Gaps = 20/295 (6%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
++ K G+ A ++ N+ C + TY + R D A + + M G
Sbjct: 424 IVHALCKEGRMSEAKDLINEMD---CPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHG 480
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P++ +++ C+ GK+ EA + ++ E+ + P S+ +I + + + A
Sbjct: 481 HKPNTVSYTALLNGMCRTGKSLEAREMMNMS-EEHWWSPNSITYSVIMHGLRREGKLSEA 539
Query: 323 LDMLDDFSGEARKYAIKPF-------SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
D++ R+ +K F + +++SLCR H A+ + + +++G
Sbjct: 540 CDVV-------REMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVN 592
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
F +VI + + ++ A+ +L M DV+TYT L+ G++ EA E++ +
Sbjct: 593 FTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKML 652
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
+PVTY T+I YC++ + D + +L +M + Q YN++I+ LC+
Sbjct: 653 HKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKM--ISRQKCRTIYNQVIEKLCV 705
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 138/332 (41%), Gaps = 11/332 (3%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
A++ C + L ++ G K V +LN + + GK A E+ N
Sbjct: 455 AVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGM----CRTGKSLEAREMMNM 510
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
++ N TY + L R A V +M+ G P ++ ++ C+ G+
Sbjct: 511 SEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGR 570
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
EA K +VV F +I CQ DE + AL +LDD + +
Sbjct: 571 THEARKFMEECLNKGC--AINVVNFTTVIHGFCQNDE-LDAALSVLDDMYLINKHADVFT 627
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+++++ +L + + A L+ KM+ +G P + +VI Y + G + + +L+ M
Sbjct: 628 YTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMI 687
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
SR +Y ++ G++EEA +L + + SR T + L+ GY K
Sbjct: 688 SRQKCRTIYNQ--VIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPL 745
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
A K+ M + + P+V KL + L LK
Sbjct: 746 SAYKVACRMFNRNLIPDVKMCEKLSKRLVLKG 777
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 4/189 (2%)
Query: 301 PQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTL 360
P V A L S Q+DE V L D R + + S++ L + K G++ +
Sbjct: 174 PSQVCAVLRS---QDDERVALKFFYWADRQWRYRHDPM-VYYSMLEVLSKTKLCQGSRRV 229
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
L M G F+ V+ +YS+AG + A+++L LM+ G++P++ + +
Sbjct: 230 LVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVR 289
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
++E+A L + + VTY+ +IRGYC L + A++LL +M G P+
Sbjct: 290 ANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVS 349
Query: 481 YNKLIQSLC 489
Y ++ LC
Sbjct: 350 YYTIMGYLC 358
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 1/149 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
FS V+ S R + A +L+ M G P + N+ I + +A + A+ L+ M+
Sbjct: 245 FSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQ 304
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G+ P+V TY ++ GY + ++EEA E+L + V+Y+T++ CK +
Sbjct: 305 VVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIV 364
Query: 461 CALKLLNEM-KDVGVQPNVDEYNKLIQSL 488
L+ +M K+ G+ P+ YN LI L
Sbjct: 365 EVRDLMKKMAKEHGLVPDQVTYNTLIHML 393
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 7/138 (5%)
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
V+ S++ SK + +L LM+ RG+ ++ +M Y+ GQ+ +A ++L
Sbjct: 209 VYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLM 268
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
++ + + +T I + + + AL+ L M+ VG+ PNV YN +I+ C D
Sbjct: 269 QRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYC----D 324
Query: 495 WRTAE---KLLEDMRLKG 509
E +LLEDM KG
Sbjct: 325 LHRVEEAIELLEDMHSKG 342
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 98/253 (38%), Gaps = 10/253 (3%)
Query: 182 DIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEA 241
D+V+E+ K VEI N L+ + G+ A + + + GC N + I
Sbjct: 541 DVVREMVLKGFFPGPVEI-NLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHG 599
Query: 242 LSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPP 301
+ D A SV + M D ++ K G+ EA + K + P
Sbjct: 600 FCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPT 659
Query: 302 QSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
+I CQ D+ V + M+ +R+ ++ VI LC + + A
Sbjct: 660 PVTYRTVIHRYCQMGKVDDLVAILEKMI------SRQKCRTIYNQVIEKLCVLGKLEEAD 713
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
TLL K++ +++ Y K G A ++ M +R L PDV L
Sbjct: 714 TLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRL 773
Query: 419 ANGGQMEEACEIL 431
G+++EA +++
Sbjct: 774 VLKGKVDEADKLM 786
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 165/371 (44%), Gaps = 21/371 (5%)
Query: 166 KAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGD 225
+ +C VGK E + I+KE+ K V ++I + K + +F +F +
Sbjct: 425 RCLCG-VGKFE--KAFQILKEMMRK-GFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKR 480
Query: 226 YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKE 285
G + TY I++ + + + A S ++M G P+ ++ + K + +
Sbjct: 481 AGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQ 540
Query: 286 AHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK----------LALDMLDDFSGEARK 335
AH ++ + YP + LI LC+ E K + ++ DF E
Sbjct: 541 AHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGND 600
Query: 336 YA-IKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
I P + ++I LC+ + V A LL M++ G P V++++I + K G +
Sbjct: 601 TCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKID 660
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A E+ M G P V+TYT L+ G+++ A ++L+E + + VTY +I
Sbjct: 661 NAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMI 720
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
G K+ E + AL LL+ M++ G PNV Y LI L K + KL + M KG
Sbjct: 721 DGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLG-KTGKADASLKLFKQMNSKGC 779
Query: 511 HLNGIT-RALI 520
N +T R LI
Sbjct: 780 APNYVTYRVLI 790
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 151/351 (43%), Gaps = 27/351 (7%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F K G + A F++ GC N TY + A + K A + +M++
Sbjct: 493 LIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAA 552
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVY------TLAREKKMY----------PPQSVVA 306
P++ +I CK G+ ++A VY + E Y P
Sbjct: 553 CYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYG 612
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
LI LC+ + V A ++LD + + ++I C++ + A+ + +M
Sbjct: 613 ALIDGLCKA-QKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTK 671
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
G P + S+I K G + AM++L M + P+V TYT ++ G + G++E+
Sbjct: 672 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEK 731
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A +L+ ++ + VTY LI G K + D +LKL +M G PN Y LI
Sbjct: 732 ALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLIN 791
Query: 487 SLCLKALDWRTAEKLLEDMR-------LKGLH--LNGITRALIRAVKELEE 528
C L A LL++M+ L+G H + G ++ I ++ LEE
Sbjct: 792 HCCAAGL-LDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEE 841
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 131/319 (41%), Gaps = 15/319 (4%)
Query: 181 WDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIE 240
W + EKE L + ++I+ + A ++ C+ N TY +
Sbjct: 255 WADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLS 314
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP 300
++K F W + M+ G P+ ++ +C G A+ ++ R
Sbjct: 315 GFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFN--RMTTCGS 372
Query: 301 PQSVVAF--LISSLCQEDETVKL-ALDMLDDFSGEA-------RKYAIKPFSSVIRSLCR 350
P VA+ I S+C ++E LD+++ E K FS R LC
Sbjct: 373 PPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFS---RCLCG 429
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ A +L +M+ +G P + + VI+ +A + + + + M+ G+ PDVYT
Sbjct: 430 VGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYT 489
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
YT L+ + G +E+A +E + + VTY L+ Y K ++ A + + M
Sbjct: 490 YTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMV 549
Query: 471 DVGVQPNVDEYNKLIQSLC 489
D PN Y+ LI LC
Sbjct: 550 DAACYPNAVTYSALIDGLC 568
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 149/345 (43%), Gaps = 14/345 (4%)
Query: 183 IVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEAL 242
+++EIGE ++ VL +LN L+ + G A E + D+G + TY ++ L
Sbjct: 156 LLREIGEDDREVLR-RLLNVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVL 214
Query: 243 SRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQ 302
+ + + V ++M +G D +G CK G+ +A + EK+ +
Sbjct: 215 ASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGRWADALNML----EKEDFNLD 270
Query: 303 SVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLS 362
+V+ + S E A+ L + + + +++ + K K +++
Sbjct: 271 TVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIIN 330
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG 422
M++EG P ++FNS++ Y AGD A ++ M + G P Y +
Sbjct: 331 MMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQE 390
Query: 423 QMEEACEILNEAKKNHSR-------LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
++ A E+L+ +K + L+ V R C + +F+ A ++L EM G
Sbjct: 391 ELPNA-ELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFV 449
Query: 476 PNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
P+ Y K+I LC +A + L ++M+ G++ + T ++
Sbjct: 450 PDTSTYTKVITFLC-QAKKVEKSFLLFQEMKRAGVNPDVYTYTIL 493
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 134/348 (38%), Gaps = 59/348 (16%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+ +C + + + L D + G + + + + LI F K+GK A EVF +
Sbjct: 613 ALIDGLCKAQKVSDAHELLDAMLAAGCEPNQI----VYDALIDGFCKIGKIDNAQEVFLR 668
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + + TY I+ + + D A V +M+ P+ +I K G+
Sbjct: 669 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGE 728
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIK 339
++A + +L EK P LI L + D ++KL M + G A Y
Sbjct: 729 IEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQM--NSKGCAPNYVT- 785
Query: 340 PFSSVIRSLC-------------RMKDVHGAKTL--------------------LSKMIS 366
+ +I C MK H K L L +M S
Sbjct: 786 -YRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMES 844
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLK---------LMRSRGLKPDVYTYTGLMSG 417
P V+ +I ++SKAG + A+E+ K M S G+ Y L+
Sbjct: 845 HETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGM------YASLIQA 898
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
Q+EEA + E + + + +L++G ++ ++D AL+L
Sbjct: 899 LCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQL 946
>gi|147767159|emb|CAN71515.1| hypothetical protein VITISV_021787 [Vitis vinifera]
Length = 655
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 106/460 (23%), Positives = 201/460 (43%), Gaps = 12/460 (2%)
Query: 37 LSKPSLYRSSRFLSESPAANPKDESSFSPETDFSSRSFGENEYAQMDPSADAVESKEE-- 94
LS S R + +P +NP P+T S ++ + +A +V+ +E+
Sbjct: 25 LSSESSPRWHVLTTSTPISNPLILKWVIPKTQIKSIQITDSRILVIK-TAQSVKEEEDLD 83
Query: 95 -EAYEIDGDKLENVLSLLQSSVDGYLESSLDSFELDLHEDFVLKVLETPLVLGENLVCFF 153
A++ + +L S V LE +L + + +VL G FF
Sbjct: 84 LYAWKAIEKTVYRILRKFHSRVPK-LELALQESGVAVRSGLTERVLNRCGDAGNLGYRFF 142
Query: 154 KWVTS--GVVDA--LLKAICSSVGK-KEVYALWDIVKEIGEKEKGVLTVEILNELIALFS 208
W + G + + KA+ +GK ++ A+W +++E+ + ++ + L+ F+
Sbjct: 143 VWASKQPGYRHSYEVYKAMIKILGKMRQFGAVWALIEEMRRENPQFVSPYVFVVLMRRFA 202
Query: 209 KLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSE 268
K A EV ++ YGC ++ + ++AL + A S+ E M P +
Sbjct: 203 SARMVKKAIEVLDEMPKYGCEPDEHVFGCLLDALCKNGSVKEAASLFEDM-RIRFTPTLK 261
Query: 269 KVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDD 328
++ +C+ GK EA V RE P V L++ + V A D+L +
Sbjct: 262 HFTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVD-AYDLLKE 320
Query: 329 FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD 388
+ + + F+++I++LC K + A + +M S G P + ++IS + K G
Sbjct: 321 MRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGK 380
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHT 448
++ E+L M +G P+ TY +M+ + ++EE E++ E +K Y+
Sbjct: 381 ISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNI 440
Query: 449 LIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+IR CKL E +++ NEM+ G+ P +D + +I
Sbjct: 441 VIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGF 480
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 128/293 (43%), Gaps = 38/293 (12%)
Query: 233 ETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII-SWFCKGGKAKEAHVVYT 291
E Y I+ L + + F W++ E+M S V ++ F K+A V
Sbjct: 156 EVYKAMIKILGKMRQFGAVWALIEEMRRENPQFVSPYVFVVLMRRFASARMVKKAIEVLD 215
Query: 292 LAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRM 351
+ P + V L+ +LC+ + +VK A + +D +K F+S++ CR
Sbjct: 216 EMPKYGCEPDEHVFGCLLDALCK-NGSVKEAASLFEDMRIRFTP-TLKHFTSLLYGWCRE 273
Query: 352 KDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTY 411
+ AK +L ++ G P V+N++++ Y+ AG M A ++LK MR + +P+V ++
Sbjct: 274 GKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSF 333
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL--------------- 456
T L+ +MEEA + E + VTY TLI G+CK
Sbjct: 334 TTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQ 393
Query: 457 --------------------EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
EE + ++L+ EM+ +G P+++ YN +I+ C
Sbjct: 394 QGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLAC 446
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 133/316 (42%), Gaps = 12/316 (3%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+ + N L+ ++ GK A+++ + C N ++ I+AL +K + A V
Sbjct: 295 IVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFF 354
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M G D+ +IS FCK GK + + + ++ + P + I + ++
Sbjct: 355 EMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQG-HIPNPMTYLHIMAAHEKK 413
Query: 317 ETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
E ++ +++++ E RK P ++ VIR C++ ++ + ++M + G PG
Sbjct: 414 EELEECIELME----EMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPG 469
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL--KPDVYTYTGLMSGYANGGQMEEACEI 430
F +I + + A E K M RGL P T L++ ++E + ++
Sbjct: 470 LDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKDV 529
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
+ L+ + I A +M D GV P D + KL++ L
Sbjct: 530 WSCIMTKGCDLNVYAWTIWIHALFSNGHVKEACSYCLDMMDAGVMPQPDTFAKLMRGL-R 588
Query: 491 KALDWRTAEKLLEDMR 506
K + + A ++ E +R
Sbjct: 589 KLYNRQIAAEITEKVR 604
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 160/382 (41%), Gaps = 37/382 (9%)
Query: 171 SVGKKEVYALWDIVKEIGE--KEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGC 228
S+ + L D V G+ K + ++ ++L++ +K+ K + + + G
Sbjct: 53 SINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGI 112
Query: 229 VANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA-- 286
N TY I RR A +V KM++ G PD + +++ FC G + +A
Sbjct: 113 SHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVS 172
Query: 287 ------------------HVVYTLAREKKMYPPQSVVAFLISSLCQEDET---------- 318
+++ L R + ++V ++ CQ D
Sbjct: 173 LVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLC 232
Query: 319 ----VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
+ LAL +L + + ++++I +LC K+V+ A L ++M ++G P
Sbjct: 233 KRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 292
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
+NS+I G + A +L M R + P+V T++ L+ + G++ EA ++ +E
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
K TY +LI G+C + D A + M PNV YN LI+ C KA
Sbjct: 353 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC-KAKR 411
Query: 495 WRTAEKLLEDMRLKGLHLNGIT 516
+L +M +GL N +T
Sbjct: 412 VDEGMELFREMSQRGLVGNTVT 433
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 183/429 (42%), Gaps = 19/429 (4%)
Query: 101 GDKLENVLSLLQSSVD-GYLESSLDSFELDLHEDFVLKVLETPLVLGENLV---CFFKWV 156
G+++ + +SL+ V+ GY S +F +H F + L + +V C V
Sbjct: 164 GNRISDAVSLVGQMVEMGYQPDSF-TFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLV 222
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEI--GEKEKGVLTVEILNELIALFSKLGKGK 214
T G+V + +C + ++ ++K++ G+ E GV+ I N +I
Sbjct: 223 TYGIV---VNGLCK---RGDIDLALSLLKKMEQGKIEPGVV---IYNTIIDALCNYKNVN 273
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
A +F + + G N TY I L + A + MIE P+ +I
Sbjct: 274 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 333
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR 334
F K GK EA +Y ++ + P + LI+ C D + A M + +
Sbjct: 334 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR-LDEAKHMFELMISKDC 392
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
+ ++++I+ C+ K V L +M G + ++I + +A + A
Sbjct: 393 FPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQI 452
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+ K M S G+ PD+ TY+ L+ G N G++E A + +++ TY+ +I G C
Sbjct: 453 VFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMC 512
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG-LHLN 513
K + + L + GV+PNV Y ++ C K L A+ L +M+ +G L +
Sbjct: 513 KAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLK-EEADALFREMKEEGPLPDS 571
Query: 514 GITRALIRA 522
G LIRA
Sbjct: 572 GTYNTLIRA 580
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 112/222 (50%), Gaps = 4/222 (1%)
Query: 306 AFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI 365
+ LI+ C+ + + LAL +L + I +S++ C + A +L+ +M+
Sbjct: 120 SILINCFCRRSQ-LSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
G P + FN++I + + A+ ++ M +G +PD+ TY +++G G ++
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
A +L + ++ V Y+T+I C + + AL L EM + G++PNV YN LI
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 486 QSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRA-VKE 525
+ LC W A +LL DM + ++ N +T ALI A VKE
Sbjct: 299 RCLCNYG-RWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 339
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 2/227 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI F K + E+F + G V N TY I + + D A V ++M+
Sbjct: 400 NTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS 459
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G LPD ++ C GK + A VV+ + KM P +I +C+ + V+
Sbjct: 460 DGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK-VE 518
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
D+ S + K + +++++ CR A L +M EGP P + +N++I
Sbjct: 519 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
A+ + GD + E+++ MRS D T GL++ + G+++++
Sbjct: 579 RAHLRDGDKAASAELIREMRSCRFVGDAST-IGLVTNMLHDGRLDKS 624
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 108/275 (39%), Gaps = 1/275 (0%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
V + LI F K GK A +++++ + TY I D A +
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 384
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
E MI P+ +I FCK + E ++ ++ + LI Q
Sbjct: 385 ELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 444
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
E + + + I +S ++ LC V A + + P
Sbjct: 445 RECDNAQI-VFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYT 503
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N +I KAG + ++ + +G+KP+V TYT +MSG+ G EEA + E K
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMK 563
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
+ TY+TLIR + + + + +L+ EM+
Sbjct: 564 EEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 598
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 102/223 (45%), Gaps = 24/223 (10%)
Query: 328 DFSG---EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
DFSG + RK +I + + ++ D A L M+ P P F+ ++SA +
Sbjct: 41 DFSGVRYDYRKISINRLNDL-----KLDD---AVNLFGDMVKSRPFPSIVEFSKLLSAIA 92
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV 444
K + + + M++ G+ ++YTY+ L++ + Q+ A +L + K V
Sbjct: 93 KMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIV 152
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL--------CLKALDWR 496
T ++L+ G+C A+ L+ +M ++G QP+ +N LI L + +D
Sbjct: 153 TLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRM 212
Query: 497 TAEKLLEDMRLKGLHLNGITRA-----LIRAVKELEEDAIENG 534
+ D+ G+ +NG+ + + +K++E+ IE G
Sbjct: 213 VVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPG 255
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 132/299 (44%), Gaps = 7/299 (2%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
T+ N LI+ + + A + G A+ TY ++ L + A +
Sbjct: 151 TLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLL 210
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
E+M +G PD + CK GK AH V R+ P ++ LC+
Sbjct: 211 ERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKS 270
Query: 316 DETVKLALDMLDDF-SGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
+ + AL+M++ S + + +S+V+ LC++ A++++ M G P
Sbjct: 271 GK-IDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVV 329
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE- 433
++S+++ KAG + A+E ++ M G KP+ TY L+ G + G++ EA ++ E
Sbjct: 330 TYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEM 389
Query: 434 ----AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+H S TY+ LI G CK D ALK M+ G P+ Y+ +++ L
Sbjct: 390 SSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGL 448
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 135/302 (44%), Gaps = 12/302 (3%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
GC T+ I R K + A S+ + M +G D ++ CK G+ +EA
Sbjct: 147 GCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEA 206
Query: 287 HVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSV 344
+ L R K VVA+ + LC+ + + A +L+ + ++++
Sbjct: 207 EQL--LERMKASGCAPDVVAYSSFVYGLCKSGKVLN-AHQVLEQMRDSDHDPNVVTYNTI 263
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAV-FNSVISAYSKAGDMTPAMEMLKLMRSRG 403
+ LC+ + A ++ +M S N V +++V+ K G A +++ M G
Sbjct: 264 LDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAG 323
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
+PDV TY+ L++G G++EEA E + E + + VTY +L+ G C A
Sbjct: 324 CRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAE 383
Query: 464 KLLNEMKDVG-----VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRA 518
+++ EM G P+V YN LI LC KA A K + MR +G +G++ +
Sbjct: 384 RMVEEMSSGGGGGDHCPPSVSTYNALIGGLC-KAGRIDDALKFFQRMRSQGCDPDGVSYS 442
Query: 519 LI 520
I
Sbjct: 443 TI 444
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 131/308 (42%), Gaps = 39/308 (12%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N L+ FSK G+ + G N +Y +E L + + + A + MI
Sbjct: 13 FNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDMI 72
Query: 260 ETG--SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
G S PD ++S +CK GK +E+ + + + P
Sbjct: 73 SRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRP----------------- 115
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
D L ++ V+ SLC+ + A LL +MI G P FN
Sbjct: 116 ------DAL-------------MYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFN 156
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
++IS + ++ A +L+ M + G+K DV TY LM G G+++EA ++L K +
Sbjct: 157 TLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKAS 216
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
V Y + + G CK + A ++L +M+D PNV YN ++ LC K+ T
Sbjct: 217 GCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLC-KSGKIDT 275
Query: 498 AEKLLEDM 505
A +++E M
Sbjct: 276 ALEMMEQM 283
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 74/131 (56%), Gaps = 2/131 (1%)
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
M G PP + FN++++ +SK G +L+ M +RG++P+V +Y GL+ G +
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60
Query: 424 MEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEY 481
EA E++ + R +P VTY TL+ GYCK + + + +LL E+ G++P+ Y
Sbjct: 61 WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 482 NKLIQSLCLKA 492
K++ SLC A
Sbjct: 121 TKVMASLCKSA 131
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 102/227 (44%), Gaps = 7/227 (3%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET-GSLP 265
K GK A +V + D N TY ++ L + D A + E+M + G
Sbjct: 232 LCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGL 291
Query: 266 DSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDM 325
+ ++ CK G+ +EA V P + L++ LC+ + ++ A++
Sbjct: 292 NVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGK-IEEAVEA 350
Query: 326 LDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS-----EGPPPGNAVFNSVI 380
+ + + E K + S++ LC + A+ ++ +M S + PP + +N++I
Sbjct: 351 VREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALI 410
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
KAG + A++ + MRS+G PD +Y+ ++ G A G+ +A
Sbjct: 411 GGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 148/326 (45%), Gaps = 7/326 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEI-LNELIALFSKLGKGKAAFEVF 220
+AL+ +C G ++ IVKE+ E+G+ I N LI F GK + F +
Sbjct: 469 NALIHGLC---GAGKLPEASRIVKEM--LERGLPMDRITYNALILGFCNEGKVEGCFRLR 523
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ G + TY F + L D A + ++ +G + + G ++ +CK
Sbjct: 524 EEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKA 583
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
+ ++ ++ KKM V +I + CQ + V AL +L++ +
Sbjct: 584 NRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQ-NGNVAAALQLLENMKSKGILPNCAT 642
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+SS+I +C + V AK L+ +M EG P + ++I Y K G M A M
Sbjct: 643 YSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMI 702
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
S + P+ +TYT ++ GY G ME+A +L + K++ VTY+ L G+CK + D
Sbjct: 703 SFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMD 762
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQ 486
A K+ ++M G+ + Y L+
Sbjct: 763 NAFKVCDQMATEGLPVDEITYTTLVH 788
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 145/315 (46%), Gaps = 8/315 (2%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+L L+ K GK A E++ + + G A++ T I L A + ++M
Sbjct: 432 LLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEM 491
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC---QE 315
+E G D +I FC GK + + ++ + P FL+ LC +
Sbjct: 492 LERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKL 551
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
D+ +KL D+F I + ++ C+ + + L ++++S+ + V
Sbjct: 552 DDAIKL----WDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIV 607
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N +I A+ + G++ A+++L+ M+S+G+ P+ TY+ L+ G N G +E+A +++E +
Sbjct: 608 YNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMR 667
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
K + V Y LI GYCKL + D A EM + PN Y +I C K +
Sbjct: 668 KEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYC-KLGNM 726
Query: 496 RTAEKLLEDMRLKGL 510
A LL M+ G+
Sbjct: 727 EKANNLLIKMKESGI 741
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 136/326 (41%), Gaps = 9/326 (2%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I + G+ AFE+ K G N +TY I L + FD + ++MI
Sbjct: 259 NCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIG 318
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ +I +CK G + A + + K + P + L+ C+ D+ ++
Sbjct: 319 AGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQ-IE 377
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A + L++ SV+ LC+ H A M+S P + + ++
Sbjct: 378 HAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLV 437
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
K G A E+ + +G T L+ G G++ EA I+ E +
Sbjct: 438 CGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLP 497
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC--------LKA 492
+ +TY+ LI G+C + + +L EM G+QP++ YN L++ LC +K
Sbjct: 498 MDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKL 557
Query: 493 LDWRTAEKLLEDMRLKGLHLNGITRA 518
D A L+ ++ G+ + G +A
Sbjct: 558 WDEFKASGLISNIHTYGIMMEGYCKA 583
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 122/283 (43%), Gaps = 3/283 (1%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
F LG A +VF G + +T F + +L + F+ V M E G+ PD
Sbjct: 162 FRNLGF-SCAVDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMSE-GACPD 219
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
+I+ CKGGK + A ++ + + P +I+ LCQ + A ++
Sbjct: 220 VFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGR-LDNAFELK 278
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
+ + + + +K + ++I L ++ +L +MI G P VFN++I Y K
Sbjct: 279 EKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKM 338
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
G++ A+++ +M S+ + P T LM G+ Q+E A L E + + P
Sbjct: 339 GNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNC 398
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
++++ CK + A + M +P+ L+ LC
Sbjct: 399 YSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLC 441
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 88/178 (49%), Gaps = 4/178 (2%)
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG 422
+++SEG P F +VI+A K G M A+E+ M G+ P+V TY +++G G
Sbjct: 210 RVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNG 269
Query: 423 QMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
+++ A E+ + + + TY LI G KL FD +L+EM G PNV +N
Sbjct: 270 RLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFN 329
Query: 483 KLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAVKELEEDAIENGEALVE 539
LI C K + A K+ + M K + +T +L++ + D IE+ E +E
Sbjct: 330 NLIDGYC-KMGNIEGALKIKDVMISKNITPTSVTLYSLMQGF--CKSDQIEHAENALE 384
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 32/186 (17%), Positives = 73/186 (39%), Gaps = 1/186 (0%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+ N +I + G AA ++ G + N TY I + + + A + ++M
Sbjct: 607 VYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEM 666
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+ G +P+ +I +CK G+ A + ++P + +I C+
Sbjct: 667 RKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNM 726
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
K A ++L + ++ + C+ D+ A + +M +EG P + +
Sbjct: 727 EK-ANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTT 785
Query: 379 VISAYS 384
++ ++
Sbjct: 786 LVHGWN 791
>gi|77552391|gb|ABA95188.1| salt-inducible protein, putative [Oryza sativa Japonica Group]
Length = 938
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 161/384 (41%), Gaps = 18/384 (4%)
Query: 142 PLVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILN 201
PLV C S +VD L+KA + + L+ + +G V +V N
Sbjct: 256 PLVDHHRRTCATPCSLSFMVDCLIKACITCYDVQATICLFSGICRLGV----VPSVWTWN 311
Query: 202 ELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET 261
L+ ++ G+ + +N+ + + T+ +L + K D A V +M E
Sbjct: 312 LLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEM 371
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYT-LAREKKMYPPQSVVAF--LISSLCQE--- 315
G PD+ + C GK A+V+ + REK P +A+ ++ LC+E
Sbjct: 372 GVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKV---PVEAMAYNMVMDGLCKEMRL 428
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
DE KL L++ + + + +S +IRS C+M ++ A M+S G +
Sbjct: 429 DEAEKL----LENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHI 484
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+ ++ + K G + A+ + GL D Y M Y G M EA ++LNE K
Sbjct: 485 VSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMK 544
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+ Y LI GYC E A ++ EM ++P++ YN L C L
Sbjct: 545 YGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVM 604
Query: 496 RTAEKLLEDMRLKGLHLNGITRAL 519
+ LL+ M +GL N +T +
Sbjct: 605 EVFD-LLDRMADQGLEPNSLTYGI 627
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 187/430 (43%), Gaps = 43/430 (10%)
Query: 111 LQSSVDGYLESSLDSFELDLH-EDFVLKVLETPLVLGENLVCFFKWVTSGV-VDALLKAI 168
L ++VD Y E + H ++L+ + E + F K+ SG+ +D ++ I
Sbjct: 463 LINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNI 522
Query: 169 CSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNE--LIALFSKLGKGKAAFEVFNKFGDY 226
K + + VK + E + G LT + ++ LI+ + G+ + A +VF +
Sbjct: 523 AMDTYCKNG-NMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKA 581
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
+ TY + + + + ++M + G P+S G I FC+GG EA
Sbjct: 582 NIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEA 641
Query: 287 HVVYTLAREKK------MYPPQSVVAFLISSLCQEDETVKLAL----DMLDDFSGEARKY 336
V++ + EK MY V +L+S + + + +++D FS
Sbjct: 642 EVLFNVVEEKGIDHIEVMYSSM-VCGYLLSGWTDHAYMLFVRVARQGNLVDHFSC----- 695
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
S +I LCR+ +V GA + M+ P ++ +IS Y + GDM A
Sbjct: 696 -----SKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWF 750
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK- 455
M RGL DV YT LM+GY G+++EAC++ + + + Y L+ G+ K
Sbjct: 751 HDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKE 810
Query: 456 ---------LEEFDCAL------KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+E L KLL+ MKD+ ++P+V Y LI C KA A +
Sbjct: 811 TLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKC-KAEYLVEARE 869
Query: 501 LLEDMRLKGL 510
L ++M KGL
Sbjct: 870 LFDEMLQKGL 879
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 132/326 (40%), Gaps = 34/326 (10%)
Query: 167 AICSSVGKKEVYALWDIVKEIGEKEKGVLTVEIL-NELIALFSKLGKGKAAFEVFNKFGD 225
C E L+++V+E KG+ +E++ + ++ + G A+ +F +
Sbjct: 631 GFCRGGNLSEAEVLFNVVEE-----KGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVAR 685
Query: 226 YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKE 285
G + + + I L R A +VC+ M+E +PD K+IS +C+ G +
Sbjct: 686 QGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDK 745
Query: 286 AHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFS 342
AH+ + ++ + V L++ C+ E +L + M + IKP
Sbjct: 746 AHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTN--------LGIKP-- 795
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPG-NAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
DV LL + E G + S +A ++L M+
Sbjct: 796 ----------DVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHN----KLLSSMKD 841
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
++PDV YT L+ G + EA E+ +E + Y LI GYC E
Sbjct: 842 MQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISK 901
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQS 487
A LL EM D G++P+ ++ L QS
Sbjct: 902 AEDLLQEMIDKGIEPDELTFSVLNQS 927
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 144/319 (45%), Gaps = 6/319 (1%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
+ L++ SK+ K ++ + G N T + R A S KM+
Sbjct: 84 FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMM 143
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM-YPPQSVV-AFLISSLCQEDE 317
+ G PD G +++ FC+G + +A +Y R +M Y P V+ +I LC+ +
Sbjct: 144 KLGHEPDIVTFGSLLNGFCRGDRIYDA--LYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQ 201
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
V ALD+L+ + + ++S+I LC A ++S M P FN
Sbjct: 202 -VDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFN 260
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
++I A K G ++ A E+ + M R L PD+ TY+ L+ G +++EA ++
Sbjct: 261 ALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSK 320
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
VTY LI GYCK ++ + +KL EM GV N Y LIQ C +A
Sbjct: 321 GCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYC-RAGKLNV 379
Query: 498 AEKLLEDMRLKGLHLNGIT 516
AE++ + M G+ N IT
Sbjct: 380 AEEIFKWMVFCGVPPNIIT 398
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 142/355 (40%), Gaps = 14/355 (3%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+LL C + ++D + E+G + V I N +I K + A ++ N+
Sbjct: 156 SLLNGFCRGDRIYDALYMFDRMVEMGYEP----NVVIYNTIIDGLCKSKQVDNALDLLNR 211
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + TY I L +D A + M + PD +I K G+
Sbjct: 212 MEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGR 271
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP-- 340
EA +Y + + P + LI LC LD + G P
Sbjct: 272 ISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSR-----LDEAEQMFGFMVSKGCFPDV 326
Query: 341 --FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
+S +I C+ K V L +M G + +I Y +AG + A E+ K
Sbjct: 327 VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKW 386
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M G+ P++ TY L+ G + G++E+A IL + +K+ VTY+ +IRG CK E
Sbjct: 387 MVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGE 446
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
A L + G+ P++ Y ++ L K L A+ L M+ G+ N
Sbjct: 447 VADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGE-ADALFRKMKEDGILPN 500
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 102/204 (50%), Gaps = 4/204 (1%)
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+I FS ++ ++ +MK L +M G P N +++ + + ++ A+ L
Sbjct: 80 SIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFL 139
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
M G +PD+ T+ L++G+ G ++ +A + + + + V Y+T+I G CK
Sbjct: 140 GKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKS 199
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++ D AL LLN M+ G++P+ YN LI LC + W A +++ M + ++ + T
Sbjct: 200 KQVDNALDLLNRMEVDGIRPDAVTYNSLISGLC-NSGRWDDATRMVSCMTKREIYPDVFT 258
Query: 517 -RALIRAVKELEEDAIENGEALVE 539
ALI A ++E I E L E
Sbjct: 259 FNALIDAC--VKEGRISEAEELYE 280
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 1/176 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+ ++R+ R + + L M+ P P A F+ ++SA SK + + + M+
Sbjct: 49 YREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G+ ++ T L++ + Q+ A L + K VT+ +L+ G+C+ +
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIY 168
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
AL + + M ++G +PNV YN +I LC K+ A LL M + G+ + +T
Sbjct: 169 DALYMFDRMVEMGYEPNVVIYNTIIDGLC-KSKQVDNALDLLNRMEVDGIRPDAVT 223
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 137/289 (47%), Gaps = 2/289 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
+N L+ + K + A ++F++ D G VAN TY + L + D A S+ + M+
Sbjct: 398 VNSLLRGYLKAPLWEEASKLFDEAVDCG-VANIFTYNIMMSWLCKGGKMDEACSLLDNMV 456
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
G +P+ +I C+ G A V++ + + P + LI ++ ++
Sbjct: 457 NQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSE 516
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
K ALD+ D F+++I LC++ + A+ L + EG P +NS+
Sbjct: 517 K-ALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSI 575
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+ + K G++ A+ + + M G+ P+V TYT L++G+ +++ A + +E ++
Sbjct: 576 VDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGL 635
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
L Y LI G+CK + + A L E+ +VG+ PN YN +I
Sbjct: 636 ELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGF 684
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 152/371 (40%), Gaps = 41/371 (11%)
Query: 195 LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSV 254
+ + + L+ + G +A +FNK + G N+ TY IE + A +
Sbjct: 323 MNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASEL 382
Query: 255 CEKMIETGSLPDSEKVGKII----------------------------------SWFCKG 280
+M G P V ++ SW CKG
Sbjct: 383 YTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKG 442
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAI 338
GK EA + + M P +VV++ +I C++ + +A + D K +
Sbjct: 443 GKMDEACSLLDNMVNQGMVP--NVVSYNDMILGHCRKG-NMDMASSVFSDMLARDLKPNV 499
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
+S +I + D A L +M+S P + FN++I+ K G M+ A + LK
Sbjct: 500 VTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKN 559
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
G P TY ++ G+ G ++ A + E + + VTY +LI G+CK
Sbjct: 560 FLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNR 619
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-R 517
D ALK +EM++ G++ +V Y+ LI C K D +A+ L ++ GL N I
Sbjct: 620 IDLALKTRDEMREKGLELDVTAYSALIDGFC-KRRDMESAQDLFFELLEVGLSPNRIVYN 678
Query: 518 ALIRAVKELEE 528
++I ++L
Sbjct: 679 SMISGFRDLNN 689
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 129/313 (41%), Gaps = 36/313 (11%)
Query: 209 KLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSE 268
K G + A ++F++ T+ I L + A + +E G +P
Sbjct: 511 KKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCM 570
Query: 269 KVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDD 328
I+ F K G A VY E + P LI+ C+ + + LAL D+
Sbjct: 571 TYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNR-IDLALKTRDE 629
Query: 329 FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD 388
+ + + +S++I C+ +D+ A+ L +++ G P V+NS+IS + +
Sbjct: 630 MREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNN 689
Query: 389 MTPAM-----------------------------------EMLKLMRSRGLKPDVYTYTG 413
M A+ ++ M S+G+ PD+ T+
Sbjct: 690 MEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHV 749
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
L++G N GQ+E A +IL E + + S + Y+TLI GY + A L +EM D G
Sbjct: 750 LVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRG 809
Query: 474 VQPNVDEYNKLIQ 486
+ P+ Y+ LI
Sbjct: 810 LVPDDVTYDILIN 822
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 146/322 (45%), Gaps = 3/322 (0%)
Query: 195 LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSV 254
L + N L+ + + + + A + FN + + AL RR + +
Sbjct: 148 LDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDL 207
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
KM+ G D V ++ K G+ +EA + +E+ + + +I ++C+
Sbjct: 208 YNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCK 267
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
+ + L L++L++ + F+SVI + ++ A L +MI+ G P
Sbjct: 268 KPNS-NLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLV 326
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
V S++ Y G++ A+ + + GL P+ TY+ L+ G N G +E+A E+ +
Sbjct: 327 VATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQM 386
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
K N S ++L+RGY K ++ A KL +E D GV N+ YN ++ LC K
Sbjct: 387 KLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLC-KGGK 444
Query: 495 WRTAEKLLEDMRLKGLHLNGIT 516
A LL++M +G+ N ++
Sbjct: 445 MDEACSLLDNMVNQGMVPNVVS 466
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/390 (21%), Positives = 157/390 (40%), Gaps = 29/390 (7%)
Query: 119 LESSLDSFELDLHEDFV-----LKVLETPLV----LGENLVCFFKWVTSGV------VDA 163
+E+++D F + +D + + +L T LV +GE + K V G+ V
Sbjct: 166 IENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHV 225
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEK-EKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+++A +E + KE G K + G ++ +I K E+ +
Sbjct: 226 MVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSI-----IIQAVCKKPNSNLGLELLEE 280
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ G V ++ T+ I A + A + E+MI G + ++ +C G
Sbjct: 281 MKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGN 340
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
A ++ E ++P + + LI C K + + + + I P
Sbjct: 341 LDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKAS-----ELYTQMKLNGIPPSV 395
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA---VFNSVISAYSKAGDMTPAMEMLKLM 399
+ SL R SK+ E G A +N ++S K G M A +L M
Sbjct: 396 FNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNM 455
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
++G+ P+V +Y ++ G+ G M+ A + ++ + + VTY LI G K +
Sbjct: 456 VNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDS 515
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ AL L ++M + + P +N +I LC
Sbjct: 516 EKALDLFDQMLSLNIAPTDFTFNTIINGLC 545
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 106/252 (42%), Gaps = 1/252 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N ++ F K G +A V+ + ++G N TY I + D A ++M E
Sbjct: 573 NSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMRE 632
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G D +I FCK + A ++ E + P + V +IS ++ ++
Sbjct: 633 KGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGF-RDLNNME 691
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
AL + + ++++I L + + A L +M+S+G P F+ ++
Sbjct: 692 AALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLV 751
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ G + A ++L+ M + + P V Y L++GY G ++EA + +E
Sbjct: 752 NGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLV 811
Query: 441 LSPVTYHTLIRG 452
VTY LI G
Sbjct: 812 PDDVTYDILING 823
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 152/352 (43%), Gaps = 43/352 (12%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEIL--NELIALFSKLGKGKAAFEVFN 221
LLK++C + L ++ E G V + +++ +I F K G A ++F
Sbjct: 192 LLKSLCDQGKSGQADDLLRMMAEGG----AVCSPDVVAYTTVIDCFFKEGDVNKACDLFK 247
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ G + TY + AL + + A + +M+ G LPD+ +I + G
Sbjct: 248 EMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTG 307
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ KEA V+ R + P + L+ML
Sbjct: 308 QWKEAVRVFKEMRRHSILPDV------------------VTLNML--------------- 334
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+ SLC+ + A+ + M +G P + +++ Y+ G + ++ LM
Sbjct: 335 ---MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLG 391
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+ PD+YT++ L+ YAN G +++A I NE + + + VTY T+I C++ + D
Sbjct: 392 DGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDD 451
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
A++ N+M D GV P+ Y+ LIQ C + E +LE M G+ L+
Sbjct: 452 AMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMN-NGMRLD 502
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 131/296 (44%), Gaps = 9/296 (3%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V LN L+ K GK K A +VF+ G + +Y + + + + +
Sbjct: 328 VVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFD 387
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ-- 314
M+ G PD +I + G +A +++ R+ + P +I++LC+
Sbjct: 388 LMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIG 447
Query: 315 -EDETVKLALDMLDDFSGEA-RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
D+ ++ M+D G A KYA + +I+ C + AK L+ ++++ G
Sbjct: 448 KMDDAMEKFNQMID--QGVAPDKYA---YHCLIQGFCTHGSLLKAKELILEIMNNGMRLD 502
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
F+S+I+ K G + A + L + G PD Y+ LM GY G+ME+A + +
Sbjct: 503 IVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFD 562
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ V Y TL+ GYCK+ D L L EM G++P+ YN +I L
Sbjct: 563 AMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 618
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 115/267 (43%), Gaps = 38/267 (14%)
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDE 317
E G +PD ++ C GK+ +A + + E VVA+ +I +E +
Sbjct: 179 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGD 238
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
K A D+ + + +SSV+ +LC+ + + A+ L +M+++G P N +N
Sbjct: 239 VNK-ACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYN 297
Query: 378 SVISAYSKAGDMTPAMEMLKLMRS-----------------------------------R 402
++I YS G A+ + K MR +
Sbjct: 298 NLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMK 357
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G PDV++Y +++GYA G + + ++ + + T+ LI+ Y D A
Sbjct: 358 GQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKA 417
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + NEM+D GV+P+V Y +I +LC
Sbjct: 418 MIIFNEMRDHGVKPDVVTYTTVIAALC 444
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 124/286 (43%), Gaps = 1/286 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI ++ G A +FN+ D+G + TY I AL R D A +MI+ G
Sbjct: 404 LIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQG 463
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD +I FC G +A + M + +I++LC+ + A
Sbjct: 464 VAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMD-A 522
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++ D + +S ++ C + + A + M+S G P V+ ++++
Sbjct: 523 QNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNG 582
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y K G + + + + M +G+KP Y ++ G G+ A +E ++ ++
Sbjct: 583 YCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAIN 642
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
TY+ ++RG+ K FD A+ L E++ + V+ ++ N +I +
Sbjct: 643 KCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGM 688
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 114/276 (41%), Gaps = 1/276 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+IA ++GK A E FN+ D G ++ Y+ I+ A + +++ G
Sbjct: 439 VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNG 498
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
D II+ CK G+ +A ++ L +P V + L+ C + K A
Sbjct: 499 MRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEK-A 557
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
L + D + + + +++ C++ + +L +M+ +G P ++N +I
Sbjct: 558 LRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDG 617
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
AG PA M G+ + TY ++ G+ +EA + E + + ++
Sbjct: 618 LFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKID 677
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
+T +T+I G + + A L + G+ P V
Sbjct: 678 IITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCV 713
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 6/140 (4%)
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSR--GLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+ N ++ + +A A+++L L R+ G PDV++Y+ L+ + G+ +A ++L
Sbjct: 152 IANHLLKGFCEAKRTDEALDIL-LHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLR 210
Query: 433 EAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
+ + SP V Y T+I + K + + A L EM G+ P++ Y+ ++ +LC
Sbjct: 211 MMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALC- 269
Query: 491 KALDWRTAEKLLEDMRLKGL 510
KA AE L M KG+
Sbjct: 270 KARAMGKAEAFLRQMVNKGV 289
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 13/146 (8%)
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT-----PAMEMLKLMRS-------RGL 404
A LL ++ G P N ++A ++A PA+ + R+ R L
Sbjct: 52 AHDLLDELQRRGTPVLGRDLNGFLAALARAPSSAACGSGPALAVALFNRAASRAQGPRVL 111
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
P +TY LM + E A + + R+ + + L++G+C+ + D AL
Sbjct: 112 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALD 171
Query: 465 -LLNEMKDVGVQPNVDEYNKLIQSLC 489
LL+ ++G P+V Y+ L++SLC
Sbjct: 172 ILLHRTPELGCVPDVFSYSILLKSLC 197
>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 139/320 (43%), Gaps = 42/320 (13%)
Query: 234 TYYFT--IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYT 291
T+ F + +L + K + S+ ++ G PD + +I+ FC A V+
Sbjct: 58 TFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFA 117
Query: 292 LAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRM 351
++ +P + LI LC E +K L D + + + ++I LC+
Sbjct: 118 NILKRGFHPDAITLNTLIKGLCFRGE-IKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKA 176
Query: 352 KDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTY 411
+ LL K+ P ++N++I++ K + A ++ M +G+ PDV TY
Sbjct: 177 GETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTY 236
Query: 412 TGLMSGYANGGQMEEACEILNEAK-KN--------------------------------- 437
T L+ G+ G+M+EA +LNE K KN
Sbjct: 237 TTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEE 296
Query: 438 --HSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
H + P VTY++LI G CK + A+ LL EMK+ G+QP+V Y L+ LC K
Sbjct: 297 MKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLC-KGG 355
Query: 494 DWRTAEKLLEDMRLKGLHLN 513
A++ + + +KG HLN
Sbjct: 356 RLEIAKEFFQHLLVKGCHLN 375
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 147/350 (42%), Gaps = 38/350 (10%)
Query: 161 VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVF 220
++ L+K +C K+ D V G + V ++N L K G+ KA +
Sbjct: 131 LNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGL----CKAGETKAVARLL 186
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
K + + Y I +L + K+ A V +MI G PD +I FC
Sbjct: 187 RKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIM 246
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
GK KEA + + K + P + LI +L +E + M+D+
Sbjct: 247 GKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKK-----KMVDE------------ 289
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
A +L +M + P +NS+I K + A+ +LK M+
Sbjct: 290 ----------------AMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMK 333
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G++PDVY+YT L+ G GG++E A E L+ Y+ +I G CK F
Sbjct: 334 EHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFG 393
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
A+ L ++M+ G PN + +I +L K + + AEK+L +M +GL
Sbjct: 394 EAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDK-AEKILREMIARGL 442
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 1/176 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F++++ SL + K +L + G P + +I+ + +T A + +
Sbjct: 61 FNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANIL 120
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
RG PD T L+ G G++++ ++ +L V+Y TLI G CK E
Sbjct: 121 KRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGETK 180
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+LL +++ V+P+V YN +I SLC L A + +M +KG+ + +T
Sbjct: 181 AVARLLRKLEGHSVKPDVVMYNTIINSLCKNKL-LGDACDVYSEMIVKGISPDVVT 235
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 111/257 (43%), Gaps = 6/257 (2%)
Query: 287 HVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSV 344
H V + M PP F ++SSL + ++ + + F + S +
Sbjct: 41 HAVASFNLMLLMRPPPPTFLFNNILSSLVK-NKRYPTVISLFKQFEPNGITPDLCTLSIL 99
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
I C + A ++ + ++ G P N++I G++ + + ++G
Sbjct: 100 INCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGF 159
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
+ D +Y L++G G+ + +L + + + + V Y+T+I CK + A
Sbjct: 160 QLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACD 219
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAV 523
+ +EM G+ P+V Y LI C+ + A LL +M+LK ++ + T LI A+
Sbjct: 220 VYSEMIVKGISPDVVTYTTLIHGFCIMG-KMKEAFSLLNEMKLKNINPDVYTFSVLIDAL 278
Query: 524 -KELEEDAIENGEALVE 539
KE ++ ++ +L E
Sbjct: 279 GKEGKKKMVDEAMSLFE 295
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 66/151 (43%), Gaps = 1/151 (0%)
Query: 355 HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
H A + M+ PPP +FN+++S+ K + + K G+ PD+ T + L
Sbjct: 40 HHAVASFNLMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSIL 99
Query: 415 MSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV 474
++ + + + A + K +T +TLI+G C E L +++ G
Sbjct: 100 INCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGF 159
Query: 475 QPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
Q + Y LI LC KA + + +LL +
Sbjct: 160 QLDQVSYGTLINGLC-KAGETKAVARLLRKL 189
>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 150/327 (45%), Gaps = 7/327 (2%)
Query: 160 VVDALLKAICSSVGKKE-VYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFE 218
V+ ++L CS VG E Y L+ +K +G + V I+N L+ F + + A+
Sbjct: 361 VIFSVLINGCSKVGDMEKAYELYTRMKLMGIQP----NVFIVNSLLEGFHEQNLLEHAYG 416
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+F++ ++G + N TY ++ L + A ++ EKM+ G P +I C
Sbjct: 417 LFDEAVEHG-ITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHC 475
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
K G +A+ + E+ + P LI ++ ++ + A + +
Sbjct: 476 KKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSER-AFVVFEQMMAANIAPTD 534
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
F++VI L + V + L+ I +G + +NS+I + K G + A+ +
Sbjct: 535 HTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYRE 594
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M G+ PDV TYT L+ G ++ A E+ ++ K +L V Y LI G+CK+ +
Sbjct: 595 MCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHD 654
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLI 485
+ A K E+ D+G+ PN YN +I
Sbjct: 655 MESASKFFTELLDIGLTPNTVVYNSMI 681
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 149/370 (40%), Gaps = 42/370 (11%)
Query: 154 KWVTSGVV--DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLG 211
K +T +V + L+ C + Y++ + E G K V LI F K G
Sbjct: 458 KGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAV----TYTLLIDGFFKKG 513
Query: 212 KGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVG 271
+ AF VF + T+ I L + I+ G + S
Sbjct: 514 DSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYN 573
Query: 272 KIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSG 331
II F K G A + Y E + P LI LC+ ++ + LAL+M D
Sbjct: 574 SIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNK-IGLALEMHSDMKY 632
Query: 332 EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS------- 384
+ K + +S++I C+M D+ A ++++ G P V+NS+IS +
Sbjct: 633 KGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEA 692
Query: 385 ----------------------------KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
K G ++ A+++ M S+ + PD+ YT L++
Sbjct: 693 ALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLIN 752
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
G +N GQ+E A +IL E N+ S + Y+ LI G + A +L +EM D G+ P
Sbjct: 753 GLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVP 812
Query: 477 NVDEYNKLIQ 486
+ Y+ L+
Sbjct: 813 DDTTYDILVN 822
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 138/303 (45%), Gaps = 44/303 (14%)
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
+ A + ++++E G +PD +I+ K G ++A+ +YT + + P +V L
Sbjct: 342 NLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSL 401
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIK---PFSSVIRSLCRMKDVHGAKTLLSKMI 365
+ E ++ A + D EA ++ I ++ +++ L + V+ A L KM+
Sbjct: 402 LEGF-HEQNLLEHAYGLFD----EAVEHGITNVVTYNILLKWLGELGKVNEACNLWEKMV 456
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
S+G P +N++I + K G M A MLK + RGLKP+ TYT L+ G+ G E
Sbjct: 457 SKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSE 516
Query: 426 EACEIL------NEAKKNHS------------RLS-----------------PVTYHTLI 450
A + N A +H+ R+S +TY+++I
Sbjct: 517 RAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSII 576
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
G+ K D AL EM + G+ P+V Y LI LC K+ A ++ DM+ KG+
Sbjct: 577 DGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLC-KSNKIGLALEMHSDMKYKGM 635
Query: 511 HLN 513
L+
Sbjct: 636 KLD 638
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 152/366 (41%), Gaps = 14/366 (3%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
+V++LL+ + Y L+D E G+ V N L+ +LGK A +
Sbjct: 397 IVNSLLEGFHEQNLLEHAYGLFD-----EAVEHGITNVVTYNILLKWLGELGKVNEACNL 451
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
+ K G + +Y I ++ D A+S+ + ++E G P++ +I F K
Sbjct: 452 WEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFK 511
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
G ++ A VV+ + P +I+ L + V D L++F +
Sbjct: 512 KGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGR-VSETQDKLNNFIKQGFVSTSI 570
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
++S+I + V A +M G P + S+I K+ + A+EM M
Sbjct: 571 TYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDM 630
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
+ +G+K DV Y+ L+ G+ ME A + E + V Y+++I G+ L
Sbjct: 631 KYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNM 690
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQ--------SLCLKALDWRTAEKLLEDMRLKGLH 511
+ AL L EM V ++ Y +I SL L ++ ++ D+ + +
Sbjct: 691 EAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVL 750
Query: 512 LNGITR 517
+NG++
Sbjct: 751 INGLSN 756
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 153/359 (42%), Gaps = 11/359 (3%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
V +L+K C L+D V E G V V I + LI SK+G + A+E+
Sbjct: 327 VTRSLMKGYCVLGDVNLALQLFDEVVEGGV----VPDVVIFSVLINGCSKVGDMEKAYEL 382
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
+ + G N +E + + + A+ + ++ +E G + + ++ W +
Sbjct: 383 YTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHG-ITNVVTYNILLKWLGE 441
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
GK EA ++ K + P LI C++ K A ML K
Sbjct: 442 LGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDK-AYSMLKSILERGLKPNAV 500
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
++ +I + D A + +M++ P + FN+VI+ K G ++ + L
Sbjct: 501 TYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNF 560
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLE 457
+G TY ++ G+ G ++ A +L + S +SP +TY +LI G CK
Sbjct: 561 IKQGFVSTSITYNSIIDGFFKEGAVDSA--LLAYREMCESGISPDVITYTSLIDGLCKSN 618
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ AL++ ++MK G++ +V Y+ LI C K D +A K ++ GL N +
Sbjct: 619 KIGLALEMHSDMKYKGMKLDVVAYSALIDGFC-KMHDMESASKFFTELLDIGLTPNTVV 676
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 119/269 (44%), Gaps = 9/269 (3%)
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
G YG ++ + + +++ R A M+E +P + +++ +
Sbjct: 142 GRYGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMV 201
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK---- 339
+A +Y E+ +Y + ++ + +E + + ++ F EA+ ++
Sbjct: 202 CDARQLYDEMVERGIYGDCYTLHVVMRACMKEGK-----FEEVEKFFKEAKGRGLEVDAA 256
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
+S +++++CR D++ A LL +M G P + +VI A K G+ A+ + M
Sbjct: 257 AYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEM 316
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
S GL +V LM GY G + A ++ +E + V + LI G K+ +
Sbjct: 317 VSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDM 376
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ A +L MK +G+QPNV N L++
Sbjct: 377 EKAYELYTRMKLMGIQPNVFIVNSLLEGF 405
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 97/238 (40%), Gaps = 46/238 (19%)
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
++++ ++ R V A+ L +M+ G + V+ A K G + K +
Sbjct: 189 NNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKG 248
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY--------------- 446
RGL+ D Y+ L+ + ACE+L E ++ S TY
Sbjct: 249 RGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVE 308
Query: 447 --------------------HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
+L++GYC L + + AL+L +E+ + GV P+V ++ LI
Sbjct: 309 ALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLIN 368
Query: 487 SLCLKALDWRTAEKLLEDMRLKGLHLN-GITRALIRAVKE---------LEEDAIENG 534
C K D A +L M+L G+ N I +L+ E L ++A+E+G
Sbjct: 369 G-CSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHG 425
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 148/326 (45%), Gaps = 7/326 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEI-LNELIALFSKLGKGKAAFEVF 220
+AL+ +C G ++ IVKE+ E+G+ I N LI F GK + F +
Sbjct: 492 NALIHGLC---GAGKLPEASRIVKEM--LERGLPMDRITYNALILGFCNEGKVEGCFRLR 546
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ G + TY F + L D A + ++ +G + + G ++ +CK
Sbjct: 547 EEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKA 606
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
+ ++ ++ KKM V +I + CQ + V AL +L++ +
Sbjct: 607 NRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQ-NGNVAAALQLLENMKSKGILPNCAT 665
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+SS+I +C + V AK L+ +M EG P + ++I Y K G M A M
Sbjct: 666 YSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMI 725
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
S + P+ +TYT ++ GY G ME+A +L + K++ VTY+ L G+CK + D
Sbjct: 726 SFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMD 785
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQ 486
A K+ ++M G+ + Y L+
Sbjct: 786 NAFKVCDQMATEGLPVDEITYTTLVH 811
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 145/315 (46%), Gaps = 8/315 (2%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+L L+ K GK A E++ + + G A++ T I L A + ++M
Sbjct: 455 LLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEM 514
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC---QE 315
+E G D +I FC GK + + ++ + P FL+ LC +
Sbjct: 515 LERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKL 574
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
D+ +KL D+F I + ++ C+ + + L ++++S+ + V
Sbjct: 575 DDAIKL----WDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIV 630
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N +I A+ + G++ A+++L+ M+S+G+ P+ TY+ L+ G N G +E+A +++E +
Sbjct: 631 YNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMR 690
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
K + V Y LI GYCKL + D A EM + PN Y +I C K +
Sbjct: 691 KEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYC-KLGNM 749
Query: 496 RTAEKLLEDMRLKGL 510
A LL M+ G+
Sbjct: 750 EKANNLLIKMKESGI 764
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 152/363 (41%), Gaps = 13/363 (3%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
++ A+C + L+ ++++G V I+N L + G+ AFE+ K
Sbjct: 249 VINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGL----CQNGRLDNAFELKEKM 304
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
G N +TY I L + FD V ++MI +G P+ +I +CK G
Sbjct: 305 TVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNI 364
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
+ A + + K + P + L+ C+ D+ ++ A + L++ S
Sbjct: 365 EGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQ-IEHAENALEEILSSGLSIHPDNCYS 423
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
V+ LC+ H A M+S P + + ++ K G A E+ + +G
Sbjct: 424 VVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKG 483
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
T L+ G G++ EA I+ E + + +TY+ LI G+C + +
Sbjct: 484 SPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCF 543
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLC--------LKALDWRTAEKLLEDMRLKGLHLNGI 515
+L EM G+QP++ YN L++ LC +K D A L+ ++ G+ + G
Sbjct: 544 RLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGY 603
Query: 516 TRA 518
+A
Sbjct: 604 CKA 606
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 122/283 (43%), Gaps = 3/283 (1%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
F LG A +VF G + +T F + +L + F+ V M E G+ PD
Sbjct: 185 FRNLG-FSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSE-GACPD 242
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
+I+ CKGGK + A ++ + + P +I+ LCQ + A ++
Sbjct: 243 VFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGR-LDNAFELK 301
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
+ + + + +K + ++I L ++ +L +MI G P VFN++I Y K
Sbjct: 302 EKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKM 361
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
G++ A+++ +M S+ + P T LM G+ Q+E A L E + + P
Sbjct: 362 GNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNC 421
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
++++ CK + A + M +P+ L+ LC
Sbjct: 422 YSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLC 464
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 108/226 (47%), Gaps = 4/226 (1%)
Query: 288 VVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRS 347
V Y LAR K +P FL+SSL + +E K ++ S E + F++VI +
Sbjct: 196 VFYLLAR-KGTFPSLKTCNFLLSSLVKANEFEKCC-EVFRVMS-EGACPDVFSFTNVINA 252
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
LC+ + A L KM G P +N +I+ + G + A E+ + M +G++P+
Sbjct: 253 LCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPN 312
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
+ TY L++G ++ +L+E + + V ++ LI GYCK+ + ALK+ +
Sbjct: 313 LKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKD 372
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
M + P L+Q C K+ AE LE++ GL ++
Sbjct: 373 VMISKNITPTSVTLYSLMQGFC-KSDQIEHAENALEEILSSGLSIH 417
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 88/178 (49%), Gaps = 4/178 (2%)
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG 422
+++SEG P F +VI+A K G M A+E+ M G+ P+V TY +++G G
Sbjct: 233 RVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNG 292
Query: 423 QMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
+++ A E+ + + + TY LI G KL FD +L+EM G PNV +N
Sbjct: 293 RLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFN 352
Query: 483 KLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAVKELEEDAIENGEALVE 539
LI C K + A K+ + M K + +T +L++ + D IE+ E +E
Sbjct: 353 NLIDGYC-KMGNIEGALKIKDVMISKNITPTSVTLYSLMQGF--CKSDQIEHAENALE 407
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 32/186 (17%), Positives = 73/186 (39%), Gaps = 1/186 (0%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+ N +I + G AA ++ G + N TY I + + + A + ++M
Sbjct: 630 VYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEM 689
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+ G +P+ +I +CK G+ A + ++P + +I C+
Sbjct: 690 RKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNM 749
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
K A ++L + ++ + C+ D+ A + +M +EG P + +
Sbjct: 750 EK-ANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTT 808
Query: 379 VISAYS 384
++ ++
Sbjct: 809 LVHGWN 814
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 165/393 (41%), Gaps = 59/393 (15%)
Query: 141 TPLVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEIL 200
TPL+ G +C K TS +D +L+ + +V++ +++K + ++ + +E+L
Sbjct: 131 TPLLKG---LCADKR-TSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELL 186
Query: 201 ------------------NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEAL 242
N ++ F K G A+ +++ D G + + TY I AL
Sbjct: 187 HMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAAL 246
Query: 243 SRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQ 302
+ + D A V M++ G +PD I+ +C G+ KEA R + P
Sbjct: 247 CKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNV 306
Query: 303 SVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLS 362
+ L++ LC+ S EARK +
Sbjct: 307 VTYSSLMNYLCKNGR------------STEARK------------------------IFD 330
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG 422
M G P A + +++ Y+ G + +L LM G++PD + + L+ YA
Sbjct: 331 SMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQE 390
Query: 423 QMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
++++A + ++ +++ + V Y T+I CK D A+ +M D G+ PN+ Y
Sbjct: 391 KVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYT 450
Query: 483 KLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
LI LC W AE+L+ +M +G+ LN I
Sbjct: 451 SLIHGLC-TCDKWDKAEELILEMLDRGICLNTI 482
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 149/332 (44%), Gaps = 10/332 (3%)
Query: 163 ALLKAICSSVGKKEV--YALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVF 220
A+L C G+ ++ AL ++VK+ G + + +L L A A V
Sbjct: 96 AILIGCCCRAGRLDLGFAALGNVVKK-GFRVDAITFTPLLKGLCA---DKRTSDAMDIVL 151
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET---GSLPDSEKVGKIISWF 277
+ + GC+ + +Y ++ L A + M + GS PD +++ F
Sbjct: 152 RRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGF 211
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
K G + +A+ Y ++ + P + +I++LC+ K A+++L+
Sbjct: 212 FKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDK-AMEVLNTMVKNGVMPD 270
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
++S++ C A L KM S+G P ++S+++ K G T A ++
Sbjct: 271 CMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFD 330
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M RGL+PD+ TY L+ GYA G + E +L+ +N + ++ LI Y K E
Sbjct: 331 SMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQE 390
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ D A+ + ++M+ G+ PNV Y +I LC
Sbjct: 391 KVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLC 422
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 138/304 (45%), Gaps = 15/304 (4%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G + + I A ++++ D A V KM + G P+ G +I CK G +A
Sbjct: 371 GIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDA 430
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLC---QEDETVKLALDMLDDFSGEARKYAIKP--F 341
+ + ++ + P V LI LC + D+ +L L+MLD R + F
Sbjct: 431 MLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLD------RGICLNTIFF 484
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+S+I S C+ V ++ L M+ G P +N++I AG M A ++L M S
Sbjct: 485 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVS 544
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+KPD+ TY L++GY +M++A + E + + +TY+ +++G
Sbjct: 545 VGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAA 604
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD---WRTAEKL-LEDMRLKGLHLNGITR 517
A +L + G Q + YN ++ LC L R + L L D++L+ N +
Sbjct: 605 AKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 664
Query: 518 ALIR 521
AL++
Sbjct: 665 ALLK 668
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 120/285 (42%), Gaps = 8/285 (2%)
Query: 215 AAFEVFNKFGDYGC---VANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVG 271
AA +N+ G TY I R D ++ +++ G D+
Sbjct: 72 AAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFT 131
Query: 272 KIISWFCKGGKAKEA-HVVYTLAREKKMYPPQSVVAFLISSLCQED---ETVKLALDMLD 327
++ C + +A +V E P L+ LC E+ E ++L L M+
Sbjct: 132 PLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALEL-LHMMA 190
Query: 328 DFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG 387
D G + +++V+ + D A + +M+ G P ++S+I+A KA
Sbjct: 191 DDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQ 250
Query: 388 DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYH 447
M AME+L M G+ PD TY ++ GY + GQ +EA L + + + + VTY
Sbjct: 251 AMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYS 310
Query: 448 TLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
+L+ CK A K+ + M G++P++ Y L+Q K
Sbjct: 311 SLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKG 355
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 133/364 (36%), Gaps = 46/364 (12%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
LL+ + E++AL D++ G + + N LI ++K K A VF+K
Sbjct: 346 TLLQGYATKGALVEMHALLDLMVRNGIQPDH----HVFNILICAYAKQEKVDQAMLVFSK 401
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD---------------- 266
+G N Y I+ L + D A E+MI+ G P+
Sbjct: 402 MRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDK 461
Query: 267 ---SEKV----------------GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF 307
+E++ II CK G+ E+ ++ L + P
Sbjct: 462 WDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNT 521
Query: 308 LISSLC---QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM 364
LI C + DE KL M+ K I + ++I CR+ + A L +M
Sbjct: 522 LIDGCCLAGKMDEATKLLASMV----SVGVKPDIVTYGTLINGYCRVSRMDDALALFKEM 577
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
+S G P +N ++ A E+ + G + ++ TY ++ G
Sbjct: 578 VSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLT 637
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
+EA + +L T++ +I K D A L G+ P+V Y+ +
Sbjct: 638 DEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLM 697
Query: 485 IQSL 488
++L
Sbjct: 698 AENL 701
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/274 (18%), Positives = 105/274 (38%), Gaps = 4/274 (1%)
Query: 181 WDIVKEIGEK--EKGV-LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYF 237
WD +E+ + ++G+ L N +I K G+ + ++F+ G + TY
Sbjct: 462 WDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNT 521
Query: 238 TIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKK 297
I+ D A + M+ G PD G +I+ +C+ + +A ++
Sbjct: 522 LIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSG 581
Query: 298 MYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGA 357
+ P ++ L T A ++ + + + ++ ++ LC+ A
Sbjct: 582 VSPNIITYNIILQGLFHTRRTAA-AKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEA 640
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
+ + FN +I A K G M A ++ + GL PDV TY+ +
Sbjct: 641 LRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAEN 700
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
G +EE ++ ++N ++++R
Sbjct: 701 LIEQGSLEELDDLFLSMEENGCSADSRMLNSIVR 734
>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
Length = 792
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 168/395 (42%), Gaps = 46/395 (11%)
Query: 156 VTSGVVDA-----LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKL 210
V +GV D L+ +C E LWD +KE G K ++ + L+ + +
Sbjct: 388 VDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKP----SIVTYHSLLLGYCEK 443
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWS----------------- 253
G+ A +++++ D G N+ TY ++ ++K FD A++
Sbjct: 444 GRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTY 503
Query: 254 ------------VCE------KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE 295
VCE + + G +P + II+ F K G A +Y R+
Sbjct: 504 NILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRK 563
Query: 296 KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVH 355
K + P I C+ + LA+ +L + + I +++ I + C+ ++
Sbjct: 564 KGITPNIVTYTSFIDGYCRTN-CCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMS 622
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
A L ++ +G P V+NS ++ Y M A + M + + D YT L+
Sbjct: 623 RALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLI 682
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
G++ G + A E+ +E NH T+ L G C+ + D A +LL++M+ + V
Sbjct: 683 DGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVS 742
Query: 476 PNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
PN+ YN LI + C++ + A +L ++M G+
Sbjct: 743 PNIVTYNMLINA-CVRDGKLQEAFQLHDEMLSSGV 776
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 151/371 (40%), Gaps = 52/371 (14%)
Query: 158 SGVVDALLKAICSSVGK-KEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA 216
S VVD L+K VG+ E L D + K+ V+ +L L ++GK A
Sbjct: 259 SSVVDVLVK-----VGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGK---A 310
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL------------ 264
++F++ G TY I+ + D + +C +MIE G L
Sbjct: 311 LDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKG 370
Query: 265 ----------------------PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQ 302
PD G +I W CK K EA ++ +E + P
Sbjct: 371 LLRDKRWKDAIGLLELVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSI 430
Query: 303 SVVAFLISSLCQE---DETVKLALDMLDD-FSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
L+ C++ DE +KL +M D F Y +++++ + K A
Sbjct: 431 VTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTY-----TTLMKGYIKKKAFDNAY 485
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
LL++M G G+ +N +I+ + EMLK S G P TY +++G+
Sbjct: 486 ALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGF 545
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G M A + + +K + VTY + I GYC+ D A+KLL ++ G+QP++
Sbjct: 546 VKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDI 605
Query: 479 DEYNKLIQSLC 489
YN I + C
Sbjct: 606 AAYNAFIDTFC 616
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 119/249 (47%), Gaps = 5/249 (2%)
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M+ G +PD++ ++ +G A +A ++ R K Y + +I + C
Sbjct: 140 RMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRA-CVRG 198
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
A+ + D+ +G K + ++ I LC+++D A +L KM G P +
Sbjct: 199 GMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTY 258
Query: 377 NSVISAYSKAGDMTPAMEML-KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+SV+ K G M A+ + +++ + G K DV T LM GY G++ +A ++ +E
Sbjct: 259 SSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVV 318
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEF-DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
+ + VTY LI+G C E D KL +M + G+ + E+N +I+ L L+
Sbjct: 319 SDGVTPTNVTYGVLIKG-CDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGL-LRDKR 376
Query: 495 WRTAEKLLE 503
W+ A LLE
Sbjct: 377 WKDAIGLLE 385
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 108/265 (40%), Gaps = 9/265 (3%)
Query: 191 EKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDW 250
E V T N +I F K G +AF ++ + G N TY I+ R D
Sbjct: 529 EGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDL 588
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A + + G PD I FCK G A L + + P +V ++
Sbjct: 589 AVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVT 648
Query: 311 ---SLCQEDETVKLALDMLDDFSGEARKYA-IKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
+L E K M+ + R A + ++++I ++ +V A L S+M++
Sbjct: 649 GYKNLKMMAEASKFYYSMI-----KQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMA 703
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
P + F ++ ++GD+ A +L MR + P++ TY L++ G+++E
Sbjct: 704 NHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQE 763
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIR 451
A ++ +E + TY L R
Sbjct: 764 AFQLHDEMLSSGVVPDDTTYDILPR 788
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 55/127 (43%)
Query: 362 SKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG 421
S+M++ G P ++ ++ A+ + MR +G D Y ++ G
Sbjct: 139 SRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRG 198
Query: 422 GQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEY 481
G +A + +E + Y I G CKL + D AL++L +M++ G +P Y
Sbjct: 199 GMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTY 258
Query: 482 NKLIQSL 488
+ ++ L
Sbjct: 259 SSVVDVL 265
>gi|125562258|gb|EAZ07706.1| hypothetical protein OsI_29963 [Oryza sativa Indica Group]
Length = 465
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 157/408 (38%), Gaps = 56/408 (13%)
Query: 116 DGYLESSLDSFELD--LHEDFVLKVLET-----PLVLGENLVCFFKWVTS-----GVVDA 163
D YLE +L+ L D L+V+ PL + F W+ + D
Sbjct: 65 DFYLERTLNRLRLPSPFPPDLALRVIRAAAPAEPL----HAARFLAWLRAKPSFAASADH 120
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGV-LTVEILNELIALFSKLGKGKAAFEVFNK 222
+ + LW + ++ + G+ L+ + +I+ + + A EVFN+
Sbjct: 121 FDALLLPLARARLFTHLWSLAADM--RALGLPLSPSTFSAVISSYGQSRLTDQAVEVFNR 178
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+GC + Y ++AL F A+ + +M G PD ++ +C GK
Sbjct: 179 LPRFGCPQTTQVYNALLDALCANGSFAGAYKLLRRMARKGVAPDRATFSTLVDAWCAAGK 238
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+EA E+ +PP D+L D
Sbjct: 239 LREAQAFLDDMAERGFHPPVR------------------GRDLLVD-------------- 266
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
L R + AK +M EG P A FNS+ A +GD+ A+ +L SR
Sbjct: 267 ----GLVRAGRLEEAKAFALRMTKEGVLPDVATFNSLAEALCSSGDVEFAVALLADASSR 322
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
GL PD+ TY ++ A G+++EA + A ++ R P Y +I+ CK F A
Sbjct: 323 GLCPDISTYKVMIPAVAKAGRIDEAFRLFYAALEDGHRPFPSLYAAIIKALCKAGRFADA 382
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+MK G PN Y L++ +C++ + A L +M G
Sbjct: 383 FAFFGDMKSKGHPPNRPVYVMLVK-MCVRGGRFVEAANYLVEMSEAGF 429
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 10/129 (7%)
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
MR+ GL T++ ++S Y ++A E+ N + + Y+ L+ C
Sbjct: 144 MRALGLPLSPSTFSAVISSYGQSRLTDQAVEVFNRLPRFGCPQTTQVYNALLDALCANGS 203
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH------- 511
F A KLL M GV P+ ++ L+ + C A R A+ L+DM +G H
Sbjct: 204 FAGAYKLLRRMARKGVAPDRATFSTLVDAWC-AAGKLREAQAFLDDMAERGFHPPVRGRD 262
Query: 512 --LNGITRA 518
++G+ RA
Sbjct: 263 LLVDGLVRA 271
>gi|125604075|gb|EAZ43400.1| hypothetical protein OsJ_28005 [Oryza sativa Japonica Group]
Length = 461
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 157/408 (38%), Gaps = 56/408 (13%)
Query: 116 DGYLESSLDSFELD--LHEDFVLKVLET-----PLVLGENLVCFFKWVTS-----GVVDA 163
D YLE +L+ L D L+V+ PL + F W+ + D
Sbjct: 61 DFYLERTLNRLRLPSPFPPDLALRVIRAAAPAEPL----HAARFLAWLRAKPSFAASADH 116
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGV-LTVEILNELIALFSKLGKGKAAFEVFNK 222
+ + LW + ++ + G+ L+ + +I+ + + A EVFN+
Sbjct: 117 FDALLLPLARARLFTHLWSLAADM--RALGLPLSPSTFSAVISSYGQSRLTDQAVEVFNR 174
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+GC + Y ++AL F A+ + +M G PD ++ +C GK
Sbjct: 175 LPRFGCPQTTQVYNALLDALCANGSFAGAYKLLRRMARKGVAPDRATFSTLVDAWCAAGK 234
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+EA E+ +PP D+L D
Sbjct: 235 LREAQAFLDDMAERGFHPPVR------------------GRDLLVD-------------- 262
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
L R + AK +M EG P A FNS+ A +GD+ A+ +L SR
Sbjct: 263 ----GLVRAGRLEEAKAFALRMTKEGVLPDVATFNSLAEALCSSGDVEFAVALLADASSR 318
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
GL PD+ TY ++ A G+++EA + A ++ R P Y +I+ CK F A
Sbjct: 319 GLCPDISTYKVMIPAVAKAGRIDEAFRLFYAALEDGHRPFPSLYAAIIKALCKAGRFADA 378
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+MK G PN Y L++ +C++ + A L +M G
Sbjct: 379 FAFFGDMKSKGHPPNRPVYVMLVK-MCVRGGRFVEAANYLVEMSEAGF 425
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 10/129 (7%)
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
MR+ GL T++ ++S Y ++A E+ N + + Y+ L+ C
Sbjct: 140 MRALGLPLSPSTFSAVISSYGQSRLTDQAVEVFNRLPRFGCPQTTQVYNALLDALCANGS 199
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH------- 511
F A KLL M GV P+ ++ L+ + C A R A+ L+DM +G H
Sbjct: 200 FAGAYKLLRRMARKGVAPDRATFSTLVDAWC-AAGKLREAQAFLDDMAERGFHPPVRGRD 258
Query: 512 --LNGITRA 518
++G+ RA
Sbjct: 259 LLVDGLVRA 267
>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
Length = 735
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 136/314 (43%), Gaps = 2/314 (0%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
+ + G A VF GC+ TY + L + A +V M PD
Sbjct: 117 YCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPD 176
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
+ ++ C+ G+ +EA V+ A P V LI C E ++ AL +
Sbjct: 177 THVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGE-MEHALKVF 235
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
+ G ++ ++ +I LC+ V A L S+M+ G P + ++I
Sbjct: 236 EGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNE 295
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
G + A +L LM + GL P+ +T++ L+ ++EEA L K +++ V Y
Sbjct: 296 GHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVY 355
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
+LI G CK + D A +L+ +M G P+ Y+ LI LC + A +LEDM
Sbjct: 356 TSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLC-RQKKLSQATLMLEDMM 414
Query: 507 LKGLHLNGITRALI 520
KG+ + +T +I
Sbjct: 415 EKGIQASPVTYTII 428
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 154/386 (39%), Gaps = 59/386 (15%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+ + N LI + G+ + A +VF C N TY I L + + A +
Sbjct: 212 IVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFS 271
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M+E G P+ +I C G + A + L + P + LI +LC+ +
Sbjct: 272 RMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKRE 331
Query: 317 ETVKLALDMLDDFSGEARKYAIK----PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
+ + L F G K +K ++S+I LC+ + A L+ KMISEG P
Sbjct: 332 KVEEAQL-----FLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPD 386
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK--------------------------- 405
++S+I + ++ A ML+ M +G++
Sbjct: 387 AHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFD 446
Query: 406 --------PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
PD+ TYT + Y G+ME+A ++ + + VTY+TLIRGY L
Sbjct: 447 KMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLG 506
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD------WRTAEK-----LLEDMR 506
A M G +PN D Y L++ + K+ W+ A+ LLED+
Sbjct: 507 LVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDIT 566
Query: 507 LKGLHLNG-ITRALIRA---VKELEE 528
+ L L I IR V LEE
Sbjct: 567 ERQLPLAADIYSCFIRCLCRVDRLEE 592
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 121/286 (42%), Gaps = 2/286 (0%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
N TY I A A ++ G PDS + +C+ G A V+
Sbjct: 71 NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
L + L+ L V+ A+ + ++ +++++ LC
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAG-MVREAMAVFVGMRADSCAPDTHVYATMVHGLCE 189
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
A+ LL + +S G P V+N++I Y AG+M A+++ + M P+V T
Sbjct: 190 AGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRT 249
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
YT L+ G G++E A + + + + VTY LI+G C CA +LL+ M+
Sbjct: 250 YTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLME 309
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
G+ PN ++ LI +LC K A+ L + KG+ +N +
Sbjct: 310 TNGLVPNDWTFSVLIDALC-KREKVEEAQLFLGSLVKKGVKVNEVV 354
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 134/331 (40%), Gaps = 53/331 (16%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G N+ Y I+ L + D A + +KMI G +PD+ +I C+ K +A
Sbjct: 347 GVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQA 406
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQE--DETVKLALDMLDDFSGEARKYAIKPFSSV 344
++ EK + +I L +E E K + D I ++
Sbjct: 407 TLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPK---KIFDKMIATGINPDIVTYTVF 463
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
+RS C + A++++ +M+ G P +N++I Y+ G ++ A ++M +G
Sbjct: 464 VRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGW 523
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEI---------------------------------- 430
KP+ +YT L+ + + +I
Sbjct: 524 KPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRC 583
Query: 431 ------LNEAKK-----NHSRLSPV--TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
L EAK ++ L+P Y ++I C+L+ AL LL+ M G P+
Sbjct: 584 LCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPH 643
Query: 478 VDEYNKLIQSLCLKALDWRTAEKLLEDMRLK 508
++ Y +I SLC + ++RTA+++ D+ LK
Sbjct: 644 LESYRIIISSLC-EGGNFRTAKEVFGDLLLK 673
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 139/338 (41%), Gaps = 17/338 (5%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
L+ +C S + L+ + E G E V+T LI G + AF + +
Sbjct: 253 LIHGLCKSGKVERAMVLFSRMVEAG-LEPNVVTY---TALIQGQCNEGHLQCAFRLLHLM 308
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
G V N T+ I+AL +R+ + A +++ G + +I CK GK
Sbjct: 309 ETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKI 368
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
A + + P + LI LC++ + + L ML+D + + + ++
Sbjct: 369 DAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATL-MLEDMMEKGIQASPVTYTI 427
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
+I L R G K + KMI+ G P + + +Y + G M A M+ M RG
Sbjct: 428 IIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRG 487
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
+ P++ TY L+ GYAN G + +A + + +Y L+R K D ++
Sbjct: 488 VFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSV 547
Query: 464 KL--LNEMKDVGV----------QPNVDEYNKLIQSLC 489
+ + +MKD+ V D Y+ I+ LC
Sbjct: 548 DIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLC 585
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 134/337 (39%), Gaps = 22/337 (6%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L+ +C + + + + E G + V I++EL+ G K +F+K
Sbjct: 392 SLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKK----IFDK 447
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + TY + + + A S+ +M++ G P+ +I + G
Sbjct: 448 MIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGL 507
Query: 283 AKEAHVVYTLAREKKMYPPQ---SVVAFLISSLCQEDETVKL--ALDM------LDDFSG 331
+A + + K P + +V+ L+ D +V + DM L+D +
Sbjct: 508 VSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITE 567
Query: 332 EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
A +S IR LCR+ + AK M + P V+ S+I + +T
Sbjct: 568 RQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTD 627
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
A+ +L M G P + +Y ++S GG A E+ + S + + LI
Sbjct: 628 ALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIY 687
Query: 452 GYCK---LEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
G + + EF LL+ MK+ G QP+ + N +I
Sbjct: 688 GLLQKGSVAEFS---SLLSVMKEHGYQPS-NTINAMI 720
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 4/152 (2%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
++ ++++ +L R + ++L S+M P + ++I+AY AGD+ A + L
Sbjct: 41 LRCLNTLLMALARHRMFPDMESLASRM----PARNLRTYTTLINAYCLAGDIPAAKQHLT 96
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
+ GL PD Y YT + GY G + AC + + TY L+ G
Sbjct: 97 SLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAG 156
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A+ + M+ P+ Y ++ LC
Sbjct: 157 MVREAMAVFVGMRADSCAPDTHVYATMVHGLC 188
>gi|302820365|ref|XP_002991850.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
gi|300140388|gb|EFJ07112.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
Length = 425
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 147/319 (46%), Gaps = 16/319 (5%)
Query: 174 KKEVYALWDIVKEIGEKEKGVLTVEILNELI------------ALFSKLGKGKA---AFE 218
K Y +++ + + VL +E+L+++I + LGK A +
Sbjct: 46 KPNAYTYKCVIQSLVKAGNVVLAMELLDKMIKTGLEPDTLLCNVVLDGLGKANMMDEACK 105
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+F GC A+ TY I +L R K + A + ++M E G P + +I +C
Sbjct: 106 LFASMKSMGCPADDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYC 165
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
K G+ + A VV +K + P + LI+++ + T +LA ++ +
Sbjct: 166 KAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRT-ELACEIFERMKKSGVAVNT 224
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
F++++ + V A + +M + G P + FN++I+ +A + A ++L+
Sbjct: 225 VSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQE 284
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
MRS GL PDV+TYT ++ +A G M +A E+ + +K + VTY+ LI K
Sbjct: 285 MRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGR 344
Query: 459 FDCALKLLNEMKDVGVQPN 477
+ A + +MK G+ P+
Sbjct: 345 YQDARDIYFDMKKKGILPD 363
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 150/328 (45%), Gaps = 10/328 (3%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V + N +IA + + + + F + +G N TY I++L + A + +
Sbjct: 14 VLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMELLD 73
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS--VVAFLISSL-- 312
KMI+TG PD+ ++ K EA ++ A K M P A LI SL
Sbjct: 74 KMIKTGLEPDTLLCNVVLDGLGKANMMDEACKLF--ASMKSMGCPADDYTYAILIRSLGR 131
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
C+ DE L D +++ A +++VI C+ + A +L KM+ + P
Sbjct: 132 CKRDEEATLLFDEMEERGCTPSAPA---YTNVIDIYCKAGRIESAMVVLKKMLDKNLAPD 188
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+ NS+I+A S+ G A E+ + M+ G+ + ++ ++ G++ A + ++
Sbjct: 189 DYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMD 248
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
E + + + +T++TLI + + A K+L EM+ G+ P+V Y +I++ KA
Sbjct: 249 EMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFA-KA 307
Query: 493 LDWRTAEKLLEDMRLKGLHLNGITRALI 520
+ A ++ DM G N +T L+
Sbjct: 308 GNMGKAFEMFGDMEKAGCSANVVTYNLL 335
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 87/192 (45%), Gaps = 6/192 (3%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
+Y + ++VI + R +H ++ G P + VI + KAG++ AME
Sbjct: 11 RYHVLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAME 70
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR--G 452
+L M GL+PD ++ G M+EAC++ K TY LIR G
Sbjct: 71 LLDKMIKTGLEPDTLLCNVVLDGLGKANMMDEACKLFASMKSMGCPADDYTYAILIRSLG 130
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
CK +E A L +EM++ G P+ Y +I C KA +A +L+ M K L
Sbjct: 131 RCKRDEE--ATLLFDEMEERGCTPSAPAYTNVIDIYC-KAGRIESAMVVLKKMLDKNLAP 187
Query: 513 NGIT-RALIRAV 523
+ T +LI AV
Sbjct: 188 DDYTLNSLITAV 199
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 143/313 (45%), Gaps = 10/313 (3%)
Query: 180 LWDIVKEI--GEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYF 237
+ +++KE+ G E V T IL + ++ + K ++ F+ + G + Y++
Sbjct: 187 VAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAG-----DVYFY 241
Query: 238 T--IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE 295
+ I A R A V ++ + G P+ G +I+ FCK G+ + A ++ T +
Sbjct: 242 SAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQL 301
Query: 296 KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVH 355
+ + Q + +I C+ V AL++ + + ++++ LCR+ +
Sbjct: 302 RGVGHNQIIFNTMIDGYCRHG-MVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRME 360
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
AK LL M G + ++IS +SK GDM A + + M +G +P V TY ++
Sbjct: 361 DAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMI 420
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
GY G + EA E +K TY L+ G+C + D AL+L EMK G +
Sbjct: 421 DGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAK 480
Query: 476 PNVDEYNKLIQSL 488
PNV Y LI L
Sbjct: 481 PNVVAYTALISGL 493
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 141/342 (41%), Gaps = 37/342 (10%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
F K G+ A + ++ +G N Y ++ +R+K V ++M G P
Sbjct: 143 FCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGGVEPT 202
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
++ G + V+ + K + + +I++ C+ V+ A ++
Sbjct: 203 VGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAG-NVRRASEVF 261
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
D+ G + + + ++I C++ + A+ LL+ M G +FN++I Y +
Sbjct: 262 DECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRH 321
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN-------------- 432
G + A+E+ +M G++ DVYTY L G +ME+A ++L+
Sbjct: 322 GMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSY 381
Query: 433 --------------EAKK-------NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
EA++ SR S VTY+ +I GY K A + EM+
Sbjct: 382 TTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEK 441
Query: 472 VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
G+ P+V Y L+ C+ A +L E+M+ +G N
Sbjct: 442 KGLVPDVYTYAALVHGHCVNG-KVDVALRLFEEMKQRGAKPN 482
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 85/180 (47%), Gaps = 3/180 (1%)
Query: 338 IKPFSS--VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
I P S+ V+ C+ + A+ LL +M G +N ++ Y++ + E+
Sbjct: 131 ITPLSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEV 190
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
LK M S G++P V TYT L+ G + G + + + +E K+ + Y +I YC+
Sbjct: 191 LKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCR 250
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
A ++ +E G++PN Y LI C K AE LL DM+L+G+ N I
Sbjct: 251 AGNVRRASEVFDECVGNGIEPNERTYGALINGFC-KIGQIEAAEMLLTDMQLRGVGHNQI 309
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 123/260 (47%), Gaps = 2/260 (0%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
++ FCK G+ +A + + L+ + ++ ++A ++L +
Sbjct: 139 VVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVA-EVLKEMESG 197
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
+ + ++ ++ L D+ +++ ++ + +++VI+AY +AG++ A
Sbjct: 198 GVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRA 257
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
E+ G++P+ TY L++G+ GQ+E A +L + + + + ++T+I G
Sbjct: 258 SEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDG 317
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
YC+ D AL++ M+ +G+Q +V YN L LC + A+KLL M G+
Sbjct: 318 YCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLC-RVNRMEDAKKLLHIMTENGVES 376
Query: 513 NGITRALIRAVKELEEDAIE 532
N ++ + ++ E D +E
Sbjct: 377 NYVSYTTLISIHSKEGDMVE 396
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 65/137 (47%), Gaps = 4/137 (2%)
Query: 371 PGNAV---FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
P +AV + + AY+ AG A E L L SR D + T + G + A
Sbjct: 57 PRHAVASFHDMLFRAYADAGAPDRAAEALDLTVSRLGSLDPRSLTSSLLSLRRTGHLLPA 116
Query: 428 CEILNEAKKN-HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
E+L +A + ++P++ ++ G+CK D A +LL+EM GV+ N YN L+
Sbjct: 117 AELLRKALASCPGCITPLSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLD 176
Query: 487 SLCLKALDWRTAEKLLE 503
+ + D R AE L E
Sbjct: 177 TYTRQKNDARVAEVLKE 193
>gi|240255563|ref|NP_190542.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546755|sp|P0C8A0.1|PP275_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49730
gi|332645062|gb|AEE78583.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 176/403 (43%), Gaps = 9/403 (2%)
Query: 92 KEEEAYEIDGDKLENVLSLLQSSVDGYLESSLDSFELDLHEDFVLKVLETPLVLGENLVC 151
K E+ + + +K+ +L S V LE +L+ +DL +++VL G
Sbjct: 58 KHEDEFAGEVEKIYRILRNHHSRVPK-LELALNESGIDLRPGLIIRVLSRCGDAGNLGYR 116
Query: 152 FFKWVTSGVVDALLKAICSSV-----GKKEVYALWDIVKEIGEKEKGVLTVEILNELIAL 206
FF W T +C S+ ++ A+W +++E+ + ++ E+ L+
Sbjct: 117 FFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRR 176
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
F+ K A EV ++ YG ++ + ++AL + A V E M E P+
Sbjct: 177 FASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFP-PN 235
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
++ +C+ GK EA V +E + P V L+S + A D++
Sbjct: 236 LRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMAD-AYDLM 294
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRM-KDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSK 385
+D + + ++ +I++LCR K + A + +M G + ++IS + K
Sbjct: 295 NDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCK 354
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
G + +L MR +G+ P TY +M + Q EE E++ + K+ +
Sbjct: 355 WGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLI 414
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
Y+ +IR CKL E A++L NEM+ G+ P VD + +I
Sbjct: 415 YNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGF 457
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 127/258 (49%), Gaps = 20/258 (7%)
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAI 338
K ++ V+ L E + P+ + L L + VK A+++LD E KY +
Sbjct: 143 KMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLD----EMPKYGL 198
Query: 339 KP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
+P F ++ +LC+ V A + M E PP F S++ + + G + A E
Sbjct: 199 EPDEYVFGCLLDALCKNGSVKEASKVFEDM-REKFPPNLRYFTSLLYGWCREGKLMEAKE 257
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+L M+ GL+PD+ +T L+SGYA+ G+M +A +++N+ +K + Y LI+ C
Sbjct: 258 VLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALC 317
Query: 455 KLEE-FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK---LLEDMRLKGL 510
+ E+ D A+++ EM+ G + ++ Y LI C W +K +L+DMR KG+
Sbjct: 318 RTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFC----KWGMIDKGYSVLDDMRKKGV 373
Query: 511 HLNGITRALIRAVKELEE 528
+ +T I E +E
Sbjct: 374 MPSQVTYMQIMVAHEKKE 391
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 124/297 (41%), Gaps = 6/297 (2%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSR-RKIFDWAWSVC 255
+ + L++ ++ GK A+++ N G N Y I+AL R K D A V
Sbjct: 271 IVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVF 330
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+M G D +IS FCK G + + V R+K + P Q V I ++
Sbjct: 331 VEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQ-VTYMQIMVAHEK 389
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
E + L++++ + ++ VIR C++ +V A L ++M + G PG
Sbjct: 390 KEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDT 449
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGL--KPDVYTYTGLMSGYANGGQMEEACEILN- 432
F +I+ ++ G + A K M SRG+ P T L++ ++E A ++ +
Sbjct: 450 FVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSC 509
Query: 433 -EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
K + L+ + I A +M ++ + P + Y KL++ L
Sbjct: 510 ISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGL 566
>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
Length = 792
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 168/395 (42%), Gaps = 46/395 (11%)
Query: 156 VTSGVVDA-----LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKL 210
V +GV D L+ +C E LWD +KE G K ++ + L+ + +
Sbjct: 388 VDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKP----SIVTYHSLLLGYCEK 443
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWS----------------- 253
G+ A +++++ D G N+ TY ++ ++K FD A++
Sbjct: 444 GRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTY 503
Query: 254 ------------VCE------KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE 295
VCE + + G +P + II+ F K G A +Y R+
Sbjct: 504 NILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRK 563
Query: 296 KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVH 355
K + P I C+ + LA+ +L + + I +++ I + C+ ++
Sbjct: 564 KGITPNIVTYTSFIDGYCRTN-CCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMS 622
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
A L ++ +G P V+NS ++ Y M A + M + + D YT L+
Sbjct: 623 RALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLI 682
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
G++ G + A E+ +E NH T+ L G C+ + D A +LL++M+ + V
Sbjct: 683 DGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVS 742
Query: 476 PNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
PN+ YN LI + C++ + A +L ++M G+
Sbjct: 743 PNIVTYNMLINA-CVRDGKLQEAFQLHDEMLSSGV 776
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 129/283 (45%), Gaps = 10/283 (3%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G +++ + + G + + + I+ L R K + A + + +++TG +PD
Sbjct: 340 GMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTG-VPDVFTY 398
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLD 327
G +I W CK K EA ++ +E + P L+ C++ DE +KL +M D
Sbjct: 399 GCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPD 458
Query: 328 D-FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
F Y +++++ + K A LL++M G G+ +N +I+
Sbjct: 459 KGFPPNEVTY-----TTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMV 513
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
+ EMLK S G P TY +++G+ G M A + + +K + VTY
Sbjct: 514 NRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTY 573
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ I GYC+ D A+KLL ++ G+QP++ YN I + C
Sbjct: 574 TSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFC 616
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 144/344 (41%), Gaps = 48/344 (13%)
Query: 208 SKLGKGKA-AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
+ LG A A +F++ GC A+ + Y I A R + A + ++M G PD
Sbjct: 160 TALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPD 219
Query: 267 SEKVGKIISWFCK----------GGKAKEA----------HVVYTLAREKKM-----YPP 301
IS CK GK +EA VV L + ++M
Sbjct: 220 ERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVRRMDEALRLKD 279
Query: 302 QSVVA-----------FLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
Q ++A L+ C E K ALD+ D+ + + P + L +
Sbjct: 280 QMLLATGKKMDVVLATMLMHGYCLNGEVGK-ALDLFDEVVSD----GVTPTNVTYGVLIK 334
Query: 351 MKDVHGAK----TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
D G L +MI +G P FN VI + A+ +LKL+ G+ P
Sbjct: 335 GCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGV-P 393
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
DV+TY L+ ++ EA + ++ K+ + S VTYH+L+ GYC+ D ALKL
Sbjct: 394 DVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLY 453
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+EM D G PN Y L++ +K + A LL +MR G+
Sbjct: 454 SEMPDKGFPPNEVTYTTLMKGY-IKKKAFDNAYALLNEMRQNGV 496
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 118/249 (47%), Gaps = 5/249 (2%)
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M+ G +PD++ ++ G A +A ++ R K Y + +I + C
Sbjct: 140 RMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRA-CVRG 198
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
A+ + D+ +G K + ++ I LC+++D A +L KM G P +
Sbjct: 199 GMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTY 258
Query: 377 NSVISAYSKAGDMTPAMEML-KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+SV+ K M A+ + +++ + G K DV T LM GY G++ +A ++ +E
Sbjct: 259 SSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVV 318
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEF-DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
+ + VTY LI+G C E D KL +M + G+ P+ E+N +I+ L L+
Sbjct: 319 SDGVTPTNVTYGVLIKG-CDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGL-LRDKR 376
Query: 495 WRTAEKLLE 503
W+ A LL+
Sbjct: 377 WKDAIGLLK 385
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 108/265 (40%), Gaps = 9/265 (3%)
Query: 191 EKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDW 250
E V T N +I F K G +AF ++ + G N TY I+ R D
Sbjct: 529 EGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDL 588
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A + + G PD I FCK G A L + + P +V ++
Sbjct: 589 AVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVT 648
Query: 311 ---SLCQEDETVKLALDMLDDFSGEARKYA-IKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
+L E K M+ + R A + ++++I ++ +V A L S+M++
Sbjct: 649 GYKNLKMMAEASKFYYSMI-----KQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMA 703
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
P + F ++ ++GD+ A +L MR + P++ TY L++ G+++E
Sbjct: 704 NHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQE 763
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIR 451
A ++ +E + TY L R
Sbjct: 764 AFQLHDEMLSSGVVPDDTTYDILPR 788
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 54/127 (42%)
Query: 362 SKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG 421
S+M++ G P ++ + A+ + MR +G D Y ++ G
Sbjct: 139 SRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRG 198
Query: 422 GQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEY 481
G +A + +E + Y I G CKL + D AL++L +M++ G +P Y
Sbjct: 199 GMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTY 258
Query: 482 NKLIQSL 488
+ ++ L
Sbjct: 259 SSVVDVL 265
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 156/331 (47%), Gaps = 13/331 (3%)
Query: 194 VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWS 253
VLTV I+ I K K + A +F D C N T+ I+ L + D A+S
Sbjct: 439 VLTVNIM---IDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYS 495
Query: 254 VCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC 313
+ EKM++ G +P + +I F K G+ ++ H +Y P +++ + +
Sbjct: 496 LYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVF 555
Query: 314 QEDETVK---LALDM-LDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
+ ET K L ++ F +AR Y+I +I L + + L M +G
Sbjct: 556 KAGETEKGRALFREINAHGFIPDARSYSI-----LIHGLVKAGLANETYELFYAMKEQGC 610
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
+N+VI + K+G + A ++L+ M+ +G P V TY ++ G A +++EA
Sbjct: 611 VLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYM 670
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ EAK N +L+ V Y +LI G+ K+ D A ++ E+ G+ PNV +N L+ +L
Sbjct: 671 LFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDAL- 729
Query: 490 LKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
+KA + A + M+ N IT +++
Sbjct: 730 VKAEEINEALICFQSMKDLKCPPNQITYSIL 760
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 147/340 (43%), Gaps = 10/340 (2%)
Query: 150 VCFFKWVT-SGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFS 208
VC VT S ++D L K C V + Y+L++ + + G + + LI F
Sbjct: 469 VCTPNAVTFSSLIDGLGK--CGRV--DDAYSLYEKMLDCGHVPGAI----VYTSLIRSFF 520
Query: 209 KLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSE 268
K G+ + +++ + GC + ++ + + + ++ ++ G +PD+
Sbjct: 521 KCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDAR 580
Query: 269 KVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDD 328
+I K G A E + ++ +E+ +I C+ + K A +L++
Sbjct: 581 SYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNK-AYQLLEE 639
Query: 329 FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD 388
+ + + SVI L ++ + A L + S G V++S+I + K G
Sbjct: 640 MKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGR 699
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHT 448
+ A +++ + +GL P+VYT+ L+ ++ EA K + +TY
Sbjct: 700 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSI 759
Query: 449 LIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
LI G C++ +F+ A EM+ +G++PN Y +I L
Sbjct: 760 LINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGL 799
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 124/276 (44%), Gaps = 6/276 (2%)
Query: 233 ETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTL 292
E Y + ++R FD + E+M +G P S ++++ K K +EA +
Sbjct: 126 EAYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQT 185
Query: 293 AREKKMYPPQSVVAFLISSL--CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
R+ K P S LI +L +E + + + + + E + F+++IR R
Sbjct: 186 MRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVN---VHLFTTLIRVFAR 242
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
V A +LL +M S ++N I + KAG + + + M+S GL PD T
Sbjct: 243 EGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVT 302
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
YT ++ +++EA E+ + ++N Y+T+I GY +FD A LL K
Sbjct: 303 YTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQK 362
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
G P+V YN ++ L K A ++ E+M+
Sbjct: 363 AKGSIPSVIAYNCILTCLG-KKRRVEEALRIFEEMK 397
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 157/348 (45%), Gaps = 21/348 (6%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
++N + K G+ + +F + +G + + +Y I L + + + + + M
Sbjct: 546 LINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAM 605
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM--YPPQSVVAF--LISSLCQ 314
E G + D+ +I FCK GK +A Y L E K+ +PP +VV + +I L +
Sbjct: 606 KEQGCVLDTHAYNAVIDGFCKSGKVNKA---YQLLEEMKVKGHPP-TVVTYGSVIDGLAK 661
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
D + A + ++ K + +SS+I ++ + A ++ +++ +G P
Sbjct: 662 IDR-LDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVY 720
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
+N ++ A KA ++ A+ + M+ P+ TY+ L++G + +A E
Sbjct: 721 TWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEM 780
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL--CLKA 492
+K + + +TY T+I G K A L + K G P+ YN +I+ L KA
Sbjct: 781 QKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKA 840
Query: 493 LDWRTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIENGEALVEA 540
+D A L E+ RLKG +++ T ++ DA+ E L +A
Sbjct: 841 MD---AYALFEETRLKGCNIHTKTCVVLL-------DALHKAECLEQA 878
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 127/312 (40%), Gaps = 12/312 (3%)
Query: 180 LWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI 239
L+ ++E+G + + V + LI +F++ G+ AA + ++ A+ Y I
Sbjct: 217 LFHQMQELGYE----VNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCI 272
Query: 240 EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
+ + D +W +M G +PD +I CK + EA ++ + +
Sbjct: 273 DCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKV 332
Query: 300 PPQSVVAFLI---SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHG 356
P +I S + DE A +L+ + ++ ++ ++ L + + V
Sbjct: 333 PCAYAYNTMIMGYGSAGKFDE----AYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEE 388
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A + +M + P +N +I + G + A+E+ M GL P+V T ++
Sbjct: 389 ALRIFEEMKRDAVP-NVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMID 447
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
++EEAC I + VT+ +LI G K D A L +M D G P
Sbjct: 448 RLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVP 507
Query: 477 NVDEYNKLIQSL 488
Y LI+S
Sbjct: 508 GAIVYTSLIRSF 519
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 137/365 (37%), Gaps = 41/365 (11%)
Query: 181 WDIVKEIGEKEKGVLTVEI-LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI 239
W E+ K G++ ++ +I + K + A E+F + V Y I
Sbjct: 285 WKFFHEM--KSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMI 342
Query: 240 EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
FD A+ + E+ GS+P I++ K + +EA ++ ++
Sbjct: 343 MGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFE-EMKRDAV 401
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDD------------------------------- 328
P LI LC+E + + AL++ DD
Sbjct: 402 PNVPTYNILIDMLCREGK-LNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACS 460
Query: 329 -FSGEARKYAIK---PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
F G K FSS+I L + V A +L KM+ G PG V+ S+I ++
Sbjct: 461 IFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFF 520
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV 444
K G ++ K M G PD+ M G+ E+ + E +
Sbjct: 521 KCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDAR 580
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLED 504
+Y LI G K + +L MK+ G + YN +I C K+ A +LLE+
Sbjct: 581 SYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFC-KSGKVNKAYQLLEE 639
Query: 505 MRLKG 509
M++KG
Sbjct: 640 MKVKG 644
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 122/314 (38%), Gaps = 38/314 (12%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI S++ + +F++ + G N + I +R D A S+ ++M
Sbjct: 201 LIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNS 260
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
D I F K GK + + + + P
Sbjct: 261 LDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMP---------------------- 298
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
DD + ++S+I LC+ + A L ++ P +N++I
Sbjct: 299 ----DDVT----------YTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMG 344
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y AG A +L+ +++G P V Y +++ ++EEA I E K++
Sbjct: 345 YGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNV 404
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
P TY+ LI C+ + + AL++ ++M+ G+ PNV N +I LC KA A +
Sbjct: 405 P-TYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLC-KAQKLEEACSIF 462
Query: 503 EDMRLKGLHLNGIT 516
E M K N +T
Sbjct: 463 EGMDDKVCTPNAVT 476
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 136/288 (47%), Gaps = 1/288 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I K G AFE+ GC + +Y + AL + ++ + KM
Sbjct: 263 NTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 322
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
P+ +I+ C+ GK +EA + L +EK + P LI++ C+E +
Sbjct: 323 EKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGR-LD 381
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
+A++ L+ + I +++V+ +LC+ A + K+ G P ++ +N++
Sbjct: 382 VAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMF 441
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
SA +GD A+ M+ M S G+ PD TY ++S G +++A E+L + +
Sbjct: 442 SALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFH 501
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
S VTY+ ++ G+CK + A+ +L+ M G +PN Y LI+ +
Sbjct: 502 PSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGI 549
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 144/329 (43%), Gaps = 14/329 (4%)
Query: 184 VKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALS 243
V EI EK G V N LI F K+ + A V ++ + TY I +L
Sbjct: 142 VMEILEK-FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLC 200
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS 303
R D A V ++++ P +I G EA + + + P
Sbjct: 201 SRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMF 260
Query: 304 VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSK 363
+I +C+E V A +M+ + + + + ++ ++R+L + L++K
Sbjct: 261 TYNTIIRGMCKEG-MVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTK 319
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
M SE P ++ +I+ + G + AM +LKLM+ +GL PD Y+Y L++ + G+
Sbjct: 320 MFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGR 379
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
++ A E L + V Y+T++ CK + D AL++ ++ +VG PN YN
Sbjct: 380 LDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNT 439
Query: 484 LIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
+ +L W + +K ++ LH+
Sbjct: 440 MFSAL------WSSGDK------IRALHM 456
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 137/313 (43%), Gaps = 5/313 (1%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N LI F K A F K G + T+ + L A +M
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMF 176
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
ET P+ +++ C+ G+ EA + E + P Q ++ +C++ +TV
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236
Query: 320 KLALDMLDDFSGEARKYA-IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
AL++L + + +S++I SLC+ A+ L ++M +G P +NS
Sbjct: 237 S-ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I + +G + A ++L+ M R + PDV TY L++ + G+ EA E+ +E
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC-LKALDWRT 497
+ +TY ++I G+CK D A + M G PN+ +N LI C K +D
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID--D 413
Query: 498 AEKLLEDMRLKGL 510
+LL +M GL
Sbjct: 414 GMELLHEMTETGL 426
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 132/285 (46%), Gaps = 12/285 (4%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL-PDSEK 269
G+ A + ++ + G Q TY ++ + ++ A ++ KM E + P+
Sbjct: 198 GRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVI 257
Query: 270 VGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDML 326
II CK G+ +A ++T +EK ++P +I C + +L +ML
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317
Query: 327 DDFSGEARKYA--IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
+ RK + + ++++I + + A+ L +M+ G P ++S+I +
Sbjct: 318 E------RKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFC 371
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV 444
K + A M LM ++G P++ T+ L+ GY ++++ E+L+E +
Sbjct: 372 KQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTT 431
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
TY+TLI G+ + + + AL LL EM G+ P++ + L+ LC
Sbjct: 432 TYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 162/373 (43%), Gaps = 21/373 (5%)
Query: 156 VTSG-VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGK 214
+T G +VD + K K + + ++++++ E + V I + +I K G+
Sbjct: 220 ITYGTIVDGMCK-------KGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHS 272
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
A +F + + G + TY I + A + ++M+E PD +I
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR 334
+ F K GK EA +Y + + P + +I C+++ + A M + +
Sbjct: 333 NAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR-LDAAEHMFYLMATKGC 391
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
+ F+++I C K + LL +M G +N++I + GD+ A++
Sbjct: 392 SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALD 451
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE---ILNEAKKNHSRLSPV------- 444
+L+ M S GL PD+ T L+ G + G++++A E ++ ++KK+ P
Sbjct: 452 LLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDV 511
Query: 445 -TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
TY+ LI G +F A +L EM G+ P+ Y+ +I LC K A ++ +
Sbjct: 512 QTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC-KQSRLDEATQMFD 570
Query: 504 DMRLKGLHLNGIT 516
M K N +T
Sbjct: 571 SMGSKSFSPNVVT 583
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 131/322 (40%), Gaps = 25/322 (7%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I F K + AA +F GC N T+ I+ K D + +M ETG
Sbjct: 366 MIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+ D+ +I F G A + + P L+ LC ++ +K A
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC-DNGKLKDA 484
Query: 323 LDMLDDFSGEARKY-AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP------------ 369
L+M + A PF+ V DV L+S +I+EG
Sbjct: 485 LEMFKVMQKSKKDLDASHPFNGV------EPDVQTYNILISGLINEGKFLEAEELYEEMP 538
Query: 370 ----PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
P ++S+I K + A +M M S+ P+V T+T L++GY G+++
Sbjct: 539 HRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVD 598
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
+ E+ E + + +TY TLI G+ K+ + AL + EM GV P+ ++
Sbjct: 599 DGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 658
Query: 486 QSLCLKALDWRTAEKLLEDMRL 507
L K + + A +LE +++
Sbjct: 659 TGLWSKE-ELKRAVAMLEKLQM 679
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 2/174 (1%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
I F+ +I+ C + A + K+ G P F +++ ++ A++
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFH 173
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M +P+V T+T LM+G G++ EA +L+ ++ + + +TY T++ G CK
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233
Query: 458 EFDCALKLLNEMKDVG-VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+ AL LL +M++V + PNV Y+ +I SLC K A+ L +M+ KG+
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLC-KDGRHSDAQNLFTEMQEKGI 286
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 1/184 (0%)
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A+D+ D ++ F ++ + RM+ +L KM + FN +I
Sbjct: 63 AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIK 122
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
+ + A+ + GL PDV T+T L+ G ++ EA + ++ + R
Sbjct: 123 CFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRP 182
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+ VT+ TL+ G C+ A+ LL+ M + G+QP Y ++ +C K D +A L
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG-DTVSALNL 241
Query: 502 LEDM 505
L M
Sbjct: 242 LRKM 245
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 71/172 (41%), Gaps = 5/172 (2%)
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+K + A L S M+ P P F ++ + + + + M + ++ D+Y+
Sbjct: 57 IKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYS 116
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
+ L+ + + ++ A + K VT+ TL+ G C + AL ++M
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMF 176
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAE--KLLEDMRLKGLHLNGITRALI 520
+ +PNV + L+ LC + R E LL+ M GL IT I
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREG---RIVEAVALLDRMMEDGLQPTQITYGTI 225
>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
Length = 734
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 152/339 (44%), Gaps = 46/339 (13%)
Query: 155 W-VTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKG 213
W V V++ LLK +C GK+ A+ +++ + E TV + L+ F +
Sbjct: 129 WRVNDIVINQLLKGLCD--GKRVGEAMDVLLQRMPELGCTPDTVS-YSILLKGFCNENRA 185
Query: 214 KAAFEVFNKFG-DYG--CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
+ A E+ D+G C N TY I+ L + ++FD A V ++MI+ G P+++
Sbjct: 186 EEALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTY 245
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
+I + GK KE + ML+ S
Sbjct: 246 NCLIHGYLSIGKWKEV------------------------------------VQMLEKMS 269
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
K + S++ LC + ++H + L M+ G P + +FN SAY+K G +
Sbjct: 270 ARGLKPDCYTYGSLLNYLCALSEMH---SFLDLMVENGLSPDHHIFNIFFSAYAKCGMID 326
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
AM++ MR GL P+V Y L+ G++++A N+ + V +++L+
Sbjct: 327 KAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLV 386
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
G C +++++ A +L+ EM D G+ PN +N LI +LC
Sbjct: 387 YGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLC 425
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 153/358 (42%), Gaps = 24/358 (6%)
Query: 171 SVGK-KEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCV 229
S+GK KEV + + + G K +LN L AL + + G
Sbjct: 254 SIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCAL-------SEMHSFLDLMVENGLS 306
Query: 230 ANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVV 289
+ + A ++ + D A + KM + G P+ G +I CK G+ +A V
Sbjct: 307 PDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVK 366
Query: 290 YTLAREKKMYPPQSVVAFLISSLCQEDE---TVKLALDMLDDFSGEARKYAIKP----FS 342
+ + + P V L+ LC D+ +L +MLD I P F+
Sbjct: 367 FNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQ--------GICPNAVFFN 418
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
++I +LC + V + L+ M G P + +IS Y AG A ++ M S
Sbjct: 419 TLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSI 478
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
GL P TY L+ GY + ++++A + E + VTY+T++ G + + F A
Sbjct: 479 GLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEA 538
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
+L M + G + ++ YN ++ LC K+ A K+ + + KGL LN IT ++
Sbjct: 539 KELYLNMINSGTKCDIYTYNIILNGLC-KSNCVDEAFKMFQSLCSKGLQLNIITFTIM 595
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 158/380 (41%), Gaps = 14/380 (3%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+LL +C+ E+++ D++ E G I N + ++K G A ++FNK
Sbjct: 282 SLLNYLCA---LSEMHSFLDLMVENGLSPDH----HIFNIFFSAYAKCGMIDKAMDIFNK 334
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+G N Y I+AL + D A +MI G P+ ++ C K
Sbjct: 335 MRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDK 394
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV--KLALDMLDDFSGEARKYAIKP 340
+ A + ++ + P LI +LC + + +D+++ ++ P
Sbjct: 395 WERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTP 454
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+I C A+ + M+S G P +N+++ Y A + A + + M
Sbjct: 455 ---LISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREML 511
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+G+ P V TY ++ G + EA E+ + ++ TY+ ++ G CK D
Sbjct: 512 RKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVD 571
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
A K+ + G+Q N+ + +I +L LK A L + GL N +T L+
Sbjct: 572 EAFKMFQSLCSKGLQLNIITFTIMIGAL-LKGGRKEDAMDLFAAIPANGLVPNVVTYRLV 630
Query: 521 RAVKELEEDAIENGEALVEA 540
A +EE ++E ++L A
Sbjct: 631 -AENLIEEGSLEEFDSLFSA 649
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 122/299 (40%), Gaps = 13/299 (4%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
+ + N L+ + K + A E+ + D G N + I L +
Sbjct: 378 NIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLI 437
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+ M G PD+ +IS +C G+ EA V+ + P + L+ C
Sbjct: 438 DLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSA 497
Query: 316 ---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
D+ L +ML + + +++++ L + K AK L MI+ G
Sbjct: 498 SRIDDAYCLFREMLR----KGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCD 553
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+N +++ K+ + A +M + + S+GL+ ++ T+T ++ GG+ E+A ++
Sbjct: 554 IYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFA 613
Query: 433 EAKKNHSRLSPVTYHTLIRGYCK---LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
N + VTY + + LEEFD L + M+ G PN N L++ L
Sbjct: 614 AIPANGLVPNVVTYRLVAENLIEEGSLEEFD---SLFSAMEKNGTAPNSQMLNALVRRL 669
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 153/334 (45%), Gaps = 19/334 (5%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEI---GEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
++K +CSS ++ ++IVKE+ G + V I LI F + + A V
Sbjct: 422 TVVKGMCSS---GDLDGAYNIVKEMIASGCRP----NVVIYTTLIKTFLQNSRFGDAMRV 474
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
+ + G + Y I LS+ K D A S +M+E G P++ G IS + +
Sbjct: 475 LKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIE 534
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA---LDMLDD-FSGEARK 335
+ A RE + P + + LI+ C++ + ++ M+D G+A+
Sbjct: 535 ASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKT 594
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
Y + ++ L + V A+ + +M +G P + +I+ +SK G+M A +
Sbjct: 595 YTV-----LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
M GL P+V Y L+ G+ G++E+A E+L+E + VTY T+I GYCK
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ A +L +EMK G+ P+ Y L+ C
Sbjct: 710 SGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC 743
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 123/268 (45%), Gaps = 5/268 (1%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G + TY I+ L + + D A + +M+ G I K G ++A
Sbjct: 307 GVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKA 366
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS--SV 344
++ + P A LI C+E + V+ ++L + + R I P++ +V
Sbjct: 367 KALFDGMIASGLIPQAQAYASLIEGYCRE-KNVRQGYELLVEM--KKRNIVISPYTYGTV 423
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
++ +C D+ GA ++ +MI+ G P ++ ++I + + AM +LK M+ +G+
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGI 483
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
PD++ Y L+ G + +M+EA L E +N + + TY I GY + EF A K
Sbjct: 484 APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADK 543
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
+ EM++ GV PN LI C K
Sbjct: 544 YVKEMRECGVLPNKVLCTGLINEYCKKG 571
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 135/309 (43%), Gaps = 13/309 (4%)
Query: 183 IVKEIGEKEKGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEA 241
++KE+ KE+G+ + N LI SK + A + + G N TY I
Sbjct: 474 VLKEM--KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISG 531
Query: 242 LSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPP 301
F A ++M E G LP+ +I+ +CK GK EA Y ++ +
Sbjct: 532 YIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGD 591
Query: 302 QSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGA 357
L++ L + D+ +D ++ E R I P + +I ++ ++ A
Sbjct: 592 AKTYTVLMNGLFKNDK-----VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKA 646
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
++ +M+ EG P ++N ++ + ++G++ A E+L M +GL P+ TY ++ G
Sbjct: 647 SSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDG 706
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
Y G + EA + +E K Y TL+ G C+L + + A+ + K G +
Sbjct: 707 YCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASS 765
Query: 478 VDEYNKLIQ 486
+N LI
Sbjct: 766 TAPFNALIN 774
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 149/346 (43%), Gaps = 22/346 (6%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI FSKLG + A +F++ + G N Y + R + A + ++M G
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P++ II +CK G EA ++ + K + P V L+ C+ ++ +
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAI 752
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG----PPPGNAVFNS 378
+ G A A PF+++I + + +L++++ P + +N
Sbjct: 753 TIFGTNKKGCASSTA--PFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I K G++ A E+ M++ L P V TYT L++GY G+ E + +EA
Sbjct: 811 MIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAG 870
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL----- 493
+ Y +I + K AL L+++M + VD+ KL S C L
Sbjct: 871 IEPDHIMYSVIINAFLKEGMTTKALVLVDQM---FAKNAVDDGCKLSISTCRALLSGFAK 927
Query: 494 --DWRTAEKLLEDM-RLKGLH-----LNGITRALIRAVKELEEDAI 531
+ AEK++E+M RL+ + + I + I + + +E DA+
Sbjct: 928 VGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQRVEADAV 973
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 126/310 (40%), Gaps = 57/310 (18%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH-VVYTLAREKK 297
++AL R D W V + M+E + D + +I C+ G + V++ +E +
Sbjct: 193 LDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFR 252
Query: 298 MYPPQSVVAFLI--SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVH 355
A + S +C+ +K D+L D LC++K +
Sbjct: 253 TATLNVDGALKLKESMICKGLVPLKYTYDVLID------------------GLCKIKRLE 294
Query: 356 GAKTLL-----------------------------------SKMISEGPPPGNAVFNSVI 380
AK+LL +M+S G +++ I
Sbjct: 295 DAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCI 354
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
SK G M A + M + GL P Y L+ GY + + E+L E KK +
Sbjct: 355 CVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIV 414
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+SP TY T+++G C + D A ++ EM G +PNV Y LI++ L+ + A +
Sbjct: 415 ISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTF-LQNSRFGDAMR 473
Query: 501 LLEDMRLKGL 510
+L++M+ +G+
Sbjct: 474 VLKEMKEQGI 483
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 101/257 (39%), Gaps = 44/257 (17%)
Query: 248 FDWAWSVCEKMIE-------------------TGSLPDSEKVGKIISWFCKGGKAKEAHV 288
F+ A SV E+MIE G D G + + +EA
Sbjct: 113 FEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKEYIEEAVF 172
Query: 289 VYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML-DDFSGEARK---YAIKPFSSV 344
V++ + ++ P S L+ +L + + LD+ D + G + + +K + +
Sbjct: 173 VFSSSMGLELVPRLSRCKVLLDALLRWNR-----LDLFWDVYKGMVERNVVFDVKTYHML 227
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
I + CR +V K +L K E A N + A+++ + M +GL
Sbjct: 228 IIAHCRAGNVQLGKDVLFKTEKEFR---TATLN-----------VDGALKLKESMICKGL 273
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
P YTY L+ G ++E+A +L E L TY LI G K D A
Sbjct: 274 VPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKG 333
Query: 465 LLNEMKDVGVQPNVDEY 481
L++EM G+ N+ Y
Sbjct: 334 LVHEMVSHGI--NIKPY 348
>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g09680
gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 607
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 143/296 (48%), Gaps = 15/296 (5%)
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A V +++ + P +I+ +CK G E + + + P + LI+
Sbjct: 259 AQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALIN 318
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMIS 366
+LC+E++ +D E K + P F+++I R ++ K KM+S
Sbjct: 319 ALCKENK-----MDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLS 373
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
+G P ++N++++ + K GD+ A ++ M RGL+PD TYT L+ G+ GG +E
Sbjct: 374 KGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVET 433
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A EI E +N L V + L+ G CK A + L EM G++P+ Y ++
Sbjct: 434 ALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMD 493
Query: 487 SLCLKALDWRTAEKLLEDMRLKGLHLNGIT--RALIRAVKELEEDAIENGEALVEA 540
+ C K D +T KLL++M+ G H+ + L+ + +L + ++N + L++A
Sbjct: 494 AFCKKG-DAQTGFKLLKEMQSDG-HVPSVVTYNVLLNGLCKLGQ--MKNADMLLDA 545
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 132/295 (44%), Gaps = 9/295 (3%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
TV N LI + K+G F + ++ + TY I AL + D A +
Sbjct: 274 TVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLF 333
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
++M + G +P+ +I + G+ Y K + P + L++ C+
Sbjct: 334 DEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKN 393
Query: 316 DETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
+ V A +++D G R+ ++P ++++I CR DV A + +M G
Sbjct: 394 GDLVA-ARNIVD---GMIRR-GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIEL 448
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
F++++ K G + A L+ M G+KPD TYT +M + G + ++L
Sbjct: 449 DRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLL 508
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
E + + S VTY+ L+ G CKL + A LL+ M ++GV P+ YN L++
Sbjct: 509 KEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLE 563
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 133/314 (42%), Gaps = 4/314 (1%)
Query: 184 VKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALS 243
+K EK + V + LI K K A +F++ G + N + I S
Sbjct: 297 LKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHS 356
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS 303
R D +KM+ G PD +++ FCK G A + + + P +
Sbjct: 357 RNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKI 416
Query: 304 VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSK 363
LI C+ + V+ AL++ + + FS+++ +C+ V A+ L +
Sbjct: 417 TYTTLIDGFCRGGD-VETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALRE 475
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
M+ G P + + ++ A+ K GD ++LK M+S G P V TY L++G GQ
Sbjct: 476 MLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQ 535
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
M+ A +L+ +TY+TL+ G+ + + K + ++G+ ++ Y
Sbjct: 536 MKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHAN---SSKRYIQKPEIGIVADLASYKS 592
Query: 484 LIQSLCLKALDWRT 497
++ L + D R
Sbjct: 593 IVNELDRASKDHRN 606
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 84/176 (47%), Gaps = 1/176 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F+ ++ C+ ++ A+ + ++ P FN++I+ Y K G++ + M
Sbjct: 243 FNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQME 302
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+PDV+TY+ L++ +M+ A + +E K + V + TLI G+ + E D
Sbjct: 303 KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEID 362
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ +M G+QP++ YN L+ C K D A +++ M +GL + IT
Sbjct: 363 LMKESYQKMLSKGLQPDIVLYNTLVNGFC-KNGDLVAARNIVDGMIRRGLRPDKIT 417
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 104/260 (40%), Gaps = 13/260 (5%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+ A+C + L+D + + G V I LI S+ G+ E + K
Sbjct: 315 ALINALCKENKMDGAHGLFDEMCKRGLIPNDV----IFTTLIHGHSRNGEIDLMKESYQK 370
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + Y + + A ++ + MI G PD +I FC+GG
Sbjct: 371 MLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGD 430
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP-- 340
+ A + + + + + L+ +C+E + + E + IKP
Sbjct: 431 VETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERAL-----REMLRAGIKPDD 485
Query: 341 --FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
++ ++ + C+ D LL +M S+G P +N +++ K G M A +L
Sbjct: 486 VTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDA 545
Query: 399 MRSRGLKPDVYTYTGLMSGY 418
M + G+ PD TY L+ G+
Sbjct: 546 MLNIGVVPDDITYNTLLEGH 565
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G +VY + LM+ + G + +A ++ +E K + + V+++TLI GYCK+ D
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
+L ++M+ +P+V Y+ LI +LC K A L ++M +GL N +
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALC-KENKMDGAHGLFDEMCKRGLIPNDV 346
>gi|302791145|ref|XP_002977339.1| hypothetical protein SELMODRAFT_32460 [Selaginella moellendorffii]
gi|300154709|gb|EFJ21343.1| hypothetical protein SELMODRAFT_32460 [Selaginella moellendorffii]
Length = 336
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 127/293 (43%), Gaps = 7/293 (2%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+ S G A VF++ D + N TY I L D + E+M
Sbjct: 37 NTLLTSHSLQGNLTGAIRVFHEMPDKN-LPNMVTYNSLIHGLCMTNGVDSTLLLMEEMTA 95
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
TG LPD +I CK G+ EA+ ++ + K P + LI C+ D +
Sbjct: 96 TGCLPDINTYNTLIDGLCKTGRVPEANRLFGEMKAKFCNPDVITYSCLIGGFCKLDR-IN 154
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
+A + DD +A + F +++ C V A+ LL +M++ P + S++
Sbjct: 155 MACTLFDDMLKQAALPDVVTFPTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLV 214
Query: 381 SAYSKAGDMTPAMEMLKLMRSRG----LKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
+ K M A +LK M G K D++ Y +M G G+M A E+L K+
Sbjct: 215 DDFCKVKRMVEAHRVLKRMAKGGSNKNCKADMFAYRMMMDGLCRTGRMSAALELLEAIKQ 274
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK-DVGVQPNVDEYNKLIQSL 488
+ + Y LIRG C+ +E A+++L EM +PN Y +IQ L
Sbjct: 275 SGTPPRHDIYVALIRGLCQGKELRKAMEVLEEMTLSRKGRPNAKAYKAVIQEL 327
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++S+I LC V L+ +M + G P +N++I K G + A + M+
Sbjct: 70 YNSLIHGLCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPEANRLFGEMK 129
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
++ PDV TY+ L+ G+ ++ AC + ++ K + VT+ TL+ GYC D
Sbjct: 130 AKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEGYCNAGLVD 189
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A +LL EM P+V Y L+ C
Sbjct: 190 DAERLLEEMVASDCSPDVYTYTSLVDDFC 218
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P +NS+I + + +++ M + G PD+ TY L+ G G++ EA +
Sbjct: 65 PNMVTYNSLIHGLCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPEANRL 124
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
E K +TY LI G+CKL+ + A L ++M P+V + L++ C
Sbjct: 125 FGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEGYCN 184
Query: 491 KALDWRTAEKLLEDM 505
L AE+LLE+M
Sbjct: 185 AGL-VDDAERLLEEM 198
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 100/250 (40%), Gaps = 41/250 (16%)
Query: 297 KMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHG 356
K P LI LC + V L ++++ + I ++++I LC+ V
Sbjct: 62 KNLPNMVTYNSLIHGLCMTN-GVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPE 120
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A L +M ++ P ++ +I + K + A + M + PDV T+ L+
Sbjct: 121 ANRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVE 180
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF----------------- 459
GY N G +++A +L E + TY +L+ +CK++
Sbjct: 181 GYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDDFCKVKRMVEAHRVLKRMAKGGSNK 240
Query: 460 DC----------------------ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
+C AL+LL +K G P D Y LI+ LC + + R
Sbjct: 241 NCKADMFAYRMMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLC-QGKELRK 299
Query: 498 AEKLLEDMRL 507
A ++LE+M L
Sbjct: 300 AMEVLEEMTL 309
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/270 (20%), Positives = 107/270 (39%), Gaps = 8/270 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
++L+ +C + G L + + G + + N LI K G+ A +F
Sbjct: 71 NSLIHGLCMTNGVDSTLLLMEEMTATG----CLPDINTYNTLIDGLCKTGRVPEANRLFG 126
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ C + TY I + + A ++ + M++ +LPD ++ +C G
Sbjct: 127 EMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEGYCNAG 186
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV---KLALDMLDDFSGEARKYAI 338
+A + P L+ C+ V ++ M S + K +
Sbjct: 187 LVDDAERLLEEMVASDCSPDVYTYTSLVDDFCKVKRMVEAHRVLKRMAKGGSNKNCKADM 246
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
+ ++ LCR + A LL + G PP + ++ ++I + ++ AME+L+
Sbjct: 247 FAYRMMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELRKAMEVLEE 306
Query: 399 MR-SRGLKPDVYTYTGLMSGYANGGQMEEA 427
M SR +P+ Y ++ A G+ E+A
Sbjct: 307 MTLSRKGRPNAKAYKAVIQELAREGRHEKA 336
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 139/312 (44%), Gaps = 9/312 (2%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F K A F K G + T+ + L A ++ +M ET
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P+ +++ C+ G+ EA + E + P Q ++ +C+ +TV A
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVS-A 238
Query: 323 LDML---DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
LD+L ++ S I +S++I SLC+ A+ L ++M +G P +NS+
Sbjct: 239 LDLLRKMEEISHIIPNVVI--YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I + +G + A ++L+ M R + PDV TY L++ + G+ EA E+ +E
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC-LKALDWRTA 498
+ +TY ++I G+CK D A + M G PN+ +N LI C K +D
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID--DG 414
Query: 499 EKLLEDMRLKGL 510
+LL +M GL
Sbjct: 415 MELLHEMTETGL 426
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 147/334 (44%), Gaps = 16/334 (4%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ LL +C E L+ + E + V ++N L + G+ A + +
Sbjct: 153 NTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGL----CREGRIVEAVALLD 208
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL-PDSEKVGKIISWFCKG 280
+ + G Q TY ++ + + A + KM E + P+ II CK
Sbjct: 209 RMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKD 268
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYA 337
G+ +A ++T +EK ++P +I C + +L +ML+ RK +
Sbjct: 269 GRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLE------RKIS 322
Query: 338 --IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+ ++++I + + A+ L +M+ G P ++S+I + K + A M
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
LM ++G P++ T+ L+ GY ++++ E+L+E + TY+TLI G+
Sbjct: 383 FYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + + AL LL EM G+ P++ + L+ LC
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 131/322 (40%), Gaps = 25/322 (7%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I F K + AA +F GC N T+ I+ K D + +M ETG
Sbjct: 366 MIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+ D+ +I F G A + + P L+ LC ++ +K A
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC-DNGKLKDA 484
Query: 323 LDMLDDFSGEARKY-AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP------------ 369
L+M + A PF+ V DV L+S +I+EG
Sbjct: 485 LEMFKVMQKSKKDLDASHPFNGV------EPDVQTYNILISGLINEGKFLEAEELYEEMP 538
Query: 370 ----PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
P ++S+I K + A +M M S+ P+V T+T L++GY G+++
Sbjct: 539 HRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVD 598
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
+ E+ E + + +TY TLI G+ K+ + AL + EM GV P+ ++
Sbjct: 599 DGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 658
Query: 486 QSLCLKALDWRTAEKLLEDMRL 507
L K + + A +LE +++
Sbjct: 659 TGLWSKE-ELKRAVAMLEKLQM 679
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 89/174 (51%), Gaps = 2/174 (1%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
I F+ +I+ C + A + K+ G P FN+++ ++ A+ +
Sbjct: 114 IYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFH 173
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M +P+V T+T LM+G G++ EA +L+ ++ + + +TY T++ G CK+
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIG 233
Query: 458 EFDCALKLLNEMKDVG-VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+ AL LL +M+++ + PNV Y+ +I SLC K A+ L +M+ KG+
Sbjct: 234 DTVSALDLLRKMEEISHIIPNVVIYSAIIDSLC-KDGRHSDAQNLFTEMQEKGI 286
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 5/172 (2%)
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+K + A L S M+ P P F ++ + + + + M + ++ D+Y+
Sbjct: 57 IKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYS 116
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
+T L+ + + ++ A + K VT++TL+ G C + AL L ++M
Sbjct: 117 FTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMF 176
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAE--KLLEDMRLKGLHLNGITRALI 520
+ +PNV + L+ LC + R E LL+ M GL IT I
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREG---RIVEAVALLDRMMEDGLQPTQITYGTI 225
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 127/261 (48%), Gaps = 6/261 (2%)
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--L 308
W ++++ G P+ ++ FCK G A +V+ + + P SVV+F L
Sbjct: 210 CWEFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRP--SVVSFNTL 267
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
IS C+ + V+ + E + +S++I LC+ V A L +M G
Sbjct: 268 ISGYCRS-KNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMG 326
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P F ++I K G + A+ ++M+ RG++PD+ TY L++G G ++EA
Sbjct: 327 LVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEAR 386
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
++LNE N + +T+ TL+ G CK + D AL++ + M + G++ + + LI L
Sbjct: 387 KLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGL 446
Query: 489 CLKALDWRTAEKLLEDMRLKG 509
C R AE++L+DM G
Sbjct: 447 CRDG-RVRDAERMLKDMLSAG 466
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 130/294 (44%), Gaps = 5/294 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ C S +E + L K + E E+ V + LI K + + A +F+
Sbjct: 265 NTLISGYCRSKNVEEGFVL----KSVMESERISPDVFTYSALINGLCKESRVEEANGLFD 320
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ + G V N T+ I+ + D A E M + G PD +I+ C+ G
Sbjct: 321 EMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDG 380
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
KEA + P + L+ C+ D + AL++ D E + F
Sbjct: 381 DLKEARKLLNEMIGNGFKPDKITFTTLMDGCCK-DGDMDSALEIKDRMVEEGIELDDVAF 439
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+++I LCR V A+ +L M+S G P + + VI + K GD+ ++LK M+
Sbjct: 440 TALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQR 499
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
G P V TY LM+G+ GQM+ A +L+ + +T++ L+ G+CK
Sbjct: 500 DGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCK 553
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 135/310 (43%), Gaps = 2/310 (0%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
V + N L+ F K+G A VF++ G + ++ I R K + + +
Sbjct: 225 NVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLK 284
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
M PD +I+ CK + +EA+ ++ E + P LI C+
Sbjct: 285 SVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKH 344
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ + LAL + + + ++++I LCR D+ A+ LL++MI G P
Sbjct: 345 GK-IDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKIT 403
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
F +++ K GDM A+E+ M G++ D +T L+SG G++ +A +L +
Sbjct: 404 FTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDML 463
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+ TY +I +CK + KLL EM+ G P V YN L+ C K
Sbjct: 464 SAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFC-KQGQM 522
Query: 496 RTAEKLLEDM 505
+ A+ LL M
Sbjct: 523 KNAKMLLHAM 532
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 123/256 (48%), Gaps = 1/256 (0%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
TY I L + + A + ++M E G +P+ +I CK GK A + +
Sbjct: 298 TYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIM 357
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
+++ + P LI+ LC+ D +K A +L++ G K F++++ C+ D
Sbjct: 358 KDRGIRPDLITYNALINGLCR-DGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGD 416
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
+ A + +M+ EG + F ++IS + G + A MLK M S G KPD TYT
Sbjct: 417 MDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTM 476
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
++ + G ++ ++L E +++ VTY+ L+ G+CK + A LL+ M ++
Sbjct: 477 VIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNME 536
Query: 474 VQPNVDEYNKLIQSLC 489
V PN +N L+ C
Sbjct: 537 VVPNDITFNILLDGHC 552
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 104/260 (40%), Gaps = 5/260 (1%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+ +C +E L+D + E+G GV LI K GK A F
Sbjct: 301 ALINGLCKESRVEEANGLFDEMCEMGLVPNGV----TFTTLIDGQCKHGKIDLALRNFEI 356
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
D G + TY I L R A + +MI G PD ++ CK G
Sbjct: 357 MKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGD 416
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
A + E+ + LIS LC+ D V+ A ML D K ++
Sbjct: 417 MDSALEIKDRMVEEGIELDDVAFTALISGLCR-DGRVRDAERMLKDMLSAGHKPDDPTYT 475
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
VI C+ DV LL +M +G PG +N++++ + K G M A +L M +
Sbjct: 476 MVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNM 535
Query: 403 GLKPDVYTYTGLMSGYANGG 422
+ P+ T+ L+ G+ G
Sbjct: 536 EVVPNDITFNILLDGHCKHG 555
>gi|222616383|gb|EEE52515.1| hypothetical protein OsJ_34721 [Oryza sativa Japonica Group]
Length = 820
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 161/384 (41%), Gaps = 18/384 (4%)
Query: 142 PLVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILN 201
PLV C S +VD L+KA + + L+ + +G V +V N
Sbjct: 138 PLVDHHRRTCATPCSLSFMVDCLIKACITCYDVQATICLFSGICRLGV----VPSVWTWN 193
Query: 202 ELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET 261
L+ ++ G+ + +N+ + + T+ +L + K D A V +M E
Sbjct: 194 LLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEM 253
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYT-LAREKKMYPPQSVVAF--LISSLCQE--- 315
G PD+ + C GK A+V+ + REK P +A+ ++ LC+E
Sbjct: 254 GVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREK---VPVEAMAYNMVMDGLCKEMRL 310
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
DE KL L++ + + + +S +IRS C+M ++ A M+S G +
Sbjct: 311 DEAEKL----LENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHI 366
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+ ++ + K G + A+ + GL D Y M Y G M EA ++LNE K
Sbjct: 367 VSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMK 426
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+ Y LI GYC E A ++ EM ++P++ YN L C L
Sbjct: 427 YGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVM 486
Query: 496 RTAEKLLEDMRLKGLHLNGITRAL 519
+ LL+ M +GL N +T +
Sbjct: 487 EVFD-LLDRMADQGLEPNSLTYGI 509
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 187/430 (43%), Gaps = 43/430 (10%)
Query: 111 LQSSVDGYLESSLDSFELDLH-EDFVLKVLETPLVLGENLVCFFKWVTSGV-VDALLKAI 168
L ++VD Y E + H ++L+ + E + F K+ SG+ +D ++ I
Sbjct: 345 LINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNI 404
Query: 169 CSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNE--LIALFSKLGKGKAAFEVFNKFGDY 226
K + + VK + E + G LT + ++ LI+ + G+ + A +VF +
Sbjct: 405 AMDTYCKNG-NMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKA 463
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
+ TY + + + + ++M + G P+S G I FC+GG EA
Sbjct: 464 NIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEA 523
Query: 287 HVVYTLAREKK------MYPPQSVVAFLISSLCQEDETVKLAL----DMLDDFSGEARKY 336
V++ + EK MY V +L+S + + + +++D FS
Sbjct: 524 EVLFNVVEEKGIDHIEVMYSSM-VCGYLLSGWTDHAYMLFVRVARQGNLVDHFSC----- 577
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
S +I LCR+ +V GA + M+ P ++ +IS Y + GDM A
Sbjct: 578 -----SKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWF 632
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK- 455
M RGL DV YT LM+GY G+++EAC++ + + + Y L+ G+ K
Sbjct: 633 HDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKE 692
Query: 456 ---------LEEFDCAL------KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+E L KLL+ MKD+ ++P+V Y LI C KA A +
Sbjct: 693 TLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKC-KAEYLVEARE 751
Query: 501 LLEDMRLKGL 510
L ++M KGL
Sbjct: 752 LFDEMLQKGL 761
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 132/326 (40%), Gaps = 34/326 (10%)
Query: 167 AICSSVGKKEVYALWDIVKEIGEKEKGVLTVEIL-NELIALFSKLGKGKAAFEVFNKFGD 225
C E L+++V+E KG+ +E++ + ++ + G A+ +F +
Sbjct: 513 GFCRGGNLSEAEVLFNVVEE-----KGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVAR 567
Query: 226 YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKE 285
G + + + I L R A +VC+ M+E +PD K+IS +C+ G +
Sbjct: 568 QGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDK 627
Query: 286 AHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFS 342
AH+ + ++ + V L++ C+ E +L + M + IKP
Sbjct: 628 AHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTN--------LGIKP-- 677
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPG-NAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
DV LL + E G + S +A ++L M+
Sbjct: 678 ----------DVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHN----KLLSSMKD 723
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
++PDV YT L+ G + EA E+ +E + Y LI GYC E
Sbjct: 724 MQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISK 783
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQS 487
A LL EM D G++P+ ++ L QS
Sbjct: 784 AEDLLQEMIDKGIEPDELTFSVLNQS 809
>gi|357144033|ref|XP_003573143.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g38730-like [Brachypodium distachyon]
Length = 599
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 157/357 (43%), Gaps = 46/357 (12%)
Query: 205 ALFSKLGKGK---AAFEVFNKFGDYGCVANQETY-------------------------- 235
AL + L + + A +VFN+ G G N Y
Sbjct: 151 ALLTALARARMTATAHKVFNEMGRAGVAMNTHVYNAMLHVCLKARDALRAEGLMTRMDAA 210
Query: 236 --------YFTIEALSRRKIFDW-AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
+ T+ AL RK + A V E+M + G PD +I CK G+ KEA
Sbjct: 211 GVPLDRFSFNTVIALYVRKGMQYEAMCVRERMQDEGVEPDIVTWNTVIHGLCKEGRMKEA 270
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
+ T + P L+ C+ + V A+ + ++ + ++++IR
Sbjct: 271 AQLRTDMIAAAVEPDTVTYTTLVDGYCRIGD-VGEAVKLREEMEAGGMVPGVATYNAIIR 329
Query: 347 SLC---RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
LC +MK+V+G LLS+M + N++I++Y+K GDMT A ++ K M G
Sbjct: 330 KLCEDGKMKEVNG---LLSEMDGRKVQADHVTCNTLINSYAKRGDMTSACKVKKRMMESG 386
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
L+ D +TY L+ G+ +++EA E L E + + L+ G+CK D L
Sbjct: 387 LQLDQFTYKALIHGFCKAKELDEAKEALFEMMGRGFSPNYSVFSWLVDGFCKKNNTDAVL 446
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
+ +E+ G+ P+ Y LI+ LC K L A+K+L M+ KGL ++ + A +
Sbjct: 447 LIPDELIKRGLPPDKSVYRSLIRRLCKKGL-VDLAQKVLHQMQGKGLEVDCLVYATL 502
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 105/272 (38%), Gaps = 38/272 (13%)
Query: 184 VKEIGEKEKG--VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEA 241
VK E E G V V N +I + GK K + ++ A+ T I +
Sbjct: 306 VKLREEMEAGGMVPGVATYNAIIRKLCEDGKMKEVNGLLSEMDGRKVQADHVTCNTLINS 365
Query: 242 LSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPP 301
++R A V ++M+E+G D +I FCK + EA + P
Sbjct: 366 YAKRGDMTSACKVKKRMMESGLQLDQFTYKALIHGFCKAKELDEAKEALFEMMGRGFSPN 425
Query: 302 QSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLL 361
SV ++L+ C+++ T + L +
Sbjct: 426 YSVFSWLVDGFCKKNNTDAVLL------------------------------------IP 449
Query: 362 SKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG 421
++I G PP +V+ S+I K G + A ++L M+ +GL+ D Y L +
Sbjct: 450 DELIKRGLPPDKSVYRSLIRRLCKKGLVDLAQKVLHQMQGKGLEVDCLVYATLAYAHLTA 509
Query: 422 GQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
G++ A +ILNE + ++P Y+ L Y
Sbjct: 510 GKVAAASDILNEMARKQMSVTPQIYNCLCTSY 541
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 122/325 (37%), Gaps = 40/325 (12%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N +IAL+ + G A V + D G + T+ I L + A + MI
Sbjct: 219 FNTVIALYVRKGMQYEAMCVRERMQDEGVEPDIVTWNTVIHGLCKEGRMKEAAQLRTDMI 278
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
PD+ ++ +C+ G EA + M P + +I LC ED +
Sbjct: 279 AAAVEPDTVTYTTLVDGYCRIGDVGEAVKLREEMEAGGMVPGVATYNAIIRKLC-EDGKM 337
Query: 320 KLALDMLDDFSGEA------------RKYAIK-----------------------PFSSV 344
K +L + G YA + + ++
Sbjct: 338 KEVNGLLSEMDGRKVQADHVTCNTLINSYAKRGDMTSACKVKKRMMESGLQLDQFTYKAL 397
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
I C+ K++ AK L +M+ G P +VF+ ++ + K + + + + RGL
Sbjct: 398 IHGFCKAKELDEAKEALFEMMGRGFSPNYSVFSWLVDGFCKKNNTDAVLLIPDELIKRGL 457
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
PD Y L+ G ++ A ++L++ + + + Y TL + + A
Sbjct: 458 PPDKSVYRSLIRRLCKKGLVDLAQKVLHQMQGKGLEVDCLVYATLAYAHLTAGKVAAASD 517
Query: 465 LLNEM--KDVGVQPNVDEYNKLIQS 487
+LNEM K + V P + YN L S
Sbjct: 518 ILNEMARKQMSVTPQI--YNCLCTS 540
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 4/186 (2%)
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
++++ +L R + A + ++M G V+N+++ KA D A ++ M +
Sbjct: 150 TALLTALARARMTATAHKVFNEMGRAGVAMNTHVYNAMLHVCLKARDALRAEGLMTRMDA 209
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+ D +++ +++ Y G EA + + VT++T+I G CK
Sbjct: 210 AGVPLDRFSFNTVIALYVRKGMQYEAMCVRERMQDEGVEPDIVTWNTVIHGLCKEGRMKE 269
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT--RAL 519
A +L +M V+P+ Y L+ C + D A KL E+M G+ + G+ A+
Sbjct: 270 AAQLRTDMIAAAVEPDTVTYTTLVDGYC-RIGDVGEAVKLREEMEAGGM-VPGVATYNAI 327
Query: 520 IRAVKE 525
IR + E
Sbjct: 328 IRKLCE 333
>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 642
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 163/378 (43%), Gaps = 40/378 (10%)
Query: 190 KEKGVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
KE G+ T +I L+ ++ KL K + A +V + D GC TY I+ L +
Sbjct: 261 KENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKEMKDKGCTLTVFTYTEWIKGLGKAGRV 320
Query: 249 DWAWSVCEKMIETGSLPDS----------EKVG----------KIISWFCK--------- 279
D A+ V MI+ G PD KVG K+ SW CK
Sbjct: 321 DDAYRVFLDMIKDGCKPDVVLINSLINILGKVGRLEVTLKLFRKMESWQCKPNVVTYNTV 380
Query: 280 -------GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
A EA + + + P + LI C+ + K AL +L++ +
Sbjct: 381 IKALFECKAPASEAASWFEKMKGCGIAPSSFTYSILIDGFCKTNRIEK-ALLLLEEMDEK 439
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
+ S+I SL ++K A L ++ V+ +I + K G ++ A
Sbjct: 440 GFPPCPAAYCSLINSLGKVKRYEAANELFLELKENCGHSSARVYAVMIKHFGKCGRLSEA 499
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
+++ M G KPDVY Y LMSG G ++EA +L +N +++ ++ G
Sbjct: 500 VDLFNEMEKLGSKPDVYAYNALMSGMVRAGMIDEAQSLLRTMDENGCSPDLNSHNIILNG 559
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
+ D A+++ +MK ++P+ YN ++ L L + A KL+ +M LKG
Sbjct: 560 LARTGVPDRAIEMFAKMKSSIIKPDAVSYNTVLGCLSHAGL-FEEAAKLMREMNLKGFEY 618
Query: 513 NGIT-RALIRAVKELEED 529
N IT +++ AV +++ED
Sbjct: 619 NNITYTSILEAVGKVDED 636
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 117/260 (45%), Gaps = 3/260 (1%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGS-LPDSEKVGKIISWFCKGGKAKEAHVV 289
+ ++ I +L + W + M+ + + + S + +I+ K +A V
Sbjct: 126 DSSSFMALIHSLDEAGFYGEMWKTIQDMVRSSTCVISSVYLSEIVKLLGKAKMVNKALSV 185
Query: 290 YTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA-IKPFSSVIRSL 348
+ + +K P + +I L QE K+ ++ ++ + + +S++I +
Sbjct: 186 FYQIKGRKCKPAATTYNSMILMLKQEGHLEKVH-EIYNEMCNDGNCFPDTVTYSALISAF 244
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
++ A L +M G P ++ +++ Y K + A++++K M+ +G V
Sbjct: 245 GKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKEMKDKGCTLTV 304
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNE 468
+TYT + G G++++A + + K+ + V ++LI K+ + LKL +
Sbjct: 305 FTYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINILGKVGRLEVTLKLFRK 364
Query: 469 MKDVGVQPNVDEYNKLIQSL 488
M+ +PNV YN +I++L
Sbjct: 365 MESWQCKPNVVTYNTVIKAL 384
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 153/334 (45%), Gaps = 19/334 (5%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEI---GEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
++K +CSS ++ ++IVKE+ G + V I LI F + + A V
Sbjct: 422 TVVKGMCSS---GDLDGAYNIVKEMIASGCRP----NVVIYTTLIKTFLQNSRFGDAMRV 474
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
+ + G + Y I LS+ K D A S +M+E G P++ G IS + +
Sbjct: 475 LKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIE 534
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA---LDMLDD-FSGEARK 335
+ A RE + P + + LI+ C++ + ++ M+D G+A+
Sbjct: 535 ASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKT 594
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
Y + ++ L + V A+ + +M +G P + +I+ +SK G+M A +
Sbjct: 595 YTV-----LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
M GL P+V Y L+ G+ G++E+A E+L+E + VTY T+I GYCK
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ A +L +EMK G+ P+ Y L+ C
Sbjct: 710 SGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC 743
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 123/268 (45%), Gaps = 5/268 (1%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G + TY I+ L + + D A + +M+ G I K G ++A
Sbjct: 307 GVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKA 366
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS--SV 344
++ + P A LI C+E + V+ ++L + + R I P++ +V
Sbjct: 367 KALFDGMIASGLIPQAQAYASLIEGYCRE-KNVRQGYELLVEM--KKRNIVISPYTYGTV 423
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
++ +C D+ GA ++ +MI+ G P ++ ++I + + AM +LK M+ +G+
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGI 483
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
PD++ Y L+ G + +M+EA L E +N + + TY I GY + EF A K
Sbjct: 484 APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADK 543
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
+ EM++ GV PN LI C K
Sbjct: 544 YVKEMRECGVLPNKVLCTGLINEYCKKG 571
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 135/309 (43%), Gaps = 13/309 (4%)
Query: 183 IVKEIGEKEKGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEA 241
++KE+ KE+G+ + N LI SK + A + + G N TY I
Sbjct: 474 VLKEM--KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISG 531
Query: 242 LSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPP 301
F A ++M E G LP+ +I+ +CK GK EA Y ++ +
Sbjct: 532 YIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGD 591
Query: 302 QSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGA 357
L++ L + D+ +D ++ E R I P + +I ++ ++ A
Sbjct: 592 AKTYTVLMNGLFKNDK-----VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKA 646
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
++ +M+ EG P ++N ++ + ++G++ A E+L M +GL P+ TY ++ G
Sbjct: 647 SSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDG 706
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
Y G + EA + +E K Y TL+ G C+L + + A+ + K G +
Sbjct: 707 YCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASS 765
Query: 478 VDEYNKLIQ 486
+N LI
Sbjct: 766 TAPFNALIN 774
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 149/346 (43%), Gaps = 22/346 (6%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI FSKLG + A +F++ + G N Y + R + A + ++M G
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P++ II +CK G EA ++ + K + P V L+ C+ ++ +
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAI 752
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG----PPPGNAVFNS 378
+ G A A PF+++I + + +L++++ P + +N
Sbjct: 753 TIFGTNKKGCASSTA--PFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I K G++ A E+ M++ L P V TYT L++GY G+ E + +EA
Sbjct: 811 MIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAG 870
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL----- 493
+ Y +I + K AL L+++M + VD+ KL S C L
Sbjct: 871 IEPDHIMYSVIINAFLKEGMTTKALVLVDQMF---AKNAVDDGCKLSISTCRALLSGFAK 927
Query: 494 --DWRTAEKLLEDM-RLKGLH-----LNGITRALIRAVKELEEDAI 531
+ AEK++E+M RL+ + + I + I + + +E DA+
Sbjct: 928 VGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQRVEADAV 973
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 126/310 (40%), Gaps = 57/310 (18%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH-VVYTLAREKK 297
++AL R D W V + M+E + D + +I C+ G + V++ +E +
Sbjct: 193 LDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFR 252
Query: 298 MYPPQSVVAFLI--SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVH 355
A + S +C+ +K D+L D LC++K +
Sbjct: 253 TATLNVDGALKLKESMICKGLVPLKYTYDVLID------------------GLCKIKRLE 294
Query: 356 GAKTLL-----------------------------------SKMISEGPPPGNAVFNSVI 380
AK+LL +M+S G +++ I
Sbjct: 295 DAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCI 354
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
SK G M A + M + GL P Y L+ GY + + E+L E KK +
Sbjct: 355 CVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIV 414
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+SP TY T+++G C + D A ++ EM G +PNV Y LI++ L+ + A +
Sbjct: 415 ISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTF-LQNSRFGDAMR 473
Query: 501 LLEDMRLKGL 510
+L++M+ +G+
Sbjct: 474 VLKEMKEQGI 483
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 102/257 (39%), Gaps = 44/257 (17%)
Query: 248 FDWAWSVCEKMIE-------------------TGSLPDSEKVGKIISWFCKGGKAKEAHV 288
F+ A SV E+MIE G D G + + G +EA
Sbjct: 113 FEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVF 172
Query: 289 VYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML-DDFSGEARK---YAIKPFSSV 344
V++ + ++ P S L+ +L + + LD+ D + G + + +K + +
Sbjct: 173 VFSSSMGLELVPRLSRCKVLLDALLRWNR-----LDLFWDVYKGMVERNVVFDVKTYHML 227
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
I + CR +V K +L K E A N + A+++ + M +GL
Sbjct: 228 IIAHCRAGNVQLGKDVLFKTEKEFR---TATLN-----------VDGALKLKESMICKGL 273
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
P YTY L+ G ++E+A +L E L TY LI G K D A
Sbjct: 274 VPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKG 333
Query: 465 LLNEMKDVGVQPNVDEY 481
L++EM G+ N+ Y
Sbjct: 334 LVHEMVSHGI--NIKPY 348
>gi|357480939|ref|XP_003610755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512090|gb|AES93713.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 596
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/453 (23%), Positives = 191/453 (42%), Gaps = 69/453 (15%)
Query: 49 LSESPAANPKDESSFSPETDFSSRSFGENEYAQMDPSADAVESKEEEAYEIDGDKLENVL 108
S+ P + D+ P S + ++ Q P A S EE + D +K+ L
Sbjct: 98 FSDKPTPSNSDDDFVIP----SLAHWVDSSILQTKPKLFAKPSLEESIHLEDVEKISTFL 153
Query: 109 SLLQSSVDGYLESSLDSFELDLHEDFVLKVLETPLVLGENLVC---FFKW---------- 155
+ S ++ +LD + V++VL+ G + V FF W
Sbjct: 154 KEQRHSSHDHVVQALDGSGFRVSNSLVMQVLKR---FGNDWVAAYGFFIWAKKQTPYVHS 210
Query: 156 --VTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKG 213
V + +VD L KA KE +W +VKE+ E G + ++ +++++ F+K +
Sbjct: 211 PEVYNLMVDILGKA-------KEFDLMWKLVKEMKRIE-GYVCLDTMSKVMRRFAKAQRH 262
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLP-DSEKVGK 272
+ A E F G YG + ++AL + + + A +V ++ S+P S
Sbjct: 263 EDAVEAFRGMGKYGVEKDTAALNKLLDALVKGQSIEIAHNVLDEF--KSSVPLSSPSFNI 320
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
+I+ +CK ++A V +E P D F+
Sbjct: 321 LINGWCKVRNFEKARKVMEERKEHGFEP--------------------------DVFT-- 352
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
+++ I S C KD +L +M G PP + ++ Y KAG ++ A
Sbjct: 353 --------YNNFIESYCHDKDFRKVDEVLEEMRGNGCPPNAVTYTILLLGYGKAGQLSKA 404
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
+E + M+ G+ PD Y+ LM G++++ACE+ ++ K VTY+T+I
Sbjct: 405 LEEYERMKKDGIVPDTPFYSSLMYILGKAGRLKDACEVFDDMPKQGVVRDVVTYNTMIST 464
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
C + + AL+LL EM++ +P++ Y+ L+
Sbjct: 465 ACAHSKEETALRLLKEMEETSCKPDLQTYHPLL 497
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 76/142 (53%), Gaps = 2/142 (1%)
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
V+ ++KA A+E + M G++ D L+ G +E A +L+E K +
Sbjct: 252 VMRRFAKAQRHEDAVEAFRGMGKYGVEKDTAALNKLLDALVKGQSIEIAHNVLDEFKSSV 311
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
SP +++ LI G+CK+ F+ A K++ E K+ G +P+V YN I+S C D+R
Sbjct: 312 PLSSP-SFNILINGWCKVRNFEKARKVMEERKEHGFEPDVFTYNNFIESYCHDK-DFRKV 369
Query: 499 EKLLEDMRLKGLHLNGITRALI 520
+++LE+MR G N +T ++
Sbjct: 370 DEVLEEMRGNGCPPNAVTYTIL 391
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 96/234 (41%), Gaps = 1/234 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N LI + K+ + A +V + ++G + TY IE+ K F V E+M
Sbjct: 318 FNILINGWCKVRNFEKARKVMEERKEHGFEPDVFTYNNFIESYCHDKDFRKVDEVLEEMR 377
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
G P++ ++ + K G+ +A Y ++ + P + L+ L + +
Sbjct: 378 GNGCPPNAVTYTILLLGYGKAGQLSKALEEYERMKKDGIVPDTPFYSSLMYILGKAGR-L 436
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
K A ++ DD + + ++++I + C A LL +M P ++ +
Sbjct: 437 KDACEVFDDMPKQGVVRDVVTYNTMISTACAHSKEETALRLLKEMEETSCKPDLQTYHPL 496
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+ K M +L M L PD TYT L+ +N G++ EAC E
Sbjct: 497 LKMCCKKKRMKVLKFLLDHMFKHDLCPDRGTYTLLVQSLSNSGKLVEACTFFEE 550
>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
Length = 556
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 122/264 (46%), Gaps = 2/264 (0%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
N T+ I+A R+ A + M++ G PD +IS C G EA ++
Sbjct: 293 NVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLF 352
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
E+ + P LI C+ + + A+ + ++ + I +SS+I LC+
Sbjct: 353 DTVFERGILPDVWSYTILIIGYCKC-KRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCK 411
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ A L S + ++GPPP +N +I A+ K D+ +E+ KLM +GL P V T
Sbjct: 412 SGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLT 471
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
Y L++GY ++ EA +L+ + + +TY++L G CK A +L M
Sbjct: 472 YNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMH 531
Query: 471 DVGVQPNVDEYNKLIQSLCLKALD 494
G +V YN L+ + C KA D
Sbjct: 532 VGGPPVDVATYNVLLDAFC-KAQD 554
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 133/299 (44%), Gaps = 2/299 (0%)
Query: 192 KGVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDW 250
KGV ++ L+ I + LG+ AF V G N T ++ L
Sbjct: 113 KGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQK 172
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A + + G L D G +I+ CK G++ +A + + + P + +I
Sbjct: 173 AMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIID 232
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
S C+++ T K A D+ I ++S+IR CR K L+ +M+++
Sbjct: 233 SFCKDELTCK-ARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNIN 291
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P FN +I A+ + G M A M LM RG +PD+ T+ L+SG+ G + EA ++
Sbjct: 292 PNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKL 351
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + +Y LI GYCK + D A+ L NEM+ + ++ Y+ LI LC
Sbjct: 352 FDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLC 410
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/484 (21%), Positives = 194/484 (40%), Gaps = 25/484 (5%)
Query: 41 SLYRSSRFLSESPAANPKDESSFSPETDFSSRSFGENEYAQMDPSADAVESKEEEAYEID 100
+ ++ RF S P N K SSF+ D + N M P ++ +
Sbjct: 40 AFHKFLRFFSHCPKQNAKILSSFNGIDDAVTLF---NHLINMQPLPSVIQFNTIIGSVVK 96
Query: 101 GDKLENVLSLLQSSVDGYLESSLDSFELDLH-------EDFVLKVLETPLVLGENLVCFF 153
+SLL+ V + S+ + + ++ F VL L G
Sbjct: 97 MKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQ----- 151
Query: 154 KWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEIL-NELIALFSKLGK 212
+ + ++K +C + EV D + + G+L E+ LI K+G+
Sbjct: 152 --PNNITLTTVMKGLCIN---GEVQKAMDFHDNVAAQ--GMLLDEVCYGTLINGLCKIGR 204
Query: 213 GKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGK 272
AF++ + N Y I++ + ++ A + K+++ G PD
Sbjct: 205 SIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTS 264
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
+I FC+ G+ E + K + P LI + C++ + ++ A M +
Sbjct: 265 LIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIE-AQGMFNLMVKR 323
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
++ I F+++I C +V A+ L + G P + +I Y K + A
Sbjct: 324 GQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEA 383
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
+ + MR + + D+ Y+ L+ G G++ A E+ + + + +TY+ LI
Sbjct: 384 VSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDA 443
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
+CK+++ D ++L M G+ P V YN LI C K+ R A LL M+ K L
Sbjct: 444 FCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYC-KSKRIREAMNLLSVMQSKNLAP 502
Query: 513 NGIT 516
+ IT
Sbjct: 503 DSIT 506
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 81/200 (40%), Gaps = 2/200 (1%)
Query: 191 EKGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
E+G+L V LI + K + A +FN+ V + Y I+ L +
Sbjct: 357 ERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRIS 416
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
+AW + + G P+ +I FCK ++ L K + P LI
Sbjct: 417 YAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILI 476
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
+ C+ + ++ A+++L + ++S+ LC+ + A L M GP
Sbjct: 477 NGYCKS-KRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGP 535
Query: 370 PPGNAVFNSVISAYSKAGDM 389
P A +N ++ A+ KA D+
Sbjct: 536 PVDVATYNVLLDAFCKAQDV 555
>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
Length = 1595
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 125/262 (47%), Gaps = 9/262 (3%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
NQ +Y I R A + +M+ G PD G +I GK EA +V
Sbjct: 1152 NQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVR 1211
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIR 346
E++++P ++ LIS LC++ + A ++L+ E + ++P ++++I
Sbjct: 1212 EKMTERQVFPDVNIYNVLISGLCKK-RMLPAAKNILE----EMLEKNVQPDEFVYATLID 1266
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
R +++ A+ + M +G P N++I Y + G M+ A+ + MR G P
Sbjct: 1267 GFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIP 1326
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
D +TYT ++SGYA G + A L + K + + VTY +LI GYCK + D A L
Sbjct: 1327 DEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLF 1386
Query: 467 NEMKDVGVQPNVDEYNKLIQSL 488
M+ + PNV Y LI SL
Sbjct: 1387 ANMQAEALSPNVVTYTILIGSL 1408
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 148/347 (42%), Gaps = 11/347 (3%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGD-YGCVANQETYYFTIEALSRRKIFDWAWSV 254
T L L+A ++ G A E+ + + YG + ++ L ++ +D A +
Sbjct: 906 TRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKL 965
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
++M+ S D+ ++ C + +E + P LI C+
Sbjct: 966 YDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCR 1025
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
+ + L +L + + + S+I L + D+ +L +M G P
Sbjct: 1026 RGDMGR-GLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQ 1084
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
++NSVI A T AM +LK M + G PD+ T+ L++G + G + +A L EA
Sbjct: 1085 IYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREA 1144
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL---- 490
+ + ++Y LI G+C E A LL EM G P+V + LI L +
Sbjct: 1145 IRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKV 1204
Query: 491 -KALDWR---TAEKLLEDMRLKGLHLNGITRA-LIRAVKELEEDAIE 532
+AL R T ++ D+ + + ++G+ + ++ A K + E+ +E
Sbjct: 1205 SEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLE 1251
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 121/326 (37%), Gaps = 27/326 (8%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
GK A V K + + Y I L ++++ A ++ E+M+E PD
Sbjct: 1202 GKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVY 1261
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
+I F + +A ++ K + P +I CQ + L M
Sbjct: 1262 ATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCM----- 1316
Query: 331 GEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
RK P +++VI + +++GA L MI P ++S+I+ Y K
Sbjct: 1317 SNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKT 1376
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
GD A + M++ L P+V TYT L+ ++ A NH + VT
Sbjct: 1377 GDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTL 1436
Query: 447 HTLIRGY------------CKLEEFDCALKLLNEMK----DVGVQPNVDEYNKLIQSLCL 490
H L+ G C E LL K D+G P YN +I SLC
Sbjct: 1437 HYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIG-DPRNSAYNAIIFSLCR 1495
Query: 491 KALDWRTAEKLLEDMRLKGLHLNGIT 516
+ R A M KG N IT
Sbjct: 1496 HNM-LREALDFKNRMAKKGYVPNPIT 1520
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/270 (19%), Positives = 103/270 (38%), Gaps = 49/270 (18%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I + + G A + GC+ ++ TY I +++ + A MI+
Sbjct: 1297 NAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIK 1356
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
P+ +I+ +CK G A ++ + + + P LI SL ++D+ ++
Sbjct: 1357 RKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLR 1416
Query: 321 LAL---DMLDDFSGE---ARKYAIKPFSS----VIRSLC-RMKDVHGAKTLL---SKMIS 366
L ML + Y + +S VI S+C +VHG LL K++
Sbjct: 1417 AGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVF 1476
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
+ P N+ +N++I + + + A++ M +G P+
Sbjct: 1477 DIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPN------------------- 1517
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
P+T+ +L+ G+C +
Sbjct: 1518 ----------------PITFLSLLYGFCSV 1531
>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
Length = 621
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 136/314 (43%), Gaps = 2/314 (0%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
+ + G A VF GC+ TY + L + A +V M PD
Sbjct: 117 YCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPD 176
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
+ ++ C+ G+ +EA V+ A P V LI C E ++ AL +
Sbjct: 177 THVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGE-MEHALKVF 235
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
+ G ++ ++ +I LC+ V A L S+M+ G P + ++I
Sbjct: 236 EGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNE 295
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
G + A +L LM + GL P+ +T++ L+ ++EEA L K +++ V Y
Sbjct: 296 GHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVY 355
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
+LI G CK + D A +L+ +M G P+ Y+ LI LC + A +LEDM
Sbjct: 356 TSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLC-RQKKLSQATLMLEDMM 414
Query: 507 LKGLHLNGITRALI 520
KG+ + +T +I
Sbjct: 415 EKGIQASPVTYTII 428
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 127/294 (43%), Gaps = 9/294 (3%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+ + N LI + G+ + A +VF C N TY I L + + A +
Sbjct: 212 IVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFS 271
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M+E G P+ +I C G + A + L + P + LI +LC+ +
Sbjct: 272 RMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKRE 331
Query: 317 ETVKLALDMLDDFSGEARKYAIK----PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
+ + L F G K +K ++S+I LC+ + A L+ KMISEG P
Sbjct: 332 KVEEAQL-----FLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPD 386
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
++S+I + ++ A ML+ M +G++ TYT ++ E +I +
Sbjct: 387 AHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFD 446
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
+ VTY +R YC+ + A ++ +M D GV PN+ YN LI+
Sbjct: 447 KMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIR 500
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 127/297 (42%), Gaps = 3/297 (1%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
N Y I+ + A V E M P+ ++I CK GK + A V++
Sbjct: 211 NIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLF 270
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
+ E + P LI C E ++ A +L FS +I +LC+
Sbjct: 271 SRMVEAGLEPNVVTYTALIQGQCNEGH-LQCAFRLLHLMETNGLVPNDWTFSVLIDALCK 329
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ V A+ L ++ +G V+ S+I K G + A E+++ M S G PD ++
Sbjct: 330 REKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHS 389
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
Y+ L+ G ++ +A +L + + + SPVTY +I + + K+ ++M
Sbjct: 390 YSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMI 449
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAVKEL 526
G+ P++ Y ++S C + AE ++ M +G+ N +T LIR L
Sbjct: 450 ATGINPDIVTYTVFVRSYCEEG-RMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANL 505
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 120/283 (42%), Gaps = 2/283 (0%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
N TY I A A ++ G PDS + +C+ G A V+
Sbjct: 71 NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
L + L+ L V+ A+ + ++ +++++ LC
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAG-MVREAMAVFVGMRADSCAPDTHVYATMVHGLCE 189
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
A+ LL + +S G P V+N++I Y AG+M A+++ + M P+V T
Sbjct: 190 AGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRT 249
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
YT L+ G G++E A + + + + VTY LI+G C CA +LL+ M+
Sbjct: 250 YTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLME 309
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
G+ PN ++ LI +LC K A+ L + KG+ +N
Sbjct: 310 TNGLVPNDWTFSVLIDALC-KREKVEEAQLFLGSLVKKGVKVN 351
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 135/319 (42%), Gaps = 8/319 (2%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
L+ +C S + L+ + E G E V+T LI G + AF + +
Sbjct: 253 LIHGLCKSGKVERAMVLFSRMVEAG-LEPNVVT---YTALIQGQCNEGHLQCAFRLLHLM 308
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
G V N T+ I+AL +R+ + A +++ G + +I CK GK
Sbjct: 309 ETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKI 368
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
A + + P + LI LC++ + + L ML+D + + + ++
Sbjct: 369 DAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATL-MLEDMMEKGIQASPVTYTI 427
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
+I L R G K + KMI+ G P + + +Y + G M A M+ M RG
Sbjct: 428 IIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRG 487
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
+ P++ TY L+ GYAN G + +A + + +Y L+R K D ++
Sbjct: 488 VFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSV 547
Query: 464 KL--LNEMKDVGVQPNVDE 480
+ + +MKD+ + N DE
Sbjct: 548 DIWKIADMKDLQ-ESNYDE 565
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 4/152 (2%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
++ ++++ +L R + ++L S+M P + ++I+AY AGD+ A + L
Sbjct: 41 LRCLNTLLMALARHRMFPDMESLASRM----PARNLRTYTTLINAYCLAGDIPAAKQHLT 96
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
+ GL PD Y YT + GY G + AC + + TY L+ G
Sbjct: 97 SLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAG 156
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A+ + M+ P+ Y ++ LC
Sbjct: 157 MVREAMAVFVGMRADSCAPDTHVYATMVHGLC 188
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 129/264 (48%), Gaps = 2/264 (0%)
Query: 253 SVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSL 312
++ ++M+ G PD G +++ CK G A + + K+ P + +I L
Sbjct: 2 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 61
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
C+ + + AL++ + + + + +SS+I LC A LLS MI P
Sbjct: 62 CKY-KHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
F+++I A+ K G + A ++ M R + P + TY+ L++G+ +++EA ++
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
H VTY+TLI+G+CK + + +++ EM G+ N YN LIQ L +A
Sbjct: 181 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL-FQA 239
Query: 493 LDWRTAEKLLEDMRLKGLHLNGIT 516
D A+++ ++M G+ N +T
Sbjct: 240 GDCDMAQEIFKEMVSDGVPPNIMT 263
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 157/373 (42%), Gaps = 10/373 (2%)
Query: 151 CFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKL 210
C VT GVV + +C + L + +++ G+ E GVL I N +I K
Sbjct: 12 CQPDLVTYGVV---VNGLCKRGDTDLAFNLLNKMEQ-GKLEPGVL---IYNTIIDGLCKY 64
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
A +F + G N TY I L + A + MIE PD
Sbjct: 65 KHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTF 124
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
+I F K GK EA +Y ++ + P + LI+ C D + A M +
Sbjct: 125 SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR-LDEAKQMFEFMV 183
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
+ + ++++I+ C+ K V + +M G +N +I +AGD
Sbjct: 184 SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCD 243
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A E+ K M S G+ P++ TY L+ G G++E+A + +++ + TY+ +I
Sbjct: 244 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 303
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
G CK + + L + GV+P+V YN +I C K A+ L ++M+ G
Sbjct: 304 EGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKG-SKEEADALFKEMKEDGT 362
Query: 511 HLN-GITRALIRA 522
N G LIRA
Sbjct: 363 LPNSGCYNTLIRA 375
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 123/271 (45%), Gaps = 17/271 (6%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL-PDSEKVGKIISWFCKGGKAKE 285
GC + TY + L +R D A+++ KM E G L P II CK +
Sbjct: 11 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM-EQGKLEPGVLIYNTIIDGLCKYKHMDD 69
Query: 286 AHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKP-- 340
A ++ K + P + LIS LC + +L DM++ RK I P
Sbjct: 70 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE------RK--INPDV 121
Query: 341 --FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
FS++I + + + A+ L +M+ P ++S+I+ + + A +M +
Sbjct: 122 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 181
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M S+ PDV TY L+ G+ ++EE E+ E + + VTY+ LI+G + +
Sbjct: 182 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 241
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
D A ++ EM GV PN+ YN L+ LC
Sbjct: 242 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 272
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 2/227 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI F K + + EVF + G V N TY I+ L + D A + ++M+
Sbjct: 195 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 254
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ ++ CK GK ++A VV+ + KM P +I +C+ + V+
Sbjct: 255 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK-VE 313
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
D+ + S + K + ++++I CR A L +M +G P + +N++I
Sbjct: 314 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 373
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
A + GD + E++K MRS G D T GL++ + G+++++
Sbjct: 374 RARLRDGDREASAELIKEMRSCGFAGDAST-IGLVTNMLHDGRLDKS 419
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 114/271 (42%), Gaps = 1/271 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F K GK A +++++ + TY I D A + E M+
Sbjct: 127 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 186
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD +I FCK + +E V+ ++ + LI L Q + +A
Sbjct: 187 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC-DMA 245
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++ + + I +++++ LC+ + A + + P +N +I
Sbjct: 246 QEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 305
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
KAG + ++ + +G+KPDV Y ++SG+ G EEA + E K++ + +
Sbjct: 306 MCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPN 365
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
Y+TLIR + + + + +L+ EM+ G
Sbjct: 366 SGCYNTLIRARLRDGDREASAELIKEMRSCG 396
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 74/135 (54%), Gaps = 3/135 (2%)
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
M ++ M ++G +PD+ TY +++G G + A +LN+ ++ + Y+T+I G
Sbjct: 1 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
CK + D AL L EM+ G++PNV Y+ LI LC W A +LL DM + ++
Sbjct: 61 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYG-RWSDASRLLSDMIERKINP 119
Query: 513 NGIT-RALIRA-VKE 525
+ T ALI A VKE
Sbjct: 120 DVFTFSALIDAFVKE 134
>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
Length = 455
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 139/298 (46%), Gaps = 10/298 (3%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G N + A ++ + D A + KM + G PD+ G +I CK G+ +A
Sbjct: 25 GISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDALCKLGRVDDA 84
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FS 342
V + + + P V + L+ LC D+ K+ ++ E I P F+
Sbjct: 85 EVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKV-----EELFFEMLNVGIHPNIVFFN 139
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+++ +LC+ V + L+ + G P +N++I + AG + A ++L+ M S
Sbjct: 140 TILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSV 199
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
GLKP+ ++Y L+ GY G+++ A + + N VTY+T++ G + + F A
Sbjct: 200 GLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEA 259
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
+L M + G + + YN ++ LC K+ A K+ + + KGL LN IT ++
Sbjct: 260 KELYLNMINSGTKWGIYTYNTILNGLC-KSNCVDEAFKMFQSLCSKGLQLNIITFTIM 316
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 151/343 (44%), Gaps = 3/343 (0%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
I N + ++K G A ++FNK +G + +Y I+AL + D A +
Sbjct: 31 HIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDALCKLGRVDDAEVKFNQ 90
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
MI G P+ ++ C K ++ ++ ++P ++ +LC+E
Sbjct: 91 MINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGR 150
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
++ ++D + + ++++I C + A LL M+S G P + +N
Sbjct: 151 VME-GQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYN 209
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+++ Y KAG + A + + M S G+ P V TY ++ G + EA E+ +
Sbjct: 210 TLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINS 269
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
++ TY+T++ G CK D A K+ + G+Q N+ + +I +L LK
Sbjct: 270 GTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGAL-LKGGRKED 328
Query: 498 AEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIENGEALVEA 540
A L + GL + +T ++ A +EE ++E ++L A
Sbjct: 329 AMDLFAAIPANGLVPDVVTYRVV-AENLIEEGSLEEFDSLFSA 370
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 103/235 (43%), Gaps = 9/235 (3%)
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ--- 314
M+ G P+ S + K G +A ++ R+ + P LI +LC+
Sbjct: 21 MVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDALCKLGR 80
Query: 315 -EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
+D VK + E I FSS++ LC + + L +M++ G P
Sbjct: 81 VDDAEVKF-----NQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNI 135
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
FN+++ K G + ++ + G++PDV +Y L+ G+ G ++EA ++L
Sbjct: 136 VFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEG 195
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ + +Y+TL+ GYCK D A L +M G+ P V YN ++ L
Sbjct: 196 MVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGL 250
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 72/130 (55%)
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
LL+ M++ G P + +FN SAY+K G + AM++ MR GL PD +Y L+
Sbjct: 17 LLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDALC 76
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
G++++A N+ + V + +L+ G C +++++ +L EM +VG+ PN+
Sbjct: 77 KLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIV 136
Query: 480 EYNKLIQSLC 489
+N ++ +LC
Sbjct: 137 FFNTILCNLC 146
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 71/136 (52%), Gaps = 3/136 (2%)
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
++ Y G ++ ++L LM + G+ P+ + + S YA G +++A +I N+ +++
Sbjct: 1 MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 60
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD-WRT 497
V+Y LI CKL D A N+M + GV PN+ ++ L+ LC ++D W
Sbjct: 61 LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLC--SIDKWEK 118
Query: 498 AEKLLEDMRLKGLHLN 513
E+L +M G+H N
Sbjct: 119 VEELFFEMLNVGIHPN 134
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 101/258 (39%), Gaps = 42/258 (16%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
+Y I+ D A + E M+ G P+S ++ +CK G+ A+ ++
Sbjct: 172 SYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKM 231
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
+ P + +++++ L + K
Sbjct: 232 LSNGITP------------------------------------GVVTYNTILHGLFQTKR 255
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
AK L MI+ G G +N++++ K+ + A +M + + S+GL+ ++ T+T
Sbjct: 256 FSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTI 315
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK---LEEFDCALKLLNEMK 470
++ GG+ E+A ++ N VTY + + LEEFD L + M+
Sbjct: 316 MIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFD---SLFSAME 372
Query: 471 DVGVQPNVDEYNKLIQSL 488
G PN N L++ L
Sbjct: 373 KNGTAPNSQMLNALVRRL 390
>gi|15222491|ref|NP_176550.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|332195999|gb|AEE34120.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 257
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 112/234 (47%), Gaps = 2/234 (0%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
I+ CK G A ++T EK ++P +I S C A +L +
Sbjct: 16 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSD-ADQLLRHMIEK 74
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
I FS++I + + + V A+ + +M+ P +NS+I + K + A
Sbjct: 75 QINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDA 134
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
ML M S+G PDV T++ L++GY +++ EI E + + VTY TLI G
Sbjct: 135 KRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHG 194
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
+C++ + D A LLNEM GV P+ ++ ++ LC K + R A +LED++
Sbjct: 195 FCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKK-ELRKAFAILEDLQ 247
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 93/175 (53%), Gaps = 1/175 (0%)
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
++++ LC+ + A+ L ++M +G P +N +I ++ +G + A ++L+ M
Sbjct: 14 TAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIE 73
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
+ + PD+ T++ L++ + ++ EA EI E + + +TY+++I G+CK + D
Sbjct: 74 KQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDD 133
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A ++L+ M G P+V ++ LI C KA ++ +M +G+ N +T
Sbjct: 134 AKRMLDSMASKGCSPDVVTFSTLINGYC-KAKRVDNGMEIFCEMHRRGIVANTVT 187
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 102/241 (42%), Gaps = 1/241 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V I ++ K G A +F + + G N TY I++ + A +
Sbjct: 10 VVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLR 69
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
MIE PD +I+ F K K EA +Y ++P +I C++D
Sbjct: 70 HMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQD 129
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
V A MLD + + + FS++I C+ K V + +M G +
Sbjct: 130 R-VDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTY 188
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
++I + + GD+ A ++L M S G+ PD T+ +++G + ++ +A IL + +K
Sbjct: 189 TTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
Query: 437 N 437
+
Sbjct: 249 S 249
>gi|242064536|ref|XP_002453557.1| hypothetical protein SORBIDRAFT_04g008050 [Sorghum bicolor]
gi|241933388|gb|EES06533.1| hypothetical protein SORBIDRAFT_04g008050 [Sorghum bicolor]
Length = 390
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 149/351 (42%), Gaps = 36/351 (10%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + K GK + GCV N Y IEAL + K+ D A + KMIE+
Sbjct: 16 LIRMSGKAGKATKFVSFLEEMVSKGCVLNLIAYNTVIEALGKNKMVDKAIFMLSKMIESD 75
Query: 263 SLPDS----------------EKVGKI----------------ISWFCKGGKAKEAHVVY 290
P+ ++ +I + CK G A EAH V+
Sbjct: 76 CQPNQFTYSIMLDVLATGGQLHRLNEILDICSGHLNRSVYSYLVKALCKSGHASEAHSVF 135
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
+ ++ +LC ++T + A+D+L + + ++ + +L +
Sbjct: 136 CRMWSSHEKGDRDAFVSMLEALCNAEKTAE-AIDLLHMMPEKGITTDVGMYNIIFSALGK 194
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+K V +L KM + G P +N +IS++ + G + A E+ + M KPDV T
Sbjct: 195 LKQVSFMSSLYDKMKANGVAPDVFTYNIMISSFGRVGLVDKASELFEEMDDSSCKPDVIT 254
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
Y +++ G ++EA + + ++ TY LI + K + D A L +EM
Sbjct: 255 YNSMINCLGKNGDLDEAHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEMI 314
Query: 471 DVGVQPNVDEYNKLIQSLCL-KALDWRTAEKLLEDMRLKGLHLNGITRALI 520
G PN+ YN L+ CL + R A KL E ++ +GL + IT +++
Sbjct: 315 AQGCVPNIVTYNILLD--CLERHGKTREAHKLYETLKQQGLAPDSITYSIL 363
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 42/90 (46%)
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M+ PD YTYT L+ G+ + L E L+ + Y+T+I K +
Sbjct: 1 MKQNNCDPDAYTYTILIRMSGKAGKATKFVSFLEEMVSKGCVLNLIAYNTVIEALGKNKM 60
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
D A+ +L++M + QPN Y+ ++ L
Sbjct: 61 VDKAIFMLSKMIESDCQPNQFTYSIMLDVL 90
>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
Length = 621
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 136/314 (43%), Gaps = 2/314 (0%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
+ + G A VF GC+ TY + L + A +V M PD
Sbjct: 117 YCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPD 176
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
+ ++ C+ G+ +EA V+ A P V LI C E ++ AL +
Sbjct: 177 THVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGE-MEHALKVF 235
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
+ G ++ ++ +I LC+ V A L S+M+ G P + ++I
Sbjct: 236 EGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNE 295
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
G + A +L LM + GL P+ +T++ L+ ++EEA L K +++ V Y
Sbjct: 296 GHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVY 355
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
+LI G CK + D A +L+ +M G P+ Y+ LI LC + A +LEDM
Sbjct: 356 TSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLC-RQKKLSQATLMLEDMM 414
Query: 507 LKGLHLNGITRALI 520
KG+ + +T +I
Sbjct: 415 EKGIQASPVTYTII 428
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 154/386 (39%), Gaps = 59/386 (15%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+ + N LI + G+ + A +VF C N TY I L + + A +
Sbjct: 212 IVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFS 271
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M+E G P+ +I C G + A + L + P + LI +LC+ +
Sbjct: 272 RMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKRE 331
Query: 317 ETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
+ + L F G K +K ++S+I LC+ + A L+ KMISEG P
Sbjct: 332 KVEEAQL-----FLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPD 386
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK--------------------------- 405
++S+I + ++ A ML+ M +G++
Sbjct: 387 AHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFD 446
Query: 406 --------PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
PD+ TYT + Y G+ME+A ++ + + VTY+TLIRGY L
Sbjct: 447 KMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLG 506
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD------WRTAEK-----LLEDMR 506
A M G +PN D Y L++ + K+ W+ A+ LLED+
Sbjct: 507 LVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDIT 566
Query: 507 LKGLHLNG-ITRALIRA---VKELEE 528
+ L L I IR V LEE
Sbjct: 567 ERQLPLAADIYSCFIRCLCRVDRLEE 592
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 127/297 (42%), Gaps = 3/297 (1%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
N Y I+ + A V E M P+ ++I CK GK + A V++
Sbjct: 211 NIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLF 270
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
+ E + P LI C E ++ A +L FS +I +LC+
Sbjct: 271 SRMVEAGLEPNVVTYTALIQGQCNEGH-LQCAFRLLHLMETNGLVPNDWTFSVLIDALCK 329
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ V A+ L ++ +G V+ S+I K G + A E+++ M S G PD ++
Sbjct: 330 REKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHS 389
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
Y+ L+ G ++ +A +L + + + SPVTY +I + + K+ ++M
Sbjct: 390 YSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMI 449
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAVKEL 526
G+ P++ Y ++S C + AE ++ M +G+ N +T LIR L
Sbjct: 450 ATGINPDIVTYTVFVRSYCEEG-RMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANL 505
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 121/285 (42%), Gaps = 2/285 (0%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
N TY I A A ++ G PDS + +C+ G A V+
Sbjct: 71 NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
L + L+ L V+ A+ + ++ +++++ LC
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAG-MVREAMTVFVGMRADSCAPDTHVYATMVHGLCE 189
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
A+ LL + +S G P V+N++I Y AG+M A+++ + M P+V T
Sbjct: 190 AGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRT 249
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
YT L+ G G++E A + + + + VTY LI+G C CA +LL+ M+
Sbjct: 250 YTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLME 309
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
G+ PN ++ LI +LC K A+ L + KG+ +N +
Sbjct: 310 TNGLVPNDWTFSVLIDALC-KREKVEEAQLFLGSLVKKGVKVNEV 353
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 113/264 (42%), Gaps = 5/264 (1%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
L+ +C S + L+ + E G E V+T LI G + AF + +
Sbjct: 253 LIHGLCKSGKVERAMVLFSRMVEAG-LEPNVVT---YTALIQGQCNEGHLQCAFRLLHLM 308
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
G V N T+ I+AL +R+ + A +++ G + +I CK GK
Sbjct: 309 ETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKI 368
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
A + + P + LI LC++ + + L ML+D + + + ++
Sbjct: 369 DAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATL-MLEDMMEKGIQASPVTYTI 427
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
+I L R G K + KMI+ G P + + +Y + G M A M+ M RG
Sbjct: 428 IIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRG 487
Query: 404 LKPDVYTYTGLMSGYANGGQMEEA 427
+ P++ TY L+ GYAN G + +A
Sbjct: 488 VFPNLVTYNTLIRGYANLGLVSQA 511
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 4/152 (2%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
++ ++++ +L R + ++L S+M P + ++I+AY AGD+ A + L
Sbjct: 41 LRCLNTLLMALARHRMFPDMESLASRM----PARNLRTYTTLINAYCLAGDIPAAKQHLT 96
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
+ GL PD Y YT + GY G + AC + + TY L+ G
Sbjct: 97 SLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAG 156
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A+ + M+ P+ Y ++ LC
Sbjct: 157 MVREAMTVFVGMRADSCAPDTHVYATMVHGLC 188
Score = 38.9 bits (89), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 88/229 (38%), Gaps = 15/229 (6%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L+ +C + + + + E G + V I++EL+ G K +F+K
Sbjct: 392 SLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKK----IFDK 447
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + TY + + + A S+ +M++ G P+ +I + G
Sbjct: 448 MIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGL 507
Query: 283 AKEAHVVYTLAREKKMYPPQ---SVVAFLISSLCQEDETVKL--ALDM------LDDFSG 331
+A + + K P + +V+ L+ D +V + DM L+D +
Sbjct: 508 VSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITE 567
Query: 332 EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A +S IR LCR+ + AK M + P V+ S+I
Sbjct: 568 RQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSII 616
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 138/310 (44%), Gaps = 5/310 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F K A F K G + T+ + L A ++ +M ET
Sbjct: 120 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P+ +++ C+ G+ EA + E + P Q ++ +C++ +TV A
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS-A 238
Query: 323 LDMLDDFSGEARKYA-IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
L++L + + +S++I SLC+ A+ L ++M +G P +NS+I
Sbjct: 239 LNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIV 298
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
+ +G + A ++L+ M R + PDV TY L++ + G+ EA E+ +E
Sbjct: 299 GFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC-LKALDWRTAEK 500
+ +TY ++I G+CK D A + M G PN+ +N LI C K +D +
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID--DGME 416
Query: 501 LLEDMRLKGL 510
LL +M GL
Sbjct: 417 LLHEMTETGL 426
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 149/334 (44%), Gaps = 16/334 (4%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ LL +C E L+ + E + V ++N L + G+ A + +
Sbjct: 153 NTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGL----CREGRIVEAVALLD 208
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL-PDSEKVGKIISWFCKG 280
+ + G Q TY ++ + ++ A ++ KM E + P+ II CK
Sbjct: 209 RMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKD 268
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYA 337
G+ +A ++T +EK ++P +I C + +L +ML+ RK +
Sbjct: 269 GRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLE------RKIS 322
Query: 338 --IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+ ++++I + + A+ L +M+ G P ++S+I + K + A M
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
LM ++G P++ T+ L+ GY ++++ E+L+E + TY+TLI G+
Sbjct: 383 FYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + + AL LL EM G+ P++ + L+ LC
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 131/322 (40%), Gaps = 25/322 (7%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I F K + AA +F GC N T+ I+ K D + +M ETG
Sbjct: 366 MIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+ D+ +I F G A + + P L+ LC ++ +K A
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC-DNGKLKDA 484
Query: 323 LDMLDDFSGEARKY-AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP------------ 369
L+M + A PF+ V DV L+S +I+EG
Sbjct: 485 LEMFKVMQKSKKDLDASHPFNGV------EPDVQTYNILISGLINEGKFLEAEELYEEMP 538
Query: 370 ----PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
P ++S+I K + A +M M S+ P+V T+T L++GY G+++
Sbjct: 539 HRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVD 598
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
+ E+ E + + +TY TLI G+ K+ + AL + EM GV P+ ++
Sbjct: 599 DGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 658
Query: 486 QSLCLKALDWRTAEKLLEDMRL 507
L K + + A +LE +++
Sbjct: 659 TGLWSKE-ELKRAVAMLEKLQM 679
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 88/174 (50%), Gaps = 2/174 (1%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
I F+ +I+ C + A + K+ G P FN+++ ++ A+ +
Sbjct: 114 IYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFH 173
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M +P+V T+T LM+G G++ EA +L+ ++ + + +TY T++ G CK
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233
Query: 458 EFDCALKLLNEMKDVG-VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+ AL LL +M++V + PNV Y+ +I SLC K A+ L +M+ KG+
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLC-KDGRHSDAQNLFTEMQEKGI 286
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 5/172 (2%)
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+K + A L S M+ P P F ++ + + + + M + ++ D+Y+
Sbjct: 57 IKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYS 116
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
+T L+ + + ++ A + K VT++TL+ G C + AL L ++M
Sbjct: 117 FTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMF 176
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAE--KLLEDMRLKGLHLNGITRALI 520
+ +PNV + L+ LC + R E LL+ M GL IT I
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREG---RIVEAVALLDRMMEDGLQPTQITYGTI 225
>gi|6723418|emb|CAB66911.1| putative protein [Arabidopsis thaliana]
Length = 1184
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 176/403 (43%), Gaps = 9/403 (2%)
Query: 92 KEEEAYEIDGDKLENVLSLLQSSVDGYLESSLDSFELDLHEDFVLKVLETPLVLGENLVC 151
K E+ + + +K+ +L S V LE +L+ +DL +++VL G
Sbjct: 58 KHEDEFAGEVEKIYRILRNHHSRVPK-LELALNESGIDLRPGLIIRVLSRCGDAGNLGYR 116
Query: 152 FFKWVTSGVVDALLKAICSSV-----GKKEVYALWDIVKEIGEKEKGVLTVEILNELIAL 206
FF W T +C S+ ++ A+W +++E+ + ++ E+ L+
Sbjct: 117 FFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRR 176
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
F+ K A EV ++ YG ++ + ++AL + A V E M E P+
Sbjct: 177 FASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFP-PN 235
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
++ +C+ GK EA V +E + P V L+S + A D++
Sbjct: 236 LRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMAD-AYDLM 294
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRM-KDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSK 385
+D + + ++ +I++LCR K + A + +M G + ++IS + K
Sbjct: 295 NDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCK 354
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
G + +L MR +G+ P TY +M + Q EE E++ + K+ +
Sbjct: 355 WGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLI 414
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
Y+ +IR CKL E A++L NEM+ G+ P VD + +I
Sbjct: 415 YNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGF 457
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 150/323 (46%), Gaps = 43/323 (13%)
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
V ++ GD G + Y F + A + F ++ VC+ M+ I+S
Sbjct: 101 IRVLSRCGDAGNLG----YRFFLWATKQPGYFH-SYEVCKSMV------------MILS- 142
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEA 333
K ++ V+ L E + P+ + L L + VK A+++LD E
Sbjct: 143 -----KMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLD----EM 193
Query: 334 RKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
KY ++P F ++ +LC+ V A + M E PP F S++ + + G +
Sbjct: 194 PKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM-REKFPPNLRYFTSLLYGWCREGKL 252
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
A E+L M+ GL+PD+ +T L+SGYA+ G+M +A +++N+ +K + Y L
Sbjct: 253 MEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVL 312
Query: 450 IRGYCKLEE-FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK---LLEDM 505
I+ C+ E+ D A+++ EM+ G + ++ Y LI C W +K +L+DM
Sbjct: 313 IQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFC----KWGMIDKGYSVLDDM 368
Query: 506 RLKGLHLNGITRALIRAVKELEE 528
R KG+ + +T I E +E
Sbjct: 369 RKKGVMPSQVTYMQIMVAHEKKE 391
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 124/297 (41%), Gaps = 6/297 (2%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSR-RKIFDWAWSVC 255
+ + L++ ++ GK A+++ N G N Y I+AL R K D A V
Sbjct: 271 IVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVF 330
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+M G D +IS FCK G + + V R+K + P Q V I ++
Sbjct: 331 VEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQ-VTYMQIMVAHEK 389
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
E + L++++ + ++ VIR C++ +V A L ++M + G PG
Sbjct: 390 KEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDT 449
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGL--KPDVYTYTGLMSGYANGGQMEEACEILN- 432
F +I+ ++ G + A K M SRG+ P T L++ ++E A ++ +
Sbjct: 450 FVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSC 509
Query: 433 -EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
K + L+ + I A +M ++ + P + Y KL++ L
Sbjct: 510 ISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGL 566
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 161/386 (41%), Gaps = 49/386 (12%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
L+K +C K++ D V + V +LN L K G+ + A ++
Sbjct: 85 TLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGL----CKTGETRCAIKLLRM 140
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
D N Y I+ L + K+ + A+ + +M P+ +I FC G+
Sbjct: 141 IEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQ 200
Query: 283 AKEAHVVYTLARE---KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
A ++L E K + P + LI +LC+E + K + Y+
Sbjct: 201 LMGA---FSLLHEMILKNINPDVYTFSILIDALCKEGKNAKQIFHAMVQMGVNPNVYS-- 255
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK-- 397
++ +I LC+ K V A LL +M+ + P +NS+I K+G +T A+ ++
Sbjct: 256 -YNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEM 314
Query: 398 ---------------------------------LMRSRGLKPDVYTYTGLMSGYANGGQM 424
M+ RG++P +YTYT L+ G GG++
Sbjct: 315 HHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRL 374
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
+ A E+ + TY +I G CK FD AL + ++M+D G PN + +
Sbjct: 375 KNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEII 434
Query: 485 IQSLCLKALDWRTAEKLLEDMRLKGL 510
I+SL K + + AEKLL +M KGL
Sbjct: 435 IRSLFEKDENDK-AEKLLHEMIAKGL 459
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 125/260 (48%), Gaps = 4/260 (1%)
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
+++S+ K+++ G P++ ++ C G+ K+ + + Q L+
Sbjct: 63 FSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLL 122
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
+ LC+ ET + A+ +L + + + +S++I LC+ K V+ A L S+M +
Sbjct: 123 NGLCKTGET-RCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREI 181
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
P +N++I A+ AG + A +L M + + PDVYT++ L+ G+ A +
Sbjct: 182 FPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQ 239
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
I + + + +Y+ +I G CK + D A+ LL EM + P+ YN LI LC
Sbjct: 240 IFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLC 299
Query: 490 LKALDWRTAEKLLEDMRLKG 509
K+ +A L+ +M +G
Sbjct: 300 -KSGRITSALNLMNEMHHRG 318
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 74/152 (48%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
I F+ ++ SL ++K +L +M +G + +I+ + G M + +L
Sbjct: 10 IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLG 69
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
+ G P+ T+T LM G G++++ ++ + + V+Y TL+ G CK
Sbjct: 70 KILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTG 129
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
E CA+KLL ++D +PNV Y+ +I LC
Sbjct: 130 ETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLC 161
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 87/173 (50%), Gaps = 3/173 (1%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++++++ LC +V K++++ + ++++ K G+ A+++L+++
Sbjct: 83 WTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIE 142
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
R +P+V Y+ ++ G + EA ++ +E + +TY+TLI +C +
Sbjct: 143 DRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLM 202
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
A LL+EM + P+V ++ LI +LC + + A+++ M G++ N
Sbjct: 203 GAFSLLHEMILKNINPDVYTFSILIDALCKEG---KNAKQIFHAMVQMGVNPN 252
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 1/171 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
S +I C + + + +LL K++ G P + +++ G++ + +
Sbjct: 48 LSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVV 107
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
++ + + +Y L++G G+ A ++L + +R + V Y +I G CK + +
Sbjct: 108 AQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVN 167
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH 511
A L +EM + PNV YN LI + CL A A LL +M LK ++
Sbjct: 168 EAYDLYSEMDAREIFPNVITYNTLICAFCL-AGQLMGAFSLLHEMILKNIN 217
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 152/332 (45%), Gaps = 5/332 (1%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA 216
S + ++ +C + +E Y + D ++ G +LTV I+ + K K + A
Sbjct: 390 NSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAG-LFPNLLTVNIM---VDRLCKAKKFEPA 445
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
+E+F GC N TY I+ L ++ D A+ + E M++TG + +I
Sbjct: 446 YEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRN 505
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
F G+ ++ H ++ + P +++ + + + + K + +D G
Sbjct: 506 FFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEK-GRAIFEDIKGYGFLP 564
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
++ +S +I L + ++ M +G +N+V+ + K+G + A E+L
Sbjct: 565 DVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVL 624
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
+ M+ + + P V TY ++ G A +++EA + EAK L+ + Y +LI G+ K+
Sbjct: 625 EEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKV 684
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
D A +L EM G+ PNV +N L+ +L
Sbjct: 685 GRIDEAYLILEEMMKKGLTPNVYTWNSLMDAL 716
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 141/326 (43%), Gaps = 9/326 (2%)
Query: 167 AICSSVGKK----EVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
++ +GKK + Y L++ + + G V + LI F G+ + ++F +
Sbjct: 466 SLIDGLGKKGNVDDAYRLFENMLDTGHNANPV----VYTSLIRNFFMHGRKEDGHKIFKE 521
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
GC + ++ + + + ++ E + G LPD +I K G+
Sbjct: 522 MNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQ 581
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
A+E ++ +++ ++ C+ + K A ++L++ + + +
Sbjct: 582 ARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDK-AYEVLEEMKVKRVPPTVATYG 640
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
S+I L ++ + A L + S+G V++S+I + K G + A +L+ M +
Sbjct: 641 SIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKK 700
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
GL P+VYT+ LM ++ EA K+ + TY LI G C++++++ A
Sbjct: 701 GLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKA 760
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSL 488
EM+ G+ PNV Y +I L
Sbjct: 761 FVFWQEMQKQGLVPNVVTYTTMIAGL 786
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 149/344 (43%), Gaps = 9/344 (2%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+ +LN + K G + +F YG + + +Y I L++ S+
Sbjct: 531 LTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFH 590
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
M + G D+ ++ FCK GK +A+ V + K++ P + +I L + D
Sbjct: 591 AMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKID 650
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ A + ++ + + + +SS+I ++ + A +L +M+ +G P +
Sbjct: 651 R-LDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTW 709
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
NS++ A KA ++ A+ + M+ P+ YTY+ L++G + +A E +K
Sbjct: 710 NSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQK 769
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ VTY T+I G K+ A L K G P+ +N LI+ + A
Sbjct: 770 QGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMS-HANRAI 828
Query: 497 TAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIENGEALVEA 540
A + E+ RLKG +N +A I + DA+ E L +A
Sbjct: 829 EAYHVFEETRLKGCRIN--VKACISLL-----DALNKAECLEQA 865
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 113/235 (48%), Gaps = 1/235 (0%)
Query: 254 VCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC 313
V E+M G + ++S + + +A V R K P S LI ++
Sbjct: 134 VLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMA 193
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
+ + + AL++L + + F++++R+L R V GA L+ ++ P
Sbjct: 194 EARQPER-ALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDI 252
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
++N I + KAG++ A + ++S+GLKPD +YT ++ G++ EA E+ +
Sbjct: 253 VLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQ 312
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ + Y+T+I GY +F+ A KLL+++K+ G P+V +N ++ L
Sbjct: 313 METERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCL 367
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 121/313 (38%), Gaps = 3/313 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V + L+ ++ G+ + A + ++ + Y I+ + D AW
Sbjct: 217 VPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFH 276
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
++ G PD +I CK G+ EA ++ ++ P +I
Sbjct: 277 ELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAG 336
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ + A +LD ++ F+S++ L + + V A TL M + P ++ +
Sbjct: 337 Q-FENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEP-NSSTY 394
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N +I AG + A + M GL P++ T ++ + E A E+ A +
Sbjct: 395 NIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQ 454
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ VTY +LI G K D A +L M D G N Y LI++ +
Sbjct: 455 RGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRK-E 513
Query: 497 TAEKLLEDMRLKG 509
K+ ++M +G
Sbjct: 514 DGHKIFKEMNRRG 526
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 129/318 (40%), Gaps = 46/318 (14%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI ++ + + A E+ + + G + + AL+R + A ++ +++ +
Sbjct: 188 LIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSC 247
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD I F K G
Sbjct: 248 LEPDIVLYNVCIDCFGKAGN---------------------------------------- 267
Query: 323 LDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+DM F E + +KP ++S+I LC+ + A+ L +M +E P +N+
Sbjct: 268 VDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNT 327
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I Y AG A ++L ++ RG P V ++ +++ +++EA + EA K
Sbjct: 328 MIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLF-EAMKKD 386
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
+ + TY+ +I C + + A + +EM+ G+ PN+ N ++ LC KA + A
Sbjct: 387 AEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLC-KAKKFEPA 445
Query: 499 EKLLEDMRLKGLHLNGIT 516
++ E +G + N +T
Sbjct: 446 YEMFETASQRGCNPNSVT 463
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 80/164 (48%), Gaps = 1/164 (0%)
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+ ++ +L R + + A+ +++ M P + + +I A ++A A+E+L+ M+
Sbjct: 151 ADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQE 210
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G + V +T L+ A G++E A +++E K + V Y+ I + K D
Sbjct: 211 VGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDM 270
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
A K +E+K G++P+ Y +I LC KA AE+L M
Sbjct: 271 AWKFFHELKSQGLKPDDVSYTSMIWVLC-KAGRLSEAEELFGQM 313
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 79/180 (43%), Gaps = 9/180 (5%)
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
A+ PF S D+ + +L +M G N ++SA + + A ++
Sbjct: 119 AVLPFLS--------HDLAAMEKVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVI 170
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
MR +P YT L+ A Q E A E+L + ++ + + TL+R +
Sbjct: 171 AAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALARE 230
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ AL L++E+K ++P++ YN I KA + A K +++ +GL + ++
Sbjct: 231 GRVEGALALVDEVKGSCLEPDIVLYNVCIDCFG-KAGNVDMAWKFFHELKSQGLKPDDVS 289
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 142/318 (44%), Gaps = 2/318 (0%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
TV I N LI K+ + K A ++F++ + + TY I+ + + ++ V
Sbjct: 586 TVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVR 645
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
E+M P ++ K G ++A V T +++ P + L
Sbjct: 646 ERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSN 705
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
D+ AL + + K S ++ +LC+ + A+ +L + +++G P +
Sbjct: 706 DKA-DAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVL 764
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N++I YS+ GD+ A + M +G+KPD Y L+ + G ME A + +N+ K
Sbjct: 765 YNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMK 824
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
S TY+ LI GY + EFD LL EM+D G PNV Y LI LC K
Sbjct: 825 LKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLC-KGSKL 883
Query: 496 RTAEKLLEDMRLKGLHLN 513
A+ + DM +G+ N
Sbjct: 884 LEAQIVKRDMEDRGVSPN 901
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 149/320 (46%), Gaps = 10/320 (3%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI + K G + +F+V + + T+ ++ L + + + A +V +M +
Sbjct: 626 NTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKD 685
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G +PD+ + + KA A VY A + + + L+++LC+E + K
Sbjct: 686 QGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEK 745
Query: 321 LALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
++ G + P ++++I R D+ GA+ + M +G P + +
Sbjct: 746 A-----EEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAY 800
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N +I + + GDM A + + M+ +G+ P V TY L+ GY + ++ ++L E +
Sbjct: 801 NCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMED 860
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
N + + V+Y TLI CK + A + +M+D GV PNV YN LI C K
Sbjct: 861 NGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKG-KIE 919
Query: 497 TAEKLLEDMRLKGLHLNGIT 516
A + E+M KG+ LN +T
Sbjct: 920 DAFRFSEEMFKKGIELNLVT 939
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 140/317 (44%), Gaps = 14/317 (4%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N L+ K G + A V + D G V + T+ + S D A V E +
Sbjct: 660 FNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAV 719
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
++G ++ +++ CK G+ ++A + K + P + + +I ++ + V
Sbjct: 720 DSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLV 779
Query: 320 --KLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
++ +D ++ K +KP ++ +IR+ C + D+ A+ ++KM +G P
Sbjct: 780 GARMKIDAME-------KQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSV 832
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+N +I Y + + ++LK M G P+V +Y L++ G ++ EA + +
Sbjct: 833 ETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRD 892
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
+ + Y+ LI G C + + A + EM G++ N+ YN LI L +
Sbjct: 893 MEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNG- 951
Query: 494 DWRTAEKLLEDMRLKGL 510
AE +L ++ KGL
Sbjct: 952 KLAEAEDMLLEISRKGL 968
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 123/289 (42%), Gaps = 2/289 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
L+ K G+ + A E+ + G V N+ Y I+ SR+ A + M + G
Sbjct: 733 LLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQG 792
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD +I FC+ G + A + K + P LI ++ E K
Sbjct: 793 MKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDK-C 851
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
D+L + + + ++I LC+ + A+ + M G P ++N +I
Sbjct: 852 FDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDG 911
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
G + A + M +G++ ++ TY L+ G + G++ EA ++L E + +
Sbjct: 912 CCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPD 971
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
TY++LI GY + L EMK G++P + Y+ LI SLC K
Sbjct: 972 VFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLI-SLCTK 1019
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 157/378 (41%), Gaps = 72/378 (19%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI F +LG + A + NK G + ETY I R+ FD + + ++M +
Sbjct: 801 NCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMED 860
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G++P+ G +I+ CKG K EA +V ++ + P + LI C ++
Sbjct: 861 NGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDG-CCSKGKIE 919
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A ++ + + + ++++I L + A+ +L ++ +G P +NS+I
Sbjct: 920 DAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLI 979
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKP-------------------------------DVY 409
S Y AG++ + + + M++ G+KP D+
Sbjct: 980 SGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEGIELTKKIFGEMSLQPDLL 1039
Query: 410 TYTGLMSGYANGGQMEEA--------------------------------CEI---LNEA 434
Y G++ YA G M++A CE+ ++E
Sbjct: 1040 VYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEM 1099
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
K TY +++G+C+++++ A EM++ G+ +V ++L+ L +
Sbjct: 1100 KAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGL---KEE 1156
Query: 495 WRT--AEKLLEDMRLKGL 510
WR+ AE ++ +M + L
Sbjct: 1157 WRSKEAENVISEMNGRKL 1174
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 96/214 (44%), Gaps = 1/214 (0%)
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
L+S L E + + A D+ E + + ++ L + K + ++
Sbjct: 486 LLLSVLLNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILE 545
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
P ++ I A K D+ +E+ M+ + P V+ Y L+ G QM++
Sbjct: 546 SDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKD 605
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A ++ +E S +TY+TLI GYCK + + K+ MK ++P++ +N L++
Sbjct: 606 AEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLK 665
Query: 487 SLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
L KA AE +L +M+ +G + T +++
Sbjct: 666 GL-FKAGMVEDAENVLTEMKDQGFVPDAFTFSIL 698
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 92/197 (46%), Gaps = 9/197 (4%)
Query: 285 EAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE---TVKLALDMLD-DFSGEARKYAIKP 340
EA ++ R + ++P + L+ L + + T+ + L++L+ DF Y
Sbjct: 500 EAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYG--- 556
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
I++ ++ DV L ++M + P ++N +I K M A ++ M
Sbjct: 557 --KAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEML 614
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+R L P + TY L+ GY G E++ ++ K ++ S +T++TL++G K +
Sbjct: 615 ARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVE 674
Query: 461 CALKLLNEMKDVGVQPN 477
A +L EMKD G P+
Sbjct: 675 DAENVLTEMKDQGFVPD 691
>gi|29294052|gb|AAO73889.1| protein kinase family [Arabidopsis thaliana]
Length = 854
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 166/371 (44%), Gaps = 23/371 (6%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
+ +A++ A S + +++ +KE G K T N LI + K+GK + + +
Sbjct: 414 LFNAIINASSESGNLDQAMKIFEKMKESGCKP----TASTFNTLIKGYGKIGKLEESSRL 469
Query: 220 FNK-FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+ D N T ++A ++ + AW++ KM G PD + +
Sbjct: 470 LDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYA 529
Query: 279 KGGKAKEAH-VVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEAR 334
+ G A ++ K+ P +++ C+E +E ++ M +
Sbjct: 530 RIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM--------K 581
Query: 335 KYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
+ + P F+S+I+ + D+ G ++ M G P F+++++A+S GDM
Sbjct: 582 ELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMK 641
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
E+ M G+ PD++ ++ L GYA G+ E+A +ILN+ +K R + V Y +I
Sbjct: 642 RCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQII 701
Query: 451 RGYCKLEEFDCALKLLNEMKD-VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
G+C E A+++ +M VG+ PN+ Y LI W+ AE+LL+DM K
Sbjct: 702 SGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWK-AEELLKDMEGKN 760
Query: 510 LHLNGITRALI 520
+ T LI
Sbjct: 761 VVPTRKTMQLI 771
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 152/318 (47%), Gaps = 12/318 (3%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+++N LI + G+ + A +FN + G + TY + AL+R+K F S+
Sbjct: 346 TKLMNGLI----ERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLIS 401
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI---SSLC 313
K+ + G PD+ II+ + G +A ++ +E P S LI +
Sbjct: 402 KVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIG 461
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
+ +E+ +L ML D E + + + ++++ C + + A ++ KM S G P
Sbjct: 462 KLEESSRLLDMMLRD---EMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDV 518
Query: 374 AVFNSVISAYSKAGDMTPAMEM-LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
FN++ AY++ G A +M + M +KP+V T +++GY G+MEEA
Sbjct: 519 VTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFY 578
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
K+ + +++LI+G+ + + D ++++ M++ GV+P+V ++ L+ +
Sbjct: 579 RMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWS-SV 637
Query: 493 LDWRTAEKLLEDMRLKGL 510
D + E++ DM G+
Sbjct: 638 GDMKRCEEIYTDMLEGGI 655
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
DV + T LM+G G+ +EA I N + + S +TY TL+ + + F L L+
Sbjct: 341 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 400
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
++++ G++P+ +N +I + ++ + A K+ E M+ G
Sbjct: 401 SKVEKNGLKPDTILFNAIINA-SSESGNLDQAMKIFEKMKESG 442
>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 418
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 162/391 (41%), Gaps = 57/391 (14%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L++ + S GK A++ + +G K + + + L+ + + G A + F
Sbjct: 34 SLIRIVVSRKGKDSASAVFAAI--LGTKGTQRSDIYVFSGLMTAYLESGFVHDAIQCFRL 91
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ +T +E L + K F W ++++E G ++ FCK G+
Sbjct: 92 TKKHKFWVPFDTCRKVLEHLMKLKYFKLVWDFYKEILECGYPASLYFFNIVMHRFCKEGE 151
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAF----------------------------------- 307
+ A V+ + + P SVV+F
Sbjct: 152 MRRAQSVFDAITKWGLRP--SVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTY 209
Query: 308 --LISSLCQE---DETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAK 358
LI+ LC+E DE +L +MLD + P F+++I C+ V A
Sbjct: 210 SVLINGLCKESKVDEANELFNEMLDR--------GLVPNGVTFTTLIDVHCKNGMVDSAM 261
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+ +M+S+G P +N++I K GD+ ++ M GLKPD TYT L+ G
Sbjct: 262 EIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGC 321
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G +E A E K RL V Y L+ G C+ D A K+ EM VG++P+
Sbjct: 322 CKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPDN 381
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
Y +I C K D RTA +LL++M+ G
Sbjct: 382 GTYTMIINEFCKKG-DVRTASRLLKEMQRDG 411
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 119/244 (48%), Gaps = 2/244 (0%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
+++ + + G +A + L ++ K + P ++ L + + KL D +
Sbjct: 72 LMTAYLESGFVHDAIQCFRLTKKHKFWVPFDTCRKVLEHL-MKLKYFKLVWDFYKEILEC 130
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
++ F+ V+ C+ ++ A+++ + G P FN++++ Y + GD+
Sbjct: 131 GYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEG 190
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
+ M + G++PDVYTY+ L++G +++EA E+ NE + VT+ TLI
Sbjct: 191 FRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDV 250
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
+CK D A+++ +M G P++ YN LI LC K D + L+++M + GL
Sbjct: 251 HCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKG-DLKQVRALIDEMSMNGLKP 309
Query: 513 NGIT 516
+ IT
Sbjct: 310 DKIT 313
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 128/299 (42%), Gaps = 2/299 (0%)
Query: 180 LWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI 239
+WD KEI E ++ N ++ F K G+ + A VF+ +G + ++ +
Sbjct: 120 VWDFYKEILECGYPA-SLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLM 178
Query: 240 EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
R D + + M +G PD +I+ CK K EA+ ++ ++ +
Sbjct: 179 NGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLV 238
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P LI C+ + V A+++ + + ++++I LC+ D+ +
Sbjct: 239 PNGVTFTTLIDVHCK-NGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRA 297
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
L+ +M G P + ++I K GD+ A E K M ++ D YT L+SG
Sbjct: 298 LIDEMSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLC 357
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G+ ++A ++ E + TY +I +CK + A +LL EM+ G P V
Sbjct: 358 QEGRADDAEKMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDGHVPCV 416
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 1/208 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K K A E+FN+ D G V N T+ I+ + + D A + ++M+ G
Sbjct: 212 LINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQG 271
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD +I CK G K+ + + P + LI C+E + ++ A
Sbjct: 272 FSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGCCKEGD-LETA 330
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+ E+ + +++++ LC+ A+ + +M+S G P N + +I+
Sbjct: 331 FEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPDNGTYTMIINE 390
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ K GD+ A +LK M+ G P V T
Sbjct: 391 FCKKGDVRTASRLLKEMQRDGHVPCVVT 418
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 76/177 (42%), Gaps = 20/177 (11%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS-EGPPPGNAVFNSVISAYSKAGDMTPAM 393
++ + + ++I LC + + AK+L+ ++S +G +AVF +++
Sbjct: 10 RHTLHTYCTMIHFLCTHQMLLEAKSLIRIVVSRKGKDSASAVFAAILGTKGTQ------- 62
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
+ D+Y ++GLM+ Y G + +A + KK+ + T ++
Sbjct: 63 -----------RSDIYVFSGLMTAYLESGFVHDAIQCFRLTKKHKFWVPFDTCRKVLEHL 111
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
KL+ F E+ + G ++ +N ++ C K + R A+ + + + GL
Sbjct: 112 MKLKYFKLVWDFYKEILECGYPASLYFFNIVMHRFC-KEGEMRRAQSVFDAITKWGL 167
>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 550
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 125/286 (43%), Gaps = 1/286 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F LG+ + + D N TY I+AL ++ + A + MIE G
Sbjct: 259 LIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERG 318
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD ++S +C EA ++ E + P LI C+ + + A
Sbjct: 319 QRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNR-IDEA 377
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
L + + + + I +SS+I LC+ + A L S + GP P +N ++ A
Sbjct: 378 LSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDA 437
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
K + A+E+ LM RGL P+V +Y L++GY +++EA + E + +
Sbjct: 438 LCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPD 497
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
VTY+ LI G CK A +L N M D G +V YN L +
Sbjct: 498 SVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAF 543
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 128/284 (45%), Gaps = 11/284 (3%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ + A E + G + ++ TY I L + + A+ + KM P+
Sbjct: 162 GEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIY 221
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC---QEDETVKLALDMLD 327
I+ CK G EA +Y+ + + P LI C Q E +L DM+D
Sbjct: 222 NMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVD 281
Query: 328 DFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG 387
+ ++ +I +LC+ + A + + MI G P FN+++S Y
Sbjct: 282 ----RNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYN 337
Query: 388 DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VT 445
D+ A ++ G+ PDV++Y L+ GY +++EA + N K N+ +L+P VT
Sbjct: 338 DVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFN--KMNYKKLAPNIVT 395
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
Y +LI G CK A +L + + D G PNV YN ++ +LC
Sbjct: 396 YSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALC 439
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 114/510 (22%), Positives = 202/510 (39%), Gaps = 29/510 (5%)
Query: 15 NFGVATEKVHCSQTLSLNISRSLSKPSLYRSSRFLSESPAANPKDESSFSPETDFSSRSF 74
NFG ++ + T L ++SK S++ RF S+S N K +S F D +
Sbjct: 12 NFGRKAAMLYAATTTRL--RYAISKFSVFL--RFFSDSQKQNAKKKSGFDAIDDAVALF- 66
Query: 75 GENEYAQMDPSADAVESKEEEAYEIDGDKLENVLSLLQSSVDGYLESSLDSFELDL---- 130
M P VE + +SL + + S+ + + +
Sbjct: 67 --TRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYC 124
Query: 131 ---HEDFVLKVLETPLVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEI 187
H F VL L G L + + ++K +C + ++ D V
Sbjct: 125 HLGHMGFAFSVLGMVLKRGYQL-------NAITLTTIMKGLCINGEVRKALEFHDSVVA- 176
Query: 188 GEKEKGVLTVEI-LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRK 246
+G L E+ LI K+G + AFE+ +K N Y ++ L +
Sbjct: 177 ----QGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDG 232
Query: 247 IFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVA 306
+ A + ++ G PD +I FC G+ +E + ++ +
Sbjct: 233 LVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYN 292
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
LI +LC++ K A DM + ++ + F++++ C DV A+ L
Sbjct: 293 ILIDALCKKGMLGK-AHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAE 351
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
G P +N +I Y K + A+ + M + L P++ TY+ L+ G G++
Sbjct: 352 CGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISY 411
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A E+ + + +TY+ ++ CK++ D A++L N M + G+ PNV YN LI
Sbjct: 412 AWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILIN 471
Query: 487 SLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
C K+ A L E+M + L + +T
Sbjct: 472 GYC-KSKRIDEAMNLFEEMHRRNLVPDSVT 500
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 94/219 (42%), Gaps = 8/219 (3%)
Query: 240 EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
+ + RK+FD E G PD +I +CK + EA ++ KK+
Sbjct: 338 DVVEARKLFD-------TFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLA 390
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P + LI LC+ + A ++ + ++ ++ +LC+++ V A
Sbjct: 391 PNIVTYSSLIDGLCKSGR-ISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIE 449
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
L + M G P + +N +I+ Y K+ + AM + + M R L PD TY L+ G
Sbjct: 450 LFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLC 509
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
G++ A E+ N + +TY+ L + K++
Sbjct: 510 KSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSKIQH 548
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 10/149 (6%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEI--GEKEKGVLTVEILNELIALFSKLGKGKAAFEVF 220
+L+ +C S + YA W++ I G V+T I+ + + + K A E+F
Sbjct: 398 SLIDGLCKS--GRISYA-WELFSAIHDGGPSPNVITYNIMLDALCKIQLVDK---AIELF 451
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
N + G N +Y I + K D A ++ E+M +PDS +I CK
Sbjct: 452 NLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKS 511
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
G+ A ++ + + PP V+ + I
Sbjct: 512 GRISHAWELFNVMHDGG--PPVDVITYNI 538
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 153/338 (45%), Gaps = 8/338 (2%)
Query: 151 CFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKL 210
C+ +T + L++A C+ G + L D +++ G K V N LI K
Sbjct: 240 CYPDVITYTI---LIEATCNDSGVGQAMKLLDEMRKKGCKPD----VVTYNVLINGICKE 292
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ A + N YGC N T+ + ++ + A + M+ G P
Sbjct: 293 GRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTF 352
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
+I++ C+ A V + P L+ CQE + + A++ L+
Sbjct: 353 NILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDR-AIEYLEIMV 411
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
I +++++ +LC+ A +L+++ S+G P +N+VI +K G
Sbjct: 412 SRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTE 471
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A E+L+ MR +GLKPD+ TY+ L+ G G+++EA +I ++ + + S VTY+ ++
Sbjct: 472 YAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIM 531
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
G CK ++ A+ L M + G +P Y LI+ +
Sbjct: 532 LGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGI 569
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 119/284 (41%), Gaps = 51/284 (17%)
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
E+MI G +PD +I FC+ GK ++A + + P LI C+
Sbjct: 131 ERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKS 190
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
E K AL +L+ S P
Sbjct: 191 GEIDK-ALQVLERMS--------------------------------------VAPDVVT 211
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N+++ + +G + AME+L R PDV TYT L+ N + +A ++L+E +
Sbjct: 212 YNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMR 271
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
K + VTY+ LI G CK D A+K LN M G QPNV +N +++S+C W
Sbjct: 272 KKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTG-RW 330
Query: 496 RTAEKLLEDMRLKGLHLNGIT-----------RALIRAVKELEE 528
AE+LL DM KG + +T R L RA+ LE+
Sbjct: 331 MDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEK 374
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 40/349 (11%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F + GK + A + + G V + TY I + D A V E+M
Sbjct: 148 LIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---S 204
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD I+ C GK KEA V +++ YP LI + C D V A
Sbjct: 205 VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCN-DSGVGQA 263
Query: 323 LDMLDDFSGEARK-------------------------------YAIKP----FSSVIRS 347
+ +LD+ + K Y +P + ++RS
Sbjct: 264 MKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRS 323
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
+C A+ LL+ M+ +G P FN +I+ + + A+++L+ M G P+
Sbjct: 324 MCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPN 383
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
+Y L+ G+ +M+ A E L VTY+TL+ CK + D A+++LN
Sbjct: 384 SLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILN 443
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++ G P + YN +I L K A +LLE+MR KGL + IT
Sbjct: 444 QLSSKGCSPVLITYNTVIDGL-TKVGKTEYAAELLEEMRRKGLKPDIIT 491
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 43/213 (20%)
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
+R L R ++ L +MI +G P S+I + ++G A +++++ + G
Sbjct: 114 LRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGA 173
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYC---KLEEF 459
PDV TY L+ GY G++++A ++L ++P VTY+T++R C KL+E
Sbjct: 174 VPDVITYNVLIGGYCKSGEIDKALQVLERMS-----VAPDVVTYNTILRSLCDSGKLKEA 228
Query: 460 ----------DC----------------------ALKLLNEMKDVGVQPNVDEYNKLIQS 487
+C A+KLL+EM+ G +P+V YN LI
Sbjct: 229 MEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLING 288
Query: 488 LCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
+C K A K L +M L G N IT +I
Sbjct: 289 IC-KEGRLDEAIKFLNNMPLYGCQPNVITHNII 320
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 93/246 (37%), Gaps = 39/246 (15%)
Query: 194 VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWS 253
V+T IL + LG+ A +V K +GC+ N +Y + + K D A
Sbjct: 349 VVTFNILINFLCRKRLLGR---AIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIE 405
Query: 254 VCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA---------------HVVYTLA----- 293
E M+ G PD +++ CK GKA A + Y
Sbjct: 406 YLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLT 465
Query: 294 ---------------REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
R K + P + L+ L E + V A+ + D G + K +
Sbjct: 466 KVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGK-VDEAIKIFHDMEGLSIKPSA 524
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
+++++ LC+ + A L+ M+ +G P A + +I + G A+E+L
Sbjct: 525 VTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGIADEGLAEEALELLNE 584
Query: 399 MRSRGL 404
+ SRG
Sbjct: 585 LCSRGF 590
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 148/354 (41%), Gaps = 42/354 (11%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEI--GEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
LLK +C +E L ++ + G V++ N ++ F K G A+ ++
Sbjct: 169 LLKGLCDENRSQEALELLHMMADDRGGGSPPDVVS---YNTVLNGFFKEGDSDKAYSTYH 225
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ D G + + TY I AL + + D A V M++ G +PD I+ +C G
Sbjct: 226 EMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSG 285
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ KEA R + P + L++ LC+ S EARK
Sbjct: 286 QPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGR------------STEARK------ 327
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+ M G P A + +++ Y+ G + +L LM
Sbjct: 328 ------------------IFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVR 369
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G++PD + + L+ YA ++++A + ++ +++ + V Y T+I CK D
Sbjct: 370 NGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDD 429
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
A+ +M D G+ PN+ Y LI LC W AE+L+ +M +G+ LN I
Sbjct: 430 AMLYFEQMIDEGLTPNIIVYTSLIHGLC-TCDKWDKAEELILEMLDRGICLNTI 482
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 149/332 (44%), Gaps = 10/332 (3%)
Query: 163 ALLKAICSSVGKKEV--YALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVF 220
A+L C G+ ++ AL ++VK+ G + + +L L A A V
Sbjct: 96 AILIGCCCRAGRLDLGFAALGNVVKK-GFRVDAITFTPLLKGLCA---DKRTSDAMDIVL 151
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET---GSLPDSEKVGKIISWF 277
+ + GC+ + +Y ++ L A + M + GS PD +++ F
Sbjct: 152 RRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGF 211
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
K G + +A+ Y ++ + P + +I++LC+ K A+++L+
Sbjct: 212 FKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDK-AMEVLNTMVKNGVMPD 270
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
++S++ C A L KM S+G P ++S+++ K G T A ++
Sbjct: 271 CMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFD 330
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M RGL+PD+ TY L+ GYA G + E +L+ +N + ++ LI Y K E
Sbjct: 331 SMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQE 390
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ D A+ + ++M+ G+ PNV Y +I LC
Sbjct: 391 KVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLC 422
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 138/304 (45%), Gaps = 15/304 (4%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G + + I A ++++ D A V KM + G P+ G +I CK G +A
Sbjct: 371 GIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDA 430
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLC---QEDETVKLALDMLDDFSGEARKYAIKP--F 341
+ + ++ + P V LI LC + D+ +L L+MLD R + F
Sbjct: 431 MLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLD------RGICLNTIFF 484
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+S+I S C+ V ++ L M+ G P +N++I AG M A ++L M S
Sbjct: 485 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVS 544
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+KPD+ TY L++GY +M++A + E + + +TY+ +++G
Sbjct: 545 VGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAA 604
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD---WRTAEKL-LEDMRLKGLHLNGITR 517
A +L + G Q + YN ++ LC L R + L L D++L+ N +
Sbjct: 605 AKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 664
Query: 518 ALIR 521
AL++
Sbjct: 665 ALLK 668
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 120/285 (42%), Gaps = 8/285 (2%)
Query: 215 AAFEVFNKFGDYGC---VANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVG 271
AA +N+ G TY I R D ++ +++ G D+
Sbjct: 72 AAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFT 131
Query: 272 KIISWFCKGGKAKEA-HVVYTLAREKKMYPPQSVVAFLISSLCQED---ETVKLALDMLD 327
++ C + +A +V E P L+ LC E+ E ++L L M+
Sbjct: 132 PLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALEL-LHMMA 190
Query: 328 DFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG 387
D G + +++V+ + D A + +M+ G P ++S+I+A KA
Sbjct: 191 DDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQ 250
Query: 388 DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYH 447
M AME+L M G+ PD TY ++ GY + GQ +EA L + + + + VTY
Sbjct: 251 AMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYS 310
Query: 448 TLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
+L+ CK A K+ + M G++P++ Y L+Q K
Sbjct: 311 SLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKG 355
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 4/173 (2%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISE---GPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
++++++ LC A LL M + G PP +N+V++ + K GD A
Sbjct: 166 YNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYH 225
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M RG+ PDV TY+ +++ M++A E+LN KN +TY++++ GYC
Sbjct: 226 EMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSG 285
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+ A+ L +M+ GV+PNV Y+ L+ LC K A K+ + M +GL
Sbjct: 286 QPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLC-KNGRSTEARKIFDSMTKRGL 337
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 133/364 (36%), Gaps = 46/364 (12%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
LL+ + E++AL D++ G + + N LI ++K K A VF+K
Sbjct: 346 TLLQGYATKGALVEMHALLDLMVRNGIQPDH----HVFNILICAYAKQEKVDQAMLVFSK 401
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD---------------- 266
+G N Y I+ L + D A E+MI+ G P+
Sbjct: 402 MRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDK 461
Query: 267 ---SEKV----------------GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF 307
+E++ II CK G+ E+ ++ L + P
Sbjct: 462 WDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNT 521
Query: 308 LISSLC---QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM 364
LI C + DE KL M+ K I + ++I CR+ + A L +M
Sbjct: 522 LIDGCCLAGKMDEATKLLASMVS----VGVKPDIVTYGTLINGYCRVSRMDDALALFKEM 577
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
+S G P +N ++ A E+ + G + ++ TY ++ G
Sbjct: 578 VSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLT 637
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
+EA + +L T++ +I K D A L G+ P+V Y+ +
Sbjct: 638 DEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLM 697
Query: 485 IQSL 488
++L
Sbjct: 698 AENL 701
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/274 (18%), Positives = 105/274 (38%), Gaps = 4/274 (1%)
Query: 181 WDIVKEIGEK--EKGV-LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYF 237
WD +E+ + ++G+ L N +I K G+ + ++F+ G + TY
Sbjct: 462 WDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNT 521
Query: 238 TIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKK 297
I+ D A + M+ G PD G +I+ +C+ + +A ++
Sbjct: 522 LIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSG 581
Query: 298 MYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGA 357
+ P ++ L T A ++ + + + ++ ++ LC+ A
Sbjct: 582 VSPNIITYNIILQGLFHTRRTAA-AKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEA 640
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
+ + FN +I A K G M A ++ + GL PDV TY+ +
Sbjct: 641 LRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAEN 700
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
G +EE ++ ++N ++++R
Sbjct: 701 LIEQGSLEELDDLFLSMEENGCSADSRMLNSIVR 734
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 138/310 (44%), Gaps = 5/310 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F K A F K G + T+ + L A ++ +M ET
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P+ +++ C+ G+ EA + E + P Q ++ +C++ +TV A
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS-A 238
Query: 323 LDMLDDFSGEARKYA-IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
L++L + + +S++I SLC+ A+ L ++M +G P +NS+I
Sbjct: 239 LNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIV 298
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
+ +G + A ++L+ M R + PDV TY L++ + G+ EA E+ +E
Sbjct: 299 GFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC-LKALDWRTAEK 500
+ +TY ++I G+CK D A + M G PN+ +N LI C K +D +
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID--DGME 416
Query: 501 LLEDMRLKGL 510
LL +M GL
Sbjct: 417 LLHEMTETGL 426
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 149/334 (44%), Gaps = 16/334 (4%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ LL +C E L+ + E + V ++N L + G+ A + +
Sbjct: 153 NTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGL----CREGRIVEAVALLD 208
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL-PDSEKVGKIISWFCKG 280
+ + G Q TY ++ + ++ A ++ KM E + P+ II CK
Sbjct: 209 RMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKD 268
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYA 337
G+ +A ++T +EK ++P +I C + +L +ML+ RK +
Sbjct: 269 GRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLE------RKIS 322
Query: 338 --IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+ ++++I + + A+ L +M+ G P ++S+I + K + A M
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
LM ++G P++ T+ L+ GY ++++ E+L+E + TY+TLI G+
Sbjct: 383 FYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + + AL LL EM G+ P++ + L+ LC
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 131/322 (40%), Gaps = 25/322 (7%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I F K + AA +F GC N T+ I+ K D + +M ETG
Sbjct: 366 MIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+ D+ +I F G A + + P L+ LC ++ +K A
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC-DNGKLKDA 484
Query: 323 LDMLDDFSGEARKY-AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP------------ 369
L+M + A PF+ V DV L+S +I+EG
Sbjct: 485 LEMFKVMQKSKKDLDASHPFNGV------EPDVQTYNILISGLINEGKFLEAEELYEEMP 538
Query: 370 ----PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
P ++S+I K + A +M M S+ P+V T+T L++GY G+++
Sbjct: 539 HRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVD 598
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
+ E+ E + + +TY TLI G+ K+ + AL + EM GV P+ ++
Sbjct: 599 DGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 658
Query: 486 QSLCLKALDWRTAEKLLEDMRL 507
L K + + A +LE +++
Sbjct: 659 TGLWSKE-ELKRAVAMLEKLQM 679
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 88/174 (50%), Gaps = 2/174 (1%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
I F+ +I+ C + A + K+ G P FN+++ ++ A+ +
Sbjct: 114 IYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFH 173
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M +P+V T+T LM+G G++ EA +L+ ++ + + +TY T++ G CK
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233
Query: 458 EFDCALKLLNEMKDVG-VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+ AL LL +M++V + PNV Y+ +I SLC K A+ L +M+ KG+
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLC-KDGRHSDAQNLFTEMQEKGI 286
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 5/172 (2%)
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+K + A L S M+ P P F ++ + + + + M + ++ D+Y+
Sbjct: 57 IKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYS 116
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
+T L+ + + ++ A + K VT++TL+ G C + AL L ++M
Sbjct: 117 FTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMF 176
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAE--KLLEDMRLKGLHLNGITRALI 520
+ +PNV + L+ LC + R E LL+ M GL IT I
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREG---RIVEAVALLDRMMEDGLQPTQITYGTI 225
>gi|361067157|gb|AEW07890.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
Length = 133
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 80/130 (61%)
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N+VI+ K AM +L+ M R +KPD+Y Y +MS YA G+ME+ACE+ ++ +
Sbjct: 1 YNAVITGLCKGEKPDEAMTLLEEMPGRHIKPDIYAYNVIMSSYAKAGKMEKACEVFSKTE 60
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
++ + ++Y LI G+C+ + A +E+K G PN D Y+KLI++ C++ DW
Sbjct: 61 NDNIKSHFISYQILIDGFCRQGSLEKAHHYFSELKKSGRWPNKDSYSKLIRACCIEGFDW 120
Query: 496 RTAEKLLEDM 505
TA+ LL++M
Sbjct: 121 HTAQTLLDEM 130
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 3/133 (2%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+++VI LC+ + A TLL +M P +N ++S+Y+KAG M A E+
Sbjct: 1 YNAVITGLCKGEKPDEAMTLLEEMPGRHIKPDIYAYNVIMSSYAKAGKMEKACEVFSKTE 60
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+ +K +Y L+ G+ G +E+A +E KK+ + +Y LIR C +E FD
Sbjct: 61 NDNIKSHFISYQILIDGFCRQGSLEKAHHYFSELKKSGRWPNKDSYSKLIRACC-IEGFD 119
Query: 461 --CALKLLNEMKD 471
A LL+EM++
Sbjct: 120 WHTAQTLLDEMEE 132
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 154/347 (44%), Gaps = 8/347 (2%)
Query: 164 LLKAICSSVG-KKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L+A C G + V L D+ L V N ++ G A +
Sbjct: 163 ILEAACRGGGFRSAVRVLEDL-----HARGCALDVGNCNLVLNAICDQGSVDKALHLLRD 217
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+GC + +Y ++ L K + + E+M+ P+ +IS+ C+ G
Sbjct: 218 LPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGL 277
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+ H V E P + A +I +C+E +K+A ++L+ K + ++
Sbjct: 278 FERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGH-LKVAHEILNRMPSYGLKPNVVCYN 336
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
++++ LC + + LL++M + P + FN ++ + + G + +E+L+ M
Sbjct: 337 TLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVH 396
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G PDV TYT +++G+ G ++EA +L + + ++Y +++G C E + A
Sbjct: 397 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDA 456
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
L+++M G N +N LI LC K L + E LL+ M + G
Sbjct: 457 EDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIE-LLKQMLVNG 502
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 125/286 (43%), Gaps = 2/286 (0%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
N TY+ + AL R A +V ++M G P I+ C+GG + A V
Sbjct: 121 NAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVL 180
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
+ +++++C + +V AL +L D + + +++V++ LC
Sbjct: 181 EDLHARGCALDVGNCNLVLNAICDQG-SVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCM 239
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
K + L+ +M+ PP FN++IS + G E+L M G PD+
Sbjct: 240 AKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRM 299
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
Y ++ G G ++ A EILN + + V Y+TL++G C E ++ +LL EM
Sbjct: 300 YATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMF 359
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
D + +N L+ C L R E LLE M + G + IT
Sbjct: 360 DKDCPLDDVTFNILVDFFCQNGLVDRVIE-LLEQMLVHGCMPDVIT 404
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 130/292 (44%), Gaps = 2/292 (0%)
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
E+ + D C + T+ ++ + + D + E+M+ G +PD +I+ F
Sbjct: 353 ELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGF 412
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
CK G EA ++ P ++ LC + V A D++ +
Sbjct: 413 CKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVD-AEDLMSQMIQQGCPLN 471
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
F+++I LC+ V A LL +M+ G P +++VI KAG A+E+L
Sbjct: 472 PITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLN 531
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
+M ++G+ P+ Y+ + S + G++ + ++ + + R V Y+ +I CK
Sbjct: 532 VMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRG 591
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
E + A++ L M G PN Y LI+ L + + A+++L ++ KG
Sbjct: 592 ETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGF-VKEAQEMLTELCSKG 642
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 142/362 (39%), Gaps = 44/362 (12%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ A V ++ GC Y+ +EA R F A V E + G D
Sbjct: 136 GRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNC 195
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDD 328
+++ C G +A ++ L VV++ ++ LC +++++
Sbjct: 196 NLVLNAICDQGSVDKA--LHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRW-GCVQELMEE 252
Query: 329 FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD 388
A I F+++I LCR +L++M G P ++ ++I K G
Sbjct: 253 MVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGH 312
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV---- 444
+ A E+L M S GLKP+V Y L+ G + + EE E+L E L V
Sbjct: 313 LKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNI 372
Query: 445 -------------------------------TYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
TY T+I G+CK D A+ LL M G
Sbjct: 373 LVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACG 432
Query: 474 VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAV--KELEEDA 530
+PN Y +++ LC A W AE L+ M +G LN IT LI + K L E A
Sbjct: 433 CKPNTISYTIVLKGLC-SAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQA 491
Query: 531 IE 532
IE
Sbjct: 492 IE 493
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 131/308 (42%), Gaps = 7/308 (2%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+ + +I K G K A E+ N+ YG N Y ++ L + ++ +
Sbjct: 297 IRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLA 356
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE- 315
+M + D ++ +FC+ G + P +I+ C+E
Sbjct: 357 EMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEG 416
Query: 316 --DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
DE V L L + K ++ V++ LC + A+ L+S+MI +G P
Sbjct: 417 LIDEAVML----LKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNP 472
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
FN++I+ K G + A+E+LK M G PD+ +Y+ ++ G G+ +EA E+LN
Sbjct: 473 ITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNV 532
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
+ + Y ++ + + +++ + ++D ++ + YN +I SLC +
Sbjct: 533 MVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGE 592
Query: 494 DWRTAEKL 501
R E L
Sbjct: 593 TERAIEFL 600
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 6/166 (3%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA-VFNSVISAYSKAGDMTPAMEMLKLM 399
+++++ CR + A+ L + + P P NA + V+ A G + A+ +L M
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAV----PVPPNAYTYFPVVRALCARGRIADALAVLDEM 148
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
RG P Y ++ GG A +L + L + ++ C
Sbjct: 149 PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSV 208
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
D AL LL ++ G +P+V YN +++ LC+ A W ++L+E+M
Sbjct: 209 DKALHLLRDLPSFGCEPDVVSYNAVLKGLCM-AKRWGCVQELMEEM 253
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 172/392 (43%), Gaps = 14/392 (3%)
Query: 156 VTSGVVDALLKAICSSVGKKEVYALWDIVK-EIGEKEKGV-LTVEILNELIALFSKLGKG 213
VT G+ L+ +C + E ++D ++ + G GV V + N LI K+GK
Sbjct: 317 VTFGI---LVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKE 373
Query: 214 KAAFEVFN--KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVG 271
+ + K G+ N TY I+ + FD A + +M E G P+ +
Sbjct: 374 EDGLSLLEEMKMGNIN-RPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLN 432
Query: 272 KIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSG 331
++ CK G+ A + + K + + LIS+ C + + A+ ++
Sbjct: 433 TLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVN-NINRAMQCFEEMLS 491
Query: 332 EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
+ S+I LC ++ A ++SK+ G + +N +IS + K +
Sbjct: 492 SGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLER 551
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
E+L M G+KPD TY L+S G A +++ + K R S VTY +I
Sbjct: 552 VYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIH 611
Query: 452 GYCKLEEFDCALKLLNEMKDVG-VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
YC + D +K+ EM V PN YN LI +LC + D A L+EDM++K +
Sbjct: 612 AYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALC-RNNDVDRAISLMEDMKVKRV 670
Query: 511 HLNGIT-RALIRAV--KELEEDAIENGEALVE 539
N T A+++ V K++ A E + +VE
Sbjct: 671 RPNTTTYNAILKGVRDKKMLHKAFELMDRMVE 702
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 120/270 (44%), Gaps = 9/270 (3%)
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
AW V ++ G D+ +++W +G K + + ++K+ P L++
Sbjct: 265 AWEVLHCVMRLGGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVN 324
Query: 311 SLCQEDETVKLALDMLDDFSGEARK--YAIKP----FSSVIRSLCRMKDVHGAKTLLSKM 364
LC+ + AL + D G+ ++P F+++I LC++ +LL +M
Sbjct: 325 HLCKA-RRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEM 383
Query: 365 -ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
+ P +N +I + KAG+ A E+ + M G++P+V T L+ G G+
Sbjct: 384 KMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGR 443
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
+ A E NE K + + TY LI +C + + A++ EM G P+ Y
Sbjct: 444 VHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYS 503
Query: 484 LIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
LI LC+ A A ++ ++L G L+
Sbjct: 504 LISGLCI-AGRMNDASVVVSKLKLAGFSLD 532
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 122/295 (41%), Gaps = 36/295 (12%)
Query: 191 EKGVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
E+GV V LN L+ K G+ A E FN+ G N TY I A +
Sbjct: 421 EEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNIN 480
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A E+M+ +G PD+ +IS C G+ +A VV + + +S LI
Sbjct: 481 RAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLI 540
Query: 310 SSLCQ--------------EDETVK---LALDMLDDFSGEARKYA-------------IK 339
S C+ E+ VK + + L + G+ +A ++
Sbjct: 541 SGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLR 600
Query: 340 P----FSSVIRSLCRMKDVHGAKTLLSKMISEGP-PPGNAVFNSVISAYSKAGDMTPAME 394
P + ++I + C K+V + +M S PP ++N +I A + D+ A+
Sbjct: 601 PSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAIS 660
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
+++ M+ + ++P+ TY ++ G + + +A E+++ + R +T L
Sbjct: 661 LMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVL 715
>gi|19071826|dbj|BAB85657.1| PnC401 homologue [Arabidopsis thaliana]
Length = 831
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 166/371 (44%), Gaps = 23/371 (6%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
+ +A++ A S + +++ +KE G K T N LI + K+GK + + +
Sbjct: 391 LFNAIINASSESGNLDQAMKIFEKMKESGCKP----TASTFNTLIKGYGKIGKLEESSRL 446
Query: 220 FNK-FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+ D N T ++A ++ + AW++ KM G PD + +
Sbjct: 447 LDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYA 506
Query: 279 KGGKAKEAH-VVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEAR 334
+ G A ++ K+ P +++ C+E +E ++ M +
Sbjct: 507 RIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM--------K 558
Query: 335 KYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
+ + P F+S+I+ + D+ G ++ M G P F+++++A+S GDM
Sbjct: 559 ELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMK 618
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
E+ M G+ PD++ ++ L GYA G+ E+A +ILN+ +K R + V Y +I
Sbjct: 619 RCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAKQILNQMRKFGVRPNVVIYTQII 678
Query: 451 RGYCKLEEFDCALKLLNEMKD-VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
G+C E A+++ +M VG+ PN+ Y LI W+ AE+LL+DM K
Sbjct: 679 SGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWK-AEELLKDMEGKN 737
Query: 510 LHLNGITRALI 520
+ T LI
Sbjct: 738 VVPTRKTMQLI 748
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 152/318 (47%), Gaps = 12/318 (3%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+++N LI + G+ + A +FN + G + TY + AL+R+K F S+
Sbjct: 323 TKLMNGLI----ERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLIS 378
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI---SSLC 313
K+ + G PD+ II+ + G +A ++ +E P S LI +
Sbjct: 379 KVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIG 438
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
+ +E+ +L ML D E + + + ++++ C + + A ++ KM S G P
Sbjct: 439 KLEESSRLLDMMLRD---EMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDV 495
Query: 374 AVFNSVISAYSKAGDMTPAMEM-LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
FN++ AY++ G A +M + M +KP+V T +++GY G+MEEA
Sbjct: 496 VTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFY 555
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
K+ + +++LI+G+ + + D ++++ M++ GV+P+V ++ L+ +
Sbjct: 556 RMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWS-SV 614
Query: 493 LDWRTAEKLLEDMRLKGL 510
D + E++ DM G+
Sbjct: 615 GDMKRCEEIYTDMLEGGI 632
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
DV + T LM+G G+ +EA I N + + S +TY TL+ + + F L L+
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
++++ G++P+ +N +I + ++ + A K+ E M+ G
Sbjct: 378 SKVEKNGLKPDTILFNAIINA-SSESGNLDQAMKIFEKMKESG 419
>gi|359496995|ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Vitis vinifera]
Length = 622
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 177/397 (44%), Gaps = 8/397 (2%)
Query: 97 YEIDGDKLENVLSLLQSSVDGYLESSLDSFELDLHEDFVLKVLETPLVLGENLVCFFKWV 156
+ D +K+ +L S V LE +L + + +VL G FF W
Sbjct: 54 FSADVEKVYRILRKFHSRVPK-LELALQESGVAVRSGLTERVLNRCGDAGNLGYRFFVWA 112
Query: 157 TS--GVVDA--LLKAICSSVGK-KEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLG 211
+ G + + KA+ +GK ++ A+W +++E+ + ++ + L+ F+
Sbjct: 113 SKQPGYRHSYEVYKAMIKILGKMRQFGAVWALIEEMRRENPQFVSPYVFVVLMRRFASAR 172
Query: 212 KGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVG 271
K A EV ++ YGC ++ + ++AL + A S+ E M P +
Sbjct: 173 MVKKAIEVLDEMPKYGCEPDEHVFGCLLDALCKNGSVKEAASLFEDM-RIRFTPTLKHFT 231
Query: 272 KIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSG 331
++ +C+ GK EA V RE P V L++ + V A D+L +
Sbjct: 232 SLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVD-AYDLLKEMRR 290
Query: 332 EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
+ + + F+++I++LC K + A + +M S G P + ++IS + K G ++
Sbjct: 291 KECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISK 350
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
E+L M +G P+ TY +M+ + ++EE E++ E +K Y+ +IR
Sbjct: 351 GYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIR 410
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
CKL E +++ NEM+ G+ P +D + +I
Sbjct: 411 LACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGF 447
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 133/316 (42%), Gaps = 12/316 (3%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+ + N L+ ++ GK A+++ + C N ++ I+AL +K + A V
Sbjct: 262 IVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFF 321
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M G D+ +IS FCK GK + + + ++ + P + I + ++
Sbjct: 322 EMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQG-HIPNPMTYLHIMAAHEKK 380
Query: 317 ETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
E ++ +++++ E RK P ++ VIR C++ ++ + ++M + G PG
Sbjct: 381 EELEECIELME----EMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPG 436
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL--KPDVYTYTGLMSGYANGGQMEEACEI 430
F +I + + A E K M RGL P T L++ ++E + ++
Sbjct: 437 LDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKDV 496
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
+ L+ + I A +M D GV P D + KL++ L
Sbjct: 497 WSCIMTKGCDLNVYAWTIWIHALFSNGHVKEACSYCLDMMDAGVMPQPDTFAKLMRGL-R 555
Query: 491 KALDWRTAEKLLEDMR 506
K + + A ++ E +R
Sbjct: 556 KLYNRQIAAEITEKVR 571
>gi|255660844|gb|ACU25591.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 418
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 137/280 (48%), Gaps = 4/280 (1%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSE--KVGKIISWFCKGGKAKEAHVVYTLAREK 296
I+ + RK D A +V ++ET S+ +I+ + + G ++A + L RE
Sbjct: 36 IQIVVSRKGKDSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFIRDAIEFFRLTREH 95
Query: 297 KMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHG 356
K + P ++ L + + KL + ++ F+ ++ C+ ++
Sbjct: 96 KFWVPFDTCRKVLEHL-MKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRL 154
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A+++ + G P FN+++S Y + GD+ + M + G++PDVYTY+ L++
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLIN 214
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
G +M+EA E+ NE N + VT+ TLI G+CK D A+++ ++ G P
Sbjct: 215 GLCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQLLSQGFSP 274
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++ YN LI LC K D + A L+++M +K L + IT
Sbjct: 275 DLITYNTLIFGLCKKG-DLKQARDLIDEMSMKELKPDKIT 313
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 165/391 (42%), Gaps = 57/391 (14%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L++ + S GK A++ + E ++ + + + LI + + G + A E F
Sbjct: 34 SLIQIVVSRKGKDSASAVFAAILETKGTQRS--DIYVFSGLITAYLESGFIRDAIEFFRL 91
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
++ +T +E L + K F W ++++E G ++ FCK G+
Sbjct: 92 TREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGE 151
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAF----------------------------------- 307
+ A V+ + + P SVV+F
Sbjct: 152 MRLAQSVFDAITKWGLRP--SVVSFNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTY 209
Query: 308 --LISSLCQE---DETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAK 358
LI+ LC+E DE +L +MLD+ + P F+++I C+ V A
Sbjct: 210 SVLINGLCKESKMDEANELFNEMLDN--------GLVPNGVTFTTLIDGHCKNGRVDLAM 261
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+ +++S+G P +N++I K GD+ A +++ M + LKPD TYT L+ G
Sbjct: 262 EIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDKITYTTLIDGS 321
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G +E A E K + RL V Y LI G C+ A K+L M VG++P+
Sbjct: 322 CKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRGMLSVGLKPDN 381
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
Y +I C K D +T KLL++M G
Sbjct: 382 GTYTMIINEFCKKG-DVKTGSKLLKEMXRDG 411
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 124/299 (41%), Gaps = 2/299 (0%)
Query: 180 LWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI 239
+W KEI E ++ N L+ F K G+ + A VF+ +G + ++ +
Sbjct: 120 VWGFYKEILECGYPA-SLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLM 178
Query: 240 EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
R D + + M +G PD +I+ CK K EA+ ++ + +
Sbjct: 179 SGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLV 238
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P LI C+ V LA+++ + + ++++I LC+ D+ A+
Sbjct: 239 PNGVTFTTLIDGHCKNGR-VDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARD 297
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
L+ +M + P + ++I K GD+ A E K M ++ D YT L+SG
Sbjct: 298 LIDEMSMKELKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLC 357
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G+ +A ++L + TY +I +CK + KLL EM G P V
Sbjct: 358 QEGRSVDAEKMLRGMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMXRDGHVPCV 416
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 1/208 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K K A E+FN+ D G V N T+ I+ + D A + ++++ G
Sbjct: 212 LINGLCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQLLSQG 271
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD +I CK G K+A + K++ P + LI C+E + ++ A
Sbjct: 272 FSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDKITYTTLIDGSCKEGD-LETA 330
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+ E + ++++I LC+ A+ +L M+S G P N + +I+
Sbjct: 331 FEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRGMLSVGLKPDNGTYTMIINE 390
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ K GD+ ++LK M G P V T
Sbjct: 391 FCKKGDVKTGSKLLKEMXRDGHVPCVVT 418
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 144/332 (43%), Gaps = 18/332 (5%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
L+ A+C G ++ ++ +K G + + +I K G AF +F +
Sbjct: 165 LIDAVCKCGGVEKALKVFLDMKSRGCRPN----IFTYTSMIDGLGKSGHVDKAFFLFEEM 220
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
G VA + Y I L R D A + +M+ G PD ++ G+A
Sbjct: 221 TSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRA 280
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP--- 340
EA ++ AR+ ++ LI +LC+ LD + GE + + P
Sbjct: 281 SEARRIFQEARDVGCALDVNLYNVLIDTLCKSKR-----LDEAWEIFGELEEDGLVPDVY 335
Query: 341 -FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
F++++ LC+ +H A LL M G P V+N++I K+G + A ++L M
Sbjct: 336 TFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEM 395
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
+S G +PDV TY L+ GG++E+A + E + VTY+T++ G C
Sbjct: 396 QSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAK-GFANTVTYNTILNGLCMAGRV 454
Query: 460 DCALKLLNEMK----DVGVQPNVDEYNKLIQS 487
D A KL N MK D + P+ Y L+
Sbjct: 455 DEAYKLFNGMKQETVDGVIDPDFVTYTTLLNG 486
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 160/362 (44%), Gaps = 6/362 (1%)
Query: 152 FFKWVTS--GVVDAL--LKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALF 207
FFKWV + G V ++ + +G + + V EK + +L I EL +
Sbjct: 5 FFKWVRTQRGGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIELARGY 64
Query: 208 SKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDS 267
+ G + + E + + C Y I+A + A +V M ++G PD+
Sbjct: 65 ASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDT 124
Query: 268 EKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLD 327
+++ F K + ++ + + P + LI ++C+ V+ AL +
Sbjct: 125 YTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCG-GVEKALKVFL 183
Query: 328 DFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG 387
D + I ++S+I L + V A L +M SEG V+NS+I ++G
Sbjct: 184 DMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSG 243
Query: 388 DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYH 447
A ++ + M S+GL+PD T+T L+ G G+ EA I EA+ L Y+
Sbjct: 244 RADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYN 303
Query: 448 TLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRL 507
LI CK + D A ++ E+++ G+ P+V +N L+ LC K+ A LL DM+
Sbjct: 304 VLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLC-KSGRIHDAFILLGDMKR 362
Query: 508 KG 509
G
Sbjct: 363 AG 364
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 142/357 (39%), Gaps = 37/357 (10%)
Query: 189 EKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
E + LT N LI F K G + A V+ G G + T+ + A + K
Sbjct: 81 EGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRV 140
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
D W + E+M P+ +I CK G ++A V+ + + P +
Sbjct: 141 DSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSM 200
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
I L + K A + ++ + E ++S+I L R A L +M+S+G
Sbjct: 201 IDGLGKSGHVDK-AFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKG 259
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLK--------------------LMRSR------ 402
P + F S++ AG + A + + L +S+
Sbjct: 260 LQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAW 319
Query: 403 ---------GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
GL PDVYT+ LM G G++ +A +L + K+ Y+TLI G
Sbjct: 320 EIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGL 379
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
K + A +LL EM+ +G +P+V YN LI C K A +L E++ KG
Sbjct: 380 RKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESC-KGGRIEDALRLFEEISAKGF 435
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 96/221 (43%), Gaps = 6/221 (2%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ A +F + D GC + Y I+ L + K D AW + ++ E G +PD
Sbjct: 278 GRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTF 337
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
++ CK G+ +A ++ + P +V LI L ++ V+ A +L +
Sbjct: 338 NALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGL-RKSGRVEEAGQLLLEMQ 396
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
+ + ++++I C+ + A L ++ ++G +N++++ AG +
Sbjct: 397 SLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFA-NTVTYNTILNGLCMAGRVD 455
Query: 391 PAMEMLKLMRSRG----LKPDVYTYTGLMSGYANGGQMEEA 427
A ++ M+ + PD TYT L++G G E A
Sbjct: 456 EAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAGLSELA 496
>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
Length = 1765
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 125/262 (47%), Gaps = 9/262 (3%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
NQ +Y I R A + +M+ G PD G +I GK EA +V
Sbjct: 1321 NQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVR 1380
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIR 346
E++++P ++ LIS LC++ + A ++L+ E + ++P ++++I
Sbjct: 1381 EKMTERQVFPDVNIYNVLISGLCKK-RMLPAAKNILE----EMLEKNVQPDEFVYATLID 1435
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
R +++ A+ + M +G P N++I Y + G M+ A+ + MR G P
Sbjct: 1436 GFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIP 1495
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
D +TYT ++SGYA G + A L + K + + VTY +LI GYCK + D A L
Sbjct: 1496 DEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLF 1555
Query: 467 NEMKDVGVQPNVDEYNKLIQSL 488
M+ + PNV Y LI SL
Sbjct: 1556 ANMQAEALSPNVVTYTILIGSL 1577
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 10/234 (4%)
Query: 308 LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
LI C+ + + L +L + + + + S+I L + D+ +L +M
Sbjct: 1188 LIDGYCRRGDMGR-GLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKR 1246
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P ++NSVI A K T AM +LK M + G PD+ T+ L++G + G + +A
Sbjct: 1247 GFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKA 1306
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
L EA + + ++Y LI G+C E A LL EM G P+V + LI
Sbjct: 1307 EHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHG 1366
Query: 488 LCL-----KALDWR---TAEKLLEDMRLKGLHLNGITRA-LIRAVKELEEDAIE 532
L + +AL R T ++ D+ + + ++G+ + ++ A K + E+ +E
Sbjct: 1367 LVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLE 1420
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 121/326 (37%), Gaps = 27/326 (8%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
GK A V K + + Y I L ++++ A ++ E+M+E PD
Sbjct: 1371 GKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVY 1430
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
+I F + +A ++ K + P +I CQ + L M
Sbjct: 1431 ATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCM----- 1485
Query: 331 GEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
RK P +++VI + +++GA L MI P ++S+I+ Y K
Sbjct: 1486 SNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKT 1545
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
GD A + M++ L P+V TYT L+ ++ A NH + VT
Sbjct: 1546 GDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTL 1605
Query: 447 HTLIRGY------------CKLEEFDCALKLLNEMK----DVGVQPNVDEYNKLIQSLCL 490
H L+ G C E LL K D+G P YN +I SLC
Sbjct: 1606 HYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIG-DPRNSAYNAIIFSLCR 1664
Query: 491 KALDWRTAEKLLEDMRLKGLHLNGIT 516
+ R A M KG N IT
Sbjct: 1665 HNM-LREALDFKNRMAKKGYVPNPIT 1689
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/270 (19%), Positives = 103/270 (38%), Gaps = 49/270 (18%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I + + G A + GC+ ++ TY I +++ + A MI+
Sbjct: 1466 NAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIK 1525
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
P+ +I+ +CK G A ++ + + + P LI SL ++D+ ++
Sbjct: 1526 RKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLR 1585
Query: 321 LAL---DMLDDFSGE---ARKYAIKPFSS----VIRSLC-RMKDVHGAKTLL---SKMIS 366
L ML + Y + +S VI S+C +VHG LL K++
Sbjct: 1586 AGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVF 1645
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
+ P N+ +N++I + + + A++ M +G P+
Sbjct: 1646 DIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPN------------------- 1686
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
P+T+ +L+ G+C +
Sbjct: 1687 ----------------PITFLSLLYGFCSV 1700
>gi|302798519|ref|XP_002981019.1| hypothetical protein SELMODRAFT_114007 [Selaginella moellendorffii]
gi|300151073|gb|EFJ17720.1| hypothetical protein SELMODRAFT_114007 [Selaginella moellendorffii]
Length = 448
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 124/271 (45%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI++ K + A +VF+ + V N + Y + A R + D A+ + +MI+ G
Sbjct: 155 LISVLCKHNRADDAMKVFDIMVEKEIVPNVDVYTSLLAAHCRTRKLDGAYRLFVEMIQRG 214
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P + G ++ C GG++ A+ +++ R + P ++ A LI C +
Sbjct: 215 YGPSASTYGLLLRCLCNGGRSYLAYDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAK 274
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+ + GE + ++ +I LCR V A + + M+ +G P +N++I
Sbjct: 275 VLFKEVLEGEKAQLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMG 334
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ KA ++ A+++ + M +G P+ Y+ + G G++ EA E ++ +
Sbjct: 335 FFKANEVDKALQLFRAMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPD 394
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
VTY+ LIRG D A +L EM + G
Sbjct: 395 NVTYNALIRGLFGANRMDEAHRLYREMGERG 425
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 133/313 (42%), Gaps = 6/313 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
L+ F ++ + E+F + G Y ++AL FD + + + G
Sbjct: 51 LVDKFCEMKRVGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDG 110
Query: 263 SLPDSEKVGKIISWFCKGGKAKEA-HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
SLP ++ K GK +EA VV + KK P LIS LC+ +
Sbjct: 111 SLPHVLAYKTMLDCLIKTGKTREASEVVGEMI--KKSVPDGMTYTALISVLCKHNRADD- 167
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A+ + D + + ++S++ + CR + + GA L +MI G P + + ++
Sbjct: 168 AMKVFDIMVEKEIVPNVDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLR 227
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA-KKNHSR 440
G A ++ MRSRG PD TY L+ G G++ EA + E + ++
Sbjct: 228 CLCNGGRSYLAYDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKAQ 287
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
L Y+ LI G C+ + + AL++ M D G P + YN LI KA + A +
Sbjct: 288 LDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGF-FKANEVDKALQ 346
Query: 501 LLEDMRLKGLHLN 513
L M KG N
Sbjct: 347 LFRAMEEKGFSPN 359
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 108/265 (40%), Gaps = 4/265 (1%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G V ++++Y + L++ D A ++ M+ G PD G ++ FC+ + E
Sbjct: 5 GVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRVGEV 64
Query: 287 HVVYT-LAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVI 345
++ L + A L + +C D D G+ + + +++
Sbjct: 65 CELFQELESNGVAVGMLAYNAILKALMCSGD--FDGGFKFSDIAVGDGSLPHVLAYKTML 122
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
L + A ++ +MI + P G + ++IS K AM++ +M + +
Sbjct: 123 DCLIKTGKTREASEVVGEMIKKSVPDG-MTYTALISVLCKHNRADDAMKVFDIMVEKEIV 181
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
P+V YT L++ + +++ A + E + S TY L+R C A +
Sbjct: 182 PNVDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYDI 241
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCL 490
+ M+ G P+ + Y LI C+
Sbjct: 242 HSSMRSRGHVPDENTYASLIYGCCM 266
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/232 (18%), Positives = 94/232 (40%), Gaps = 2/232 (0%)
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M+E G +PD + ++ K +A + + + P L+ C E +
Sbjct: 1 MLEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFC-EMK 59
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
V ++ + + +++++++L D G + +G P +
Sbjct: 60 RVGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYK 119
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+++ K G A E++ M + + PD TYT L+S + ++A ++ + +
Sbjct: 120 TMLDCLIKTGKTREASEVVGEMIKKSV-PDGMTYTALISVLCKHNRADDAMKVFDIMVEK 178
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ Y +L+ +C+ + D A +L EM G P+ Y L++ LC
Sbjct: 179 EIVPNVDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLC 230
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 114/307 (37%), Gaps = 43/307 (14%)
Query: 137 KVLETPLVLGENLVCFFKWVTSGVV-DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVL 195
K E V+GE + K V G+ AL+ +C + ++DI+ E ++ V
Sbjct: 130 KTREASEVVGEMIK---KSVPDGMTYTALISVLCKHNRADDAMKVFDIMVE----KEIVP 182
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
V++ L+A + K A+ +F + G + TY + L A+ +
Sbjct: 183 NVDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYDIH 242
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE-KKMYPPQSVVAFLISSLCQ 314
M G +PD +I C G+ EA V++ E +K + LI LC+
Sbjct: 243 SSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKAQLDAGIYNVLIEGLCR 302
Query: 315 E---DETVKLALDMLDD----------------FSGEARKYAIKPF-------------- 341
+E +++ M+D F A++ F
Sbjct: 303 ASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRAMEEKGFSPNTMI 362
Query: 342 -SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
S+ I LC++ ++ A + + G P N +N++I A M A + + M
Sbjct: 363 YSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHRLYREMG 422
Query: 401 SRGLKPD 407
RG D
Sbjct: 423 ERGYIAD 429
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 62/142 (43%), Gaps = 1/142 (0%)
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
M+ +G P +N ++ +K + A ML M G PDV T L+ + +
Sbjct: 1 MLEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKR 60
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
+ E CE+ E + N + + Y+ +++ +FD K + G P+V Y
Sbjct: 61 VGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKT 120
Query: 484 LIQSLCLKALDWRTAEKLLEDM 505
++ L +K R A +++ +M
Sbjct: 121 MLDCL-IKTGKTREASEVVGEM 141
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 149/354 (42%), Gaps = 42/354 (11%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKE--KGVLTVEILNELIALFSKLGKGKAAFEVFN 221
LLK +C+ +E L ++ + + V++ I+ I F G+ + +F
Sbjct: 167 LLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIV---INGFFTEGQVDKPYNLFL 223
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ D G + TY I+ L + ++FD A V ++MI+ G P++ +I + G
Sbjct: 224 EMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIG 283
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
K KE + ML++ S K +
Sbjct: 284 KWKEV------------------------------------VQMLEEMSARGLKPDCYTY 307
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
S++ LC+ A+ MI +G P + + +I Y+ G ++ L LM
Sbjct: 308 GSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVE 367
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
GL PD + + S YA G +++A +I N+ +++ + V Y LI CKL D
Sbjct: 368 NGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDD 427
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
A N+M + GV PN+ +N L+ LC W AE+L+ +M +G+ N +
Sbjct: 428 AEVKFNQMINEGVTPNIVVFNSLVYGLC-TVDKWERAEELVYEMLDQGICPNAV 480
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 154/365 (42%), Gaps = 20/365 (5%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+LL +C + +E +D + G K K V LI ++ G +
Sbjct: 309 SLLNYLCKNGRCREARFFFDSMIRKGIKPK----VSTYGILIHGYATKGALSEMHSFLDL 364
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ G + + A ++ + D A + KM + G P+ G +I CK G+
Sbjct: 365 MVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGR 424
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE---TVKLALDMLDDFSGEARKYAIK 339
+A V + + + P V L+ LC D+ +L +MLD I
Sbjct: 425 VDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQ--------GIC 476
Query: 340 P----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
P F+++I +LC + V + L+ M G P + +IS Y G A ++
Sbjct: 477 PNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKV 536
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
M S GL P TY L+ GY + ++++A + E + VTY+T++ G +
Sbjct: 537 FDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQ 596
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
+ F A +L M + G + ++ YN ++ LC K+ A K+ + + KGL LN I
Sbjct: 597 TKRFSEAKELYLNMINSGTKCDIYTYNIILNGLC-KSNCVDEAFKMFQSLCSKGLQLNII 655
Query: 516 TRALI 520
T ++
Sbjct: 656 TFTIM 660
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 152/367 (41%), Gaps = 11/367 (2%)
Query: 176 EVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETY 235
E+++ D++ E G I N + ++K G A ++FNK +G N Y
Sbjct: 357 EMHSFLDLMVENGLSPDH----HIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNY 412
Query: 236 YFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE 295
I+AL + D A +MI G P+ ++ C K + A + +
Sbjct: 413 GALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLD 472
Query: 296 KKMYPPQSVVAFLISSLCQEDETV--KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
+ + P LI +LC + + +D+++ ++ P +I C
Sbjct: 473 QGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTP---LISGYCLTGR 529
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
A+ + M+S G P +N+++ Y A + A + + M +G+ P V TY
Sbjct: 530 TDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNT 589
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
++ G + EA E+ + ++ TY+ ++ G CK D A K+ + G
Sbjct: 590 ILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKG 649
Query: 474 VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIEN 533
+Q N+ + +I +L LK A L + GL N +T L+ A +EE ++E
Sbjct: 650 LQLNIITFTIMIGAL-LKGGRKEDAMDLFAAIPANGLVPNVVTYRLV-AENLIEEGSLEE 707
Query: 534 GEALVEA 540
++L A
Sbjct: 708 FDSLFSA 714
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 122/299 (40%), Gaps = 13/299 (4%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
+ + N L+ + K + A E+ + D G N + I L +
Sbjct: 443 NIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLI 502
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+ M G PD+ +IS +C G+ EA V+ + P + L+ C
Sbjct: 503 DLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSA 562
Query: 316 ---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
D+ L +ML + + +++++ L + K AK L MI+ G
Sbjct: 563 SRIDDAYCLFREMLR----KGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCD 618
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+N +++ K+ + A +M + + S+GL+ ++ T+T ++ GG+ E+A ++
Sbjct: 619 IYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFA 678
Query: 433 EAKKNHSRLSPVTYHTLIRGYCK---LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
N + VTY + + LEEFD L + M+ G PN N L++ L
Sbjct: 679 AIPANGLVPNVVTYRLVAENLIEEGSLEEFD---SLFSAMEKNGTAPNSQMLNALVRRL 734
>gi|147832566|emb|CAN63846.1| hypothetical protein VITISV_010038 [Vitis vinifera]
Length = 457
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 149/310 (48%), Gaps = 2/310 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L++ +S+ AA+ V ++ + G + TY I A ++R + + + E+M+
Sbjct: 46 NTLLSAYSRFVGIDAAYSVIHRMKEAGISPDVITYNSLIAAATKRCLLSRSLDLFEEMLR 105
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
TG PD ++ F K GK EA+ V+ + P S +I+ LC T
Sbjct: 106 TGIRPDVWSYNSLMHCFFKLGKPDEANRVFQDIILTNLLPSSSTFNIMINGLCNNGYT-G 164
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
AL + + + ++ +I LC+ + ++ A+ +L ++ G P + +V+
Sbjct: 165 YALSLYRYLQRQGFVPELVTYNILINGLCKSRKLNAARRILRELGESGNVPDAITYTTVM 224
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
++ E+ M+S+G D ++Y +++ G++EEA +I+ + ++
Sbjct: 225 KCCFRSRQFEQGFEIFSEMKSKGYAFDAFSYCAVIAALTKTGRLEEANDIMEQMARSDID 284
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
L V+Y+T++ YC+ + + KLL+E+++ G++ + + LI LC KA + A +
Sbjct: 285 LDIVSYNTVMNLYCRNGKLEATYKLLDEIEEHGLECDEYTHTILIDGLC-KAGNVEGALR 343
Query: 501 LLEDMRLKGL 510
L++M G
Sbjct: 344 HLKNMTKMGF 353
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 84/168 (50%), Gaps = 1/168 (0%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+ +++++ + R + A +++ +M G P +NS+I+A +K ++ ++++ +
Sbjct: 42 VVTYNTLLSAYSRFVGIDAAYSVIHRMKEAGISPDVITYNSLIAAATKRCLLSRSLDLFE 101
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M G++PDV++Y LM + G+ +EA + + + S T++ +I G C
Sbjct: 102 EMLRTGIRPDVWSYNSLMHCFFKLGKPDEANRVFQDIILTNLLPSSSTFNIMINGLCNNG 161
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
AL L ++ G P + YN LI LC K+ A ++L ++
Sbjct: 162 YTGYALSLYRYLQRQGFVPELVTYNILINGLC-KSRKLNAARRILREL 208
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 77/155 (49%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
+++ K + I SLC++ + A+ ++ I G P +N+++SAYS+ + A
Sbjct: 4 RFSTKLLNICIASLCKVGQLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGIDAAYS 63
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
++ M+ G+ PDV TY L++ + + ++ E + R +Y++L+ +
Sbjct: 64 VIHRMKEAGISPDVITYNSLIAAATKRCLLSRSLDLFEEMLRTGIRPDVWSYNSLMHCFF 123
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
KL + D A ++ ++ + P+ +N +I LC
Sbjct: 124 KLGKPDEANRVFQDIILTNLLPSSSTFNIMINGLC 158
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/304 (19%), Positives = 111/304 (36%), Gaps = 46/304 (15%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+ F KLGK A VF + + T+ I L +A S+ +
Sbjct: 116 NSLMHCFFKLGKPDEANRVFQDIILTNLLPSSSTFNIMINGLCNNGYTGYALSLYRYLQR 175
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAH-VVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
G +P+ +I+ CK K A ++ L + P ++ + C
Sbjct: 176 QGFVPELVTYNILINGLCKSRKLNAARRILRELGESGNV--PDAITYTTVMKCCFRSRQF 233
Query: 320 KLALDMLDDFSGEARKYAIKPFS--SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
+ ++ + +++ YA FS +VI +L + + A ++ +M +N
Sbjct: 234 EQGFEIFSEM--KSKGYAFDAFSYCAVIAALTKTGRLEEANDIMEQMARSDIDLDIVSYN 291
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG--------------- 422
+V++ Y + G + ++L + GL+ D YT+T L+ G G
Sbjct: 292 TVMNLYCRNGKLEATYKLLDEIEEHGLECDEYTHTILIDGLCKAGNVEGALRHLKNMTKM 351
Query: 423 --------------------QMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
Q++ A ++ + S TY +++ CK + A
Sbjct: 352 GFDSTLVAQNCVIDGLCKVGQLDHAIKMFASMEVKDS----FTYSSMVHNLCKARRYRHA 407
Query: 463 LKLL 466
+LL
Sbjct: 408 SRLL 411
>gi|255660846|gb|ACU25592.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 418
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 165/388 (42%), Gaps = 51/388 (13%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L++ + S GK A++ + E ++ + + + LI + + G + A E F
Sbjct: 34 SLIQIVVSRKGKDSASAVFAAILETKGTQRS--DIYVFSGLINAYLESGFVRDAIECFRL 91
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
++ +T +E L + K F W ++++E G ++ FCK G+
Sbjct: 92 TREHKLRVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGE 151
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAF----------------------------------- 307
A V+ + + P SVV+F
Sbjct: 152 IWIAQSVFDSITKWGLRP--SVVSFNTLMNGYIRLGDLDQGFKLKNAMHASGVQPDVYTY 209
Query: 308 --LISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLL 361
LI+ LC+E + ++ +D E + P F+++I C+ V A
Sbjct: 210 SVLINGLCKESK-----MNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETY 264
Query: 362 SKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG 421
+M+S+ P +N++I K GD+ A ++L MR +GLKPD TYT L+ G
Sbjct: 265 KQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDGNCKE 324
Query: 422 GQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEY 481
G ++ A E+ K RL V Y LI G C+ A K+L EM VG++P+ Y
Sbjct: 325 GDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLSVGLKPDNGTY 384
Query: 482 NKLIQSLCLKALDWRTAEKLLEDMRLKG 509
+I C K D +TA KLL++M+ +G
Sbjct: 385 TMIINEFCKKE-DVKTAAKLLKEMQRQG 411
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 138/280 (49%), Gaps = 4/280 (1%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSE--KVGKIISWFCKGGKAKEAHVVYTLAREK 296
I+ + RK D A +V ++ET S+ +I+ + + G ++A + L RE
Sbjct: 36 IQIVVSRKGKDSASAVFAAILETKGTQRSDIYVFSGLINAYLESGFVRDAIECFRLTREH 95
Query: 297 KMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHG 356
K+ P ++ L + + KL + ++ F+ ++ C+ ++
Sbjct: 96 KLRVPFDTCRKVLEHL-MKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIWI 154
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A+++ + G P FN++++ Y + GD+ ++ M + G++PDVYTY+ L++
Sbjct: 155 AQSVFDSITKWGLRPSVVSFNTLMNGYIRLGDLDQGFKLKNAMHASGVQPDVYTYSVLIN 214
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
G +M EA ++ NE + VT+ TLI G+CK + D A++ +M P
Sbjct: 215 GLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFLP 274
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++ YN LI LC K D + A+ LL++MR+KGL + IT
Sbjct: 275 DLITYNTLIYGLCKKG-DLKQAQDLLDEMRMKGLKPDKIT 313
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 1/208 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K K A ++FN+ D G V N T+ I+ + D A ++M+
Sbjct: 212 LINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQC 271
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
LPD +I CK G K+A + R K + P + LI C+E + + A
Sbjct: 272 FLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDGNCKEGD-LDSA 330
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++ + E+ + ++++I LC+ A+ +L +M+S G P N + +I+
Sbjct: 331 FELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLSVGLKPDNGTYTMIINE 390
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ K D+ A ++LK M+ +G P V T
Sbjct: 391 FCKKEDVKTAAKLLKEMQRQGHVPCVVT 418
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 168/376 (44%), Gaps = 10/376 (2%)
Query: 120 ESSLDSFELDLHEDFVLKVLETPLVLGENLVCFFKWVT-----SGVVDALLKAICSSVGK 174
++ L+S DL+ D V+KVL +N + FF+W DA I +G+
Sbjct: 171 DNFLNSMAQDLNPDAVVKVLNLQ-TDAQNALRFFQWADKQEGYDHNTDAYFTMI-DILGR 228
Query: 175 KEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVAN--Q 232
+++ + + + + +T +L+ + + + G+ K + E FN + G
Sbjct: 229 AKMFTELQSLLQKMQTQGREITRSMLHSFVMSYGRSGRFKESLEAFNLMKEMGYEPGLID 288
Query: 233 ETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTL 292
Y + +L + K D A ++ +MI G ++ +I F K ++A +
Sbjct: 289 TAYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDD 348
Query: 293 AREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMK 352
+ P +IS+LC+ + ++ A +L + I ++++I+ LC ++
Sbjct: 349 MIQNNYAPDVVTYTIVISALCKR-KMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVR 407
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT 412
A L++ M G PP + + K + A EM +RGLKP+ TY
Sbjct: 408 RPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYN 467
Query: 413 GLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
L++GY G ++ EA +IL E +N VTY TLI+G + + AL++ +EM++
Sbjct: 468 TLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENK 527
Query: 473 GVQPNVDEYNKLIQSL 488
G N D N L + L
Sbjct: 528 GYDVNFDTLNILARGL 543
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 138/346 (39%), Gaps = 47/346 (13%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
TY I AL +RK+ + A+ V +KM E G P+ +I C + +EA + TL
Sbjct: 360 TYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLM 419
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLC 349
+ + P L LC+ LD + EA +KP +++++ C
Sbjct: 420 EQGGVPPNIYTYTILTHGLCKLRR-----LDRAKEMFNEALARGLKPNRVTYNTLLNGYC 474
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
R + A +L +M P + + ++I + + A+ M M ++G +
Sbjct: 475 RGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFD 534
Query: 410 TYTGLMSGYA-----------------------------------NGGQMEEACEILNEA 434
T L G A G+MEEA +L E
Sbjct: 535 TLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEM 594
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
+ TY+T+I+G+C+ D A +LN M + G+ P+ YN LI+ +
Sbjct: 595 INKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEFHNQG-R 653
Query: 495 WRTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIENGEALVEA 540
+ A++L +G+ LN + +I+ EL E + + E LV
Sbjct: 654 TQDADQLYATALERGVVLN--PKPVIQEPDELPEGLVRSQEELVRG 697
>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g07290, mitochondrial; Flags: Precursor
gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 880
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 168/398 (42%), Gaps = 42/398 (10%)
Query: 156 VTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKA 215
V V+ AL+K CS +KE+ L E+ E L + L+ +KL G
Sbjct: 121 VAHAVIVALIKE-CSRC-EKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFL 178
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A+ + + G V Y + AL + + A K+++ G + DS ++
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLL 238
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSV-VAFLISSLCQ----------EDET------ 318
FC+G ++A V+ + ++ P SV + LI LC+ +D+
Sbjct: 239 GFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQ 298
Query: 319 ------------------VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTL 360
+ A ++ D+ K + ++ +I LCR + A +
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGV 358
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
KM+ + P +N++I+ Y K G + PA E+L +M R KP+V T+ LM G
Sbjct: 359 CRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418
Query: 421 GGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G+ +A +L N LSP V+Y+ LI G C+ + A KLL+ M ++P+
Sbjct: 419 VGKPYKAVHLLKRMLDNG--LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDC 476
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ +I + C K A L M KG+ L+ +T
Sbjct: 477 LTFTAIINAFC-KQGKADVASAFLGLMLRKGISLDEVT 513
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 144/316 (45%), Gaps = 8/316 (2%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V NEL+ ++GK A + + D G + +Y I+ L R + A+ +
Sbjct: 406 VRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLS 465
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
M PD II+ FCK GKA A L K + + LI +C+
Sbjct: 466 SMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVG 525
Query: 317 ET--VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
+T L+ L +++ ++ C++K+ +L K+ G P
Sbjct: 526 KTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKE---ELAMLGKINKLGLVPSVV 582
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
+ +++ ++GD+T + +L+LM+ G P+VY YT +++G G++EEA ++L+
Sbjct: 583 TYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAM 642
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL--KA 492
+ + + VTY +++GY + D AL+ + M + G + N Y+ L+Q L K
Sbjct: 643 QDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKG 702
Query: 493 LDWRTAEKLLEDMRLK 508
+D + E + D+ L+
Sbjct: 703 ID-NSEESTVSDIALR 717
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 101/269 (37%), Gaps = 40/269 (14%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I + G+ + A ++ + D G N TY ++ D A M+E G
Sbjct: 622 IINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERG 681
Query: 263 SLPDSEKVGKIISWFC---KGGKAKEAHVVYTLA-REKKMYPPQSV-------------- 304
+ ++ F KG E V +A RE P+ +
Sbjct: 682 YELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETD---PECINELISVVEQLGGCI 738
Query: 305 ---VAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
FL++ LC+E DE+ L ++L E + K ++ S C K
Sbjct: 739 SGLCIFLVTRLCKEGRTDESNDLVQNVL-----ERGVFLEKAMDIIMESYCSKKKHTKCM 793
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM-LKLMRSRGL--KPDVYTYT-GL 414
L++ ++ G P F VI K GD A E+ ++L+ S G+ K V TY L
Sbjct: 794 ELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTYVECL 853
Query: 415 MSGYANGGQMEEACEILNEAKKNHSRLSP 443
M G G + E+++ + H R P
Sbjct: 854 MEGDETG----DCSEVIDLVDQLHCRERP 878
>gi|255660830|gb|ACU25584.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 418
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 124/244 (50%), Gaps = 2/244 (0%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
+I+ + + G ++A Y L RE K + P ++ L + + KL ++
Sbjct: 72 LITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKL-KYFKLVWGFYEEILEC 130
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
++ F+ ++ C+ D+ A+++ + + G P FN++++ Y + GD+
Sbjct: 131 GYPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEG 190
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
+ M + G++PDVYTY+ L++G +M++A E+ +E + VT+ TLI G
Sbjct: 191 FRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDG 250
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
+CK D A+++ +M + P++ YN LI LC K D + A L+++M +KGL
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKG-DLKQARDLIDEMSMKGLKP 309
Query: 513 NGIT 516
+ IT
Sbjct: 310 DKIT 313
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 165/391 (42%), Gaps = 57/391 (14%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L++ + S GK A++ + E ++ + + + LI + + G + A E +
Sbjct: 34 SLIQVVVSRKGKGSASAVFAAILETKGTQRS--DIYVFSGLITAYLESGFLRDAIECYRL 91
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
++ +T +E L + K F W E+++E G ++ FCK G
Sbjct: 92 TREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHKFCKDGD 151
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAF----------------------------------- 307
+ A V+ + + P SVV+F
Sbjct: 152 IRVAQSVFNAITKWGLRP--SVVSFNTLMNGYIRLGDLDEGFRLKTAMHASGVQPDVYTY 209
Query: 308 --LISSLCQE---DETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAK 358
LI+ LC+E D+ +L +MLD + P F+++I C+ V A
Sbjct: 210 SVLINGLCKESKMDDANELFDEMLDK--------GLVPNGVTFTTLIDGHCKNGRVDLAM 261
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+ +M+S+ P +N++I + GD+ A +++ M +GLKPD TYT L+ G
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDGX 321
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G +E A E + + +L V Y LI G C+ + A K+L EM VG++P+
Sbjct: 322 CKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVLREMLSVGLKPDT 381
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
Y +I C K W T KLL++M+ G
Sbjct: 382 ITYTMIINEFCKKGDVW-TGSKLLKEMQRDG 411
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 132/304 (43%), Gaps = 5/304 (1%)
Query: 175 KEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQET 234
K V+ ++ + E G ++ N L+ F K G + A VFN +G + +
Sbjct: 118 KLVWGFYEEILECGYPA----SLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVS 173
Query: 235 YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR 294
+ + R D + + M +G PD +I+ CK K +A+ ++
Sbjct: 174 FNTLMNGYIRLGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 233
Query: 295 EKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDV 354
+K + P LI C+ V LA+++ ++ + ++++I LCR D+
Sbjct: 234 DKGLVPNGVTFTTLIDGHCKNGR-VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDL 292
Query: 355 HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
A+ L+ +M +G P + ++I K GD+ A E K M ++ D YT L
Sbjct: 293 KQARDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTAL 352
Query: 415 MSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV 474
+SG G+ +A ++L E + +TY +I +CK + KLL EM+ G
Sbjct: 353 ISGLCQEGRYLDAEKVLREMLSVGLKPDTITYTMIINEFCKKGDVWTGSKLLKEMQRDGQ 412
Query: 475 QPNV 478
P+V
Sbjct: 413 MPSV 416
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 111/246 (45%), Gaps = 1/246 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N L+ + +LG F + G + TY I L + D A + ++M+
Sbjct: 174 FNTLMNGYIRLGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 233
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G +P+ +I CK G+ A +Y + + P LI LC++ + +
Sbjct: 234 DKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGD-L 292
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
K A D++D+ S + K ++++I C+ D+ A +MI E + + ++
Sbjct: 293 KQARDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTAL 352
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
IS + G A ++L+ M S GLKPD TYT +++ + G + ++L E +++
Sbjct: 353 ISGLCQEGRYLDAEKVLREMLSVGLKPDTITYTMIINEFCKKGDVWTGSKLLKEMQRDGQ 412
Query: 440 RLSPVT 445
S VT
Sbjct: 413 MPSVVT 418
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 75/177 (42%), Gaps = 20/177 (11%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS-EGPPPGNAVFNSVISAYSKAGDMTPAM 393
++ + + ++I LC + + AK+L+ ++S +G +AVF +++
Sbjct: 10 RHTLDSYCTMIHLLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQ------- 62
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
+ D+Y ++GL++ Y G + +A E +++ + T ++
Sbjct: 63 -----------RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHL 111
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
KL+ F E+ + G ++ +N L+ C K D R A+ + + GL
Sbjct: 112 MKLKYFKLVWGFYEEILECGYPASLYFFNILMHKFC-KDGDIRVAQSVFNAITKWGL 167
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 149/337 (44%), Gaps = 21/337 (6%)
Query: 161 VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVF 220
+ +LL C S + AL D + E+G K +++ L K A +
Sbjct: 156 LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH----NKASEAVALV 211
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL-PDSEKVGKIISWFCK 279
++ GC + TY + L +R D A S+ +KM E G + D II CK
Sbjct: 212 DQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYNTIIDGLCK 270
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKY 336
+A ++T K + P + LIS LC + +L DM++ RK
Sbjct: 271 YKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE------RK- 323
Query: 337 AIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
I P FS++I + + + A+ L +MI P ++S+I+ + + A
Sbjct: 324 -INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 382
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
M +LM S+ P+V TY+ L+ G+ ++EE E+ E + + VTY TLI G
Sbjct: 383 KHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHG 442
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + + D A + +M VGV PN+ YN L+ LC
Sbjct: 443 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 131/291 (45%), Gaps = 1/291 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N+L++ +K+ K + + + G + TY I RR A +V KM+
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G PD + +++ +C + +A + E P LI L ++
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
+ A+ ++D + + + +V+ LC+ D+ A +LL KM ++N++
Sbjct: 206 E-AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTI 264
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I K M A+ + M ++G++PDV+TY+ L+S N G+ +A +L++ +
Sbjct: 265 IDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKI 324
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
+ VT+ LI + K + A KL +EM + P++ Y+ LI C+
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 375
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 144/318 (45%), Gaps = 2/318 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI+ G+ A + + + N T+ I+A + A + ++MI+
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD +I+ FC + EA ++ L K +P + LI C+ + V+
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA-KRVEEG 417
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+++ + S ++++I + +D A+ + +M+S G P +N ++
Sbjct: 418 MELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDG 477
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
K G + AM + + ++ ++PD+YTY ++ G G++E+ E+ +
Sbjct: 478 LCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPN 537
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
+ Y+T+I G+C+ + A LL +MK+ G PN YN LI++ L+ D + +L+
Sbjct: 538 VIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRAR-LRDGDREASAELI 596
Query: 503 EDMRLKGLHLNGITRALI 520
++MR G + T L+
Sbjct: 597 KEMRSCGFAGDASTIGLV 614
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 4/222 (1%)
Query: 306 AFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI 365
+ I+ C+ + + LAL +L + I SS++ C K + A L+ +M+
Sbjct: 122 SIFINCFCRRSQ-LSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
G P F ++I + A+ ++ M RG +PD+ TY +++G G ++
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
A +L + +K V Y+T+I G CK + D AL L EM + G++P+V Y+ LI
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 486 QSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRA-VKE 525
LC W A +LL DM + ++ N +T ALI A VKE
Sbjct: 301 SCLCNYG-RWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 341
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 330 SGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
SG+ R+ S +I+ V A L M+ P P FN ++SA +K
Sbjct: 47 SGDYREILRNRLSDIIK-------VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF 99
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
+ + + M++ G+ D+YTY+ ++ + Q+ A +L + K VT +L
Sbjct: 100 ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSL 159
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
+ GYC + A+ L+++M ++G +P+ + LI L L
Sbjct: 160 LNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 98/198 (49%), Gaps = 7/198 (3%)
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKY-AIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
+S + + D+ V L DM+ ++R + +I F+ ++ ++ +M +L +M +
Sbjct: 58 LSDIIKVDDAVDLFGDMV-----KSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G ++ I+ + + ++ A+ +L M G +PD+ T + L++GY + ++ +A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
++++ + + T+ TLI G + A+ L+++M G QP++ Y ++
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 488 LCLKALDWRTAEKLLEDM 505
LC + D A LL+ M
Sbjct: 233 LCKRG-DIDLALSLLKKM 249
>gi|42570531|ref|NP_850859.2| SNF1-like protein kinase [Arabidopsis thaliana]
gi|75160582|sp|Q8S9D1.1|PP395_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g21222; AltName: Full=SNF1-like protein kinase AtC401
gi|19071860|dbj|BAB85674.1| SNF1-like protein kinase [Arabidopsis thaliana]
gi|332005563|gb|AED92946.1| SNF1-like protein kinase [Arabidopsis thaliana]
Length = 831
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 166/371 (44%), Gaps = 23/371 (6%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
+ +A++ A S + +++ +KE G K T N LI + K+GK + + +
Sbjct: 391 LFNAIINASSESGNLDQAMKIFEKMKESGCKP----TASTFNTLIKGYGKIGKLEESSRL 446
Query: 220 FNK-FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+ D N T ++A ++ + AW++ KM G PD + +
Sbjct: 447 LDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYA 506
Query: 279 KGGKAKEAH-VVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEAR 334
+ G A ++ K+ P +++ C+E +E ++ M +
Sbjct: 507 RIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM--------K 558
Query: 335 KYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
+ + P F+S+I+ + D+ G ++ M G P F+++++A+S GDM
Sbjct: 559 ELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMK 618
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
E+ M G+ PD++ ++ L GYA G+ E+A +ILN+ +K R + V Y +I
Sbjct: 619 RCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQII 678
Query: 451 RGYCKLEEFDCALKLLNEMKD-VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
G+C E A+++ +M VG+ PN+ Y LI W+ AE+LL+DM K
Sbjct: 679 SGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWK-AEELLKDMEGKN 737
Query: 510 LHLNGITRALI 520
+ T LI
Sbjct: 738 VVPTRKTMQLI 748
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 152/318 (47%), Gaps = 12/318 (3%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+++N LI + G+ + A +FN + G + TY + AL+R+K F S+
Sbjct: 323 TKLMNGLI----ERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLIS 378
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI---SSLC 313
K+ + G PD+ II+ + G +A ++ +E P S LI +
Sbjct: 379 KVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIG 438
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
+ +E+ +L ML D E + + + ++++ C + + A ++ KM S G P
Sbjct: 439 KLEESSRLLDMMLRD---EMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDV 495
Query: 374 AVFNSVISAYSKAGDMTPAMEM-LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
FN++ AY++ G A +M + M +KP+V T +++GY G+MEEA
Sbjct: 496 VTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFY 555
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
K+ + +++LI+G+ + + D ++++ M++ GV+P+V ++ L+ +
Sbjct: 556 RMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWS-SV 614
Query: 493 LDWRTAEKLLEDMRLKGL 510
D + E++ DM G+
Sbjct: 615 GDMKRCEEIYTDMLEGGI 632
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
DV + T LM+G G+ +EA I N + + S +TY TL+ + + F L L+
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
++++ G++P+ +N +I + ++ + A K+ E M+ G
Sbjct: 378 SKVEKNGLKPDTILFNAIINA-SSESGNLDQAMKIFEKMKESG 419
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 141/317 (44%), Gaps = 8/317 (2%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
T+ N LI+ + + A + K G A+ TY ++ L + A +
Sbjct: 151 TLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLL 210
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
E+M +G PD + CK GK +AH V R+ P ++ LC+
Sbjct: 211 ERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKS 270
Query: 316 DETVKLALDMLDDF-SGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
+ + AL+M++ S + + +S+V+ LC++ A++++ M G P
Sbjct: 271 GK-IDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVV 329
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
++S+++ KAG + A+E ++ M G KP+ TY L+ G + G++ EA ++ E
Sbjct: 330 TYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEM 389
Query: 435 KKNHSRL-----SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
S TY+ LI G CK D ALK M+ G P+ Y+ +++ L
Sbjct: 390 SSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGL- 448
Query: 490 LKALDWRTAEKLLEDMR 506
++ AE +L ++R
Sbjct: 449 ARSGRALQAEMILSEVR 465
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 135/302 (44%), Gaps = 12/302 (3%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
GC T+ I R K + A S+ +KM +G D ++ CK G+ +EA
Sbjct: 147 GCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEA 206
Query: 287 HVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSV 344
+ L R K VVA+ + LC+ + + A +L+ + ++++
Sbjct: 207 EQL--LERMKASGCAPDVVAYSSFVYGLCKSGKVLD-AHQVLEQMRDSHHDPNVVTYNTI 263
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAV-FNSVISAYSKAGDMTPAMEMLKLMRSRG 403
+ LC+ + A ++ +M S N V +++V+ K G A +++ M G
Sbjct: 264 LDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAG 323
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
+PDV TY+ L++G G++EEA E + E + + VTY +L+ G C A
Sbjct: 324 CRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAE 383
Query: 464 KLLNEM-----KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRA 518
+++ EM P+V YN LI LC KA A K + MR +G +G++ +
Sbjct: 384 RMVEEMSSGGGGGHHCPPSVSTYNALIGGLC-KAGRIDDALKFFQRMRSQGCDPDGVSYS 442
Query: 519 LI 520
I
Sbjct: 443 TI 444
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 134/285 (47%), Gaps = 12/285 (4%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL----PDSEKVGKIISWFCKGGK 282
GC N T+ + S++ CE+++ET + P+ ++ CK +
Sbjct: 5 GCPPNSVTFNALVNGFSKQ----GRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60
Query: 283 AKEAH--VVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
EA V ++R + P + L+S C+ + V+ + ++L + +
Sbjct: 61 WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGK-VEESRELLKEVISRGLRPDALM 119
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++ V+ SLC+ + A LL +MI G P FN++IS + ++ A +L+ M
Sbjct: 120 YTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMA 179
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+ G+K DV TY LM G G+++EA ++L K + V Y + + G CK +
Sbjct: 180 ASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVL 239
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
A ++L +M+D PNV YN ++ LC K+ TA +++E M
Sbjct: 240 DAHQVLEQMRDSHHDPNVVTYNTILDGLC-KSGKIDTALEMMEQM 283
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 120/254 (47%), Gaps = 39/254 (15%)
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M TG P+S +++ F K G+ + + + + P +VV+
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQP--NVVS----------- 47
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG--PPPGNAV 375
++ ++ LC+++ H A+ L+ MIS G P
Sbjct: 48 -----------------------YNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMVT 84
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+++++S Y KAG + + E+LK + SRGL+PD YT +++ ++ EA E+L E
Sbjct: 85 YSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMI 144
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+ + +T++TLI G C+ + + A LL +M GV+ +V YN L+ LC KA
Sbjct: 145 RAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLC-KAGRL 203
Query: 496 RTAEKLLEDMRLKG 509
+ AE+LLE M+ G
Sbjct: 204 QEAEQLLERMKASG 217
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 38/150 (25%)
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
M G PP + FN++++ +SK G +L+ M +R ++P+V +Y GL
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGL--------- 51
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ--PNVDEY 481
+ G CKLE + A +L+ +M G + P++ Y
Sbjct: 52 --------------------------LEGLCKLERWHEAEELVRDMISRGGRSTPDMVTY 85
Query: 482 NKLIQSLCLKALDWRTAEKLLEDMRLKGLH 511
+ L+ C KA + +LL+++ +GL
Sbjct: 86 STLLSGYC-KAGKVEESRELLKEVISRGLR 114
>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 512
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 139/291 (47%), Gaps = 4/291 (1%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G +N T I S+ ++SV +++ G PD+ + +I C G +A
Sbjct: 99 GIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKA 158
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
+ Q LI+ LC+ +T K AL+ML G+ + + ++++I
Sbjct: 159 LHFHDKVLALGFQLNQVSYRTLINGLCKVGQT-KAALEMLRRIDGKLVRLDVVMYNTIID 217
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
+C+ K V+ A S+M+++ P +N++I G + A+ +L M + P
Sbjct: 218 GVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINP 277
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
VYT++ L+ + G+++EA + K + + VTY++L+ GYC + E + A +
Sbjct: 278 TVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIF 337
Query: 467 NEMKDVGVQPNVDEYNKLIQSLC-LKALDWRTAEKLLEDMRLKGLHLNGIT 516
N M +GV P+V Y+ +I C +K +D A KL E+M K + + +T
Sbjct: 338 NTMAQIGVAPDVHSYSIMISGFCKIKMVD--EAMKLFEEMHCKQIFPDVVT 386
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 146/319 (45%), Gaps = 6/319 (1%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
L+ LI FS+LG +F VF+ G + T I+ L + A +K++
Sbjct: 107 LSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVL 166
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDE 317
G + +I+ CK G+ K A + L R VV + +I +C+ D+
Sbjct: 167 ALGFQLNQVSYRTLINGLCKVGQTKAA--LEMLRRIDGKLVRLDVVMYNTIIDGVCK-DK 223
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
V A D + + + ++++I LC M + A LL KMI E P F+
Sbjct: 224 LVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFS 283
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
++ A+ K G + A + +M + +KP++ TY LM+GY ++ +A I N +
Sbjct: 284 ILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQI 343
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
+Y +I G+CK++ D A+KL EM + P+V YN LI LC K+
Sbjct: 344 GVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLC-KSGRISY 402
Query: 498 AEKLLEDMRLKGLHLNGIT 516
A KL+ +M +G N IT
Sbjct: 403 ALKLIGEMHDRGQPPNIIT 421
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 111/243 (45%), Gaps = 1/243 (0%)
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A + KMI P ++ FCK GK KEA V+ + +K + P L++
Sbjct: 263 AIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMN 322
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
C +E K A + + + + +S +I C++K V A L +M +
Sbjct: 323 GYCLVNEVNK-AESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIF 381
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P +NS+I K+G ++ A++++ M RG P++ TY L+ +++A E+
Sbjct: 382 PDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIEL 441
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
L + K ++ + S TY+ LI G CK A K+ ++ G +V YN +I+ C
Sbjct: 442 LTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCK 501
Query: 491 KAL 493
K
Sbjct: 502 KGF 504
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 130/334 (38%), Gaps = 30/334 (8%)
Query: 94 EEAYEIDGDKLENVLSLLQSSVDGYLESSLDSFELDLHEDFVLKVLETPLVLGENLVCFF 153
E IDG + + + + +DG + L + D + + V K + +V L+C
Sbjct: 195 EMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLIC-- 252
Query: 154 KWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVL-----TVEILNELIALFS 208
+C + + IG K +L TV + L+ F
Sbjct: 253 -------------GLC---------IMGQLKDAIGLLHKMILENINPTVYTFSILVDAFC 290
Query: 209 KLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSE 268
K GK K A VF N TY + + A S+ M + G PD
Sbjct: 291 KEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVH 350
Query: 269 KVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDD 328
+IS FCK EA ++ K+++P LI LC+ + AL ++ +
Sbjct: 351 SYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGR-ISYALKLIGE 409
Query: 329 FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD 388
+ I ++S++ +LC+ V A LL+K+ P +N +I+ K+G
Sbjct: 410 MHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGR 469
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG 422
+ A ++ + + G DVYTY ++ G+ G
Sbjct: 470 LKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKG 503
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 71/153 (46%)
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+I F ++ SL + +L +M G + +I+ +S+ G + + +
Sbjct: 68 SIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVF 127
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
+ +G +PD T T L+ G G + +A ++ +L+ V+Y TLI G CK+
Sbjct: 128 SNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKV 187
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ AL++L + V+ +V YN +I +C
Sbjct: 188 GQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVC 220
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 31/155 (20%), Positives = 64/155 (41%), Gaps = 1/155 (0%)
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE-GPPPGNAVFNSVISAYSKAGDMTPAME 394
+ +SS S +H + + ++ + P P F ++ + KA + +
Sbjct: 31 HCFTSYSSFSNSTTLYSQLHNLVSSFNHLLHQKNPTPSIIQFGKILGSLVKANHYSIVVS 90
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+ + M G+ ++ T + L++ ++ G + + + K +T TLI+G C
Sbjct: 91 LHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLC 150
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ AL +++ +G Q N Y LI LC
Sbjct: 151 LKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLC 185
>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
[Coelocarpum swinglei]
Length = 429
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 138/280 (49%), Gaps = 4/280 (1%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSE--KVGKIISWFCKGGKAKEAHVVYTLAREK 296
I+ + RK + A +V ++ET S+ +I+ + + G ++A Y L RE
Sbjct: 40 IQVVVSRKGKNSASAVFAAILETQGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREH 99
Query: 297 KMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHG 356
K + P ++ L + + KL + ++ F+ ++ C+ D+
Sbjct: 100 KFWVPFDTCRKVLEHL-MKLKYFKLVWXFYKEILECGYPASLYFFNILMHRFCKEGDIRV 158
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A ++ + G P FN++++ Y + GD+ + M + G++PDVYTY+ L++
Sbjct: 159 ALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLIN 218
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
G +M++A E+ +E + VT+ TLI G+CK D A+++ +M + P
Sbjct: 219 GLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSP 278
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++ YN LI LC K D + A+ L+++MR+KGL + I+
Sbjct: 279 DLITYNTLIYGLCKKG-DLKQAQDLIDEMRMKGLKPDKIS 317
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 164/390 (42%), Gaps = 57/390 (14%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
L++ + S GK A++ + E ++ + + + LI + + G + A E +
Sbjct: 39 LIQVVVSRKGKNSASAVFAAILETQGTQRS--DIYVFSGLITAYLESGFLRDAIECYRLT 96
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
++ +T +E L + K F W ++++E G ++ FCK G
Sbjct: 97 REHKFWVPFDTCRKVLEHLMKLKYFKLVWXFYKEILECGYPASLYFFNILMHRFCKEGDI 156
Query: 284 KEAHVVYTLAREKKMYPPQSVVAF------------------------------------ 307
+ A V+ + + P SVV+F
Sbjct: 157 RVALSVFDAITKWGLRP--SVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYS 214
Query: 308 -LISSLCQE---DETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKT 359
LI+ LC+E D+ +L +MLD + P F+++I C+ V A
Sbjct: 215 VLINGLCKESKMDDANELFDEMLDK--------GLVPNGVTFTTLIDGHCKNGRVDLAME 266
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
+ +M+S+ P +N++I K GD+ A +++ MR +GLKPD +YT L+ G
Sbjct: 267 VYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLIDGCC 326
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
G +E A E + + RL V Y LI G C+ A K+L EM VG++P+
Sbjct: 327 KEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLREMLSVGLRPDTG 386
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
Y +I C K W T KLL++M+ G
Sbjct: 387 TYTMIINEFCKKGDVW-TGSKLLKEMQRDG 415
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 133/307 (43%), Gaps = 2/307 (0%)
Query: 180 LWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI 239
+W KEI E ++ N L+ F K G + A VF+ +G + ++ +
Sbjct: 124 VWXFYKEILECGYPA-SLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLM 182
Query: 240 EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
R D + + M +G PD +I+ CK K +A+ ++ +K +
Sbjct: 183 NGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLV 242
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P LI C+ V LA+++ ++ + ++++I LC+ D+ A+
Sbjct: 243 PNGVTFTTLIDGHCKNGR-VDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQD 301
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
L+ +M +G P + ++I K GD+ A E K M ++ D YT L+SG
Sbjct: 302 LIDEMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLC 361
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
G+ +A ++L E R TY +I +CK + KLL EM+ G P+V
Sbjct: 362 QEGRSIDAEKMLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVV 421
Query: 480 EYNKLIQ 486
YN L+
Sbjct: 422 TYNVLMN 428
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 133/295 (45%), Gaps = 13/295 (4%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ C + +++D + + G + +V N L+ + +LG F + +
Sbjct: 144 NILMHRFCKEGDIRVALSVFDAITKWGLRP----SVVSFNTLMNGYIRLGDLDEGFRLKS 199
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G + TY I L + D A + ++M++ G +P+ +I CK G
Sbjct: 200 AMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNG 259
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP- 340
+ A VY + + P LI LC++ + +K A D++D E R +KP
Sbjct: 260 RVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGD-LKQAQDLID----EMRMKGLKPD 314
Query: 341 ---FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
++++I C+ D+ A +MI E + + ++IS + G A +ML+
Sbjct: 315 KISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLR 374
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
M S GL+PD TYT +++ + G + ++L E +++ S VTY+ L+ G
Sbjct: 375 EMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 429
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 116/240 (48%), Gaps = 13/240 (5%)
Query: 301 PQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
P S+ F L+ C+E + +++AL + D + + ++ F++++ R+ D+
Sbjct: 137 PASLYFFNILMHRFCKEGD-IRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 195
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
L S M + G P ++ +I+ K M A E+ M +GL P+ T+T L+ G+
Sbjct: 196 RLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGH 255
Query: 419 ANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
G+++ A E+ + LSP +TY+TLI G CK + A L++EM+ G++P
Sbjct: 256 CKNGRVDLAMEVYKQMLSQ--SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKP 313
Query: 477 NVDEYNKLIQSLCLKALDWRTA-----EKLLEDMRLKGLHLNGITRALIRAVKELEEDAI 531
+ Y LI C K D TA + E++RL + + L + + ++ + +
Sbjct: 314 DKISYTTLIDG-CCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKM 372
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 156/331 (47%), Gaps = 13/331 (3%)
Query: 194 VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWS 253
VLTV I+ I K K + A +F D C N T+ I+ L + D A+S
Sbjct: 194 VLTVNIM---IDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYS 250
Query: 254 VCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC 313
+ EKM++ G +P + +I F K G+ ++ H +Y P +++ + +
Sbjct: 251 LYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVF 310
Query: 314 QEDETVK---LALDM-LDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
+ ET K L ++ F +AR Y+I +I L + + L M +G
Sbjct: 311 KAGETEKGRALFREINAHGFIPDARSYSI-----LIHGLVKAGLANETYELFYAMKEQGC 365
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
+N+VI + K+G + A ++L+ M+ +G P V TY ++ G A +++EA
Sbjct: 366 VLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYM 425
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ EAK N +L+ V Y +LI G+ K+ D A ++ E+ G+ PNV +N L+ +L
Sbjct: 426 LFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDAL- 484
Query: 490 LKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
+KA + A + M+ N IT +++
Sbjct: 485 VKAEEINEALICFQSMKDLKCPPNQITYSIL 515
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 147/340 (43%), Gaps = 10/340 (2%)
Query: 150 VCFFKWVT-SGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFS 208
VC VT S ++D L K C V + Y+L++ + + G + + LI F
Sbjct: 224 VCTPNAVTFSSLIDGLGK--CGRV--DDAYSLYEKMLDCGHVPGAI----VYTSLIRSFF 275
Query: 209 KLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSE 268
K G+ + +++ + GC + ++ + + + ++ ++ G +PD+
Sbjct: 276 KCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDAR 335
Query: 269 KVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDD 328
+I K G A E + ++ +E+ +I C+ + K A +L++
Sbjct: 336 SYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNK-AYQLLEE 394
Query: 329 FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD 388
+ + + SVI L ++ + A L + S G V++S+I + K G
Sbjct: 395 MKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGR 454
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHT 448
+ A +++ + +GL P+VYT+ L+ ++ EA K + +TY
Sbjct: 455 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSI 514
Query: 449 LIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
LI G C++ +F+ A EM+ +G++PN Y +I L
Sbjct: 515 LINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGL 554
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 158/350 (45%), Gaps = 21/350 (6%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+ ++N + K G+ + +F + +G + + +Y I L + + + + +
Sbjct: 299 LTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFY 358
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM--YPPQSVVAF--LISSL 312
M E G + D+ +I FCK GK +A Y L E K+ +PP +VV + +I L
Sbjct: 359 AMKEQGCVLDTHAYNAVIDGFCKSGKVNKA---YQLLEEMKVKGHPP-TVVTYGSVIDGL 414
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
+ D + A + ++ K + +SS+I ++ + A ++ +++ +G P
Sbjct: 415 AKIDR-LDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPN 473
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+N ++ A KA ++ A+ + M+ P+ TY+ L++G + +A
Sbjct: 474 VYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQ 533
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL--CL 490
E +K + + +TY T+I G K A L + K G P+ YN +I+ L
Sbjct: 534 EMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSAN 593
Query: 491 KALDWRTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIENGEALVEA 540
KA+D A L E+ RLKG +++ T ++ DA+ E L +A
Sbjct: 594 KAMD---AYALFEETRLKGCNIHTKTCVVLL-------DALHKAECLEQA 633
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 115/297 (38%), Gaps = 38/297 (12%)
Query: 248 FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF 307
FD A+ + E+ GS+P I++ K + +EA ++ ++ P
Sbjct: 106 FDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFE-EMKRDAVPNVPTYNI 164
Query: 308 LISSLCQEDETVKLALDMLDD--------------------------------FSGEARK 335
LI LC+E + + AL++ DD F G K
Sbjct: 165 LIDMLCREGK-LNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDK 223
Query: 336 YAIK---PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
FSS+I L + V A +L KM+ G PG V+ S+I ++ K G
Sbjct: 224 VCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDG 283
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
++ K M G PD+ M G+ E+ + E + +Y LI G
Sbjct: 284 HKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHG 343
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
K + +L MK+ G + YN +I C K+ A +LLE+M++KG
Sbjct: 344 LVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFC-KSGKVNKAYQLLEEMKVKG 399
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 11/149 (7%)
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT------GLMSGY--- 418
G P + + +++ K+ + A ++++ MR +P YT GLM +
Sbjct: 5 GFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWV 64
Query: 419 -ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
+++EA E+ + ++N Y+T+I GY +FD A LL K G P+
Sbjct: 65 LCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPS 124
Query: 478 VDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
V YN ++ L K A ++ E+M+
Sbjct: 125 VIAYNCILTCLG-KKRRVEEALRIFEEMK 152
>gi|125539212|gb|EAY85607.1| hypothetical protein OsI_06979 [Oryza sativa Indica Group]
Length = 538
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 135/294 (45%), Gaps = 12/294 (4%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+ ++ G+ A + F++ G N + I+ +RR FD AW + K
Sbjct: 98 NTLVNALAEAGREGEALKAFDEMLASGVAPNASSQNILIKMHARRSEFDLAWELIHK--- 154
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
+G PD +I+ C+ GK EA V EK P ++ + C++ V+
Sbjct: 155 SGVEPDVGTYSTLIAGLCRAGKVVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVE 214
Query: 321 LALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
L M E + P ++ +IR+LC + +L + ++ P +
Sbjct: 215 AKLLM-----AEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTY 269
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N ++ K G A+E+L +M GL+P YT++ L++ + ++ +A +L + +
Sbjct: 270 NIYMNGLCKKGKAKEALELLDVMLGEGLEPTAYTWSILLNCLCHSSRLLDAIYLLERSTE 329
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
V Y+T++ C++ ++ +KLL +M G++PN +N LI+SLC+
Sbjct: 330 LKWYAGVVAYNTVMSSLCEMGKWRGIMKLLTDMIKKGIEPNTRTFNILIRSLCV 383
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 136/305 (44%), Gaps = 10/305 (3%)
Query: 159 GVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFE 218
G L+ +C + GK V W ++ + EK + V+ ++ + + G+ A
Sbjct: 162 GTYSTLIAGLCRA-GK--VVEAWGVLDWMLEKNCRPM-VQTYTPIVQAYCRDGRIVEAKL 217
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+ + GC+ N TY I AL FD V + P + ++ C
Sbjct: 218 LMAEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNGLC 277
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA- 337
K GKAKEA + + + + P + L++ LC + A+ +L+ S E + YA
Sbjct: 278 KKGKAKEALELLDVMLGEGLEPTAYTWSILLNCLCHSSRLLD-AIYLLER-STELKWYAG 335
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+ +++V+ SLC M G LL+ MI +G P FN +I + G + A
Sbjct: 336 VVAYNTVMSSLCEMGKWRGIMKLLTDMIKKGIEPNTRTFNILIRSLCVGGKSSLAKS--- 392
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
L+ S+G +V TY L+ + G++ EA +++ ++ + VTY +I G C+
Sbjct: 393 LIHSQGFAANVVTYNILLHWFYYHGKLTEANRLISVMEEKNIAPDEVTYTIIIDGLCRER 452
Query: 458 EFDCA 462
+FD A
Sbjct: 453 KFDAA 457
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 32/154 (20%)
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAM----EML--------------------------- 396
G PP +N++++A ++AG A+ EML
Sbjct: 89 GAPPNVLCYNTLVNALAEAGREGEALKAFDEMLASGVAPNASSQNILIKMHARRSEFDLA 148
Query: 397 -KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
+L+ G++PDV TY+ L++G G++ EA +L+ + + R TY +++ YC+
Sbjct: 149 WELIHKSGVEPDVGTYSTLIAGLCRAGKVVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCR 208
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A L+ EM+ +G PNV YN LI++LC
Sbjct: 209 DGRIVEAKLLMAEMERLGCLPNVVTYNVLIRALC 242
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 1/153 (0%)
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P ++++I+ +AG + A +L M + +P V TYT ++ Y G++ EA
Sbjct: 156 GVEPDVGTYSTLIAGLCRAGKVVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEA 215
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
++ E ++ + VTY+ LIR C ++FD ++L E +P+ YN +
Sbjct: 216 KLLMAEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNG 275
Query: 488 LCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
LC K + A +LL+ M +GL T +++
Sbjct: 276 LCKKG-KAKEALELLDVMLGEGLEPTAYTWSIL 307
>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 142/327 (43%), Gaps = 5/327 (1%)
Query: 159 GVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFE 218
G++ L+ +C + LW G V+ N L+ + GK AF
Sbjct: 471 GLLTTLISGLCKHGKHSKALELWFQFLNKG----FVVDTRTSNALLHGLCEAGKLDEAFR 526
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+ + GCV ++ +Y I +K D A+ ++M++ G PD+ +I
Sbjct: 527 IQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLF 586
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
K +EA + + M P + +I C+ + T + + D+ + +
Sbjct: 587 NMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE-GQEFFDEMMSKNVQPNT 645
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
++ +IR+ CR + A L M +G P +A + S+I S + A + +
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 705
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
MR GL+P+V+ YT L+ GY GQM + +L E + + +TY +I GY +
Sbjct: 706 MRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGN 765
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLI 485
A +LLNEM++ G+ P+ Y + I
Sbjct: 766 VTEASRLLNEMREKGIVPDSITYKEFI 792
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 138/322 (42%), Gaps = 8/322 (2%)
Query: 195 LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSV 254
LT N LI + K G+ A + + G NQ ++ I L +FD A
Sbjct: 398 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 457
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
+M+ P + +IS CK GK +A ++ K L+ LC+
Sbjct: 458 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCE 517
Query: 315 E---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
DE ++ ++L G ++++I C K + A L +M+ G P
Sbjct: 518 AGKLDEAFRIQKEIL----GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKP 573
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
N ++ +I + A++ + G+ PDVYTY+ ++ G + EE E
Sbjct: 574 DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF 633
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
+E + + + V Y+ LIR YC+ AL+L +MK G+ PN Y LI+ + +
Sbjct: 634 DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII 693
Query: 492 ALDWRTAEKLLEDMRLKGLHLN 513
+ A+ L E+MR++GL N
Sbjct: 694 S-RVEEAKLLFEEMRMEGLEPN 714
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 142/328 (43%), Gaps = 16/328 (4%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
V + N LI F + G A E+ + G TY I+ + D A +
Sbjct: 364 NVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL 423
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE-------KKMYPPQSVVAFL 308
++M+ G + +I C +H+++ A + M P ++ L
Sbjct: 424 KEMLSIGFNVNQGSFTSVICLLC-------SHLMFDSALRFVGEMLLRNMSPGGGLLTTL 476
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
IS LC+ + K AL++ F + + ++++ LC + A + +++ G
Sbjct: 477 ISGLCKHGKHSK-ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
+N++IS + A L M RGLKPD YTY+ L+ G N ++EEA
Sbjct: 536 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAI 595
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ ++ K+N TY +I G CK E + + +EM VQPN YN LI++
Sbjct: 596 QFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAY 655
Query: 489 CLKALDWRTAEKLLEDMRLKGLHLNGIT 516
C ++ A +L EDM+ KG+ N T
Sbjct: 656 C-RSGRLSMALELREDMKHKGISPNSAT 682
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 125/279 (44%), Gaps = 12/279 (4%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK--MIETGSLPDSEKVGKI 273
A +VF + G ++ T + +L R F CE ++ G PD
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQ---KCCEAFDVVCKGVSPDVYLFTTA 266
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSL--C-QEDETVKLALDMLDDFS 330
I+ FCKGGK +EA +++ E + P +I L C + DE M++
Sbjct: 267 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE--- 323
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
+ + +S +++ L R K + A +L +M +G PP V+N++I ++ +AG +
Sbjct: 324 -RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN 382
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A+E+ LM S+GL TY L+ GY GQ + A +L E ++ ++ ++I
Sbjct: 383 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 442
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
C FD AL+ + EM + P LI LC
Sbjct: 443 CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLC 481
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 135/328 (41%), Gaps = 38/328 (11%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V + I F K GK + A ++F+K + G N T+ I+ L +D A+ E
Sbjct: 260 VYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKE 319
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVV-AFLISSLCQE 315
KM+E G P ++ + + +A+ V KK +PP +V LI S E
Sbjct: 320 KMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLK-EMTKKGFPPNVIVYNNLIDSFI-E 377
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG------- 368
++ A+++ D + ++++I+ C+ A+ LL +M+S G
Sbjct: 378 AGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGS 437
Query: 369 ----------------------------PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
PG + ++IS K G + A+E+
Sbjct: 438 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL 497
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
++G D T L+ G G+++EA I E + V+Y+TLI G C ++ D
Sbjct: 498 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 557
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSL 488
A L+EM G++P+ Y+ LI L
Sbjct: 558 EAFMFLDEMVKRGLKPDNYTYSILICGL 585
>gi|357500143|ref|XP_003620360.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495375|gb|AES76578.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 426
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 136/283 (48%), Gaps = 2/283 (0%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
+Q Y I L + K+ A+ + +M+ PD +I FC G+ ++A ++
Sbjct: 100 DQFMYSMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLF 159
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
R K + P LI LC+E + VK +L ++ K + SS+I
Sbjct: 160 NEMRLKNIVPNVCSFNILIDGLCKEGD-VKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFL 218
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+K + A+ + + M G +N +I+ SKA + A+ + K M+ + + PD T
Sbjct: 219 VKKANKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTIT 278
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
Y+ L+ G G++ ++++E + + +TY +L+ CK FD A+++ ++K
Sbjct: 279 YSTLIDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIK 338
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
D G +PN+ YN L+ LC K + A+++ D+ +KG L+
Sbjct: 339 DKGFEPNMVTYNILVDGLC-KNGRLKDAQEIFHDLLIKGYRLD 380
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 102/240 (42%), Gaps = 24/240 (10%)
Query: 299 YPPQSV-VAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRM------ 351
Y P +V + L+ LC +E VK AL DD + + + ++I LC+
Sbjct: 41 YQPDTVTLTTLLKGLCINNE-VKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKAP 99
Query: 352 ---------------KDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
K V A L +M+ + P +N++I + G + A+ +
Sbjct: 100 DQFMYSMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLF 159
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
MR + + P+V ++ L+ G G ++ +L K + VT +LI GY +
Sbjct: 160 NEMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLV 219
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++ + A + N M GV ++ YN +I L KA A L ++M+ K + + IT
Sbjct: 220 KKANKARYIFNAMAQNGVTIDLRSYNIMINGLS-KAKMVDEAVILFKEMQFKSMTPDTIT 278
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 29/207 (14%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM-TPAMEMLKLM 399
+++++ LC +V A +I++G N + ++I+ K+G+ P M ++
Sbjct: 48 LTTLLKGLCINNEVKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKAPDQFMYSMI 107
Query: 400 RSRGLK--------------------PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+R K PDV TY L+ G+ GQ+E+A + NE + +
Sbjct: 108 INRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNI 167
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL--KALDWR- 496
+ +++ LI G CK + +L M V+P+V + LI L KA R
Sbjct: 168 VPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARY 227
Query: 497 -----TAEKLLEDMRLKGLHLNGITRA 518
+ D+R + +NG+++A
Sbjct: 228 IFNAMAQNGVTIDLRSYNIMINGLSKA 254
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 22/153 (14%)
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I+++ + A +L + G +PD T T L+ G ++++A ++
Sbjct: 16 LINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNEVKKALHFHDDVIAKG 75
Query: 439 SRLSPVTYHTLIRGYCKLEEFD--------------CALKLLNEMKDV-------GVQPN 477
RL V+Y TLI G CK E C KL+ + D+ + P+
Sbjct: 76 FRLDNVSYGTLINGLCKSGETKAPDQFMYSMIINRLCKDKLVVDAYDLYCEMVVKRIFPD 135
Query: 478 VDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
V YN LI C+ A +L +MRLK +
Sbjct: 136 VVTYNTLIYGFCIVG-QLEDAIRLFNEMRLKNI 167
>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
Length = 814
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 142/327 (43%), Gaps = 5/327 (1%)
Query: 159 GVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFE 218
G++ L+ +C + LW G V+ N L+ + GK AF
Sbjct: 460 GLLTTLISGLCKHGKHSKALELWFQFLNKG----FVVDTRTSNALLHGLCEAGKLDEAFR 515
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+ + GCV ++ +Y I +K D A+ ++M++ G PD+ +I
Sbjct: 516 IQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLF 575
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
K +EA + + M P + +I C+ + T + + D+ + +
Sbjct: 576 NMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE-GQEFFDEMMSKNVQPNT 634
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
++ +IR+ CR + A L M +G P +A + S+I S + A + +
Sbjct: 635 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 694
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
MR GL+P+V+ YT L+ GY GQM + +L E + + +TY +I GY +
Sbjct: 695 MRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGN 754
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLI 485
A +LLNEM++ G+ P+ Y + I
Sbjct: 755 VTEASRLLNEMREKGIVPDSITYKEFI 781
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 138/322 (42%), Gaps = 8/322 (2%)
Query: 195 LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSV 254
LT N LI + K G+ A + + G NQ ++ I L +FD A
Sbjct: 387 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 446
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
+M+ P + +IS CK GK +A ++ K L+ LC+
Sbjct: 447 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCE 506
Query: 315 E---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
DE ++ ++L G ++++I C K + A L +M+ G P
Sbjct: 507 AGKLDEAFRIQKEIL----GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKP 562
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
N ++ +I + A++ + G+ PDVYTY+ ++ G + EE E
Sbjct: 563 DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF 622
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
+E + + + V Y+ LIR YC+ AL+L +MK G+ PN Y LI+ + +
Sbjct: 623 DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII 682
Query: 492 ALDWRTAEKLLEDMRLKGLHLN 513
+ A+ L E+MR++GL N
Sbjct: 683 S-RVEEAKLLFEEMRMEGLEPN 703
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 142/328 (43%), Gaps = 16/328 (4%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
V + N LI F + G A E+ + G TY I+ + D A +
Sbjct: 353 NVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL 412
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE-------KKMYPPQSVVAFL 308
++M+ G + +I C +H+++ A + M P ++ L
Sbjct: 413 KEMLSIGFNVNQGSFTSVICLLC-------SHLMFDSALRFVGEMLLRNMSPGGGLLTTL 465
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
IS LC+ + K AL++ F + + ++++ LC + A + +++ G
Sbjct: 466 ISGLCKHGKHSK-ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 524
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
+N++IS + A L M RGLKPD YTY+ L+ G N ++EEA
Sbjct: 525 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAI 584
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ ++ K+N TY +I G CK E + + +EM VQPN YN LI++
Sbjct: 585 QFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAY 644
Query: 489 CLKALDWRTAEKLLEDMRLKGLHLNGIT 516
C ++ A +L EDM+ KG+ N T
Sbjct: 645 C-RSGRLSMALELREDMKHKGISPNSAT 671
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 125/279 (44%), Gaps = 12/279 (4%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK--MIETGSLPDSEKVGKI 273
A +VF + G ++ T + +L R F CE ++ G PD
Sbjct: 199 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQ---KCCEAFDVVCKGVSPDVYLFTTA 255
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSL--C-QEDETVKLALDMLDDFS 330
I+ FCKGGK +EA +++ E + P +I L C + DE M++
Sbjct: 256 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE--- 312
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
+ + +S +++ L R K + A +L +M +G PP V+N++I ++ +AG +
Sbjct: 313 -RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN 371
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A+E+ LM S+GL TY L+ GY GQ + A +L E ++ ++ ++I
Sbjct: 372 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 431
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
C FD AL+ + EM + P LI LC
Sbjct: 432 CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLC 470
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 135/328 (41%), Gaps = 38/328 (11%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V + I F K GK + A ++F+K + G N T+ I+ L +D A+ E
Sbjct: 249 VYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKE 308
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVV-AFLISSLCQE 315
KM+E G P ++ + + +A+ V KK +PP +V LI S E
Sbjct: 309 KMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLK-EMTKKGFPPNVIVYNNLIDSFI-E 366
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG------- 368
++ A+++ D + ++++I+ C+ A+ LL +M+S G
Sbjct: 367 AGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGS 426
Query: 369 ----------------------------PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
PG + ++IS K G + A+E+
Sbjct: 427 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL 486
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
++G D T L+ G G+++EA I E + V+Y+TLI G C ++ D
Sbjct: 487 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 546
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSL 488
A L+EM G++P+ Y+ LI L
Sbjct: 547 EAFMFLDEMVKRGLKPDNYTYSILICGL 574
>gi|242084242|ref|XP_002442546.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
gi|241943239|gb|EES16384.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
Length = 735
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 155/336 (46%), Gaps = 8/336 (2%)
Query: 184 VKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEAL- 242
V ++ +K+ + I N + + G+ A E + G + TY I+ L
Sbjct: 183 VLQLMQKDGCAPDICICNMAVNVLVVAGRIDKALEFAERMRRVGVDPDVVTYNCLIKGLC 242
Query: 243 SRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQ 302
R+I D A + M++ G LPD ++S+ CK + + + + ++P Q
Sbjct: 243 GARRIVD-ALEMISSMLQNGCLPDKISYFTVMSFLCKEKRVADVQNLLERMSDAGIFPDQ 301
Query: 303 SVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLS 362
LI L + + AL L + G+ + +S+ + S C + AK ++
Sbjct: 302 VTYNMLIHGLAKHGHADE-ALSFLRESEGKRFRVDEVGYSATVHSFCLNGRMAEAKEIIG 360
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG 422
+MIS+G P +++V+ + + G++ A +M+K M G KP+ T+T L++G G
Sbjct: 361 EMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVG 420
Query: 423 QMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
+ EA E+LN++++ S +TY ++ G+ + + + ++ +M G P E N
Sbjct: 421 KSSEAWELLNKSEEEWWTPSAITYSVVMHGFRREGKLKESCDVVMQMLQKGFFPTTVEIN 480
Query: 483 KLIQSLC--LKALDWRTAEKLLEDMRLKGLHLNGIT 516
LI +LC K D A+ +E + KG +N +
Sbjct: 481 LLIHALCNERKPAD---AKDFMEQCQSKGCFINVVN 513
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 122/280 (43%), Gaps = 12/280 (4%)
Query: 242 LSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPP 301
LSR ++ D A V MI G + + ++ + + GK + A V L ++ P
Sbjct: 136 LSRTRLHDPARRVMRLMIRRGMPRGTRQFAHLMLSYSRAGKLRSAMRVLQLMQKDGCAPD 195
Query: 302 QSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGA 357
+ ++ L V +D +F+ R+ + P ++ +I+ LC + + A
Sbjct: 196 ICICNMAVNVL-----VVAGRIDKALEFAERMRRVGVDPDVVTYNCLIKGLCGARRIVDA 250
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
++S M+ G P + +V+S K + +L+ M G+ PD TY L+ G
Sbjct: 251 LEMISSMLQNGCLPDKISYFTVMSFLCKEKRVADVQNLLERMSDAGIFPDQVTYNMLIHG 310
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
A G +EA L E++ R+ V Y + +C A +++ EM G +P+
Sbjct: 311 LAKHGHADEALSFLRESEGKRFRVDEVGYSATVHSFCLNGRMAEAKEIIGEMISKGCRPD 370
Query: 478 VDEYNKLIQSLC-LKALDWRTAEKLLEDMRLKGLHLNGIT 516
V Y+ ++ C + LD A K+++ M G N +T
Sbjct: 371 VVTYSAVVDGFCRIGELD--QARKMMKHMYKNGCKPNTVT 408
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 128/279 (45%), Gaps = 3/279 (1%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ A E+ + GC + TY ++ R D A + + M + G P++
Sbjct: 350 GRMAEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTH 409
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
+++ CK GK+ EA + + E++ + P ++ ++ + + +K + D++
Sbjct: 410 TALLNGLCKVGKSSEAWELLNKS-EEEWWTPSAITYSVVMHGFRREGKLKESCDVVMQML 468
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
+ + +I +LC + AK + + S+G F +VI +S+ GD+
Sbjct: 469 QKGFFPTTVEINLLIHALCNERKPADAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLE 528
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A+ +L M PDV TYT ++ G+M+EA ++ + +PVTY T+I
Sbjct: 529 SALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATSLVEKMLNRGLHPTPVTYRTVI 588
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
YC+ + L LL++M + + YN++I+ LC
Sbjct: 589 HRYCEKGAVEDLLNLLDKM--LAKEGFSSAYNQVIEKLC 625
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 87/182 (47%), Gaps = 1/182 (0%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
++A + F ++ L R + A+ ++ MI G P G F ++ +YS+AG + AM
Sbjct: 123 RHAPEVFDEMLVLLSRTRLHDPARRVMRLMIRRGMPRGTRQFAHLMLSYSRAGKLRSAMR 182
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+L+LM+ G PD+ ++ G++++A E ++ VTY+ LI+G C
Sbjct: 183 VLQLMQKDGCAPDICICNMAVNVLVVAGRIDKALEFAERMRRVGVDPDVVTYNCLIKGLC 242
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG 514
AL++++ M G P+ Y ++ LC K + LLE M G+ +
Sbjct: 243 GARRIVDALEMISSMLQNGCLPDKISYFTVMSFLC-KEKRVADVQNLLERMSDAGIFPDQ 301
Query: 515 IT 516
+T
Sbjct: 302 VT 303
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 100/250 (40%), Gaps = 4/250 (1%)
Query: 182 DIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEA 241
D+V ++ +K TVEI N LI K A + + GC N + I
Sbjct: 462 DVVMQMLQKGFFPTTVEI-NLLIHALCNERKPADAKDFMEQCQSKGCFINVVNFTTVIHG 520
Query: 242 LSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPP 301
SR+ + A S+ + M T PD ++ + GK KEA + + ++P
Sbjct: 521 FSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATSLVEKMLNRGLHPT 580
Query: 302 QSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLL 361
+I C E V+ L++LD A++ ++ VI LC + A LL
Sbjct: 581 PVTYRTVIHRYC-EKGAVEDLLNLLDKML--AKEGFSSAYNQVIEKLCAFGKLSEANNLL 637
Query: 362 SKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG 421
SK++ + ++ ++ G + + M R L PD+ + S A
Sbjct: 638 SKVLRTASKRDAQTCHILMDSFLNRGLPLQSYNVACRMFQRNLIPDLKLCQKVDSQLALA 697
Query: 422 GQMEEACEIL 431
G+ + A +++
Sbjct: 698 GEKQAAGKLI 707
>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g16010-like [Cucumis sativus]
Length = 637
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 174/404 (43%), Gaps = 47/404 (11%)
Query: 167 AICSSVGKKEVY----ALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
A+ S+ GK E Y L+D +KE G T +I ++A++ KL K +AA + +
Sbjct: 235 ALISAFGKLERYDFAFRLFDEMKENGLHP----TEKIYTTILAMYFKLNKVEAALRLVEE 290
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
GC TY I+ L + D A+S+ M++ G PD + +I+ + G+
Sbjct: 291 MKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGR 350
Query: 283 ------------------------------------AKEAHVVYTLAREKKMYPPQSVVA 306
A EA + + + + P A
Sbjct: 351 LEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYA 410
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
LI C+ + V+ AL +L++ + + S+I SL R K A L ++
Sbjct: 411 ILIDGFCKTNR-VEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKE 469
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
V+ +I + G ++ A+++ G PDVYTY LMSG G ++E
Sbjct: 470 NCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSGMIRAGMIDE 529
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A ++ ++N +++ ++ G K A+++ +MK+ + P+ YN ++
Sbjct: 530 AHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILS 589
Query: 487 SLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAVKELEED 529
L +A + A KL+ +M+LKG + IT +++ AV +++ED
Sbjct: 590 CLS-RAGMFEMAAKLMREMKLKGFEYDSITYSSILEAVGKVDED 632
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 133/313 (42%), Gaps = 39/313 (12%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYG-CVANQETYYFTIEALSRRKIFDWAWSV 254
T + N LI + G + E++N+ G C + TY I A + + +D+A+ +
Sbjct: 193 TATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRL 252
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
++M E G P + I++ + K K
Sbjct: 253 FDEMKENGLHPTEKIYTTILAMYFKLNK-------------------------------- 280
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
V+ AL ++++ G+ + ++ +I+ L ++ V A +L M+ +G P
Sbjct: 281 ----VEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVV 336
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG-YANGGQMEEACEILNE 433
+ N++I+ +AG + A+++ M S P+V TY ++ + + EA +
Sbjct: 337 LINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEK 396
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
K N S TY LI G+CK + AL LL EM + G P Y LI SL +A
Sbjct: 397 MKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLG-RAK 455
Query: 494 DWRTAEKLLEDMR 506
+ A +L ++++
Sbjct: 456 RYEAANELFQELK 468
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 124/291 (42%), Gaps = 2/291 (0%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
+ TY I L + D W + MI + + +I+ K +A V+
Sbjct: 123 DSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKALSVF 182
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR-KYAIKPFSSVIRSLC 349
+ +K P +V LI L E K+ ++ ++ E +S++I +
Sbjct: 183 YQIKGRKCNPTATVYNTLILMLMHEGHHEKIH-ELYNEICSEGNCSPDTITYSALISAFG 241
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
+++ A L +M G P ++ ++++ Y K + A+ +++ M+ +G P V+
Sbjct: 242 KLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVF 301
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
TYT L+ G G++++A + K+ + V + LI + + ALKL +M
Sbjct: 302 TYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKM 361
Query: 470 KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
+ PNV YN +I+++ A E M+ G+ + T A++
Sbjct: 362 DSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAIL 412
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 153/361 (42%), Gaps = 40/361 (11%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ C G ++Y ++KE+ E E + N LI F K + +VF
Sbjct: 262 NTLIDGYCKLGGNGKMYKADAVLKEMVENEVSP-NLTTFNILIDGFWKDDNLPGSLKVFK 320
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ D + N TY I L + A + +KM+ G P+ +I+ FCK G
Sbjct: 321 EMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNG 380
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
KEA LDM D G+ + + +
Sbjct: 381 MMKEA------------------------------------LDMFDSVKGQGTRPTTRMY 404
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+ +I + C++ + L +M EG P +N +I+ + G++ A ++ + +
Sbjct: 405 NMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTN 464
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
+GL PD+ T+ LM GY + G+ +A +L E K + +TY+ +++GYCK
Sbjct: 465 KGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKA 523
Query: 462 ALKLLNEM-KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
A + +M K+ ++ NV YN L+Q K A LL +M KGL N IT ++
Sbjct: 524 ATNMRTQMEKERRLRMNVASYNVLLQGYSQKG-KLEDANMLLNEMLEKGLVPNRITYEIV 582
Query: 521 R 521
+
Sbjct: 583 K 583
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 148/318 (46%), Gaps = 11/318 (3%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGC-VANQETYYFTIEALSRRKIFDWAWSVCEK 257
I + L+ ++ + + FE F + G YG ++ + L + + D + + ++
Sbjct: 155 IADMLVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEY-LYKE 213
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP-PQSVVAF--LISSLCQ 314
MI P+ +I+ CK GK +A V + K+Y +VV++ LI C+
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDV---MEDMKVYGYSPNVVSYNTLIDGYCK 270
Query: 315 EDETVKL--ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
K+ A +L + + F+ +I + ++ G+ + +M+ + P
Sbjct: 271 LGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPN 330
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+NS+I+ G + A+ M M S G++P++ TY L++G+ G M+EA ++ +
Sbjct: 331 VITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFD 390
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
K +R + Y+ LI YCKL + D L EM+ G+ P+V YN LI LC
Sbjct: 391 SVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNG 450
Query: 493 LDWRTAEKLLEDMRLKGL 510
+ A+KL + + KGL
Sbjct: 451 -NIEAAKKLFDQLTNKGL 467
>gi|255660834|gb|ACU25586.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 418
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 164/391 (41%), Gaps = 57/391 (14%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
L++ + S GK A++ + E ++ + + + LI + + G + A E +
Sbjct: 34 TLIQIVVSRKGKDSASAVFAAILETKGTQRS--DIYVFSGLITAYLESGFLRDAIECYRL 91
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
++ +T +E L + K F W ++++E G ++ FCK G+
Sbjct: 92 TREHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGE 151
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAF----------------------------------- 307
+ + V+ R+ + P SVV+F
Sbjct: 152 IRLSQSVFDAIRKWGLRP--SVVSFNTLMNGYIRQGDLDKGFRLKSAMHASGVQPDVYTY 209
Query: 308 --LISSLCQE---DETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAK 358
LI+ LC+E DE +L +MLD + P F+++I C+ V A
Sbjct: 210 SVLINGLCKESKMDEANELFXEMLDK--------GLVPNGVTFTTLIDGHCKNGKVDLAM 261
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+ +M+S+ P +N++I K GD+ A ++ M +GLKPD TYT L+ G
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGS 321
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G +E A E + + RL V Y LI G C+ A K+L EM VG++P+
Sbjct: 322 CKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDS 381
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
Y +I C K W T KLL++M+ G
Sbjct: 382 GTYTMIINEFCKKGDVW-TGSKLLKEMQRDG 411
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 135/280 (48%), Gaps = 4/280 (1%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSE--KVGKIISWFCKGGKAKEAHVVYTLAREK 296
I+ + RK D A +V ++ET S+ +I+ + + G ++A Y L RE
Sbjct: 36 IQIVVSRKGKDSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREH 95
Query: 297 KMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHG 356
K P ++ L + + KL + ++ F+ ++ C+ ++
Sbjct: 96 KFRVPFDTCRKVLEHL-MKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIRL 154
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
++++ + G P FN++++ Y + GD+ + M + G++PDVYTY+ L++
Sbjct: 155 SQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGFRLKSAMHASGVQPDVYTYSVLIN 214
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
G +M+EA E+ E + VT+ TLI G+CK + D A+++ +M + P
Sbjct: 215 GLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSP 274
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++ YN LI LC K D + A L+ +M +KGL + IT
Sbjct: 275 DLITYNTLIYGLCKKG-DLKQARNLINEMSMKGLKPDKIT 313
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 133/299 (44%), Gaps = 2/299 (0%)
Query: 180 LWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI 239
+W KEI E ++ N L+ F K G+ + + VF+ +G + ++ +
Sbjct: 120 VWGFYKEILECGYPA-SLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLM 178
Query: 240 EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
R+ D + + M +G PD +I+ CK K EA+ ++ +K +
Sbjct: 179 NGYIRQGDLDKGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLV 238
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P LI C+ + V LA+++ ++ + ++++I LC+ D+ A+
Sbjct: 239 PNGVTFTTLIDGHCKNGK-VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARN 297
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
L+++M +G P + ++I K GD+ A E K M ++ D YT L+SG
Sbjct: 298 LINEMSMKGLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLC 357
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G+ +A ++L E + TY +I +CK + KLL EM+ G P+V
Sbjct: 358 QEGRSVDAEKMLREMLSVGLKPDSGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSV 416
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 126/284 (44%), Gaps = 5/284 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ C + +++D +++ G + +V N L+ + + G F + +
Sbjct: 140 NILMHRFCKEGEIRLSQSVFDAIRKWGLRP----SVVSFNTLMNGYIRQGDLDKGFRLKS 195
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G + TY I L + D A + +M++ G +P+ +I CK G
Sbjct: 196 AMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNG 255
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
K A +Y + + P LI LC++ + +K A +++++ S + K +
Sbjct: 256 KVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD-LKQARNLINEMSMKGLKPDKITY 314
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+++I C+ D+ A +MI E + + ++IS + G A +ML+ M S
Sbjct: 315 TTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
GLKPD TYT +++ + G + ++L E +++ S VT
Sbjct: 375 VGLKPDSGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVT 418
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 143/314 (45%), Gaps = 3/314 (0%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEAL-SRRKIFDWAWSVCEK 257
IL+ L+ ++ K + VF K G + + + + L R D A V
Sbjct: 133 ILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNV 192
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M+E G P ++ FCK G +EA + + P L++ L E
Sbjct: 193 MVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGE 252
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
++ A +++ D + ++ + +IR C + A L +M+S G P +N
Sbjct: 253 -MEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYN 311
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+++ K G ++ A ++L +M ++ L PD+ +Y L+ GY G + EA + E +
Sbjct: 312 TIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYR 371
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
S VTY+TLI G C+L + D A++L +EM G P+V + ++ C K +
Sbjct: 372 SLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFC-KMGNLPM 430
Query: 498 AEKLLEDMRLKGLH 511
A++L ++M +GL
Sbjct: 431 AKELFDEMLNRGLQ 444
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 137/306 (44%), Gaps = 4/306 (1%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI +++LG AF +F + + TY I+ L R D A + ++MI+
Sbjct: 346 NTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIK 405
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQ-SVVAFLISSLCQEDETV 319
G PD + FCK G A ++ + + P + + + ++ L D +
Sbjct: 406 HGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSK 465
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
A M ++ + ++ I L ++ ++ A L+ KM+ G P + + S+
Sbjct: 466 --AFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSI 523
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I A+ AG + A + M S+G+ P V TYT L+ YA G+++ A E +
Sbjct: 524 IHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGV 583
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
+ +TY+ LI G CK+ + D A EM+ G+ PN Y LI C W+ A
Sbjct: 584 HPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENC-NLGHWQEAL 642
Query: 500 KLLEDM 505
+L +DM
Sbjct: 643 RLYKDM 648
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 182/420 (43%), Gaps = 17/420 (4%)
Query: 103 KLEN-VLSLLQSSVDGYLESSLDSFELDLHEDFVLKVLETPLVLGENLVCFFKWVTSGVV 161
K+EN V+ ++ SS E S+ S +L L D +L + +L + L+ F+K V+ G++
Sbjct: 111 KMENGVIDVVSSS-----EVSMPSVKLIL--DLLLWIYVKKSLLEKCLLVFYKMVSKGLL 163
Query: 162 DALLKAICSSVGK--KEVYALWDIVKEIGEK--EKGVL-TVEILNELIALFSKLGKGKAA 216
+ C+ V + ++ D+ +E+ E G+ TV N ++ F K G + A
Sbjct: 164 PDVKN--CNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEA 221
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
++ + GC N TY + LS + A + + M+ G +I
Sbjct: 222 LQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRG 281
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
+C+ G+ +EA + + P ++ LC+ V A +LD +
Sbjct: 282 YCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGR-VSDARKLLDVMVNKNLMP 340
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ ++++I R+ ++ A L +++ P +N++I + GD+ AM +
Sbjct: 341 DLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLK 400
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
M G PDV+T+T + G+ G + A E+ +E + Y T I G KL
Sbjct: 401 DEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKL 460
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ A + EM G P++ YN I L K + + A +L++ M GL + +T
Sbjct: 461 GDPSKAFGMQEEMLARGFPPDLITYNVFIDGLH-KLGNLKEASELVKKMLYNGLVPDHVT 519
>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
Length = 676
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 124/273 (45%), Gaps = 1/273 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V +I + K GK A + + + G N TY I+ R FD A+ +
Sbjct: 322 VHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMN 381
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
KM G LP+ II FCK GK ++A+ V +A + + P + LI+ C++
Sbjct: 382 KMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQG 441
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ ALD+ + + + I ++++I C+ + + ++ L K +S G P +
Sbjct: 442 H-ITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTY 500
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
S+I+ Y + G T A+++ + M G PD TY L+SG ++EEA +
Sbjct: 501 TSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLD 560
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
H VT TL YC+ ++ A+ L+ +
Sbjct: 561 KHMVPCDVTCVTLAYEYCRRDKTTIAVSFLDGL 593
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 112/259 (43%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
+ T + A R+ F + +M+E G+ P+ + CK G K+A V
Sbjct: 215 DSATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVL 274
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
K + P LI LC+ T + L + K + ++ +I C+
Sbjct: 275 EEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCK 334
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ A+ LL +M+ +G P + ++I + + G A E++ M+ G P++YT
Sbjct: 335 EGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYT 394
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
Y ++ G+ G++++A ++L A VTY LI +CK AL L N+M
Sbjct: 395 YNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMA 454
Query: 471 DVGVQPNVDEYNKLIQSLC 489
+ P++D Y +I C
Sbjct: 455 ENSCHPDIDTYTTIIAMYC 473
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 150/339 (44%), Gaps = 6/339 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
++ F + G+ + +F + + G N Y ++ L +R A+ V E+M+ G
Sbjct: 222 VVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKG 281
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVY-TLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
P+ +I CK G + A ++ L + P +I C+E + +
Sbjct: 282 LKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARA 341
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
+ +L + ++++I CR A L++KM EG P +N++I
Sbjct: 342 EM-LLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIG 400
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
+ K G + A ++L++ S+GL PD TYT L++ + G + A ++ N+ +N
Sbjct: 401 GFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHP 460
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
TY T+I YC+ + + + +L ++ +G+ P Y +I C + +A K+
Sbjct: 461 DIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYC-RVGKSTSALKV 519
Query: 502 LEDMRLKGLHLNGITR-ALIRAVKELEEDAIENGEALVE 539
E M G + IT ALI + +E +E AL E
Sbjct: 520 FERMVQHGCLPDPITYGALISGL--CKESRLEEARALFE 556
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 85/186 (45%), Gaps = 4/186 (2%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
++ +IA++ + + + + ++F+K G V ++TY I R A V E
Sbjct: 462 IDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFE 521
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M++ G LPD G +IS CK + +EA ++ +K M P L C+ D
Sbjct: 522 RMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEYCRRD 581
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+T +A+ LD + +A +++R L + ++ A L ++ + +A +
Sbjct: 582 KTT-IAVSFLDGLDKRQQAHAA---DALVRKLSAVDNLDAASLFLKNVLDKHYAVDHATY 637
Query: 377 NSVISA 382
S I++
Sbjct: 638 TSFINS 643
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 81/189 (42%), Gaps = 2/189 (1%)
Query: 329 FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD 388
F G + + F +++ C+ A LL+ M EG +A V+ A+ + G
Sbjct: 172 FDGMGVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGR 231
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHT 448
+ M G P+V YT + G G +++A +L E + + T+ +
Sbjct: 232 FRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTS 291
Query: 449 LIRGYCKLEEFDCALKL-LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRL 507
LI G CK+ + A +L L +K +PNV Y +I C + R AE LL M
Sbjct: 292 LIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLAR-AEMLLGRMVE 350
Query: 508 KGLHLNGIT 516
+GL N T
Sbjct: 351 QGLAPNTNT 359
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/202 (18%), Positives = 81/202 (40%), Gaps = 1/202 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I F K GK + A++V G ++ TY I ++ +A + +M E
Sbjct: 396 NAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAE 455
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
PD + II+ +C+ + +++ ++ + P + +I+ C+ ++
Sbjct: 456 NSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTS 515
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
AL + + + ++I LC+ + A+ L M+ + P + ++
Sbjct: 516 -ALKVFERMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLA 574
Query: 381 SAYSKAGDMTPAMEMLKLMRSR 402
Y + T A+ L + R
Sbjct: 575 YEYCRRDKTTIAVSFLDGLDKR 596
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 138/308 (44%), Gaps = 2/308 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI ++G + A + G N Y + +L +R D A + +M
Sbjct: 297 LICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANN 356
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD +I CK GK ++A +Y +++P + ++ LC E + A
Sbjct: 357 LQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLC-EKGMLSDA 415
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
D + + ++ +I ++ DV A L ++ + P FNS+I
Sbjct: 416 RMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYG 475
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ K + A +L+ ++ GL+P TYT LM+ Y G + + E+L E +
Sbjct: 476 FCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPT 535
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
VTY +I+G CK + + +++LL +M+ G+ P+ YN +IQ C KA D R A +LL
Sbjct: 536 VVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFC-KAKDMRKAFELL 594
Query: 503 EDMRLKGL 510
+DM + L
Sbjct: 595 DDMLIHNL 602
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 112/229 (48%), Gaps = 1/229 (0%)
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALD 324
P +I FCK K EA + + + P L+++ C+E KL +
Sbjct: 464 PSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLH-E 522
Query: 325 MLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
+L + + + + + ++ VI+ LC+ + + + LL M ++G P +N++I +
Sbjct: 523 LLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFC 582
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV 444
KA DM A E+L M L+P TY L+ G G +E+A +L + + L+ V
Sbjct: 583 KAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKV 642
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
Y T+I+ +C + A+K+ ++M + G + ++ +Y+ +I LC + L
Sbjct: 643 AYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCL 691
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 135/311 (43%), Gaps = 3/311 (0%)
Query: 207 FSKLGKGKAAFEVFNK-FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLP 265
F LG A E+ K D G + TY I + + A + ++ +G
Sbjct: 265 FHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQL 324
Query: 266 DSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDM 325
+ ++S CK G+ EA + + P + LI LC++ + V+ A+ +
Sbjct: 325 NVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGK-VQQAIQL 383
Query: 326 LDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSK 385
+ S +++ LC + A+ +I P ++N +I Y K
Sbjct: 384 YKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVK 443
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
GD+ A+ + K +R + + P + T+ L+ G+ ++ EA +L K + S VT
Sbjct: 444 LGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVT 503
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
Y TL+ YC+ + +LL EM ++P V Y +I+ LC K + +LLEDM
Sbjct: 504 YTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLC-KQRKLEESVQLLEDM 562
Query: 506 RLKGLHLNGIT 516
R KGL + IT
Sbjct: 563 RAKGLAPDQIT 573
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 121/250 (48%), Gaps = 18/250 (7%)
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKII-SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF 307
D W V + ++G+ P S + II C + ++A V++ + K + P SVV+F
Sbjct: 132 DIMWDVYNDIKDSGT-PQSARTSSIIVDGLCGQSRFRDA-VLFLRQNDGKEFAP-SVVSF 188
Query: 308 --LISSLCQEDETVKLAL-DMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTL 360
++S C KL L D+ F KY I P ++ +I L + A L
Sbjct: 189 NTIMSRYC------KLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALEL 242
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML-KLMRSRGLKPDVYTYTGLMSGYA 419
+ M +G P + V + G M+ A E++ K++ GLKPD+ TYT L+ G+
Sbjct: 243 TNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHC 302
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
G +EEA + + + +L+ + Y L+ CK + D AL+LL EM+ +QP++
Sbjct: 303 QMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLV 362
Query: 480 EYNKLIQSLC 489
Y+ LI LC
Sbjct: 363 TYSILIHGLC 372
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 136/318 (42%), Gaps = 3/318 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N +++ + KLG A F YG + + +Y I L + A + M
Sbjct: 188 FNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDME 247
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAH-VVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+ G PD + F G A ++ + ++ + P LI CQ
Sbjct: 248 KQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMG-N 306
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
++ AL + D + + +S ++ SLC+ V A LL +M + P ++
Sbjct: 307 IEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSI 366
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I K G + A+++ K M + P+ + ++G++ G G + +A + ++
Sbjct: 367 LIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSN 426
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
R Y+ +I GY KL + + A++L ++D + P++ +N LI C K A
Sbjct: 427 LRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFC-KNRKVVEA 485
Query: 499 EKLLEDMRLKGLHLNGIT 516
+LLE ++L GL + +T
Sbjct: 486 RRLLESIKLHGLEPSAVT 503
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 147/341 (43%), Gaps = 15/341 (4%)
Query: 205 ALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL 264
+L L ++V+N D G + T ++ L + F A +
Sbjct: 123 SLLYNLRHTDIMWDVYNDIKDSGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFA 182
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALD 324
P I+S +CK G A A + + + + P LI L +++ AL+
Sbjct: 183 PSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAG-SMEEALE 241
Query: 325 MLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS-EGPPPGNAVFNSVISAY 383
+ +D + + + + V + + + GA+ ++ KM++ EG P + +I +
Sbjct: 242 LTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGH 301
Query: 384 SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
+ G++ A+ + + + S G + +V Y+ L+S GQ++EA ++L E + N+ +
Sbjct: 302 CQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDL 361
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL--------DW 495
VTY LI G CK + A++L EM + PN ++ +++ LC K + D
Sbjct: 362 VTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDS 421
Query: 496 RTAEKLLEDMRLKGLHLNGITRA-----LIRAVKELEEDAI 531
L D+ L + ++G + +R K L + AI
Sbjct: 422 LIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAI 462
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 111/266 (41%), Gaps = 15/266 (5%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V + N +I + KLG + A ++ + D + T+ I + + A + E
Sbjct: 431 VTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLE 490
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE- 315
+ G P + +++ +C+ G + H + K + P +I LC++
Sbjct: 491 SIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQR 550
Query: 316 --DETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
+E+V+L DM R + P ++++I+ C+ KD+ A LL M+
Sbjct: 551 KLEESVQLLEDM--------RAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNL 602
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
P A +N +I + GD+ A +L ++ R + YT ++ + G + A +
Sbjct: 603 EPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVK 662
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCK 455
+ ++ + +S Y +I CK
Sbjct: 663 VFHQMVEKGFEVSIKDYSAVINRLCK 688
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 82/181 (45%), Gaps = 1/181 (0%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G +Q TY I+ + K A+ + + M+ P +I C+ G ++A
Sbjct: 566 GLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDA 625
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
V +++ + + +I + C + + + A+ + + + +IK +S+VI
Sbjct: 626 DRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQR-AVKVFHQMVEKGFEVSIKDYSAVIN 684
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
LC+ ++ AK M+S+G P +F +++A+ +AG + E+L +M GL
Sbjct: 685 RLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLLH 744
Query: 407 D 407
D
Sbjct: 745 D 745
>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 529
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 160/373 (42%), Gaps = 52/373 (13%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
L+ LI +S+LG+ +F VF G ++ T+ I+ L + A +K++
Sbjct: 50 LSILINCYSQLGQNALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVV 109
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
G + G +I+ CK G+ + A K + P + +I LC+ D+ V
Sbjct: 110 AQGFKLNQVSYGTLINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCK-DKLV 168
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
A ++ + + ++ ++++I LC M + A LL KMI E P F+ +
Sbjct: 169 NDAFNLYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSIL 228
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK--- 436
I A+ K G M A + +M +KP++ TY LM G+ +++A I N K
Sbjct: 229 IDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVD 288
Query: 437 -------------------------------------------NHSRLSP---VTYHTLI 450
H R P TY++L+
Sbjct: 289 EAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLL 348
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
CK D A++LL ++KD G+QP+V YN LI LC K+ + AEK+ ED+ +KG
Sbjct: 349 DALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLC-KSGRLKDAEKVFEDLLVKGY 407
Query: 511 HLNGIT-RALIRA 522
+ + T A+I+
Sbjct: 408 NTDVYTYNAMIKG 420
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 119/253 (47%), Gaps = 17/253 (6%)
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--- 307
A + KMI P +I FCK GK KEA V+ + ++ + P ++V +
Sbjct: 206 AIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKP--NIVTYNSL 263
Query: 308 -----LISSLCQEDETVKLALDMLD---DFSGEARKYAIKP----FSSVIRSLCRMKDVH 355
L++ + + + M+D + E I P ++S+I LC+
Sbjct: 264 MDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTP 323
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
A + +M G PP +NS++ A K + A+E+L ++ +G++P V TY L+
Sbjct: 324 YALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILI 383
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
+G G++++A ++ + TY+ +I+G+CK FD L ++++MKD G
Sbjct: 384 NGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCS 443
Query: 476 PNVDEYNKLIQSL 488
P+ +I+SL
Sbjct: 444 PDAKNCEIIIRSL 456
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 128/306 (41%), Gaps = 17/306 (5%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K+G+ +AA E + + Y I+ L + K+ + A+++ +M+
Sbjct: 123 LINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKR 182
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK-- 320
P +I C + K+A + + + P + LI + C+E + +
Sbjct: 183 ICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAK 242
Query: 321 --LALDMLDDFSGEARKY-----------AIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
A+ M +D Y +K S+ ++ +M D A L +M +
Sbjct: 243 NVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVD--EAMNLFEEMHFK 300
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
P ++NS+I K+G A++ + M RG PD++TY L+ +++A
Sbjct: 301 QIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKA 360
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
E+L + K + S TY+ LI G CK A K+ ++ G +V YN +I+
Sbjct: 361 IELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKG 420
Query: 488 LCLKAL 493
C K L
Sbjct: 421 FCKKGL 426
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 70/153 (45%)
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+I F ++ SL + +L +M G + +I+ YS+ G + +
Sbjct: 11 SIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFSVF 70
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
+ +G D T+T L+ G G++ +A ++ +L+ V+Y TLI G CK+
Sbjct: 71 ANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCKV 130
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ AL+ L + VQP+V YN +I LC
Sbjct: 131 GQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLC 163
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 3/143 (2%)
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
+ P P F ++ + KA + + + + M GL ++ T + L++ Y+ GQ
Sbjct: 6 KNPTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNAL 65
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
+ + K +T+ TLI+G C E AL +++ G + N Y LI
Sbjct: 66 SFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLIN 125
Query: 487 SLCLKALDWRTAEKLLEDMRLKG 509
LC K R A + L R+ G
Sbjct: 126 GLC-KVGQTRAALEFLR--RIDG 145
>gi|297812073|ref|XP_002873920.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319757|gb|EFH50179.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 483
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 151/327 (46%), Gaps = 5/327 (1%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+L + + S+ G + A EV+N + G ++ T + + + D W + ++M
Sbjct: 147 LLEQYVKCLSEEGLVEEAIEVYNVLKEMGISSSVVTCNSVLLGCLKARKLDRFWELHKEM 206
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
IE S D E++ +I C GG+ E + + ++ + P V A LIS C E E
Sbjct: 207 IE--SEFDLERIRCLIQALCDGGEVSEGYELLKQGLKQGLDPGHDVYAKLISGFC-EIEN 263
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
++L +I + +I+ LC K A + + +G P V+ +
Sbjct: 264 YACISEILHTMIAWNHFPSIYTYQRIIKGLCMNKKELEAYCIFKNLKEKGYAPDRVVYTT 323
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I + + G + A ++ M +G++P+ + Y +M G+ G++ NE +N
Sbjct: 324 MIHGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMMHGHFKRGEISLGEAFYNEMLRNG 383
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
+ ++ +T+IRG C + D A ++ +M + GV PN YN LI+ LC K
Sbjct: 384 YGETTLSCNTVIRGLCSHGKSDEAFEIFKKMSETGVTPNAITYNALIKGLC-KENKVEKG 442
Query: 499 EKLLEDMRLKGLHLNGITR-ALIRAVK 524
KL ++++ GL +G AL+R +K
Sbjct: 443 MKLYKELKALGLKPSGAAYAALVRNLK 469
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 105/279 (37%), Gaps = 18/279 (6%)
Query: 180 LWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI 239
W++ KE+ E E +E + LI G+ +E+ + G + Y I
Sbjct: 199 FWELHKEMIESE---FDLERIRCLIQALCDGGEVSEGYELLKQGLKQGLDPGHDVYAKLI 255
Query: 240 EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
+ + + MI P +II C K EA+ ++ +EK
Sbjct: 256 SGFCEIENYACISEILHTMIAWNHFPSIYTYQRIIKGLCMNKKELEAYCIFKNLKEKGYA 315
Query: 300 PPQSVVAFLISSLCQED---ETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMK 352
P + V +I C++ KL +M+ K ++P ++ ++ +
Sbjct: 316 PDRVVYTTMIHGFCEKGWLGSARKLWFEMI--------KKGMRPNEFAYNVMMHGHFKRG 367
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT 412
++ + ++M+ G N+VI G A E+ K M G+ P+ TY
Sbjct: 368 EISLGEAFYNEMLRNGYGETTLSCNTVIRGLCSHGKSDEAFEIFKKMSETGVTPNAITYN 427
Query: 413 GLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
L+ G ++E+ ++ E K + S Y L+R
Sbjct: 428 ALIKGLCKENKVEKGMKLYKELKALGLKPSGAAYAALVR 466
>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19440, chloroplastic; Flags: Precursor
Length = 838
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 142/327 (43%), Gaps = 5/327 (1%)
Query: 159 GVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFE 218
G++ L+ +C + LW G V+ N L+ + GK AF
Sbjct: 484 GLLTTLISGLCKHGKHSKALELWFQFLNKG----FVVDTRTSNALLHGLCEAGKLDEAFR 539
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+ + GCV ++ +Y I +K D A+ ++M++ G PD+ +I
Sbjct: 540 IQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLF 599
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
K +EA + + M P + +I C+ + T + + D+ + +
Sbjct: 600 NMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE-GQEFFDEMMSKNVQPNT 658
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
++ +IR+ CR + A L M +G P +A + S+I S + A + +
Sbjct: 659 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 718
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
MR GL+P+V+ YT L+ GY GQM + +L E + + +TY +I GY +
Sbjct: 719 MRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGN 778
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLI 485
A +LLNEM++ G+ P+ Y + I
Sbjct: 779 VTEASRLLNEMREKGIVPDSITYKEFI 805
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 138/322 (42%), Gaps = 8/322 (2%)
Query: 195 LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSV 254
LT N LI + K G+ A + + G NQ ++ I L +FD A
Sbjct: 411 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 470
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
+M+ P + +IS CK GK +A ++ K L+ LC+
Sbjct: 471 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCE 530
Query: 315 E---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
DE ++ ++L G ++++I C K + A L +M+ G P
Sbjct: 531 AGKLDEAFRIQKEIL----GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKP 586
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
N ++ +I + A++ + G+ PDVYTY+ ++ G + EE E
Sbjct: 587 DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF 646
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
+E + + + V Y+ LIR YC+ AL+L +MK G+ PN Y LI+ + +
Sbjct: 647 DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII 706
Query: 492 ALDWRTAEKLLEDMRLKGLHLN 513
+ A+ L E+MR++GL N
Sbjct: 707 S-RVEEAKLLFEEMRMEGLEPN 727
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 142/328 (43%), Gaps = 16/328 (4%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
V + N LI F + G A E+ + G TY I+ + D A +
Sbjct: 377 NVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL 436
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE-------KKMYPPQSVVAFL 308
++M+ G + +I C +H+++ A + M P ++ L
Sbjct: 437 KEMLSIGFNVNQGSFTSVICLLC-------SHLMFDSALRFVGEMLLRNMSPGGGLLTTL 489
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
IS LC+ + K AL++ F + + ++++ LC + A + +++ G
Sbjct: 490 ISGLCKHGKHSK-ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 548
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
+N++IS + A L M RGLKPD YTY+ L+ G N ++EEA
Sbjct: 549 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAI 608
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ ++ K+N TY +I G CK E + + +EM VQPN YN LI++
Sbjct: 609 QFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAY 668
Query: 489 CLKALDWRTAEKLLEDMRLKGLHLNGIT 516
C ++ A +L EDM+ KG+ N T
Sbjct: 669 C-RSGRLSMALELREDMKHKGISPNSAT 695
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 125/279 (44%), Gaps = 12/279 (4%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK--MIETGSLPDSEKVGKI 273
A +VF + G ++ T + +L R F CE ++ G PD
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQ---KCCEAFDVVCKGVSPDVYLFTTA 279
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSL--C-QEDETVKLALDMLDDFS 330
I+ FCKGGK +EA +++ E + P +I L C + DE M++
Sbjct: 280 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE--- 336
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
+ + +S +++ L R K + A +L +M +G PP V+N++I ++ +AG +
Sbjct: 337 -RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN 395
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A+E+ LM S+GL TY L+ GY GQ + A +L E ++ ++ ++I
Sbjct: 396 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 455
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
C FD AL+ + EM + P LI LC
Sbjct: 456 CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLC 494
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 135/328 (41%), Gaps = 38/328 (11%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V + I F K GK + A ++F+K + G N T+ I+ L +D A+ E
Sbjct: 273 VYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKE 332
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVV-AFLISSLCQE 315
KM+E G P ++ + + +A+ V KK +PP +V LI S E
Sbjct: 333 KMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLK-EMTKKGFPPNVIVYNNLIDSFI-E 390
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG------- 368
++ A+++ D + ++++I+ C+ A+ LL +M+S G
Sbjct: 391 AGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGS 450
Query: 369 ----------------------------PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
PG + ++IS K G + A+E+
Sbjct: 451 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL 510
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
++G D T L+ G G+++EA I E + V+Y+TLI G C ++ D
Sbjct: 511 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 570
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSL 488
A L+EM G++P+ Y+ LI L
Sbjct: 571 EAFMFLDEMVKRGLKPDNYTYSILICGL 598
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 146/302 (48%), Gaps = 5/302 (1%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
GCV N+ TY I L + D A S+ ++M+ + +P+ G +I+ K G++ +
Sbjct: 288 GCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDG 347
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
+ + E+ + + + LIS L +E+++ + A+ + + + I +S++I
Sbjct: 348 VHLLSSLEERGHHANEYAYSTLISGLFKEEKSEE-AMGLWKKMVEKGCQPNIVVYSALID 406
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
LCR + AK +L +M+++G P ++S+I + K G+ A+ + K M P
Sbjct: 407 GLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVP 466
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
+ Y+ L+ G G++ EA + R V Y ++I G C + LKL
Sbjct: 467 NEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLF 526
Query: 467 NEM--KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAV 523
NEM ++ QP+V YN L+++LC K A LL M +G + + IT + A+
Sbjct: 527 NEMLCQESDSQPDVVTYNILLRALC-KQNSISHAIDLLNSMLDRGCNPDLITCNIFLNAL 585
Query: 524 KE 525
+E
Sbjct: 586 RE 587
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 120/265 (45%), Gaps = 5/265 (1%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
GC + T+ I L ++ + + M G +P+ II+ C GK +A
Sbjct: 253 GCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKA 312
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA--LDMLDDFSGEARKYAIKPFSSV 344
+ K P LI+ L ++ +V L L++ A +YA +S++
Sbjct: 313 VSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYA---YSTL 369
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
I L + + A L KM+ +G P V++++I + G + A E+L M ++G
Sbjct: 370 ISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGC 429
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
P+ +TY+ L+ G+ G ++A + E KN+ + + Y LI G C+ + A+
Sbjct: 430 TPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMM 489
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLC 489
+ M G++P+V Y+ +I LC
Sbjct: 490 MWTHMLGRGLRPDVVAYSSMIHGLC 514
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 143/327 (43%), Gaps = 10/327 (3%)
Query: 197 VEILNELIALFSKLGKG---KAAFEVFNKFGD-YGCVANQETYYFTIEALSRRKIFDWAW 252
V I I +F GK + A E+F + D + C ++ + + + +F A
Sbjct: 112 VFIEKNFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRAL 171
Query: 253 SVCEKMI--ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
E + +T P+ +I CK G A V+ +K P L+
Sbjct: 172 EFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMD 231
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
LC+ED + A+ +LD+ E + F+ +I LC+ D+ L+ M +G
Sbjct: 232 GLCKEDR-IDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCV 290
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P +N++I+ G + A+ +L M + P+ TY L++G G+ + +
Sbjct: 291 PNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHL 350
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
L+ ++ + Y TLI G K E+ + A+ L +M + G QPN+ Y+ LI LC
Sbjct: 351 LSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCR 410
Query: 491 KA-LDWRTAEKLLEDMRLKGLHLNGIT 516
+ LD A+++L +M KG N T
Sbjct: 411 EGKLD--EAKEILCEMVNKGCTPNAFT 435
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 121/289 (41%), Gaps = 17/289 (5%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI+ K K + A ++ K + GC N Y I+ L R D A + +M+ G
Sbjct: 369 LISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKG 428
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P++ +I F K G +++A V+ + P + + LI LC ED ++ A
Sbjct: 429 CTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLC-EDGKLREA 487
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE--GPPPGNAVFNSVI 380
+ M G + + +SS+I LC V L ++M+ + P +N ++
Sbjct: 488 MMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILL 547
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
A K ++ A+++L M RG PD+ T ++ E LN +
Sbjct: 548 RALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALR---------EKLNPPQDGREF 598
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
L + ++R + K + A K++ M + PN + ++I LC
Sbjct: 599 LDEL----VVRLH-KRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELC 642
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 92/210 (43%), Gaps = 7/210 (3%)
Query: 175 KEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQET 234
+E LW + E G + + + + LI + GK A E+ + + GC N T
Sbjct: 380 EEAMGLWKKMVEKGCQP----NIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFT 435
Query: 235 YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR 294
Y I+ + A V ++M + +P+ +I C+ GK +EA +++T
Sbjct: 436 YSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHML 495
Query: 295 EKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEA--RKYAIKPFSSVIRSLCRMK 352
+ + P + +I LC +V++ L + ++ + + + ++ ++R+LC+
Sbjct: 496 GRGLRPDVVAYSSMIHGLCNAG-SVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQN 554
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+ A LL+ M+ G P N ++A
Sbjct: 555 SISHAIDLLNSMLDRGCNPDLITCNIFLNA 584
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 156/332 (46%), Gaps = 13/332 (3%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
++LL ++C + K+V+ + I + + V V + LI F K+ + A +++
Sbjct: 125 NSLLNSLCKA---KKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYK 181
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ D CV N TY + L R+ A V E+MI G PD +I F
Sbjct: 182 QMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLAR 241
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAI 338
K +AH ++ + P L+ LC+E DE +L M++ +
Sbjct: 242 KHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDK---- 297
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
+++++ C + + A + +M+S+G P +N ++ + +AG A ++ ++
Sbjct: 298 VTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQV 357
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKL 456
M SR KPD ++ ++ G + ++++A E+ +++H SP VTY++LI G C
Sbjct: 358 MVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHG-CSPDLVTYNSLIFGLCGE 416
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ A+K+ E+ + + P+ +N L++++
Sbjct: 417 QRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAM 448
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 119/262 (45%), Gaps = 10/262 (3%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
T + I+ L + D A S+ E MI+ G PD +I+ CK K +EA
Sbjct: 51 TCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM 110
Query: 294 REKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRS 347
S ++ L++SLC+ + V A + FS + ++ P +S +I
Sbjct: 111 NRTISTRASSCFSYNSLLNSLCKA-KKVHQAFAI---FSTMVSERSVVPDVVSYSILIDG 166
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
C++ ++ A+ L +MI P +N+ ++ + G + A + + M S G PD
Sbjct: 167 FCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPD 226
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
V TY+ L+ G++ + ++A E+ R + VTY+ L+ G CK + D A +L
Sbjct: 227 VITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFR 286
Query: 468 EMKDVGVQPNVDEYNKLIQSLC 489
+M + G P+ Y L+ C
Sbjct: 287 KMVERGCDPDKVTYTTLLYGFC 308
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 121/282 (42%), Gaps = 8/282 (2%)
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVG---KIISWFCKGGKAKEAHVVYTLAREKK 297
L + + A+ C M E+ S G +I CK G+ A + ++
Sbjct: 20 GLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSLLETMIKRG 79
Query: 298 MYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS--SVIRSLCRMKDVH 355
P + + LI+ LC+ D+ ++ A + L + A FS S++ SLC+ K VH
Sbjct: 80 YCPDMATHSMLINELCKADK-IQEAQEFLQGMNRTISTRASSCFSYNSLLNSLCKAKKVH 138
Query: 356 GAKTLLSKMISE-GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
A + S M+SE P ++ +I + K ++ A ++ K M P+V TY
Sbjct: 139 QAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAF 198
Query: 415 MSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV 474
++G G++ +A + E +TY TLI G+ + D A +L M G
Sbjct: 199 LNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGC 258
Query: 475 QPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+PN YN L+ LC K A +L M +G + +T
Sbjct: 259 RPNAVTYNCLLHGLC-KESKPDEAHELFRKMVERGCDPDKVT 299
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/284 (20%), Positives = 101/284 (35%), Gaps = 47/284 (16%)
Query: 184 VKEIGEKEK---------GVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQET 234
+ E+G EK V V N + + G+ A V+ + GC + T
Sbjct: 170 IDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVIT 229
Query: 235 YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR 294
Y I S + D A + E MI G P++ ++ CK K EAH ++
Sbjct: 230 YSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMV 289
Query: 295 EKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDV 354
E+ P + L+ C + ++ A+++ D+ + + ++ +++ R
Sbjct: 290 ERGCDPDKVTYTTLLYGFCNVGK-IEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKP 348
Query: 355 HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM-RSRG---------- 403
A+ L M+S P N +I SKA + A+E+ + M + G
Sbjct: 349 GEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNS 408
Query: 404 -------------------------LKPDVYTYTGLMSG-YANG 421
L PD + + L+ YA G
Sbjct: 409 LIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452
>gi|302801478|ref|XP_002982495.1| hypothetical protein SELMODRAFT_116601 [Selaginella moellendorffii]
gi|300149594|gb|EFJ16248.1| hypothetical protein SELMODRAFT_116601 [Selaginella moellendorffii]
Length = 448
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 124/271 (45%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI++ K + A +VF+ + V N + Y + A R + D A+ + +MI+ G
Sbjct: 155 LISVLCKHNRADDAMKVFDIMVEKEIVPNLDVYTSLLAAHCRTRKLDGAYRLFVEMIQRG 214
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P + G ++ C GG++ A+ +++ R + P ++ A LI C +
Sbjct: 215 YGPSASTYGLLLRCLCNGGRSYLAYDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAK 274
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+ + GE ++ +I LCR V A + + M+ +G P +N++I
Sbjct: 275 VLFKEVLEGEKALLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMG 334
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ KA ++ A+++ ++M +G P+ Y+ + G G++ EA E ++ +
Sbjct: 335 FFKANEVDKALQLFRVMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPD 394
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
VTY+ LIRG D A +L EM + G
Sbjct: 395 NVTYNALIRGLFGANRMDEAHRLYREMGERG 425
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 132/313 (42%), Gaps = 6/313 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
L+ F ++ + E+F + G Y ++AL FD + + + G
Sbjct: 51 LVDKFCEMKRVGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDG 110
Query: 263 SLPDSEKVGKIISWFCKGGKAKEA-HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
SLP ++ K GK +EA VV + KK P LIS LC+ +
Sbjct: 111 SLPHVLAYKTMLDCLIKTGKTREASEVVGEMI--KKSVPDGMTYTALISVLCKHNRADD- 167
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A+ + D + + ++S++ + CR + + GA L +MI G P + + ++
Sbjct: 168 AMKVFDIMVEKEIVPNLDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLR 227
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA-KKNHSR 440
G A ++ MRSRG PD TY L+ G G++ EA + E + +
Sbjct: 228 CLCNGGRSYLAYDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKAL 287
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
L Y+ LI G C+ + + AL++ M D G P + YN LI KA + A +
Sbjct: 288 LDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGF-FKANEVDKALQ 346
Query: 501 LLEDMRLKGLHLN 513
L M KG N
Sbjct: 347 LFRVMEEKGFSPN 359
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 122/302 (40%), Gaps = 13/302 (4%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G V ++++Y + L++ D A ++ M+ G PD G ++ FC+ + E
Sbjct: 5 GVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRVGEV 64
Query: 287 HVVYT-LAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVI 345
++ L + A L + +C D D G+ + + +++
Sbjct: 65 CELFQELESNGVAVGMLAYNAILKALMCSGD--FDGGFKFSDIAVGDGSLPHVLAYKTML 122
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
L + A ++ +MI + P G + ++IS K AM++ +M + +
Sbjct: 123 DCLIKTGKTREASEVVGEMIKKSVPDG-MTYTALISVLCKHNRADDAMKVFDIMVEKEIV 181
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
P++ YT L++ + +++ A + E + S TY L+R C A +
Sbjct: 182 PNLDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYDI 241
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCL-------KAL--DWRTAEKLLEDMRLKGLHLNGIT 516
+ M+ G P+ + Y LI C+ K L + EK L D + + + G+
Sbjct: 242 HSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKALLDAGIYNVLIEGLC 301
Query: 517 RA 518
RA
Sbjct: 302 RA 303
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/232 (18%), Positives = 94/232 (40%), Gaps = 2/232 (0%)
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M+E G +PD + ++ K +A + + + P L+ C E +
Sbjct: 1 MLEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFC-EMK 59
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
V ++ + + +++++++L D G + +G P +
Sbjct: 60 RVGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYK 119
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+++ K G A E++ M + + PD TYT L+S + ++A ++ + +
Sbjct: 120 TMLDCLIKTGKTREASEVVGEMIKKSV-PDGMTYTALISVLCKHNRADDAMKVFDIMVEK 178
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ Y +L+ +C+ + D A +L EM G P+ Y L++ LC
Sbjct: 179 EIVPNLDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLC 230
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 53/130 (40%)
Query: 183 IVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEAL 242
+ KE+ E EK +L I N LI + K + A EV D GC+ +TY I
Sbjct: 276 LFKEVLEGEKALLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGF 335
Query: 243 SRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQ 302
+ D A + M E G P++ I CK GK EAH + + E+ P
Sbjct: 336 FKANEVDKALQLFRVMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDN 395
Query: 303 SVVAFLISSL 312
LI L
Sbjct: 396 VTYNALIRGL 405
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 114/307 (37%), Gaps = 43/307 (14%)
Query: 137 KVLETPLVLGENLVCFFKWVTSGVV-DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVL 195
K E V+GE + K V G+ AL+ +C + ++DI+ E ++ V
Sbjct: 130 KTREASEVVGEMIK---KSVPDGMTYTALISVLCKHNRADDAMKVFDIMVE----KEIVP 182
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
+++ L+A + K A+ +F + G + TY + L A+ +
Sbjct: 183 NLDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYDIH 242
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE-KKMYPPQSVVAFLISSLCQ 314
M G +PD +I C G+ EA V++ E +K + LI LC+
Sbjct: 243 SSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKALLDAGIYNVLIEGLCR 302
Query: 315 E---DETVKLALDMLDD----------------FSGEARKYAIKPF-------------- 341
+E +++ M+D F A++ F
Sbjct: 303 ASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRVMEEKGFSPNTMI 362
Query: 342 -SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
S+ I LC++ ++ A + + G P N +N++I A M A + + M
Sbjct: 363 YSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHRLYREMG 422
Query: 401 SRGLKPD 407
RG D
Sbjct: 423 ERGYIAD 429
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 62/142 (43%), Gaps = 1/142 (0%)
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
M+ +G P +N ++ +K + A ML M G PDV T L+ + +
Sbjct: 1 MLEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKR 60
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
+ E CE+ E + N + + Y+ +++ +FD K + G P+V Y
Sbjct: 61 VGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKT 120
Query: 484 LIQSLCLKALDWRTAEKLLEDM 505
++ L +K R A +++ +M
Sbjct: 121 MLDCL-IKTGKTREASEVVGEM 141
>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 647
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 6/285 (2%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
+Y + AL R +SV M+ G P+ I+ FCK G+ + A + LA
Sbjct: 230 SYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAI--LA 287
Query: 294 REKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRM 351
R +VV F L+ L +D V ALDM E + ++ +IR LC +
Sbjct: 288 RMVITGCTPNVVTFTALVRGL-FDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSV 346
Query: 352 KDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTY 411
D+ GA ++L+ M G P ++++I +SKAGD+ A+ + M G KP+V Y
Sbjct: 347 GDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVY 406
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
T ++ + +A ++++ + + VT++TLIR C AL + +EM+
Sbjct: 407 TNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRR 466
Query: 472 VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
G PN YN+LI L + + A ++ +M+ G+ L+ +T
Sbjct: 467 HGCVPNGRTYNELIHGL-FREGNCGDALHMVTEMQSHGIELSLVT 510
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 146/327 (44%), Gaps = 8/327 (2%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
+ N LI + A V++ G N TY + AL + A + ++
Sbjct: 129 RLYNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDE 188
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M G PD I+S CK + EA V M P + ++ +LC+E
Sbjct: 189 MARKGCPPDDVTYATIVSVLCKLDRLDEATEVLA-----AMPPVAASYNAIVLALCREFR 243
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
++ ++ D G + + +++++ + C+ ++ A +L++M+ G P F
Sbjct: 244 -MQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFT 302
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+++ G + A++M + M + G P +Y L+ G + G ++ A ILN +++
Sbjct: 303 ALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQH 362
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
+ TY TLI G+ K + A+ + N+M G +PNV Y ++ C K L +
Sbjct: 363 GCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFC-KKLMFNQ 421
Query: 498 AEKLLEDMRLKGLHLNGIT-RALIRAV 523
A+ L++ M L+ N +T LIR++
Sbjct: 422 AKSLIDKMLLENCPPNTVTFNTLIRSL 448
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 158/366 (43%), Gaps = 16/366 (4%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+A++ A+C +EV+++ + G + + I++ F K G+ + A +
Sbjct: 232 NAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDA----FCKAGELRMACAILA 287
Query: 222 KFGDYGCVANQETYYFTIEAL-SRRKIFD----WAWSVCEKMIETGSLPDSEKVGKIISW 276
+ GC N T+ + L ++ D W W M+ G P + +I
Sbjct: 288 RMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRW-----MVAEGWAPSTVSYNILIRG 342
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
C G K A + + +P + LI + + + A+ + +D S K
Sbjct: 343 LCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGD-LGGAISIWNDMSRSGCKP 401
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ +++++ C+ + AK+L+ KM+ E PP FN++I + + A+ +
Sbjct: 402 NVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVF 461
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
MR G P+ TY L+ G G +A ++ E + + LS VTY+T++ G C+
Sbjct: 462 HEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQT 521
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A+ + +M G+QPN ++ +I + C K + R A +L M + H N +
Sbjct: 522 RMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYC-KEGEVRMAAWMLGAMNVVNCHRNILV 580
Query: 517 RALIRA 522
++ A
Sbjct: 581 YTILMA 586
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 11/196 (5%)
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
G AR + ++ +I +L R V + M +G P +N ++ A + +
Sbjct: 121 GCARPTEPRLYNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVG 180
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV--TYHT 448
A +ML M +G PD TY ++S +++EA E+L + + PV +Y+
Sbjct: 181 AARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVL-------AAMPPVAASYNA 233
Query: 449 LIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLK 508
++ C+ ++++M G+QPNV Y ++ + C KA + R A +L M +
Sbjct: 234 IVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFC-KAGELRMACAILARMVIT 292
Query: 509 GLHLNGIT-RALIRAV 523
G N +T AL+R +
Sbjct: 293 GCTPNVVTFTALVRGL 308
>gi|449433055|ref|XP_004134313.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Cucumis sativus]
Length = 602
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 162/365 (44%), Gaps = 14/365 (3%)
Query: 161 VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVF 220
++ ++ +C +E +D++KE G + VE N K G+ ++++
Sbjct: 158 LENYIRCVCEGGLVEEAVYTFDMLKEAGYRP----YVETWNFAFQSCLKFGRTDLIWKLY 213
Query: 221 NKFGDYGCV--ANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+ G + ET + I+A A+ + + +E G P ++ K+IS FC
Sbjct: 214 EGMMETGVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFC 273
Query: 279 KGGKAKEAHVVYTLARE---KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
K K H V L K P +I+ C+ T++ A ++ +
Sbjct: 274 K---EKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQ-AFEVFNALKDRGYA 329
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+ ++++I C+M + A L +MI +G P +N++I + K G++ AM++
Sbjct: 330 PDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKL 389
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
K M G K + L+ G G+ +EA + E + +TY+TLI+G+C+
Sbjct: 390 YKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCR 449
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
+ + LL E++ G+QP+ Y LIQ LC + + A+++ DM +GL
Sbjct: 450 EGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLC-QLGSVQEAKEMWNDMHNRGLQPMVC 508
Query: 516 TRALI 520
TR I
Sbjct: 509 TRDHI 513
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 5/228 (2%)
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISS---LCQEDETVKL 321
P+ + I C+GG +EA + + +E P F S + D KL
Sbjct: 153 PEPASLENYIRCVCEGGLVEEAVYTFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIWKL 212
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
M++ +G + I+ +I++ C V A +L + + +G P N FN +IS
Sbjct: 213 YEGMME--TGVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLIS 270
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
+ K + +E++ M + PD++TY +++G+ +A E+ N K
Sbjct: 271 GFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAP 330
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
V Y TLI G+CK+ + + A KL EM D G PN YN LI C
Sbjct: 331 DMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFC 378
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 160/369 (43%), Gaps = 20/369 (5%)
Query: 169 CSSVGKKEVYALWDIVKEIGEKEKGV---LTVEILNELIALFSKLGKGKAAFEVFNKFGD 225
C G+ ++ +W + + G E GV + +E + LI F K A+E+ + +
Sbjct: 200 CLKFGRTDL--IWKLYE--GMMETGVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLE 255
Query: 226 YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKE 285
G + + I + K + MI PD +II+ FCK +
Sbjct: 256 DGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQ 315
Query: 286 AHVVYTLAREKKMYPPQSVVAFLISSLC---QEDETVKLALDMLDDFSGEARKYAIKPFS 342
A V+ +++ P + LI C Q ++ KL +M+D +Y+ ++
Sbjct: 316 AFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDK-GFLPNEYS---YN 371
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
++I C++ ++ A L KM+ G N++I G A + + M +
Sbjct: 372 TLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCK 431
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
+ DV TY L+ G+ G++ ++ ++L E + + S +Y LI+ C+L A
Sbjct: 432 NIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEA 491
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLC-----LKALDWRTAEKLLEDMRLKGLHLNGITR 517
++ N+M + G+QP V + +I LC ++ ++W L +++ + + +
Sbjct: 492 KEMWNDMHNRGLQPMVCTRDHIISGLCEQGYVVEGMEWLIT-MLKSNLKPQKETFYKLIQ 550
Query: 518 ALIRAVKEL 526
+LI+ KEL
Sbjct: 551 SLIQIGKEL 559
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 123/292 (42%), Gaps = 6/292 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKG--VLTVEILNELIALFSKLGKGKAAFEV 219
DA K I +K + + ++V + K + + T + E+I F K AFEV
Sbjct: 263 DAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIFTYQ---EIINGFCKNWMTLQAFEV 319
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
FN D G + Y I + + A + +MI+ G LP+ +I FCK
Sbjct: 320 FNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCK 379
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
G EA +Y + LI LC T + A D + + +
Sbjct: 380 IGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDE-AYDFFREMPCKNIVCDVI 438
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
++++I+ CR V + LL ++ ++G P + + +I + G + A EM M
Sbjct: 439 TYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDM 498
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
+RGL+P V T ++SG G + E E L K++ + T++ LI+
Sbjct: 499 HNRGLQPMVCTRDHIISGLCEQGYVVEGMEWLITMLKSNLKPQKETFYKLIQ 550
>gi|225454807|ref|XP_002274300.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Vitis vinifera]
Length = 457
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 149/310 (48%), Gaps = 2/310 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L++ +S+ AA+ V ++ + G + TY I A ++R + + + E+M+
Sbjct: 46 NTLLSAYSRFVGIDAAYSVIHRMKEAGISPDVITYNSLIAAATKRCLLSRSLDLFEEMLR 105
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
TG PD ++ F K GK EA+ V+ + P S +I+ LC T
Sbjct: 106 TGIRPDVWSYNSLMHCFFKLGKPDEANRVFQDIILTNLLPSSSTFNIMINGLCNNGYT-G 164
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
AL + + + ++ +I LC+ + ++ A+ +L ++ G P + +V+
Sbjct: 165 YALSLYRYLQRQGFVPELVTYNILINGLCKSRKLNAARRILRELGESGNVPDAITYTTVM 224
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
++ E+ M+S+G D ++Y +++ G++EEA +I+ + ++
Sbjct: 225 KCCFRSRQFEQGFEIFSEMKSKGYAFDAFSYCAVIAALTKTGRLEEANDIMEQMARSDID 284
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
L V+Y+T++ YC+ + + KLL+E+++ G++ + + LI LC KA + A +
Sbjct: 285 LDIVSYNTVMNLYCRNGKLEATYKLLDEIEEHGLECDEYTHTILIDGLC-KAGNVEGALR 343
Query: 501 LLEDMRLKGL 510
L++M G
Sbjct: 344 HLKNMTKMGF 353
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 84/168 (50%), Gaps = 1/168 (0%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+ +++++ + R + A +++ +M G P +NS+I+A +K ++ ++++ +
Sbjct: 42 VVTYNTLLSAYSRFVGIDAAYSVIHRMKEAGISPDVITYNSLIAAATKRCLLSRSLDLFE 101
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M G++PDV++Y LM + G+ +EA + + + S T++ +I G C
Sbjct: 102 EMLRTGIRPDVWSYNSLMHCFFKLGKPDEANRVFQDIILTNLLPSSSTFNIMINGLCNNG 161
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
AL L ++ G P + YN LI LC K+ A ++L ++
Sbjct: 162 YTGYALSLYRYLQRQGFVPELVTYNILINGLC-KSRKLNAARRILREL 208
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 77/155 (49%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
+++ K + I SLC++ + A+ ++ I G P +N+++SAYS+ + A
Sbjct: 4 RFSTKLLNICIASLCKVGQLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGIDAAYS 63
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
++ M+ G+ PDV TY L++ + + ++ E + R +Y++L+ +
Sbjct: 64 VIHRMKEAGISPDVITYNSLIAAATKRCLLSRSLDLFEEMLRTGIRPDVWSYNSLMHCFF 123
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
KL + D A ++ ++ + P+ +N +I LC
Sbjct: 124 KLGKPDEANRVFQDIILTNLLPSSSTFNIMINGLC 158
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 62/327 (18%), Positives = 118/327 (36%), Gaps = 46/327 (14%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+ F KLGK A VF + + T+ I L +A S+ +
Sbjct: 116 NSLMHCFFKLGKPDEANRVFQDIILTNLLPSSSTFNIMINGLCNNGYTGYALSLYRYLQR 175
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAH-VVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
G +P+ +I+ CK K A ++ L + P ++ + C
Sbjct: 176 QGFVPELVTYNILINGLCKSRKLNAARRILRELGESGNV--PDAITYTTVMKCCFRSRQF 233
Query: 320 KLALDMLDDFSGEARKYAIKPFS--SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
+ ++ + +++ YA FS +VI +L + + A ++ +M +N
Sbjct: 234 EQGFEIFSEM--KSKGYAFDAFSYCAVIAALTKTGRLEEANDIMEQMARSDIDLDIVSYN 291
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG--------------- 422
+V++ Y + G + ++L + GL+ D YT+T L+ G G
Sbjct: 292 TVMNLYCRNGKLEATYKLLDEIEEHGLECDEYTHTILIDGLCKAGNVEGALRHLKNMTKM 351
Query: 423 --------------------QMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
Q++ A ++ + S TY +++ CK + A
Sbjct: 352 GFDSTLVAQNCVIDGLCKVGQLDHAIKMFASMEVKDS----FTYSSMVHNLCKARRYRHA 407
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+LL G++ +I LC
Sbjct: 408 SRLLLACLRGGMKILRANQRSVIDGLC 434
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 134/284 (47%), Gaps = 2/284 (0%)
Query: 226 YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKE 285
+GC + +Y + L + + + E+M+ G P+ +I C+ G +
Sbjct: 211 FGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFER 270
Query: 286 AHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVI 345
H V+ E P + A +I +C+E E +++A +L+ + +++++
Sbjct: 271 VHEVHAQMAEHGCAPDVRMYATIIDGVCKE-ERLEVARGILNRMPSYGLSPNVVCYNTLL 329
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
+ LC A+ LL++M + P + FN ++ + G + +E+L+ M G
Sbjct: 330 KGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCM 389
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
PDV TYT +++G+ G ++EA +L R + V+Y +++G C E + A +L
Sbjct: 390 PDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEEL 449
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
+++M G PN +N LI LC K L + E LL+ M + G
Sbjct: 450 MSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE-LLKQMLVNG 492
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 128/285 (44%), Gaps = 2/285 (0%)
Query: 225 DYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAK 284
D C + T+ ++ L + + D V E+M+E G +PD +I+ FCK G
Sbjct: 350 DKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLID 409
Query: 285 EAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSV 344
EA ++ P ++ LC + V A +++ + F+++
Sbjct: 410 EAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVD-AEELMSQMIQQGCPPNPVTFNTL 468
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
I LC+ V A LL +M+ G P +++VI KAG+ A+E+L +M +G+
Sbjct: 469 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGM 528
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
P+ Y+ + S + G++ + ++ + R V Y+ +I CK E D A++
Sbjct: 529 SPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIE 588
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
L M G PN Y LI+ L + + A+++L ++ KG
Sbjct: 589 FLAYMVSSGCVPNESTYTILIRGLASEGF-VKEAQEILTELCSKG 632
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 110/258 (42%), Gaps = 4/258 (1%)
Query: 179 ALWDIVKEIGEK--EKGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETY 235
L D V E+ E+ E G + V +I F K G A + GC N +Y
Sbjct: 371 GLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSY 430
Query: 236 YFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE 295
++ L + + A + +MI+ G P+ +I++ CK G ++A +
Sbjct: 431 TIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLV 490
Query: 296 KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVH 355
P + +I L + T + AL++L+ + +SS+ +L ++
Sbjct: 491 NGCSPDLISYSTVIDGLGKAGNTDE-ALELLNVMVKKGMSPNTIIYSSIASALSGEGRIN 549
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
+ + ++N+VIS+ K G+ A+E L M S G P+ TYT L+
Sbjct: 550 KVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILI 609
Query: 416 SGYANGGQMEEACEILNE 433
G A+ G ++EA EIL E
Sbjct: 610 RGLASEGFVKEAQEILTE 627
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 84/188 (44%), Gaps = 1/188 (0%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A E+ ++ GC N T+ I L ++ + + A + ++M+ G PD +I
Sbjct: 446 AEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVID 505
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
K G EA + + +K M P + + + S+L E K+ + M ++ +
Sbjct: 506 GLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKV-IQMFENIQDTTVR 564
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+++VI SLC+ + A L+ M+S G P + + +I + G + A E+
Sbjct: 565 SDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEI 624
Query: 396 LKLMRSRG 403
L + S+G
Sbjct: 625 LTELCSKG 632
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 71/161 (44%), Gaps = 3/161 (1%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+ ++R+LC + A +L M G P +++ + A +A A+ +L+ +
Sbjct: 114 YFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLH 173
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEE 458
RG DV ++ + G ++EA +L + + P V+Y+ ++RG C
Sbjct: 174 GRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFG-CEPDVVSYNAVLRGLCMARR 232
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
+ L+ EM G PN+ ++ LI LC L R E
Sbjct: 233 WGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHE 273
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 63/130 (48%), Gaps = 4/130 (3%)
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N++++ Y +AG + +L S + P+ YTY L+ G++ +A +L++
Sbjct: 82 YNAMVAGYCRAGQLA---AARRLAASVPVAPNAYTYFPLVRALCARGRIADALAVLDDMA 138
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+ +P YH + C+ F A+ +L ++ G +V N ++Q++C +
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQG-PV 197
Query: 496 RTAEKLLEDM 505
A +LL D+
Sbjct: 198 DEAVRLLRDL 207
>gi|293332227|ref|NP_001169164.1| uncharacterized protein LOC100383014 [Zea mays]
gi|223975267|gb|ACN31821.1| unknown [Zea mays]
Length = 469
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 146/353 (41%), Gaps = 70/353 (19%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC-------- 278
GC + TY + + RR I D A + ++M G P+ ++ FC
Sbjct: 5 GCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEA 64
Query: 279 ---------KGGKAKEA------HVVYTLAREKKMY----------PPQSVVAF--LISS 311
KG A EA H + +++ Y P +A+ L+
Sbjct: 65 VCVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYC 124
Query: 312 LCQED---ETVKLA-------------------------------LDMLDDFSGEARKYA 337
L + D E V+LA +++DDF +
Sbjct: 125 LSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLG 184
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+ +I+S R KD+ A S+M+S+G +N VI ++KAG++ A+E +K
Sbjct: 185 FDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIK 244
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
+M+ G P++ T+ L++GY G + +A L ++ +T+ +LI G C
Sbjct: 245 VMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTH 304
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+ D A +EM + GV+PNV YN LI LC A A +LL M++ G+
Sbjct: 305 QLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLC-SAGHVSKAIELLNKMKMDGI 356
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 106/242 (43%), Gaps = 1/242 (0%)
Query: 190 KEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
K+ G L ++ +I F + A + F++ G +++ E+Y I+ ++ +
Sbjct: 178 KKGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVE 237
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A + M E+G P+ +I+ + K G +A + E + P LI
Sbjct: 238 RALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLI 297
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
LC + + A + + S + ++ ++ +I LC V A LL+KM +G
Sbjct: 298 DGLCHTHQ-LDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGI 356
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
P FN+ I ++ + + A ++ M G+ PD YTY L+ + +++EA E
Sbjct: 357 TPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKE 416
Query: 430 IL 431
I+
Sbjct: 417 II 418
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 106/262 (40%), Gaps = 15/262 (5%)
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
E+ + F G + Y I++ R K A +M+ G L E +I F
Sbjct: 171 ELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCF 230
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDD---FSGEAR 334
K G+ + A + +E P LI+ L L + D F
Sbjct: 231 AKAGEVERALETIKVMQESGFSPNLVTFNTLINGY--------LKLGNVHDAKAFLKMVM 282
Query: 335 KYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
++ + P F+S+I LC + A S+M G P +N +I AG ++
Sbjct: 283 EHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVS 342
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A+E+L M+ G+ PD Y++ + + ++E+A ++ N+ + TY+ LI
Sbjct: 343 KAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALI 402
Query: 451 RGYCKLEEFDCALKLLNEMKDV 472
+ C D A +++ M+ +
Sbjct: 403 KALCDERRVDEAKEIILAMESI 424
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 85/166 (51%), Gaps = 3/166 (1%)
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
M ++G P +N+++ + G + A+ ++K M G++P+V TYT L+ G+ N +
Sbjct: 1 MPADGCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASR 60
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
+EEA +L K+ + TY +L+ G + E + A ++L+E + + Y+
Sbjct: 61 VEEAVCVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHT 120
Query: 484 LIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIR--AVKELE 527
L+ L +D + A +L + M +G L T +++ AVK LE
Sbjct: 121 LLYCLSKNDMD-KEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLE 165
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 3/113 (2%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
AF F++ ++G N +TY I L A + KM G PD+ I
Sbjct: 309 AFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPIL 368
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDM 325
FC+ K ++A ++ + P LI +LC E DE ++ L M
Sbjct: 369 SFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILAM 421
>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 156/354 (44%), Gaps = 10/354 (2%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
V +L++ C AL+D V E G+ + N LI F KLG+ K A E+
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAI----TYNTLIRGFCKLGQLKEASEI 304
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
F + G N TY I+ L A + MIE P++ II+ CK
Sbjct: 305 FEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCK 364
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKY 336
G +A + L ++++ P L+ LC + DE KL ML D S
Sbjct: 365 DGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSS--YTDP 422
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ ++++I LC+ +H A + ++ + N ++++ KAGD+ AME+
Sbjct: 423 DVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELW 482
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
K + + + TYT ++ G+ G + A +L + + + + S Y+ L+ CK
Sbjct: 483 KQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKE 542
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
D A +L EM+ P+V +N +I LKA D ++AE LL M GL
Sbjct: 543 GSLDQAWRLFEEMQRDNNFPDVVSFNIMIDG-SLKAGDIKSAESLLVGMSRAGL 595
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 141/306 (46%), Gaps = 8/306 (2%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
L+ L+ + ++ K AF V G N + ++ L R A S+ +M
Sbjct: 110 LSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMR 169
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQ-SVVAF--LISSLCQED 316
+PD +I FC+G KE LA E K S+V + LI + C+
Sbjct: 170 RNSLMPDVFSYNTVIRGFCEG---KELEKALELANEMKGSGCSWSLVTWGILIDAFCKAG 226
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ + A+ L + + + ++S+IR C ++ K L +++ G P +
Sbjct: 227 KMDE-AMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N++I + K G + A E+ + M RG++P+VYTYTGL+ G G+ +EA ++LN +
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIE 345
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ VTY+ +I CK A++++ MK +P+ YN L+ LC K D
Sbjct: 346 KDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKG-DLD 404
Query: 497 TAEKLL 502
A KLL
Sbjct: 405 EASKLL 410
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 123/252 (48%), Gaps = 9/252 (3%)
Query: 242 LSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPP 301
L R + + A+S KM+ET + + + ++ + + K A V L ++
Sbjct: 82 LVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFN 141
Query: 302 QSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGA 357
L+ LC+ E K A+ +L E R+ ++ P +++VIR C K++ A
Sbjct: 142 VYNHNILLKGLCRNLECGK-AVSLLR----EMRRNSLMPDVFSYNTVIRGFCEGKELEKA 196
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
L ++M G + +I A+ KAG M AM LK M+ GL+ D+ YT L+ G
Sbjct: 197 LELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRG 256
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
+ + G+++ + +E + +TY+TLIRG+CKL + A ++ M + GV+PN
Sbjct: 257 FCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPN 316
Query: 478 VDEYNKLIQSLC 489
V Y LI LC
Sbjct: 317 VYTYTGLIDGLC 328
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 108/506 (21%), Positives = 197/506 (38%), Gaps = 81/506 (16%)
Query: 79 YAQMDPSADAVESKEEEAYEIDGDKLENVLSLLQSSVD----------GYLESSLDSFEL 128
Y+++ + E+K E +L+N +S+ Q +VD + + S
Sbjct: 29 YSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSLAFAGNNLMAKLVRSRNH 88
Query: 129 DLHEDFVLKVLETP-----LVLGENLVCFFKWVTSGVV-------------------DAL 164
+L F K+LET + L L C+ + +G + L
Sbjct: 89 ELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNIL 148
Query: 165 LKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEIL--NELIALFSKLGKGKAAFEVFNK 222
LK +C ++ + +L + E + L ++ N +I F + + + A E+ N+
Sbjct: 149 LKGLCRNLECGKAVSL------LREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANE 202
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
GC + T+ I+A + D A ++M G D +I FC G+
Sbjct: 203 MKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGE 262
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
++ E+ P LI C+ + +K A ++ + + + ++
Sbjct: 263 LDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQ-LKEASEIFEFMIERGVRPNVYTYT 321
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+I LC + A LL+ MI + P +N +I+ K G + A+E+++LM+ R
Sbjct: 322 GLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKR 381
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCK----- 455
+PD TY L+ G G ++EA ++L K+ S P ++Y+ LI G CK
Sbjct: 382 RTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLH 441
Query: 456 --LEEFDC----------------------------ALKLLNEMKDVGVQPNVDEYNKLI 485
L+ +D A++L ++ D + N D Y +I
Sbjct: 442 QALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMI 501
Query: 486 QSLCLKALDWRTAEKLLEDMRLKGLH 511
C + A+ LL MR+ L
Sbjct: 502 DGFCKTGM-LNVAKGLLCKMRVSELQ 526
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 121/316 (38%), Gaps = 46/316 (14%)
Query: 155 WVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGK 214
+ +G++D L C KE L +++ E E+ V I+N+L K G
Sbjct: 318 YTYTGLIDGL----CGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKL----CKDGLVA 369
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL--PDSEKVGK 272
A E+ + TY + L + D A + M++ S PD
Sbjct: 370 DAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNA 429
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
+I CK + +A +Y L EK + L++S + + K A+++ S
Sbjct: 430 LIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNK-AMELWKQISDS 488
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM-ISEGPP--------------------- 370
++++I C+ ++ AK LL KM +SE P
Sbjct: 489 KIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQA 548
Query: 371 -------------PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
P FN +I KAGD+ A +L M GL PD++TY+ L++
Sbjct: 549 WRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINR 608
Query: 418 YANGGQMEEACEILNE 433
+ G ++EA ++
Sbjct: 609 FLKLGYLDEAISFFDK 624
>gi|326513918|dbj|BAJ92109.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 459
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 156/408 (38%), Gaps = 56/408 (13%)
Query: 116 DGYLESSLDSFELD--LHEDFVLKVLET-----PLVLGENLVCFFKWVT-----SGVVDA 163
D YLE +L+ L D L+V+ PL + F W+ S D
Sbjct: 59 DFYLERTLNRLRLPSPFPPDLALRVIRAAAPSEPL----HAARFLAWIRAKPNFSPSADH 114
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGV-LTVEILNELIALFSKLGKGKAAFEVFNK 222
+ + LW ++ + G+ L+ + +I+ + + A EVFN+
Sbjct: 115 FDALLLPLARARLFTHLWTQASDM--RALGLPLSPATFSAVISSYGHSRLAEQAVEVFNR 172
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+GC E Y ++AL F A+ + +M G PD ++ +C GK
Sbjct: 173 LPHFGCPQTTEVYNALLDALCANGNFAGAYKLLRRMARKGVAPDRATFSTLVDAWCASGK 232
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+EA LDD + + ++
Sbjct: 233 LREAQA------------------------------------FLDDMATRGFRPPVRGRD 256
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
++ L R + AK ++ EG P A FNS+ A AGD+ A+ +L SR
Sbjct: 257 LLVDGLVRAGRLEEAKAFALRITKEGVLPDVATFNSLAQALCDAGDVEFAVGLLADASSR 316
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G+ PD+ TY ++ A G++EEA + A ++ R P Y +++ CK F A
Sbjct: 317 GMCPDISTYKVMLPAVAKAGRIEEAFRLFYAAIEDGHRPFPSLYAAIVKALCKAGRFADA 376
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+MK G PN Y L++ +C++ + A L +M G
Sbjct: 377 FAFFGDMKSKGHPPNRPVYVMLVK-MCVRGGRFLDAANYLLEMSEAGF 423
>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
Length = 676
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 115/266 (43%), Gaps = 6/266 (2%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G + T + A R+ F + +M E G+ P+ I C+ G K+A
Sbjct: 211 GFCLDSATCTVVVRAFCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQA 270
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQ---EDETVKLALDMLDDFSGEARKYAIKPFSS 343
V K + P LI LC+ + +L L ++ S K + ++
Sbjct: 271 FHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSS---YKPNVHTYTV 327
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
+I C+ + A+ LL +M+ +G P + ++I + K G A E++ M+ G
Sbjct: 328 MIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEG 387
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
P++YTY ++ G+ G+++EA ++L A L VTY LI +CK CAL
Sbjct: 388 FLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCAL 447
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLC 489
L +M + P++ Y +I C
Sbjct: 448 DLFKQMAEKSCHPDIHTYTTIIAMYC 473
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 123/273 (45%), Gaps = 1/273 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V +I + K GK A + + + G N TY I + FD A+ +
Sbjct: 322 VHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMN 381
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
KM G LP+ II FCK GK +EA+ V +A + ++ + LI+ C++
Sbjct: 382 KMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQG 441
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ ALD+ + ++ I ++++I C+ + + ++ L K +S G P +
Sbjct: 442 H-ITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTY 500
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
S+I+ Y + G +T A+++ + M G PD TY L+S ++EEA +
Sbjct: 501 TSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLD 560
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
H VT TL YC+ ++ A+ L+ +
Sbjct: 561 KHLVPCDVTRVTLAYEYCRRDKITIAVSFLDRL 593
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 120/260 (46%), Gaps = 3/260 (1%)
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
G PD ++ C+ G+ +EA + + + ++ + C++ +
Sbjct: 176 GVRPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGR-FRN 234
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
D+ S + +S+ I LC V A +L +M+ +G P S+I
Sbjct: 235 VTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLID 294
Query: 382 AYSKAGDMTPAMEM-LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
K G M A + LKL++S KP+V+TYT ++ GY G++ A +L +
Sbjct: 295 GLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLA 354
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+ TY TLI G+CK FD A +L+N+MK G PN+ YN +I C K + A K
Sbjct: 355 PNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKG-KIQEAYK 413
Query: 501 LLEDMRLKGLHLNGITRALI 520
+L +GLHL+ +T ++
Sbjct: 414 VLRMATSQGLHLDKVTYTIL 433
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 148/339 (43%), Gaps = 6/339 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
++ F + G+ + ++F + + G N Y I+ L R A+ V E+M+ G
Sbjct: 222 VVRAFCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKG 281
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVY-TLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
P+ +I CK G + A ++ L + P +I C+E + +
Sbjct: 282 LKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARA 341
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
+ +L + ++++I C+ A L++KM EG P +N++I
Sbjct: 342 EM-LLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIG 400
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
+ K G + A ++L++ S+GL D TYT L++ + G + A ++ + +
Sbjct: 401 GFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHP 460
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
TY T+I YC+ + + + +L ++ +G+ P Y +I C + +A K+
Sbjct: 461 DIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYC-RLGKLTSALKV 519
Query: 502 LEDMRLKGLHLNGITR-ALIRAVKELEEDAIENGEALVE 539
E M G + IT ALI ++ +E +E AL E
Sbjct: 520 FERMVQHGCLPDSITYGALISSL--CKESRLEEARALFE 556
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 47/250 (18%), Positives = 97/250 (38%), Gaps = 4/250 (1%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I F K GK + A++V G ++ TY I ++ A + ++M E
Sbjct: 396 NAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAE 455
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
PD II+ +C+ + +++ ++ + P + +I+ C+ +
Sbjct: 456 KSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTS 515
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
AL + + + ++I SLC+ + A+ L M+ + P + ++
Sbjct: 516 -ALKVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLA 574
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
Y + +T A+ L + R +T L+ + G ++ A L H
Sbjct: 575 YEYCRRDKITIAVSFLDRLDKR---QQAHTADALVRKLSTVGNLDAASLFLKNVLDKHYA 631
Query: 441 LSPVTYHTLI 450
+ TY + I
Sbjct: 632 VDHATYTSFI 641
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/219 (18%), Positives = 83/219 (37%), Gaps = 43/219 (19%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
++ C ++ L+D IG V T + +IA + +LGK +A +VF +
Sbjct: 468 IIAMYCQQRQMEQSQQLFDKCLSIGL----VPTKQTYTSMIAGYCRLGKLTSALKVFERM 523
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
+GC+ + TY G +IS CK +
Sbjct: 524 VQHGCLPDSITY-----------------------------------GALISSLCKESRL 548
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
+EA ++ +K + P L C+ D+ + +A+ LD + + +
Sbjct: 549 EEARALFETMLDKHLVPCDVTRVTLAYEYCRRDK-ITIAVSFLDRLDKRQQAHTA---DA 604
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++R L + ++ A L ++ + +A + S I++
Sbjct: 605 LVRKLSTVGNLDAASLFLKNVLDKHYAVDHATYTSFINS 643
>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
Length = 439
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 116/241 (48%), Gaps = 3/241 (1%)
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--L 308
A+ + E ++ G +P++ +I FCK G EA ++ + + + +VV F L
Sbjct: 194 AYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNAL 253
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
IS LC+ D ++ A +++ + +++++ LC+ + +M+ EG
Sbjct: 254 ISGLCKADR-LEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREG 312
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P + +++ A+ KAG + A ++++ M ++G+ PDV TYT L+ G G++ A
Sbjct: 313 CNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTAT 372
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
E + + V Y L+RG CK D A+K EM D + P+ L++ L
Sbjct: 373 EFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEML 432
Query: 489 C 489
C
Sbjct: 433 C 433
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 152/320 (47%), Gaps = 15/320 (4%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LIA K G+ A E +N+ + CV N + +L + D A ++ + I+
Sbjct: 9 LIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI-FRGIQCS 67
Query: 263 SLPDSEKVGKIISWFCKGGKAKEA-HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
P + +I+ FC+ +A + + + + + P + +I C+ D +
Sbjct: 68 --PSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDR-LDQ 124
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI-SEGPPPGNAVFNSVI 380
A +L++ S + + +SV R C+ + V A LL M+ + P +N +I
Sbjct: 125 ARQLLEESSCCSSD--VIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVII 182
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN--EAKKNH 438
+ KAG + A EML+ + S G P+ TYT L+ G+ G + EA ++ ++ +H
Sbjct: 183 HGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHH 242
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
+ + VT++ LI G CK + + A +L+ +MK ++ + Y L+ LC + RT+
Sbjct: 243 AEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQG---RTS 299
Query: 499 E--KLLEDMRLKGLHLNGIT 516
E ++ E+M +G + + +T
Sbjct: 300 EVSRVFEEMLREGCNPSVVT 319
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 7/136 (5%)
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P F+ +I+ KAG + A+E M R P++ L++ G+M++A I
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM-KDVGVQPNVDEYNKLIQSLC 489
+ + S +T + LI G+C+L+ D AL+L +EM K+ + P Y +I+ C
Sbjct: 61 FRGIQCSP---SVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117
Query: 490 -LKALDWRTAEKLLED 504
+ LD A +LLE+
Sbjct: 118 KMDRLDQ--ARQLLEE 131
>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
Length = 439
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 116/241 (48%), Gaps = 3/241 (1%)
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--L 308
A+ + E ++ G +P++ +I FCK G EA ++ + + + +VV F L
Sbjct: 194 AYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNAL 253
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
IS LC+ D ++ A +++ + +++++ LC+ + +M+ EG
Sbjct: 254 ISGLCKADR-LEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREG 312
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P + +++ A+ KAG + A ++++ M ++G+ PDV TYT L+ G G++ A
Sbjct: 313 CNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTAT 372
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
E + + V Y L+RG CK D A+K EM D + P+ L++ L
Sbjct: 373 EFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEML 432
Query: 489 C 489
C
Sbjct: 433 C 433
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 152/320 (47%), Gaps = 15/320 (4%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LIA K G+ A E +N+ + CV N + +L + D A ++ + I+
Sbjct: 9 LIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI-FRGIQCS 67
Query: 263 SLPDSEKVGKIISWFCKGGKAKEA-HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
P + +I+ FC+ +A + + + + + P + +I C+ D +
Sbjct: 68 --PSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDR-LDQ 124
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI-SEGPPPGNAVFNSVI 380
A +L++ S + + +SV R C+ + V A LL M+ + P +N +I
Sbjct: 125 ARQLLEESSCCSSD--VIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVII 182
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN--EAKKNH 438
+ KAG + A EML+ + S G P+ TYT L+ G+ G + EA ++ ++ +H
Sbjct: 183 HGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHH 242
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
+ + VT++ LI G CK + + A +L+ +MK ++ + Y L+ LC + RT+
Sbjct: 243 AEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQG---RTS 299
Query: 499 E--KLLEDMRLKGLHLNGIT 516
E ++ E+M +G + + +T
Sbjct: 300 EVSRVFEEMLREGCNPSVVT 319
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 10/132 (7%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
FS +I LC+ + A ++M+ P N ++++ +AG M AM +
Sbjct: 6 FSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAIF---- 61
Query: 401 SRGLK--PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKL 456
RG++ P V T L++G+ +++A E+ +E +KN + L P TY +I+ YCK+
Sbjct: 62 -RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFA-LVPEATTYTAIIKCYCKM 119
Query: 457 EEFDCALKLLNE 468
+ D A +LL E
Sbjct: 120 DRLDQARQLLEE 131
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 146/302 (48%), Gaps = 5/302 (1%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
GCV N+ TY I L + D A S+ ++M+ + +P+ G +I+ K G++ +
Sbjct: 272 GCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDG 331
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
+ + E+ + + + LIS L +E+++ + A+ + + + I +S++I
Sbjct: 332 VHLLSSLEERGHHANEYAYSTLISGLFKEEKSEE-AMGLWKKMVEKGCQPNIVVYSALID 390
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
LCR + AK +L +M+++G P ++S+I + K G+ A+ + K M P
Sbjct: 391 GLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVP 450
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
+ Y+ L+ G G++ EA + R V Y ++I G C + LKL
Sbjct: 451 NEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLF 510
Query: 467 NEM--KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAV 523
NEM ++ QP+V YN L+++LC K A LL M +G + + IT + A+
Sbjct: 511 NEMLCQESDSQPDVVTYNILLRALC-KQNSISHAIDLLNSMLDRGCNPDLITCNIFLNAL 569
Query: 524 KE 525
+E
Sbjct: 570 RE 571
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 120/265 (45%), Gaps = 5/265 (1%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
GC + T+ I L ++ + + M G +P+ II+ C GK +A
Sbjct: 237 GCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKA 296
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA--LDMLDDFSGEARKYAIKPFSSV 344
+ K P LI+ L ++ +V L L++ A +YA +S++
Sbjct: 297 VSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYA---YSTL 353
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
I L + + A L KM+ +G P V++++I + G + A E+L M ++G
Sbjct: 354 ISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGC 413
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
P+ +TY+ L+ G+ G ++A + E KN+ + + Y LI G C+ + A+
Sbjct: 414 TPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMM 473
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLC 489
+ M G++P+V Y+ +I LC
Sbjct: 474 MWTHMLGRGLRPDVVAYSSMIHGLC 498
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 143/327 (43%), Gaps = 10/327 (3%)
Query: 197 VEILNELIALFSKLGKG---KAAFEVFNKFGD-YGCVANQETYYFTIEALSRRKIFDWAW 252
V I I +F GK + A E+F + D + C ++ + + + +F A
Sbjct: 96 VFIEKNFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRAL 155
Query: 253 SVCEKMI--ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
E + +T P+ +I CK G A V+ +K P L+
Sbjct: 156 EFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMD 215
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
LC+ED + A+ +LD+ E + F+ +I LC+ D+ L+ M +G
Sbjct: 216 GLCKEDR-IDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCV 274
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P +N++I+ G + A+ +L M + P+ TY L++G G+ + +
Sbjct: 275 PNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHL 334
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
L+ ++ + Y TLI G K E+ + A+ L +M + G QPN+ Y+ LI LC
Sbjct: 335 LSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCR 394
Query: 491 KA-LDWRTAEKLLEDMRLKGLHLNGIT 516
+ LD A+++L +M KG N T
Sbjct: 395 EGKLD--EAKEILCEMVNKGCTPNAFT 419
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 121/289 (41%), Gaps = 17/289 (5%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI+ K K + A ++ K + GC N Y I+ L R D A + +M+ G
Sbjct: 353 LISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKG 412
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P++ +I F K G +++A V+ + P + + LI LC ED ++ A
Sbjct: 413 CTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLC-EDGKLREA 471
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE--GPPPGNAVFNSVI 380
+ M G + + +SS+I LC V L ++M+ + P +N ++
Sbjct: 472 MMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILL 531
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
A K ++ A+++L M RG PD+ T ++ E LN +
Sbjct: 532 RALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALR---------EKLNPPQDGREF 582
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
L + ++R + K + A K++ M + PN + ++I LC
Sbjct: 583 LDEL----VVRLH-KRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELC 626
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 92/210 (43%), Gaps = 7/210 (3%)
Query: 175 KEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQET 234
+E LW + E G + + + + LI + GK A E+ + + GC N T
Sbjct: 364 EEAMGLWKKMVEKGCQP----NIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFT 419
Query: 235 YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR 294
Y I+ + A V ++M + +P+ +I C+ GK +EA +++T
Sbjct: 420 YSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHML 479
Query: 295 EKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEA--RKYAIKPFSSVIRSLCRMK 352
+ + P + +I LC +V++ L + ++ + + + ++ ++R+LC+
Sbjct: 480 GRGLRPDVVAYSSMIHGLCNAG-SVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQN 538
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+ A LL+ M+ G P N ++A
Sbjct: 539 SISHAIDLLNSMLDRGCNPDLITCNIFLNA 568
>gi|297739653|emb|CBI29835.3| unnamed protein product [Vitis vinifera]
Length = 852
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 146/319 (45%), Gaps = 6/319 (1%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
E N LI + G+ + A + + ++ TY I A + A +VC+K
Sbjct: 198 ETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKK 257
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M E G PD ++S + +G + + + L + + P + + +I L + +
Sbjct: 258 MTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQ 317
Query: 318 TVKLALDMLDDFSGEARKYA---IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
K A+D+ + E R + F+++I + +T + M++EG P
Sbjct: 318 NGK-AIDIFNSMK-EKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIV 375
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
+N++I AY+ G A + ++ G PDV +YT L++ Y G+ E+A ++
Sbjct: 376 SYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELM 435
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
++NH + + V+Y+ LI Y A+++L+EM+ GVQPN+ L+ + C +
Sbjct: 436 RRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAA-CGRCGQ 494
Query: 495 WRTAEKLLEDMRLKGLHLN 513
+ +L L+G+ LN
Sbjct: 495 KVKIKSVLSAAELRGIKLN 513
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 145/343 (42%), Gaps = 4/343 (1%)
Query: 182 DIVKEIGEKEKGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIE 240
DI + EK V +I L+S G+ + FN G N +Y I
Sbjct: 323 DIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIG 382
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP 300
A + + A+SV ++ + G PD +++ + K GK ++A V+ L R P
Sbjct: 383 AYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKP 442
Query: 301 PQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTL 360
LI + + + A+++L + + I +++ + R K++
Sbjct: 443 NLVSYNALIDAYGSKGLLTE-AVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSV 501
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
LS G +NS I +Y G+ A+ + + MR++ +KPD TY L+SG
Sbjct: 502 LSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCK 561
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
+ EA L+E LS Y ++I Y K + A + +MK VG +P+V
Sbjct: 562 MSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVIT 621
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRA 522
Y +I + + A +W A L +M + + I +L+RA
Sbjct: 622 YTAMIHAYDV-AENWEKASALFLEMETDDVQPDSIACSSLMRA 663
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 146/344 (42%), Gaps = 6/344 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+AL+ A S KE +++++ +K+ G V +LN + K GK + A +VF
Sbjct: 378 NALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNA----YGKSGKPEKAMKVFE 433
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
C N +Y I+A + + A + +M G P+ + +++ + G
Sbjct: 434 LMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCG 493
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ + V + A + + + I S E K AL + + K +
Sbjct: 494 QKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDK-ALSLYRAMRTKKVKPDPVTY 552
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+ +I C+M A L +M+ P V++SVI AYSK G +T A M M+
Sbjct: 553 NVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKM 612
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G +PDV TYT ++ Y E+A + E + + + + +L+R + K +
Sbjct: 613 VGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAK 672
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
L L M++ + N + +++ S C +WR L++ M
Sbjct: 673 VLVLAEFMREKKIPFNNSSFFEMV-SACSLLREWREIIGLIKLM 715
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 129/325 (39%), Gaps = 36/325 (11%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI G K A V K + G + T+ + A R + S E M
Sbjct: 236 NNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKG 295
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL----ISSLCQED 316
T PD+ + +I K G+ +A ++ +EK+ VV F + S+C +
Sbjct: 296 TNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQI 355
Query: 317 ETVKLALDML--------------------------DDFS--GEARKYAIKP----FSSV 344
E + A + + + FS E +K P ++S+
Sbjct: 356 ENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSL 415
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
+ + + A + M P +N++I AY G +T A+E+L M G+
Sbjct: 416 LNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGV 475
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
+P++ + L++ GQ + +L+ A+ +L+ Y++ I Y + E+D AL
Sbjct: 476 QPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALS 535
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLC 489
L M+ V+P+ YN LI C
Sbjct: 536 LYRAMRTKKVKPDPVTYNVLISGCC 560
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 66/148 (44%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++ +IR R V A+ L +M P +N++I+A+ +AG AM ++ M
Sbjct: 165 YNMMIRLHARHNIVDQARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 224
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+ P TY L++ + G +EA + + +N VT++ ++ Y + ++
Sbjct: 225 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYS 284
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSL 488
L MK ++P+ N +I L
Sbjct: 285 KVLSYFELMKGTNIRPDTTTLNIVIYCL 312
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 104/253 (41%), Gaps = 4/253 (1%)
Query: 195 LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSV 254
L+ E+ + +I +SK G+ A +F K GC + TY I A + ++ A ++
Sbjct: 582 LSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASAL 641
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
+M PDS ++ F KGG+ + V+ REKK+ P + F + S C
Sbjct: 642 FLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKI-PFNNSSFFEMVSACS 700
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
+ + ++ +I + ++ L + + L K+++ G
Sbjct: 701 LLREWREIIGLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMKLFYKIVASGAEINFY 760
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI---L 431
++ ++ AG+ +E+L+ M GL+P V Y + S N E A I +
Sbjct: 761 TYSILLKNLLAAGNWRKYIEVLQWMEEAGLQPSVGMYRSISSFAQNRSGAEYAAVIQERI 820
Query: 432 NEAKKNHSRLSPV 444
K+N +P
Sbjct: 821 ESLKRNSRNQNPT 833
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 75/172 (43%), Gaps = 5/172 (2%)
Query: 321 LALDMLDDFSGEARK----YAIKPFSSVIRSLCRMKDV-HGAKTLLSKMISEGPPPGNAV 375
L L+ DD G + ++ K F +IR + ++ + H + + N +
Sbjct: 105 LKLNHWDDVEGLLNRWVGRFSRKNFPLLIREITQIGSLEHSVQVFRWMKNQKNYCARNDI 164
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N +I +++ + A + M+ KPD TY L++ + GQ A I+++
Sbjct: 165 YNMMIRLHARHNIVDQARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 224
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
+ S TY+ LI + AL + +M + GV P++ +N ++ +
Sbjct: 225 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSA 276
>gi|297837133|ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
gi|297332289|gb|EFH62707.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 126/279 (45%), Gaps = 2/279 (0%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
GC + + + L R A ++ ++M+E G P+ G I++ CK G A
Sbjct: 5 GCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGDTDSA 64
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
+ E + + +I LC++ K A ++ + + + ++ +I
Sbjct: 65 LNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSK-AQNLFTEMHDKGIFPNVLTYNCMID 123
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
C A+ LL MI P FN++I+A+ K G ++ A E+ + M R + P
Sbjct: 124 GCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIFP 183
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
D TY L+ G+ ++++A I + + +T +TLI G C+ + D +KLL
Sbjct: 184 DTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLL 243
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
+EM G+ P+ YN LI C +A D A+ L ++M
Sbjct: 244 HEMLRRGLVPDSVSYNTLIHGFC-QAGDLNAAQDLFQEM 281
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 115/253 (45%), Gaps = 2/253 (0%)
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M+E G D +++ C+ G+ EA + E P + +++ +C+ +
Sbjct: 1 MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
T AL++L K + ++++I LC+ A+ L ++M +G P +N
Sbjct: 61 T-DSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYN 119
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+I G T A ++L+ M + PDV T+ L++ + G++ EA E+ E
Sbjct: 120 CMIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGR 179
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
+ +TY++LI G+CK D A + + M G PNV N LI C +A
Sbjct: 180 NIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGG-CCRAKRVDD 238
Query: 498 AEKLLEDMRLKGL 510
KLL +M +GL
Sbjct: 239 GIKLLHEMLRRGL 251
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 3/164 (1%)
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
M+ +G FN++++ + G + A ++ M G +P+ TY +++G G
Sbjct: 1 MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
+ A +L + ++H + V Y +I CK A L EM D G+ PNV YN
Sbjct: 61 TDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNC 120
Query: 484 LIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRA-VKE 525
+I C W AE+LL DM + + +T ALI A VKE
Sbjct: 121 MIDGCCSYG-KWTDAEQLLRDMIESNVDPDVVTFNALINAFVKE 163
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 86/208 (41%), Gaps = 5/208 (2%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V I +I K G A +F + D G N TY I+ + A +
Sbjct: 80 VVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMIDGCCSYGKWTDAEQLLR 139
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
MIE+ PD +I+ F K GK EA +Y + ++P LI C+
Sbjct: 140 DMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIFPDTITYNSLIDGFCKHS 199
Query: 317 --ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
+ K D++ G I +++I CR K V LL +M+ G P +
Sbjct: 200 RLDDAKHIFDLMVSKGGSPNVITI---NTLIGGCCRAKRVDDGIKLLHEMLRRGLVPDSV 256
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+N++I + +AGD+ A ++ + M S+
Sbjct: 257 SYNTLIHGFCQAGDLNAAQDLFQEMISQ 284
>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
macrostachya]
Length = 414
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 124/244 (50%), Gaps = 2/244 (0%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
+I+ + + G ++A Y L RE K + P ++ + + + KL ++
Sbjct: 61 LITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHM-MKLKYFKLVWGFYEEILEC 119
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
++ F+ ++ C+ D+ A+++ + + G P FN++++ Y + GD+
Sbjct: 120 GYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEG 179
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
+ M + G++PDVYTY+ L++G +M++A E+ +E + VT+ TLI G
Sbjct: 180 FRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDG 239
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
+CK D A+++ +M + P++ YN LI LC K D + A L+++M +KGL
Sbjct: 240 HCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG-DLKQAHDLIDEMSMKGLKP 298
Query: 513 NGIT 516
+ IT
Sbjct: 299 DKIT 302
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 164/391 (41%), Gaps = 57/391 (14%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L++ + S GK A++ + E ++ + + + LI + + G + A E +
Sbjct: 23 SLIQVVVSRKGKGSASAVFAAILETKGTQRS--DIYVFSGLITAYLESGFLRDAIECYRL 80
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
++ +T +E + + K F W E+++E G ++ FCK G
Sbjct: 81 TREHKFWVPFDTCRKVLEHMMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGD 140
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAF----------------------------------- 307
+ A V+ + + P SVV+F
Sbjct: 141 IRVAQSVFNAITKWGLRP--SVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTY 198
Query: 308 --LISSLCQE---DETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAK 358
LI+ LC+E D+ +L +MLD + P F+++I C+ V A
Sbjct: 199 SVLINGLCKESKMDDANELFDEMLDK--------GLVPNGVTFTTLIDGHCKSGRVDLAM 250
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+ +M+S+ P +N++I K GD+ A +++ M +GLKPD TYT L+ G
Sbjct: 251 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGC 310
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G +E A E + + RL V Y LI G C+ + A K+L EM G++P+
Sbjct: 311 CKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAGLKPDT 370
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
Y +I C K W T KLL++M+ G
Sbjct: 371 GTYTMIINEFCKKGDVW-TGSKLLKEMQRDG 400
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 134/312 (42%), Gaps = 5/312 (1%)
Query: 175 KEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQET 234
K V+ ++ + E G ++ N L+ F K G + A VFN +G + +
Sbjct: 107 KLVWGFYEEILECGYPA----SLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVS 162
Query: 235 YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR 294
+ + R D + + M +G PD +I+ CK K +A+ ++
Sbjct: 163 FNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 222
Query: 295 EKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDV 354
+K + P LI C+ V LA+++ ++ + ++++I LC+ D+
Sbjct: 223 DKGLVPNGVTFTTLIDGHCKSGR-VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDL 281
Query: 355 HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
A L+ +M +G P + ++I K GD+ A E K M ++ D YT L
Sbjct: 282 KQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTAL 341
Query: 415 MSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV 474
+SG G+ +A ++L E + TY +I +CK + KLL EM+ G
Sbjct: 342 ISGLCQEGRYLDAEKVLREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGH 401
Query: 475 QPNVDEYNKLIQ 486
P+V YN L+
Sbjct: 402 VPSVVTYNVLMN 413
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 117/253 (46%), Gaps = 1/253 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N L+ + +LG F + + G + TY I L + D A + ++M+
Sbjct: 163 FNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 222
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G +P+ +I CK G+ A +Y + + P LI LC++ + +
Sbjct: 223 DKGLVPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD-L 281
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
K A D++D+ S + K ++++I C+ D+ A +MI E + + ++
Sbjct: 282 KQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTAL 341
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
IS + G A ++L+ M S GLKPD TYT +++ + G + ++L E +++
Sbjct: 342 ISGLCQEGRYLDAEKVLREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGH 401
Query: 440 RLSPVTYHTLIRG 452
S VTY+ L+ G
Sbjct: 402 VPSVVTYNVLMNG 414
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 34/175 (19%), Positives = 73/175 (41%), Gaps = 20/175 (11%)
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMIS-EGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+ + ++I LC + + AK+L+ ++S +G +AVF +++
Sbjct: 1 TLDSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQ--------- 51
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
+ D+Y ++GL++ Y G + +A E +++ + T ++ K
Sbjct: 52 ---------RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHMMK 102
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
L+ F E+ + G ++ +N L+ C K D R A+ + + GL
Sbjct: 103 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFC-KEGDIRVAQSVFNAITKWGL 156
>gi|357140426|ref|XP_003571769.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Brachypodium distachyon]
Length = 637
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 149/352 (42%), Gaps = 38/352 (10%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + K G+ F++ GC N Y IEAL + K+ D V KMIE+
Sbjct: 262 LIRMSGKTGQTYKFLSFFDEMVSRGCALNLIAYNTVIEALGKNKMVDKVIFVLSKMIESD 321
Query: 263 SLPDS----------------EKVGKI----------------ISWFCKGGKAKEAHVVY 290
P+ ++ ++ + CK G A EAH V+
Sbjct: 322 CQPNQFTYSLTLDILATEGQLHRLNEVLDICDRYLNKSIYSYLVKSLCKSGHASEAHNVF 381
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
+ ++ LC +T++ A+D+L + I ++ V +L +
Sbjct: 382 CRMWNSHESGDRDAFISMLEVLCNSGKTLE-AIDLLHMMPEKGIDTDIGMYNMVFSALGK 440
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+K V TL KM + G P +N +IS+Y + G + A + + M + KPDV T
Sbjct: 441 LKQVSFISTLFDKMKASGIAPDLFTYNIMISSYGRVGLVDKASGLFEEMEASSCKPDVIT 500
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
Y L++ G ++EA + E ++ TY TLI + K + D A L +EM
Sbjct: 501 YNTLINCLGKNGDLDEAHILFKEMQEKGYDPDVFTYSTLIECFGKSNKVDMACSLFDEMI 560
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAE--KLLEDMRLKGLHLNGITRALI 520
G PN+ YN L+ L + +TAE K E M+ +GL + IT +++
Sbjct: 561 AEGCIPNIVTYNILLDCLERRG---KTAEAHKHYETMKQQGLTPDSITYSIL 609
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 101/253 (39%), Gaps = 42/253 (16%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLT-VEILNELIALFSKLGKGKAAFEVFN 221
++L+ +C+S E L ++ E KG+ T + + N + + KL + +F+
Sbjct: 398 SMLEVLCNSGKTLEAIDLLHMMPE-----KGIDTDIGMYNMVFSALGKLKQVSFISTLFD 452
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
K G + TY I + R + D A + E+M + PD +I+ K G
Sbjct: 453 KMKASGIAPDLFTYNIMISSYGRVGLVDKASGLFEEMEASSCKPDVITYNTLINCLGKNG 512
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
EAH+++ +EK P D F+ +
Sbjct: 513 DLDEAHILFKEMQEKGYDP--------------------------DVFT----------Y 536
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
S++I + V A +L +MI+EG P +N ++ + G A + + M+
Sbjct: 537 STLIECFGKSNKVDMACSLFDEMIAEGCIPNIVTYNILLDCLERRGKTAEAHKHYETMKQ 596
Query: 402 RGLKPDVYTYTGL 414
+GL PD TY+ L
Sbjct: 597 QGLTPDSITYSIL 609
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 103/263 (39%), Gaps = 4/263 (1%)
Query: 226 YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKE 285
+G N TY ++A R + + V E+M G D ++ K G +
Sbjct: 180 WGLRLNGYTYKCIVQAHLRSREVSKGFEVYEEMHRKGYKLDIFAYNMLLDALAKAGMVDQ 239
Query: 286 AHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVI 345
A+ V+ ++K P LI + +T K L D+ + +++VI
Sbjct: 240 AYQVFEDMKQKYCVPDAYTYTILIRMSGKTGQTYKF-LSFFDEMVSRGCALNLIAYNTVI 298
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
+L + K V +LSKMI P ++ + + G + E+L + R L
Sbjct: 299 EALGKNKMVDKVIFVLSKMIESDCQPNQFTYSLTLDILATEGQLHRLNEVLDIC-DRYLN 357
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
+Y+Y L+ G EA + +H + +++ C + A+ L
Sbjct: 358 KSIYSY--LVKSLCKSGHASEAHNVFCRMWNSHESGDRDAFISMLEVLCNSGKTLEAIDL 415
Query: 466 LNEMKDVGVQPNVDEYNKLIQSL 488
L+ M + G+ ++ YN + +L
Sbjct: 416 LHMMPEKGIDTDIGMYNMVFSAL 438
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 4/173 (2%)
Query: 333 ARKYAIK----PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD 388
A+K+ ++ + ++++ R ++V + +M +G +N ++ A +KAG
Sbjct: 177 AKKWGLRLNGYTYKCIVQAHLRSREVSKGFEVYEEMHRKGYKLDIFAYNMLLDALAKAGM 236
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHT 448
+ A ++ + M+ + PD YTYT L+ GQ + +E L+ + Y+T
Sbjct: 237 VDQAYQVFEDMKQKYCVPDAYTYTILIRMSGKTGQTYKFLSFFDEMVSRGCALNLIAYNT 296
Query: 449 LIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+I K + D + +L++M + QPN Y+ + L + R E L
Sbjct: 297 VIEALGKNKMVDKVIFVLSKMIESDCQPNQFTYSLTLDILATEGQLHRLNEVL 349
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 147/315 (46%), Gaps = 13/315 (4%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKI-----------FDWA 251
+I F K + + A +F+ GC + T I+ R K + A
Sbjct: 191 MIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVA 250
Query: 252 WSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISS 311
+ ++MI G PD +++ C+ GK ++A ++ + ++ KM + +I+
Sbjct: 251 QDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIING 310
Query: 312 LCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
+C+ ++ V A D+ + + + ++ +I + + A+ + +M+ +G P
Sbjct: 311 MCKGNK-VDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIP 369
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+NS++ + K + A +M+ M S G PDV T++ L+ GY G++++ E+
Sbjct: 370 STVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELF 429
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
+E + +TY+ LI G+CK+ + + A + EM GV P+ + ++ LC K
Sbjct: 430 SEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTK 489
Query: 492 ALDWRTAEKLLEDMR 506
A + + +LED++
Sbjct: 490 A-ELQKGLTMLEDLQ 503
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 121/274 (44%), Gaps = 12/274 (4%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
GC AN T+ + L R A ++ ++M+E G PD+ G I++ CK G A
Sbjct: 5 GCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSA 64
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
+ E ++ + + ++ LC++ +K A ++ + + + ++ +I
Sbjct: 65 LNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIK-AQNIFTEMHEKGIFPNVLTYNCMID 123
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
C A+ LL MI P F+++I+A+ K G ++ A E+ + M R + P
Sbjct: 124 GYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFP 183
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHT-----------LIRGYCK 455
TY+ ++ G+ ++E+A + + +T +T LI G+C+
Sbjct: 184 TTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQ 243
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + A L EM GV P++ N L+ LC
Sbjct: 244 VGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLC 277
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 111/232 (47%), Gaps = 1/232 (0%)
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M+ETG + +++ C+ G+ +A + E+ P +++ +C+ +
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
TV AL+ML K + +S+++ LC+ + A+ + ++M +G P +N
Sbjct: 61 TVS-ALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYN 119
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+I Y G + A ++L+ M R + PDV T++ L++ + G++ A E+ E +
Sbjct: 120 CMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRR 179
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + +TY ++I G+CK + A + + M G P++ N LI C
Sbjct: 180 NIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCC 231
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 137/331 (41%), Gaps = 13/331 (3%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V I + ++ K G A +F + + G N TY I+ + A +
Sbjct: 80 VVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLR 139
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
MIE PD +I+ F K GK A +Y + ++P + +I C+
Sbjct: 140 DMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHS 199
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD--VHG---------AKTLLSKMI 365
++ A M D + I +++I CR K +HG A+ L +MI
Sbjct: 200 R-LEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMI 258
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
S G P N++++ + G + A+EM K+ + + D T +++G G +++
Sbjct: 259 SNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVD 318
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
EA ++ N N VTY+ LI + K F A + EM G+ P+ YN ++
Sbjct: 319 EAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMV 378
Query: 486 QSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
C K A ++++ M +G + +T
Sbjct: 379 DGFC-KQNRLEEARQMVDSMVSEGCSPDVVT 408
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 99/236 (41%), Gaps = 1/236 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+A + GK + A E+F F + T I + + D AW + +
Sbjct: 270 NTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPV 329
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G D +I F K G A +Y K + P ++ C+++ ++
Sbjct: 330 NGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNR-LE 388
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A M+D E + FS++I+ C+ V L S+M G +N++I
Sbjct: 389 EARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALI 448
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
+ K GD+ A ++ + M S G+ PD T+ +++G ++++ +L + +K
Sbjct: 449 HGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQK 504
>gi|224083888|ref|XP_002307160.1| predicted protein [Populus trichocarpa]
gi|222856609|gb|EEE94156.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 152/346 (43%), Gaps = 22/346 (6%)
Query: 182 DIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEA 241
D+ EI ++G + + + L+ FSK GK A E+ + N++T+ I
Sbjct: 122 DVFNEI--HDRGWVDEYVFSILVLAFSKWGKVDKACELIETMEEKNVRLNKKTFCSLIYG 179
Query: 242 LSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPP 301
+ D A + +KM ++G PD II C K+A +Y+ + K+ P
Sbjct: 180 FVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVKKALCLYSEMKGFKIQPD 239
Query: 302 QSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLL 361
+V LISS +E+E +M +D +A ++SV+ SL VH A LL
Sbjct: 240 VKIVTKLISSFSKEEELTCFFEEMHEDMDPKASTLL---YNSVLNSLVDNGSVHKAYHLL 296
Query: 362 SKM-----ISEGP-----------PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
+ I +G PP + F+ VI+ K GD+ A+ + + M G K
Sbjct: 297 QAITIGNCIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCK 356
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
PD+ Y L+ G +++E+C +L E +++ + T + + C+ + AL L
Sbjct: 357 PDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFTNNCIFGCLCRRHDISGALHL 416
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH 511
L +M+ G P + L++ LC + A K L DM +G
Sbjct: 417 LKKMRIHGHVPWIKHSTSLVKELCKHGKEVE-ACKFLVDMAEEGFQ 461
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 116/260 (44%), Gaps = 3/260 (1%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
N T+ I L + D A + M G PD +I C + +E+ +
Sbjct: 323 NSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLL 382
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
E + P + LC+ + + AL +L IK +S+++ LC+
Sbjct: 383 QEMEESGIEPTSFTNNCIFGCLCRRHD-ISGALHLLKKMRIHGHVPWIKHSTSLVKELCK 441
Query: 351 M-KDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
K+V K L+ M EG P +++ + K ++ A+++ + + ++G PDV
Sbjct: 442 HGKEVEACKFLVD-MAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVI 500
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
Y L+ G ++ EA +L+E ++ S VTY+TLI G CK + + A+ L+ M
Sbjct: 501 AYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMM 560
Query: 470 KDVGVQPNVDEYNKLIQSLC 489
+ +PNV Y+ LI LC
Sbjct: 561 IEKEREPNVITYSTLINGLC 580
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 121/269 (44%), Gaps = 2/269 (0%)
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP 300
L RR A + +KM G +P + ++ CK GK EA E+ P
Sbjct: 403 CLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEGFQP 462
Query: 301 PQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTL 360
+ + L + E V AL + D + + ++ +I+ LC+ + + A+ L
Sbjct: 463 DIVAYSACLDGLIKIQE-VDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNL 521
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
L +M +G P +N++I K + AM L +M + +P+V TY+ L++G N
Sbjct: 522 LHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMIEKEREPNVITYSTLINGLCN 581
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
G+ ++A + NE + S + Y I G + AL L EM++ ++P+
Sbjct: 582 AGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGRPNEALVYLREMEEREMKPDTYV 641
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
Y L+ + + + + A ++L++M KG
Sbjct: 642 YVGLLNAFLVDS-NQPLAFEILQEMVDKG 669
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 104/225 (46%), Gaps = 1/225 (0%)
Query: 292 LAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRM 351
L R K M PP S ++ + + + LA+ + D + K + ++++I LC
Sbjct: 313 LFRGKAMVPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTS 372
Query: 352 KDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTY 411
+ + LL +M G P + N + + D++ A+ +LK MR G P +
Sbjct: 373 NRLQESCGLLQEMEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHS 432
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
T L+ G+ EAC+ L + + + V Y + G K++E D ALKL ++
Sbjct: 433 TSLVKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICA 492
Query: 472 VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
G P+V YN LI+ LC K A+ LL +M KGL + +T
Sbjct: 493 QGYCPDVIAYNILIKGLC-KTQRIAEAQNLLHEMEEKGLVPSAVT 536
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 106/224 (47%), Gaps = 11/224 (4%)
Query: 270 VGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS-----VVAFLISSLCQEDETVKLALD 324
+G +I G EA++++ ++ + P S ++ L S+C + +++ L
Sbjct: 33 LGFLIRCLGNAGLVVEANLLFDQVQKMGLCVPNSYSYTCLLEVLSKSICID--LLEMRLK 90
Query: 325 MLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
+ D KY + P V++ C M + A + +++ G VF+ ++ A+S
Sbjct: 91 EMHDHGWGFDKYTLTP---VLQVYCNMAEFDKALDVFNEIHDRGWV-DEYVFSILVLAFS 146
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV 444
K G + A E+++ M + ++ + T+ L+ G+ ++++A + ++ KK+
Sbjct: 147 KWGKVDKACELIETMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDIS 206
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
Y +I G C ++ AL L +EMK +QP+V KLI S
Sbjct: 207 LYDVIIGGLCVNKDVKKALCLYSEMKGFKIQPDVKIVTKLISSF 250
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 83/225 (36%), Gaps = 36/225 (16%)
Query: 209 KLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSE 268
K+ + A ++F G + Y I+ L + + A ++ +M E G +P +
Sbjct: 476 KIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAV 535
Query: 269 KVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDD 328
+I CK +EA + ++ EK+ P
Sbjct: 536 TYNTLIDGLCKTDHLEEAMLFLSMMIEKEREP---------------------------- 567
Query: 329 FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD 388
+ +S++I LC A L ++M +G P + + + I S G
Sbjct: 568 --------NVITYSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGR 619
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
A+ L+ M R +KPD Y Y GL++ + A EIL E
Sbjct: 620 PNEALVYLREMEEREMKPDTYVYVGLLNAFLVDSNQPLAFEILQE 664
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 138/312 (44%), Gaps = 2/312 (0%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
I +I F + G A V ++ +GC+ + TY + L ++ A + +M
Sbjct: 334 IYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEM 393
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
E G PD +I +C+ G + A ++ +++ P LI +C++ +
Sbjct: 394 EERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDL 453
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
K A ++ DD +S +I S C V A L +M+ +G P +NS
Sbjct: 454 AK-ANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNS 512
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I Y ++G++ + L+ MR + PD+ T+ L+ GY M A + N +K
Sbjct: 513 IIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEM 572
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
R VTY+ +I G+ + A ++ M D G++P+ Y LI + A + + A
Sbjct: 573 VRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGH-VTAGNSKQA 631
Query: 499 EKLLEDMRLKGL 510
+L ++M +G
Sbjct: 632 FQLHDEMIHRGF 643
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 155/367 (42%), Gaps = 39/367 (10%)
Query: 187 IGEKEKGVLTVEIL--NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSR 244
I E EK + +++ N LI + G AA + + + G TY ++ L +
Sbjct: 180 ISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCK 239
Query: 245 RKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP---- 300
+ FD A V M + PD +I FC+ G+ KEA Y + + + P
Sbjct: 240 HRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVS 299
Query: 301 ------------------------------PQSVV-AFLISSLCQEDETVKLALDMLDDF 329
P V+ +I C+ ++ AL + D+
Sbjct: 300 FSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAG-SMSEALRVRDEM 358
Query: 330 SGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
G + +++++ LC+ + A+ LL++M G P F ++I Y + G+
Sbjct: 359 VGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNF 418
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
A+++ + + L+PDV TY L+ G G + +A E+ ++ + +TY L
Sbjct: 419 ENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSIL 478
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
I +C+ + + A L+EM G PN+ YN +I+ C ++ + + ++ L+ MR
Sbjct: 479 IDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYC-RSGNVKKGQQFLQKMRQDN 537
Query: 510 LHLNGIT 516
+ + IT
Sbjct: 538 VFPDLIT 544
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 126/286 (44%), Gaps = 1/286 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI LFS+ G+ A + G V + Y I R A V ++M+ G
Sbjct: 303 LIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFG 362
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
LPD +++ CK + +A + E+ + P LI C++ + A
Sbjct: 363 CLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQG-NFENA 421
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
L + D + + + ++S+I +CR D+ A L M + P + ++ +I +
Sbjct: 422 LQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDS 481
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ + G + A L M +G P++ TY ++ GY G +++ + L + ++++
Sbjct: 482 HCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPD 541
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+T++TLI GY K E A + N M+ V+P+ YN +I
Sbjct: 542 LITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGF 587
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 128/290 (44%), Gaps = 1/290 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V N LI F ++G+ K A + + + + ++ I SRR D A +
Sbjct: 262 VRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLR 321
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M G +PD +I FC+ G EA V P L++ LC++
Sbjct: 322 EMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQH 381
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ A +L++ + F+++I CR + A L ++ + P +
Sbjct: 382 RLLD-AEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTY 440
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
NS+I + GD+ A E+ M +R + P+ TY+ L+ + GQ+E+A L+E K
Sbjct: 441 NSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVK 500
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
+ + TY+++I+GYC+ + L +M+ V P++ +N LI
Sbjct: 501 KGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIH 550
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 142/313 (45%), Gaps = 2/313 (0%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
++ + LI +++ K + AFE F D+ + LSR A
Sbjct: 88 QVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEAYRL 147
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
++ + S ++ + ++ +CK + A V + ++ ++P LI + + +
Sbjct: 148 VLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGD 207
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
V A+ ++D + K I ++SV++ LC+ + AK + M P FN
Sbjct: 208 -VDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFN 266
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+I + + G++ A++ K M+ R + PDV +++ L+ ++ G+M+ A L E K
Sbjct: 267 ILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGL 326
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
V Y +I G+C+ AL++ +EM G P+V YN L+ LC K
Sbjct: 327 GLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLC-KQHRLLD 385
Query: 498 AEKLLEDMRLKGL 510
AEKLL +M +G+
Sbjct: 386 AEKLLNEMEERGV 398
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 123/281 (43%), Gaps = 1/281 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V N L+ K + A ++ N+ + G + T+ I R+ F+ A + +
Sbjct: 367 VVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFD 426
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
++ PD +I C+ G +A+ ++ +++ P + LI S C++
Sbjct: 427 TLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKG 486
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ V+ A LD+ + I+ ++S+I+ CR +V + L KM + P F
Sbjct: 487 Q-VEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITF 545
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N++I Y K +M A + +M ++PD TY +++G++ G M++A +
Sbjct: 546 NTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGD 605
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
+ TY +LI G+ A +L +EM G P+
Sbjct: 606 SGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPD 646
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 98/236 (41%), Gaps = 19/236 (8%)
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLS 362
++ S C+ L D D E K + P + +I + R DV A L+
Sbjct: 162 IMVHSYCK-----TLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVD 216
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG 422
M + G PG +NSV+ K A E+ + M + PDV ++ L+ G+ G
Sbjct: 217 SMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVG 276
Query: 423 QMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
+++EA + E + + V++ LI + + E D A L EMK +G+ P+ Y
Sbjct: 277 EVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYT 336
Query: 483 KLIQSLC--------LKALDWRTAEKLLEDMRLKGLHLNGITRA--LIRAVKELEE 528
+I C L+ D L D+ LNG+ + L+ A K L E
Sbjct: 337 MVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNE 392
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 77/165 (46%), Gaps = 3/165 (1%)
Query: 348 LCRMKDVHGA--KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
L RM GA + ++S +++ P P VF+ +I Y+++ A E +L+ +
Sbjct: 60 LLRMSRRRGASRREIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVP 119
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
L++ + G A E + S ++ T + ++ YCK EFD A +
Sbjct: 120 VPASASNALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTV 179
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
++EM+ V P+V +N LI + +A D A L++ M +GL
Sbjct: 180 ISEMEKRCVFPDVVTHNVLIDAR-FRAGDVDAAIALVDSMANRGL 223
>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 115/238 (48%), Gaps = 1/238 (0%)
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+++IE G P +I FCK GK EA + + + P L++ C+E
Sbjct: 531 KQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEE 590
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ + DML + +A K ++ V++ LC+ +H + LL M + G P
Sbjct: 591 GDMHSM-FDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQIT 649
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N+VI ++ KA D+ A ++ M L+P TY L++G G +++A +L +
Sbjct: 650 YNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQ 709
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
RL+ V Y T+I+ +C + AL ++M + G + ++ +Y+ +I LC + L
Sbjct: 710 DQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNL 767
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 141/314 (44%), Gaps = 10/314 (3%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI ++G + +F++ K G + TY + +L + D A + +M G
Sbjct: 381 LICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIG 440
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD + G +EA +Y K++YP V + +IS L E + A
Sbjct: 441 LKPDLLTYSR--------GAVEEAIELYEEMCSKRIYPNSFVCSAIISGLF-EKGAISEA 491
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
D + I ++ +I ++ ++ A ++I +G P FNS+I
Sbjct: 492 QMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYG 551
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ K G + A+++L ++ GL P TYT LM+GY G M ++L+E + + +
Sbjct: 552 FCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPT 611
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
+TY +++G CK +++LL M G+ P+ YN +IQS C KA D + A +L
Sbjct: 612 QITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFC-KAHDLQKAFQLH 670
Query: 503 EDMRLKGLHLNGIT 516
M L + +T
Sbjct: 671 NQMLQHSLQPSPVT 684
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 147/336 (43%), Gaps = 35/336 (10%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G + A E N ++G + TY + AW V ++M+ G PD
Sbjct: 319 GSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTY 378
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYP--PQSVVAF--LISSLCQE---DETVKLAL 323
+I C+ G +E+ + +EK + S+V + L+SSLC+ DE V L
Sbjct: 379 TILICGHCQMGNIEESFKL----KEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLH 434
Query: 324 DM--------LDDFSGEARKYAIKPF---------------SSVIRSLCRMKDVHGAKTL 360
+M L +S A + AI+ + S++I L + A+
Sbjct: 435 EMEVIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMY 494
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
+ ++N +I Y+K G++ A+ K + +G+ P + T+ L+ G+
Sbjct: 495 FDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCK 554
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
G++ EA ++L+ K + + VTY TL+ GYC+ + +L+EM+ ++P
Sbjct: 555 KGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQIT 614
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
Y +++ LC K + +LL+ M +GL + IT
Sbjct: 615 YTVVVKGLC-KEGRLHESVQLLKYMYARGLFPDQIT 649
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 4/224 (1%)
Query: 308 LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
LI LC++ ++ A+ L + GE ++ F++++ C+M V AK+ MI
Sbjct: 241 LIDGLCRQSR-LQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKY 299
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P +N ++ AG M A+E M + G++PD+ TY L +G+ G + A
Sbjct: 300 GLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGA 359
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
+++ N VTY LI G+C++ + + KL +M G++ ++ Y L+ S
Sbjct: 360 WKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSS 419
Query: 488 LCLKALDWRTAEKLLEDMRLKGLHLNGIT--RALIRAVKELEED 529
LC K+ A LL +M + GL + +T R + EL E+
Sbjct: 420 LC-KSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEE 462
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/279 (18%), Positives = 103/279 (36%), Gaps = 38/279 (13%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
++L+ C E L D +K G V ++N + + G + F++ +
Sbjct: 546 NSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNG----YCEEGDMHSMFDMLH 601
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ Q TY ++ L + + + + M G PD +I FCK
Sbjct: 602 EMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAH 661
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ--------------EDETVKL------ 321
++A ++ + + P LI+ LC +D++++L
Sbjct: 662 DLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYT 721
Query: 322 --------------ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
AL + +I+ +S+VI LC+ + AK M++
Sbjct: 722 TIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTH 781
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
G PP + +++A+ ++GD E+ +M GL P
Sbjct: 782 GIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 820
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 76/171 (44%), Gaps = 4/171 (2%)
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
R + VH A +L+KM A +NS++ M ++ +++ G+ + Y
Sbjct: 180 RAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIM---WDVYNEIKASGVPQNEY 236
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
T L+ G ++++A L E S V+++ L+ G+CK+ D A M
Sbjct: 237 TNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMM 296
Query: 470 KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
G+ P+V YN L+ LC+ A A + DM G+ + +T ++
Sbjct: 297 IKYGLLPDVYSYNILLHGLCV-AGSMEEALEFTNDMENHGVEPDIVTYNIL 346
>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 643
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 6/285 (2%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
+Y + AL R +SV M+ G P+ I+ FCK G+ + A + LA
Sbjct: 226 SYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAI--LA 283
Query: 294 REKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRM 351
R +VV F L+ L +D V ALDM E + ++ +IR LC +
Sbjct: 284 RMVITGCTPNVVTFTALVRGL-FDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSV 342
Query: 352 KDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTY 411
D+ GA ++L+ M G P ++++I +SKAGD+ A+ + M G KP+V Y
Sbjct: 343 GDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVY 402
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
T ++ + +A ++++ + + VT++TLIR C AL + +EM+
Sbjct: 403 TNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRR 462
Query: 472 VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
G PN YN+LI L + + A ++ +M+ G+ L+ +T
Sbjct: 463 HGCVPNGRTYNELIHGL-FREGNCGDALHMVTEMQSHGIELSLVT 506
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 141/310 (45%), Gaps = 8/310 (2%)
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
A V++ G N TY + AL + A + ++M G PD I+
Sbjct: 142 AVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIV 201
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR 334
S CK + EA V M P + ++ +LC+E ++ ++ D G
Sbjct: 202 SVLCKLDRLDEATEVLA-----AMPPVAASYNAIVLALCREFR-MQEVFSVVSDMVGRGL 255
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
+ + +++++ + C+ ++ A +L++M+ G P F +++ G + A++
Sbjct: 256 QPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALD 315
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
M + M + G P +Y L+ G + G ++ A ILN +++ + TY TLI G+
Sbjct: 316 MWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFS 375
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG 514
K + A+ + N+M G +PNV Y ++ C K L + A+ L++ M L+ N
Sbjct: 376 KAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFC-KKLMFNQAKSLIDKMLLENCPPNT 434
Query: 515 IT-RALIRAV 523
+T LIR++
Sbjct: 435 VTFNTLIRSL 444
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 160/367 (43%), Gaps = 18/367 (4%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEK-EKGVLTVEILNELIALFSKLGKGKAAFEVF 220
+A++ A+C +EV+++ + +G + V+T ++ F K G+ + A +
Sbjct: 228 NAIVLALCREFRMQEVFSV--VSDMVGRGLQPNVIT---YTTIVDAFCKAGELRMACAIL 282
Query: 221 NKFGDYGCVANQETYYFTIEAL-SRRKIFD----WAWSVCEKMIETGSLPDSEKVGKIIS 275
+ GC N T+ + L ++ D W W M+ G P + +I
Sbjct: 283 ARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRW-----MVAEGWAPSTVSYNILIR 337
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
C G K A + + +P + LI + + + A+ + +D S K
Sbjct: 338 GLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGD-LGGAISIWNDMSRSGCK 396
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+ +++++ C+ + AK+L+ KM+ E PP FN++I + + A+ +
Sbjct: 397 PNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGV 456
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
MR G P+ TY L+ G G +A ++ E + + LS VTY+T++ G C+
Sbjct: 457 FHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQ 516
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
A+ + +M G+QPN ++ +I + C K + R A +L M + H N +
Sbjct: 517 TRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYC-KEGEVRMAAWMLGAMNVVNCHRNIL 575
Query: 516 TRALIRA 522
++ A
Sbjct: 576 VYTILMA 582
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 96/244 (39%), Gaps = 31/244 (12%)
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
PP S+ C + V + + D+ + + ++ ++R+LC+ V A+
Sbjct: 121 PPSRGSTTTSSTRCCGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARK 180
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR------------------- 400
+L +M +G PP + + +++S K + A E+L M
Sbjct: 181 MLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRM 240
Query: 401 -----------SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
RGL+P+V TYT ++ + G++ AC IL + VT+ L
Sbjct: 241 QEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTAL 300
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
+RG AL + M G P+ YN LI+ LC D + A +L M G
Sbjct: 301 VRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLC-SVGDLKGASSILNSMEQHG 359
Query: 510 LHLN 513
N
Sbjct: 360 CFPN 363
>gi|359481811|ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Vitis vinifera]
Length = 848
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 146/319 (45%), Gaps = 6/319 (1%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
E N LI + G+ + A + + ++ TY I A + A +VC+K
Sbjct: 198 ETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKK 257
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M E G PD ++S + +G + + + L + + P + + +I L + +
Sbjct: 258 MTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQ 317
Query: 318 TVKLALDMLDDFSGEARKYA---IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
K A+D+ + E R + F+++I + +T + M++EG P
Sbjct: 318 NGK-AIDIFNSMK-EKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIV 375
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
+N++I AY+ G A + ++ G PDV +YT L++ Y G+ E+A ++
Sbjct: 376 SYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELM 435
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
++NH + + V+Y+ LI Y A+++L+EM+ GVQPN+ L+ + C +
Sbjct: 436 RRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAA-CGRCGQ 494
Query: 495 WRTAEKLLEDMRLKGLHLN 513
+ +L L+G+ LN
Sbjct: 495 KVKIKSVLSAAELRGIKLN 513
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 145/343 (42%), Gaps = 4/343 (1%)
Query: 182 DIVKEIGEKEKGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIE 240
DI + EK V +I L+S G+ + FN G N +Y I
Sbjct: 323 DIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIG 382
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP 300
A + + A+SV ++ + G PD +++ + K GK ++A V+ L R P
Sbjct: 383 AYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKP 442
Query: 301 PQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTL 360
LI + + + A+++L + + I +++ + R K++
Sbjct: 443 NLVSYNALIDAYGSKGLLTE-AVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSV 501
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
LS G +NS I +Y G+ A+ + + MR++ +KPD TY L+SG
Sbjct: 502 LSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCK 561
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
+ EA L+E LS Y ++I Y K + A + +MK VG +P+V
Sbjct: 562 MSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVIT 621
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRA 522
Y +I + + A +W A L +M + + I +L+RA
Sbjct: 622 YTAMIHAYDV-AENWEKASALFLEMETDDVQPDSIACSSLMRA 663
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 146/344 (42%), Gaps = 6/344 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+AL+ A S KE +++++ +K+ G V +LN + K GK + A +VF
Sbjct: 378 NALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNA----YGKSGKPEKAMKVFE 433
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
C N +Y I+A + + A + +M G P+ + +++ + G
Sbjct: 434 LMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCG 493
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ + V + A + + + I S E K AL + + K +
Sbjct: 494 QKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDK-ALSLYRAMRTKKVKPDPVTY 552
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+ +I C+M A L +M+ P V++SVI AYSK G +T A M M+
Sbjct: 553 NVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKM 612
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G +PDV TYT ++ Y E+A + E + + + + +L+R + K +
Sbjct: 613 VGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAK 672
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
L L M++ + N + +++ S C +WR L++ M
Sbjct: 673 VLVLAEFMREKKIPFNNSSFFEMV-SACSLLREWREIIGLIKLM 715
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 129/325 (39%), Gaps = 36/325 (11%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI G K A V K + G + T+ + A R + S E M
Sbjct: 236 NNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKG 295
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL----ISSLCQED 316
T PD+ + +I K G+ +A ++ +EK+ VV F + S+C +
Sbjct: 296 TNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQI 355
Query: 317 ETVKLALDML--------------------------DDFS--GEARKYAIKP----FSSV 344
E + A + + + FS E +K P ++S+
Sbjct: 356 ENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSL 415
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
+ + + A + M P +N++I AY G +T A+E+L M G+
Sbjct: 416 LNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGV 475
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
+P++ + L++ GQ + +L+ A+ +L+ Y++ I Y + E+D AL
Sbjct: 476 QPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALS 535
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLC 489
L M+ V+P+ YN LI C
Sbjct: 536 LYRAMRTKKVKPDPVTYNVLISGCC 560
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 66/148 (44%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++ +IR R V A+ L +M P +N++I+A+ +AG AM ++ M
Sbjct: 165 YNMMIRLHARHNIVDQARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 224
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+ P TY L++ + G +EA + + +N VT++ ++ Y + ++
Sbjct: 225 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYS 284
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSL 488
L MK ++P+ N +I L
Sbjct: 285 KVLSYFELMKGTNIRPDTTTLNIVIYCL 312
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 98/236 (41%), Gaps = 1/236 (0%)
Query: 195 LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSV 254
L+ E+ + +I +SK G+ A +F K GC + TY I A + ++ A ++
Sbjct: 582 LSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASAL 641
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
+M PDS ++ F KGG+ + V+ REKK+ P + F + S C
Sbjct: 642 FLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKI-PFNNSSFFEMVSACS 700
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
+ + ++ +I + ++ L + + L K+++ G
Sbjct: 701 LLREWREIIGLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMKLFYKIVASGAEINFY 760
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
++ ++ AG+ +E+L+ M GL+P V Y + S N E A I
Sbjct: 761 TYSILLKNLLAAGNWRKYIEVLQWMEEAGLQPSVGMYRSISSFAQNRSGAEYAAVI 816
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 75/172 (43%), Gaps = 5/172 (2%)
Query: 321 LALDMLDDFSGEARK----YAIKPFSSVIRSLCRMKDV-HGAKTLLSKMISEGPPPGNAV 375
L L+ DD G + ++ K F +IR + ++ + H + + N +
Sbjct: 105 LKLNHWDDVEGLLNRWVGRFSRKNFPLLIREITQIGSLEHSVQVFRWMKNQKNYCARNDI 164
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N +I +++ + A + M+ KPD TY L++ + GQ A I+++
Sbjct: 165 YNMMIRLHARHNIVDQARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 224
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
+ S TY+ LI + AL + +M + GV P++ +N ++ +
Sbjct: 225 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSA 276
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 134/305 (43%), Gaps = 2/305 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI +S+LG A +F++ V + TY I+ R D A + + MI+
Sbjct: 351 NTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIK 410
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD ++ FC+ G A ++ + + P I + K
Sbjct: 411 HGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSK 470
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A M ++ E + ++ +I LC++ + A L+ KM EG P + + S+I
Sbjct: 471 -AFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSII 529
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
A+ +G + A E+ M +G+ P V TYT L+ YA G+++ A + +E +
Sbjct: 530 HAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVS 589
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+ +TY+ LI G CK D A L EM+ GV PN Y LI W+ A K
Sbjct: 590 PNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENS-NLQYWQDALK 648
Query: 501 LLEDM 505
L +DM
Sbjct: 649 LYKDM 653
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 145/355 (40%), Gaps = 37/355 (10%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI F K + A ++ + G + TY + +L R A + M+
Sbjct: 281 NPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVN 340
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
+PD +I + + G EA ++++ R K + P LI C+ +
Sbjct: 341 EDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTG-NLD 399
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS-------------- 366
+A M DD + F+ ++R C+M ++ AK L +M+S
Sbjct: 400 IAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRI 459
Query: 367 ---------------------EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
EG PP +N +I+ K G+ A E+++ MR G+
Sbjct: 460 VGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIV 519
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
PD TYT ++ + G + +A E+ ++ K S VTY LI Y D A K
Sbjct: 520 PDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKY 579
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
+EM+D GV PNV YN LI LC + + A L +M KG+ N T ++
Sbjct: 580 FDEMQDKGVSPNVITYNALIYGLCKENM-MDVAYNLFAEMESKGVSPNKYTYTIL 633
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 190/438 (43%), Gaps = 30/438 (6%)
Query: 111 LQSSVDGYLESSLDSFELDLHEDFVLKVLETPLVLGENLVCFFKWV--------TSGVVD 162
+ +SV+ + S++ E F+L+VL + + FF+WV +
Sbjct: 36 IDNSVNPHFHSAVTQPE------FLLRVLNSVKHRPLTALRFFRWVEKQPNFHRSETAFV 89
Query: 163 ALLKAICSSVGKKEVY-------------ALWDIVKEIGEKEKGVLTVEILNELIALFSK 209
A+L + + K Y + D++ IG ++V++L+ LI +F+K
Sbjct: 90 AILDILAKNGFMKPAYWVMEKAIEVKVDGGVLDVLVGIGCGRNSEVSVKLLDLLIQVFAK 149
Query: 210 LGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEK 269
+ VF K + G + + ++ L + + + V MI+ P
Sbjct: 150 KLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVT 209
Query: 270 VGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDF 329
++ CK G+ A V + R P L++ L + E + A ++++
Sbjct: 210 FNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDR-AKELIEQM 268
Query: 330 SGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
S K + ++ +IR C+ + A L +M+ G P +N+++ + + G +
Sbjct: 269 SMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRV 328
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
+ A L +M + L PD+ +Y L+ GY+ G EA + +E + + S VTY+TL
Sbjct: 329 SDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTL 388
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
I G C+ D A + ++M G+ P+V + L++ C + + A++L ++M +G
Sbjct: 389 IDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFC-QMGNLPMAKELFDEMLSRG 447
Query: 510 LHLNGITRALIRAVKELE 527
L + I R V EL+
Sbjct: 448 LKPDCIAYT-TRIVGELK 464
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 117/276 (42%), Gaps = 23/276 (8%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYG----CVANQETYYFTIEALSRRKIFD--WAWSVCE 256
L+ F ++G A E+F++ G C+A +T + K+ + A+ + E
Sbjct: 423 LVRGFCQMGNLPMAKELFDEMLSRGLKPDCIA------YTTRIVGELKLGNPSKAFGMKE 476
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQ----SVV-AFLISS 311
+M G PD +I+ CK G +A+ + R + + P S++ A LIS
Sbjct: 477 EMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISG 536
Query: 312 LCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
L ++ E V D + ++ ++ +I S + AK +M +G P
Sbjct: 537 LLRKAEEV------FSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSP 590
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+N++I K M A + M S+G+ P+ YTYT L++ +N ++A ++
Sbjct: 591 NVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLY 650
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
+ + T+ L++ K + L+L N
Sbjct: 651 KDMLDREIKPDSCTHSALMKHLSKDYKLLAVLRLEN 686
>gi|449480434|ref|XP_004155892.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Cucumis sativus]
Length = 638
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 162/365 (44%), Gaps = 14/365 (3%)
Query: 161 VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVF 220
++ ++ +C +E +D++KE G + VE N K G+ ++++
Sbjct: 194 LENYIRCVCEGGLVEEAVYTFDMLKEAGYRP----YVETWNFAFQSCLKFGRTDLIWKLY 249
Query: 221 NKFGDYGCV--ANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+ G + ET + I+A A+ + + +E G P ++ K+IS FC
Sbjct: 250 EGMMETGVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFC 309
Query: 279 KGGKAKEAHVVYTLARE---KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
K K H V L K P +I+ C+ T++ A ++ +
Sbjct: 310 K---EKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQ-AFEVFNALKDRGYA 365
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+ ++++I C+M + A L +MI +G P +N++I + K G++ AM++
Sbjct: 366 PDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKL 425
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
K M G K + L+ G G+ +EA + E + +TY+TLI+G+C+
Sbjct: 426 YKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCR 485
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
+ + LL E++ G+QP+ Y LIQ LC + + A+++ DM +GL
Sbjct: 486 EGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLC-QLGSVQEAKEMWNDMHNRGLQPMVC 544
Query: 516 TRALI 520
TR I
Sbjct: 545 TRDHI 549
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 5/228 (2%)
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISS---LCQEDETVKL 321
P+ + I C+GG +EA + + +E P F S + D KL
Sbjct: 189 PEPASLENYIRCVCEGGLVEEAVYTFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIWKL 248
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
M++ +G + I+ +I++ C V A +L + + +G P N FN +IS
Sbjct: 249 YEGMME--TGVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLIS 306
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
+ K + +E++ M + PD++TY +++G+ +A E+ N K
Sbjct: 307 GFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAP 366
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
V Y TLI G+CK+ + + A KL EM D G PN YN LI C
Sbjct: 367 DMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFC 414
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 160/369 (43%), Gaps = 20/369 (5%)
Query: 169 CSSVGKKEVYALWDIVKEIGEKEKGV---LTVEILNELIALFSKLGKGKAAFEVFNKFGD 225
C G+ ++ +W + + G E GV + +E + LI F K A+E+ + +
Sbjct: 236 CLKFGRTDL--IWKLYE--GMMETGVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLE 291
Query: 226 YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKE 285
G + + I + K + MI PD +II+ FCK +
Sbjct: 292 DGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQ 351
Query: 286 AHVVYTLAREKKMYPPQSVVAFLISSLC---QEDETVKLALDMLDDFSGEARKYAIKPFS 342
A V+ +++ P + LI C Q ++ KL +M+D +Y+ ++
Sbjct: 352 AFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDK-GFLPNEYS---YN 407
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
++I C++ ++ A L KM+ G N++I G A + + M +
Sbjct: 408 TLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCK 467
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
+ DV TY L+ G+ G++ ++ ++L E + + S +Y LI+ C+L A
Sbjct: 468 NIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEA 527
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLC-----LKALDWRTAEKLLEDMRLKGLHLNGITR 517
++ N+M + G+QP V + +I LC ++ ++W L +++ + + +
Sbjct: 528 KEMWNDMHNRGLQPMVCTRDHIISGLCEQGYVVEGMEWLIT-MLKSNLKPQKETFYKLIQ 586
Query: 518 ALIRAVKEL 526
+LI+ KEL
Sbjct: 587 SLIQIGKEL 595
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 123/292 (42%), Gaps = 6/292 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKG--VLTVEILNELIALFSKLGKGKAAFEV 219
DA K I +K + + ++V + K + + T + E+I F K AFEV
Sbjct: 299 DAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIFTYQ---EIINGFCKNWMTLQAFEV 355
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
FN D G + Y I + + A + +MI+ G LP+ +I FCK
Sbjct: 356 FNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCK 415
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
G EA +Y + LI LC T + A D + + +
Sbjct: 416 IGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDE-AYDFFREMPCKNIVCDVI 474
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
++++I+ CR V + LL ++ ++G P + + +I + G + A EM M
Sbjct: 475 TYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDM 534
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
+RGL+P V T ++SG G + E E L K++ + T++ LI+
Sbjct: 535 HNRGLQPMVCTRDHIISGLCEQGYVVEGMEWLITMLKSNLKPQKETFYKLIQ 586
>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 161/353 (45%), Gaps = 27/353 (7%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
L+K C + KE D V +G V ++N L K+G+ +AA ++ +
Sbjct: 146 TLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGL----CKIGETRAALQMLRQ 201
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ Y I+ L + K+ + A+ + +MI P + +I +C G+
Sbjct: 202 IEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQ 261
Query: 283 AKEAHVVYTLARE---KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
KEA + L RE K + P L+ +LC+E + +K A + E +
Sbjct: 262 FKEA---FGLLREMVLKNINPDVYTFNILVDALCKEGK-IKEAKSGIAVMMKEGVMPDVV 317
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
+SS++ C + +V+ AK V++ VI+ + K + A+ + M
Sbjct: 318 TYSSLMDGYCLVNEVNKAK---------------HVYSIVINGFCKIKMVDKALSLFYEM 362
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
R R + PD TY L+ G G++ A E+++E + + +TY++LI CK
Sbjct: 363 RCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHV 422
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
D A+ L+ ++KD G+Q ++ YN LI LC K + A+ + +D+ +KG +L
Sbjct: 423 DKAIALVKKIKDQGIQLDMYTYNILIDGLC-KQGRLKDAQVIFQDLLIKGYNL 474
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 129/280 (46%), Gaps = 22/280 (7%)
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
+A+S+ K+++ G P++ + ++ FC K KEA + + Q LI
Sbjct: 124 FAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLI 183
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
+ LC+ ET + AL ML G+ + +S++I LC+ K V+ A L S+MI++
Sbjct: 184 NGLCKIGET-RAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRI 242
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
P NS+I Y G A +L+ M + + PDVYT+ L+ G+++EA
Sbjct: 243 SPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKS 302
Query: 430 ILNEAKKNHSRLSPVTYHTL--------------------IRGYCKLEEFDCALKLLNEM 469
+ K VTY +L I G+CK++ D AL L EM
Sbjct: 303 GIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEM 362
Query: 470 KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
+ + P+ YN LI LC K+ A +L+++MR G
Sbjct: 363 RCRRIAPDTVTYNSLIDGLC-KSGRISYAWELVDEMRDSG 401
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 144/340 (42%), Gaps = 31/340 (9%)
Query: 154 KWVTSGVV--DALLKAICSSVGKKEVYALWD--IVKEIGEKEKGVLTVEILNELIALFSK 209
K V++ VV ++ +C + Y L+ I K I TV LN LI +
Sbjct: 205 KLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISP------TVVTLNSLIYGYCI 258
Query: 210 LGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEK 269
+G+ K AF + + + T+ ++AL + A S M++ G +PD
Sbjct: 259 VGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVT 318
Query: 270 VGKIISWFCKGGKAKEAHVVYTLA--------------------REKKMYPPQSVVAFLI 309
++ +C + +A VY++ R +++ P LI
Sbjct: 319 YSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLI 378
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
LC+ + A +++D+ + I ++S+I +LC+ V A L+ K+ +G
Sbjct: 379 DGLCKSGR-ISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGI 437
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
+N +I K G + A + + + +G V+TYT +++G G + EA
Sbjct: 438 QLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAET 497
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
+L++ + N VT T+IR + ++ + A KLL EM
Sbjct: 498 LLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLREM 537
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%)
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
++ F ++ SL ++K +L ++ G P + +I+ Y G M A +
Sbjct: 70 SVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSIF 129
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
+ G P+ T T L+ G+ +++EA + + V+Y TLI G CK+
Sbjct: 130 AKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCKI 189
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
E AL++L +++ V +V Y+ +I LC
Sbjct: 190 GETRAALQMLRQIEGKLVSTDVVMYSTIIDGLC 222
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 101/227 (44%), Gaps = 6/227 (2%)
Query: 288 VVYTLAREKKMYPPQSVVAF--LISSLCQ-EDETVKLALDMLDDFSGEARKYAIKPFSSV 344
+V + R + P SV+ F ++SSL + + ++L +F+G K I S +
Sbjct: 55 LVSSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNG--IKPNIVSLSIL 112
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
I C + + A ++ +K++ G P +++ + + A+ + + G
Sbjct: 113 INCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGF 172
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
+ +Y L++G G+ A ++L + + V Y T+I G CK + + A +
Sbjct: 173 HFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYE 232
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH 511
L +EM + P V N LI C+ ++ A LL +M LK ++
Sbjct: 233 LYSEMITKRISPTVVTLNSLIYGYCIVG-QFKEAFGLLREMVLKNIN 278
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 82/198 (41%), Gaps = 1/198 (0%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
F K+ A +F + + TY I+ L + +AW + ++M ++G D
Sbjct: 346 FCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPAD 405
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
+I CK +A + +++ + LI LC++ +K A +
Sbjct: 406 IITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGR-LKDAQVIF 464
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
D + + ++ +I LC ++ A+TLLSKM G P ++I A +
Sbjct: 465 QDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFEN 524
Query: 387 GDMTPAMEMLKLMRSRGL 404
A ++L+ M +RGL
Sbjct: 525 DKNERAEKLLREMIARGL 542
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 142/289 (49%), Gaps = 7/289 (2%)
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLC 313
+M E G +PD+ ++ C G+++ A + +A ++ P +VV + ++ L
Sbjct: 163 HRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGLF 222
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
+E + V A D+ + + + + ++SVI +LC+ + V A+ +L +M+ G P N
Sbjct: 223 KEGK-VGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDN 281
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+N++I YS G A+ M K M SRG+ P+ T + ++ G++EEA E +
Sbjct: 282 VTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDS 341
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
+L+ ++Y TL+ GY L N M G+ PN +N L+ K
Sbjct: 342 MLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYA-KCG 400
Query: 494 DWRTAEKLLEDMRLKGLHLNGITR-ALIRAVKELE--EDAIENGEALVE 539
R A + EDM+ +GL+ + +T A+I A + +DA++ +++
Sbjct: 401 MVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMID 449
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 149/347 (42%), Gaps = 12/347 (3%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI +S LG+ K A +F + G + N T + L + + A + M+
Sbjct: 285 NTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLA 344
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G + ++ + G + ++ L + P Q V L++ + V+
Sbjct: 345 KGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCG-MVR 403
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A+ + +D + + +VI + CRM + A + MI +G P AV+ +I
Sbjct: 404 EAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLI 463
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ GD+ A E++ +R++GL P + ++ L++ G++ EA I + + +
Sbjct: 464 QGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEK 523
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+ +LI GYC + + A ++ + M VG++P++ Y L+ C K
Sbjct: 524 ADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNG-CCKNGRIDDGLI 582
Query: 501 LLEDMRLKGLHLNGITRALI----------RAVKELEEDAIENGEAL 537
L ++ KG+ T +I A KE+ ++ IE+G A+
Sbjct: 583 LFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAV 629
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 117/272 (43%), Gaps = 1/272 (0%)
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
+FN G V NQ + + ++ + A + E M + G PD +I F
Sbjct: 372 NLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAF 431
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
C+ G +A + +K + P +V LI C + VK A +++ + +
Sbjct: 432 CRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVK-AEELVYEIRNKGLGPC 490
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
I F+S+I LC+ V A+ + +I G +F S+I Y G M+ A +
Sbjct: 491 ILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHD 550
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M S G++PD+ TY L++G G++++ + E + + TY ++ G
Sbjct: 551 AMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAG 610
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A ++ EM + G+ + Y+ L+ LC
Sbjct: 611 RTAAAKEMFQEMIESGIAVTIPTYSILLTGLC 642
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 134/314 (42%), Gaps = 4/314 (1%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
+ N L+ ++K G + A +F G + TY I A R D A
Sbjct: 387 HVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNH 446
Query: 258 MIETGSLPDSEKVGKIISWFCKGGK-AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
MI+ G P+ +I FC G K +VY + R K + P A LI+ LC+E
Sbjct: 447 MIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEI-RNKGLGPCILSFASLINHLCKEG 505
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ A + D K + F+S+I C + + A + M+S G P +
Sbjct: 506 RVFE-AQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTY 564
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
++++ K G + + + + + +G+KP +TY ++ G + G+ A E+ E +
Sbjct: 565 GTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIE 624
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ ++ TY L+ G C+ + A+ + ++ + V+ ++ N +I + KA
Sbjct: 625 SGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKM-FKARRRE 683
Query: 497 TAEKLLEDMRLKGL 510
AE L + GL
Sbjct: 684 EAEGLFASIPDYGL 697
>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
Length = 475
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 134/284 (47%), Gaps = 12/284 (4%)
Query: 233 ETYYFT--IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
+ Y+++ I A R A V ++ + G P+ G +I+ FCK G+ + A ++
Sbjct: 171 DVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLV 230
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVK-LALDMLDDFSG-EARKYAIKPFSSVIRSL 348
T + + + Q V +I C+++ K L + M+ + G E Y + +R
Sbjct: 231 TDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRA 290
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
RM + AK LL MI +G P + + ++IS + GDM A + + M G +P +
Sbjct: 291 NRMDE---AKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSL 347
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNE 468
TY +M GY G + EA NE +K +Y L+ G+C + D AL+L E
Sbjct: 348 VTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEE 407
Query: 469 MKDVGVQPNVDEYNKLIQSLCLKALDWRTAE--KLLEDMRLKGL 510
MK G +PN+ Y LI L A + R+ E +L ++M GL
Sbjct: 408 MKQRGSKPNLVAYTALISGL---AKEGRSEEAFQLYDNMLGDGL 448
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 124/283 (43%), Gaps = 16/283 (5%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
TY ++ LS + +V E+M D +I+ +C+ G + A V+
Sbjct: 139 TYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDEC 198
Query: 294 REKKMYPPQSVVAFLISSLC---QEDETVKLALDMLDDFSGEARKYAIKP--FSSVIRSL 348
+ P + LI+ C Q + L DM + R I F+++I
Sbjct: 199 VGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDM------QVRGVGINQIVFNTMIDGY 252
Query: 349 CRMKDVHGAKTLLSKMISE--GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
CR V K L KMI E G +N++ +A M A +L++M +G++P
Sbjct: 253 CRKNMVD--KALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRP 310
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
+ +YT L+S + N G M EA + E N + S VTY+ ++ GY K A +
Sbjct: 311 NHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFK 370
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
NEM+ G+ P++ Y L+ C+ A +L E+M+ +G
Sbjct: 371 NEMEKKGLVPDIYSYAALVHGHCVNG-KVDVALRLFEEMKQRG 412
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 133/304 (43%), Gaps = 2/304 (0%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
+ K G+ A ++ ++ +G N Y ++A +R K D + + M G P
Sbjct: 77 YCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPT 136
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
++ + V+ + K + + +I++ C+ V+ A ++
Sbjct: 137 VGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAG-NVRRASEVF 195
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
D+ G + + ++I C++ + A+ L++ M G VFN++I Y +
Sbjct: 196 DECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRK 255
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
+ A+E+ +M G++ DVYTY L G +M+EA +L + R + V+Y
Sbjct: 256 NMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSY 315
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
TLI +C + A +L EM G +P++ YN ++ +K R AE+ +M
Sbjct: 316 TTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGY-IKKGSIREAERFKNEME 374
Query: 507 LKGL 510
KGL
Sbjct: 375 KKGL 378
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 131/281 (46%), Gaps = 5/281 (1%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
TY I AL R A +V + M+ G P ++ CK K+A V+
Sbjct: 162 TYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEM 221
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
R K P LI+++C + + V AL +L+ K ++ V++SLC +
Sbjct: 222 RSKGCEPDIVTYNVLINAMCSQGD-VGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSER 280
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
A LL+KM S P FN+VI++ + G + A ++L M G PD+ TY+
Sbjct: 281 WEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSS 340
Query: 414 LMSGYANGGQMEEACEILNE--AKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEM 469
+M G +++EA ++L E A+ P VT++T+I C+ FD A+K+++EM
Sbjct: 341 IMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEM 400
Query: 470 KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+ G P++ YN ++ K+ A LL M GL
Sbjct: 401 SEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGL 441
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 136/329 (41%), Gaps = 8/329 (2%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
LL A C G K+ L D ++ G E ++T N LI G A +V N
Sbjct: 201 LLDATCKESGYKQAVVLLDEMRSKG-CEPDIVT---YNVLINAMCSQGDVGEALKVLNSL 256
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
YGC + TY +++L + ++ A + KM PD +I+ C+ G
Sbjct: 257 PSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFV 316
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKP 340
A V E P + ++ LC+E DE +KL ++L + +
Sbjct: 317 GRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVT 376
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAY-SKAGDMTPAMEMLKLM 399
F+++I SLC+ A ++ +M G P +N ++ + K+ A+++L LM
Sbjct: 377 FNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLM 436
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
S GL PD TY L G + +ME A + + + Y+ ++ G CK
Sbjct: 437 VSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRT 496
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
D A+ M G P+ Y L++ +
Sbjct: 497 DLAIDFFAYMVSNGCMPDESTYIILVEGI 525
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 113/250 (45%), Gaps = 23/250 (9%)
Query: 256 EKMIETGSLPDSEKV-------GKIISW------FCKGGKAKEAHVV---YTLAREKKMY 299
+K+ G + D+E+V II++ +C+ G A + A + Y
Sbjct: 104 KKLCADGRVADAERVVEALGPSATIITYNTMVNGYCRAGNIDAARRMIDSVPFAPDTFTY 163
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P LI +LC V AL + DD ++ +S ++ + C+ A
Sbjct: 164 NP------LIRALCVRG-CVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVV 216
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
LL +M S+G P +N +I+A GD+ A+++L + S G KPD TYT ++
Sbjct: 217 LLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLC 276
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
+ + EEA ++L + N VT++ +I C+ A K+L +M + G P++
Sbjct: 277 SSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDII 336
Query: 480 EYNKLIQSLC 489
Y+ ++ LC
Sbjct: 337 TYSSIMDGLC 346
>gi|413950073|gb|AFW82722.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 620
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 6/285 (2%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
+Y + AL R +SV M+ G P+ I+ FCK G+ + A + LA
Sbjct: 203 SYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAI--LA 260
Query: 294 REKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRM 351
R +VV F L+ L +D V ALDM E + ++ +IR LC +
Sbjct: 261 RMVITGCTPNVVTFTALVRGL-FDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSV 319
Query: 352 KDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTY 411
D+ GA ++L+ M G P ++++I +SKAGD+ A+ + M G KP+V Y
Sbjct: 320 GDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVY 379
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
T ++ + +A ++++ + + VT++TLIR C AL + +EM+
Sbjct: 380 TNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRR 439
Query: 472 VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
G PN YN+LI L + + A ++ +M+ G+ L+ +T
Sbjct: 440 HGCVPNGRTYNELIHGL-FREGNCGDALHMVTEMQSHGIELSLVT 483
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 158/366 (43%), Gaps = 16/366 (4%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+A++ A+C +EV+++ + G + + I++ F K G+ + A +
Sbjct: 205 NAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDA----FCKAGELRMACAILA 260
Query: 222 KFGDYGCVANQETYYFTIEAL-SRRKIFD----WAWSVCEKMIETGSLPDSEKVGKIISW 276
+ GC N T+ + L ++ D W W M+ G P + +I
Sbjct: 261 RMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRW-----MVAEGWAPSTVSYNILIRG 315
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
C G K A + + +P + LI + + + A+ + +D S K
Sbjct: 316 LCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGD-LGGAISIWNDMSRSGCKP 374
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ +++++ C+ + AK+L+ KM+ E PP FN++I + + A+ +
Sbjct: 375 NVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVF 434
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
MR G P+ TY L+ G G +A ++ E + + LS VTY+T++ G C+
Sbjct: 435 HEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQT 494
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A+ + +M G+QPN ++ +I + C K + R A +L M + H N +
Sbjct: 495 RMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYC-KEGEVRMAAWMLGAMNVVNCHRNILV 553
Query: 517 RALIRA 522
++ A
Sbjct: 554 YTILMA 559
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 153/349 (43%), Gaps = 24/349 (6%)
Query: 190 KEKGVLTVE-ILNELIALFSKLGKGKAAFEVFNK-FGDYGCVANQETYYFTIEALSRRKI 247
+ +GV E L + F++ G A + F + D GC ++ RR
Sbjct: 82 RLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLGCARPHRAA--ALQPPHRRAA 139
Query: 248 FDWAWSVCE------------KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE 295
W++C+ +M G PD I+S CK + EA V
Sbjct: 140 AGRTWALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLA---- 195
Query: 296 KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVH 355
M P + ++ +LC+E ++ ++ D G + + +++++ + C+ ++
Sbjct: 196 -AMPPVAASYNAIVLALCREFR-MQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELR 253
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
A +L++M+ G P F +++ G + A++M + M + G P +Y L+
Sbjct: 254 MACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILI 313
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
G + G ++ A ILN +++ + TY TLI G+ K + A+ + N+M G +
Sbjct: 314 RGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCK 373
Query: 476 PNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAV 523
PNV Y ++ C K L + A+ L++ M L+ N +T LIR++
Sbjct: 374 PNVVVYTNMVDVFC-KKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSL 421
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 91/236 (38%), Gaps = 57/236 (24%)
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG--------- 387
A + + +R L DV G + L +M G P + + A+++AG
Sbjct: 54 AARAHEAAVRRLAAAGDVDGVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTF 113
Query: 388 -------------------------------------DMTPAMEMLKLMRSRGLKPDVYT 410
+ A +ML M +G PD T
Sbjct: 114 YRAVHDLGCARPHRAAALQPPHRRAAAGRTWALCQNNRVGAARKMLDEMARKGCPPDDVT 173
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV--TYHTLIRGYCKLEEFDCALKLLNE 468
Y ++S +++EA E+L + + PV +Y+ ++ C+ ++++
Sbjct: 174 YATIVSVLCKLDRLDEATEVL-------AAMPPVAASYNAIVLALCREFRMQEVFSVVSD 226
Query: 469 MKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAV 523
M G+QPNV Y ++ + C KA + R A +L M + G N +T AL+R +
Sbjct: 227 MVGRGLQPNVITYTTIVDAFC-KAGELRMACAILARMVITGCTPNVVTFTALVRGL 281
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 148/339 (43%), Gaps = 5/339 (1%)
Query: 181 WDIVKEIGEKEKGVLTVEIL---NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYF 237
+D+V +GE+ + + L N LI F + + A V K G + T
Sbjct: 96 FDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSS 155
Query: 238 TIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKK 297
+ K A ++ ++M+E G PD+ +I KA EA + ++
Sbjct: 156 LLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRG 215
Query: 298 MYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGA 357
P +++ LC+ + + LAL +L + + ++++I LC+ K + A
Sbjct: 216 CQPDLVTYGAVVNGLCKRGD-IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDA 274
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
L +KM ++G P +NS+IS G + A +L M R + P+V T++ L+
Sbjct: 275 FALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDA 334
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
+ G++ EA ++ +E K TY +LI G+C + D A + M PN
Sbjct: 335 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 394
Query: 478 VDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
V YN LI+ C KA +L +M +GL N +T
Sbjct: 395 VVTYNTLIKGFC-KAKRVEEGMELFREMSQRGLVGNTVT 432
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 143/335 (42%), Gaps = 3/335 (0%)
Query: 189 EKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
EK K V I N +I K AF +FNK G + TY I L +
Sbjct: 247 EKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRW 306
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
A + MIE P+ +I F K GK EA +Y ++ + P + L
Sbjct: 307 SDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
I+ C D + A M + + + ++++I+ C+ K V L +M G
Sbjct: 367 INGFCMHDR-LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 425
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
+N++I +AGD A ++ K M S G+ PD+ TY+ L+ G G++E+A
Sbjct: 426 LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 485
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ +K+ TY+ +I G CK + + L + GV+PNV Y +I
Sbjct: 486 VVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGF 545
Query: 489 CLKALDWRTAEKLLEDMRLKG-LHLNGITRALIRA 522
C K L A+ L +M+ G L +G LIRA
Sbjct: 546 CRKGLK-EEADALFREMKEDGTLPDSGCYNTLIRA 579
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 143/295 (48%), Gaps = 14/295 (4%)
Query: 240 EALSRRKIF----DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA-R 294
E LSR + D A + +M+++ LP + K++S K K+ +V +L R
Sbjct: 49 EKLSRNALLNLKLDDAIGLFGEMVQSRPLPSIVEFNKLLSAI---AKMKKFDLVISLGER 105
Query: 295 EKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMK 352
+ + + ++ LI+ C+ + + LAL +L + I SS++ C K
Sbjct: 106 MQNLRISYDLYSYNILINCFCRRSQ-LPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSK 164
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT 412
+ A L+ +M+ G P FN++I + A+ ++ M RG +PD+ TY
Sbjct: 165 RISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYG 224
Query: 413 GLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
+++G G ++ A +L + +K V Y+T+I G CK + D A L N+M+
Sbjct: 225 AVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETK 284
Query: 473 GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRA-VKE 525
G++P+V YN LI LC W A +LL +M + ++ N +T ALI A VKE
Sbjct: 285 GIRPDVFTYNSLISCLCNYG-RWSDASRLLSNMIERKINPNVVTFSALIDAFVKE 338
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 1/221 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI F K + + E+F + G V N TY I+ L + D A + +KM+
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 458
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD ++ CK GK ++A VV+ ++ KM P +I +C+ + V+
Sbjct: 459 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK-VE 517
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
D+ S + K + ++++I CR A L +M +G P + +N++I
Sbjct: 518 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLI 577
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG 421
A + GD + E++K MRS G D T + +++ +G
Sbjct: 578 RARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDG 618
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/364 (19%), Positives = 145/364 (39%), Gaps = 40/364 (10%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
+ + ++ +C + +AL++ ++ G + V N LI+ G+ A +
Sbjct: 257 IYNTIIDGLCKYKHIDDAFALFNKMETKGIRPD----VFTYNSLISCLCNYGRWSDASRL 312
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
+ + N T+ I+A + A + ++MI+ PD +I+ FC
Sbjct: 313 LSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 372
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
+ EA ++ L K +P LI C+ + V+ +++ + S
Sbjct: 373 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA-KRVEEGMELFREMSQRGLVGNTV 431
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF----------------------- 376
++++I+ L + D A+ + KM+S+G PP +
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491
Query: 377 ------------NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
N +I KAG + ++ + +G+KP+V YT ++SG+ G
Sbjct: 492 QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 551
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
EEA + E K++ + Y+TLIR + + + +L+ EM+ G + + +
Sbjct: 552 EEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMV 611
Query: 485 IQSL 488
I L
Sbjct: 612 INML 615
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 125/273 (45%), Gaps = 6/273 (2%)
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
FN G VAN + I+A ++R + D A + +M G PD +IS C+
Sbjct: 279 FNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCR 338
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK---LALDMLDDFSGEARKY 336
G+ +A + + P V LI C + VK L +M+++ G R
Sbjct: 339 MGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNN--GIPRP- 395
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
I F+S++ S+C+ V A + + G +FN++I Y G+M A +L
Sbjct: 396 NIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVL 455
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
M S G+ PD +TY L++GY G++++ + E + + VTY+ ++ G +
Sbjct: 456 DAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRA 515
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A K+L+EM G ++ YN +++ LC
Sbjct: 516 GRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLC 548
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 118/257 (45%), Gaps = 4/257 (1%)
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEA-HVVYTLAREKKMYPPQSVV-AFLISSLC 313
+M E G +PD+ ++ C ++++A ++ +A+E+ + P V +I
Sbjct: 68 RRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFF 127
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
+E + K A ++ + + + +S+I +LC+ + V A+ LL +M+ G PP
Sbjct: 128 KEGKIGK-ACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNK 186
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+ S+I YS G A +M + M RGL PD+ ++ M G+ +EA EI
Sbjct: 187 VTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYS 246
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
R + VTY L+ GY F + N MK G+ N + LI + + +
Sbjct: 247 MAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGM 306
Query: 494 DWRTAEKLLEDMRLKGL 510
A +L +M+ +GL
Sbjct: 307 -MDEAMLILSEMQGQGL 322
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 134/293 (45%), Gaps = 6/293 (2%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+ LI ++K G A + ++ G + TY I AL R A +M
Sbjct: 293 VFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQM 352
Query: 259 IETGSLPDSEKVGKIISWFCKGG---KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
I TG P++ +I FC G KAKE +VY + P + ++ S+C+E
Sbjct: 353 IGTGVQPNTVVYHSLIQGFCTHGDLVKAKE--LVYEMMNNGIPRPNIAFFNSIVHSICKE 410
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ A + D + I F+++I C + ++ A ++L MIS G P
Sbjct: 411 GRVMD-AHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFT 469
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N++++ Y K+G + + + + M + +KP TY ++ G G+ A ++L+E
Sbjct: 470 YNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMI 529
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ +S TY+ +++G C+ D A+ + ++ + V+ N+ N +I S+
Sbjct: 530 GCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSM 582
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 120/286 (41%), Gaps = 8/286 (2%)
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH 287
C + TY I + A ++ +M++ G +PD II+ CK A
Sbjct: 112 CSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAE 171
Query: 288 VVYTLAREKKMYPPQSVVAFLI---SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSV 344
++ + + P + +I S+L + +E K M + +G I ++S
Sbjct: 172 LLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATK----MFREMTGRGLIPDIVSWNSF 227
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
+ SLC+ A + M ++G P + ++ Y+ G M M+ G+
Sbjct: 228 MDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGI 287
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
+ +T L+ YA G M+EA IL+E + TY TLI C++ A+
Sbjct: 288 VANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVD 347
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
N+M GVQPN Y+ LIQ C D A++L+ +M G+
Sbjct: 348 KFNQMIGTGVQPNTVVYHSLIQGFCTHG-DLVKAKELVYEMMNNGI 392
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 171/383 (44%), Gaps = 82/383 (21%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEIL--NELIALFSKLGKGKAAFEVFN 221
+LK +C ++ L ++ KE+GV + +++ N +I F K GK A +++
Sbjct: 85 VLKRLCDDNRSQQALDLLRMM----AKEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYH 140
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDS-------------- 267
+ G V + T+ I AL + + D A + +M++ G P+
Sbjct: 141 EMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLG 200
Query: 268 ----------EKVGK-----IISW------FCKGGKAKE-AHVVYTLAREKKMYPPQSVV 305
E G+ I+SW CK G++KE A + Y++A K + P ++V
Sbjct: 201 RWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMA--AKGHRP-NIV 257
Query: 306 AFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI 365
+ I +L ++ E F+ ++ + + M
Sbjct: 258 TYGI---------------LLHGYATEG------CFADMM-------------SFFNTMK 283
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
+G VF +I AY+K G M AM +L M+ +GL PDV+TY+ L+S G++
Sbjct: 284 GDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLA 343
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV-QPNVDEYNKL 484
+A + N+ + + V YH+LI+G+C + A +L+ EM + G+ +PN+ +N +
Sbjct: 344 DAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSI 403
Query: 485 IQSLCL--KALDWRTAEKLLEDM 505
+ S+C + +D L++D+
Sbjct: 404 VHSICKEGRVMDAHHIFDLVKDI 426
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 4/183 (2%)
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME-M 395
I + V+ CR + +++ G N+V+ A++ +
Sbjct: 7 TIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVL 66
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGY 453
L+ M G PD ++Y ++ + + ++A ++L K SP VTY+T+I G+
Sbjct: 67 LRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGF 126
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
K + A L +EM G P+V +N +I +LC KA AE LL M G+ N
Sbjct: 127 FKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALC-KARAVDNAELLLRQMVDNGVPPN 185
Query: 514 GIT 516
+T
Sbjct: 186 KVT 188
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/293 (19%), Positives = 115/293 (39%), Gaps = 44/293 (15%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
++++ +IC + + ++D+VK+IGE+ ++ FN
Sbjct: 401 NSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIM------------------------FN 436
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
D C+ + A+SV + MI G PD+ +++ + K G
Sbjct: 437 TLIDGYCLVGE---------------MGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSG 481
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ + ++ +KK+ P ++ L + TV A ML + G ++ +
Sbjct: 482 RIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVA-AQKMLHEMIGCGTTVSLPTY 540
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+ +++ LCR A + K+ + N++I++ A ++ +
Sbjct: 541 NIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISD 600
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH----SRLSPVTYHTLI 450
GL P+ TY ++ G +EEA + + +K+ SRL T TL+
Sbjct: 601 SGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLL 653
>gi|115445813|ref|NP_001046686.1| Os02g0321000 [Oryza sativa Japonica Group]
gi|113536217|dbj|BAF08600.1| Os02g0321000 [Oryza sativa Japonica Group]
Length = 542
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 135/294 (45%), Gaps = 12/294 (4%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+ ++ G+ A + F++ G N + I+ +RR FD AW + K
Sbjct: 102 NTLVNALAEAGREGEALKAFDEMLASGVAPNASSQNILIKMHARRSEFDLAWELIHK--- 158
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
+G PD +I+ C+ GK EA V EK P ++ + C++ V+
Sbjct: 159 SGVEPDVGTYSTLIAGLCRAGKIVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVE 218
Query: 321 LALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
L M E + P ++ +IR+LC + +L + ++ P +
Sbjct: 219 AKLLM-----AEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTY 273
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N ++ K G A+E+L +M GL+P YT++ L++ + ++ +A +L + +
Sbjct: 274 NIYMNGLCKKGKAKEALELLDVMLGEGLEPTAYTWSILLNCLCHSSRLLDAIYLLERSTE 333
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
V Y+T++ C++ ++ +KLL +M G++PN +N LI+SLC+
Sbjct: 334 LKWYAGVVAYNTVMSSLCEMGKWRGIMKLLTDMIKKGIEPNTRTFNILIRSLCV 387
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 135/305 (44%), Gaps = 10/305 (3%)
Query: 159 GVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFE 218
G L+ +C + GK + W ++ + EK + V+ ++ + + G+ A
Sbjct: 166 GTYSTLIAGLCRA-GK--IVEAWGVLDWMLEKNCRPM-VQTYTPIVQAYCRDGRIVEAKL 221
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+ + GC+ N TY I AL FD V + P + ++ C
Sbjct: 222 LMAEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNGLC 281
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA- 337
K GKAKEA + + + + P + L++ LC + A+ +L+ S E + YA
Sbjct: 282 KKGKAKEALELLDVMLGEGLEPTAYTWSILLNCLCHSSRLLD-AIYLLER-STELKWYAG 339
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+ +++V+ SLC M G LL+ MI +G P FN +I + G + A
Sbjct: 340 VVAYNTVMSSLCEMGKWRGIMKLLTDMIKKGIEPNTRTFNILIRSLCVGGKSSLAKS--- 396
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
L+ S G +V TY L+ + G++ EA +++ ++ + VTY +I G C+
Sbjct: 397 LIHSLGFAANVVTYNILLHWFYYHGKLTEANRLISVMEEKNIAPDEVTYTIIIDGLCRER 456
Query: 458 EFDCA 462
+FD A
Sbjct: 457 KFDAA 461
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 32/154 (20%)
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAM----EML--------------------------- 396
G PP +N++++A ++AG A+ EML
Sbjct: 93 GAPPNVLCYNTLVNALAEAGREGEALKAFDEMLASGVAPNASSQNILIKMHARRSEFDLA 152
Query: 397 -KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
+L+ G++PDV TY+ L++G G++ EA +L+ + + R TY +++ YC+
Sbjct: 153 WELIHKSGVEPDVGTYSTLIAGLCRAGKIVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCR 212
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A L+ EM+ +G PNV YN LI++LC
Sbjct: 213 DGRIVEAKLLMAEMERLGCLPNVVTYNVLIRALC 246
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 1/153 (0%)
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P ++++I+ +AG + A +L M + +P V TYT ++ Y G++ EA
Sbjct: 160 GVEPDVGTYSTLIAGLCRAGKIVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEA 219
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
++ E ++ + VTY+ LIR C ++FD ++L E +P+ YN +
Sbjct: 220 KLLMAEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNG 279
Query: 488 LCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
LC K + A +LL+ M +GL T +++
Sbjct: 280 LCKKG-KAKEALELLDVMLGEGLEPTAYTWSIL 311
>gi|255660836|gb|ACU25587.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 418
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 134/280 (47%), Gaps = 4/280 (1%)
Query: 239 IEALSRRKIFDWAWSVCEKMIET--GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREK 296
I+ + RK D A +V E ++E D +I+ + + G +A + L RE
Sbjct: 36 IQIVVSRKGKDSASAVFEAILEAKGAQRSDVYVFSGLITAYLESGFLHDALECFRLTREH 95
Query: 297 KMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHG 356
K + P ++ + + KL + ++ F+ ++ C+ ++
Sbjct: 96 KFWVPFDTCRKVLEHF-MKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRL 154
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A+++ ++ G P FN++++ Y + GD+ + M + G++PDVYTY+ L++
Sbjct: 155 AQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLIN 214
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
G +M +A E+ E N + VT+ TLI G+CK D A++ EM G P
Sbjct: 215 GLCKESKMNDANELFGEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMETYKEMLRQGFSP 274
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++ YN LI LC K D + A+ L+++M +KGL + IT
Sbjct: 275 DLITYNTLIYGLCKKG-DLKQAQDLIDEMSMKGLKPDKIT 313
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 162/387 (41%), Gaps = 51/387 (13%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
L++ + S GK A+++ + E ++ V + + LI + + G A E F
Sbjct: 35 LIQIVVSRKGKDSASAVFEAILEAKGAQRS--DVYVFSGLITAYLESGFLHDALECFRLT 92
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
++ +T +E + K F W ++++E G ++ FCK G+
Sbjct: 93 REHKFWVPFDTCRKVLEHFMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEM 152
Query: 284 KEAHVVYTLAREKKMYPPQSVVAF------------------------------------ 307
+ A V+ + + P SVV+F
Sbjct: 153 RLAQSVFDEITKWGLRP--SVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYS 210
Query: 308 -LISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLS 362
LI+ LC+E + ++ ++ GE + P F+++I C+ + A
Sbjct: 211 VLINGLCKESK-----MNDANELFGEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMETYK 265
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG 422
+M+ +G P +N++I K GD+ A +++ M +GLKPD TYT L+ G G
Sbjct: 266 EMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEG 325
Query: 423 QMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
+E A K + RL V Y LI G C+ + A K+L EM VG++P+ Y
Sbjct: 326 DLETALYYRKRMIKENIRLDDVAYTALISGLCREGQSVDAEKMLREMLSVGLKPDNGTYT 385
Query: 483 KLIQSLCLKALDWRTAEKLLEDMRLKG 509
+I C K D +T KLL++M+ G
Sbjct: 386 MIINEFCKKG-DVKTGSKLLKEMQRDG 411
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 128/299 (42%), Gaps = 2/299 (0%)
Query: 180 LWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI 239
+W KEI E ++ N L+ F K G+ + A VF++ +G + ++ +
Sbjct: 120 VWGFYKEILECGYPA-SLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLM 178
Query: 240 EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
R D + + M +G PD +I+ CK K +A+ ++ +
Sbjct: 179 NGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLV 238
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P LI C+ ++ LA++ + + + ++++I LC+ D+ A+
Sbjct: 239 PNGVTFTTLIDGHCKTG-SIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQD 297
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
L+ +M +G P + ++I K GD+ A+ K M ++ D YT L+SG
Sbjct: 298 LIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGLC 357
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
GQ +A ++L E + TY +I +CK + KLL EM+ G P V
Sbjct: 358 REGQSVDAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMQRDGHVPCV 416
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 1/208 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K K A E+F + G V N T+ I+ + D A ++M+ G
Sbjct: 212 LINGLCKESKMNDANELFGEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMETYKEMLRQG 271
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD +I CK G K+A + K + P + LI C+E + ++ A
Sbjct: 272 FSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGD-LETA 330
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
L E + ++++I LCR A+ +L +M+S G P N + +I+
Sbjct: 331 LYYRKRMIKENIRLDDVAYTALISGLCREGQSVDAEKMLREMLSVGLKPDNGTYTMIINE 390
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ K GD+ ++LK M+ G P V T
Sbjct: 391 FCKKGDVKTGSKLLKEMQRDGHVPCVVT 418
>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
Length = 987
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 8/298 (2%)
Query: 195 LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSV 254
L + LI K G+ A + ++ G V + TY I+ + A +
Sbjct: 282 LNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGI 341
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
M + G PD +I C GGK EA + A + P LI+ C+
Sbjct: 342 KALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCK 400
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSL---CRMKDVHGAKTLLSKMISEGPPP 371
E + AL + + K ++ + +I L CR+K+ AK L++M + G P
Sbjct: 401 A-ERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKE---AKETLNEMFANGLAP 456
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+ S+I Y K G + A+E+ KLM G P+ +TY L+ G ++ +A ++
Sbjct: 457 NVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALI 516
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ +++ +TY TLI+G CK EFD A +L M+ G+ P+ YN L +LC
Sbjct: 517 TKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALC 574
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 130/297 (43%), Gaps = 17/297 (5%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A + + G V + + Y + +L R + ++ + +++ G LPD+ +I
Sbjct: 128 AIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIM 187
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA--LDMLDDFSGEA 333
+CK G AH + L RE M L+ C+ + K L M+
Sbjct: 188 AYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRR 247
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
+Y+ ++ +I+ LC + V A L+ M+ +G + +I K G + A
Sbjct: 248 NEYS---YTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDAR 304
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
+L M RG+ P V+TY ++ GY G+M++A I ++N TY++LI G
Sbjct: 305 GLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGL 364
Query: 454 C--KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLK 508
C KL+E A +LLN G P V + LI C AE++ + +R+K
Sbjct: 365 CGGKLDE---AEELLNGAIARGFTPTVITFTNLINGYC-------KAERIDDALRVK 411
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 117/271 (43%), Gaps = 4/271 (1%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A + K + G TY I+ ++ FD A+ + E M + G PD + +
Sbjct: 512 AMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTD 571
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
CK G+A+EA Y+ K + + L+ + T A +++ E K
Sbjct: 572 ALCKSGRAEEA---YSFLVRKGVVLTKVTYTSLVDGFSKAGNT-DFAAVLIEKMVNEGCK 627
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+ +S ++++LC+ K ++ A ++L +M G + +IS K G A +
Sbjct: 628 ADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSL 687
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
M S G KP TYT +S Y G++EEA ++ E +++ VTY+ I G
Sbjct: 688 FNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGH 747
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
+ D A L M D +PN Y L++
Sbjct: 748 MGYIDRAFSTLKRMVDASCEPNCWTYWLLLK 778
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 158/365 (43%), Gaps = 35/365 (9%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGV-LTVEILNELIALFSKLGKGKAAFEVF 220
+ L A+C S +E Y+ +V+ KGV LT L+ FSK G A +
Sbjct: 567 NVLTDALCKSGRAEEAYSF--LVR------KGVVLTKVTYTSLVDGFSKAGNTDFAAVLI 618
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
K + GC A+ TY ++AL ++K + A S+ ++M +G + IIS K
Sbjct: 619 EKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKE 678
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
GK A ++ P + ISS C+ ++ + GE + + P
Sbjct: 679 GKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGR-----IEEAEHLIGEMERDGVTP 733
Query: 341 ----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF---------NSVISAY--SK 385
++ I M + A + L +M+ P + S+I+A+
Sbjct: 734 DVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDT 793
Query: 386 AG-----DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+G ++ ++L+ M GL P V TY+ +++G+ ++EEAC +L+
Sbjct: 794 SGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDIS 853
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+ Y LI+ C ++ F A+ + +M + G QP ++ Y+ LI LC + D+ A+
Sbjct: 854 PNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEG-DYDRAKS 912
Query: 501 LLEDM 505
L D+
Sbjct: 913 LFCDL 917
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 122/287 (42%), Gaps = 10/287 (3%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I + K+G AA EVF GC N TY I L + K A ++ KM E G
Sbjct: 464 IIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDG 523
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P +I CK + A ++ + + + P + L +LC+
Sbjct: 524 ITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAE--- 580
Query: 323 LDMLDDFSGEARKYAI---KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
+ +S RK + ++S++ + + A L+ KM++EG ++ +
Sbjct: 581 ----EAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVL 636
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+ A K + A+ +L M G+K ++ YT ++S G+ + A + NE +
Sbjct: 637 LQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGH 696
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
+ S TY I YCK+ + A L+ EM+ GV P+V YN I
Sbjct: 697 KPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFIN 743
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 103/231 (44%), Gaps = 5/231 (2%)
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDF---SGEARKYAIK 339
A A ++ LAR + +V +IS E V+ A+D + G+ + K
Sbjct: 87 ASHAALLQLLARRRAPANYDKLVLSMISC-SGTAEDVREAVDAIQAIRRVGGKRLVLSPK 145
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
++ +RSL R L S ++ EG P +N++I AY K G + A L+
Sbjct: 146 CYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLL 205
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
R G++ D YT L+ GY + +AC +L R + +Y LI+G C+
Sbjct: 206 RESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCV 265
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
AL L+ M G N+ Y LI+ LC K A LL++M L+G+
Sbjct: 266 REALVLVFMMVHDGCSLNLHTYTLLIKGLC-KEGRIHDARGLLDEMPLRGV 315
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 134/301 (44%), Gaps = 9/301 (2%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
L+ F K+G A E FN + G + + T I+A R + A ++ +M G
Sbjct: 471 LVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQG 530
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P+ +I+ CK K++ A ++ L ++ + P V + LI ++ + K
Sbjct: 531 IFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKAL 590
Query: 323 LDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+ K + P ++ +I LC + A L KM G P + S
Sbjct: 591 M-----LYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTS 645
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
VI+ + + GDM A + M RG P V TYT L+ GY +++ A +++E K+
Sbjct: 646 VIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKG 705
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
VTY+ LI + + D AL++LNEMK+ GV P+ Y L L K L R +
Sbjct: 706 ITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTYMMLEWLLKAKKLKTRRS 765
Query: 499 E 499
+
Sbjct: 766 K 766
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 158/347 (45%), Gaps = 35/347 (10%)
Query: 161 VDALLKAICSSVGKK--EVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFE 218
V ALL+ I K + + L+ I+ E + +V + + LI +F+ + A +
Sbjct: 143 VYALLRDIVCYYNKVNLDAFELFPILLE--SPKDAARSVIVFDLLIKVFAANSMLENAVD 200
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
VF + G + + F ++ L+ ++ S+ E+M TG P+ +++++C
Sbjct: 201 VFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYC 260
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
KG + + D + A ++L++ +
Sbjct: 261 KG------------------------------NFGEADIDTRQATEILEEMERNGESPTV 290
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
+S+ I LCR+ V A + +IS +N++I K G++ A+++L+
Sbjct: 291 VTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEE 350
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M+S G+ PDVYTY+ L+ G+ G +E+ ++ E K ++ S V+Y +L G CK
Sbjct: 351 MKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRL 410
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
D +L + ++ G + + Y+ LI+ C++ D +A KL+E+M
Sbjct: 411 SDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQG-DLDSAHKLMEEM 456
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 124/290 (42%), Gaps = 1/290 (0%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
TV + I ++G ++A + + N Y I L ++ D A V
Sbjct: 289 TVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVL 348
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
E+M G PD +I FCK G ++ + + M P + L LC++
Sbjct: 349 EEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKK 408
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ ++LD+ D KY +S +I+ C D+ A L+ +M+ P +
Sbjct: 409 RLS-DISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSN 467
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
F S++ + K G A+E +M G+ P + T ++ + G++EEA ++NE +
Sbjct: 468 FESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQ 527
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
+ TY+ +I CK + + AL+L M V P+V Y+ LI
Sbjct: 528 TQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLI 577
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 89/219 (40%), Gaps = 36/219 (16%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
+V + + LI F+K + A ++ + G + Y I L R A+++
Sbjct: 569 SVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLF 628
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+KM E G PD +I+ FC+ G ++A ++ ++ P
Sbjct: 629 KKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLP--------------- 673
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ ++S++ C+M + A L+ +M +G P
Sbjct: 674 ---------------------TVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVT 712
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
+N +I+A+ + G++ A+EML M+ G+ PD TY L
Sbjct: 713 YNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTYMML 751
>gi|302822703|ref|XP_002993008.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
gi|300139208|gb|EFJ05954.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
Length = 431
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 146/319 (45%), Gaps = 16/319 (5%)
Query: 174 KKEVYALWDIVKEIGEKEKGVLTVEILNELI------------ALFSKLGKGKA---AFE 218
K Y +++ + + VL ++ L+++I + LGK A +
Sbjct: 46 KPNAYTYKCVIQSLVKAGNVVLAMDFLDKMIKTGLEPDTLLYNVVLDGLGKANMIDEACK 105
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+F GC A+ TY I +L R K + A + ++M E G P + +I +C
Sbjct: 106 LFASMKSMGCPADDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYC 165
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
K G+ + A VV +K + P + LI+++ + T +LA ++ +
Sbjct: 166 KAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRT-ELACEIFERMKKSGVAVNT 224
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
F++++ + V A + +M + G P + FN++I+ +A + A ++L+
Sbjct: 225 VSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQE 284
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
MRS GL PDV+TYT ++ +A G M +A E+ + +K + VTY+ LI K
Sbjct: 285 MRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGR 344
Query: 459 FDCALKLLNEMKDVGVQPN 477
+ A + +MK G+ P+
Sbjct: 345 YQDARDIYFDMKKKGILPD 363
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 149/328 (45%), Gaps = 10/328 (3%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V + N +IA + + + + F + +G N TY I++L + A +
Sbjct: 14 VLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMDFLD 73
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS--VVAFLISSL-- 312
KMI+TG PD+ ++ K EA ++ A K M P A LI SL
Sbjct: 74 KMIKTGLEPDTLLYNVVLDGLGKANMIDEACKLF--ASMKSMGCPADDYTYAILIRSLGR 131
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
C+ DE L D +++ A +++VI C+ + A +L KM+ + P
Sbjct: 132 CKRDEEATLLFDEMEERGCTPSAPA---YTNVIDIYCKAGRIESAMVVLKKMLDKNLAPD 188
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+ NS+I+A S+ G A E+ + M+ G+ + ++ ++ G++ A + ++
Sbjct: 189 DYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMD 248
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
E + + + +T++TLI + + A K+L EM+ G+ P+V Y +I++ KA
Sbjct: 249 EMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFA-KA 307
Query: 493 LDWRTAEKLLEDMRLKGLHLNGITRALI 520
+ A ++ DM G N +T L+
Sbjct: 308 GNMGKAFEMFGDMEKAGCSANVVTYNLL 335
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 87/192 (45%), Gaps = 6/192 (3%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
+Y + ++VI + R +H ++ G P + VI + KAG++ AM+
Sbjct: 11 RYHVLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMD 70
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR--G 452
L M GL+PD Y ++ G ++EAC++ K TY LIR G
Sbjct: 71 FLDKMIKTGLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAILIRSLG 130
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
CK +E A L +EM++ G P+ Y +I C KA +A +L+ M K L
Sbjct: 131 RCKRDEE--ATLLFDEMEERGCTPSAPAYTNVIDIYC-KAGRIESAMVVLKKMLDKNLAP 187
Query: 513 NGIT-RALIRAV 523
+ T +LI AV
Sbjct: 188 DDYTLNSLITAV 199
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 143/331 (43%), Gaps = 11/331 (3%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I K + A +VF + + G N TY I+ L + + D A V +KM++
Sbjct: 229 NTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVD 288
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P + II CK A V+ ++ + P +I LC+
Sbjct: 289 KGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQ---- 344
Query: 321 LALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
A+D + + +KP ++ +I LC+ + V A+ + +MI +G P N +
Sbjct: 345 -AIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTY 403
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N +I Y G ++ +K M + L+PDV+TY L+ G+ EA + + +
Sbjct: 404 NCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIR 463
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ S Y ++ GY K LLN M G+ PN +N +I + +A+
Sbjct: 464 KGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDE 523
Query: 497 TAEKLLEDMRLKGLHLNGITRA-LIRAVKEL 526
++ M+ +GL N +T LI A+ +L
Sbjct: 524 VMHIFIK-MKQQGLSPNVVTYGTLIDALCKL 553
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 140/315 (44%), Gaps = 16/315 (5%)
Query: 213 GKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE---TGSLPDSEK 269
G+A + + + GC +Y ++ L R+ + A + M++ + PD
Sbjct: 136 GEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVS 195
Query: 270 VGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDF 329
+I+ F G+ +A Y+L E + P +I LC+ E +D +D
Sbjct: 196 YNIVINGFFNEGQVDKA---YSLFLEMGVSPDVVTYNTIIDGLCKAQE-----VDRAEDV 247
Query: 330 SGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSK 385
+ + +KP ++++I LC+ ++V A+ + KM+ +G P N +N++I K
Sbjct: 248 FQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCK 307
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
A + A + + M RG+KPD TY ++ G +++A + + + +T
Sbjct: 308 AQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLT 367
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
Y +I G CK + D A + +M D GV+PN YN LI L W + +++M
Sbjct: 368 YTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGY-LSTGQWEEVVQRIKEM 426
Query: 506 RLKGLHLNGITRALI 520
L + T L+
Sbjct: 427 SAHDLEPDVFTYGLL 441
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 134/325 (41%), Gaps = 40/325 (12%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
LL +C + E +L+D + G K +V I ++ + K G ++ N
Sbjct: 441 LLDYLCKNGKCNEARSLFDSMIRKGIKP----SVTIYGIMLHGYGKKGALSEMHDLLNLM 496
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
G N + I A ++R + D + KM + G P+ G +I CK G+
Sbjct: 497 VANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRV 556
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
+A + + + + P V F+S
Sbjct: 557 DDAVLQFNQMINEGVTPNNVV------------------------------------FNS 580
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
++ LC + + L +M+++G P FN+V+ K G + A ++ M G
Sbjct: 581 LVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMG 640
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
LKPDV +Y L+ G+ +M+EA ++L+ + + V+Y+TL+ GYCK D A
Sbjct: 641 LKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAY 700
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSL 488
L EM GV P V+ YN ++ L
Sbjct: 701 CLFREMLRKGVTPGVETYNTILNGL 725
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 135/301 (44%), Gaps = 25/301 (8%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
TY ++ L + + A S+ + MI G P G ++ + K G E H + L
Sbjct: 437 TYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLM 496
Query: 294 REKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKP----FSSVIR 346
+ P + +I + + DE + + + M ++ + P + ++I
Sbjct: 497 VANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKM--------KQQGLSPNVVTYGTLID 548
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
+LC++ V A ++MI+EG P N VFNS++ E+ M ++G++P
Sbjct: 549 ALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRP 608
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
D+ + ++ G++ EA +++ + ++Y+TLI G+C D A+KLL
Sbjct: 609 DIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLL 668
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH---------LNGITR 517
+ M G++PN+ YN L+ C KA A L +M KG+ LNG+ R
Sbjct: 669 DGMVSAGLKPNIVSYNTLLHGYC-KAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFR 727
Query: 518 A 518
+
Sbjct: 728 S 728
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 70/161 (43%), Gaps = 11/161 (6%)
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA----GDMTPAMEMLKLMR--SRGLKPD 407
+H A L +++ P N ++S S+A +++R S + PD
Sbjct: 24 LHDALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNKVAPD 83
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK-LL 466
TY+ ++ + G++E K R+ + + L++G C + A+ LL
Sbjct: 84 CCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLL 143
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRL 507
+M +VG + V YN L++ LC D R AE+ E + +
Sbjct: 144 RQMPEVGCRLGVVSYNTLLKGLC----DRRRAEEARELLHM 180
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 86/208 (41%), Gaps = 9/208 (4%)
Query: 248 FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF 307
D A + + M+ G P+ ++ +CK G+ A+ ++ K + P
Sbjct: 661 MDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNT 720
Query: 308 LISSLCQE---DETVKLALDMLDDFSGEARK-YAIKPFSSVIRSLCRMKDVHGAKTLLSK 363
+++ L + E +L ++M+ ++RK ++I +S ++ C+ A +
Sbjct: 721 ILNGLFRSGRFSEARELYVNMI-----KSRKLWSICTYSIILDGFCKNNCFDEAFKIFQS 775
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
+ S FN +I K G AM++ + + GL P V TY + G
Sbjct: 776 LCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGS 835
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIR 451
+EE + + +K+ + + + LIR
Sbjct: 836 LEELDCLFSVMEKSGTAPNSHMLNALIR 863
>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
Length = 631
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 142/323 (43%), Gaps = 9/323 (2%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKG--VLTVEILNELIALFSKLGKGKAAFEVFN 221
LL A+C S +E L+ E E+G VL V + L+ F K G+ A EVF
Sbjct: 306 LLIALCKSKQLEEALTLFQ------EAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFY 359
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
GC+ + Y I L ++ D A + E M G +PD +I G
Sbjct: 360 NMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCG 419
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ ++A+ + + + +K P L++ L + T + A D+ D+ + F
Sbjct: 420 RYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDE-ACDLFDEMQANKCMPDLTTF 478
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
++I +L + + A ++++ G P + ++N++IS + ++G + E+ + M
Sbjct: 479 GTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIE 538
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
PD TYT L+ G++ G A E+L E + + TY+ LIR + +
Sbjct: 539 CSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVED 598
Query: 462 ALKLLNEMKDVGVQPNVDEYNKL 484
A L EM G P++ Y+ L
Sbjct: 599 AYTLFKEMIAKGFNPDMQTYSAL 621
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 131/305 (42%), Gaps = 24/305 (7%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSL--PDSEKVGKIISWFCKGGKAKEAHVVYTLAREK 296
I+A R D A + + M G+ PD+ + W C+ + ++A ++ RE
Sbjct: 60 IQAFGRAGDLDAAMGMLDDM-RRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRET 118
Query: 297 KMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCR 350
P VVA+ LI+ C+ + + ALDM E + KP F +++ LC+
Sbjct: 119 CDCAP-DVVAYNTLIAGYCKAGDGDR-ALDMFRRLKQEG---SCKPNAVSFDTLVIFLCK 173
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
M A + +M+ G V N++I + G + A +L M + D +T
Sbjct: 174 MSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFT 233
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
Y L++ + GQM E + A+ + LS V Y+ +I+G+ + A +L
Sbjct: 234 YGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTM 293
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI--------RA 522
P+V YN LI +LC K+ A L ++ G+ L+ T + + RA
Sbjct: 294 TKESVPDVFTYNLLI-ALC-KSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRA 351
Query: 523 VKELE 527
K LE
Sbjct: 352 AKALE 356
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 141/334 (42%), Gaps = 20/334 (5%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
A + +C ++ L+D ++E + V+ N LIA + K G G A ++F +
Sbjct: 94 AAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAY---NTLIAGYCKAGDGDRALDMFRR 150
Query: 223 FGDYG-CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G C N ++ + L + A +V ++M+ G D +I C+ G
Sbjct: 151 LKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLG 210
Query: 282 KAKEAH------VVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDM-LDDFSGEAR 334
++A + AR+ Y L+++ C+ + ++A M L G A
Sbjct: 211 MLRQARRLLHHMTAHACARDAFTY------GILVNAHCRAGQMHEVASFMELARHDGCA- 263
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
+ ++ +I+ R + A L +++ P +N +I A K+ + A+
Sbjct: 264 -LSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLI-ALCKSKQLEEALT 321
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+ + G+ DV+TY+ LM + G+ +A E+ +K V Y+ LI
Sbjct: 322 LFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLG 381
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
K + D AL+LL +M G+ P+ YN +I L
Sbjct: 382 KQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVL 415
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 119/323 (36%), Gaps = 35/323 (10%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
+ L+ K+ + A VF + G A+ I R + A + M
Sbjct: 164 FDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMT 223
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE------------------------ 295
D+ G +++ C+ G+ E LAR
Sbjct: 224 AHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLA 283
Query: 296 ----------KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVI 345
K P L+ +LC+ + ++ AL + + + +S ++
Sbjct: 284 EATQLFESTMTKESVPDVFTYNLLIALCKSKQ-LEEALTLFQEAEQGGVVLDVFTYSYLM 342
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
+ + A + M G P V+N +IS K G + A+E+L+ M +G+
Sbjct: 343 DAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIM 402
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
PD TY ++ ++ G+ E+A K+ VTY+TL+ G KL D A L
Sbjct: 403 PDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDL 462
Query: 466 LNEMKDVGVQPNVDEYNKLIQSL 488
+EM+ P++ + LI +L
Sbjct: 463 FDEMQANKCMPDLTTFGTLIDTL 485
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 77/153 (50%), Gaps = 7/153 (4%)
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+++++ +C++ LL+++ +G I A+ +AGD+ AM ML MR
Sbjct: 22 TAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFGRAGDLDAAMGMLDDMR- 80
Query: 402 RG--LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLE 457
RG +PD +T M ++E+A + ++ ++ +P V Y+TLI GYCK
Sbjct: 81 RGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRET-CDCAPDVVAYNTLIAGYCKAG 139
Query: 458 EFDCALKLLNEMKDVG-VQPNVDEYNKLIQSLC 489
+ D AL + +K G +PN ++ L+ LC
Sbjct: 140 DGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLC 172
>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 142/328 (43%), Gaps = 38/328 (11%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V N LI K GK + A ++ G + N +Y I+A + K +D A +
Sbjct: 345 VATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLL 404
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M E G PD G +I G D
Sbjct: 405 QMAERGCKPDIVTYGILIHGLVVSG--------------------------------HMD 432
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ V + + ++D G + AI ++ ++ LC+ AK L S+M+ P V+
Sbjct: 433 DAVNMKVKLID--RGVSPDAAI--YNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVY 488
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
++I + ++GD A ++ L +G+K DV + ++ G+ G ++EA +N +
Sbjct: 489 ATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNE 548
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
H TY T+I GY K ++ A+K+ M+ +PNV Y LI C + D++
Sbjct: 549 EHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQG-DFK 607
Query: 497 TAEKLLEDMRLKGLHLNGIT-RALIRAV 523
AE+ ++M+L+ L N +T LIR++
Sbjct: 608 MAEETFKEMQLRDLVPNVVTYTTLIRSL 635
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 132/297 (44%), Gaps = 14/297 (4%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + K + A ++ + + GC + TY I L D A ++ K+I+ G
Sbjct: 386 LIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRG 445
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETV 319
PD+ ++S CK G+ A ++++ ++ + P V A LI + DE
Sbjct: 446 VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEAR 505
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
K+ ++ + K + +++I+ CR + A +++M E P ++++
Sbjct: 506 KVFSLSVE----KGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTI 561
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I Y K DM A+++ + M KP+V TYT L++G+ G + A E E +
Sbjct: 562 IDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDL 621
Query: 440 RLSPVTYHTLIRGYCK----LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
+ VTY TLIR K LE+ +L+ K V PN +N L+Q K
Sbjct: 622 VPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCV---PNEVTFNCLLQGFVKKT 675
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 132/323 (40%), Gaps = 56/323 (17%)
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRR--------------KIFDWAWSVCEKMIE 260
A + +FN+ D E T EALS +I+D+ + +
Sbjct: 110 ARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYD---- 165
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
S+PD ++S K + +A VY ++ L+ +C E + V+
Sbjct: 166 --SVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGK-VE 222
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
+ +++ G+ I ++++I C++ D+ A + ++ +G P F ++I
Sbjct: 223 VGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMI 282
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGL-----------------------------------K 405
+ + K GD + +L ++ RGL K
Sbjct: 283 NGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCK 342
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
PDV TY L++ G+ E A L+EA K + ++Y LI+ YCK +E+D A KL
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 466 LNEMKDVGVQPNVDEYNKLIQSL 488
L +M + G +P++ Y LI L
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGL 425
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 51/267 (19%), Positives = 96/267 (35%), Gaps = 16/267 (5%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F + G A +VF+ + G + + I+ R + D A + +M E
Sbjct: 491 LIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEH 550
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+PD II + K A ++ + K P LI+ C + + K+A
Sbjct: 551 LVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGD-FKMA 609
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCR-MKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
+ + + ++++IRSL + + A M++ P FN ++
Sbjct: 610 EETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQ 669
Query: 382 AY--------------SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
+ S G + E M+S G Y + G ++ A
Sbjct: 670 GFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTA 729
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYC 454
C ++ K PV++ ++ G+C
Sbjct: 730 CMFQDKMVKKGFSPDPVSFAAILHGFC 756
>gi|255660822|gb|ACU25580.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 418
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 165/398 (41%), Gaps = 57/398 (14%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
L++ + S GK A++ + E ++ + + + LI + + G + A E +
Sbjct: 34 TLIQIVVSRKGKGSASAVFAAILETKGTQRS--DIYVFSGLITAYLESGFLRDAIECYRL 91
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
++ +T IE L + K F W E+ +E G ++ FCKGG+
Sbjct: 92 TKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHNFCKGGE 151
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAF----------------------------------- 307
A V+ + + P SVV+F
Sbjct: 152 IXLAQSVFDSITKWGLRP--SVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTY 209
Query: 308 --LISSLCQE---DETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAK 358
LI+ LC+E D+ L +MLD+ + P F+++I C+ V A
Sbjct: 210 SVLINGLCKESKMDDANALFDEMLDN--------GLVPNGVTFTTLIDGHCKNGRVDLAM 261
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+ +M+S+ P +N++I K GD+ A +++ M +GLKPD TYT L+ G
Sbjct: 262 EIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGN 321
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G +E A E K + RL V Y LI C+ A K+L EM VG++P +
Sbjct: 322 CKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLREMLSVGLKPEI 381
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
Y +I C K W T KLL++M+ G N +T
Sbjct: 382 GTYTMIINEFCKKGDVW-TGSKLLKEMQRDGYLPNVVT 418
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 68/156 (43%), Gaps = 19/156 (12%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS-EGPPPGNAVFNSVISAYSKAGDMTPAM 393
++ ++ + ++I LC + + AKTL+ ++S +G +AVF +++
Sbjct: 10 RHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQ------- 62
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
+ D+Y ++GL++ Y G + +A E K++ R+ T +I
Sbjct: 63 -----------RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHL 111
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
KL+ F E + G ++ +N L+ + C
Sbjct: 112 MKLKYFKLVWGFYEESLECGYPASLYFFNILMHNFC 147
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 130/288 (45%), Gaps = 1/288 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+ K GK A ++F+ G + TY + + + + M++
Sbjct: 116 NSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQ 175
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G D +I + K K E +V++ R++ + P +I LC+
Sbjct: 176 NGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDD 235
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
L+ + + + ++S+I +LC A+ L+ +++ +G P FN+++
Sbjct: 236 AMLN-FEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTIL 294
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ K G + + ++ L+ G+ PDV TY+ L+ GY G+M+ A ++L +
Sbjct: 295 DSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLK 354
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
VTY TLI GYCK+ + AL L EM+ GV P++ YN ++ L
Sbjct: 355 PDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGL 402
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 122/265 (46%), Gaps = 7/265 (2%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G + + I A ++++ D V KM + G P++ +I CK G+ +A
Sbjct: 177 GMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDA 236
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK---LALDMLDDFSGEARKYAIKPFSS 343
+ + +K + P V LI +LC D+ K L ++LD + I F++
Sbjct: 237 MLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILD----QGINPNIVFFNT 292
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
++ SLC+ V +K L + G P ++++I Y AG M AM++L M S G
Sbjct: 293 ILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVG 352
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
LKPD TY+ L++GY +ME+A + E + N +TY+ ++ G + A
Sbjct: 353 LKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAK 412
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSL 488
+L + + G Q + YN ++
Sbjct: 413 ELYARITESGTQLELSTYNIILMDF 437
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 159/366 (43%), Gaps = 30/366 (8%)
Query: 194 VLTVEIL------NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKI 247
VLTV ++ N ++ + G+ + A +F K G + TY ++ L +
Sbjct: 68 VLTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGK 127
Query: 248 FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF 307
A + + M++ G PD G ++ + G E H + L + M V
Sbjct: 128 CTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNI 187
Query: 308 LISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSK 363
LI + ++++ ++ L + R+ + P + +VI LC++ + A +
Sbjct: 188 LICAYTKQEKVDEVVL-----VFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQ 242
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
MI +G P V+ S+I A A E++ + +G+ P++ + ++ G+
Sbjct: 243 MIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGR 302
Query: 424 MEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEY 481
+ E+ ++ + H ++P +TY TLI GYC + D A+KLL M VG++P+ Y
Sbjct: 303 VIESKKLFDLL--GHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTY 360
Query: 482 NKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI----------RAVKELEEDAI 531
+ LI C K A L ++M G++ + IT +I A KEL
Sbjct: 361 STLINGYC-KINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARIT 419
Query: 532 ENGEAL 537
E+G L
Sbjct: 420 ESGTQL 425
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 120/288 (41%), Gaps = 49/288 (17%)
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALD 324
PD II K G +A++ Y ++++ P +I++L +
Sbjct: 9 PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAM------ 62
Query: 325 MLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
D + E + P ++S++ C A + KM S+G P +NS++
Sbjct: 63 ---DRAMEVLTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLM 119
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL-----NEAK 435
K G T A ++ M RGLKPD+ TY L+ GYA+ G + E ++L N +
Sbjct: 120 DYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQ 179
Query: 436 KNH----------------------------SRLSP--VTYHTLIRGYCKLEEFDCALKL 465
+H L+P V Y T+I G CKL D A+
Sbjct: 180 LDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLN 239
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
+M D G+ PNV Y LI +LC W AE+L+ ++ +G++ N
Sbjct: 240 FEQMIDKGLTPNVVVYTSLIHALCTYD-KWEKAEELIFEILDQGINPN 286
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 116/270 (42%), Gaps = 9/270 (3%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
+ N LI ++K K VF+K G N Y I+ L + D A E+
Sbjct: 183 HVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQ 242
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
MI+ G P+ +I C K ++A + ++ + P ++ SLC+E
Sbjct: 243 MIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGR 302
Query: 318 TV--KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ K D+L + +S++I C + GA LL+ M+S G P +
Sbjct: 303 VIESKKLFDLLGHIGVNPD---VITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVT 359
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
++++I+ Y K M A+ + K M S G+ PD+ TY ++ G + A E+
Sbjct: 360 YSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARIT 419
Query: 436 KNHSRLSPVTYHTLIRGYCK----LEEFDC 461
++ ++L TY+ ++ + K + F C
Sbjct: 420 ESGTQLELSTYNIILMDFAKTNSLMMHFGC 449
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 5/141 (3%)
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
PP +N++I K GD+ A M R + PD TY +++ + M+ A E
Sbjct: 8 PPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAME 67
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+L + TY++++ GYC + + A+ + +M G++P+V YN L+ LC
Sbjct: 68 VLTVMVMPNC----FTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLC 123
Query: 490 LKALDWRTAEKLLEDMRLKGL 510
K A K+ + M +GL
Sbjct: 124 -KNGKCTEARKIFDSMVKRGL 143
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 140/295 (47%), Gaps = 2/295 (0%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ K A E+FN+ + N T+ ++ L ++ + A V E M E G P+
Sbjct: 170 GRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTY 229
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
+++ +C + +A V+ + K P + LI+ C+ + A +L S
Sbjct: 230 NALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKS-RRIDEAKALLTQMS 288
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
+ ++++++ LC + A+ L KM S G P ++ ++ K G +
Sbjct: 289 EKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLE 348
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A+++L M+ R L+PD+ Y L+ G G++E A E+ ++ N R S TY+ +I
Sbjct: 349 EALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMI 408
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
+G K D A KL +M+D G P+ YN +IQ L+ D TA +L+++M
Sbjct: 409 KGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGF-LQNQDPSTAIQLIDEM 462
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 144/324 (44%), Gaps = 16/324 (4%)
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
N+ +G N T I +L R +A SV KM + G PDS +I+ C
Sbjct: 110 NQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNE 169
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
G+ KEA ++ + P L+ LC++ V A + + + + + I
Sbjct: 170 GRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKG-MVSEARCVFETMTEKGVEPNIYT 228
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+++++ C +++ A + M+ +G P ++ +I+ Y K+ + A +L M
Sbjct: 229 YNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMS 288
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+ L P+ TY LM G + + EA E+ + + + TY L+ G CK +
Sbjct: 289 EKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLE 348
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE--------------DMR 506
ALKLL M++ ++P++ YN LIQ + + A A++L ++
Sbjct: 349 EALKLLTSMQERKLEPDIVLYNILIQGMFI-AGKLEVAKELFSKLFANGIRPSVRTYNIM 407
Query: 507 LKGLHLNGITRALIRAVKELEEDA 530
+KGL G++ + +++E+D
Sbjct: 408 IKGLLKEGLSDEAYKLFRKMEDDG 431
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 144/308 (46%), Gaps = 20/308 (6%)
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY- 299
+++++K + S+C +M G + + +I+ C+ +H+ + ++ KM+
Sbjct: 95 SIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCR-----LSHIHFAVSVLSKMFK 149
Query: 300 ----PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVH 355
P LI+ LC E +K A+++ ++ +G F+ ++ LC+ V
Sbjct: 150 LGIQPDSVTFTTLINGLCNEGR-IKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVS 208
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
A+ + M +G P +N++++ Y +M A ++ ++M +G P V++Y+ L+
Sbjct: 209 EARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILI 268
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
+GY +++EA +L + + + VTY+TL++G C A +L +M G+
Sbjct: 269 NGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGML 328
Query: 476 PNVDEYNKLIQSLC--------LKALDWRTAEKLLEDMRLKGLHLNGITRA-LIRAVKEL 526
PN+ Y+ L+ LC LK L KL D+ L + + G+ A + KEL
Sbjct: 329 PNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKEL 388
Query: 527 EEDAIENG 534
NG
Sbjct: 389 FSKLFANG 396
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 61/151 (40%), Gaps = 1/151 (0%)
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG 422
+MI P P + + +K + + + M G+ + YT L++
Sbjct: 76 RMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLS 135
Query: 423 QMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
+ A +L++ K + VT+ TLI G C A++L NEM PN +
Sbjct: 136 HIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFT 195
Query: 483 KLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
L+ LC K + A + E M KG+ N
Sbjct: 196 ILVDVLCKKGM-VSEARCVFETMTEKGVEPN 225
>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Vitis vinifera]
gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
Length = 878
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 142/325 (43%), Gaps = 14/325 (4%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
LN LIA G+ + A EVF+K G GC N+ ++ + R + A + + M
Sbjct: 154 LNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMG 213
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED--- 316
G P+ +IS FC+ G+ +EA + RE ++P IS+LC
Sbjct: 214 SFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKIL 273
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
E ++ DM D + I F+ ++ C+ + AKTL+ M G +
Sbjct: 274 EASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESY 333
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N + + G + A LK M +G++P++Y++ +M G G + +A I+
Sbjct: 334 NIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMIS 393
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ VTY TL+ G C + A +L+EM G PN N L+ SL W+
Sbjct: 394 SGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSL------WK 447
Query: 497 -----TAEKLLEDMRLKGLHLNGIT 516
AEKLL+ M + L+ +T
Sbjct: 448 EGRIFEAEKLLQKMNERSYDLDNVT 472
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 130/296 (43%), Gaps = 20/296 (6%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRR-KIFDWAWSVCEKMIETGSLPDSEK 269
GK A + ++ GC N T + +L + +IF+ A + +KM E D+
Sbjct: 414 GKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFE-AEKLLQKMNERSYDLDNVT 472
Query: 270 VGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDF 329
+I CK GK EA + E + + L +S L D
Sbjct: 473 CNIVIDGLCKSGKLDEAVEIV----EGMWIHGSAALGNLGNSFIG-----------LVDS 517
Query: 330 SGEARKYA--IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG 387
S +K + +S +I LC+ + A+ +M+ + P + ++++ I ++ K G
Sbjct: 518 SSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHG 577
Query: 388 DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYH 447
++ A +LK M RG + TY L+ G + Q+ E +L++ K+ + TY+
Sbjct: 578 KISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYN 637
Query: 448 TLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
+I C+ A LL+EM G+ PN+ + LI++ C KA D+ +++ E
Sbjct: 638 NMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFC-KASDFGVVKEVFE 692
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 125/308 (40%), Gaps = 44/308 (14%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
L+ + + G A E+ + G +G N+ Y I + R + A + E+M E G
Sbjct: 192 LVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDG 251
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR--EKKMYPPQSVVAF--LISSLCQED-- 316
PD IS C GK EA ++ + E+ P ++ F ++ C+E
Sbjct: 252 LFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGML 311
Query: 317 -------ETVK----------------------------LALDMLDDFSGEARKYAIKPF 341
E++K LAL + D E Y+ F
Sbjct: 312 EEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYS---F 368
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
++V+ LC+ + A+ ++ MIS G P +++++ G + A +L M
Sbjct: 369 NTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMR 428
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
RG P+ YT L+ G++ EA ++L + + L VT + +I G CK + D
Sbjct: 429 RGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDE 488
Query: 462 ALKLLNEM 469
A++++ M
Sbjct: 489 AVEIVEGM 496
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 84/167 (50%), Gaps = 6/167 (3%)
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
PP ++N V+ + + + + K M G+ P+ YT L++G + G+ E+A E
Sbjct: 113 PPPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDARE 172
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ ++ R + ++ L+RGYC+ AL+LL+ M GVQPN YN LI S C
Sbjct: 173 VFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFC 232
Query: 490 LKALDWRTAEKLLEDMRLKGLHLNGIT-----RALIRAVKELEEDAI 531
+ + AE+L+E MR GL + +T AL A K LE I
Sbjct: 233 REGRN-EEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRI 278
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 127/294 (43%), Gaps = 8/294 (2%)
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH 287
C+ + TY I L + D A +M+ PDS I FCK GK A
Sbjct: 524 CLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAF 583
Query: 288 VVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRS 347
V ++ LI L +++ ++ +LDD + I ++++I
Sbjct: 584 RVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEI-YGLLDDMKEKGITPNICTYNNMISC 642
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR-GLKP 406
LC + A +LL +M+ +G P + F +I A+ KA D E+ ++ S G K
Sbjct: 643 LCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIALSICGHKE 702
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
+Y+ + + GG++ EA E+ + A L Y+ LI CK E + A +L
Sbjct: 703 ALYSL--MFNELLIGGEVSEAKELFDAALDRCFDLGNFQYNDLIEKLCKDEMLENASDIL 760
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE---DMRLKGLHLNGITR 517
++M D G + + + +I L + A++L E DM +G+ N ITR
Sbjct: 761 HKMIDKGYRFDPASFMPVIDGLGKRG-KKHDADELAERMMDMASEGMVENKITR 813
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 4/203 (1%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++ V+ S R V L M+ G P N +I+ +G A E+ M
Sbjct: 119 YNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMG 178
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+G +P+ +++ L+ GY G A E+L+ + + V Y+TLI +C+ +
Sbjct: 179 VKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNE 238
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLK---GLHLNGITR 517
A +L+ M++ G+ P+V +N I +LC A A ++ DM++ GL IT
Sbjct: 239 EAERLVERMREDGLFPDVVTFNSRISALC-SAGKILEASRIFRDMQIDEELGLPRPNITT 297
Query: 518 ALIRAVKELEEDAIENGEALVEA 540
+ +E +E + LVE+
Sbjct: 298 FNLMLEGFCKEGMLEEAKTLVES 320
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 102/235 (43%), Gaps = 8/235 (3%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEAL-SRRKIFDWAWSVCEK 257
I + I F K GK +AF V GC + +TY I L S+ +IF+ + + +
Sbjct: 565 IYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFE-IYGLLDD 623
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M E G P+ +IS C+GG+ K+A + +K + P S LI + C+ +
Sbjct: 624 MKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASD 683
Query: 318 --TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
VK ++ G K A+ +S + L +V AK L + GN
Sbjct: 684 FGVVKEVFEIALSICGH--KEAL--YSLMFNELLIGGEVSEAKELFDAALDRCFDLGNFQ 739
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
+N +I K + A ++L M +G + D ++ ++ G G+ +A E+
Sbjct: 740 YNDLIEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADEL 794
>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 653
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 178/400 (44%), Gaps = 27/400 (6%)
Query: 106 NVLSLLQSSVDGYLESSLDSF----ELDLHEDFVLKVLETPLVL--GENLVCFFKWVTSG 159
+L+LL S + +E +LDSF + L +FV VL++ + E V FF W +G
Sbjct: 86 QILNLLDGSSN--MEHNLDSFCRKFFVKLSPNFVTFVLQSVELREKPEVAVRFFFW--AG 141
Query: 160 VVDALLKAICSSVGKKEVYAL-WDIVK----EIGEKEKGVLTVE-ILNELIALFSKLGKG 213
+ I V E+ D+VK K++G+L E N LI F LG
Sbjct: 142 KQKKYVHKIECHVSLIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLV 201
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
+ V+ + + G + TY F + L + A V E M +PD+ +
Sbjct: 202 EELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIM 261
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFS 330
I +CK GK ++A + K + P + LI + E D + L L+M
Sbjct: 262 IKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEM----- 316
Query: 331 GEARKYAIKP--FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD 388
E R I P +S VI LC+ + A + M +G A++ ++I +YSK G
Sbjct: 317 -EERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGS 375
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHT 448
M AM + + M++ G +PD TY+ L++G G++++ E+ + + ++ + Y +
Sbjct: 376 MEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYAS 435
Query: 449 LIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
LI G K + A L EM + G + YN +I +L
Sbjct: 436 LIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDAL 475
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 137/327 (41%), Gaps = 2/327 (0%)
Query: 184 VKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALS 243
V E+ + K V N +I + K GK + A E F ++ TY I+A
Sbjct: 242 VFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACY 301
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS 303
+ FD S+ +M E G +I CK K EA+ V+ +K +
Sbjct: 302 SERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVA 361
Query: 304 VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSK 363
+ LI S ++ +++ A+ + + E + +S ++ LC+ + L
Sbjct: 362 IYTALIDSY-SKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDF 420
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
++G + S+I KAG + A + + M +G D Y Y ++ A G+
Sbjct: 421 CRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGK 480
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
+++A + ++ + T+ LI G K + + A+K ++M D G+ P V +
Sbjct: 481 IDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRA 540
Query: 484 LIQSLCLKALDWRTAEKLLEDMRLKGL 510
L LCL R A K+L+D+ G+
Sbjct: 541 LAIGLCLCGKVAR-ACKILDDLAPMGI 566
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 133/324 (41%), Gaps = 39/324 (12%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I K K A+ VF GC AN Y I++ S+ + A + E+M G
Sbjct: 331 VIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEG 390
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD+ +++ CK G+ + ++ R K + ++ A
Sbjct: 391 FEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGV----AINAMF-------------- 432
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++S+I L + + A+ L +M +G + +N++I A
Sbjct: 433 ------------------YASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDA 474
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+K G + A+ + M G VYT+T L+ G + EEA + ++ +
Sbjct: 475 LAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPT 534
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
++ L G C + A K+L+++ +G+ P + +I +LC KA + A KL
Sbjct: 535 VASFRALAIGLCLCGKVARACKILDDLAPMGIIPET-AFEDMINTLC-KAQRIKEACKLA 592
Query: 503 EDMRLKGLHLNGITRA-LIRAVKE 525
+ + +G + G R LI A+++
Sbjct: 593 DGIVDRGREIPGRIRTVLINALRK 616
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 83/180 (46%), Gaps = 2/180 (1%)
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+S+I+S + V + +M G P +N +++ + + A ++ ++M
Sbjct: 189 NSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDG 248
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
+ PD TY ++ GY G++++A E + + + + +TY TLI+ +FD
Sbjct: 249 GKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDT 308
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN-GITRALI 520
L L EM++ G++ Y+ +I LC K A + E M KG N I ALI
Sbjct: 309 CLSLYLEMEERGLEIPPHSYSLVIGGLC-KQRKCMEAYAVFETMNQKGCRANVAIYTALI 367
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 100/243 (41%), Gaps = 15/243 (6%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
L+ +C S + L+D + G + +++ L K G+ + A +F +
Sbjct: 400 VLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGL----GKAGRIEDAENLFEE 455
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ GC + Y I+AL++ D A ++ +M E G +I K K
Sbjct: 456 MSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHK 515
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP-- 340
+EA + +K + P + L LC + + A +LDD + I P
Sbjct: 516 NEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVAR-ACKILDDLA----PMGIIPET 570
Query: 341 -FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
F +I +LC+ + + A L ++ G + +I+A KAG+ + ++KLM
Sbjct: 571 AFEDMINTLCKAQRIKEACKLADGIVDRGREIPGRIRTVLINALRKAGN---SDLVIKLM 627
Query: 400 RSR 402
S+
Sbjct: 628 HSK 630
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 2/146 (1%)
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
S+I + + D+ + ++ RGL L+ + N G +EE + K+N
Sbjct: 155 SLIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKEN 214
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
S TY+ L+ G + A K+ M + P+ YN +I+ C KA +
Sbjct: 215 GIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYC-KAGKLQK 273
Query: 498 AEKLLEDMRLKGLHLNGIT-RALIRA 522
A + DM +K + + IT LI+A
Sbjct: 274 AMEKFRDMEMKNVKPDKITYMTLIQA 299
>gi|449465535|ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Cucumis sativus]
Length = 542
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 191/440 (43%), Gaps = 28/440 (6%)
Query: 65 PETDFSSRSFGENEYAQMDPSADAVESKEEEAYEIDGDKLENVLSLLQSSVDGYLESSLD 124
P +++S + A + E+ EI D E L+ + + +ES LD
Sbjct: 56 PNRNYTSHRSTHHRIEHSKQDLKASQKSIVESDEIAQDA-EKFCKLISKNPNSCIESLLD 114
Query: 125 SFELDLHEDFVLKVLETPLVLGENLVCFFKWV--------TSGVVDALLKAICSSVGK-K 175
++L +++VL+ G + FF+W T+ + L++A+ GK K
Sbjct: 115 GAPMELSPALIVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEAL----GKIK 170
Query: 176 EVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETY 235
+ +W++V ++ K KG+L+ E + +++ K K A E F K +G +
Sbjct: 171 QFNVIWNLVSDM--KRKGILSRETFALITRRYARARKVKEAVESFEKMEKFGFQMGVSDF 228
Query: 236 YFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE 295
++ L + + A V +KM PD + ++ + + + + VY R+
Sbjct: 229 NRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRD 288
Query: 296 KKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKP--FSSVIRSLCR 350
+ P LI++ C+ DE ++L +M EA+ P F ++I L
Sbjct: 289 EGFEPDVVTFGILINAHCKARKYDEAIRLFHEM------EAKNIKPSPHVFCTLINGLGS 342
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
K + A ++ G P +N+V+ AY + M A M+ MR G+ P+ T
Sbjct: 343 EKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRT 402
Query: 411 YTGLMSGYANGGQMEEACEILNE-AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
Y ++ G + +EA + +++ + TY +IR +C E D A+++ +EM
Sbjct: 403 YDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEM 462
Query: 470 KDVGVQPNVDEYNKLIQSLC 489
K GV P + ++ LI SLC
Sbjct: 463 KAKGVLPGMHLFSTLINSLC 482
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 112/241 (46%), Gaps = 2/241 (0%)
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAF-LISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
GK K+ +V++ L + K S F LI+ VK A++ + + +
Sbjct: 167 GKIKQFNVIWNLVSDMKRKGILSRETFALITRRYARARKVKEAVESFEKMEKFGFQMGVS 226
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
F+ ++ +LC+ ++V A+ + KM P + ++ + + ++ E+ + M
Sbjct: 227 DFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREM 286
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
R G +PDV T+ L++ + + +EA + +E + + + SP + TLI G +
Sbjct: 287 RDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRL 346
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRAL 519
AL+ ++K G P YN ++ + C ++ A +++++MR G+ N T +
Sbjct: 347 KEALEFFEQLKLSGFAPEAPTYNAVVGAYCW-SMKMAYAYRMVDEMRKSGVGPNSRTYDI 405
Query: 520 I 520
I
Sbjct: 406 I 406
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 87/224 (38%), Gaps = 37/224 (16%)
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
K A E F + G TY + A +A+ + ++M ++G P+S I
Sbjct: 347 KEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDII 406
Query: 274 ISWFCKGGKAKEAHVVYT-LAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
+ KG K+KEA+ V+ ++RE P S +I C E E V +A+ + D+
Sbjct: 407 LHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNE-ERVDMAIQIWDE---- 461
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
M ++G PG +F+++I++ + A
Sbjct: 462 -------------------------------MKAKGVLPGMHLFSTLINSLCHEHKLEDA 490
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
+ M G++P ++ L + G+ + A + + KK
Sbjct: 491 CTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTALLMAEKIKK 534
>gi|357142282|ref|XP_003572519.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 706
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 160/352 (45%), Gaps = 15/352 (4%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
L+ + C S + D + + G + + NE+I+ F++LG+ K A +F+
Sbjct: 231 LIHSFCQSGLVDRAMGILDRMSKCGCTPGAI----VYNEIISCFAELGRVKEALHLFSCM 286
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
C + +Y ++ L R + ++ A + +M+ PD +IS+ C G
Sbjct: 287 P---CKPDIFSYNAVLKGLCRAERWEDAGELITEMVRKDCSPDEVTFNTVISFLCHKGLV 343
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
A V + P + LI++ E V+ AL++L K S
Sbjct: 344 DCALEVVDQMPKYGRKPDNFTYSALINAF-SEQGCVEDALELLRSMPCSPNTVCYK---S 399
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
V++ LCR L+ +M+ P VF +I + G + +E+L+ + + G
Sbjct: 400 VLKGLCRDGQWEDVGQLIGEMVRNDCAPDEMVFGLIIDCLCQRGLVDCGLEVLQEVPNYG 459
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
PDV YT L++G+A G+++++ ++ K + + VTY+ ++ G CK+E ++ A
Sbjct: 460 CSPDVVMYTSLLNGFAEYGRVDDSLKLF---KSMTCKPNTVTYNYVLMGLCKVELWEDAG 516
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
KL++EM PN ++ LI SLC K L A + E M++ G N I
Sbjct: 517 KLIDEMVGQECPPNEMTFSILISSLCQKGL-VECAIDVFEKMQMYGCTPNVI 567
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 138/302 (45%), Gaps = 12/302 (3%)
Query: 193 GVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAW 252
G V N LIA + + G+ + A + N Y ++ L K + A
Sbjct: 154 GAADVVTYNTLIAGYCRGGRLEDARLLVASMPP---APNSYAYNTLLKGLCSAKQWGDAE 210
Query: 253 SVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM-YPPQSVVAFLISS 311
+ E+M S PD G +I FC+ G A + L R K P ++V I S
Sbjct: 211 ELVEEMTRNDSPPDDLTFGMLIHSFCQSGLVDRAMGI--LDRMSKCGCTPGAIVYNEIIS 268
Query: 312 LCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
E VK AL + FS K I +++V++ LCR + A L+++M+ + P
Sbjct: 269 CFAELGRVKEALHL---FSCMPCKPDIFSYNAVLKGLCRAERWEDAGELITEMVRKDCSP 325
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
FN+VIS G + A+E++ M G KPD +TY+ L++ ++ G +E+A E+L
Sbjct: 326 DEVTFNTVISFLCHKGLVDCALEVVDQMPKYGRKPDNFTYSALINAFSEQGCVEDALELL 385
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
+ + V Y ++++G C+ +++ +L+ EM P+ + +I LC +
Sbjct: 386 RSMPCSPNT---VCYKSVLKGLCRDGQWEDVGQLIGEMVRNDCAPDEMVFGLIIDCLCQR 442
Query: 492 AL 493
L
Sbjct: 443 GL 444
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 133/321 (41%), Gaps = 37/321 (11%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N +I+ G A EV ++ YG + TY I A S + + A + M
Sbjct: 330 FNTVISFLCHKGLVDCALEVVDQMPKYGRKPDNFTYSALINAFSEQGCVEDALELLRSMP 389
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---- 315
+ P++ ++ C+ G+ ++ + P + V +I LCQ
Sbjct: 390 CS---PNTVCYKSVLKGLCRDGQWEDVGQLIGEMVRNDCAPDEMVFGLIIDCLCQRGLVD 446
Query: 316 --------------DETVKLALDMLDDFSGEAR---------KYAIKP----FSSVIRSL 348
V + +L+ F+ R KP ++ V+ L
Sbjct: 447 CGLEVLQEVPNYGCSPDVVMYTSLLNGFAEYGRVDDSLKLFKSMTCKPNTVTYNYVLMGL 506
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
C+++ A L+ +M+ + PP F+ +IS+ + G + A+++ + M+ G P+V
Sbjct: 507 CKVELWEDAGKLIDEMVGQECPPNEMTFSILISSLCQKGLVECAIDVFEKMQMYGCTPNV 566
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNE 468
Y+ L +G + G ++ A ++LN + + Y + ++G C+ E ++ A +L+ E
Sbjct: 567 IIYSTLNNGLSEKGCVDNALKLLNNMS---CKADTICYSSALKGLCRAELWEDAGELIVE 623
Query: 469 MKDVGVQPNVDEYNKLIQSLC 489
M P+ ++ +I +LC
Sbjct: 624 MFRKDCPPDEVTFSIIITNLC 644
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 113/237 (47%), Gaps = 11/237 (4%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V + L+ F++ G+ + ++F C N TY + + L + ++++ A + +
Sbjct: 464 VVMYTSLLNGFAEYGRVDDSLKLFKSMT---CKPNTVTYNYVLMGLCKVELWEDAGKLID 520
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY--PPQSVVAFLISSLCQ 314
+M+ P+ +IS C+ G + A V+ + +MY P ++ +++
Sbjct: 521 EMVGQECPPNEMTFSILISSLCQKGLVECAIDVF---EKMQMYGCTPNVIIYSTLNNGLS 577
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
E V AL +L++ S +A +SS ++ LCR + A L+ +M + PP
Sbjct: 578 EKGCVDNALKLLNNMSCKADTIC---YSSALKGLCRAELWEDAGELIVEMFRKDCPPDEV 634
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
F+ +I+ + G + A E+ LM P++ Y+ L++G++ G +E+A ++L
Sbjct: 635 TFSIIITNLCQQGFVEYATEVSDLMLKYECTPNIVIYSSLINGFSEHGHLEDALKLL 691
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 103/239 (43%), Gaps = 49/239 (20%)
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV-FNSVISAYSKAGDMTPAMEM 395
A+ P + +I+ LC + A+ +L SE +AV N++++ Y +AG + A M
Sbjct: 92 AVVPCTLLIKKLCAAGRLADAEGVLRA--SEA---ADAVDHNTLVAGYCRAGRLADAERM 146
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA-----------------------C---- 428
L+ + + G DV TY L++GY GG++E+A C
Sbjct: 147 LRSLAASGAA-DVVTYNTLIAGYCRGGRLEDARLLVASMPPAPNSYAYNTLLKGLCSAKQ 205
Query: 429 -----EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
E++ E +N S +T+ LI +C+ D A+ +L+ M G P YN+
Sbjct: 206 WGDAEELVEEMTRNDSPPDDLTFGMLIHSFCQSGLVDRAMGILDRMSKCGCTPGAIVYNE 265
Query: 484 LIQSLCLKALD-WRTAEKLLEDMRLKG--LHLNGITRALIRAVKELEEDAIENGEALVE 539
+I C L + A L M K N + + L RA E EDA GE + E
Sbjct: 266 IIS--CFAELGRVKEALHLFSCMPCKPDIFSYNAVLKGLCRA--ERWEDA---GELITE 317
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 110/261 (42%), Gaps = 7/261 (2%)
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH 287
C ++ + I+ L +R + D V +++ G PD +++ F + G+ ++
Sbjct: 425 CAPDEMVFGLIIDCLCQRGLVDCGLEVLQEVPNYGCSPDVVMYTSLLNGFAEYGRVDDS- 483
Query: 288 VVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRS 347
L + P +++ LC+ E + A ++D+ G+ FS +I S
Sbjct: 484 --LKLFKSMTCKPNTVTYNYVLMGLCKV-ELWEDAGKLIDEMVGQECPPNEMTFSILISS 540
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
LC+ V A + KM G P +++++ + S+ G + A LKL+ + K D
Sbjct: 541 LCQKGLVECAIDVFEKMQMYGCTPNVIIYSTLNNGLSEKGCVDNA---LKLLNNMSCKAD 597
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
Y+ + G E+A E++ E + VT+ +I C+ + A ++ +
Sbjct: 598 TICYSSALKGLCRAELWEDAGELIVEMFRKDCPPDEVTFSIIITNLCQQGFVEYATEVSD 657
Query: 468 EMKDVGVQPNVDEYNKLIQSL 488
M PN+ Y+ LI
Sbjct: 658 LMLKYECTPNIVIYSSLINGF 678
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 69/175 (39%), Gaps = 39/175 (22%)
Query: 362 SKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG 421
S+ ++ PP N + + + GD+ A++++ M P V T L+
Sbjct: 50 SRWVNPRVPPRRGAANDRLHHFIRLGDLDAALQLVGSMSE---PPAVVPCTLLIKKLCAA 106
Query: 422 GQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV------- 474
G++ +A +L ++ + V ++TL+ GYC+ A ++L + G
Sbjct: 107 GRLADAEGVLRASEAADA----VDHNTLVAGYCRAGRLADAERMLRSLAASGAADVVTYN 162
Query: 475 ------------------------QPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
PN YN L++ LC A W AE+L+E+M
Sbjct: 163 TLIAGYCRGGRLEDARLLVASMPPAPNSYAYNTLLKGLC-SAKQWGDAEELVEEM 216
>gi|413951894|gb|AFW84543.1| hypothetical protein ZEAMMB73_135692 [Zea mays]
Length = 575
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 173/422 (40%), Gaps = 65/422 (15%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGV-LTVEILNELIALFSKLGKGKAAFEVF 220
D L +C + W++ +G E+GV L V N LIA ++K G + A E++
Sbjct: 88 DGLDMLVCRLCWDHRLDDAWEL--RLGAIEQGVPLRVTGFNALIAAYNKEGLHEEASELY 145
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGS-------------LPDS 267
G + T+ + I L + D A + E M+ G D
Sbjct: 146 RIINKLGLTPSSSTFNYLIMGLCNQVRLDEAQLLLEHMVSKGYCLSTSFTICLDAYFRDG 205
Query: 268 EKVGKIISWFCKG----------------GKAK-----EAHVVYTLAREKKMYPPQSVVA 306
VG + W G G+++ EA+ + + + P
Sbjct: 206 NAVGALKCWDDMGKIDLQTDFIAFSAYINGRSRLDYVNEAYQAFAEMTSRGIVPNNITYN 265
Query: 307 FLISSLCQE---DETVKLALDMLDDFSGEARKYAIKP--FSS--VIRSLCRMKDVHGAKT 359
+IS+LC+ E KL +M R+ + P ++S +I LCR +
Sbjct: 266 SIISALCKAGNMTEAFKLEQNM--------RQSGLVPDIYTSNILIDGLCREGKLKMVDN 317
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
LL M S G P +N++I+AY +A DM AM + M G +PD++TY M
Sbjct: 318 LLLDMCSNGLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAGCEPDIFTYNIWMHSLY 377
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
+ +A ++L+E + VTY+TL+ G C + D A+ L + + +PN
Sbjct: 378 RNHMLNQAGKLLDELVAVDCSPNSVTYNTLMDGICS-DVLDRAMILTGRLIKMAFKPNTI 436
Query: 480 EYNKLIQSLCL-----KALDWRTAEKLLEDMRLKGLHLNGITRALIR-AVKELEEDAIEN 533
N + C +AL W AEKL ED + G TR +I A +E+E+D N
Sbjct: 437 TLNVFLSHFCKQGFGNRALMW--AEKLREDSYV----FYGATRNIIDWARREMEDDPQAN 490
Query: 534 GE 535
E
Sbjct: 491 NE 492
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 3/131 (2%)
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A+ L +M G FN +I Y+K+G M A + M++RGL PD T+ +
Sbjct: 4 ARRLFDQMAQVGIQVNTITFNVLIDGYAKSGQMHQASAAYREMQARGLVPDSCTFNIIA- 62
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
A + A +++++ S +S L+ C D A +L + GV
Sbjct: 63 --ARAHKFRYAAQLVHDHDMFSSHMSADGLDMLVCRLCWDHRLDDAWELRLGAIEQGVPL 120
Query: 477 NVDEYNKLIQS 487
V +N LI +
Sbjct: 121 RVTGFNALIAA 131
>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
Length = 1039
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 128/300 (42%), Gaps = 41/300 (13%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
GC N TY I L + A + ++M G +P +I +CK G+ K+A
Sbjct: 283 GCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDA 342
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLC--QEDETVKLALDMLDDFSGEARKYAIKPFSSV 344
+ TL P LI LC + DE A ++L+ + F+++
Sbjct: 343 LGIKTLMEGNGCNPDDWTYNSLIHGLCGGKPDE----AEELLNGAIARGFSPTVITFTNI 398
Query: 345 IRSLCRMKDV---------------------HG--------------AKTLLSKMISEGP 369
I C+ + + +G AK L+++ + G
Sbjct: 399 INGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGL 458
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
P ++ S+I AY K G + A+E+ KL G +P+ +TY+ L+ G ++ +A
Sbjct: 459 SPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMA 518
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
++ + +++ +TY TLI+G CK EFD A +L M+ G+ P+ YN L +LC
Sbjct: 519 LITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALC 578
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 151/376 (40%), Gaps = 54/376 (14%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETY--------------------- 235
V I +I + K+GK AA EVF GC N TY
Sbjct: 462 VVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALIT 521
Query: 236 -------------YFT-IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
Y T I+ ++ FD A+ + E M + G PD + + CK G
Sbjct: 522 KMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSG 581
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+A+EA Y+ +K + + L+ + T + A +++ E K +
Sbjct: 582 RAEEA---YSFLVKKGVVLTKVTYTSLVDGFSKAGNT-EFAAALIEKMVNEGCKADSHTY 637
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
S ++++LC+ K ++ A ++L +M G + +IS K G A M M S
Sbjct: 638 SVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMIS 697
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G KP TYT +S Y G++EEA ++ E ++N VTY+ I G + DC
Sbjct: 698 SGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDC 757
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL------------DW---RTAEKLLEDMR 506
A L M D +PN Y L++ +L +W T +LLE M
Sbjct: 758 AFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMV 817
Query: 507 LKGLHLNGITRALIRA 522
GL+ +T + I A
Sbjct: 818 KHGLNPTAVTYSSIIA 833
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 130/300 (43%), Gaps = 13/300 (4%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A + + G + + Y + +L R + + + ++++ G LPD+ +I
Sbjct: 132 AIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIM 191
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA--LDMLDDFSGEA 333
+CK G AH + L RE M L+ C+ + K L M+
Sbjct: 192 AYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRR 251
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
+Y+ ++ +I+ LC + V A LL M+ +G P + +I K G + A
Sbjct: 252 NEYS---YTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDAR 308
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
+L M RG+ P V+TY ++ GY G++++A I + N TY++LI G
Sbjct: 309 VLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGL 368
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
C + D A +LLN G P V + +I C AEK+ + +R+K + ++
Sbjct: 369 CGGKP-DEAEELLNGAIARGFSPTVITFTNIINGYC-------KAEKIDDALRVKSIMIS 420
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 150/365 (41%), Gaps = 35/365 (9%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGV-LTVEILNELIALFSKLGKGKAAFEVF 220
+ L A+C S +E Y+ +VK KGV LT L+ FSK G + A +
Sbjct: 571 NVLTDALCKSGRAEEAYSF--LVK------KGVVLTKVTYTSLVDGFSKAGNTEFAAALI 622
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
K + GC A+ TY ++AL ++K + A S+ ++M G + IIS K
Sbjct: 623 EKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKE 682
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
GK A ++ P ISS C+ ++ GE + + P
Sbjct: 683 GKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGR-----IEEAGHLIGEMERNGVAP 737
Query: 341 ----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG--------- 387
++ I M + A + L +MI P + ++ + K
Sbjct: 738 DVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDT 797
Query: 388 -------DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ ++L+ M GL P TY+ +++G+ ++EEAC +L+
Sbjct: 798 SGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDIS 857
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+ Y LI+ C ++ F+ A + M + G QP+++ Y+ LI LC + D+ A+
Sbjct: 858 PNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEG-DYDKAKA 916
Query: 501 LLEDM 505
L D+
Sbjct: 917 LFCDL 921
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 107/231 (46%), Gaps = 5/231 (2%)
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS-GEARKYAIKP- 340
A A ++ LAR + +V +IS E ++ A+D + ++ A+ P
Sbjct: 91 ASHAALLQLLARRRAPANYDKLVVSMISC-SGTAEDMREAVDAIQAIRRAGGKRLALSPK 149
Query: 341 -FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
++ +RSL R L S+++ EG P +N++I AY K G + A +L+
Sbjct: 150 CYNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLL 209
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
R G++ D YT L+ GY G + +AC +L R + +Y LI+G C+
Sbjct: 210 RESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCV 269
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
AL LL M G PN+ Y LI+ LC K A LL++M +G+
Sbjct: 270 REALVLLLMMLQDGCSPNLHTYTLLIRGLC-KEGRIHDARVLLDEMPRRGV 319
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 129/336 (38%), Gaps = 42/336 (12%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
TV +I + K K A V + C + + Y I L ++ A
Sbjct: 391 TVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTL 450
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
++ G P+ II +CK GK A V+ L + P
Sbjct: 451 NEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWT----------- 499
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+SS+I L + + +H A L++KM +G PG
Sbjct: 500 -------------------------YSSLIYGLIQDQKLHKAMALITKMQEDGITPGVIT 534
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+ ++I K + A + ++M GL PD Y L G+ EEA L
Sbjct: 535 YTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---V 591
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
K L+ VTY +L+ G+ K + A L+ +M + G + + Y+ L+Q+LC K
Sbjct: 592 KKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALC-KQKKL 650
Query: 496 RTAEKLLEDMRLKGLHLNGITRALI--RAVKELEED 529
A +L+ M L+G+ N + +I +KE + D
Sbjct: 651 NEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHD 686
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 99/259 (38%), Gaps = 19/259 (7%)
Query: 187 IGEKEKGVLTVEIL--NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSR 244
IGE E+ + +++ N I +G AF + D C N TY+ ++ +
Sbjct: 727 IGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLK 786
Query: 245 RKI----------------FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHV 288
+ D W + E+M++ G P + II+ FCK + +EA V
Sbjct: 787 MSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACV 846
Query: 289 VYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSL 348
+ K + P + + LI C + + + A + + + ++ + +I L
Sbjct: 847 LLDHMLGKDISPNEEIYTMLIKCCC-DIKLFEKAASFVTNMIECGFQPHLESYHYLITGL 905
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
C D AK L ++ + + KAG + ++L M +R + D
Sbjct: 906 CDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLSAMENRHCRIDS 965
Query: 409 YTYTGLMSGYANGGQMEEA 427
TY+ + + M E+
Sbjct: 966 ETYSMVTNNIHEASGMYES 984
>gi|449503427|ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71060, mitochondrial-like [Cucumis sativus]
Length = 542
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 191/440 (43%), Gaps = 28/440 (6%)
Query: 65 PETDFSSRSFGENEYAQMDPSADAVESKEEEAYEIDGDKLENVLSLLQSSVDGYLESSLD 124
P +++S + A + E+ EI D E L+ + + +ES LD
Sbjct: 56 PNRNYTSHRSTHHRIEHSKQDLKASQKSIVESDEIAQDA-EKFCKLISKNPNSCIESLLD 114
Query: 125 SFELDLHEDFVLKVLETPLVLGENLVCFFKWV--------TSGVVDALLKAICSSVGK-K 175
++L +++VL+ G + FF+W T+ + L++A+ GK K
Sbjct: 115 GAPMELSPALIVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEAL----GKIK 170
Query: 176 EVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETY 235
+ +W++V ++ K KG+L+ E + +++ K K A E F K +G +
Sbjct: 171 QFNVIWNLVSDM--KRKGILSRETFALITRRYARARKVKEAVESFEKMEKFGFQMGVSDF 228
Query: 236 YFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE 295
++ L + + A V +KM PD + ++ + + + + VY R+
Sbjct: 229 NRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRD 288
Query: 296 KKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKP--FSSVIRSLCR 350
+ P LI++ C+ DE ++L +M EA+ P F ++I L
Sbjct: 289 EGFEPDVVTFGILINAHCKARKYDEAIRLFHEM------EAKNIKPSPHVFCTLINGLGS 342
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
K + A ++ G P +N+V+ AY + M A M+ MR G+ P+ T
Sbjct: 343 EKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRT 402
Query: 411 YTGLMSGYANGGQMEEACEILNE-AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
Y ++ G + +EA + +++ + TY +IR +C E D A+++ +EM
Sbjct: 403 YDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEM 462
Query: 470 KDVGVQPNVDEYNKLIQSLC 489
K GV P + ++ LI SLC
Sbjct: 463 KAKGVLPGMHLFSTLINSLC 482
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 112/241 (46%), Gaps = 2/241 (0%)
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAF-LISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
GK K+ +V++ L + K S F LI+ VK A++ + + +
Sbjct: 167 GKIKQFNVIWNLVSDMKRKGILSRETFALITRRYARARKVKEAVESFEKMEKFGFQMGVS 226
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
F+ ++ +LC+ ++V A+ + KM P + ++ + + ++ E+ + M
Sbjct: 227 DFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREM 286
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
R G +PDV T+ L++ + + +EA + +E + + + SP + TLI G +
Sbjct: 287 RDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRL 346
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRAL 519
AL+ ++K G P YN ++ + C ++ A +++++MR G+ N T +
Sbjct: 347 KEALEFFEQLKLSGFAPEAPTYNAVVGAYCW-SMKMAYAYRMVDEMRKSGVGPNSRTYDI 405
Query: 520 I 520
I
Sbjct: 406 I 406
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 2/183 (1%)
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
K A E F + G TY + A +A+ + ++M ++G P+S I
Sbjct: 347 KEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDII 406
Query: 274 ISWFCKGGKAKEAHVVYT-LAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
+ KG K+KEA+ V+ ++RE P S +I C E E V +A+ + D+ +
Sbjct: 407 LHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNE-ERVDMAIQIWDEMKAK 465
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
+ FS++I SLC + A T +M+ G P +F+++ A G A
Sbjct: 466 GVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTA 525
Query: 393 MEM 395
+ M
Sbjct: 526 LLM 528
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 137/316 (43%), Gaps = 4/316 (1%)
Query: 209 KLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSE 268
K G+ A + NK A+ Y I+ L + K D A+ + KM G PD
Sbjct: 227 KRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVF 286
Query: 269 KVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDD 328
+IS C G+ +A + + EK + P LI + +E + V+ A + D+
Sbjct: 287 TYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVE-AEKLYDE 345
Query: 329 FSGEARKYA-IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG 387
+ + ++++I+ C+ K V + +M G + ++I + +A
Sbjct: 346 MVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQAR 405
Query: 388 DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYH 447
D A + K M S G+ PD+ TY L+ G N G +E A + +K +L VTY
Sbjct: 406 DCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYT 465
Query: 448 TLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRL 507
T+I CK + + L + GV+PNV Y ++ C K L A+ L +M+
Sbjct: 466 TMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLK-EEADALFVEMKE 524
Query: 508 KG-LHLNGITRALIRA 522
G L +G LIRA
Sbjct: 525 DGPLPNSGTYNTLIRA 540
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 147/322 (45%), Gaps = 3/322 (0%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
++ LN L+ F + A + ++ + G + T+ + L + A ++
Sbjct: 144 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 203
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
E+M+ G PD G +I+ CK G+ A + + K+ + +I LC+
Sbjct: 204 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKY 263
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ + A D+ + + K + ++ +I LC A LLS M+ + P
Sbjct: 264 -KHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVF 322
Query: 376 FNSVISAYSKAGDMTPAMEML-KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
FN++I A+ K G + A ++ ++++S+ PDV Y L+ G+ ++EE E+ E
Sbjct: 323 FNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREM 382
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
+ + VTY TLI G+ + + D A + +M GV P++ YN L+ LC +
Sbjct: 383 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNG-N 441
Query: 495 WRTAEKLLEDMRLKGLHLNGIT 516
TA + E M+ + + L+ +T
Sbjct: 442 VETALVVFEYMQKRDMKLDIVT 463
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 149/333 (44%), Gaps = 3/333 (0%)
Query: 189 EKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
EK K V I N +I K AF++FNK G + TY I L +
Sbjct: 242 EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRW 301
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYT-LAREKKMYPPQSVVAF 307
A + M+E PD +I F K GK EA +Y + + K +P
Sbjct: 302 SDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNT 361
Query: 308 LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
LI C+ + V+ +++ + S ++++I + +D A+ + +M+S+
Sbjct: 362 LIKGFCKY-KRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD 420
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P +N ++ G++ A+ + + M+ R +K D+ TYT ++ G++E+
Sbjct: 421 GVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG 480
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
++ + + VTY T++ G+C+ + A L EMK+ G PN YN LI++
Sbjct: 481 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
Query: 488 LCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
L+ D + +L+++MR G + T L+
Sbjct: 541 R-LRDGDEAASAELIKEMRSCGFAGDASTFGLV 572
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 151/356 (42%), Gaps = 36/356 (10%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
++L++ +K+ K + + + G N TY I RR A ++ KM+
Sbjct: 78 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMM 137
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEA--------------------HVVYTLAREKKMY 299
+ G P + +++ FC G + EA +V+ L + K
Sbjct: 138 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 197
Query: 300 PPQSVVAFLISSLCQEDETV--------------KLALDMLDDFSGEARKYAIKPFSSVI 345
++V ++ CQ D LAL++L+ + + ++++I
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
LC+ K + A L +KM ++G P +N +IS G + A +L M + +
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNIN 317
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNE-AKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
PD+ + L+ + G++ EA ++ +E K H V Y+TLI+G+CK + + ++
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
+ EM G+ N Y LI +A D A+ + + M G+H + +T ++
Sbjct: 378 VFREMSQRGLVGNTVTYTTLIHGF-FQARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 139/304 (45%), Gaps = 17/304 (5%)
Query: 240 EALSRRKI----FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE 295
E LSR+ + D A + M+++ P + K++S K K +V +L +
Sbjct: 44 ENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFD---LVISLGEQ 100
Query: 296 KK---MYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMK 352
+ + + I+ C+ + + LAL +L +I +S++ C
Sbjct: 101 MQNLGISHNLYTYSIFINYFCRRSQ-LSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGN 159
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT 412
+ A L+ +M+ G P F +++ + + A+ +++ M +G +PD+ TY
Sbjct: 160 RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG 219
Query: 413 GLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
+++G G+ + A +LN+ +K V Y+T+I G CK + D A L N+M+
Sbjct: 220 AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETK 279
Query: 473 GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH-----LNGITRALIRAVKELE 527
G++P+V YN LI LC W A +LL DM K ++ N + A ++ K +E
Sbjct: 280 GIKPDVFTYNPLISCLCNYG-RWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVE 338
Query: 528 EDAI 531
+ +
Sbjct: 339 AEKL 342
>gi|255660814|gb|ACU25576.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 418
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 100/176 (56%), Gaps = 1/176 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F+ ++ S C+ ++ A+++ + G P FN++++ Y K GD+ + M+
Sbjct: 139 FNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQ 198
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+ G++PDVYTY+ L++G +M++A E+ +E N + VT+ TLI G+CK D
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A+++ +M + P++ YN LI LC K D + A+ L+++M +KGL + IT
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG-DLKQAQDLIDEMSMKGLKPDKIT 313
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 128/284 (45%), Gaps = 18/284 (6%)
Query: 235 YYFTI--EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTL 292
Y+F I + + A SV + + + G P +++ + K G E +
Sbjct: 137 YFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNA 196
Query: 293 AREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKP----FSSVI 345
+ + P + LI+ LC+E D+ +L +MLD+ + P F+++I
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDN--------GLVPNGVTFTTLI 248
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
C+ V A + +M+S+ P +N++I K GD+ A +++ M +GLK
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLK 308
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
PD TYT L+ G G +E A E K + RL V Y LI G C+ A K+
Sbjct: 309 PDKITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
L EM VG++ + Y +I C K W T KL+++M+ G
Sbjct: 369 LREMLSVGLKLEIGTYTMIINEFCKKGDVW-TGSKLMKEMQRDG 411
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 123/280 (43%), Gaps = 1/280 (0%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
N L+ F K G+ + A VF+ +G + ++ + + + + + M
Sbjct: 138 FFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAM 197
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+G PD +I+ CK K +A+ ++ + + P LI C+
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR- 256
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
V LA+++ ++ + ++++I LC+ D+ A+ L+ +M +G P + +
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 316
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I K GD+ A E K+M ++ D YT L+SG G+ +A ++L E
Sbjct: 317 LIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
+L TY +I +CK + KL+ EM+ G P+V
Sbjct: 377 LKLEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSV 416
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 100/202 (49%), Gaps = 8/202 (3%)
Query: 301 PQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
P S+ F L+ S C+E E ++LA + D + + ++ F++++ ++ D++
Sbjct: 133 PASLYFFNILMHSFCKEGE-IRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGF 191
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
L + M + G P ++ +I+ K M A E+ M GL P+ T+T L+ G+
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251
Query: 419 ANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
G+++ A EI + LSP +TY+TLI G CK + A L++EM G++P
Sbjct: 252 CKNGRVDLAMEIYKQMLSQ--SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKP 309
Query: 477 NVDEYNKLIQSLCLKALDWRTA 498
+ Y LI C K D TA
Sbjct: 310 DKITYTTLIDGSC-KEGDLETA 330
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 127/284 (44%), Gaps = 5/284 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ + C + +++D + + G + +V N L+ + KLG F + N
Sbjct: 140 NILMHSFCKEGEIRLAQSVFDAITKWGLRP----SVVSFNTLMNGYIKLGDLNEGFRLKN 195
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G + TY I L + D A + ++M++ G +P+ +I CK G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ A +Y + + P LI LC++ + +K A D++D+ S + K +
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD-LKQAQDLIDEMSMKGLKPDKITY 314
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+++I C+ D+ A MI E + + ++IS + G A +ML+ M S
Sbjct: 315 TTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
GLK ++ TYT +++ + G + +++ E +++ S VT
Sbjct: 375 VGLKLEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 54/235 (22%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS-EGPPPGNAVFNSV-------------- 379
++ ++ + ++I LC + + AKTL+ ++S +G +AVF ++
Sbjct: 10 RHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKDSASAVFAAILETRGTQRSDIYVF 69
Query: 380 ---ISAYSKAGDMTPAMEMLKLMRSR---------------------------------- 402
I+AY ++G + A+E +L +
Sbjct: 70 SGLITAYLESGFLRDAIECXRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLE 129
Query: 403 -GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G +Y + LM + G++ A + + K R S V+++TL+ GY KL + +
Sbjct: 130 CGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNE 189
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+L N M+ GVQP+V Y+ LI LC K A +L ++M GL NG+T
Sbjct: 190 GFRLKNAMQASGVQPDVYTYSVLINGLC-KESKMDDANELFDEMLDNGLVPNGVT 243
>gi|222622724|gb|EEE56856.1| hypothetical protein OsJ_06476 [Oryza sativa Japonica Group]
Length = 538
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 135/294 (45%), Gaps = 12/294 (4%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+ ++ G+ A + F++ G N + I+ +RR FD AW + K
Sbjct: 98 NTLVNALAEAGREGEALKAFDEMLASGVAPNASSQNILIKMHARRSEFDLAWELIHK--- 154
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
+G PD +I+ C+ GK EA V EK P ++ + C++ V+
Sbjct: 155 SGVEPDVGTYSTLIAGLCRAGKIVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVE 214
Query: 321 LALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
L M E + P ++ +IR+LC + +L + ++ P +
Sbjct: 215 AKLLM-----AEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTY 269
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N ++ K G A+E+L +M GL+P YT++ L++ + ++ +A +L + +
Sbjct: 270 NIYMNGLCKKGKAKEALELLDVMLGEGLEPTAYTWSILLNCLCHSSRLLDAIYLLERSTE 329
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
V Y+T++ C++ ++ +KLL +M G++PN +N LI+SLC+
Sbjct: 330 LKWYAGVVAYNTVMSSLCEMGKWRGIMKLLTDMIKKGIEPNTRTFNILIRSLCV 383
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 135/305 (44%), Gaps = 10/305 (3%)
Query: 159 GVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFE 218
G L+ +C + GK + W ++ + EK + V+ ++ + + G+ A
Sbjct: 162 GTYSTLIAGLCRA-GK--IVEAWGVLDWMLEKNCRPM-VQTYTPIVQAYCRDGRIVEAKL 217
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+ + GC+ N TY I AL FD V + P + ++ C
Sbjct: 218 LMAEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNGLC 277
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA- 337
K GKAKEA + + + + P + L++ LC + A+ +L+ S E + YA
Sbjct: 278 KKGKAKEALELLDVMLGEGLEPTAYTWSILLNCLCHSSRLLD-AIYLLER-STELKWYAG 335
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+ +++V+ SLC M G LL+ MI +G P FN +I + G + A
Sbjct: 336 VVAYNTVMSSLCEMGKWRGIMKLLTDMIKKGIEPNTRTFNILIRSLCVGGKSSLAKS--- 392
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
L+ S G +V TY L+ + G++ EA +++ ++ + VTY +I G C+
Sbjct: 393 LIHSLGFAANVVTYNILLHWFYYHGKLTEANRLISVMEEKNIAPDEVTYTIIIDGLCRER 452
Query: 458 EFDCA 462
+FD A
Sbjct: 453 KFDAA 457
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 32/154 (20%)
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAM----EML--------------------------- 396
G PP +N++++A ++AG A+ EML
Sbjct: 89 GAPPNVLCYNTLVNALAEAGREGEALKAFDEMLASGVAPNASSQNILIKMHARRSEFDLA 148
Query: 397 -KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
+L+ G++PDV TY+ L++G G++ EA +L+ + + R TY +++ YC+
Sbjct: 149 WELIHKSGVEPDVGTYSTLIAGLCRAGKIVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCR 208
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A L+ EM+ +G PNV YN LI++LC
Sbjct: 209 DGRIVEAKLLMAEMERLGCLPNVVTYNVLIRALC 242
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 1/153 (0%)
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P ++++I+ +AG + A +L M + +P V TYT ++ Y G++ EA
Sbjct: 156 GVEPDVGTYSTLIAGLCRAGKIVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEA 215
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
++ E ++ + VTY+ LIR C ++FD ++L E +P+ YN +
Sbjct: 216 KLLMAEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNG 275
Query: 488 LCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
LC K + A +LL+ M +GL T +++
Sbjct: 276 LCKKG-KAKEALELLDVMLGEGLEPTAYTWSIL 307
>gi|15239614|ref|NP_197396.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635758|sp|Q8GYM2.2|PP393_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g18950
gi|332005249|gb|AED92632.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 483
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 183/417 (43%), Gaps = 29/417 (6%)
Query: 126 FELDLHEDFVLKVLETPLVLGENL---------VCFFKWVTSGV--------VDALLKAI 168
++ L DF PL GE L + FF+W+ S ++ L A+
Sbjct: 64 WQQTLVSDFPSFDFADPLFFGELLKSQNNVLFSLWFFRWLCSNYDYTPGPVSLNILFGAL 123
Query: 169 CSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGC 228
+ K V A + G K + L L + + S+ G + A EV+N D G
Sbjct: 124 ---LDGKAVKAAKSFLDTTGFKPEPTL----LEQYVKCLSEEGLVEEAIEVYNVLKDMGI 176
Query: 229 VANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHV 288
++ T + + + D W + ++M+E S DSE++ +I C GG E +
Sbjct: 177 SSSVVTCNSVLLGCLKARKLDRFWELHKEMVE--SEFDSERIRCLIRALCDGGDVSEGYE 234
Query: 289 VYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSL 348
+ ++ + P Q V A LIS C+ ++ ++L ++ + +I+ L
Sbjct: 235 LLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMS-EVLHTMIAWNHFPSMYIYQKIIKGL 293
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
C K A + + +G P V+ ++I + + G + A ++ M +G++P+
Sbjct: 294 CMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNE 353
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNE 468
+ Y ++ G+ G++ NE +N + ++ +T+I+G+C + D A ++
Sbjct: 354 FAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKN 413
Query: 469 MKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITR-ALIRAVK 524
M + GV PN YN LI+ C K KL ++++ GL +G+ AL+R +K
Sbjct: 414 MSETGVTPNAITYNALIKGFC-KENKVEKGLKLYKELKALGLKPSGMAYAALVRNLK 469
>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
Japonica Group]
gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
Length = 551
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 134/284 (47%), Gaps = 12/284 (4%)
Query: 233 ETYYFT--IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
+ Y+++ I A R A V ++ + G P+ G +I+ FCK G+ + A ++
Sbjct: 247 DVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLV 306
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVK-LALDMLDDFSG-EARKYAIKPFSSVIRSL 348
T + + + Q V +I C+++ K L + M+ + G E Y + +R
Sbjct: 307 TDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRA 366
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
RM + AK LL MI +G P + + ++IS + GDM A + + M G +P +
Sbjct: 367 NRMDE---AKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSL 423
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNE 468
TY +M GY G + EA NE +K +Y L+ G+C + D AL+L E
Sbjct: 424 VTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEE 483
Query: 469 MKDVGVQPNVDEYNKLIQSLCLKALDWRTAE--KLLEDMRLKGL 510
MK G +PN+ Y LI L A + R+ E +L ++M GL
Sbjct: 484 MKQRGSKPNLVAYTALISGL---AKEGRSEEAFQLYDNMLGDGL 524
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 124/283 (43%), Gaps = 16/283 (5%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
TY ++ LS + +V E+M D +I+ +C+ G + A V+
Sbjct: 215 TYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDEC 274
Query: 294 REKKMYPPQSVVAFLISSLC---QEDETVKLALDMLDDFSGEARKYAIKP--FSSVIRSL 348
+ P + LI+ C Q + L DM + R I F+++I
Sbjct: 275 VGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDM------QVRGVGINQIVFNTMIDGY 328
Query: 349 CRMKDVHGAKTLLSKMISE--GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
CR V K L KMI E G +N++ +A M A +L++M +G++P
Sbjct: 329 CRKNMVD--KALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRP 386
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
+ +YT L+S + N G M EA + E N + S VTY+ ++ GY K A +
Sbjct: 387 NHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFK 446
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
NEM+ G+ P++ Y L+ C+ A +L E+M+ +G
Sbjct: 447 NEMEKKGLVPDIYSYAALVHGHCVNG-KVDVALRLFEEMKQRG 488
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 133/304 (43%), Gaps = 2/304 (0%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
+ K G+ A ++ ++ +G N Y ++A +R K D + + M G P
Sbjct: 153 YCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPT 212
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
++ + V+ + K + + +I++ C+ V+ A ++
Sbjct: 213 VGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAG-NVRRASEVF 271
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
D+ G + + ++I C++ + A+ L++ M G VFN++I Y +
Sbjct: 272 DECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRK 331
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
+ A+E+ +M G++ DVYTY L G +M+EA +L + R + V+Y
Sbjct: 332 NMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSY 391
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
TLI +C + A +L EM G +P++ YN ++ +K R AE+ +M
Sbjct: 392 TTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGY-IKKGSIREAERFKNEME 450
Query: 507 LKGL 510
KGL
Sbjct: 451 KKGL 454
>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 932
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 166/378 (43%), Gaps = 55/378 (14%)
Query: 115 VDGYLESSLDSFELDLHEDFVLKVLETPLVLGENLVCFFKWVTSGVVDALLKAICSSVGK 174
++G+L+ + + EDF L+ +VL N++ F G +D +AIC
Sbjct: 501 INGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAF--CGMGNMD---RAIC----- 550
Query: 175 KEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQET 234
+V+++ +KE+ T +I F++ G+ + A E+F+ GC+ T
Sbjct: 551 --------MVRQM-QKERHRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHT 601
Query: 235 YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR 294
Y I L ++ A ++ ++M G P+ ++ + G ++A +T+ R
Sbjct: 602 YNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLR 661
Query: 295 EKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDV 354
E + + + ++++S C+ +
Sbjct: 662 ------------------------------------NEGLEIDVYTYEALLKSCCKSGRM 685
Query: 355 HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
A + +M ++ P V+N +I +++ GD+ A ++++ MR GL PD++TYT
Sbjct: 686 QSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSF 745
Query: 415 MSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV 474
++ G M++A EI+ E + + + + TY TLI G+ + + AL EMK G
Sbjct: 746 INACCKAGDMQKATEIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAGF 805
Query: 475 QPNVDEYNKLIQSLCLKA 492
+P+ Y+ L+ SL +A
Sbjct: 806 KPDKAVYHCLVTSLLSRA 823
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 132/345 (38%), Gaps = 49/345 (14%)
Query: 178 YALWDIVKEIGEKEKGVLTVEILNE------------LIALFSKLGKGKAAFEVFNKFGD 225
+ + D IG +EK ++ + L E LI L++K+GK A E+
Sbjct: 428 HTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLINLYTKVGKVSKALEISKMMKM 487
Query: 226 YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKE 285
G N +TY I + K + A+SV E + G PD II+ FC G
Sbjct: 488 SGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMGNMDR 547
Query: 286 AHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVI 345
A +C M+ E + + F +I
Sbjct: 548 A-------------------------IC-----------MVRQMQKERHRPTTRTFLPII 571
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
R ++ A + M G P +N++I + MT A+ +L M G+
Sbjct: 572 HGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVG 631
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
P+ +TYT LM GYA+ G E+A + + + TY L++ CK AL +
Sbjct: 632 PNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAV 691
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
EM + N YN LI + W A+ L++ MR +GL
Sbjct: 692 TKEMSAKNIPRNTFVYNILIDGWARRGDVWEAAD-LMQQMRKEGL 735
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 142/299 (47%), Gaps = 4/299 (1%)
Query: 190 KEKGV-LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
KE+G+ +T+ + ++ F+K+G AA F + + N Y I A +
Sbjct: 346 KEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHCQICNM 405
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF- 307
D A ++ +M E G + ++ + G ++ +V+ +E +P SV+++
Sbjct: 406 DRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFP--SVISYG 463
Query: 308 LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
+ +L + V AL++ K+ +K +S +I ++KD A ++ +
Sbjct: 464 CLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKD 523
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P ++N++I+A+ G+M A+ M++ M+ +P T+ ++ G+A G+M A
Sbjct: 524 GLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRA 583
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
EI + +++ + TY+ LI G + + A+ +L+EM GV PN Y L+Q
Sbjct: 584 LEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQ 642
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 82/157 (52%)
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
+K A K + +++ R D+H A+ M + G P + V++S+I AY+ DM A+
Sbjct: 280 KKPARKEYGLMVKYYGRRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEAL 339
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
++ M+ G++ + TY+ ++ G+A G + A EAK+ L+ V Y +I +
Sbjct: 340 HCVRKMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAH 399
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
C++ D A L+ EM++ G+ +D Y+ ++ +
Sbjct: 400 CQICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTM 436
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 108/259 (41%), Gaps = 2/259 (0%)
Query: 252 WSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISS 311
W E P ++ G ++ ++ + G A + R + + P V + LI +
Sbjct: 269 WQAVVTAFERIKKPARKEYGLMVKYYGRRGDMHHARQTFESMRARGIEPSSHVYSSLIHA 328
Query: 312 LCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
+ ++ AL + E + I +S ++ +M + A + + P
Sbjct: 329 YAVGRD-MEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSL 387
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
++ +I A+ + +M A +++ M +G+ + Y +M GY G E+ +
Sbjct: 388 NAVIYGGIIYAHCQICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVF 447
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
+ K+ S ++Y LI Y K+ + AL++ MK G++ N+ Y+ LI LK
Sbjct: 448 DRLKECGFFPSVISYGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGF-LK 506
Query: 492 ALDWRTAEKLLEDMRLKGL 510
DW A + ED GL
Sbjct: 507 LKDWANAFSVFEDFTKDGL 525
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 160/355 (45%), Gaps = 14/355 (3%)
Query: 158 SGVVDALLKAICSSVGKKEVYALWD--IVKEIGEKEKGVLTVEILNELIALFSKLGKGKA 215
S ++DAL K S E Y L+ VK I V + LI F GK K
Sbjct: 203 STIIDALCKYQLVS----EAYGLFSEMTVKGISAD------VVTYSTLIYGFCIEGKLKE 252
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A + N+ N TY ++AL + A SV M++ PD ++
Sbjct: 253 AIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMD 312
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
+ + K+A V+ + P LI+ C+ ++ V AL++ + +
Sbjct: 313 GYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCK-NKMVDEALNLFKEMHQKNMV 371
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
I +SS+I LC+ + L+ +M G P ++S+I K G + A+ +
Sbjct: 372 PGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIAL 431
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
M+ + ++P+++T+T L+ G GG++++A E+ + L+ TY+ +I G+CK
Sbjct: 432 FNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCK 491
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+ AL +L++M+D G PN + +I +L K + AEKLL M +GL
Sbjct: 492 QGLLEEALTMLSKMEDNGCIPNAFTFETIIIAL-FKKDENDKAEKLLRQMIARGL 545
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 133/290 (45%), Gaps = 1/290 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N+++ F+K+ A + ++ G + T I + +SV K++
Sbjct: 62 FNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKIL 121
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G PD+ + +I C G+ K+A + + Q A LI+ +C+ +T
Sbjct: 122 KRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDT- 180
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
+ A+ +L G K ++ +S++I +LC+ + V A L S+M +G ++++
Sbjct: 181 RGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTL 240
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I + G + A+ +L M + + P+VYTY L+ G+++EA +L K
Sbjct: 241 IYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACV 300
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ +TY TL+ GY + E A + N M +GV P+V Y LI C
Sbjct: 301 KPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFC 350
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 89/179 (49%), Gaps = 1/179 (0%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
I F+ ++ S +MK A +L ++ +G P N +I+ + G +T +L
Sbjct: 59 IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLA 118
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
+ RG PD T L+ G GQ+++A ++ +L+ V+Y TLI G CK+
Sbjct: 119 KILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIG 178
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ A+KLL ++ +PNV+ Y+ +I +LC L A L +M +KG+ + +T
Sbjct: 179 DTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQL-VSEAYGLFSEMTVKGISADVVT 236
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 1/155 (0%)
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+++V A + ++M+ P FN ++ +++K + A+ + + +G++PD+ T
Sbjct: 37 IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT 96
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
L++ + + GQ+ +L + K VT +TLI+G C + AL +++
Sbjct: 97 LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
G Q N Y LI +C K D R A KLL +
Sbjct: 157 AQGFQLNQVSYATLINGVC-KIGDTRGAIKLLRKI 190
>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 525
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 148/329 (44%), Gaps = 5/329 (1%)
Query: 161 VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVF 220
++ LL +I + V +L + G + ++T+ I I + LG+ AF V
Sbjct: 58 LNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIF---INSLTHLGQMGLAFSVM 114
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
K G + T ++ L + A ++ + + G D G +I+ CK
Sbjct: 115 AKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKM 174
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
GK ++A + + + P + ++ LC+E V A + + G+ +
Sbjct: 175 GKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEG-LVTEACGLCSEMVGKGICIDVFT 233
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMI-SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
++S+I C GA LL++M+ E P FN ++ A K G + A + LM
Sbjct: 234 YNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLM 293
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
RGL+PDV + LM+G+ G M EA E+ + + + ++Y TLI GYCK++
Sbjct: 294 IKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMV 353
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
D AL+LL EM + P+ YN L+ L
Sbjct: 354 DEALRLLTEMHQRNLVPDTVTYNCLLDGL 382
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 155/356 (43%), Gaps = 15/356 (4%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
L+K +C E L+D G V ++N L K+GK + A E+ K
Sbjct: 131 TLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGL----CKMGKTRDAIELLRK 186
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G N Y ++ L + + A +C +M+ G D +I FC G+
Sbjct: 187 MEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQ 246
Query: 283 AKEA-HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP- 340
+ A ++ + ++ + P L+ +LC+ + + + + F G K ++P
Sbjct: 247 FQGAVRLLNEMVMKEDVRPDVYTFNILVDALCK----LGMVAEARNVF-GLMIKRGLEPD 301
Query: 341 ---FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
++++ C + AK + +M+ G P ++++I+ Y K + A+ +L
Sbjct: 302 VVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLT 361
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M R L PD TY L+ G + G++ +++ + + +TY+ L+ Y K E
Sbjct: 362 EMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRE 421
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
D AL L + D G+ PN+ YN LI LC K + A+++ + + +KG N
Sbjct: 422 CLDKALALFQHIVDTGISPNIRTYNILIDGLC-KGGRMKAAKEIFQLLSVKGCRPN 476
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 78/196 (39%), Gaps = 37/196 (18%)
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKA------------------------------ 386
A + +M+ PPP N ++S+ K
Sbjct: 39 AVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIFI 98
Query: 387 ------GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
G M A ++ + RG D +T T LM G G+ EA + + A
Sbjct: 99 NSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFS 158
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
V Y TLI G CK+ + A++LL +M+ GV+PN+ YN ++ LC + L A
Sbjct: 159 FDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGL-VTEACG 217
Query: 501 LLEDMRLKGLHLNGIT 516
L +M KG+ ++ T
Sbjct: 218 LCSEMVGKGICIDVFT 233
>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
Length = 987
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 133/298 (44%), Gaps = 8/298 (2%)
Query: 195 LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSV 254
L + + LI K G+ A + ++ G V + TY I+ + A +
Sbjct: 282 LNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGI 341
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
M + G PD +I C GGK EA + A + P LI+ C+
Sbjct: 342 KALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCK 400
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSL---CRMKDVHGAKTLLSKMISEGPPP 371
E + AL + + K ++ + +I L CR+K+ AK L++M + G P
Sbjct: 401 A-ERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKE---AKETLNEMFANGLAP 456
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
++ S+I Y K G + A+E+ KLM G P+ +TY L+ G ++ +A ++
Sbjct: 457 NVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALI 516
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ +++ + Y TLI+G CK EFD A +L M+ G+ P+ YN L +LC
Sbjct: 517 TKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALC 574
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 148/376 (39%), Gaps = 54/376 (14%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETY--------------------- 235
V I +I + K+G AA EVF GC N TY
Sbjct: 458 VVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALIT 517
Query: 236 -------------YFT-IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
Y T I+ ++ FD A+ + E M + G PD + + CK G
Sbjct: 518 KMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSG 577
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+A+EA Y+ K + + L+ + T A +++ E K + +
Sbjct: 578 RAEEA---YSFLVRKGVVLTKVTYTSLVDGFSKAGNT-DFAAVLIEKMVNEGCKADLYTY 633
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
S ++++LC+ K ++ A ++L +M G + +IS K G A + M S
Sbjct: 634 SVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMIS 693
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G KP TYT +S Y GQ+EEA ++ E +++ VTYH I G + D
Sbjct: 694 SGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDR 753
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL------------DW---RTAEKLLEDMR 506
A L M D +PN Y L++ +L +W T +LLE M
Sbjct: 754 AFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMM 813
Query: 507 LKGLHLNGITRALIRA 522
GL+ +T + I A
Sbjct: 814 KHGLNPTVVTYSSIIA 829
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 130/297 (43%), Gaps = 17/297 (5%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A + + G V + + Y + +L R + ++ + +++ G LPD+ +I
Sbjct: 128 AIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIM 187
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA--LDMLDDFSGEA 333
+CK G AH + L RE M L+ C+ + K L M+
Sbjct: 188 AYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRR 247
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
+Y+ ++ +I+ L + V A L+ M+ +G ++ +I K G + A
Sbjct: 248 NEYS---YTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDAR 304
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
+L M RG+ P V+TY ++ GY G+M++A I ++N TY++LI G
Sbjct: 305 GLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGL 364
Query: 454 C--KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLK 508
C KL+E A +LLN G P V + LI C AE++ + +R+K
Sbjct: 365 CGGKLDE---AEELLNGAIARGFTPTVITFTNLINGYC-------KAERIDDALRVK 411
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 154/365 (42%), Gaps = 35/365 (9%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEI-LNELIALFSKLGKGKAAFEVF 220
+ L A+C S +E Y+ +V+ KGV+ ++ L+ FSK G A +
Sbjct: 567 NVLTDALCKSGRAEEAYSF--LVR------KGVVLTKVTYTSLVDGFSKAGNTDFAAVLI 618
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
K + GC A+ TY ++AL ++K + A S+ ++M +G + IIS K
Sbjct: 619 EKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKE 678
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
GK A ++ P + ISS C+ + ++ + GE + + P
Sbjct: 679 GKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQ-----IEEAEHLIGEMERDGVTP 733
Query: 341 ----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG--------- 387
+ I M + A + L +M+ P + ++ + K
Sbjct: 734 DVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDT 793
Query: 388 -------DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
++ ++L+ M GL P V TY+ +++G+ ++EEAC +L+
Sbjct: 794 SGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAIS 853
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+ Y LI+ C ++ F + + +M + G QP ++ Y+ LI LC + D+ A+
Sbjct: 854 PNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEG-DYDRAKS 912
Query: 501 LLEDM 505
L D+
Sbjct: 913 LFCDL 917
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 104/234 (44%), Gaps = 11/234 (4%)
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDF---SGEARKYAIK 339
A A ++ LAR + +V +IS E V+ A+D + G+ + K
Sbjct: 87 ASHAALLQLLARRRAPANYDKLVLSMISC-SGTAEDVREAVDAIQAIRRVGGKRLVLSPK 145
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
++ +RSL R L S ++ EG P +N++I AY K G + A L+
Sbjct: 146 CYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLL 205
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
R G++ D YT L+ GY + +AC +L R + +Y LI+G L E
Sbjct: 206 RESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQG---LYEA 262
Query: 460 DC---ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
C AL L+ M G N+ Y LI+ LC K A LL++M L+G+
Sbjct: 263 RCVREALVLVFMMVQDGCSLNLHMYTLLIKGLC-KEGRIHDARGLLDEMPLRGV 315
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 168/378 (44%), Gaps = 18/378 (4%)
Query: 143 LVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNE 202
+VL +NL + VTS ++ +L +G+ + +A + +G V + +
Sbjct: 109 MVLQQNLRSQWDKVTSTIISSL-----GRLGRSD-WAQLIFDRAVGAGFGN--NVFVYSS 160
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + + GK A E+F C N Y I+A S+ + A + +M+E G
Sbjct: 161 LICAYGRSGKLAKAVEIFEAM-KVVCKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQG 219
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD +IS + + +E ++ E+ + LI++ C+ + + L
Sbjct: 220 MSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQ-MHLG 278
Query: 323 LDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+++ A+ I+P +S++I ++ H A L +M ++ P +N+
Sbjct: 279 AALMETM---AKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNT 335
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
++ +++ G+ A + + M G D+ TY L+ Y G+ EA +L E K+
Sbjct: 336 MVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRG 395
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
+ + +TY LI YCK A+ L ++K G+QP+V Y+ L+ C K A
Sbjct: 396 ASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDG-CCKNGSPDEA 454
Query: 499 EKLLEDMRLKGLHLNGIT 516
LLE+M G+ N IT
Sbjct: 455 LALLEEMADNGIRPNVIT 472
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 139/298 (46%), Gaps = 18/298 (6%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK- 257
+ N +I SK G A +F + + G ++ T+ I A R W C++
Sbjct: 191 VYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRAN----RWEECDRI 246
Query: 258 ---MIETGSLPDSEKVGKIISWFCKGGKAK-EAHVVYTLAREKKMYPPQSVVAFLISSLC 313
M E G D +I+ +C+GG+ A ++ T+A+ + P SV+ + S++
Sbjct: 247 FAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEP--SVITY--STMI 302
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
+ LA + + F E R ++P +++++ R+ + A ++ M G
Sbjct: 303 DGYAKLGLAHEAIALFQ-EMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGF 361
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
+N+++ +Y K G AM +L+ M+ RG P++ TY+ L+ Y G +A
Sbjct: 362 AKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMA 421
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
+ + KK + V Y TL+ G CK D AL LL EM D G++PNV YN L+ +
Sbjct: 422 LFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDA 479
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 129/304 (42%), Gaps = 29/304 (9%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N ++ + ++LG A + + G + TY +++ ++ F A S+ E+M +
Sbjct: 334 NTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQ 393
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DE 317
G+ P+ +I +CK G ++A ++ ++ + P + + L+ C+ DE
Sbjct: 394 RGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDE 453
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTL-------------LSKM 364
+ L +M D+ I+P SL D +G + L L ++
Sbjct: 454 ALALLEEMADN--------GIRPNVITYNSLL---DAYGRQCLMVRKTFPKLRFFLLPRV 502
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
P S++ K + A + + M G+KP+V T++ +++ ++ +
Sbjct: 503 TMLLKPSMQDDQQSLVDPKQKQALVLAAARVFREMAKNGVKPNVVTFSSILNACSHCASV 562
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
E+A +L + R+ VT H L+ G+ ++ + A L NE+ +G V YN L
Sbjct: 563 EDASNLLEAMRVFDGRVYGVT-HGLLMGF-RIRVWRDAETLFNELTTLGHNTAVAFYNAL 620
Query: 485 IQSL 488
L
Sbjct: 621 TDVL 624
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 168/381 (44%), Gaps = 24/381 (6%)
Query: 143 LVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGV---LTVEI 199
+VL +NL + VTS ++ +L +G+ D + I ++ G V +
Sbjct: 110 MVLQQNLRSQWDKVTSTIISSL-----GRLGRS------DWAQLIFDRAVGAGFGNNVFV 158
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
+ LI + + GK A E+F C N Y I+A S+ + A + +M+
Sbjct: 159 YSSLICAYGRSGKLAKAVEIFEAM-KVVCKPNLVVYNAVIDACSKGGDYPTALRIFREML 217
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
E G PD +IS + + +E ++ E+ + LI++ C+ + +
Sbjct: 218 EQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQ-M 276
Query: 320 KLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
L +++ A+ I+P +S++I ++ H A L +M ++ P
Sbjct: 277 HLGAALMETM---AKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGIC 333
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N+++ +++ G+ A + + M G D+ TY L+ Y G+ EA +L E K
Sbjct: 334 YNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMK 393
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+ + + +TY LI YCK A+ L ++K G+QP+V Y+ L+ C K
Sbjct: 394 QRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDG-CCKNGSP 452
Query: 496 RTAEKLLEDMRLKGLHLNGIT 516
A LLE+M G+ N IT
Sbjct: 453 DEALALLEEMADNGIRPNVIT 473
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 139/298 (46%), Gaps = 18/298 (6%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK- 257
+ N +I SK G A +F + + G ++ T+ I A R W C++
Sbjct: 192 VYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRAN----RWEECDRI 247
Query: 258 ---MIETGSLPDSEKVGKIISWFCKGGKAK-EAHVVYTLAREKKMYPPQSVVAFLISSLC 313
M E G D +I+ +C+GG+ A ++ T+A+ + P SV+ + S++
Sbjct: 248 FAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEP--SVITY--STMI 303
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
+ LA + + F E R ++P +++++ R+ + A ++ M G
Sbjct: 304 DGYAKLGLAHEAIALFQ-EMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGF 362
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
+N+++ +Y K G AM +L+ M+ RG P++ TY+ L+ Y G +A
Sbjct: 363 AKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMA 422
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
+ + KK + V Y TL+ G CK D AL LL EM D G++PNV YN L+ +
Sbjct: 423 LFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDA 480
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 130/301 (43%), Gaps = 23/301 (7%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N ++ + ++LG A + + G + TY +++ ++ F A S+ E+M +
Sbjct: 335 NTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQ 394
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DE 317
G+ P+ +I +CK G ++A ++ ++ + P + + L+ C+ DE
Sbjct: 395 RGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDE 454
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSL-------CRMKDVHGAKT---LLSKMISE 367
+ L +M D+ I+P SL C M + K LL ++
Sbjct: 455 ALALLEEMADN--------GIRPNVITYNSLLDAYGRQCLMVRKNFPKLRFFLLPRVTML 506
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
P + S++ K + A + + M G+KP+V T++ +++ ++ +E+A
Sbjct: 507 LKPSVDYDQQSLVDPKQKQALVLAAARVFREMAKNGVKPNVVTFSSILNACSHCASVEDA 566
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
+L + R+ VT H L+ G+ ++ + A L NE+ +G V YN L
Sbjct: 567 SSLLEAMRVFDGRVYGVT-HGLLMGF-RIRVWRDAETLFNELTTLGHNTAVAFYNALTDV 624
Query: 488 L 488
L
Sbjct: 625 L 625
>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
Length = 538
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 132/301 (43%), Gaps = 14/301 (4%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
TV I N +I + + A++V K + V N TY + L R A V
Sbjct: 87 TVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVF 146
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVA--FLISSLC 313
++M G P+ G +I + G+ EA + + ++ + P V+ ++ LC
Sbjct: 147 QEMKRNGCKPNPITYGTLIQHLSRAGEIDEA--LRVMIEQRSLELPTDVITCTTIVGGLC 204
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE-----G 368
+ LD F E R+ ++P +L HG + + E G
Sbjct: 205 KASR-----LDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKG 259
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
A + + A KAG + A + ++ +R G+ PDV TY+ L++ +A GQ + +
Sbjct: 260 GSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASL 319
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
E+L + ++N + VTY TLI CK +F A +LL M+ G PNV YN ++ L
Sbjct: 320 ELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGL 379
Query: 489 C 489
C
Sbjct: 380 C 380
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 107/231 (46%), Gaps = 2/231 (0%)
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
++E G+ DS+ + + + K E ++TL + + ++ ++ LC
Sbjct: 10 VVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAG- 68
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
AL+++ + SG + ++ +I LCR V A +L KM+ E P +
Sbjct: 69 MANQALELVRELSG-VYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYT 127
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+++ ++ A E+ + M+ G KP+ TY L+ + G+++EA ++ E +
Sbjct: 128 ILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSL 187
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+T T++ G CK D ALK + EM+ +GV+PN Y+ L+
Sbjct: 188 ELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGF 238
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 121/318 (38%), Gaps = 45/318 (14%)
Query: 212 KGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL---PDSE 268
K K A EVF + GC N TY I+ LSR D A V MIE SL D
Sbjct: 138 KTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRV---MIEQRSLELPTDVI 194
Query: 269 KVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA------ 322
I+ CK + +A R+ + P + + L+ Q E ++
Sbjct: 195 TCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEE 254
Query: 323 -------------------------LDMLDDFSGEARKYAIKP----FSSVIRSLCRMKD 353
LD E R+ + P +S +I + R
Sbjct: 255 KARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQ 314
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
+ LL M G P ++++I+ K A +L+LM + G P+V TY
Sbjct: 315 FDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNS 374
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKD 471
+M G G+M+E + K SR SP VTY ++ G K D A+KL +K
Sbjct: 375 VMDGLCKSGKMDEVHRVYEMMLK--SRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKS 432
Query: 472 VGVQPNVDEYNKLIQSLC 489
P+ Y+ +I SLC
Sbjct: 433 SREGPDAAAYSMVITSLC 450
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 122/297 (41%), Gaps = 6/297 (2%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE--KMIETGSLPDSEKVGKI 273
A + + G N+ TY + + D E K + GSL + G
Sbjct: 212 ALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPG-Y 270
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEA 333
+ CK G A R+ + P + LI++ + + +L++L+D
Sbjct: 271 LDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQ-FDASLELLEDMRRNG 329
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
K + +S++I LC+ + A LL M + G PP +NSV+ K+G M
Sbjct: 330 VKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVH 389
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
+ ++M PDV TY+ +M+G + G ++ A ++ K + Y +I
Sbjct: 390 RVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSL 449
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNV-DEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
C+ + + A + + M+ N+ L+ +LC A +A +++E R +G
Sbjct: 450 CRAGKLEEACGMYHGMEVTVAGDNICRALAGLVAALC-DAKRTDSARRIVEVARERG 505
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 72/161 (44%), Gaps = 2/161 (1%)
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
AK L ++ G + F + + + + + + L+ SRG+ TY ++
Sbjct: 2 AAKLLERSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVV 61
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
G G +A E++ E ++ + Y+ +I G C+ A K+L +M + +
Sbjct: 62 DGLCGAGMANQALELVRELSGVYTP-TVFIYNGIITGLCRASRVMDAYKVLEKMVEESIV 120
Query: 476 PNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
PNV Y L+ LC ++ + A ++ ++M+ G N IT
Sbjct: 121 PNVFTYTILLNGLC-RSNKTKLAREVFQEMKRNGCKPNPIT 160
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 135/309 (43%), Gaps = 2/309 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LIA+FS+ A F +G V + Y + R A + ++M+E G
Sbjct: 264 LIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQG 323
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+ D I++ CK +A ++ E+ P LI CQ+ K A
Sbjct: 324 CVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTK-A 382
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
L + + K I ++++I C++ ++ A L MIS P + + +I+A
Sbjct: 383 LSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINA 442
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y G ++ A + +M +G+KP + T ++ GY G +A E L
Sbjct: 443 YCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPD 502
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
++Y+TLI G+ + + D A +N+M+ G+ P++ YN ++ C + + AE +L
Sbjct: 503 HISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQG-RMQEAELVL 561
Query: 503 EDMRLKGLH 511
M KG++
Sbjct: 562 RKMIEKGIN 570
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 23/348 (6%)
Query: 160 VVDALLKAICSSVGKKEV--------YALWDIVKEIGE-----KEKGVL-TVEILNELIA 205
VV+AL+ ++C + G + Y ++E E + KG L ++ N L+
Sbjct: 32 VVEALVSSMCGNCGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLG 91
Query: 206 LFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLP 265
K+ + A+EV + G N T + AL + FD S +M G
Sbjct: 92 GLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYA 151
Query: 266 DSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK---LA 322
D +I +C+ G +EA + +K + P +I+ LC++ + +
Sbjct: 152 DMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGIL 211
Query: 323 LDMLD-DFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
++ML+ S + Y ++++ CR + AK + +M+ +G P F+S+I+
Sbjct: 212 IEMLNIGLSPDTTTY-----NTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIA 266
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
+S+ + A+ + M+ GL PD YT LM GY G M EA +I +E + L
Sbjct: 267 VFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVL 326
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ Y+T++ G CK + A KL +EM + G P+ + LI C
Sbjct: 327 DVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHC 374
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 130/289 (44%), Gaps = 1/289 (0%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
I L+ + + G A ++ ++ + GCV + Y + L + K+ A + ++M
Sbjct: 295 IYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEM 354
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+E G+LPD +I C+ G +A ++ ++ + P LI C+ E
Sbjct: 355 VERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEM 414
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
K A ++ D + +I + C + V A L MI +G P N+
Sbjct: 415 EK-ASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNT 473
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
VI Y ++GD + A E L M ++G+ PD +Y L++G+ M++A +N+ +K
Sbjct: 474 VIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEG 533
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
+TY+ ++ G+C+ A +L +M + G+ P+ Y LI
Sbjct: 534 LLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALING 582
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 18/200 (9%)
Query: 304 VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSK 363
VV L+SS+C T L D+L IR+ + + +
Sbjct: 32 VVEALVSSMCGNCGTNNLVFDLL------------------IRTYVQARKLREGTEAFRI 73
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
+ S+G NS++ K + A E+ + + G++ +VYT +++ G+
Sbjct: 74 LRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGK 133
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
++ L+E + N VTY+TLI YC+ + A +++N M D G++P++ YN
Sbjct: 134 FDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNA 193
Query: 484 LIQSLCLKALDWRTAEKLLE 503
+I LC K R L+E
Sbjct: 194 IINGLCKKGRYARAKGILIE 213
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 120/471 (25%), Positives = 201/471 (42%), Gaps = 29/471 (6%)
Query: 56 NPKDESSFSPETDFSSRSFGENEYAQMDPSADAVESKEEEAYEIDGDKLENVLSLLQSSV 115
+P D S+FSP T + R + +YA + + S + D D + + L++
Sbjct: 34 HPND-STFSPSTP-TPRDLSQ-DYAFLRNTLINSTSPQSTPSSGD-DAISTISKALKTGF 89
Query: 116 DGYLESSLDSFELDLHEDFVLKVLETPLVLGENLVCFFKWV--------TSGVVDALLKA 167
+ F L++ V++V+ + E V FF W T V D LL
Sbjct: 90 NIETHQFFRQFRNQLNDSLVVEVMNN-VKNPELCVKFFLWAGRQIGYSHTPQVFDKLLDL 148
Query: 168 ICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYG 227
+ +V + L + EI + + +L +LN L+ + G A E + D+G
Sbjct: 149 LGCNVNADDRVPL-KFLMEIKDDDHELLR-RLLNFLVRKCCRNGWWNMALEELGRLKDFG 206
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH 287
+Q TY I+ R D A+ V +M+ + D + CKGGK +EA
Sbjct: 207 YKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCREA- 265
Query: 288 VVYTLAREKKMYPPQSVV-AFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
+ L E + + P +V ++S LC E + A+D+L + + + ++
Sbjct: 266 --FDLIDEAEDFVPDTVFYNRMVSGLC-EASLFEEAMDILHRMRSSSCIPNVVTYRILLS 322
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
R + K +LS MI+EG P +FNS+I AY K+ D + A ++ K M G +P
Sbjct: 323 GCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQP 382
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR-------LSPVTYHTLIRGYCKLEEF 459
Y + G + + + +IL+ +K +S L+ V R C +F
Sbjct: 383 GYLVYN-IFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKF 441
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
D A K++ EM G P+ Y+K+I LC A A L E+M+ G+
Sbjct: 442 DQAFKIICEMMGKGFVPDDSTYSKVIGFLC-DASKVEKAFSLFEEMKRNGI 491
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 171/414 (41%), Gaps = 42/414 (10%)
Query: 128 LDLHEDFVLKVLETPLVLGE-NLVCFFKWVT-SGVVDALLKAICSSVGKKEVYALWDIVK 185
LDL E ++L+ +VL + N+ F + + +G D K IC +GK V K
Sbjct: 406 LDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSK 465
Query: 186 EIG-----------------EKEKGVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYG 227
IG K G++ +V LI F K G + A + F++ G
Sbjct: 466 VIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKG 525
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH 287
C N TY I A + K A + E M+ G P+ +I CK G+ ++A
Sbjct: 526 CTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKAC 585
Query: 288 VVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRS 347
+Y R + D LD + + +++
Sbjct: 586 QIYARMR---------------GDIESSDMDKYFKLD-----HNNCEGPNVITYGALVDG 625
Query: 348 LCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
LC+ V A LL M++ G P V+++VI + K G + A E+ M RG P+
Sbjct: 626 LCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPN 685
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
+YTY+ + +++ ++L++ +N + V Y ++ G CK+ + D A KL+
Sbjct: 686 LYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLML 745
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALI 520
+M++ G PNV Y +I K+ +L DM KG N IT R LI
Sbjct: 746 KMEEKGCNPNVVTYTAMIDGFG-KSGKIEQCLELFRDMCSKGCAPNFITYRVLI 798
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 130/275 (47%), Gaps = 4/275 (1%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
N TY ++ L + A + + M+ G P+ +I FCK GK ++A V+
Sbjct: 615 NVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVF 674
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
T E+ P + I L + D + L L +L + + ++ ++ LC+
Sbjct: 675 TKMSERGYSPNLYTYSSFIDCLFK-DNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCK 733
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ A L+ KM +G P + ++I + K+G + +E+ + M S+G P+ T
Sbjct: 734 IGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFIT 793
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
Y L++ + G ++EA ++L+E K+ + +++ +I G+ +EF ++ LL+E+
Sbjct: 794 YRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFS--QEFITSIGLLDELS 851
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
+ P VD +++ +KA A LLE++
Sbjct: 852 ENESVP-VDSLYRILIDNYIKAGRLEVALDLLEEI 885
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 102/242 (42%), Gaps = 15/242 (6%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
V I E++ K+GK A+++ K + GC N TY I+ + + +
Sbjct: 720 NVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELF 779
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLC 313
M G P+ +I+ C G EA+ + L K+ Y P+ +++ +I
Sbjct: 780 RDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKL--LDEMKQTYWPKHILSHRKIIEGFS 837
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
QE T ++ +LD+ S + +I + + + A LL ++ S P +
Sbjct: 838 QEFIT---SIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEISSS---PSH 891
Query: 374 AVFN-----SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
AV N S+I S A + A+E+ M S+ + P++ L+ G + +EA
Sbjct: 892 AVSNKYLYASLIENLSHASKVDKALELYASMISKNVVPELSILVHLIKGLIKVDKWQEAL 951
Query: 429 EI 430
++
Sbjct: 952 QL 953
>gi|357484175|ref|XP_003612374.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513709|gb|AES95332.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 161/359 (44%), Gaps = 54/359 (15%)
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM-IETGSLPDSEKVGKIISWFC 278
F+KF +Q TY I L + FD + ++M G+ P + I+
Sbjct: 64 FSKF-----THSQSTYRTLIHKLCIFRRFDTVKQLLDEMPTSIGANPGEDIFITIVRGLS 118
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML-----------D 327
+ G + V LA + P + ++ L +ED + +A + D
Sbjct: 119 RAGMTRRVITVLDLAYKFHGTPSLKIFNSILDVLVKED--IDMAREFYRKSMMESGVRGD 176
Query: 328 DFS--------------GEARKY-------AIKP----FSSVIRSLCRMKDVHGAKTLLS 362
D++ GE K + P +++++ +LCR V A++L++
Sbjct: 177 DYTFGILMKGLCLTNRIGEGFKLLQLIKNNGVTPNTVIYNTLLHALCRNGKVGRARSLMN 236
Query: 363 KMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG 422
+M+ P FN +IS+Y K ++ A+ +L+ + L PDV T T ++ N G
Sbjct: 237 EMVD----PNEVTFNILISSYYKEENLVQALVLLEKCFALSLVPDVVTVTKVVEILCNAG 292
Query: 423 QMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
++ EA E+L + L V Y+TLI+G+C + + L L +M++ G PNVD YN
Sbjct: 293 RVTEAAEVLERVESLGGSLDAVAYNTLIKGFCGVGKVKVGLHFLKQMENKGYLPNVDTYN 352
Query: 483 KLIQSLC-LKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAVKELEEDAIENGEALVE 539
LI C + LD A L DM+ G++ N +T +IR + E IE+G +++E
Sbjct: 353 ILIYGFCESRMLDL--ALDLFNDMKTDGINRNFVTFDTMIRGL--CSEGRIEDGFSILE 407
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 156/417 (37%), Gaps = 80/417 (19%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
L+K +C + E + L ++K G V I N L+ + GK A + N+
Sbjct: 183 LMKGLCLTNRIGEGFKLLQLIKNNGVTPNTV----IYNTLLHALCRNGKVGRARSLMNEM 238
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
D N+ T+ I + + + A + EK +PD V K++ C G+
Sbjct: 239 VD----PNEVTFNILISSYYKEENLVQALVLLEKCFALSLVPDVVTVTKVVEILCNAGRV 294
Query: 284 KEAH---------------VVY-TLAR------------------EKKMYPPQ-SVVAFL 308
EA V Y TL + E K Y P L
Sbjct: 295 TEAAEVLERVESLGGSLDAVAYNTLIKGFCGVGKVKVGLHFLKQMENKGYLPNVDTYNIL 354
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM--IS 366
I C E + LALD+ +D + F ++IR LC + ++L M
Sbjct: 355 IYGFC-ESRMLDLALDLFNDMKTDGINRNFVTFDTMIRGLCSEGRIEDGFSILELMEETK 413
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM---------RS---------------- 401
EG + +NS+I K A E L M RS
Sbjct: 414 EGSKGHISPYNSIIYGLFKQNRFDEASEFLAKMGKLFPRAVDRSMTIIQKCKEGAIEDAK 473
Query: 402 --------RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
G P + Y L+ G++ G + EA E++NE N+ T++ +I +
Sbjct: 474 NIYDKMIDEGGIPSILVYNSLVHGFSQHGSIREAVELINEMISNNCFPIASTFNAIITEF 533
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
C+ + + ALK + ++ G PN + Y+ LI LC K D + A ++ +M KG+
Sbjct: 534 CEQGKIESALKFMEDITARGCVPNTETYSPLIDVLCRKG-DIQKALQVFLEMVEKGI 589
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 136/323 (42%), Gaps = 17/323 (5%)
Query: 161 VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVF 220
V +++ +C++ E + + V+ +G G L N LI F +GK K
Sbjct: 281 VTKVVEILCNAGRVTEAAEVLERVESLG----GSLDAVAYNTLIKGFCGVGKVKVGLHFL 336
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ + G + N +TY I ++ D A + M G + +I C
Sbjct: 337 KQMENKGYLPNVDTYNILIYGFCESRMLDLALDLFNDMKTDGINRNFVTFDTMIRGLCSE 396
Query: 281 GKAKEAHVVYTLAREKK------MYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR 334
G+ ++ + L E K + P S++ L + DE + M G+
Sbjct: 397 GRIEDGFSILELMEETKEGSKGHISPYNSIIYGLFKQ-NRFDEASEFLAKM-----GKLF 450
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
A+ ++I+ C+ + AK + KMI EG P V+NS++ +S+ G + A+E
Sbjct: 451 PRAVDRSMTIIQK-CKEGAIEDAKNIYDKMIDEGGIPSILVYNSLVHGFSQHGSIREAVE 509
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
++ M S P T+ +++ + G++E A + + + + TY LI C
Sbjct: 510 LINEMISNNCFPIASTFNAIITEFCEQGKIESALKFMEDITARGCVPNTETYSPLIDVLC 569
Query: 455 KLEEFDCALKLLNEMKDVGVQPN 477
+ + AL++ EM + G+ P+
Sbjct: 570 RKGDIQKALQVFLEMVEKGILPD 592
>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 158/370 (42%), Gaps = 38/370 (10%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
T +I L+A++ K G KA + + D GC TY I+ L + + A+SV
Sbjct: 236 TAKIYTTLLAIYFKSGDEKA-LGLVQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVF 294
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
M++ G PD + +I+ F K G+ ++A ++ R K P +I +L +
Sbjct: 295 LNMLKDGCKPDVVLINNLINIFGKAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFES 354
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
A + + +S +I C+ V A LL +M +G PP A
Sbjct: 355 KAPASEAASWFEKMKANGVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAA 414
Query: 376 FNSVISAYSKA-----------------------------------GDMTPAMEMLKLMR 400
+ S+I+A KA G + A+++ M+
Sbjct: 415 YCSLINALGKAKRYEAANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMK 474
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G PDVY Y LMSG G +EEA L ++N +++ ++ G + +
Sbjct: 475 KIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPE 534
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RAL 519
A ++ +MKD ++P+ YN ++ SL + + A KL+ +M +G + IT ++
Sbjct: 535 QATEMFMKMKDSLIKPDAVSYNTILGSLSRSGM-FEEAAKLMREMGSRGFEYDHITYSSI 593
Query: 520 IRAVKELEED 529
+ AV +++ED
Sbjct: 594 LEAVGKVDED 603
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 135/295 (45%), Gaps = 16/295 (5%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSL----PDSEKVGKIISWFCKGGKAK---EA 286
TY I L +F W + ++M+ + + D +V KI+ GKAK +A
Sbjct: 97 TYMPLIRCLDDCGLFGEMWKMIQEMVRSPTCVIGPADLSEVVKIL------GKAKMVNKA 150
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA-IKPFSSVI 345
V+ + +K P S +I L QE K+ ++ + E + +S ++
Sbjct: 151 LSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIH-ELYHEMCNEGDCFPDTMTYSVLV 209
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
+ ++ A L +M + G P ++ ++++ Y K+GD A+ +++ M+ +G
Sbjct: 210 SAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKSGD-EKALGLVQEMKDKGCA 268
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
P V+TYT L+ G G++E+A + K+ + V + LI + K + ALKL
Sbjct: 269 PTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLEDALKL 328
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
++M+ + PNV YN +I++L A E M+ G+ + T +++
Sbjct: 329 FDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYSIL 383
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 128/313 (40%), Gaps = 40/313 (12%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYG-CVANQETYYFTIEALSRRKIFDWAWSV 254
T N +I + + G + E++++ + G C + TY + A + D+A +
Sbjct: 165 TASTYNSMILMLMQEGHHEKIHELYHEMCNEGDCFPDTMTYSVLVSAFVKLGRDDYAIRL 224
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
++M G P ++ +++ + K G K
Sbjct: 225 FDEMKANGLHPTAKIYTTLLAIYFKSGDEK------------------------------ 254
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
AL ++ + + + ++ +I+ L + V A ++ M+ +G P
Sbjct: 255 -------ALGLVQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVV 307
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG-YANGGQMEEACEILNE 433
+ N++I+ + KAG + A+++ MRS P+V TY ++ + + EA +
Sbjct: 308 LINNLINIFGKAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEK 367
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
K N S TY LI G+CK + AL LL EM + G P Y LI +L KA
Sbjct: 368 MKANGVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALG-KAK 426
Query: 494 DWRTAEKLLEDMR 506
+ A +L +++
Sbjct: 427 RYEAANELFLELK 439
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 122/299 (40%), Gaps = 35/299 (11%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKI-FDWAWSVC 255
V ++N LI +F K G+ + A ++F++ C N TY I+AL K A S
Sbjct: 306 VVLINNLINIFGKAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWF 365
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
EKM G P S +I FCK + ++A ++ EK P + LI++L +
Sbjct: 366 EKMKANGVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKA 425
Query: 316 ---DETVKLALDMLD---------------------------DFSGEARKYAIKP----F 341
+ +L L++ + D E +K P +
Sbjct: 426 KRYEAANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAY 485
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
++++ L R + A + L M G P N +++ ++ G A EM M+
Sbjct: 486 NALMSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKD 545
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+KPD +Y ++ + G EEA +++ E +TY +++ K++E D
Sbjct: 546 SLIKPDAVSYNTILGSLSRSGMFEEAAKLMREMGSRGFEYDHITYSSILEAVGKVDEDD 604
>gi|297808179|ref|XP_002871973.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297317810|gb|EFH48232.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 831
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 156/347 (44%), Gaps = 22/347 (6%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
+ +A++ A S + +++ +KE G K T N LI + K+GK + + +
Sbjct: 391 LFNAIINASSESGNLDQAMKIFEKMKESGCKP----TASTFNTLIKGYGKIGKLEESSRL 446
Query: 220 FNK-FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
D N T ++A ++ + AW++ KM G PD+ + +
Sbjct: 447 LEMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSFGVKPDAVTFNTLARAYS 506
Query: 279 KGGKAKEAH-VVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEAR 334
+ G A ++ K+ P +++ C+E +E ++ M +
Sbjct: 507 RIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM--------K 558
Query: 335 KYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
+ + P F+S+I+ + D+ G ++ M G P F+++++A+S GDM
Sbjct: 559 ELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMK 618
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
E+ + M G+ PD++ ++ L GYA G+ E+A +ILN+ +K R + V Y +I
Sbjct: 619 RCEEIYRDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQII 678
Query: 451 RGYCKLEEFDCALKLLNEMK-DVGVQPNVDEYNKLIQSLCLKALDWR 496
G+C E A+++ N+M+ VG+ PN+ Y LI W+
Sbjct: 679 SGWCSAGEMKKAMQVYNKMRGSVGLSPNLTTYETLIWGFGEAKQPWK 725
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 152/318 (47%), Gaps = 12/318 (3%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+++N LI + G+ + A +FN + G + TY + AL+R+K F S+
Sbjct: 323 TKLMNGLI----ERGRPQEAHSIFNTLIEEGHKPSIITYTTLVTALTRQKHFHSLLSLIS 378
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI---SSLC 313
K+ + G PD+ II+ + G +A ++ +E P S LI +
Sbjct: 379 KVQKNGLRPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIG 438
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
+ +E+ +L ML D E + + + ++++ C + + A ++ KM S G P
Sbjct: 439 KLEESSRLLEMMLRD---EMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSFGVKPDA 495
Query: 374 AVFNSVISAYSKAGDMTPAMEM-LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
FN++ AYS+ G A +M + M +KP+V T +++GY G+MEEA
Sbjct: 496 VTFNTLARAYSRIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFY 555
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
K+ + +++LI+G+ + + D ++++ M++ GV+P+V ++ L+ +
Sbjct: 556 RMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWS-SV 614
Query: 493 LDWRTAEKLLEDMRLKGL 510
D + E++ DM G+
Sbjct: 615 GDMKRCEEIYRDMLEGGI 632
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
DV + T LM+G G+ +EA I N + + S +TY TL+ + + F L L+
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSIITYTTLVTALTRQKHFHSLLSLI 377
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
++++ G++P+ +N +I + ++ + A K+ E M+ G
Sbjct: 378 SKVQKNGLRPDTILFNAIINA-SSESGNLDQAMKIFEKMKESG 419
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 133/292 (45%), Gaps = 2/292 (0%)
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+F KF G + T + +A+SV +++ G P++ + +I C
Sbjct: 85 LFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLC 144
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
G+ K+A + + Q LI+ LC+ ET +A +L G + K +
Sbjct: 145 FRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVA-RLLRKLEGHSVKPDV 203
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
++++I SLC+ K + A L S+MI +G P +N+++ + G + A +L
Sbjct: 204 VMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNE 263
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M+ + + PDV T+ L+ G+M+ A +L K + VTY++LI GY L +
Sbjct: 264 MKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNK 323
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
A + M GV PNV Y +I LC + + A L E+M+ K +
Sbjct: 324 VKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKM-VDEAMSLFEEMKYKNM 374
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 162/385 (42%), Gaps = 39/385 (10%)
Query: 161 VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVF 220
++ L+K +C K+ D V G + V ++N L K G+ KA +
Sbjct: 136 LNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGL----CKTGETKAVARLL 191
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
K + + Y I +L + K+ A + +MI G P+ ++ FC
Sbjct: 192 RKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIM 251
Query: 281 GKAKEAH--------------------VVYTLAREKKMYPPQSVVAFLISSLCQED---- 316
G KEA ++ L +E KM + V+A ++ + + D
Sbjct: 252 GHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTY 311
Query: 317 ----------ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
VK A + + ++ ++++I LC+ K V A +L +M
Sbjct: 312 NSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKY 371
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
+ P + S+I K + A+ + K M+ +G++PDVY+YT L+ GG++E
Sbjct: 372 KNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLEN 431
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A E L+ TY+ +I G CK + F A+ L ++M+ G P+ + +I
Sbjct: 432 AKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIIC 491
Query: 487 SLCLKALDWRTAEKLLEDMRLKGLH 511
+L K + + AEK+L +M +GL
Sbjct: 492 ALFEKDENDK-AEKILREMIARGLQ 515
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 167/371 (45%), Gaps = 29/371 (7%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L+ +C + + AL +KE G + V + IL + + K G+ + A E F +
Sbjct: 383 SLIDGLCKNHHLERAIALCKKMKEQG-IQPDVYSYTILLDALC---KGGRLENAKEFFQR 438
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII-SWFCKGG 281
G N +TY I L + +F A + KM G +PD+ II + F K
Sbjct: 439 LLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDE 498
Query: 282 KAKEAHVVYTL-------AREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR 334
K ++ + AR+ ++ + V+A +++ C + + V M F
Sbjct: 499 NDKAEKILREMIARGLQEARKVRLKEAKIVLA-VMTKACIKPDVVTYGTLMDGYFLVNEL 557
Query: 335 KYA---------------IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
K+A ++ ++ +I LC+ K V A +L +M + P + S+
Sbjct: 558 KHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSL 617
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I A K + A+ +LK M+ G++PDVY+YT L+ G G++E A EI
Sbjct: 618 IDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGY 677
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
L+ Y +I CK FD AL L +M+D G P+ ++ +I +L K + + AE
Sbjct: 678 HLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDK-AE 736
Query: 500 KLLEDMRLKGL 510
K+L +M +GL
Sbjct: 737 KILXEMIARGL 747
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 1/176 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F+ ++ SL K +L K S G P N +++ + +T A +L +
Sbjct: 66 FNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANIL 125
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
RG P+ T L+ G G++++A ++ +L+ V+Y TLI G CK E
Sbjct: 126 KRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETK 185
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+LL +++ V+P+V YN +I SLC L A L +M +KG+ N +T
Sbjct: 186 AVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKL-LGDACDLYSEMIVKGISPNVVT 240
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 1/145 (0%)
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
+M+ PPP FN ++S+ + + K S G PD+ T LM+ + +
Sbjct: 51 FDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCH 110
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
+ A +L K + +T +TLI+G C E AL +++ G Q N
Sbjct: 111 LTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVS 170
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDM 505
Y LI LC K + + +LL +
Sbjct: 171 YRTLINGLC-KTGETKAVARLLRKL 194
>gi|3107905|dbj|BAA25906.1| leaf protein [Ipomoea nil]
Length = 665
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 158/356 (44%), Gaps = 19/356 (5%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA---FE 218
+ ++ A C S KE ++ ++E G K T N LI F +GK + + E
Sbjct: 142 NPMINAFCESGNVKEAMKIFRKMREKGCKP----TASTFNALIKGFGIIGKPEESSKLLE 197
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+ ++ + + TY ++A + + AW V +M+ G PD I +
Sbjct: 198 IMSR--EENIKPDDRTYNILVQAWCNKNNIEKAWGVVHRMVGAGLKPDVVTYNTIARAYA 255
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
+G + A + + + K+ P ++ +E AL + G + +
Sbjct: 256 RGKETSRAAELISQMQNNKVAPNVRTCGIVVDGYSKEGNMAD-ALKFIYKMQG----FGV 310
Query: 339 KP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
P F+S+++ + D G L+ M G P ++++++A+S AG M E
Sbjct: 311 HPNLFIFNSLLKGFLDITDTKGVDETLTLMQEFGVKPDVVTYSTIMNAWSSAGLMEKCEE 370
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
M + M G++PD + ++ L GY G+ ++A +L + + + V + T+I G+C
Sbjct: 371 MFQDMIKSGIEPDNHAFSILAKGYVRAGEPKKAEALLEAMATHGAHPNVVMFTTIISGWC 430
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+ + AL++ + M + VQPN++ + LI W+ AE+LL+ M G+
Sbjct: 431 SAAKMEDALRVYDRMCRMDVQPNLNTFETLIWGYGEANEPWK-AEELLQIMEEMGV 485
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 155/325 (47%), Gaps = 15/325 (4%)
Query: 193 GVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAW 252
G TV +L+ + GK + + + G TY + AL+ +K F
Sbjct: 64 GCQTVRSRTKLMKTLIERGKPQEVHSITKGLTEEGHRPTLVTYTTVLAALTLQKRFKSIP 123
Query: 253 SVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISS- 311
+ +K+ + G PDS +I+ FC+ G KEA ++ REK P S LI
Sbjct: 124 LLLKKVEQNGLRPDSIFFNPMINAFCESGNVKEAMKIFRKMREKGCKPTASTFNALIKGF 183
Query: 312 --LCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMI 365
+ + +E+ KL L+++ +R+ IKP ++ ++++ C ++ A ++ +M+
Sbjct: 184 GIIGKPEESSKL-LEIM------SREENIKPDDRTYNILVQAWCNKNNIEKAWGVVHRMV 236
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
G P +N++ AY++ + + A E++ M++ + P+V T ++ GY+ G M
Sbjct: 237 GAGLKPDVVTYNTIARAYARGKETSRAAELISQMQNNKVAPNVRTCGIVVDGYSKEGNMA 296
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
+A + + + + + +++L++G+ + + + L M++ GV+P+V Y+ ++
Sbjct: 297 DALKFIYKMQGFGVHPNLFIFNSLLKGFLDITDTKGVDETLTLMQEFGVKPDVVTYSTIM 356
Query: 486 QSLCLKALDWRTAEKLLEDMRLKGL 510
+ L E++ +DM G+
Sbjct: 357 NAWSSAGL-MEKCEEMFQDMIKSGI 380
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 98/196 (50%), Gaps = 11/196 (5%)
Query: 332 EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
E + + +++V+ +L K LL K+ G P + FN +I+A+ ++G++
Sbjct: 97 EGHRPTLVTYTTVLAALTLQKRFKSIPLLLKKVEQNGLRPDSIFFNPMINAFCESGNVKE 156
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTL 449
AM++ + MR +G KP T+ L+ G+ G+ EE+ ++L E + P TY+ L
Sbjct: 157 AMKIFRKMREKGCKPTASTFNALIKGFGIIGKPEESSKLL-EIMSREENIKPDDRTYNIL 215
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE--------KL 501
++ +C + A +++ M G++P+V YN + ++ R AE K+
Sbjct: 216 VQAWCNKNNIEKAWGVVHRMVGAGLKPDVVTYNTIARAYARGKETSRAAELISQMQNNKV 275
Query: 502 LEDMRLKGLHLNGITR 517
++R G+ ++G ++
Sbjct: 276 APNVRTCGIVVDGYSK 291
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 85/235 (36%), Gaps = 36/235 (15%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
I N L+ F + K E ++G + TY + A S + + + + M
Sbjct: 316 IFNSLLKGFLDITDTKGVDETLTLMQEFGVKPDVVTYSTIMNAWSSAGLMEKCEEMFQDM 375
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
I++G PD+ + + + G+ K+A + +P + +IS C
Sbjct: 376 IKSGIEPDNHAFSILAKGYVRAGEPKKAEALLEAMATHGAHPNVVMFTTIISGWCS---- 431
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
A M D V +CRM DV P F +
Sbjct: 432 ---AAKMEDALR-------------VYDRMCRM-DVQ---------------PNLNTFET 459
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+I Y +A + A E+L++M G+ P T + + G + EA ILN+
Sbjct: 460 LIWGYGEANEPWKAEELLQIMEEMGVLPRKNTVQLVADAWRAIGFINEAKRILND 514
>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 418
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 165/391 (42%), Gaps = 57/391 (14%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L++ + S GK A++ + E ++ + + + LI + + G + A E F
Sbjct: 34 SLIQTVVSRKGKDSASAVFAAILETKGTQRS--DIYVFSGLITAYLESGFIRDAIECFRL 91
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ +T +E L + K F W ++++E G ++ FCK G+
Sbjct: 92 TKKHSFRVPFDTCRNVLEHLMKXKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGE 151
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAF----------------------------------- 307
+ A V+ + + P SVV+F
Sbjct: 152 MRLAQSVFDAITKWGLRP--SVVSFNTLMNGYIKLGDLDEGFRLKNAMRASGVQPDVYTY 209
Query: 308 --LISSLCQE---DETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAK 358
LI+ LC+E DE L +MLD+ + P F+++I C+ + A
Sbjct: 210 SVLINGLCKESRMDEANGLFGEMLDN--------GLVPNGVTFTTLIDGHCKNGRLDLAM 261
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+ +M+++G P +N++I K GD+ A +L M +GLKPD TYT L+ G
Sbjct: 262 DIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDGS 321
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G +E A E+ K RL V Y LI G C+ A K+L EM VG++P+
Sbjct: 322 CKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREMLRVGLKPDD 381
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
+ Y ++ C K D + A +LL +M+ G
Sbjct: 382 ETYTMIMNEFCKKG-DVKKASELLREMQRNG 411
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 134/280 (47%), Gaps = 4/280 (1%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSE--KVGKIISWFCKGGKAKEAHVVYTLAREK 296
I+ + RK D A +V ++ET S+ +I+ + + G ++A + L ++
Sbjct: 36 IQTVVSRKGKDSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFIRDAIECFRLTKKH 95
Query: 297 KMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHG 356
P ++ L + + KL + ++ F+ ++ C+ ++
Sbjct: 96 SFRVPFDTCRNVLEHL-MKXKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRL 154
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A+++ + G P FN++++ Y K GD+ + MR+ G++PDVYTY+ L++
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMRASGVQPDVYTYSVLIN 214
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
G +M+EA + E N + VT+ TLI G+CK D A+ + +M + G P
Sbjct: 215 GLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSP 274
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+V YN LI LC K D + A LL++M KGL + IT
Sbjct: 275 DVVTYNTLIYGLCKKG-DLKQARYLLDEMSRKGLKPDKIT 313
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 129/299 (43%), Gaps = 2/299 (0%)
Query: 180 LWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI 239
+W KEI E ++ N L+ F K G+ + A VF+ +G + ++ +
Sbjct: 120 VWGFYKEILECGYPA-SLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLM 178
Query: 240 EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
+ D + + M +G PD +I+ CK + EA+ ++ + +
Sbjct: 179 NGYIKLGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLV 238
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P LI C+ + LA+D+ + + ++++I LC+ D+ A+
Sbjct: 239 PNGVTFTTLIDGHCKNGR-LDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARY 297
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
LL +M +G P + ++I K GD+ A E+ + M ++ D YT L+ G
Sbjct: 298 LLDEMSRKGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLC 357
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G+ +A ++L E + + TY ++ +CK + A +LL EM+ G P V
Sbjct: 358 QEGRAVDAEKMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNGRVPCV 416
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 87/192 (45%), Gaps = 1/192 (0%)
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+F + D G V N T+ I+ + D A + +M+ G PD +I C
Sbjct: 228 LFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLC 287
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
K G K+A + K + P + LI C+E + ++ A ++ + E+ +
Sbjct: 288 KKGDLKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGD-LETAFELRERMIKESIRLDD 346
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
++++I LC+ A+ +L +M+ G P + + +++ + K GD+ A E+L+
Sbjct: 347 VVYTALIFGLCQEGRAVDAEKMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLRE 406
Query: 399 MRSRGLKPDVYT 410
M+ G P V T
Sbjct: 407 MQRNGRVPCVVT 418
>gi|449487636|ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g19290-like [Cucumis
sativus]
Length = 885
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 134/308 (43%), Gaps = 8/308 (2%)
Query: 191 EKGVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
EKG+ +V N +IA + G + AF + +G + T + +L R+ D
Sbjct: 460 EKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLD 519
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
AW MI+ G + ++ + + G A ++ + + ++P A I
Sbjct: 520 EAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFI 579
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKP---FSSVIRSLCRMKDVHGAKTLLSKMIS 366
+ LC L D D FS RK + ++S+I C++ ++ A L+ +M
Sbjct: 580 NGLCISG----LMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNK 635
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
G P N +I K G M A+E M GL PD+ TY L+ GY +
Sbjct: 636 RGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGG 695
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A +++ + + TY+ I GYC + + + A+ +L E+ VG+ PN YN +I
Sbjct: 696 ADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMIN 755
Query: 487 SLCLKALD 494
++C LD
Sbjct: 756 AVCNVILD 763
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 130/293 (44%), Gaps = 9/293 (3%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+L+ L+ F K A E+ +K + G N L R W + +
Sbjct: 189 VLDTLMQAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDV 248
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+ G P++ +I FC+ G + + + + + P +I++ C + ++
Sbjct: 249 VRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQS 308
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
AL +L+ K +I F ++I + C+ +V A+ ++ G V+N
Sbjct: 309 -SYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNI 367
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK-- 436
+IS Y KA D++ A + + MR++ + PD T+ L++G+ G+ E+ +L +
Sbjct: 368 MISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSG 427
Query: 437 --NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
+ S L VT + G C +D A+KLL + + G+ P+V +N +I +
Sbjct: 428 LLHDSSLCDVT----VAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAA 476
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 90/189 (47%), Gaps = 5/189 (2%)
Query: 332 EARKYAIKPFSSVI----RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG 387
+ R+ + P S I R L R D L ++ +GP P N FN +I + + G
Sbjct: 212 KMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFTFNLLILEFCRKG 271
Query: 388 DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYH 447
+L +M +PDVY+Y +++ GQ A +LN +N + S T+
Sbjct: 272 WTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFC 331
Query: 448 TLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRL 507
T+I +CK + A K +E++D+G+ N YN +I +KA D A L E+MR
Sbjct: 332 TIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGY-VKARDISQANLLFEEMRT 390
Query: 508 KGLHLNGIT 516
K + +GIT
Sbjct: 391 KDIVPDGIT 399
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 124/345 (35%), Gaps = 35/345 (10%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N LI F + G + + + G + C + +Y I A + +A + MI
Sbjct: 260 FNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSSYALHLLNLMI 319
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISS-------- 311
E G P II FCK G + A + + + V +IS
Sbjct: 320 ENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDIS 379
Query: 312 ----LCQEDETVKLALD----------------------MLDDFSGEARKYAIKPFSSVI 345
L +E T + D +L D S + +
Sbjct: 380 QANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTV 439
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
LC A LL ++ +G PP FNS+I+AY AG A +M GL
Sbjct: 440 AGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLT 499
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
P T + L+ G ++EA L + ++ + + L+ GY ++ + A L
Sbjct: 500 PSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESL 559
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
NEMK GV P+ + I LC+ L A + DM KG
Sbjct: 560 WNEMKGRGVFPDAVAFAAFINGLCISGL-MTDAYDVFSDMLRKGF 603
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 121/315 (38%), Gaps = 42/315 (13%)
Query: 179 ALWDIVKEIGEKEKGV-LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYF 237
AL+D++ +KG +T L+ + ++G A ++N+ G + +
Sbjct: 524 ALYDMI------DKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAA 577
Query: 238 TIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKK 297
I L + A+ V M+ G +P++ +I FCK GK EA + ++
Sbjct: 578 FINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRG 637
Query: 298 MYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGA 357
+ P V +I LC++ +KLA++ D I ++++I C+ DV GA
Sbjct: 638 LLPDIFTVNMIICGLCKQGR-MKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGA 696
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG---- 413
L+ KM G P +N I Y + A+ +L+ + S G+ P+ TY
Sbjct: 697 DDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMINA 756
Query: 414 ------------------------------LMSGYANGGQMEEACEILNEAKKNHSRLSP 443
L+S + G E+A + + H
Sbjct: 757 VCNVILDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKAIFWGQKLSEIHLDFDE 816
Query: 444 VTYHTLIRGYCKLEE 458
T+ + R Y LEE
Sbjct: 817 TTHKLMNRAYRALEE 831
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 115/274 (41%), Gaps = 6/274 (2%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
++A + ++ A + KM E G P+ + + + G ++ K
Sbjct: 194 MQAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGP 253
Query: 299 YPPQSVVAFLISSLCQEDETV--KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHG 356
P LI C++ T + L ++ F E Y+ ++ VI + C
Sbjct: 254 CPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYS---YNIVINANCLKGQSSY 310
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A LL+ MI G P A F ++I A+ K G++ A + + GL + Y ++S
Sbjct: 311 ALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMIS 370
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
GY + +A + E + +T++TL+ G+ + + + +LL ++ G+
Sbjct: 371 GYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLH 430
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+ + + LC A + A KLLE++ KG+
Sbjct: 431 DSSLCDVTVAGLCW-AGRYDEAMKLLENLLEKGI 463
>gi|218191264|gb|EEC73691.1| hypothetical protein OsI_08267 [Oryza sativa Indica Group]
Length = 751
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 150/361 (41%), Gaps = 60/361 (16%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCV------------------ANQE----TY 235
I++ L+ F KLG F KF D G AN E TY
Sbjct: 344 HIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKGEMQNAQQVFEEMLKANIEPDIVTY 403
Query: 236 YFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE 295
+ + + + ++M + G P+S G I FC+GG EA V++ + E
Sbjct: 404 NILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEE 463
Query: 296 KK------MYPPQSVVAFLISSLCQEDETVKLAL----DMLDDFSGEARKYAIKPFSSVI 345
K MY V +L+S + + + +++D FS S +I
Sbjct: 464 KGIDHIEVMYSSM-VCGYLLSGWTDHAYMLFVRVARQGNLVDHFSC----------SKLI 512
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
LCR+ +V GA + M+ P ++ +IS Y + GDM A M RGL
Sbjct: 513 NDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLS 572
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK---------- 455
DV YT LM+GY G+++EAC++ + + + Y L+ G+ K
Sbjct: 573 IDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGI 632
Query: 456 LEEFDCAL------KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
+E L KLL+ MKD+ ++P+V Y LI C KA A +L ++M KG
Sbjct: 633 AKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKC-KAEYLVEARELFDEMLQKG 691
Query: 510 L 510
L
Sbjct: 692 L 692
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 151/396 (38%), Gaps = 73/396 (18%)
Query: 142 PLVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILN 201
PLV C S +VD L+KA + + L+ + +G V +V N
Sbjct: 117 PLVDHHRRTCATPCSLSFMVDCLIKACITCYDVQATICLFSGICRLGV----VPSVWTWN 172
Query: 202 ELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET 261
L+ ++ G+ + +N+ + + T+ +L + K D A V +M E
Sbjct: 173 LLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEM 232
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYT-LAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD+ + C K A+V+ + REK P +A+
Sbjct: 233 GVKPDARGYSSFLIGLCDCRKYDLAYVILQEINREK---VPVEAMAY------------- 276
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
+ V+ LC+ + A+ LL +G P ++ +I
Sbjct: 277 ---------------------NMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLI 315
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY---------------------- 418
+Y K G++ A++ + M S G++ + + + L+ +
Sbjct: 316 QSYCKMGNLIKAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLH 375
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK----LEEFDCALKLLNEMKDVGV 474
+ G+M+ A ++ E K + VTY+ L G+CK +E FD LL+ M D G+
Sbjct: 376 LDKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFD----LLDRMADQGL 431
Query: 475 QPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+PN Y I C + + AE L + KG+
Sbjct: 432 EPNSLTYGIAIVGFC-RGGNLSEAEVLFNVVEEKGI 466
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 132/326 (40%), Gaps = 34/326 (10%)
Query: 167 AICSSVGKKEVYALWDIVKEIGEKEKGVLTVEIL-NELIALFSKLGKGKAAFEVFNKFGD 225
C E L+++V+E KG+ +E++ + ++ + G A+ +F +
Sbjct: 444 GFCRGGNLSEAEVLFNVVEE-----KGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVAR 498
Query: 226 YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKE 285
G + + + I L R A +VC+ M+E +PD K+IS +C+ G +
Sbjct: 499 QGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDK 558
Query: 286 AHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFS 342
AH+ + ++ + V L++ C+ E +L + M + IKP
Sbjct: 559 AHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTN--------LGIKP-- 608
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPG-NAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
DV LL + E G + S +A ++L M+
Sbjct: 609 ----------DVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHN----KLLSSMKD 654
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
++PDV YT L+ G + EA E+ +E + Y LI GYC E
Sbjct: 655 MQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISK 714
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQS 487
A LL EM D G++P+ ++ L QS
Sbjct: 715 AEDLLQEMIDKGIEPDELTFSVLNQS 740
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 121/331 (36%), Gaps = 70/331 (21%)
Query: 235 YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR 294
Y ++ L + D A + E GS PD +I +CK G +A Y
Sbjct: 276 YNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEAMV 335
Query: 295 EKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD- 353
+ +V++L+ RK + S VI + KD
Sbjct: 336 SHGIETNCHIVSYLLQCF---------------------RKLGMT--SEVIAYFLKFKDS 372
Query: 354 --------VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
+ A+ + +M+ P +N + S + K+G + ++L M +GL+
Sbjct: 373 GLHLDKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLE 432
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC----------- 454
P+ TY + G+ GG + EA + N ++ V Y +++ GY
Sbjct: 433 PNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYML 492
Query: 455 ---------KLEEFDCALKLLNEMKDVG----------------VQPNVDEYNKLIQSLC 489
++ F C+ KL+N++ VG V P+V Y+KLI C
Sbjct: 493 FVRVARQGNLVDHFSCS-KLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYC 551
Query: 490 LKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
D A DM +GL ++ I ++
Sbjct: 552 QNG-DMDKAHLWFHDMVQRGLSIDVIVYTIL 581
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 76/178 (42%), Gaps = 5/178 (2%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+ F+ V RSL + K V A + ++M G P ++S + A +L+
Sbjct: 203 VYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCRKYDLAYVILQ 262
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
+ + + Y +M G +++EA ++L + S Y LI+ YCK+
Sbjct: 263 EINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMG 322
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLK--GLHLN 513
A+ M G++ N + L+Q C + L T+E + ++ K GLHL+
Sbjct: 323 NLIKAVDHYEAMVSHGIETNCHIVSYLLQ--CFRKLGM-TSEVIAYFLKFKDSGLHLD 377
>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial [Vitis vinifera]
Length = 817
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 190/424 (44%), Gaps = 49/424 (11%)
Query: 130 LHEDFVLKVLETPLVLGENLV-CFFKW-VTSGVVDALLKAICSSVGKKEVYALWDIVKE- 186
LH D V ++T V+ +++ C + + S VVD + S + EV L++IV +
Sbjct: 354 LHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEV--LYNIVVDA 411
Query: 187 ---IGEKEKGVLTVEILNE---------------LIALFSKLGKGKAAFEVFNKFGDYGC 228
+G+ E+ V E+LNE LIA + GK A +F + + G
Sbjct: 412 LCKLGKVEEAV---ELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGI 468
Query: 229 VANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHV 288
+ TY + SR + A + + + G P+S +II C GK KEA
Sbjct: 469 EPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEA 528
Query: 289 VYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSL 348
+K + ++V C+ + T K A ++ S + K ++ SL
Sbjct: 529 FLNTLEDKCLENYSAMV----DGYCKANFTRK-AYELFSRLSKQGILVKKKSCFKLLSSL 583
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
C + A LL +M++ P ++ +I A+ + GDM A + ++ RG+ PDV
Sbjct: 584 CMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDV 643
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL------------ 456
TYT +++GY + EA +I N+ K+ + +TY ++ G+ K+
Sbjct: 644 ITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSK 703
Query: 457 ----EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
E+ D A +EMK++G++P+V Y LI S C K + + A L ++M +GL
Sbjct: 704 GSEEEKMD-ASPFWSEMKEMGIKPDVVCYTVLIDSHC-KTNNLQDAINLYDEMIARGLQP 761
Query: 513 NGIT 516
+ +T
Sbjct: 762 DIVT 765
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 159/358 (44%), Gaps = 31/358 (8%)
Query: 190 KEKGV-LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
KE+G+ + N L+ FS+ G K A E+ + G G N T+ IE L
Sbjct: 464 KERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLC----- 518
Query: 249 DWAWSVCEKMIETGSLPDS--EKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVA 306
A V E +L D E ++ +CK ++A+ +++ ++ + +
Sbjct: 519 -MAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCF 577
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
L+SSLC E E K AL +L+ + + +I + CR D+ A+ + ++
Sbjct: 578 KLLSSLCMEGEYDK-ALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVE 636
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG--------- 417
G P + +I+ Y + + A ++ M+ RG+KPDV TYT ++ G
Sbjct: 637 RGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMA 696
Query: 418 ----YANGGQME--EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
++ G + E +A +E K+ + V Y LI +CK A+ L +EM
Sbjct: 697 RSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIA 756
Query: 472 VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH-----LNGITRALIRAVK 524
G+QP++ Y L+ S C + D A L+ +M KG+ ++ + R +++A K
Sbjct: 757 RGLQPDIVTYTALLSSCCSRG-DMDRAITLVNEMSFKGIEPDSRAMSVLHRGILKARK 813
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 163/376 (43%), Gaps = 14/376 (3%)
Query: 154 KWVTSGVVDALLKAICSSVGKKE------VYALWDIVKEIGEKE---KGVLTVEILNELI 204
+W + +LL I VG KE + AL+D+++E G + + + +L+ L+
Sbjct: 108 RWRLERKLQSLLSEI---VGSKESVLGFDITALFDVLREGGGEVEGEHSSVLILVLDMLV 164
Query: 205 ALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL 264
+ ++G A + + G V + + F + L D A ++ + G
Sbjct: 165 KAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLN 224
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALD 324
P+ G I C+ G +EA V+ E + P + I LC + L +
Sbjct: 225 PNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRS-DLGYE 283
Query: 325 MLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
L +++VIR C + A+ + M++EG P ++ ++I AY
Sbjct: 284 ALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYC 343
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV 444
KAG++ A+ + M S G+K + + ++ G E + E + + L V
Sbjct: 344 KAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEV 403
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLED 504
Y+ ++ CKL + + A++LLNEMK + +V Y LI CL+ A+ + E+
Sbjct: 404 LYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQG-KLVDAKNMFEE 462
Query: 505 MRLKGLHLNGITRALI 520
M+ +G+ + +T ++
Sbjct: 463 MKERGIEPDIVTYNIL 478
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 74/177 (41%), Gaps = 11/177 (6%)
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P N +++ + G + A+ + + ++ GL P+ YTY + G EEA
Sbjct: 187 GFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEA 246
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
++ E ++ + VT T I G C + D + L ++ + Y +I+
Sbjct: 247 VDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRG 306
Query: 488 LCLKALDWRTAEKLLEDMRLKGLHLNG-ITRALIRAVKE---------LEEDAIENG 534
C + + AE + DM +G+ +G I ALI A + L D + NG
Sbjct: 307 FC-SEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNG 362
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 153/353 (43%), Gaps = 48/353 (13%)
Query: 176 EVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETY 235
E+ A++D ++ G V + N L+A+F + G VF + G + ++TY
Sbjct: 401 EMMAVFDELRSAG----FVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTY 456
Query: 236 YFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE 295
I + SR +FD A + ++M+E G PD ++S +GG+ ++A ++ E
Sbjct: 457 VSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEE 516
Query: 296 KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLC------ 349
+ P + + SSL K LD + S + I+P + ++++L
Sbjct: 517 RDCKPDE----YSYSSLLHAYANAK-RLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKV 571
Query: 350 --------------------------RMKDVHG-------AKTLLSKMISEGPPPGNAVF 376
M ++G + +LS M A +
Sbjct: 572 NNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATY 631
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
NS++ YS+ GD +L ++S G++PD Y+Y ++ Y GQM+EA + +E K
Sbjct: 632 NSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKC 691
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + VTY+ ++ Y F+ A++L+ M G +PN YN +++ C
Sbjct: 692 SGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYC 744
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 124/294 (42%), Gaps = 39/294 (13%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSV--CEKMIE 260
L++ FS+ G+ + A VF + D G TY + S+ + W V M E
Sbjct: 178 LVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAV-PWKEVVELVASMKE 236
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD +IS + KEA V+ + P K
Sbjct: 237 HGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPD------------------K 278
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
+ + L D G+AR++ A ++ +M G PP +NS+I
Sbjct: 279 VTFNSLLDVYGKARRH------------------DEAIEVIQEMERVGCPPSVVTYNSLI 320
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
S+Y K G + A+ + + M +G+KPDV TYT L+SG G+++ A +E +N +
Sbjct: 321 SSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCK 380
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
+ TY+ LI+ + +F + + +E++ G P++ +N L+ LD
Sbjct: 381 PNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLD 434
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 129/280 (46%), Gaps = 4/280 (1%)
Query: 179 ALWDIVKEIGEK--EKGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETY 235
L+D+ +I ++ E G+ V N +++ ++ G+ + A ++F + + C ++ +Y
Sbjct: 467 GLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSY 526
Query: 236 YFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE 295
+ A + K D ++ + + P + V ++ K EA + R+
Sbjct: 527 SSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQ 586
Query: 296 KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVH 355
K+ +V+ ++S + ++ V+ +L A + ++S++ R+ D
Sbjct: 587 KRCSLDINVLNAMVS-IYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCE 645
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
+ +L+++ S G P +N+VI AY + G M A + M+ GLKPDV TY +
Sbjct: 646 KCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFV 705
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
Y + EEA E++ + + TY++++ GYC+
Sbjct: 706 KSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCR 745
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 149/352 (42%), Gaps = 32/352 (9%)
Query: 175 KEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQET 234
KE ++D +K G + V N L+ ++ K + A EV + GC + T
Sbjct: 260 KEAAQVFDEMKASGFEPDKV----TFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVT 315
Query: 235 YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR 294
Y I + + + + A ++ ++M G PD +IS + GK A V Y
Sbjct: 316 YNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMV 375
Query: 295 EKKMYPPQSVVAFLISSLCQEDETVKLA------LDMLDDFSGEARKYAIKPFSSVIRSL 348
P +LC + +K+ +M+ F E R P +L
Sbjct: 376 RNGCKP----------NLCTYNALIKMHGVRGKFPEMMAVFD-ELRSAGFVPDIVTWNTL 424
Query: 349 CRMKDVHGAKTLLSKMISE----GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
+ +G + +S + E G P + S+IS+YS+ G AM++ K M G+
Sbjct: 425 LAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGI 484
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
PDV TY ++S A GG+ E+A ++ E ++ + +Y +L+ Y + D
Sbjct: 485 YPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKA 544
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLCL---KALDWRTAEKLLEDMRLKGLHLN 513
L +++ ++P +N L+++L L K + AEK ++R K L+
Sbjct: 545 LSDDIYSERIEP----HNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLD 592
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 97/225 (43%), Gaps = 41/225 (18%)
Query: 328 DFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG 387
+ GE + + ++ IR + R + A LL P P + +++SA+S+AG
Sbjct: 131 ELHGEGVLHHPRVLATAIRVMARAGRLAEASALLDA----APGPDAGAYTALVSAFSRAG 186
Query: 388 ---------------DMTPAM---------------------EMLKLMRSRGLKPDVYTY 411
+ PA+ E++ M+ G+ PD YTY
Sbjct: 187 RFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTY 246
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
L+S +EA ++ +E K + VT+++L+ Y K D A++++ EM+
Sbjct: 247 NTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMER 306
Query: 472 VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
VG P+V YN LI S L A L ++M +KG+ + +T
Sbjct: 307 VGCPPSVVTYNSLISSYVKDGL-LEQAVALKQEMEVKGIKPDVVT 350
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 66/165 (40%), Gaps = 4/165 (2%)
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
R+L + D G T ++S P P A + + + G A+ + + G+
Sbjct: 79 RALLALLDDPGRATSPRDLLSGLPAPELAAVVGALGSRGQPGAALAALHAARELHGEGVL 138
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
+ A G++ EA +L+ A + Y L+ + + F A+ +
Sbjct: 139 HHPRVLATAIRVMARAGRLAEASALLDAAPGPDAG----AYTALVSAFSRAGRFRDAVAV 194
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
M D GVQP + YN ++ A+ W+ +L+ M+ G+
Sbjct: 195 FRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGV 239
>gi|116310235|emb|CAH67244.1| OSIGBa0140O07.12 [Oryza sativa Indica Group]
Length = 581
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 151/312 (48%), Gaps = 7/312 (2%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFG-DYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
++I + + G+ A ++F++ YG + F + + + + D + ++ K
Sbjct: 146 QQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKAS 205
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDE 317
E G ++ K++S G+ + ++ + ++Y P V +F +I +C+ +
Sbjct: 206 EFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRLYSPD-VWSFNVVIKGVCRVGQ 264
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV-F 376
V+ AL++++ + + ++ LCR +V +L ++ +G N V F
Sbjct: 265 -VQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTF 323
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
SVIS Y KAG + AM + M + G+ P+ TY L++GY G + A E+ + +
Sbjct: 324 TSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTR 383
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
VT+ +LI GYC+ + D AL++ ++M +QPNV ++ +I SLC K
Sbjct: 384 LRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLC-KQNRSD 442
Query: 497 TAEKLLEDMRLK 508
A +LL ++ L+
Sbjct: 443 EAIRLLNELNLR 454
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 123/298 (41%), Gaps = 10/298 (3%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N +I ++G+ + A E+ + ++GC + T+ ++ L R V ++
Sbjct: 252 FNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQ 311
Query: 260 ETG-SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
G +P+ +IS +CK GK ++A VY + P LI+ + +
Sbjct: 312 RDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGD- 370
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+ A+++ + + FSS+I CR + A + S M P F+
Sbjct: 371 LGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSI 430
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDV----YTYTGLMSGYANGGQMEEACEILNEA 434
+I + K + E ++L+ L+PD+ + Y ++ G+++EA I
Sbjct: 431 IIHSLCKQNR---SDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGM 487
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
++ R TY LI GYC A+ +EM + G P+ N I L LKA
Sbjct: 488 EEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCL-LKA 544
>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 178/426 (41%), Gaps = 44/426 (10%)
Query: 154 KWVTSGVVDALLKAICSSVGKKE------VYALWDIVKEIGEKE---KGVLTVEILNELI 204
+W + +LL I VG KE + AL+D+++E G + + + +L+ L+
Sbjct: 108 RWRLERKLQSLLSEI---VGSKESVLGFDITALFDVLREGGGEVEGEHSSVLILVLDMLV 164
Query: 205 ALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL 264
+ ++G A + + G V + + F + L D A ++ + G
Sbjct: 165 KAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLN 224
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALD 324
P+ G I C+ G +EA V+ E + P + I LC + L +
Sbjct: 225 PNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRS-DLGYE 283
Query: 325 MLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
L +++VIR C + A+ + M++EG P ++ ++I AY
Sbjct: 284 ALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYC 343
Query: 385 KAGDMTPAMEMLKLMRSRGLKP----------------DVYTYTGLMSGYANGGQMEEAC 428
KAG++ A+ + M S G+K D Y ++ G++EEA
Sbjct: 344 KAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAV 403
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
E+LNE K L V Y TLI GYC + A + EMK+ G++P++ YN L+
Sbjct: 404 ELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGF 463
Query: 489 CLKALDWRTAEKLLEDMRLKGLHLNGITRALI-------RAVKE-------LEEDAIENG 534
L + A +LL+ + +GL N T I VKE LE+ +EN
Sbjct: 464 SRNGLK-KEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLENY 522
Query: 535 EALVEA 540
A+V+
Sbjct: 523 SAMVDG 528
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 137/309 (44%), Gaps = 14/309 (4%)
Query: 190 KEKGVLTVEIL-NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
++ G+ E+L N ++ KLGK + A E+ N+ + Y I +
Sbjct: 375 RDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKL 434
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
A ++ E+M E G PD ++ F + G KEA + + + P + +
Sbjct: 435 VDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRI 494
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
I LC + VK A L+ + ++ +S+++ C+ A L S++ +G
Sbjct: 495 IEGLCMAGK-VKEAEAFLNTLEDKC----LENYSAMVDGYCKANFTRKAYELFSRLSKQG 549
Query: 369 --------PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
P ++ +I A+ + GDM A + ++ RG+ PDV TYT +++GY
Sbjct: 550 ILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCR 609
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
+ EA +I N+ K+ + +TY ++ G+ K A+ L +EM G+QP++
Sbjct: 610 VNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVT 669
Query: 481 YNKLIQSLC 489
Y L+ C
Sbjct: 670 YTALLPGKC 678
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 113/263 (42%), Gaps = 30/263 (11%)
Query: 190 KEKGV-LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
KE+G+ + N L+ FS+ G K A E+ + G G N T+ IE L
Sbjct: 445 KERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLC----- 499
Query: 249 DWAWSVCEKMIETGSLPDS--EKVGKIISWFCKGGKAKEAHVVYTLAREKKMY------- 299
A V E +L D E ++ +CK ++A+ +++ ++ +
Sbjct: 500 -MAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALDV 558
Query: 300 -PPQSVVAFLISSLCQEDET--VKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMK 352
P Q + LI + C++ + +L DML + I P ++ +I CR+
Sbjct: 559 EPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVE-------RGITPDVITYTMMINGYCRVN 611
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT 412
+ A+ + + M G P + V+ +SK ++ A+ + M +RGL+PD+ TYT
Sbjct: 612 CLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYT 671
Query: 413 GLMSGYANGGQMEEACEILNEAK 435
L+ G N G + L E K
Sbjct: 672 ALLPGKCNFGSRHFDNQWLEEPK 694
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 75/181 (41%), Gaps = 26/181 (14%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN--------------------- 373
++ + ++++IR LCR + ++LLS+++
Sbjct: 93 QHNVDTYAALIRVLCRWRLERKLQSLLSEIVGSKESVLGFDITALFDVLREGGGEVEGEH 152
Query: 374 -----AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
V + ++ AY + G A++ L + RG P + + LM+ G+++ A
Sbjct: 153 SSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAV 212
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
I K+ + TY I+ C+ F+ A+ + EM++ GV PN + I+ L
Sbjct: 213 AIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGL 272
Query: 489 C 489
C
Sbjct: 273 C 273
>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 827
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 142/326 (43%), Gaps = 5/326 (1%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
L+ A C GK +V D+++E+ E + ++ LI K + A ++F+
Sbjct: 432 LINAFC---GKGDVMKCLDLMEEM-EHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSI 487
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
G C + Y I+ + D A + E+MI +P + +I + K G
Sbjct: 488 GASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLF 547
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
+A V+ ++P +++ C+ K AL +L+DF +++
Sbjct: 548 DQALEVFNAMLRDGIWPDTIACNYILDGSCRAG-YFKEALTLLEDFQEHGFNLNPHSYNA 606
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
+I LC+ A LL +M+ P ++++IS ++K + A+ + M G
Sbjct: 607 IIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVG 666
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
+ ++ TYT LMS +++ +M EA I E K+ L ++Y TLI G+C E A
Sbjct: 667 ITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAW 726
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLC 489
L EM G PNV Y +I C
Sbjct: 727 ALFEEMSREGCSPNVITYTCIIDGFC 752
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 158/367 (43%), Gaps = 16/367 (4%)
Query: 164 LLKAICSSVG----KKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
++ CS VG ++ + + GEK TV + I K+G +AA +
Sbjct: 323 MMNFYCSDVGCDAGMRQAAVILGKIYRSGEKP----TVVTYSTYIHGLCKVGNVEAALML 378
Query: 220 FNKFGDYGCVANQETYYFTIEALSRR-KIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
N ++ I +R ++F+ A V E+M +G LPD +I+ FC
Sbjct: 379 IRNLHYTNQPLNSHSFNDVIYGFCKRGEVFE-ALQVLEEMKSSGILPDVYSYSILINAFC 437
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKY 336
G + + ++ P S+V++ LI LC+++ ++ A+D+ + KY
Sbjct: 438 GKGDVMKCLDLMEEMEHSQIKP--SIVSYTSLIHGLCKKN-MLQNAVDIFHSIGASSCKY 494
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ ++I C D+ A LL +MI P S+I Y K G A+E+
Sbjct: 495 DSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVF 554
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
M G+ PD ++ G G +EA +L + +++ L+P +Y+ +I CK
Sbjct: 555 NAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKE 614
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ AL+LL M V P+V Y+ LI K +++ A L M G+ N T
Sbjct: 615 GYPERALELLPRMLKRNVLPSVVNYSTLISGFA-KQSNFKRAVNLFTRMVKVGITFNIAT 673
Query: 517 RALIRAV 523
++ ++
Sbjct: 674 YTILMSI 680
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 140/317 (44%), Gaps = 7/317 (2%)
Query: 216 AFEVFNKFGDYGCVANQETYYF--TIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
FE+F+ F D + F I + + + A V G PD +
Sbjct: 229 TFELFSAFLDSPQHVERSGVVFDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFL 288
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFS 330
+ + + + V+ +++ P +++ C + D ++ A +L
Sbjct: 289 LKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIY 348
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
K + +S+ I LC++ +V A L+ + P + FN VI + K G++
Sbjct: 349 RSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVF 408
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A+++L+ M+S G+ PDVY+Y+ L++ + G + + +++ E + + + S V+Y +LI
Sbjct: 409 EALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLI 468
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
G CK A+ + + + + + Y LI C++ D +A KLLE+M L
Sbjct: 469 HGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQG-DMDSAIKLLEEMICNEL 527
Query: 511 HLNGIT-RALIRAVKEL 526
+ R+LIR +L
Sbjct: 528 VPTAFSCRSLIRGYYKL 544
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 128/290 (44%), Gaps = 18/290 (6%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
I + +FD A V M+ G PD+ I+ C+ G KEA + +E
Sbjct: 538 IRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGF 597
Query: 299 -YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGA 357
P S A +I LC+E + AL++L ++ +S++I + + A
Sbjct: 598 NLNPHSYNA-IIYKLCKEGYPER-ALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRA 655
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
L ++M+ G A + ++S +S + M A + K M+ RGL D +YT L+ G
Sbjct: 656 VNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVG 715
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
+ N +M++A + E + + +TY +I G+CK D A + ++M V P+
Sbjct: 716 FCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPD 775
Query: 478 VDEYNKLIQSLCLKALDWR-------TAEKLLEDMRLKGLHLNGITRALI 520
V Y LI DW A KL + M+ KG+ + IT ++
Sbjct: 776 VVTYTVLI--------DWYHKHGYFDQAHKLYDVMKDKGVLPDDITHNVL 817
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 3/121 (2%)
Query: 181 WDIVKEIGEKEKGVLTVEI-LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI 239
+ I KE+ KE+G+ +I LI F + K A+ +F + GC N TY I
Sbjct: 691 YGIFKEM--KERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCII 748
Query: 240 EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
+ + D A V +KM +PD +I W+ K G +AH +Y + ++K +
Sbjct: 749 DGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVL 808
Query: 300 P 300
P
Sbjct: 809 P 809
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 154/347 (44%), Gaps = 8/347 (2%)
Query: 164 LLKAICSSVG-KKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L+A C G + V L D+ L V N ++ G A +
Sbjct: 200 ILEAACRGGGFRSAVRVLEDL-----HARGCALDVGNCNLVLNAICDQGSVDEALHLLRD 254
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+GC + +Y ++ L K + + E+M+ P+ +IS+ C+ G
Sbjct: 255 LPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGL 314
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+ H V E P + A +I +C+E +++A ++L+ K + ++
Sbjct: 315 FERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGH-LEVAHEILNRMPSYGLKPNVVCYN 373
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
++++ LC + + LL++M + P + FN ++ + + G + +E+L+ M
Sbjct: 374 TLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEH 433
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G PDV TYT +++G+ G ++EA +L + + ++Y +++G C E + A
Sbjct: 434 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDA 493
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
L+++M G N +N LI LC K L + E LL+ M + G
Sbjct: 494 EDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIE-LLKQMLVNG 539
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 131/292 (44%), Gaps = 2/292 (0%)
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
E+ + D C + T+ ++ + + D + E+M+E G +PD +I+ F
Sbjct: 390 ELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGF 449
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
CK G EA ++ P ++ LC + V A D++ +
Sbjct: 450 CKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVD-AEDLMSQMIQQGCPLN 508
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
F+++I LC+ V A LL +M+ G P +++VI KAG A+E+L
Sbjct: 509 PITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLN 568
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
+M ++G+ P+ Y+ + S + G++ + ++ + + R V Y+ +I CK
Sbjct: 569 VMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRG 628
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
E + A++ L M G PN Y LI+ L + + A+++L ++ KG
Sbjct: 629 ETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGF-VKEAQEMLTELCSKG 679
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 144/362 (39%), Gaps = 44/362 (12%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ A V ++ GC Y+ +EA R F A V E + G D
Sbjct: 173 GRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNC 232
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDD 328
+++ C G EA ++ L VV++ ++ LC +++++
Sbjct: 233 NLVLNAICDQGSVDEA--LHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRW-GCVQELMEE 289
Query: 329 FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD 388
A I F+++I LCR +L++M+ G P ++ ++I K G
Sbjct: 290 MVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGH 349
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSG------------------------------- 417
+ A E+L M S GLKP+V Y L+ G
Sbjct: 350 LEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNI 409
Query: 418 ----YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
+ G ++ E+L + ++ +TY T+I G+CK D A+ LL M G
Sbjct: 410 LVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACG 469
Query: 474 VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAV--KELEEDA 530
+PN Y +++ LC A W AE L+ M +G LN IT LI + K L E A
Sbjct: 470 CKPNTISYTIVLKGLC-SAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQA 528
Query: 531 IE 532
IE
Sbjct: 529 IE 530
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 132/308 (42%), Gaps = 7/308 (2%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+ + +I K G + A E+ N+ YG N Y ++ L + ++ +
Sbjct: 334 IRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLA 393
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE- 315
+M + D ++ +FC+ G + E P +I+ C+E
Sbjct: 394 EMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEG 453
Query: 316 --DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
DE V L L + K ++ V++ LC + A+ L+S+MI +G P
Sbjct: 454 LIDEAVML----LKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNP 509
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
FN++I+ K G + A+E+LK M G PD+ +Y+ ++ G G+ +EA E+LN
Sbjct: 510 ITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNV 569
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
+ + Y ++ + + +++ + ++D ++ + YN +I SLC +
Sbjct: 570 MVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGE 629
Query: 494 DWRTAEKL 501
R E L
Sbjct: 630 TERAIEFL 637
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 87/185 (47%), Gaps = 8/185 (4%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+ V+R+LC + A +L +M G P +++ ++ A + G A+ +L+ +
Sbjct: 162 YFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLH 221
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+RG DV +++ + G ++EA +L + V+Y+ +++G C + +
Sbjct: 222 ARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWG 281
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE--------DMRLKGLHL 512
C +L+ EM + PN+ +N LI LC L R E L + D+R+ +
Sbjct: 282 CVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATII 341
Query: 513 NGITR 517
+GI +
Sbjct: 342 DGICK 346
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 6/166 (3%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA-VFNSVISAYSKAGDMTPAMEMLKLM 399
+++++ CR + A+ L + + P P NA + V+ A G + A+ +L M
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAV----PVPPNAYTYFPVVRALCARGRIADALAVLDEM 185
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
RG P Y ++ GG A +L + L + ++ C
Sbjct: 186 PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSV 245
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
D AL LL ++ G +P+V YN +++ LC+ A W ++L+E+M
Sbjct: 246 DEALHLLRDLPSFGCEPDVVSYNAVLKGLCM-AKRWGCVQELMEEM 290
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 111/258 (43%), Gaps = 4/258 (1%)
Query: 179 ALWDIVKEIGEK--EKGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETY 235
L D V E+ E+ E G + V +I F K G A + GC N +Y
Sbjct: 418 GLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISY 477
Query: 236 YFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE 295
++ L + + A + +MI+ G + +I++ CK G ++A +
Sbjct: 478 TIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLV 537
Query: 296 KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVH 355
P + +I L + +T + AL++L+ + +SS+ +L R ++
Sbjct: 538 NGCSPDLISYSTVIDGLGKAGKTDE-ALELLNVMVNKGMSPNTIIYSSIASALSREGRIN 596
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
+ + ++N+VIS+ K G+ A+E L M S G P+ TYT L+
Sbjct: 597 KVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILI 656
Query: 416 SGYANGGQMEEACEILNE 433
G A+ G ++EA E+L E
Sbjct: 657 RGLASEGFVKEAQEMLTE 674
Score = 38.9 bits (89), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 71/169 (42%), Gaps = 1/169 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N LI K G + A E+ + GC + +Y I+ L + D A + M+
Sbjct: 512 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMV 571
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
G P++ I S + G+ + ++ ++ + + +ISSLC+ ET
Sbjct: 572 NKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETE 631
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
+ A++ L ++ +IR L V A+ +L+++ S+G
Sbjct: 632 R-AIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 679
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 159/331 (48%), Gaps = 13/331 (3%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGE-KEKGV-LTVEILNELIALFSKLGKGKAAF 217
+VDA K CSS D ++ + E ++KGV T+ N ++ K GK + A
Sbjct: 355 LVDACFKWRCSS----------DALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEAL 404
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
K + G + TY I+A + A+++ ++M+ G D+ + ++
Sbjct: 405 GKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNL 464
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
CK + ++A + ++ P + ++++ +E + AL + D +
Sbjct: 465 CKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKE-YNPEPALRLWDQMIERKLIPS 523
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
I ++++I+ LCRM+ + A L++++ +G P +N +I AY K GD+ A
Sbjct: 524 ISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHN 583
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M KPDV T LM+G G++++A ++ + ++ +TY+TLI+ CK+
Sbjct: 584 KMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVG 643
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ D AL ++M+ G+QP+ YN ++ +L
Sbjct: 644 DVDTALHFFDDMEVKGLQPDAFTYNVVLSAL 674
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 182/462 (39%), Gaps = 59/462 (12%)
Query: 107 VLSLLQSSVDGYLESSLDSF----ELDLHED---FVLKV--------LETPLVLGENLVC 151
VLS L S ++SLD F EL LH + F L V L L +
Sbjct: 177 VLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQG 236
Query: 152 FFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLG 211
F + + LL A C E AL +K G T N L++ F++LG
Sbjct: 237 FGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAP----TQPTYNTLVSAFARLG 292
Query: 212 KGKAAFEVFNKFGDYGCVANQETYYFT-------------------IEALSRR------- 245
K A +V YG + TY +E LS
Sbjct: 293 WIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTY 352
Query: 246 -----KIFDW-----AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE 295
F W A + E+M + G P ++ CK GK +EA E
Sbjct: 353 NTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAE 412
Query: 296 KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVH 355
+ + P LI + C+ K A ++D+ G+ K ++V+ +LC+MK
Sbjct: 413 EGLAPDVITYNTLIDAYCKAGNVAK-AFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYE 471
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
A+ LL G P + +V++AY K + PA+ + M R L P + TY L+
Sbjct: 472 DAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLI 531
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
G +++EA + LNE + TY+ +I YCK + + A + N+M + +
Sbjct: 532 KGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFK 591
Query: 476 PNVDEYNKLIQSLCLKA-LDWRTAEKLLEDMRLKGLHLNGIT 516
P+V N L+ LCL LD A KL E KG ++ IT
Sbjct: 592 PDVVTCNTLMNGLCLHGKLD--KALKLFESWVEKGKKVDVIT 631
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 127/305 (41%), Gaps = 38/305 (12%)
Query: 191 EKGVLTVEI-LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
++G + E+ ++A + K + A ++++ + + + TY I+ L R +
Sbjct: 482 QRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLK 541
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A +++E G +PD II +CK G + A + E P L+
Sbjct: 542 EAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLM 601
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
+ LC + K AL + + + + +K + ++++I+S+C++ DV A M +G
Sbjct: 602 NGLCLHGKLDK-ALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGL 660
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG----------LKPD------------ 407
P +N V+SA S+AG A ML + G LKP
Sbjct: 661 QPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEG 720
Query: 408 --------------VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
+ TY ++G GGQ++EA +L+E + + TY TL+ G
Sbjct: 721 KPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGL 780
Query: 454 CKLEE 458
K ++
Sbjct: 781 IKRQK 785
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 121/276 (43%), Gaps = 13/276 (4%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ A C + + + L D + G K + LN ++ K+ + + A E+ +
Sbjct: 423 NTLIDAYCKAGNVAKAFTLMDEMVGKGLK----MDTFTLNTVLYNLCKMKRYEDAEELLH 478
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G V ++ +Y + A + + A + ++MIE +P +I C+
Sbjct: 479 SPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRME 538
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP- 340
+ KEA EK + P ++ +I + C+E + L+ F + + + KP
Sbjct: 539 RLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGD-----LENAFRFHNKMVENSFKPD 593
Query: 341 ---FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
++++ LC + A L + +G +N++I + K GD+ A+
Sbjct: 594 VVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFD 653
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
M +GL+PD +TY ++S + G+ EEA +L++
Sbjct: 654 DMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHK 689
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 6/172 (3%)
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISE-GPPPGNAVFNSVISAYSKAGDMTP--AMEMLKLM 399
+ + + R++ H A LL + G P N+V+SA S++ P ++++ + +
Sbjct: 140 AALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSL 199
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
L P+ YT+ L+ + + G + +A L+ + VTY+TL+ +C+
Sbjct: 200 IELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGML 259
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW-RTAEKLLEDMRLKGL 510
A LL MK G+ P YN L+ + L W + A K++E M G
Sbjct: 260 GEARALLARMKRDGIAPTQPTYNTLVSAFA--RLGWIKQATKVVESMTAYGF 309
>gi|302754000|ref|XP_002960424.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
gi|300171363|gb|EFJ37963.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
Length = 321
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 131/295 (44%), Gaps = 2/295 (0%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
GC+ T+ ++ L + A+ + E M E G P++ I+ CK G++ EA
Sbjct: 5 GCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGRSAEA 64
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
+ R + P LI C+E E + AL++L + +G + +++ +
Sbjct: 65 YGYIETMRSMGVSPTIVTYNILIDGFCKE-EKLHRALEILQEMTGRGHEPNHVTYNTFLH 123
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
LC+ V A L M + + ++I +AG + A +L M + G P
Sbjct: 124 GLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVP 183
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
Y ++S G ++ EA ++ + +T+ ++ GYC+ D AL LL
Sbjct: 184 KPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLL 243
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIR 521
+MK G+ P YN LI +L +A A +LL++M +GL N T AL+R
Sbjct: 244 QQMKSAGLAPREVIYNTLIDALN-RAGRVSEAYRLLQEMISRGLSPNSRTYALMR 297
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 101/253 (39%), Gaps = 37/253 (14%)
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M E G +P G ++ CK + +A + + E+ +P V ++ +LC+E
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGR 60
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
S EA Y + M S G P +N
Sbjct: 61 ------------SAEAYGY------------------------IETMRSMGVSPTIVTYN 84
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+I + K + A+E+L+ M RG +P+ TY + G G++++A + +
Sbjct: 85 ILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDDALALFRAMTEK 144
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
RL Y TLI G C+ + A LL+EM++ G P YN ++ LC K
Sbjct: 145 KIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLC-KGSRINE 203
Query: 498 AEKLLEDMRLKGL 510
A KL + M G+
Sbjct: 204 AHKLFKRMTGSGI 216
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 58/153 (37%), Gaps = 36/153 (23%)
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
M +G P F ++ KA +T A E++++M RG P+ + G+M G+
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGR 60
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
EA GY + M+ +GV P + YN
Sbjct: 61 SAEA-----------------------YGY------------IETMRSMGVSPTIVTYNI 85
Query: 484 LIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
LI C K A ++L++M +G N +T
Sbjct: 86 LIDGFC-KEEKLHRALEILQEMTGRGHEPNHVT 117
>gi|255660824|gb|ACU25581.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 418
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 138/280 (49%), Gaps = 4/280 (1%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEK--VGKIISWFCKGGKAKEAHVVYTLAREK 296
I+ + RK A +V ++ET S+ +I+ + + G ++A Y L +E
Sbjct: 36 IQIVVSRKGKGSASAVFAAILETKGTQRSDXYVFSGLITAYLESGFLRDAIECYRLTKEH 95
Query: 297 KMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHG 356
K P +I L + + KL ++ ++ F+ ++ C+ ++
Sbjct: 96 KFRVPFDTCRKVIEHL-MKLKYFKLVWGFYEESLECGYPASLYFFNILMHXFCKEGEIRL 154
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A+++ + G P FN++++ Y K GD+ + +M++ G+ PDVYTY+ L++
Sbjct: 155 AQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVHPDVYTYSVLIN 214
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
G +M++A E+ +E N + VT+ TLI G+CK D A+++ +M + P
Sbjct: 215 GLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLP 274
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++ YN LI LC K D + A L+++M +KGL + IT
Sbjct: 275 DLITYNTLIYGLCKKG-DLKQAHDLIDEMSMKGLKPDKIT 313
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 133/291 (45%), Gaps = 18/291 (6%)
Query: 235 YYFTI--EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTL 292
Y+F I + A SV + + + G P +++ + K G E + ++
Sbjct: 137 YFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSV 196
Query: 293 AREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKP----FSSVI 345
+ ++P + LI+ LC+E D+ +L +MLB+ + P F+++I
Sbjct: 197 MQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBN--------GLVPNXVTFTTLI 248
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
C+ V A + +M+S+ P +N++I K GD+ A +++ M +GLK
Sbjct: 249 DGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLK 308
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
PD TYT L+ G G +E A E K + R V Y LI G C+ A K+
Sbjct: 309 PDKITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKM 368
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
L EM VG++P + Y +I C K W T KLL++M+ G N +T
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEXCKKGDVW-TGSKLLKEMQRXGYVPNVVT 418
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 4/200 (2%)
Query: 301 PQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
P S+ F L+ C+E E ++LA + D + + ++ F++++ ++ D+
Sbjct: 133 PASLYFFNILMHXFCKEGE-IRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGF 191
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
L S M + G P ++ +I+ K M A E+ M GL P+ T+T L+ G+
Sbjct: 192 RLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGH 251
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G+++ A EI + +TY+TLI G CK + A L++EM G++P+
Sbjct: 252 CKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 311
Query: 479 DEYNKLIQSLCLKALDWRTA 498
Y LI C K D TA
Sbjct: 312 ITYTTLIDGXC-KEGDLETA 330
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 108/237 (45%), Gaps = 1/237 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N L+ + K+G F + + G + TY I L + D A + ++M+
Sbjct: 174 FNTLMNGYIKIGDLDEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEML 233
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G +P+ +I CK G+ A +Y + + P LI LC++ + +
Sbjct: 234 BNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGD-L 292
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
K A D++D+ S + K ++++I C+ D+ A +MI E + + ++
Sbjct: 293 KQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTAL 352
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
IS + G A +ML+ M S GLKP++ TYT +++ G + ++L E ++
Sbjct: 353 ISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEXCKKGDVWTGSKLLKEMQR 409
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 1/208 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K K A E+F++ B G V N T+ I+ + D A + +M+
Sbjct: 212 LINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYRQMLSQS 271
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
LPD +I CK G K+AH + K + P + LI C+E + ++ A
Sbjct: 272 LLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGD-LETA 330
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+ E + ++++I LC+ A+ +L +M+S G P + +I+
Sbjct: 331 FEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINE 390
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
K GD+ ++LK M+ G P+V T
Sbjct: 391 XCKKGDVWTGSKLLKEMQRXGYVPNVVT 418
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 76/177 (42%), Gaps = 20/177 (11%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS-EGPPPGNAVFNSVISAYSKAGDMTPAM 393
++ ++ + ++I LC + + AKTL+ ++S +G +AVF +++
Sbjct: 10 RHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQ------- 62
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
+ D Y ++GL++ Y G + +A E K++ R+ T +I
Sbjct: 63 -----------RSDXYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHL 111
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
KL+ F E + G ++ +N L+ C K + R A+ + + + GL
Sbjct: 112 MKLKYFKLVWGFYEESLECGYPASLYFFNILMHXFC-KEGEIRLAQSVFDSITKWGL 167
>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
Length = 348
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 124/256 (48%), Gaps = 4/256 (1%)
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
G P++ + +I C G+ +A + + + Q LI LC+ ET +
Sbjct: 2 GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGET-RA 60
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
ALD+L G+ + +++VI +C+ K V+ A L S+M+S+G P ++++IS
Sbjct: 61 ALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALIS 120
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
+ G + A+++ + +KPD YT+ L+ G+ +M+E + K
Sbjct: 121 GFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIP 180
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC-LKALDWRTAEK 500
VTY++L+ GY ++E + A + N M GV P++ YN LI C +K +D A
Sbjct: 181 DVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVD--KAMN 238
Query: 501 LLEDMRLKGLHLNGIT 516
L +M K + N +T
Sbjct: 239 LFNEMHCKNIIPNVVT 254
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 140/306 (45%), Gaps = 8/306 (2%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K+G+ +AA ++ + N Y I + + K + A+ + +M+ G
Sbjct: 48 LIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKG 107
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P+ +IS F GK K+A ++ + + P L+ C+ D +K
Sbjct: 108 ISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCK-DRKMKEG 166
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+ + + ++S++ +K+V+ AK++ + M G P +N +I+
Sbjct: 167 KTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILING 226
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ K + AM + M + + P+V TY L+ G + G++ A +++++ H R
Sbjct: 227 FCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQM---HDRGV 283
Query: 443 P---VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
P +TY+++I K + D A+ L+ + KD G+QP++ Y LI LC K + A
Sbjct: 284 PPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLC-KGGRLKDAR 342
Query: 500 KLLEDM 505
+ ED+
Sbjct: 343 NIFEDL 348
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 132/293 (45%), Gaps = 9/293 (3%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSR----RKIFDWAWSVC 255
LN LI G+ AF +K G +Q +Y I L + R D V
Sbjct: 10 LNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVD 69
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
K+++ ++ +I CK +A +Y+ K + P + LIS
Sbjct: 70 GKLVQLNAV----MYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVV 125
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ +K A+D+ + E K F+ ++ C+ + + KT+ + M+ +G P
Sbjct: 126 GK-LKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVT 184
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+NS++ Y ++ A + M G+ PD+ +Y L++G+ ++++A + NE
Sbjct: 185 YNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMH 244
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ + VTY++LI G K AL+L+++M D GV PN+ YN +I +L
Sbjct: 245 CKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDAL 297
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI SK G+ A ++ ++ D G N TY I+AL + D A ++ K +
Sbjct: 256 NSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKD 315
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
G P +I CKGG+ K+A ++
Sbjct: 316 QGIQPSMYTYTILIDGLCKGGRLKDARNIF 345
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 151/330 (45%), Gaps = 6/330 (1%)
Query: 162 DALLKAIC-SSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVF 220
+ ++K +C S ++ + L +VK+ G V+T N +I + G+ A +F
Sbjct: 194 NTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVT---YNTVIHGLFREGEVSKACNLF 250
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
++ G V + TY I+AL + + D A V +MI G P+ +I +
Sbjct: 251 HEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSIS 310
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
G+ KE ++ + + P +SSLC+ ++ K A + D + + K +
Sbjct: 311 GQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKS-KEAAEFFDSMAAKGHKPNLVT 369
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+S ++ L + M G VFN VI AY K G M M + M+
Sbjct: 370 YSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQ 429
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+G+ PD TY +++ ++ G++ +A + N+ + + YH+LI+G+C
Sbjct: 430 EQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLV 489
Query: 461 CALKLLNEMKDVGV-QPNVDEYNKLIQSLC 489
A +L++EM G+ +PN+ +N +I SLC
Sbjct: 490 KAKELVSEMMSRGIPRPNIVFFNSIINSLC 519
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 179/413 (43%), Gaps = 45/413 (10%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
++ + ++C KE +D + G K V +L+ ++ G +FN
Sbjct: 336 NSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHG----YATEGCFVDMLNLFN 391
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G VA+Q + I+A +R + D + +M E G +PD+ G +I+ F + G
Sbjct: 392 SMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMG 451
Query: 282 KAKEAH---------------VVY-----------TLAREKKMY--------PPQSVVAF 307
+ +A +VY L + K++ P ++V F
Sbjct: 452 RLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFF 511
Query: 308 --LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI 365
+I+SLC+E V+ A D+ D + + F+S+I + + A +L MI
Sbjct: 512 NSIINSLCKEGRVVE-AHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMI 570
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
S G P +N++I Y + G + + + M S+G+KP TY ++ G N G+
Sbjct: 571 SAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTV 630
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
A ++ +E ++ + + T ++ G C+ D A+ + ++ + V+ N+ N +I
Sbjct: 631 GAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMI 690
Query: 486 QSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRAVKE-LEEDAIENGEAL 537
++ K A++L + + GL N T ++ +K L+E ++E + +
Sbjct: 691 DAM-YKVRKREEAKELFDSISATGLVPNASTYGVM--IKNLLKEGSVEEADNM 740
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 150/338 (44%), Gaps = 10/338 (2%)
Query: 158 SGVVDALLKAICSSV---GKKEVYALWD-IVKEIGEKEKGVLTVEILNELIALFSKLGKG 213
+G AL +A S+ G AL++ I +E + TV N L+ + +
Sbjct: 76 NGFFTALARAPSSAACRDGPSLAVALFNRICREEARPRVALPTVCTYNILMDCCCRTRRP 135
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC-EKMIETGSLPDSEKVGK 272
F +F +F G + ++ L K D ++ +M E G PD+
Sbjct: 136 TVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNLLLHRMPELGVEPDTISYNT 195
Query: 273 IISWFCKGGKAKEA-HVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDF 329
++ C+ +++ A +++T+ ++ P +VV + +I L +E E K A ++ +
Sbjct: 196 VVKTLCEDSRSQRALDLLHTMVKKSGGCSP-NVVTYNTVIHGLFREGEVSK-ACNLFHEM 253
Query: 330 SGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
+ + ++S+I +LC+ + + A+ +L +MIS G P +N +I YS +G
Sbjct: 254 MQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQW 313
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
M + M S+GL P++ T MS G+ +EA E + + + VTY L
Sbjct: 314 KETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVL 373
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
+ GY F L L N M+ G+ + +N +I +
Sbjct: 374 LHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDA 411
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 98/209 (46%), Gaps = 6/209 (2%)
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI--SEGPPP 371
+ D+ V L L + + E + +++V+++LC A LL M+ S G P
Sbjct: 169 RSDDVVNLLLHRMPELGVEPDTIS---YNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSP 225
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+N+VI + G+++ A + M +G+ PDV TYT ++ M++A +L
Sbjct: 226 NVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVL 285
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
+ N + + VTY+ +I GY ++ + EM G+ PN+ N + SLC K
Sbjct: 286 RQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLC-K 344
Query: 492 ALDWRTAEKLLEDMRLKGLHLNGITRALI 520
+ A + + M KG N +T +++
Sbjct: 345 HGKSKEAAEFFDSMAAKGHKPNLVTYSVL 373
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 97/248 (39%), Gaps = 11/248 (4%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
++++ ++C E + ++D V IGE+ V N LI + +GK + AF V +
Sbjct: 512 NSIINSLCKEGRVVEAHDIFDFVIHIGERPD----VITFNSLIDGYGLVGKIEKAFGVLD 567
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G + +Y I+ R D + +M+ G P + G I+ G
Sbjct: 568 AMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDG 627
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ---EDETVKLALDMLDDFSGEARKYAI 338
+ A + E S ++ LC+ +DE A+ M K+ I
Sbjct: 628 RTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDE----AIAMFKKLGAMNVKFNI 683
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
+++I ++ +++ AK L + + G P + + +I K G + A M L
Sbjct: 684 AIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSL 743
Query: 399 MRSRGLKP 406
M G P
Sbjct: 744 MEKSGCAP 751
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 98/255 (38%), Gaps = 1/255 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+ N +I K G+ A ++F+ G + T+ I+ + A+ V +
Sbjct: 508 IVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLD 567
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
MI G PD +I +C+ G+ + +++ K + P ++ L +
Sbjct: 568 AMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDG 627
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
TV A M + I ++ LCR A + K+ + A+
Sbjct: 628 RTVG-AKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAII 686
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N++I A K A E+ + + GL P+ TY ++ G +EEA + + +K
Sbjct: 687 NTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEK 746
Query: 437 NHSRLSPVTYHTLIR 451
+ S + +IR
Sbjct: 747 SGCAPSSRLLNYIIR 761
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 149/316 (47%), Gaps = 8/316 (2%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +IA + GKG A +VF++ D G V N TY I+ + + + + ++M+
Sbjct: 20 NVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLH 79
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ ++S C+ G+ E V+ M+P + L L + E+
Sbjct: 80 DGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRT 139
Query: 321 LALDMLDDFSGEARKYAI---KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
ML F+ +K + S ++ LC+ V A+ +L ++ G P ++N
Sbjct: 140 ----MLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYN 195
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
++I+ Y + D+ A + + M+SR ++PD TY L++G + +A +++ E +K+
Sbjct: 196 TLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKS 255
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
S T++TLI Y + + +L++M+ G++ +V + ++++ C K
Sbjct: 256 GVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFC-KNGKIPE 314
Query: 498 AEKLLEDMRLKGLHLN 513
A +L+DM K + N
Sbjct: 315 AVAILDDMIYKDVAPN 330
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 137/316 (43%), Gaps = 34/316 (10%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
++ G+ + +F + G + T + L + A V E ++ TG +P
Sbjct: 131 LTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPT 190
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ-------ED--- 316
+ +I+ +C+ + A ++ + + + P LI+ LC+ ED
Sbjct: 191 TVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVM 250
Query: 317 -----------ETVKLALD-------------MLDDFSGEARKYAIKPFSSVIRSLCRMK 352
ET +D +L D + K + F SV+++ C+
Sbjct: 251 EMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNG 310
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT 412
+ A +L MI + P V+NS+I AY ++GD A +++ M++ G+ + TY
Sbjct: 311 KIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYN 370
Query: 413 GLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
L+ G Q++EA E++ + R V+Y+T+I C + D AL+LL EM
Sbjct: 371 LLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKY 430
Query: 473 GVQPNVDEYNKLIQSL 488
G++P + Y+ L+ +L
Sbjct: 431 GIRPTLRTYHTLVSAL 446
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 119/274 (43%), Gaps = 1/274 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI KL A ++ + G + ET+ I+A + ++V M +
Sbjct: 230 NALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQ 289
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G D G ++ FCK GK EA + K + P V +I + + +T +
Sbjct: 290 KGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQ 349
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A +++ +I ++ +++ LCR + A+ L+ + ++G P +N++I
Sbjct: 350 -AFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTII 408
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
SA GD A+E+L+ M G++P + TY L+S A+ G++ + + + +
Sbjct: 409 SACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVE 468
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV 474
S Y ++ Y + E L EM + G+
Sbjct: 469 PSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 502
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 2/188 (1%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++++I + D+ L +M+ +GP P +N ++S +AG M ++ M
Sbjct: 54 YNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMA 113
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
S + PD +TY+ L G G+ + E+ K L T L+ G CK +
Sbjct: 114 SHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVA 173
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RAL 519
A ++L + G+ P YN LI C + D R A + E M+ + + + IT AL
Sbjct: 174 KAEQVLEMLVHTGLVPTTVIYNTLINGYC-QVRDLRGAFCIFEQMKSRHIRPDHITYNAL 232
Query: 520 IRAVKELE 527
I + +LE
Sbjct: 233 INGLCKLE 240
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 77/156 (49%), Gaps = 2/156 (1%)
Query: 366 SEGPPPGNAV-FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
SEG PP +A +N VI+ ++G + A+++ M G+ P+ TY ++ G+ GG +
Sbjct: 8 SEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDL 67
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
E + ++ + + + VTY+ L+ G C+ D L++EM + P+ Y+ L
Sbjct: 68 EAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSIL 127
Query: 485 IQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
L + + RT L + KG+ L T +++
Sbjct: 128 FDGLT-RTGESRTMLSLFAESLKKGVMLGAYTCSIL 162
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 100/224 (44%), Gaps = 12/224 (5%)
Query: 190 KEKGVLTVEI-LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
++KG+ + I ++ F K GK A + + N + Y I+A
Sbjct: 288 QQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDT 347
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH-VVYTLAREKKMYPPQSVVAF 307
+ A+ + EKM +G ++ C+ + EA ++YTL R + + P
Sbjct: 348 EQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTL-RNQGLRPDVVSYNT 406
Query: 308 LISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSK 363
+IS+ C + +T K AL++L E KY I+P + +++ +L VH + L +
Sbjct: 407 IISACCNKGDTDK-ALELLQ----EMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQ 461
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
M+ + P ++++ ++ AY + + + + K M +G+ D
Sbjct: 462 MLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 505
>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 418
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 124/244 (50%), Gaps = 2/244 (0%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
+I+ + + G ++A Y L +E K P ++ L + + KL +D
Sbjct: 72 LITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHL-MKLKYFKLVWGFYEDSLEC 130
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
++ F+ ++ C+ ++ A+++ + G P FN++++ Y + GD+
Sbjct: 131 GYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEG 190
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
+ M++ G++PDVYTY+ L++G +M+ A E+ NE N + VT+ TLI G
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDG 250
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
+CK D A+++ +M + P++ YN LI LC K D + A+ L+++M +KGL
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG-DLKQAQDLIDEMSMKGLKP 309
Query: 513 NGIT 516
+ +T
Sbjct: 310 DKVT 313
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 126/281 (44%), Gaps = 12/281 (4%)
Query: 235 YYFTI--EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTL 292
Y+F I + A SV + + + G P + +++ + + G E +
Sbjct: 137 YFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKNA 196
Query: 293 AREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSL 348
+ + P + LI+ LC+E + +D ++ E + P F+++I
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESK-----MDYANELFNEMLDNGLVPNGVTFTTLIDGH 251
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
C+ V A + +M+S+ P +N++I K GD+ A +++ M +GLKPD
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNE 468
TYT L+ G G +E A E K + RL V Y LI G C+ A K+L E
Sbjct: 312 VTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 469 MKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
M VG++P + Y +I C K W T KL+++M+ G
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVW-TGSKLMKEMQRDG 411
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 127/284 (44%), Gaps = 5/284 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ C K +++D + + G + V N L+ + +LG F + N
Sbjct: 140 NILMHRFCKEGEIKLAQSVFDAITKWGLRPTAV----SFNTLMNGYIRLGDLDEGFRLKN 195
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G + TY I L + D+A + +M++ G +P+ +I CK G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ A +Y + + P LI LC++ + +K A D++D+ S + K +
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD-LKQAQDLIDEMSMKGLKPDKVTY 314
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+++I C+ D+ A +MI E + + ++IS + G A +ML+ M S
Sbjct: 315 TTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
GLKP++ TYT +++ + G + +++ E +++ S VT
Sbjct: 375 VGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 121/283 (42%), Gaps = 1/283 (0%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
++ N L+ F K G+ K A VF+ +G ++ + R D + +
Sbjct: 135 SLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLK 194
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
M +G PD +I+ CK K A+ ++ + + P LI C+
Sbjct: 195 NAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKN 254
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
V LA+++ ++ + ++++I LC+ D+ A+ L+ +M +G P
Sbjct: 255 GR-VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVT 313
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+ ++I K GD+ A E K M ++ D YT L+SG G+ +A ++L E
Sbjct: 314 YTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 373
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
+ TY +I +CK + KL+ EM+ G P+V
Sbjct: 374 SVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSV 416
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 112/232 (48%), Gaps = 17/232 (7%)
Query: 301 PQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDV 354
P S+ F L+ C+E E +KLA + D + K+ ++P F++++ R+ D+
Sbjct: 133 PASLYFFNILMHRFCKEGE-IKLAQSVFDAIT----KWGLRPTAVSFNTLMNGYIRLGDL 187
Query: 355 HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
L + M + G P ++ +I+ K M A E+ M GL P+ T+T L
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTL 247
Query: 415 MSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
+ G+ G+++ A EI + LSP +TY+TLI G CK + A L++EM
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQS--LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK 305
Query: 473 GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAV 523
G++P+ Y LI C K D TA + + M + + L+ + ALI +
Sbjct: 306 GLKPDKVTYTTLIDGSC-KEGDLETAFEYRKRMIKENIRLDDVAYTALISGL 356
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/156 (19%), Positives = 67/156 (42%), Gaps = 19/156 (12%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS-EGPPPGNAVFNSVISAYSKAGDMTPAM 393
++ ++ + ++I LC + + AKTL+ ++S +G +AVF +++
Sbjct: 10 RHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGQGSASAVFAAILETKGTQ------- 62
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
+ D+Y ++GL++ Y G + +A E K++ R+ T ++
Sbjct: 63 -----------RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHL 111
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
KL+ F + + G ++ +N L+ C
Sbjct: 112 MKLKYFKLVWGFYEDSLECGYPASLYFFNILMHRFC 147
>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 592
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 130/292 (44%), Gaps = 3/292 (1%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
ILN +I L F V G + T+ I L + A + + +
Sbjct: 113 ILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHV 172
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVV-AFLISSLCQEDE 317
+TG D + G +I+ CK GK EA V + E++ + P VV + ++ LC+ D
Sbjct: 173 EKTGYRSDVKTYGVLINGLCKMGKTSEA-VGWLRKMEERNWNPNVVVYSTVMDGLCK-DG 230
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
V AL + + SG+ K + ++ +I+ LC A +LL +M+ G P N
Sbjct: 231 LVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLN 290
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
++ K G + A ++ M G PDV+TY L+ Y QM+EA +
Sbjct: 291 ILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSR 350
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
V Y +LI G+CK++ + A+ LL+EM VG P+V + LI C
Sbjct: 351 GCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFC 402
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 124/283 (43%), Gaps = 2/283 (0%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G N TY I+ L + A S+ ++M++ G +PD + + ++ CK GK +A
Sbjct: 246 GIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQA 305
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
V P LI C +++ + A + + I ++S+I
Sbjct: 306 KSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDE-ATRVFELMVSRGCLPDIVAYTSLIH 364
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
C++K+++ A LL +MI G P + ++I + + G A E+ M G P
Sbjct: 365 GWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVP 424
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
++ T ++ G + EA + + +K++ L+ V Y ++ G C + + AL+L
Sbjct: 425 NLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELF 484
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
+ + G+Q NV Y +I + L AE LL +M G
Sbjct: 485 SCLPAKGLQINVYAYTIMINGFAKQGL-LDKAEDLLSNMEENG 526
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 113/242 (46%), Gaps = 16/242 (6%)
Query: 278 CKGGKAKEA----HVVYTLAREKKMYPPQSVVAF-LISSLCQEDETVKLALDMLDDFSGE 332
CK GK K + +T+A KM P SV+ F L+ + + A+ ++ +
Sbjct: 48 CKSGKLKSIDEALNFFHTMA---KMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSS 104
Query: 333 ARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD 388
IKP + VI SLC +K V ++L M+ G P F +I+ GD
Sbjct: 105 ---LGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGD 161
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHT 448
+ A+E++ + G + DV TY L++G G+ EA L + ++ + + V Y T
Sbjct: 162 VGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYST 221
Query: 449 LIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLK 508
++ G CK AL L EM G++PN+ Y LIQ LC W+ A LL++M
Sbjct: 222 VMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLC-NFGRWKEAGSLLDEMMKM 280
Query: 509 GL 510
G+
Sbjct: 281 GV 282
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 114/251 (45%), Gaps = 2/251 (0%)
Query: 242 LSRRKIFDWAWSVCEKMIET-GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP 300
+ + K + A S+ ++M + G PD+ + +I+ C V + + P
Sbjct: 85 IVKMKHYTTAISLVKEMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEP 144
Query: 301 PQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTL 360
LI+ LC + + V A++++D + +K + +I LC+M A
Sbjct: 145 SVVTFTILINGLCVKGD-VGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGW 203
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
L KM P V+++V+ K G ++ A+ + M +G+KP++ TYT L+ G N
Sbjct: 204 LRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCN 263
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
G+ +EA +L+E K + + L+ CK + A ++ M VG P+V
Sbjct: 264 FGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFT 323
Query: 481 YNKLIQSLCLK 491
YN LI CL+
Sbjct: 324 YNSLIDRYCLQ 334
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 139/326 (42%), Gaps = 5/326 (1%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
L++ +C+ KE +L D + ++G ++ LN L+ + K GK A V
Sbjct: 256 CLIQGLCNFGRWKEAGSLLDEMMKMGVMPD----LQSLNILVDVLCKEGKIMQAKSVIGF 311
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G V + TY I+ + D A V E M+ G LPD +I +CK
Sbjct: 312 MILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKN 371
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+A + + P LI CQ + A ++ + + ++ +
Sbjct: 372 INKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLA-AKELFLNMHKYGQVPNLQTCA 430
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
++ LC+ + + A +L M +++ ++ AG + A+E+ + ++
Sbjct: 431 IILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAK 490
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
GL+ +VY YT +++G+A G +++A ++L+ ++N TY+ ++G E +
Sbjct: 491 GLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARS 550
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSL 488
+K L M+D G + +I L
Sbjct: 551 IKYLTMMRDKGFSVDATTTEMIINYL 576
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 166/359 (46%), Gaps = 16/359 (4%)
Query: 191 EKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDW 250
E G+ V N L++ K GK A ++++ G N +Y I R+ +
Sbjct: 361 ESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINA 420
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A V ++M++ G P++ ++ + K G + A ++ ++ + P + + +I
Sbjct: 421 ACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIK 480
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
LC+ + + D+ + F + P++++I + +++ A + +M G
Sbjct: 481 GLCKAGRSFE-GRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGIT 539
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P + S+I + K ++ A+++L M+ +GLK D+ Y L+ G+ M+ A E+
Sbjct: 540 PSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHEL 599
Query: 431 LNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
LNE + + LSP Y+++I G+ + + A+ L +M + G+ ++ Y LI L
Sbjct: 600 LNELRG--AGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGL 657
Query: 489 -----CLKALDWRT---AEKLLEDMRLKGLHLNGI-TRALIRAVKELEEDAIENGEALV 538
L A D T ++ +L D R + +NG+ + +++ ED NG+ ++
Sbjct: 658 LKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDM--NGKNMI 714
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 169/379 (44%), Gaps = 43/379 (11%)
Query: 143 LVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNE 202
L L +++V K + V +L+K C + L + + E G V +
Sbjct: 248 LRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKV----TYSV 303
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K G + AFE +++ G ++ + +E + + + A+++ +E+G
Sbjct: 304 LIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESG 363
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDE--- 317
L + ++SW CK GK EA ++ K + P +VV++ +I C++D
Sbjct: 364 -LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISP--NVVSYNNIILGHCRKDNINA 420
Query: 318 TVKLALDMLDD-FSGEARKYAI------------KPFSS------------------VIR 346
K+ +MLD+ F+ A + I FS +I+
Sbjct: 421 ACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIK 480
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
LC+ + L +K +S+G P +N++I + K G++ A + + M G+ P
Sbjct: 481 GLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITP 540
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
TYT L+ G+ G ++ A ++LN+ K+ ++ Y TLI G+CK + A +LL
Sbjct: 541 STVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELL 600
Query: 467 NEMKDVGVQPNVDEYNKLI 485
NE++ G+ PN YN +I
Sbjct: 601 NELRGAGLSPNRFIYNSMI 619
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 134/298 (44%), Gaps = 2/298 (0%)
Query: 190 KEKGVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
K+ +L T L +I K G+ ++FNKF G V Y I+ +
Sbjct: 464 KDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNI 523
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
+ A +V +M E G P + +I FCKG A + + K + L
Sbjct: 524 NLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTL 583
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
I C+ + +K A ++L++ G ++S+I M +V A L KM++EG
Sbjct: 584 IDGFCKRRD-MKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEG 642
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P + S+I K+G + A ++ M S+G+ PD +T L++G N GQ E A
Sbjct: 643 IPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENAR 702
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
+IL + + S + Y+TLI G+ K A +L +EM D G+ P+ Y+ L+
Sbjct: 703 KILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVN 760
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 108/222 (48%), Gaps = 5/222 (2%)
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
PP+ +I++ C ++ V AL + DD + + +S+++ C ++ A
Sbjct: 226 PPEGTFTSVITA-CVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALV 284
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
L++++ G P ++ +I K G++ A E M+++G++ VY+ ++ GY
Sbjct: 285 LVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYL 344
Query: 420 NGGQMEEACEILNEAKKNHSRLSPV-TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
+ A + N+A + S L+ V T++TL+ CK + + A L +E+ G+ PNV
Sbjct: 345 KCQSWQNAFTMFNDALE--SGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNV 402
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
YN +I C K + A K+ ++M G N +T ++
Sbjct: 403 VSYNNIILGHCRKD-NINAACKVYKEMLDNGFTPNAVTFTIL 443
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 1/170 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+S + LC + A +LL +M + G P F SVI+A K G++ A+ + M
Sbjct: 196 YSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMV 255
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+ G ++ T LM GY G + A ++NE ++ + VTY LI G CK +
Sbjct: 256 NCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIE 315
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
A + +EMK G++ +V N +++ LK W+ A + D GL
Sbjct: 316 KAFEFYSEMKTKGIRSSVYSLNSILEGY-LKCQSWQNAFTMFNDALESGL 364
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 94/256 (36%), Gaps = 36/256 (14%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I F K G A V+ + + G + TY I+ + D A + M
Sbjct: 511 NTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKR 570
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G D + G +I FCK K AH + R + P + + +I+ + V+
Sbjct: 571 KGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGF-KNMNNVE 629
Query: 321 LALDMLDDFSGEARKYAIKPFSSVI----------------------------------- 345
A+D+ E +K ++S+I
Sbjct: 630 EAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLI 689
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
LC A+ +L M + P ++N++I+ + K G++ A + M RGL
Sbjct: 690 NGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLV 749
Query: 406 PDVYTYTGLMSGYANG 421
PD TY L++G G
Sbjct: 750 PDNITYDILVNGKFKG 765
>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 418
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 164/391 (41%), Gaps = 57/391 (14%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
L++ + S GK A++ + E ++ + + + LI + + G + A E +
Sbjct: 34 TLIQIVVSRKGKGSASAVFAAILETKGTQRS--DIYVFSGLITAYLESGFLRDAIECYRL 91
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
++ +T +E L + K F W E+ +E G ++ FCK G+
Sbjct: 92 TKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGE 151
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAF----------------------------------- 307
+ A V+ + + P SVV+F
Sbjct: 152 IRLAQSVFDAITKWGLRP--SVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTY 209
Query: 308 --LISSLCQE---DETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAK 358
LI+ LC+E D+ +L +MLD+ + P F+++I C+ V A
Sbjct: 210 SVLINGLCKESKLDDANELFDEMLDN--------GLVPNSVSFTTLIDGHCKDGRVDLAM 261
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+ +M+S+ P +N++I K GD+ A +++ M +GLKPD TYT L+ G
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGS 321
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G +E A E K + RL V Y LI G C+ A K+L EM VG++P +
Sbjct: 322 CKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEI 381
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
Y +I C K W T KL+++M+ G
Sbjct: 382 GTYTMIINEFCKKGDVW-TGSKLMKEMQRDG 411
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 125/244 (51%), Gaps = 2/244 (0%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
+I+ + + G ++A Y L +E K P ++ L + + KL ++
Sbjct: 72 LITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHL-MKLKYFKLVWGFYEESLEC 130
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
++ F+ ++ S C+ ++ A+++ + G P FN++++ Y K GD+
Sbjct: 131 GYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEG 190
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
+ M++ G++PDVYTY+ L++G ++++A E+ +E N + V++ TLI G
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDG 250
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
+CK D A+++ +M + P++ YN LI LC K D + A+ L+ +M +KGL
Sbjct: 251 HCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLC-KNGDLKQAQDLINEMSMKGLKP 309
Query: 513 NGIT 516
+ IT
Sbjct: 310 DKIT 313
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 129/284 (45%), Gaps = 5/284 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ + C + +++D + + G + +V N L+ + KLG F + N
Sbjct: 140 NILMHSFCKEGEIRLAQSVFDAITKWGLRP----SVVSFNTLMNGYIKLGDLNEGFRLKN 195
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G + TY I L + D A + ++M++ G +P+S +I CK G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDG 255
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ A +Y + + P LI LC+ + +K A D++++ S + K +
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGD-LKQAQDLINEMSMKGLKPDKITY 314
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+++I C+ D+ A +MI E + + ++IS + G A +ML+ M S
Sbjct: 315 TTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
GLKP++ TYT +++ + G + +++ E +++ S VT
Sbjct: 375 VGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 125/283 (44%), Gaps = 1/283 (0%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
++ N L+ F K G+ + A VF+ +G + ++ + + + + +
Sbjct: 135 SLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLK 194
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
M +G PD +I+ CK K +A+ ++ + + P LI C+
Sbjct: 195 NAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCK- 253
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
D V LA+++ ++ + ++++I LC+ D+ A+ L+++M +G P
Sbjct: 254 DGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKIT 313
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+ ++I K GD+ A E K M ++ D YT L+SG G+ +A ++L E
Sbjct: 314 YTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 373
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
+ TY +I +CK + KL+ EM+ G P+V
Sbjct: 374 SVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSV 416
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 78/178 (43%), Gaps = 20/178 (11%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS-EGPPPGNAVFNSVISAYSKAGDMTPAM 393
++ ++ + ++I LC + + AKTL+ ++S +G +AVF +++
Sbjct: 10 RHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQ------- 62
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
+ D+Y ++GL++ Y G + +A E K++ R+ T ++
Sbjct: 63 -----------RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHL 111
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH 511
KL+ F E + G ++ +N L+ S C K + R A+ + + + GL
Sbjct: 112 MKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFC-KEGEIRLAQSVFDAITKWGLR 168
>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
Length = 704
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 155/354 (43%), Gaps = 10/354 (2%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
V +L++ C AL+D V E G+ + N LI F KLG+ K A E+
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAI----TYNTLIRGFCKLGQLKEASEI 304
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
F + G N TY I+ L A MIE P++ II+ CK
Sbjct: 305 FEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCK 364
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKY 336
G +A + L ++++ P L+ LC + DE KL ML D S
Sbjct: 365 DGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSS--YTDP 422
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ ++++I LC+ +H A + ++ + N ++++ KAGD+ AME+
Sbjct: 423 DVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELW 482
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
K + + + TYT ++ G+ G + A +L + + + + S Y+ L+ CK
Sbjct: 483 KQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKE 542
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
D A +L EM+ P+V +N +I LKA D ++AE LL M GL
Sbjct: 543 GSLDQAWRLFEEMQRDNNFPDVVSFNIMIDG-SLKAGDIKSAESLLVGMSRAGL 595
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 140/306 (45%), Gaps = 8/306 (2%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
L+ L+ + ++ K AF V G N + ++ L R A S+ +M
Sbjct: 110 LSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMR 169
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQ-SVVAF--LISSLCQED 316
+PD +I FC+G KE LA E K S+V + LI + C+
Sbjct: 170 RNSLMPDVFSYNTVIRGFCEG---KELEKALELANEMKGSGCSWSLVTWGILIDAFCKAG 226
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ + A+ L + + + ++S+IR C ++ K L +++ G P +
Sbjct: 227 KMDE-AMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N++I + K G + A E+ + M RG++P+VYTYTGL+ G G+ +EA + LN +
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIE 345
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ VTY+ +I CK A++++ MK +P+ YN L+ LC K D
Sbjct: 346 KDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKG-DLD 404
Query: 497 TAEKLL 502
A KLL
Sbjct: 405 EASKLL 410
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 123/252 (48%), Gaps = 9/252 (3%)
Query: 242 LSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPP 301
L R + + A+S KM+ET + + + ++ + + K A V L ++
Sbjct: 82 LVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFN 141
Query: 302 QSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGA 357
L+ LC+ E K A+ +L E R+ ++ P +++VIR C K++ A
Sbjct: 142 VYNHNILLKGLCRNLECGK-AVSLLR----EMRRNSLMPDVFSYNTVIRGFCEGKELEKA 196
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
L ++M G + +I A+ KAG M AM LK M+ GL+ D+ YT L+ G
Sbjct: 197 LELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRG 256
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
+ + G+++ + +E + +TY+TLIRG+CKL + A ++ M + GV+PN
Sbjct: 257 FCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPN 316
Query: 478 VDEYNKLIQSLC 489
V Y LI LC
Sbjct: 317 VYTYTGLIDGLC 328
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 107/506 (21%), Positives = 196/506 (38%), Gaps = 81/506 (16%)
Query: 79 YAQMDPSADAVESKEEEAYEIDGDKLENVLSLLQSSVD----------GYLESSLDSFEL 128
Y+++ + E+K E +L+N +S+ Q +VD + + S
Sbjct: 29 YSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSLAFAGSNLMAKLVRSRNH 88
Query: 129 DLHEDFVLKVLETP-----LVLGENLVCFFKWVTSGVV-------------------DAL 164
+L F K+LET + L L C+ + +G + L
Sbjct: 89 ELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNIL 148
Query: 165 LKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEIL--NELIALFSKLGKGKAAFEVFNK 222
LK +C ++ + +L + E + L ++ N +I F + + + A E+ N+
Sbjct: 149 LKGLCRNLECGKAVSL------LREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANE 202
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
GC + T+ I+A + D A ++M G D +I FC G+
Sbjct: 203 MKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGE 262
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
++ E+ P LI C+ + +K A ++ + + + ++
Sbjct: 263 LDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQ-LKEASEIFEFMIERGVRPNVYTYT 321
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+I LC + A L+ MI + P +N +I+ K G + A+E+++LM+ R
Sbjct: 322 GLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKR 381
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCK----- 455
+PD TY L+ G G ++EA ++L K+ S P ++Y+ LI G CK
Sbjct: 382 RTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLH 441
Query: 456 --LEEFDC----------------------------ALKLLNEMKDVGVQPNVDEYNKLI 485
L+ +D A++L ++ D + N D Y +I
Sbjct: 442 QALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMI 501
Query: 486 QSLCLKALDWRTAEKLLEDMRLKGLH 511
C + A+ LL MR+ L
Sbjct: 502 DGFCKTGM-LNVAKGLLCKMRVSELQ 526
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 84/200 (42%), Gaps = 1/200 (0%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
+Y I L + A + + ++E D +++ K G +A ++
Sbjct: 426 SYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQI 485
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
+ K+ +I C+ + +A +L + ++ ++ ++ SLC+
Sbjct: 486 SDSKIVRNSDTYTAMIDGFCKTG-MLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGS 544
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
+ A L +M + P FN +I KAGD+ A +L M GL PD++TY+
Sbjct: 545 LDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSK 604
Query: 414 LMSGYANGGQMEEACEILNE 433
L++ + G ++EA ++
Sbjct: 605 LINRFLKLGYLDEAISFFDK 624
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 129/285 (45%), Gaps = 1/285 (0%)
Query: 204 IALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGS 263
I + + GK A+ + + D GC + TY I+AL + D A + KM +
Sbjct: 271 IRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSH 330
Query: 264 LPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLAL 323
PD ++ F G + ++T P L+++LC+ + A
Sbjct: 331 KPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGR-INEAF 389
Query: 324 DMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAY 383
D+LD + + ++++I L R + A L S M S G P + +I +
Sbjct: 390 DLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYH 449
Query: 384 SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
K+G A+E + M++RG+ P++ + A G++ EA + NE K +
Sbjct: 450 GKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDS 509
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
VTY+ +++ Y K+ + D A+KLL+EM V +P+V N LI +L
Sbjct: 510 VTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTL 554
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 152/329 (46%), Gaps = 10/329 (3%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFG-DYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
+L +I + K K A VF KF + G + Y I+ + AW++ E+
Sbjct: 756 VLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEE 815
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M G PD+ +I K GK E +Y + P +IS+L + +
Sbjct: 816 MKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNR 875
Query: 318 TVKLALDMLDDF-SGEARKYAIKP--FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
K A+D+ + SG+ ++ P F +I L + + A + M+ G P +A
Sbjct: 876 LDK-AMDLYYNLVSGD---FSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSA 931
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
++N +++ Y K G + A E K M G++PD+ +YT L+ G++++A +
Sbjct: 932 IYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKL 991
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
K+ V Y+ +I G + + + AL L +EM++ G+ P++ YN LI +L + +
Sbjct: 992 KQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGM- 1050
Query: 495 WRTAEKLLEDMRLKGLHLNGIT-RALIRA 522
A K+ E+++ GL N T ALIR
Sbjct: 1051 IEEAGKIYEELQFIGLKPNVFTYNALIRG 1079
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 151/345 (43%), Gaps = 5/345 (1%)
Query: 177 VYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYY 236
++AL+ K +GE V T E N ++ + + + VF+ N +TY
Sbjct: 105 IHALF-YFKSVGELPNVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYL 163
Query: 237 FTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREK 296
++L R A S EKM E G + ++ +I + + G KEA VY +
Sbjct: 164 IIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSE 223
Query: 297 KMYPP-QSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVH 355
+ P ++ A +++S + +K + +L++ + I ++ IR L R +
Sbjct: 224 GLKPSLKTFSALMVAS--GKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKID 281
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
A ++ +M +G P + +I A A + AM + M+S KPD TY L+
Sbjct: 282 EAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLL 341
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
+++ G +++ +I E + + VT+ L+ CK + A LL+ M+ GV
Sbjct: 342 DKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVL 401
Query: 476 PNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
PN+ YN LI L L+A A L +M G+ T L+
Sbjct: 402 PNLHTYNTLISGL-LRANRLDDALDLFSNMESLGVEPTAYTYILL 445
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 152/365 (41%), Gaps = 28/365 (7%)
Query: 140 ETPLVLGENLVCFFKWVTSGVVDALLKAIC----SSVGKKEVYALWDIVKEIGEKEKGVL 195
E ++ GE LVC V+ ++K +C +SV + KE+G K
Sbjct: 736 EKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARN---VFVKFTKELGVKP---- 788
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
T+++ N LI F ++ + A+ +F + GC + TY I+A + + + +
Sbjct: 789 TLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLY 848
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
++M+ G P++ +IS K + +A +Y P LI L +
Sbjct: 849 DEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKS 908
Query: 316 DETVKLALDMLDD----FSGEARKYAIKPFSSVIRSLC----RMKDVHGAKTLLSKMISE 367
LDD F G Y +P S++ L ++ V A +M+ E
Sbjct: 909 GR--------LDDAHEMFDGMVH-YGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKE 959
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P + ++ AG + A+ + ++ GL PD+ Y +++G + EEA
Sbjct: 960 GIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEA 1019
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
+ +E + TY++LI + + A K+ E++ +G++PNV YN LI+
Sbjct: 1020 LSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRG 1079
Query: 488 LCLKA 492
L
Sbjct: 1080 YTLSG 1084
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 117/284 (41%), Gaps = 1/284 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI K GK F+++++ GC N TY I L + D A + ++
Sbjct: 829 NSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVS 888
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
P G +I K G+ +AH ++ P ++ L++ + V
Sbjct: 889 GDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGH-VD 947
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A + E + +K ++ ++ LC V A K+ G P +N +I
Sbjct: 948 TACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMI 1007
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ ++ A+ + M++RG+ PD+YTY L+ G +EEA +I E + +
Sbjct: 1008 NGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLK 1067
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
+ TY+ LIRGY + A + +M G PN + +L
Sbjct: 1068 PNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 132/306 (43%), Gaps = 6/306 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
L+ K G+ AF++ + G + N TY I L R D A + M G
Sbjct: 375 LVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLG 434
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL- 321
P + +I + K G +A + + + + P ++VA +SL E +L
Sbjct: 435 VEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAP--NIVA-CNASLYSLAEMGRLG 491
Query: 322 -ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A M ++ ++ +++ ++ V A LLS+M P V NS+I
Sbjct: 492 EAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLI 551
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
KAG + A +M M L P V TY L++G GQ+++A ++ +
Sbjct: 552 DTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCS 611
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+ +T++TL+ CK +E D ALK+ +M + +P+V +N +I +K + A
Sbjct: 612 PNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGF-IKQNQIKNAIW 670
Query: 501 LLEDMR 506
L M+
Sbjct: 671 LFHQMK 676
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 139/327 (42%), Gaps = 5/327 (1%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
L+ A+C++ + L+ +K K V V +L++ FS G +++ +
Sbjct: 304 VLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDK----FSDCGHLDKVEKIWTE 359
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + T+ + AL + + A+ + + M + G LP+ +IS + +
Sbjct: 360 MEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANR 419
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+A +++ + P LI + K AL+ + I +
Sbjct: 420 LDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGK-ALETFEKMKARGIAPNIVACN 478
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+ + SL M + AK + +++ S G P + +N ++ YSK G + A+++L M
Sbjct: 479 ASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKV 538
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
+PDV L+ G++EEA ++ ++ + + VTY+ L+ G K + A
Sbjct: 539 QCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKA 598
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLC 489
++L M G PN +N L+ LC
Sbjct: 599 VQLFESMNGHGCSPNTITFNTLLDCLC 625
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 129/311 (41%), Gaps = 13/311 (4%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVL-TVEILNELIALFSKLGKGKAAFEVFNK 222
L+ A+C + E + L D +++ +GVL + N LI+ + + A ++F+
Sbjct: 375 LVNALCKAGRINEAFDLLDTMRK-----QGVLPNLHTYNTLISGLLRANRLDDALDLFSN 429
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G TY I+ + A EKM G P+ + + G+
Sbjct: 430 MESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGR 489
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLI---SSLCQEDETVKLALDMLDDFSGEARKYAIK 339
EA ++ + + P ++ S + Q DE +KL L + S + +
Sbjct: 490 LGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKL----LSEMSKVQCEPDVI 545
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
+S+I +L + V A + +M P +N +++ K G + A+++ + M
Sbjct: 546 VINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESM 605
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
G P+ T+ L+ +++ A ++ + + R +T++T+I G+ K +
Sbjct: 606 NGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQI 665
Query: 460 DCALKLLNEMK 470
A+ L ++MK
Sbjct: 666 KNAIWLFHQMK 676
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 142/328 (43%), Gaps = 44/328 (13%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+A+F + G VF + G + ++TY I + SR +FD A + ++M+E
Sbjct: 404 NTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMME 463
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD ++S +GG+ ++A ++ E+ P + + SSL K
Sbjct: 464 AGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDE----YSYSSLLHAYANAK 519
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLC------------------------------- 349
LD + S + I+P + ++++L
Sbjct: 520 -RLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVL 578
Query: 350 -RMKDVHG-------AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
M ++G + +LS M A +NS++ YS+ GD +L ++S
Sbjct: 579 NAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKS 638
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G++PD Y+Y ++ Y GQM+EA + +E K + + VTY+ ++ Y F+
Sbjct: 639 SGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEE 698
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A++L+ M G +PN YN +++ C
Sbjct: 699 AIELVRYMVTQGCKPNERTYNSIVEGYC 726
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 123/294 (41%), Gaps = 39/294 (13%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSV--CEKMIE 260
L++ FS+ G+ + A VF + D G TY + S+ + W V M E
Sbjct: 160 LVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAV-PWKEVVELVASMKE 218
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD +IS + KEA V+ + P K
Sbjct: 219 HGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPD------------------K 260
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
+ + L D G+AR++ A ++ +M G PP +NS+I
Sbjct: 261 VTFNSLLDVYGKARRH------------------DEAIEVIQEMERVGCPPSVVTYNSLI 302
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
S+Y K G + A+ + + M +G+KPDV TYT L+SG G+++ A +E +N +
Sbjct: 303 SSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCK 362
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
+ TY+ LI+ + +F + + +E + G P++ +N L+ LD
Sbjct: 363 PNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLD 416
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 129/280 (46%), Gaps = 4/280 (1%)
Query: 179 ALWDIVKEIGEK--EKGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETY 235
L+D+ +I ++ E G+ V N +++ ++ G+ + A ++F + + C ++ +Y
Sbjct: 449 GLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSY 508
Query: 236 YFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE 295
+ A + K D ++ + + P + V ++ K EA + R+
Sbjct: 509 SSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQ 568
Query: 296 KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVH 355
K+ +V+ ++S + ++ V+ +L A + ++S++ R+ D
Sbjct: 569 KRCSLDINVLNAMVS-IYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCE 627
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
+ +L+++ S G P +N+VI AY + G M A + M+ GLKPDV TY +
Sbjct: 628 KCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFV 687
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
Y + EEA E++ + + TY++++ GYC+
Sbjct: 688 KSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCR 727
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 149/355 (41%), Gaps = 38/355 (10%)
Query: 175 KEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQET 234
KE ++D +K G + V N L+ ++ K + A EV + GC + T
Sbjct: 242 KEAAQVFDEMKASGFEPDKV----TFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVT 297
Query: 235 YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR 294
Y I + + + + A ++ ++M G PD +IS + GK A V Y
Sbjct: 298 YNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMV 357
Query: 295 EKKMYPPQSVVAFLISSLCQEDETVKL---------ALDMLDDFSGEARKYAIKPFSSVI 345
P +LC + +K+ + + D+F R P
Sbjct: 358 RNGCKP----------NLCTYNALIKMHGVRGKFPEMMAVFDEF----RSAGFVPDIVTW 403
Query: 346 RSLCRMKDVHGAKTLLSKMISE----GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+L + +G + +S + E G P + S+IS+YS+ G AM++ K M
Sbjct: 404 NTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMME 463
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+ PDV TY ++S A GG+ E+A ++ E ++ + +Y +L+ Y + D
Sbjct: 464 AGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDK 523
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCL---KALDWRTAEKLLEDMRLKGLHLN 513
L +++ ++P +N L+++L L K + AEK ++R K L+
Sbjct: 524 MKALSDDIYSERIEP----HNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLD 574
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 97/225 (43%), Gaps = 41/225 (18%)
Query: 328 DFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG 387
+ GE + + ++ IR + R + A LL P P + +++SA+S+AG
Sbjct: 113 ELHGEGVLHHPRVLATAIRVMARAGRLAEASALLDA----APGPDAGAYTALVSAFSRAG 168
Query: 388 ---------------DMTPAM---------------------EMLKLMRSRGLKPDVYTY 411
+ PA+ E++ M+ G+ PD YTY
Sbjct: 169 RFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTY 228
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
L+S +EA ++ +E K + VT+++L+ Y K D A++++ EM+
Sbjct: 229 NTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMER 288
Query: 472 VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
VG P+V YN LI S L A L ++M +KG+ + +T
Sbjct: 289 VGCPPSVVTYNSLISSYVKDGL-LEQAVALKQEMEVKGMKPDVVT 332
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 178/402 (44%), Gaps = 30/402 (7%)
Query: 107 VLSLLQSSVDGYLESS---LDSFELDLHEDFVLKVLETPLVLGENLVCFFKWV------- 156
+L +++ DG+ E + L F L+ D V+++L + L E V FF W
Sbjct: 110 ILDAIRNCDDGFGEKTHIVLRQFRQKLNPDLVVEIL-SFLKSPELCVKFFLWAGRQIGYD 168
Query: 157 -TSGVVDALLKAICSSVGKKEVY--ALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKG 213
T V ALL V ++ Y + ++EI +K VL ++LN LI + G
Sbjct: 169 HTPAVYIALL-----DVFERGSYDRVPEEFLREIRGDDKEVLG-KLLNVLIRKCCRNGLW 222
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
A E + D+G + TY ++ R D A V +M E G D +G
Sbjct: 223 NVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFF 282
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEA 333
CK GK +EA +L ++ P + +IS LC E + A+D L+ +
Sbjct: 283 AQALCKVGKWREA---LSLIEKEDFVPNTILYNKMISGLC-EASFFEEAMDFLNRMRSTS 338
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
++ + ++ K + K +LS MI+EG P +FNS++ AY K+ D + A
Sbjct: 339 CIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAY 398
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQM------EEACEILNEAKKNHSRLSPVTYH 447
++LK M KP Y L+ +GG++ E A + NE + L+ V
Sbjct: 399 KLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVV 458
Query: 448 TLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ R C +F+ A K+++EM G P+ Y+++I LC
Sbjct: 459 SFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLC 500
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 144/336 (42%), Gaps = 18/336 (5%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
+E+I + + AF +F + G V + TY I+ S+ I A + ++M+
Sbjct: 493 SEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVR 552
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P +I + K K A+ ++ L K +P LI C+ K
Sbjct: 553 DGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEK 612
Query: 321 LALDMLDDFSGEA------------RKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKM 364
A + G+A A KP + +++ LC+ V A+ LL M
Sbjct: 613 -ACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETM 671
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
+G P V++++I + KA + A E+ M RG P+VYTY+ L+ ++
Sbjct: 672 FVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRL 731
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
+ ++L++ +N + V Y +I G K+ + D A KL+ M++ G +PNV Y +
Sbjct: 732 DLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAM 791
Query: 485 IQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
I KA +L +M KG N +T ++
Sbjct: 792 IDGFG-KAGKVDKCLELFREMGSKGCAPNFVTYTVL 826
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 133/329 (40%), Gaps = 12/329 (3%)
Query: 166 KAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGD 225
+A+C VGK W + EKE V + N++I+ + + A + N+
Sbjct: 284 QALCK-VGK------WREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRS 336
Query: 226 YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKE 285
C+ N +TY + +K + MI G P ++ +CK
Sbjct: 337 TSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSY 396
Query: 286 AHVVYTLAREKKMYPPQSVVAFLISSLCQEDE-----TVKLALDMLDDFSGEARKYAIKP 340
A+ + + + P V LI S+C E T +LA ++
Sbjct: 397 AYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVN 456
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
S R LC A ++ +M+ G P + ++ VI A + A + K M+
Sbjct: 457 VVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMK 516
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G+ PDVYTYT L+ ++ G +++A L+E ++ + VTY TLI Y K ++
Sbjct: 517 GTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVS 576
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A +L M G PNV Y LI C
Sbjct: 577 VANELFELMIAKGCFPNVITYTALIDGYC 605
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 130/335 (38%), Gaps = 52/335 (15%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI FSK G K A ++ GC TY I A + K A + E MI G
Sbjct: 530 LIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKG 589
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR------EKKMY----------PPQSVVA 306
P+ +I +CK G ++A +Y R + MY P
Sbjct: 590 CFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYG 649
Query: 307 FLISSLCQEDETVKLALDML-------------------DDFSGEA-------------- 333
L+ LC+ + VK A D+L D F A
Sbjct: 650 ALVDGLCKAHK-VKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVE 708
Query: 334 RKYA--IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
R Y + +SS+I L + K + +LSKM+ P ++ +I SK
Sbjct: 709 RGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDE 768
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
A +++ +M +G KP+V TYT ++ G+ G++++ E+ E + VTY LI
Sbjct: 769 AYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLIN 828
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
C D A LL EMK +V Y K+I+
Sbjct: 829 HCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIE 863
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 115/258 (44%), Gaps = 3/258 (1%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
N TY ++ L + A + E M G P++ +I FCK K EA V+
Sbjct: 644 NVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVF 703
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
E+ P + LI L + D+ + L L +L + I ++ +I L +
Sbjct: 704 HKMVERGYNPNVYTYSSLIDRLFK-DKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSK 762
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ A L+ M +G P + ++I + KAG + +E+ + M S+G P+ T
Sbjct: 763 VAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVT 822
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
YT L++ G ++EA +L E K+ + +Y +I GY + EF +L LL E++
Sbjct: 823 YTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKR--EFILSLGLLEEVE 880
Query: 471 DVGVQPNVDEYNKLIQSL 488
G P + Y LI +
Sbjct: 881 KNGSAPTILLYKVLIDNF 898
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 101/241 (41%), Gaps = 13/241 (5%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
+ I E+I SK+ K A+++ + GC N TY I+ + D +
Sbjct: 749 NIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELF 808
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+M G P+ +I+ C G EA+ + L K+ Y P+ V SS C+
Sbjct: 809 REMGSKGCAPNFVTYTVLINHCCATGHLDEAYAL--LEEMKQTYWPKHV-----SSYCKV 861
Query: 316 DETVK----LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP-- 369
E K L+L +L++ I + +I + + + A L ++IS
Sbjct: 862 IEGYKREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSM 921
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
++ S+I ++S A + A E+ M G+ PD+ T+ L+ G + EEA +
Sbjct: 922 TAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQ 981
Query: 430 I 430
+
Sbjct: 982 L 982
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 149/317 (47%), Gaps = 8/317 (2%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +IA + GKG A +VF++ D G V N TY I+ + + + + ++M+
Sbjct: 198 NVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLH 257
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ ++S C+ G+ E V+ M+P + L L + E+
Sbjct: 258 DGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRT 317
Query: 321 LALDMLDDFSGEARKYAI---KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
ML F+ +K + S ++ LC+ V A+ +L ++ G P ++N
Sbjct: 318 ----MLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYN 373
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
++I+ Y + D+ A + + M+SR ++PD TY L++G + +A +++ E +K+
Sbjct: 374 TLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKS 433
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
S T++TLI Y + + +L++M+ G++ +V + ++++ C K
Sbjct: 434 GVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFC-KNGKIPE 492
Query: 498 AEKLLEDMRLKGLHLNG 514
A +L+DM K + N
Sbjct: 493 AVAILDDMIYKDVAPNA 509
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 137/316 (43%), Gaps = 34/316 (10%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
++ G+ + +F + G + T + L + A V E ++ TG +P
Sbjct: 309 LTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPT 368
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ-------ED--- 316
+ +I+ +C+ + A ++ + + + P LI+ LC+ ED
Sbjct: 369 TVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVM 428
Query: 317 -----------ETVKLALD-------------MLDDFSGEARKYAIKPFSSVIRSLCRMK 352
ET +D +L D + K + F SV+++ C+
Sbjct: 429 EMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNG 488
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT 412
+ A +L MI + P V+NS+I AY ++GD A +++ M++ G+ + TY
Sbjct: 489 KIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYN 548
Query: 413 GLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
L+ G Q++EA E++ + R V+Y+T+I C + D AL+LL EM
Sbjct: 549 LLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKY 608
Query: 473 GVQPNVDEYNKLIQSL 488
G++P + Y+ L+ +L
Sbjct: 609 GIRPTLRTYHTLVSAL 624
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 119/274 (43%), Gaps = 1/274 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI KL A ++ + G + ET+ I+A + ++V M +
Sbjct: 408 NALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQ 467
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G D G ++ FCK GK EA + K + P V +I + + +T +
Sbjct: 468 KGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQ 527
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A +++ +I ++ +++ LCR + A+ L+ + ++G P +N++I
Sbjct: 528 -AFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTII 586
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
SA GD A+E+L+ M G++P + TY L+S A+ G++ + + + +
Sbjct: 587 SACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVE 646
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV 474
S Y ++ Y + E L EM + G+
Sbjct: 647 PSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 680
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 116/277 (41%), Gaps = 13/277 (4%)
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEA-HVVYTLAREKKMYPPQS-----VVAFLISS 311
++ G+ PD+ K++ G A +V + R + PP + V+A L S
Sbjct: 148 LVAAGARPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRS 207
Query: 312 LCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
D AL + D+ ++++I + D+ L +M+ +GP P
Sbjct: 208 GKGSD-----ALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKP 262
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+N ++S +AG M ++ M S + PD +TY+ L G G+ +
Sbjct: 263 NIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLF 322
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
E+ K L T L+ G CK + A ++L + G+ P YN LI C +
Sbjct: 323 AESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYC-Q 381
Query: 492 ALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAVKELE 527
D R A + E M+ + + + IT ALI + +LE
Sbjct: 382 VRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLE 418
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 100/224 (44%), Gaps = 12/224 (5%)
Query: 190 KEKGVLTVEI-LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
++KG+ + I ++ F K GK A + + N + Y I+A
Sbjct: 466 QQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDT 525
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH-VVYTLAREKKMYPPQSVVAF 307
+ A+ + EKM +G ++ C+ + EA ++YTL R + + P
Sbjct: 526 EQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTL-RNQGLRPDVVSYNT 584
Query: 308 LISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSK 363
+IS+ C + +T K AL++L E KY I+P + +++ +L VH + L +
Sbjct: 585 IISACCNKGDTDK-ALELLQ----EMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQ 639
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
M+ + P ++++ ++ AY + + + + K M +G+ D
Sbjct: 640 MLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683
>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Brachypodium distachyon]
Length = 673
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 135/318 (42%), Gaps = 7/318 (2%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
+LG+ A + +GCV + Y I AL + + A ++ ++M G D
Sbjct: 182 LCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSAD 241
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
I+ C G+ +EA + + P FL+ LC + V+ A ML
Sbjct: 242 VNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQ-VEEARTML 300
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
G + + F++VI + A L M S+G PP ++ +I K
Sbjct: 301 ----GRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKL 356
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
G + AM++L+ M +G P + TYT L+ + G + +L ++ Y
Sbjct: 357 GRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGY 416
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
+ +I CK D A++ + EMK G +P++ YN +I LC AE L E++
Sbjct: 417 NGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLC-NNNQMEEAEYLFENLL 475
Query: 507 LKGLHLNGIT-RALIRAV 523
+G+ N IT LI A+
Sbjct: 476 HEGVVANAITYNTLIHAL 493
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 155/359 (43%), Gaps = 14/359 (3%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
++ A+C+ G E L D + +G V N+++ LG+ + A + ++
Sbjct: 213 VIHALCAQGGVNEAATLLDEMFLMGCSAD----VNTFNDIVHGLCTLGRLREAARLVDRM 268
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV--GKIISWFCKGG 281
GCV N TY F ++ L A V E G +P+ V +I G
Sbjct: 269 MIRGCVPNAITYGFLLKGLC------LASQVEEARTMLGRVPELNVVLFNTVIGRCLLDG 322
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
K KEA +Y K P + LI LC+ + A+ +L + + +I +
Sbjct: 323 KLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGR-LGSAMKLLREMEDKGFAPSIVTY 381
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+ ++ S CR + +L M +G +N +I A K M AM ++ M+S
Sbjct: 382 TILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKS 441
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
+G KPD+ TY ++ N QMEEA + + +TY+TLI + +
Sbjct: 442 QGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQD 501
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
A+ L N+M G ++ YN LI++LC R+ LL +M KG+ N ++ L+
Sbjct: 502 AISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSI-MLLSEMAEKGIKPNNVSYNLL 559
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 154/367 (41%), Gaps = 15/367 (4%)
Query: 151 CFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKL 210
C +T G LLK +C + +E + V E L V + N +I
Sbjct: 273 CVPNAITYGF---LLKGLCLASQVEEARTMLGRVPE--------LNVVLFNTVIGRCLLD 321
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
GK K A E++ G GC + TY I L + A + +M + G P
Sbjct: 322 GKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTY 381
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
++ FC+ G + + +K + +I ++C+ D + A+ + +
Sbjct: 382 TILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCK-DRRMDDAMRFMQEMK 440
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
+ K I ++++I LC + A+ L ++ EG +N++I A + G
Sbjct: 441 SQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQ 500
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A+ + M G D+ +Y GL+ G ++ + +L+E + + + V+Y+ LI
Sbjct: 501 DAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLI 560
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW-RTAEKLLEDMRLKG 509
CK AL+L EM + + P++ YN LI LC + W A LLE + +
Sbjct: 561 SELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLC--KMGWMHAALNLLEKLHNED 618
Query: 510 LHLNGIT 516
+H + IT
Sbjct: 619 VHADIIT 625
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 124/279 (44%), Gaps = 4/279 (1%)
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
+A EV + D G N E Y I A+ + + D A ++M G PD I
Sbjct: 398 RAMLEVMS---DKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTI 454
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEA 333
I C + +EA ++ + + LI +L + + + + A+ + +D
Sbjct: 455 IYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLR-NGSWQDAISLANDMVLHG 513
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
I ++ +I++LCR +V + LLS+M +G P N +N +IS K + A+
Sbjct: 514 CSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDAL 573
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
E+ K M ++ L PD+ TY L++G G M A +L + +TY+ LI +
Sbjct: 574 ELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWH 633
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
CK A LLN G+ PN + ++Q+ K+
Sbjct: 634 CKARLLHDASMLLNRAVTSGITPNERTWGIMVQNFVRKS 672
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 76/169 (44%), Gaps = 5/169 (2%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
FS R+LCR+ A T+L M G P ++ +VI A G + A +L M
Sbjct: 175 FSIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMF 234
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G DV T+ ++ G G++ EA +++ + +TY L++G C + +
Sbjct: 235 LMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVE 294
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
A +L + ++ NV +N +I CL + A +L E M KG
Sbjct: 295 EARTMLGRVPEL----NVVLFNTVIGR-CLLDGKLKEAAELYETMGSKG 338
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 8/176 (4%)
Query: 322 ALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMIS-EGPPPGNAVF 376
AL +LD ++A+ P +++V+ + R +L +M+ + PP F
Sbjct: 119 ALHLLDQLP---HRFAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTF 175
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
+ A + G A+ ML+ M G PD Y ++ G + EA +L+E
Sbjct: 176 SIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFL 235
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
T++ ++ G C L A +L++ M G PN Y L++ LCL +
Sbjct: 236 MGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLAS 291
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 70/147 (47%), Gaps = 2/147 (1%)
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG-LKPDVYTYTGLMSGYANGGQMEEACE 429
P +N+V++A+++A T + + + M R + P +T++ G+ +EA
Sbjct: 134 PSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRADEALT 193
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+L ++ V Y T+I C + A LL+EM +G +V+ +N ++ LC
Sbjct: 194 MLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLC 253
Query: 490 LKALDWRTAEKLLEDMRLKGLHLNGIT 516
R A +L++ M ++G N IT
Sbjct: 254 TLG-RLREAARLVDRMMIRGCVPNAIT 279
>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
Length = 698
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 135/296 (45%), Gaps = 10/296 (3%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V N +IA F + G + A ++ + G NQ +Y I R A +
Sbjct: 221 VVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLV 280
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M+ G PD +G +I G+ +A +V E+++ P ++ LIS LC++
Sbjct: 281 EMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKK- 339
Query: 317 ETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
+ A ++L+ E + ++P ++++I R + A+ + M E P
Sbjct: 340 RMLSAAKNLLE----EMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFM-EEKACPD 394
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+N +I Y K G M A+ + MR G PD +TYT L+ GYA G + + +L
Sbjct: 395 IVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLC 454
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ K + + TY +LI GYC + + A L +M+ G+ PNV Y LI SL
Sbjct: 455 DMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSL 510
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 113/279 (40%), Gaps = 2/279 (0%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
GCV Y I+ RR + +M G +P G II W + G +
Sbjct: 111 GCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKV 170
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
+ R + + P + +I++LC+ + A DML+ + F+++I
Sbjct: 171 ESLLGEMRARGLSPNVQIYNTVINALCK-CRSASQASDMLNQMVKSRFNPDVVTFNTMIA 229
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
CR DV A LL + I G P + +I + G+ A ++L M RG P
Sbjct: 230 GFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTP 289
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
D+ T L+ G GQ+ +A + + + Y+ LI G CK A LL
Sbjct: 290 DMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLL 349
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
EM + VQP+ Y LI +++ A K+ E M
Sbjct: 350 EEMLEQKVQPDKFIYTTLIDGF-VRSDKLSDARKIFEFM 387
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 96/186 (51%), Gaps = 6/186 (3%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++ +I CR D+ LL +M ++G P + ++I + GD+T +L MR
Sbjct: 119 YNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMR 178
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEE 458
+RGL P+V Y +++ +A ++LN+ K SR +P VT++T+I G+C+ +
Sbjct: 179 ARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVK--SRFNPDVVTFNTMIAGFCREGD 236
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-R 517
ALKLL E G++PN Y LI C++ + A LL +M +G + IT
Sbjct: 237 VREALKLLREAIRRGLEPNQLSYTPLIHGFCVRG-EAMVASDLLVEMMGRGHTPDMITLG 295
Query: 518 ALIRAV 523
ALI +
Sbjct: 296 ALIHGL 301
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 117/309 (37%), Gaps = 25/309 (8%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
L LI G+ A V K + + + Y I L ++++ A ++ E+M+
Sbjct: 294 LGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEML 353
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
E PD +I F + K +A ++ EK P +I C+ +
Sbjct: 354 EQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKAC-PDIVAYNVMIKGYCKFG-MM 411
Query: 320 KLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
K A+ + RK P +++++ + D+ + LL M+ P
Sbjct: 412 KEAVTCMSSM----RKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFT 467
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+ S+I Y GD A ++ M+S GL P+V YT L+ ++ +A
Sbjct: 468 YASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHML 527
Query: 436 KNHSRLSPVTYHTLIRGY--CK-------------LEEFDCALKLLNEMKDVGVQPNVDE 480
NH + T H L+ G C+ E L + + G+ P +
Sbjct: 528 LNHCPPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISA 587
Query: 481 YNKLIQSLC 489
YN +I SLC
Sbjct: 588 YNAIIFSLC 596
>gi|255660848|gb|ACU25593.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 418
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 134/280 (47%), Gaps = 4/280 (1%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSE--KVGKIISWFCKGGKAKEAHVVYTLAREK 296
I+ + RK D A +V ++ET S+ +I+ + + G ++A + L R+
Sbjct: 36 IQIVVSRKGKDSASAVFAAILETKGAQRSDIYVFSGLITAYLESGFLRDAIECFRLTRKH 95
Query: 297 KMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHG 356
K + P ++ L + + KL + ++ F+ ++ C+ ++
Sbjct: 96 KFWVPFDTCRKVLEHL-MKLKYFKLVWGFYKEILECGYPTSLYFFNILMHRFCKEGEIRL 154
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A+++ + G P FN++I+ Y + GD+ + M + G+ PDVYT T L++
Sbjct: 155 AQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLDKGFRLKTAMHASGVHPDVYTNTVLIN 214
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
G +M+EA E+ NE + VT+ TLI G+CK D AL++ +M G P
Sbjct: 215 GLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSP 274
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++ YN LI LC K D + A L+ +M +KGL + IT
Sbjct: 275 DLITYNTLIYGLCRKG-DLKQARDLIVEMSMKGLKPDKIT 313
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 165/391 (42%), Gaps = 57/391 (14%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L++ + S GK A++ + E ++ + + + LI + + G + A E F
Sbjct: 34 SLIQIVVSRKGKDSASAVFAAILETKGAQRS--DIYVFSGLITAYLESGFLRDAIECFRL 91
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ +T +E L + K F W ++++E G ++ FCK G+
Sbjct: 92 TRKHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPTSLYFFNILMHRFCKEGE 151
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAF----------------------------------- 307
+ A V+ + + P SVV+F
Sbjct: 152 IRLAQSVFDAITKCGLRP--SVVSFNTLINGYIRLGDLDKGFRLKTAMHASGVHPDVYTN 209
Query: 308 --LISSLCQE---DETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAK 358
LI+ LC+E DE +L +MLD + P F+++I C+ V A
Sbjct: 210 TVLINGLCKESKMDEANELFNEMLDK--------GLVPNGVTFTTLIDGHCKSGRVDLAL 261
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+ +M+ +G P +N++I + GD+ A +++ M +GLKPD TYT L+ G
Sbjct: 262 EIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLIDGS 321
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G +E A E+ + RL V Y LI G C+ A K+L EM VG++P
Sbjct: 322 CKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLREMLSVGLKPEN 381
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
Y +I C K D +TA KLL++M+ G
Sbjct: 382 GTYTMIINGFC-KQGDVKTASKLLKEMQRDG 411
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 130/299 (43%), Gaps = 2/299 (0%)
Query: 180 LWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI 239
+W KEI E ++ N L+ F K G+ + A VF+ G + ++ I
Sbjct: 120 VWGFYKEILECGYPT-SLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLI 178
Query: 240 EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
R D + + M +G PD +I+ CK K EA+ ++ +K +
Sbjct: 179 NGYIRLGDLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLV 238
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P LI C+ V LAL++ + + ++++I LCR D+ A+
Sbjct: 239 PNGVTFTTLIDGHCKSGR-VDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARD 297
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
L+ +M +G P + ++I K GD+ A E+ K M ++ D YT L+SG
Sbjct: 298 LIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLC 357
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G+ +A ++L E + TY +I G+CK + A KLL EM+ G P V
Sbjct: 358 QEGRAVDAEKMLREMLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKEMQRDGHVPCV 416
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 4/217 (1%)
Query: 301 PQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
P S+ F L+ C+E E ++LA + D + + ++ F+++I R+ D+
Sbjct: 133 PTSLYFFNILMHRFCKEGE-IRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLDKGF 191
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
L + M + G P +I+ K M A E+ M +GL P+ T+T L+ G+
Sbjct: 192 RLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGH 251
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G+++ A EI + + +TY+TLI G C+ + A L+ EM G++P+
Sbjct: 252 CKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDK 311
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
Y LI C K D TA +L + M + + L+ +
Sbjct: 312 ITYTTLIDGSC-KEGDLETAFELRKRMIEESIRLDDV 347
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 1/208 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K K A E+FN+ D G V N T+ I+ + D A + ++M+ G
Sbjct: 212 LINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQG 271
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD +I C+ G K+A + K + P + LI C+E + ++ A
Sbjct: 272 YSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGD-LETA 330
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++ E+ + ++++I LC+ A+ +L +M+S G P N + +I+
Sbjct: 331 FELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLREMLSVGLKPENGTYTMIING 390
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ K GD+ A ++LK M+ G P V T
Sbjct: 391 FCKQGDVKTASKLLKEMQRDGHVPCVVT 418
>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 755
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 164/363 (45%), Gaps = 20/363 (5%)
Query: 156 VTSGVV--DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKG 213
VT V+ DA +KA C G+ E D++ E+ + T+ N I K G+
Sbjct: 316 VTPDVISYDAAIKA-CGGGGQWETSV--DLLDEMAGRGVAPNTIH-FNSAIVACGKGGQW 371
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
+ A E+ + G + ++ I A ++ + A + ++M PD+
Sbjct: 372 EKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSA 431
Query: 274 ISWFCKGGKAKEAHVVYTLARE-KKMYPPQSVVAFLISS-----LCQEDETVKLALDMLD 327
I KGG+ + +A E ++ P + + +ISS C E + L++L
Sbjct: 432 IEACGKGGQ-------WEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLR 484
Query: 328 DFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG 387
+ + ++S I++ + A LL+KM P + +NS I+A SK G
Sbjct: 485 QMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRG 544
Query: 388 DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYH 447
A+ +L+ M +GL PDV +YT + Y GQ E A E+L + + +TY+
Sbjct: 545 RWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYN 604
Query: 448 TLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRL 507
++I+ + E++ AL LL E+K+ V P++ YN I S C K W A LL +M
Sbjct: 605 SVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAI-SACGKRGRWEEALDLLREMPA 663
Query: 508 KGL 510
+GL
Sbjct: 664 EGL 666
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 147/335 (43%), Gaps = 2/335 (0%)
Query: 182 DIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEA 241
++++EI E+E V N I + + A + + D V ++ +Y I+A
Sbjct: 165 ELLREIPEQEGVSPNVFCYNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKA 224
Query: 242 LSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPP 301
R ++ + +M G PD+ +I+ K G+ KEA V T K + P
Sbjct: 225 CGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLT-P 283
Query: 302 QSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLL 361
+++ + C K A+++L + + + + I++ + LL
Sbjct: 284 ETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLL 343
Query: 362 SKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG 421
+M G P FNS I A K G A+E+L+ + + GL PD ++ ++
Sbjct: 344 DEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKS 403
Query: 422 GQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEY 481
G+ +EA E+L E + ++Y++ I K +++ AL+L +M G+ PNV
Sbjct: 404 GRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISS 463
Query: 482 NKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
N I++ C + W+ +LL M +GL N IT
Sbjct: 464 NIAIRA-CGERGRWQEGLELLRQMPAQGLTPNVIT 497
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 143/330 (43%), Gaps = 4/330 (1%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N I K G+ + A E+ + G N + I A R + + +M
Sbjct: 429 NSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPA 488
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ I KGG+ ++A + +E M P I++ C + K
Sbjct: 489 QGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAA-CSKRGRWK 547
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A+ +L + G+ + +++ I + + A LL +M ++G P +NSVI
Sbjct: 548 EAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVI 607
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
A + G+ A+++LK ++ + PD+ +Y +S G+ EEA ++L E
Sbjct: 608 KACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLT 667
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
++Y + IR E++ AL LLN M GV P Y+ I++ C K A
Sbjct: 668 PDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEA-CGKGGRREEAVC 726
Query: 501 LLEDMRLKGLHLNGITRALIRAVKELEEDA 530
L+ +M +GL I+ +LI V+ L +DA
Sbjct: 727 LVREMAQRGLSHRNISNSLI--VEALGDDA 754
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 143/340 (42%), Gaps = 8/340 (2%)
Query: 190 KEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDY-GCVANQETYYFTIEALSRRKIF 248
KE GV+ I + G+ + A E+ + + G N Y IEA +
Sbjct: 137 KEGGVVCAHSYTTAITTCGRQGQWEKALELLREIPEQEGVSPNVFCYNSAIEACGSGDQW 196
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY--PPQSVVA 306
+ A S+ +M + +PD I +GG+ + V L RE P ++
Sbjct: 197 EIAVSLLREMADREVVPDEISYNSAIKACGRGGQWER---VIGLLREMPSVGLTPDAITY 253
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
+ + C ++ K AL +L + S + ++ IR+ R A +L +M S
Sbjct: 254 NSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMES 313
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
+G P +++ I A G ++++L M RG+ P+ + + GGQ E+
Sbjct: 314 QGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEK 373
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A E+L E ++++ I K + AL+LL EM ++P+ YN I+
Sbjct: 374 AVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIE 433
Query: 487 SLCLKALDWRTAEKLLEDMRLKGLHLNGITRAL-IRAVKE 525
+ C K W A +L M KGL N I+ + IRA E
Sbjct: 434 A-CGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGE 472
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 139/321 (43%), Gaps = 23/321 (7%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N IA +K G+ K A E+ + + +Y IEA + ++ A + +M
Sbjct: 393 FNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMP 452
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS-----SLCQ 314
G P+ I + G+ +E + + P Q + +I+ C
Sbjct: 453 TKGLTPNVISSNIAIRACGERGRWQEGLELL------RQMPAQGLTPNVITYNSAIKTCG 506
Query: 315 EDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
+ + ALD+L ++ A+ P ++S I + + A LL +M +G
Sbjct: 507 KGGQWEKALDLLAKM----KELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLT 562
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P + + I AY K G A+E+L+ M ++GL P+V TY ++ GG+ E+A ++
Sbjct: 563 PDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDL 622
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
L E K+ ++Y+ I K ++ AL LL EM G+ P+V Y I++ C
Sbjct: 623 LKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRA-CN 681
Query: 491 KALDWRTAEKLLEDMRLKGLH 511
+W EK L + L G H
Sbjct: 682 AEGEW---EKALGLLNLMGAH 699
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 161/362 (44%), Gaps = 4/362 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ LLK C +E L ++ + G+ + N +I F G+ A+ +F
Sbjct: 170 NTLLKGFCDENRAEEALELLHMMAD-GQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFL 228
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
D G N TY I+ L + ++ D A V ++MI+ G P+ +I + G
Sbjct: 229 DMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIG 288
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ KE + + P L+ LC++ + + A + D + K + +
Sbjct: 289 QWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTE-ARKLFDSMIRKGIKPDVSIY 347
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
++ + + L M+ G P + +FN V A++K + AM++ MR
Sbjct: 348 GIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQ 407
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
+GL P+V Y L+ G++++A N+ + V + +L+ G C +++++
Sbjct: 408 QGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEK 467
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALI 520
A +L EM + G+ PNV +N ++ +LC + + A++L++ M G + I+ ALI
Sbjct: 468 AGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMK-AQRLIDLMERVGTRPDIISYNALI 526
Query: 521 RA 522
R
Sbjct: 527 RG 528
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 132/287 (45%), Gaps = 1/287 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + +G+ K + + +G + TY ++ L ++ A + + MI G
Sbjct: 280 LIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKG 339
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD G I+ + G E H L + P + + + ++ + A
Sbjct: 340 IKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKK-AMIGEA 398
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+D+ + + + ++++I +LC++ V A+ ++MI+EG P VF S++
Sbjct: 399 MDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYG 458
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
A E+ M ++G+ P+V + +M G++ +A +++ ++ +R
Sbjct: 459 LCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPD 518
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
++Y+ LIRG+C + + D A KLL+ M VG++PN YN L+ C
Sbjct: 519 IISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYC 565
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 133/311 (42%), Gaps = 10/311 (3%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
L+ K GK A ++F+ G + Y + + + S + M+ G
Sbjct: 315 LLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNG 374
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ----EDET 318
P+ + F K EA ++ R++ + P A LI +LC+ +D
Sbjct: 375 ISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAE 434
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+K + E I F+S++ LC + A L +M+++G P FN+
Sbjct: 435 LKF-----NQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNT 489
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
++ G + A ++ LM G +PD+ +Y L+ G+ G+ +EA ++L+
Sbjct: 490 IMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVG 549
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
+ + TY+TL+ GYC+ D A + EM G+ P V YN ++ L K + A
Sbjct: 550 LKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGL-FKTRRFSEA 608
Query: 499 EKLLEDMRLKG 509
++L +M G
Sbjct: 609 KELYLNMITSG 619
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 121/283 (42%), Gaps = 17/283 (6%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G N + A +++ + A + KM + G P+ +I CK G+ +A
Sbjct: 374 GISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDA 433
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
+ + + + P V L+ LC D+ K A ++ + + + F++++
Sbjct: 434 ELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEK-AGELFFEMVNQGIHPNVVFFNTIMC 492
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
+LC V A+ L+ M G P +N++I + G A ++L +M S GLKP
Sbjct: 493 NLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKP 552
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
+ TY L+ GY G++++A + E N VTY+T++ G K F A +L
Sbjct: 553 NECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELY 612
Query: 467 NEMKDVGVQPNVDEYN----------------KLIQSLCLKAL 493
M G Q ++ YN K+ QSLC K L
Sbjct: 613 LNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDL 655
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 143/334 (42%), Gaps = 3/334 (0%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
I N + F+K A ++FNK G N Y I+AL + D A +M
Sbjct: 381 IFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQM 440
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
I G P+ ++ C K ++A ++ + ++P ++ +LC E
Sbjct: 441 INEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRV 500
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+K A ++D + I ++++IR C + A LL M+S G P +N+
Sbjct: 501 MK-AQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNT 559
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
++ Y + G + A + + M S G+ P V TY ++ G + EA E+ +
Sbjct: 560 LLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSG 619
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
+ S TY+ ++ G K D ALK+ + +Q ++ +N +I +L LK A
Sbjct: 620 KQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGAL-LKDGRKEDA 678
Query: 499 EKLLEDMRLKGLHLNGITRALIRAVKELEEDAIE 532
L + GL + T LI A +EE ++E
Sbjct: 679 MNLFATISANGLVPDVTTYRLI-AENLIEEGSLE 711
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 123/275 (44%), Gaps = 6/275 (2%)
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEA-HVVYTLAREKKMYPPQSVVAF--LISSL 312
+M E G P+ ++ FC +A+EA +++ +A + P ++V++ +I+
Sbjct: 155 RRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGF 214
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
E + K A ++ D + + + ++ VI LC+ + V A+ + +MI +G P
Sbjct: 215 FTEGQVDK-AYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPN 273
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+ +I Y G + MLK M + GL+PD +TY L+ G+ EA ++ +
Sbjct: 274 IVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFD 333
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
+ + Y ++ GY L+ M G+ PN +N + + KA
Sbjct: 334 SMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKA 393
Query: 493 LDWRTAEKLLEDMRLKGLHLNGITRA-LIRAVKEL 526
+ A + MR +GL N + A LI A+ +L
Sbjct: 394 MIGE-AMDIFNKMRQQGLSPNVVNYATLIDALCKL 427
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 99/225 (44%), Gaps = 7/225 (3%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQED---ETVKLALDMLD 327
++ C + EA V L R ++ +VV++ L+ C E+ E ++L L M+
Sbjct: 136 LLKGLCDAKRVGEAMGVL-LRRMSELGCTPNVVSYNTLLKGFCDENRAEEALEL-LHMMA 193
Query: 328 DFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG 387
D + + +++VI V A L M +G PP + VI KA
Sbjct: 194 DGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQ 253
Query: 388 DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYH 447
+ A + + M +G++P++ TYT L+ GY + GQ +E +L E + TY
Sbjct: 254 VVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYG 313
Query: 448 TLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
L+ CK + A KL + M G++P+V Y ++ K
Sbjct: 314 LLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKG 358
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 87/206 (42%), Gaps = 7/206 (3%)
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
D A + + M+ G P+ ++ +C+ G+ +A+ V+ + P +
Sbjct: 536 DEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTI 595
Query: 309 ISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI 365
+ L + E +L L+M+ ++++I ++ ++ L + V A + +
Sbjct: 596 LHGLFKTRRFSEAKELYLNMIT----SGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLC 651
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
S+ FN +I A K G AM + + + GL PDV TY + G +E
Sbjct: 652 SKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLE 711
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIR 451
E + +E +K+ + + + L+R
Sbjct: 712 EFDGMFSEMEKSGCAPNSLMLNFLVR 737
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEA-KKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
PDV+TY+ L+ + G++E K V + L++G C + A+
Sbjct: 92 PDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEAMG 151
Query: 465 -LLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRL 507
LL M ++G PNV YN L++ C D AE+ LE + +
Sbjct: 152 VLLRRMSELGCTPNVVSYNTLLKGFC----DENRAEEALELLHM 191
>gi|302795973|ref|XP_002979749.1| hypothetical protein SELMODRAFT_111428 [Selaginella moellendorffii]
gi|300152509|gb|EFJ19151.1| hypothetical protein SELMODRAFT_111428 [Selaginella moellendorffii]
Length = 388
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 145/334 (43%), Gaps = 47/334 (14%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
V I N ++ F++ G A GC ++ TY I+ + + FD A +
Sbjct: 10 NVVIFNSVVNGFARAGHLDGALGTLRMMRKAGCNPDEVTYNTLIDVFHKLERFDSARELL 69
Query: 256 EKMIETGSLPD--SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC 313
E+M ++G P +E +I+ FC+ ++A + L + P LIS LC
Sbjct: 70 EQMWDSGIRPGVMAETYNNVIASFCEVCNVRKAKGILELMIDSGCKPDVVTYNTLISGLC 129
Query: 314 ---QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
+ D+ ++L +M E I +++VI L R + A+ LL +MIS G P
Sbjct: 130 KLRRADDALQLMREM------EPAPNTIT-YNTVINGLWRSRKDTEAQALLDEMISVGCP 182
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR---------------------------- 402
+ +N VI+ ++ +M A+++ MR +
Sbjct: 183 FSVSTYNCVIANLCRSREMEKAVDVFLYMRKKKCEADEVTFATLVDGFLRDKRLEDAGGT 242
Query: 403 -------GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
G+ DV +YT L++ + G ++ACEI N + V+Y+ L++G CK
Sbjct: 243 LDWMARAGIPSDVKSYTKLLNALCDRGSAQKACEIFNLMVDRGYAPTLVSYNVLLKGLCK 302
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ AL L EM++ +QP+V Y +I+ LC
Sbjct: 303 ALRVEHALVLFREMQEREIQPDVVSYTTVIKGLC 336
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 71/167 (42%), Gaps = 1/167 (0%)
Query: 195 LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSV 254
+V N +IA + + + A +VF C A++ T+ ++ R K + A
Sbjct: 183 FSVSTYNCVIANLCRSREMEKAVDVFLYMRKKKCEADEVTFATLVDGFLRDKRLEDAGGT 242
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
+ M G D + K+++ C G A++A ++ L ++ P L+ LC+
Sbjct: 243 LDWMARAGIPSDVKSYTKLLNALCDRGSAQKACEIFNLMVDRGYAPTLVSYNVLLKGLCK 302
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLL 361
V+ AL + + + + +++VI+ LC + + A L
Sbjct: 303 ALR-VEHALVLFREMQEREIQPDVVSYTTVIKGLCAARRIDEAIDLF 348
>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
Length = 796
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 135/307 (43%), Gaps = 2/307 (0%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
++ I K GK + A E++ + G N T I L + A V + M
Sbjct: 424 LMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAM 483
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+ +G D +I CK K EA + ++ P + + C +
Sbjct: 484 VNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGK- 542
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
V+ L +LD E K I + ++I C+ KD+H A L++++ G P ++N+
Sbjct: 543 VEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNA 602
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I Y + G+++ A+ +L M+ G++P TY LM + G +EE + +
Sbjct: 603 LIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKD 662
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
L + Y +I+G+CK+ + D A+ EM G+ PN Y L+ + K+ + A
Sbjct: 663 IELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYS-KSGNKEEA 721
Query: 499 EKLLEDM 505
KL ++M
Sbjct: 722 SKLFDEM 728
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 172/371 (46%), Gaps = 26/371 (7%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVL-TVEILNELIALFSKLGKGKAAFEVFN 221
A++KA+C + E+ A + ++ E+ + G+ TV N L+ K G+ + AF +
Sbjct: 216 AMIKALCRA---GEIDAAFAMLAEL--RRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKG 270
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ + + T+ I L+R + F +V ++M G P+ ++I W C+ G
Sbjct: 271 RMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKG 330
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
EA ++ K + Q+VV + + +LC+E E ++ A +LD+
Sbjct: 331 HCSEALKLFDEMVSKGI--KQTVVTYNLIAKALCKEGE-MEHAEKILDEMLLAGMMVHCS 387
Query: 340 PFSSVI----RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
F+SV+ R R+ V L+ +M++ P +A+ + I K+G A E+
Sbjct: 388 LFNSVVAWHLRGTGRLDLV---LRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEI 444
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
+ +GL +V T L+ G G M+EA ++L + L +TY+ +I+G CK
Sbjct: 445 WFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCK 504
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC--------LKALDWRTAEKLLEDMRL 507
+ D A++L ++M G +P++ +N + + C L LD +E L D+
Sbjct: 505 ASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVT 564
Query: 508 KGLHLNGITRA 518
G ++G +A
Sbjct: 565 YGTIIDGYCKA 575
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 109/218 (50%), Gaps = 16/218 (7%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+ ++++I++LCR ++ A +L+++ G P +N ++ A K+G + A +
Sbjct: 211 VHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKG 270
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M ++P + T+ L+SG A G Q E +L E + + V Y+ +I +C+
Sbjct: 271 RMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKG 330
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL------- 510
ALKL +EM G++ V YN + ++LC K + AEK+L++M L G+
Sbjct: 331 HCSEALKLFDEMVSKGIKQTVVTYNLIAKALC-KEGEMEHAEKILDEMLLAGMMVHCSLF 389
Query: 511 ------HLNGITR--ALIRAVKELEEDAIENGEALVEA 540
HL G R ++R ++E+ ++ +AL+ A
Sbjct: 390 NSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTA 427
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 154/395 (38%), Gaps = 55/395 (13%)
Query: 133 DFVLKVLETPLVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEK 192
D VL+++ E L F K ++ A ++ +C S +E +W ++ K
Sbjct: 404 DLVLRLIR------EMLARFLK-PNDALMTACIQELCKSGKHEEAAEIW---FQVLGKGL 453
Query: 193 GVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAW 252
GV V N LI + K A +V + G ++ TY I+ + D A
Sbjct: 454 GV-NVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAI 512
Query: 253 SVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSL 312
+ + MI+ G PD + +C GK +E + + + + P +I
Sbjct: 513 QLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGY 572
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEG 368
C+ + K +++ E K ++P ++++I R ++ A +L M G
Sbjct: 573 CKAKDMHKA-----NEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNG 627
Query: 369 PPPGNAVFNS-----------------------------------VISAYSKAGDMTPAM 393
P +NS +I + K G + A+
Sbjct: 628 IQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAV 687
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
K M SRG+ P+ TYT LM Y+ G EEA ++ +E V+Y+TLI G+
Sbjct: 688 MYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGF 747
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
C+++ D ++ EM ++ + YN + +
Sbjct: 748 CEVDSLDKMVESPAEMSSQVLKQDGCSYNAFVDGI 782
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 3/219 (1%)
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI-SEGPPPGNAVFNSVI 380
A D + S +IK S ++ +L + A+ + +M + P + ++I
Sbjct: 159 AADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMI 218
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
A +AG++ A ML +R G++P V TY LM G++EEA + + R
Sbjct: 219 KALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVR 278
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
S VT+ LI G + ++F +L EM+ G+ PN YN++I C K A K
Sbjct: 279 PSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKG-HCSEALK 337
Query: 501 LLEDMRLKGLHLNGITRALIRAVKELEEDAIENGEALVE 539
L ++M KG+ +T LI A +E +E+ E +++
Sbjct: 338 LFDEMVSKGIKQTVVTYNLI-AKALCKEGEMEHAEKILD 375
>gi|410109873|gb|AFV61016.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
citrodora]
Length = 380
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 138/280 (49%), Gaps = 4/280 (1%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSE--KVGKIISWFCKGGKAKEAHVVYTLAREK 296
I+ + RK A +V ++ET S+ +I+ + + G ++A Y L RE
Sbjct: 34 IQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREH 93
Query: 297 KMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHG 356
K + P ++ L + + KL + ++ F+ +++ C+ D+
Sbjct: 94 KFWVPLDTCRKVLEHL-MKLKYFKLVWGFYKEILECGYPASLYFFNILMQRFCKEGDIRV 152
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A+ +L+ + G P FN++I+ Y + GD+ + M + G++PDVYTY+ L++
Sbjct: 153 AQLVLNAITKWGLRPSVVSFNTLINGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLIN 212
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
G +M++A E+ +E + VT+ TLI G+CK D A+++ +M + P
Sbjct: 213 GLCKESKMDDANELFDEMLDKGMVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSP 272
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++ YN LI LC K + + A L+++M ++GL + IT
Sbjct: 273 DLITYNTLIYGLCKKG-ELKQAHDLIDEMSMEGLKPDKIT 311
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 162/358 (45%), Gaps = 18/358 (5%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L++ + S GK A++ + E ++ + + + LI + + G + A E +
Sbjct: 32 SLIQVVVSRKGKGSASAVFAAILETKGTQRS--DIYVFSGLITAYLESGFLRDAIECYRL 89
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
++ +T +E L + K F W ++++E G ++ FCK G
Sbjct: 90 TREHKFWVPLDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMQRFCKEGD 149
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAF--LISS---LCQEDETVKLALDMLDDFSGEARKYA 337
+ A +V + + P SVV+F LI+ L DE +L M +
Sbjct: 150 IRVAQLVLNAITKWGLRP--SVVSFNTLINGYIRLGDLDEGFRLKSAM----HASGVQPD 203
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+ +S +I LC+ + A L +M+ +G P F ++I + K G + AME+ K
Sbjct: 204 VYTYSVLINGLCKESKMDDANELFDEMLDKGMVPNGVTFTTLIDGHCKNGRVDLAMEIYK 263
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M S+ L PD+ TY L+ G G++++A ++++E + +TY TLI G CK
Sbjct: 264 QMLSQSLSPDLITYNTLIYGLCKKGELKQAHDLIDEMSMEGLKPDKITYTTLIDGCCKEG 323
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL--KALDWRTAEKLLEDMRLKGLHLN 513
+ + A + M ++ + Y LI LC +++D AEK+L +M GL N
Sbjct: 324 DMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVD---AEKMLREMLSVGLKPN 378
>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 192/412 (46%), Gaps = 15/412 (3%)
Query: 116 DGYLESSLDSFELDL--HED--FVLKVLETPLVLGENLVCF-FKWVTSGVVD---ALLKA 167
D L++ L +FE L ED F+L+ L + + CF F V G + L A
Sbjct: 133 DASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFALVREGRKNERGKLASA 192
Query: 168 ICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYG 227
+ S++G+ L V E E TV + LI+ + K G A +VF G
Sbjct: 193 MISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSG 252
Query: 228 CVANQETYYFTIEALSRRKI-FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
N TY I+A + + F + E+M+ G PD +++ +GG + A
Sbjct: 253 LKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAA 312
Query: 287 HVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSV 344
++ ++ + Q V + L+ ++C+ + + LA +++ + G+ + +S++
Sbjct: 313 RNLFNEMIDRGI--DQDVFTYNTLLDAVCKGGQ-MDLAYEIMLEMPGKKILPNVVTYSTM 369
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
+ + A L ++M G +N+++S Y+K G A+++ K M S G+
Sbjct: 370 ADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGV 429
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
K DV TY L+ GY G+ E + E KK+ + +TY TLI Y K ++ A++
Sbjct: 430 KKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAME 489
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ E K G++ +V Y++LI +LC L +A LL++M +G+ N +T
Sbjct: 490 VFREFKQAGLKADVVLYSELINALCKNGL-VDSAVLLLDEMTKEGIRPNVVT 540
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 148/332 (44%), Gaps = 29/332 (8%)
Query: 133 DFVLKVLETPLVLG--ENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEK 190
D +KV E+ V G NLV + + V+DA K G E + +I +E+
Sbjct: 239 DEAIKVFESMKVSGLKPNLVTY-----NAVIDACGK------GGVEFKRVVEIFEEM--L 285
Query: 191 EKGVLTVEI-LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
GV I N L+A+ S+ G +AA +FN+ D G + TY ++A+ + D
Sbjct: 286 RNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMD 345
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYT------LAREKKMYPPQS 303
A+ + +M LP+ + + K G+ ++A +Y + ++ Y +
Sbjct: 346 LAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSY---N 402
Query: 304 VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSK 363
+ + + L + ++ +K+ +M K + +++++ + + + +
Sbjct: 403 TLLSIYAKLGRFEDALKVCKEM----GSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKE 458
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
M + P ++++I YSK AME+ + + GLK DV Y+ L++ G
Sbjct: 459 MKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGL 518
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
++ A +L+E K R + VTY+++I + +
Sbjct: 519 VDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGR 550
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/367 (20%), Positives = 160/367 (43%), Gaps = 19/367 (5%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ LL A+C G+ ++ ++I+ E+ K K + V + + ++K G+ + A ++N
Sbjct: 332 NTLLDAVCKG-GQMDL--AYEIMLEMPGK-KILPNVVTYSTMADGYAKAGRLEDALNLYN 387
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ G ++ +Y + ++ F+ A VC++M +G D ++ + K G
Sbjct: 388 EMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQG 447
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
K E V+ ++ +++P + LI + + + A+++ +F K + +
Sbjct: 448 KFNEVTRVFKEMKKDRVFPNLLTYSTLID-VYSKGSLYEEAMEVFREFKQAGLKADVVLY 506
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
S +I +LC+ V A LL +M EG P +NS+I A+ ++ ++ +
Sbjct: 507 SELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFLVDGVGASNE 566
Query: 402 RGLK-PDVYTYTGLMSGYAN--GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
R + P G+ N G + + + L K+ P L + EE
Sbjct: 567 RQSESPSFMLIEGVDESEINWDDGHVFKFYQQLVSEKE-----GPAKKERLGK-----EE 616
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRA 518
L + +M ++ ++PNV ++ ++ + C + A LLE++RL + G+
Sbjct: 617 IRSILSVFKKMHELEIKPNVVTFSAILNA-CSRCKSIEDASMLLEELRLFDNQVYGVAHG 675
Query: 519 LIRAVKE 525
L+ E
Sbjct: 676 LLMGFSE 682
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 156/369 (42%), Gaps = 56/369 (15%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+++++KLG+ + A +V + G G + TY ++ ++ F+ V ++M +
Sbjct: 402 NTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKK 461
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
P+ +I + KG +EA V+ ++ + + + LI++LC+ + V
Sbjct: 462 DRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCK-NGLVD 520
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCR------MKDVHGAKTLL-----SKMISEGP 369
A+ +LD+ + E + + ++S+I + R + D GA S M+ EG
Sbjct: 521 SAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFLVDGVGASNERQSESPSFMLIEGV 580
Query: 370 PPGNAVFNS--VISAYS-----KAG----------DMTPAMEMLKLMRSRGLKPDVYTYT 412
++ V Y K G ++ + + K M +KP+V T++
Sbjct: 581 DESEINWDDGHVFKFYQQLVSEKEGPAKKERLGKEEIRSILSVFKKMHELEIKPNVVTFS 640
Query: 413 GLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
+++ + +E+A +L E + +++ V H L+ G+ + + A L +E+K +
Sbjct: 641 AILNACSRCKSIEDASMLLEELRLFDNQVYGVA-HGLLMGFSE-NVWIQAQYLFDEVKQM 698
Query: 473 GVQPNVDEYNKLIQSLCLKALDWRTAEK------LLEDMRLK-----------GLHL--N 513
YN L L W +K +LE R K LHL +
Sbjct: 699 DSSTASAFYNALTDML------WHFGQKRGAQLVVLEGKRRKVWETLWSDSCLDLHLMSS 752
Query: 514 GITRALIRA 522
G RA++ A
Sbjct: 753 GAARAMVHA 761
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 53/112 (47%)
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
+ ++S G++E A + A + + LI Y K FD A+K+ MK
Sbjct: 191 SAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKV 250
Query: 472 VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRAV 523
G++PN+ YN +I + ++++ ++ E+M G+ + IT + AV
Sbjct: 251 SGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAV 302
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 134/288 (46%), Gaps = 1/288 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I K G AFE+ G + +Y + AL + ++ + KM
Sbjct: 267 NTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 326
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
P+ +I+ C+ GK +EA + L +EK + P LI++ C+E +
Sbjct: 327 EKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGR-LD 385
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
+A++ L+ + I +++V+ +LC+ A + K+ G P ++ +N++
Sbjct: 386 VAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMF 445
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
SA +GD A+ M+ M S G+ PD TY ++S G ++EA E+L + +
Sbjct: 446 SALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFH 505
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
S VTY+ ++ G+CK + A+ +L M G +PN Y LI+ +
Sbjct: 506 PSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 143/329 (43%), Gaps = 14/329 (4%)
Query: 184 VKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALS 243
V EI EK G V N LI F K+ + A V ++ + TY I +L
Sbjct: 146 VMEILEK-FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLC 204
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS 303
R D A V +++ P +I G EA + + + P
Sbjct: 205 SRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMF 264
Query: 304 VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSK 363
+I +C+E V A +M+ + + + + ++ ++R+L + L++K
Sbjct: 265 TYNTIIRGMCKEG-MVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTK 323
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
M SE P ++ +I+ + G + AM +LKLM+ +GL PD Y+Y L++ + G+
Sbjct: 324 MFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGR 383
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
++ A E L + V Y+T++ CK + D AL++ ++ +VG PN YN
Sbjct: 384 LDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNT 443
Query: 484 LIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
+ +L W + +K ++ LH+
Sbjct: 444 MFSAL------WSSGDK------IRALHM 460
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 145/344 (42%), Gaps = 11/344 (3%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I GK A +V N+ C TY IEA D A + ++M+
Sbjct: 197 NIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS 256
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DE 317
G PD II CK G A + K P L+ +L + +E
Sbjct: 257 RGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEE 316
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
KL M FS + + +S +I +LCR + A LL M +G P ++
Sbjct: 317 GEKLMTKM---FSEKCDPNVVT-YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYD 372
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+I+A+ + G + A+E L+ M S G PD+ Y +++ G+ ++A EI + +
Sbjct: 373 PLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEV 432
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
+ +Y+T+ + AL ++ EM G+ P+ YN +I LC + +
Sbjct: 433 GCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGM-VDE 491
Query: 498 AEKLLEDMRLKGLHLNGITRALIR---AVKELEEDAIENGEALV 538
A +LL DMR H + +T ++ EDAI E++V
Sbjct: 492 AFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMV 535
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 137/327 (41%), Gaps = 5/327 (1%)
Query: 194 VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWS 253
V+T IL E L G A ++ ++ G + TY I + + + D A+
Sbjct: 228 VITYTILIEATML---EGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFE 284
Query: 254 VCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC 313
+ + GS PD ++ GK +E + T +K P + LI++LC
Sbjct: 285 MVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLC 344
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
+ D ++ A+++L + + +I + CR + A L MIS+G P
Sbjct: 345 R-DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 403
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+N+V++ K G A+E+ + G P+ +Y + S + G A ++ E
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
N +TY+++I C+ D A +LL +M+ P+V YN ++ C KA
Sbjct: 464 MMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFC-KAH 522
Query: 494 DWRTAEKLLEDMRLKGLHLNGITRALI 520
A +LE M G N T ++
Sbjct: 523 RIEDAINVLESMVGNGCRPNETTYTVL 549
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 161/358 (44%), Gaps = 17/358 (4%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
L+K +S K+ + +I++ G+ + V N +I+ FSK + +A +VF++
Sbjct: 103 LIKGFFNSRNLKKAMRVMEILETYGDPD-----VYSYNAMISGFSKANQIDSANQVFDRM 157
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
G + TY I +L R + A+ V +++++ G P +I G+
Sbjct: 158 RSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRI 217
Query: 284 KEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSS 343
EA ++ + + P +I +C+E + ALD + S + ++
Sbjct: 218 NEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDR-ALDFVRHLSARGCNPDVVSYNI 276
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
++RS + L+ M+ G P + +IS++ + G + A+ +L++M+ +G
Sbjct: 277 LLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKG 336
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
L PD Y+Y L+S + G+++ A E L + + V Y+T++ CK D AL
Sbjct: 337 LTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLAL 396
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK-----LLEDMRLKGLHLNGIT 516
+ ++ +VG P V YN + +L W K ++ +M KG+ + IT
Sbjct: 397 DVFEKLDEVGCPPTVRAYNTMFSAL------WSCGNKIKALEMISEMIRKGIDPDEIT 448
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 135/296 (45%), Gaps = 3/296 (1%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I K G A + GC + +Y + + + ++ + + M+
Sbjct: 240 NAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVL 299
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
+G P+ +IS FC+ G+ +EA V + +EK + P LIS+ C+E +
Sbjct: 300 SGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGR-LD 358
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
LA++ L+ + I +++++ +LC+ A + K+ G PP +N++
Sbjct: 359 LAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMF 418
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
SA G+ A+EM+ M +G+ PD TY L+S G ++EA +L + + +
Sbjct: 419 SALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQ 478
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ ++++ ++ G CK ++LL M + G PN Y LI+ + WR
Sbjct: 479 PTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAG--WR 532
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 113/251 (45%), Gaps = 7/251 (2%)
Query: 272 KIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL--ALDMLDDF 329
K+++ C+ GK E+ K P + LI K +++L+ +
Sbjct: 67 KLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETY 126
Query: 330 SGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
G+ Y+ ++++I + + A + +M S G P +N +I + G +
Sbjct: 127 -GDPDVYS---YNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKL 182
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
A E++ + G KP V TYT L+ G++ EA E+ +E R TY+ +
Sbjct: 183 ELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAI 242
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
IRG CK D AL + + G P+V YN L++S K+ W E+L++DM L G
Sbjct: 243 IRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKS-RWEDGERLMKDMVLSG 301
Query: 510 LHLNGITRALI 520
N +T +++
Sbjct: 302 CEPNVVTHSIL 312
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 142/328 (43%), Gaps = 44/328 (13%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+A+F + G VF + G + ++TY I + SR +FD A + ++M+E
Sbjct: 422 NTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMME 481
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD ++S +GG+ ++A ++ E+ P + + SSL K
Sbjct: 482 AGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDE----YSYSSLLHAYANAK 537
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLC------------------------------- 349
LD + S + I+P + ++++L
Sbjct: 538 -RLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVL 596
Query: 350 -RMKDVHG-------AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
M ++G + +LS M A +NS++ YS+ GD +L ++S
Sbjct: 597 NAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKS 656
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G++PD Y+Y ++ Y GQM+EA + +E K + + VTY+ ++ Y F+
Sbjct: 657 SGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEE 716
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A++L+ M G +PN YN +++ C
Sbjct: 717 AIELVRYMVTQGCKPNERTYNSIVEGYC 744
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 123/294 (41%), Gaps = 39/294 (13%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSV--CEKMIE 260
L++ FS+ G+ + A VF + D G TY + S+ + W V M E
Sbjct: 178 LVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAV-PWKEVVELVASMKE 236
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD +IS + KEA V+ + P K
Sbjct: 237 HGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPD------------------K 278
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
+ + L D G+AR++ A ++ +M G PP +NS+I
Sbjct: 279 VTFNSLLDVYGKARRH------------------DEAIEVIQEMERVGCPPSVVTYNSLI 320
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
S+Y K G + A+ + + M +G+KPDV TYT L+SG G+++ A +E +N +
Sbjct: 321 SSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCK 380
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
+ TY+ LI+ + +F + + +E + G P++ +N L+ LD
Sbjct: 381 PNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLD 434
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 129/280 (46%), Gaps = 4/280 (1%)
Query: 179 ALWDIVKEIGEK--EKGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETY 235
L+D+ +I ++ E G+ V N +++ ++ G+ + A ++F + + C ++ +Y
Sbjct: 467 GLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSY 526
Query: 236 YFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE 295
+ A + K D ++ + + P + V ++ K EA + R+
Sbjct: 527 SSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQ 586
Query: 296 KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVH 355
K+ +V+ ++S + ++ V+ +L A + ++S++ R+ D
Sbjct: 587 KRCSLDINVLNAMVS-IYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCE 645
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
+ +L+++ S G P +N+VI AY + G M A + M+ GLKPDV TY +
Sbjct: 646 KCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFV 705
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
Y + EEA E++ + + TY++++ GYC+
Sbjct: 706 KSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCR 745
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 149/355 (41%), Gaps = 38/355 (10%)
Query: 175 KEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQET 234
KE ++D +K G + V N L+ ++ K + A EV + GC + T
Sbjct: 260 KEAAQVFDEMKASGFEPDKV----TFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVT 315
Query: 235 YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR 294
Y I + + + + A ++ ++M G PD +IS + GK A V Y
Sbjct: 316 YNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMV 375
Query: 295 EKKMYPPQSVVAFLISSLCQEDETVKL---------ALDMLDDFSGEARKYAIKPFSSVI 345
P +LC + +K+ + + D+F R P
Sbjct: 376 RNGCKP----------NLCTYNALIKMHGVRGKFPEMMAVFDEF----RSAGFVPDIVTW 421
Query: 346 RSLCRMKDVHGAKTLLSKMISE----GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+L + +G + +S + E G P + S+IS+YS+ G AM++ K M
Sbjct: 422 NTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMME 481
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+ PDV TY ++S A GG+ E+A ++ E ++ + +Y +L+ Y + D
Sbjct: 482 AGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDK 541
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCL---KALDWRTAEKLLEDMRLKGLHLN 513
L +++ ++P +N L+++L L K + AEK ++R K L+
Sbjct: 542 MKALSDDIYSERIEP----HNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLD 592
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 97/225 (43%), Gaps = 41/225 (18%)
Query: 328 DFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG 387
+ GE + + ++ IR + R + A LL P P + +++SA+S+AG
Sbjct: 131 ELHGEGVLHHPRVLATAIRVMARAGRLAEASALLDA----APGPDAGAYTALVSAFSRAG 186
Query: 388 ---------------DMTPAM---------------------EMLKLMRSRGLKPDVYTY 411
+ PA+ E++ M+ G+ PD YTY
Sbjct: 187 RFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTY 246
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
L+S +EA ++ +E K + VT+++L+ Y K D A++++ EM+
Sbjct: 247 NTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMER 306
Query: 472 VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
VG P+V YN LI S L A L ++M +KG+ + +T
Sbjct: 307 VGCPPSVVTYNSLISSYVKDGL-LEQAVALKQEMEVKGMKPDVVT 350
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 66/165 (40%), Gaps = 4/165 (2%)
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
R+L + D G T ++S P P A + + + G A+ + + G+
Sbjct: 79 RALLALLDDPGRATSPRDLLSGLPAPELAAVVGALGSRGQPGAALAALHAARELHGEGVL 138
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
+ A G++ EA +L+ A + Y L+ + + F A+ +
Sbjct: 139 HHPRVLATAIRVMARAGRLAEASALLDAAPGPDAG----AYTALVSAFSRAGRFRDAVAV 194
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
M D GVQP + YN ++ A+ W+ +L+ M+ G+
Sbjct: 195 FRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGV 239
>gi|302813417|ref|XP_002988394.1| hypothetical protein SELMODRAFT_128001 [Selaginella moellendorffii]
gi|300143796|gb|EFJ10484.1| hypothetical protein SELMODRAFT_128001 [Selaginella moellendorffii]
Length = 388
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 145/333 (43%), Gaps = 47/333 (14%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V I N ++ F++ G A GC ++ TY I+ + + FD A + E
Sbjct: 11 VVIFNSVVNGFARAGHLDGALGTLRMMRKAGCDPDEVTYNTLIDVFHKLERFDSARELLE 70
Query: 257 KMIETGSLPD--SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC- 313
+M ++G P +E +I+ FC+ ++A + L + P LIS LC
Sbjct: 71 QMWDSGIRPGVMAETYNNVIASFCEVCNVRKAKGILELMIDSGCKPDVVTYNTLISGLCK 130
Query: 314 --QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
+ D+ ++L +M E I +++VI L R + A+ LL +MIS G P
Sbjct: 131 VRRADDALQLMREM------EPAPNTIT-YNTVINGLWRSRKDTEAQALLDEMISVGCPF 183
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSR----------------------------- 402
+ +N VI+ ++ +M A+++ MR +
Sbjct: 184 SVSTYNCVIANLCRSREMEKAVDVFLYMRKKKCETDEVTFATLVDGFLRDKRLEDAGGTL 243
Query: 403 ------GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
G+ DV +YT L++ + G ++ACEI N + V+Y+ L++G CK
Sbjct: 244 DWMARAGIPSDVKSYTKLLNALCDRGSAQKACEIFNLMVDRGYAPTLVSYNVLLKGLCKA 303
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ AL L EM++ +QP+V Y +I+ LC
Sbjct: 304 LRVEHALVLFREMQEREIQPDVVSYTTVIKGLC 336
>gi|255586858|ref|XP_002534039.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223525946|gb|EEF28343.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 115/474 (24%), Positives = 195/474 (41%), Gaps = 35/474 (7%)
Query: 69 FSSRSFGENEYAQMDPSADAVESKEEEAYEIDGDKLENVLS--LLQSSVDGYLESSLDSF 126
FS +++ Q+D S + +E EE+ + ++ N++ + QS VD ++
Sbjct: 47 FSILVLSFSKWGQVDKSFEFIEKMEEQNFRLNEKTFCNLIHGFVKQSRVDKGVQLFYKMQ 106
Query: 127 ELDLHEDFVL-----------KVLETPLVLGENLVCFFKWVTSGVVDALLKAICSSVGKK 175
+ L D L K L+ L L + GVV L+ +
Sbjct: 107 KYGLSPDISLYDVLIGGFCSNKKLDKALSLYAEMKMLKIQPDIGVVSKLISSF------P 160
Query: 176 EVYALWDIVKEIGE----KEKGVLTVEILNELI----------ALFSKLGKGKAAFEVFN 221
E L DI++E E + + +L +L+ L+ L + +G G +
Sbjct: 161 EEGKLIDILEETLEDMNIETQTLLCNSVLSSLVNSGLIDKACCLLRNMMGNGDDDDVQYK 220
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
F D N ++ I L + D A + + M E G D +I+ C
Sbjct: 221 LFRDEKIRPNTASFSIVINGLMQACKLDLAVCLFQDMAEIGCNRDLLLYNNLINGLCNSD 280
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ +E++ + E P Q + + LC+ + V ALD++ + +K +
Sbjct: 281 RLEESYKLLKEMEESGFKPTQFTLNSIFGCLCKR-QDVSGALDLVKKMRLYGCEPWVKHY 339
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+ ++R LC+ A L+ M+ EG PP +++++ + ++ A+++ K + +
Sbjct: 340 TLLVRKLCKHGKAAEASIFLTDMVQEGFPPNIIAYSALLGGLIEVQEVDQALKLFKDISA 399
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
RG PDV Y LM G + EEA + NE S VTY+ LI G+CK D
Sbjct: 400 RGRCPDVIAYNILMKGLYEAHRTEEARNLFNEMVMKGLIPSVVTYNLLIDGWCKNGCIDD 459
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
A+ L M +PNV Y LI LC KA A L +MR +G N +
Sbjct: 460 AMNCLCSMSAKEREPNVFTYTTLIDGLC-KAGRPDDAVMLWNEMRRRGCRPNRV 512
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 159/354 (44%), Gaps = 19/354 (5%)
Query: 190 KEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
++ G L + + L+ FSK G+ +FE K + N++T+ I ++ D
Sbjct: 37 QDHGWLDAYVFSILVLSFSKWGQVDKSFEFIEKMEEQNFRLNEKTFCNLIHGFVKQSRVD 96
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
+ KM + G PD +I FC K +A +Y + K+ P VV+ LI
Sbjct: 97 KGVQLFYKMQKYGLSPDISLYDVLIGGFCSNKKLDKALSLYAEMKMLKIQPDIGVVSKLI 156
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
SS +E + + + + L+D + E + +SV+ SL + A LL M+ G
Sbjct: 157 SSFPEEGKLIDILEETLEDMNIETQTLLC---NSVLSSLVNSGLIDKACCLLRNMMGNGD 213
Query: 370 P--------------PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
P A F+ VI+ +A + A+ + + M G D+ Y L+
Sbjct: 214 DDDVQYKLFRDEKIRPNTASFSIVINGLMQACKLDLAVCLFQDMAEIGCNRDLLLYNNLI 273
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
+G N ++EE+ ++L E +++ + + T +++ CK ++ AL L+ +M+ G +
Sbjct: 274 NGLCNSDRLEESYKLLKEMEESGFKPTQFTLNSIFGCLCKRQDVSGALDLVKKMRLYGCE 333
Query: 476 PNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAVKELEE 528
P V Y L++ LC K A L DM +G N I AL+ + E++E
Sbjct: 334 PWVKHYTLLVRKLC-KHGKAAEASIFLTDMVQEGFPPNIIAYSALLGGLIEVQE 386
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 139/293 (47%), Gaps = 7/293 (2%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+ N LI + + ++++ + + G Q T L +R+ A + +KM
Sbjct: 268 LYNNLINGLCNSDRLEESYKLLKEMEESGFKPTQFTLNSIFGCLCKRQDVSGALDLVKKM 327
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYT-LAREKKMYPPQSVVAF--LISSLCQE 315
G P + ++ CK GKA EA + T + +E +PP +++A+ L+ L +
Sbjct: 328 RLYGCEPWVKHYTLLVRKLCKHGKAAEASIFLTDMVQEG--FPP-NIIAYSALLGGLIEV 384
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
E V AL + D S R + ++ +++ L A+ L ++M+ +G P
Sbjct: 385 QE-VDQALKLFKDISARGRCPDVIAYNILMKGLYEAHRTEEARNLFNEMVMKGLIPSVVT 443
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N +I + K G + AM L M ++ +P+V+TYT L+ G G+ ++A + NE +
Sbjct: 444 YNLLIDGWCKNGCIDDAMNCLCSMSAKEREPNVFTYTTLIDGLCKAGRPDDAVMLWNEMR 503
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ R + V + I G CK ++ + AL +EM++ ++P+ Y L+ +
Sbjct: 504 RRGCRPNRVAFMGFIHGLCKCDKPEAALIHFHEMEEEEMEPDTYVYISLVSAF 556
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/324 (19%), Positives = 113/324 (34%), Gaps = 40/324 (12%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ +C+S +E Y L ++E G K T LN + K A ++
Sbjct: 270 NNLINGLCNSDRLEESYKLLKEMEESGFKP----TQFTLNSIFGCLCKRQDVSGALDLVK 325
Query: 222 KFGDYGCVANQETYYFTIEALSRR------KIF--------------------------- 248
K YGC + Y + L + IF
Sbjct: 326 KMRLYGCEPWVKHYTLLVRKLCKHGKAAEASIFLTDMVQEGFPPNIIAYSALLGGLIEVQ 385
Query: 249 --DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVA 306
D A + + + G PD ++ + + +EA ++ K + P
Sbjct: 386 EVDQALKLFKDISARGRCPDVIAYNILMKGLYEAHRTEEARNLFNEMVMKGLIPSVVTYN 445
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
LI C+ + + A++ L S + R+ + ++++I LC+ A L ++M
Sbjct: 446 LLIDGWCK-NGCIDDAMNCLCSMSAKEREPNVFTYTTLIDGLCKAGRPDDAVMLWNEMRR 504
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
G P F I K A+ M ++PD Y Y L+S + N
Sbjct: 505 RGCRPNRVAFMGFIHGLCKCDKPEAALIHFHEMEEEEMEPDTYVYISLVSAFVNISNFPM 564
Query: 427 ACEILNEAKKNHSRLSPVTYHTLI 450
A EIL + + P+ + +I
Sbjct: 565 AFEILKKMVDRRNFPDPLDKNCII 588
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 38/163 (23%)
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK----------------------- 435
MR +GL YT T ++ Y N G+ +EA + NE +
Sbjct: 1 MRDQGLSFSKYTLTPVLQVYCNAGKFDEALNVFNEIQDHGWLDAYVFSILVLSFSKWGQV 60
Query: 436 -----------KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
+ + RL+ T+ LI G+ K D ++L +M+ G+ P++ Y+ L
Sbjct: 61 DKSFEFIEKMEEQNFRLNEKTFCNLIHGFVKQSRVDKGVQLFYKMQKYGLSPDISLYDVL 120
Query: 485 IQSLCL-KALDWRTAEKLLEDMRLKGLHLN-GITRALIRAVKE 525
I C K LD A L +M++ + + G+ LI + E
Sbjct: 121 IGGFCSNKKLD--KALSLYAEMKMLKIQPDIGVVSKLISSFPE 161
>gi|302767746|ref|XP_002967293.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
gi|300165284|gb|EFJ31892.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
Length = 321
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 131/295 (44%), Gaps = 2/295 (0%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
GC+ T+ ++ L + A+ + E M E G P++ I+ CK G++ EA
Sbjct: 5 GCIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGRSAEA 64
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
+ R + P LI C+E E + AL++L + +G + +++ +
Sbjct: 65 YGFIETMRSMGVSPTIVTYNLLIDGFCKE-EKLHRALEILQEMTGRGHEPNHVTYNTFLH 123
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
LC+ V A L M + + ++I +AG + A +L M + G P
Sbjct: 124 GLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVP 183
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
Y ++S G ++ EA ++ + +T+ ++ GYC+ D AL LL
Sbjct: 184 KPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLL 243
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIR 521
+MK G+ P YN LI +L +A A +LL++M +GL N T AL+R
Sbjct: 244 QQMKSAGLAPREVIYNTLIDALN-RAGRVSEAYRLLQEMISRGLSPNSRTYALMR 297
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 100/253 (39%), Gaps = 37/253 (14%)
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M E G +P G ++ CK + +A + + E+ +P V ++ +LC+E
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGR 60
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
+ + A + M S G P +N
Sbjct: 61 SAE------------------------------------AYGFIETMRSMGVSPTIVTYN 84
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+I + K + A+E+L+ M RG +P+ TY + G G++++A + +
Sbjct: 85 LLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDDALALFRAMTEK 144
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
RL Y TLI G C+ + A LL+EM++ G P YN ++ LC K
Sbjct: 145 KIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLC-KGSRINE 203
Query: 498 AEKLLEDMRLKGL 510
A KL + M G+
Sbjct: 204 AHKLFKRMTGSGI 216
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 56/153 (36%), Gaps = 36/153 (23%)
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
M +G P F ++ KA +T A E++++M RG P+ + G+M G+
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGR 60
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
EA + M+ +GV P + YN
Sbjct: 61 SAEA-----------------------------------YGFIETMRSMGVSPTIVTYNL 85
Query: 484 LIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
LI C K A ++L++M +G N +T
Sbjct: 86 LIDGFC-KEEKLHRALEILQEMTGRGHEPNHVT 117
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 135/283 (47%), Gaps = 6/283 (2%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
T+ I R + D A + +KM G D+ +I FC+ G+ EA ++
Sbjct: 166 TFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFREL 225
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
+ MY A L+ LC + L ML + A + +++++ CR +
Sbjct: 226 EQPDMY----THAALVKGLCDARRGEE-GLYMLQKMKELGWRPATRAYAALVDLWCREQK 280
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
A+ +L++M G P +V++AY + G M+ A+ + + M+ +G +P+V+TY
Sbjct: 281 AEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNA 340
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
++ G+ N G++ +A +L++ ++ VTY+ LIRG C + A +LL M+ G
Sbjct: 341 MVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNG 400
Query: 474 VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ + YN LI +LC K A L + + +G+ N +T
Sbjct: 401 LAADQYTYNVLIDALC-KTGKVDEACSLFDGLEYRGIRPNSVT 442
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 132/287 (45%), Gaps = 5/287 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F + G+ A E+F + + T+ ++ L + + + +KM E G
Sbjct: 205 LIEGFCETGRVDEALELFRELEQ----PDMYTHAALVKGLCDARRGEEGLYMLQKMKELG 260
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P + ++ +C+ KA+EA + + + P ++++ C+E + A
Sbjct: 261 WRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGR-MSGA 319
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+ + + + + + ++++++ C + V+ A LL +M G P +N +I
Sbjct: 320 VRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRG 379
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
G + A +L+LM GL D YTY L+ G+++EAC + + + R +
Sbjct: 380 QCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPN 439
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
VT++T+I G CK +FD A L +M G P+ Y+ I++LC
Sbjct: 440 SVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLC 486
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 131/316 (41%), Gaps = 40/316 (12%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+A+++ C+ + AL D ++E G E V+T N LI G ++AF +
Sbjct: 339 NAMVQGFCNVGKVYKAMALLDQMRECG-VEPDVVTY---NLLIRGQCIDGHIESAFRLLR 394
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G A+Q TY I+AL + D A S+ + + G P+S +I+ CKGG
Sbjct: 395 LMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGG 454
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
K A + + ++S+ C D Y PF
Sbjct: 455 KFDVA---------------CTFLEKMVSAGCAPD------------------TYTYSPF 481
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
I +LC+ K + + +M+ + P + VI K + A + M S
Sbjct: 482 ---IENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVS 538
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G PDV TYT + Y N G++ EA ++ E KK + + Y+TLI G+ + + D
Sbjct: 539 LGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDH 598
Query: 462 ALKLLNEMKDVGVQPN 477
A+ +L M V PN
Sbjct: 599 AVTILKHMTGVASMPN 614
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 85/170 (50%), Gaps = 5/170 (2%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++++IR+LCR D+ A+ LS M+ G P FNS+I Y + + A ++ M
Sbjct: 132 YNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMP 191
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
RG D +Y L+ G+ G+++EA E+ E ++ T+ L++G C +
Sbjct: 192 LRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQPDM----YTHAALVKGLCDARRGE 247
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
L +L +MK++G +P Y L+ C + AEK+L +M GL
Sbjct: 248 EGLYMLQKMKELGWRPATRAYAALVDLWC-REQKAEEAEKMLNEMFDNGL 296
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 80/177 (45%), Gaps = 19/177 (10%)
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP-PGNAVFNSVISAYSKAGDMTPAMEMLK 397
+ F S++ R L + M GPP P A +N++I A + D+ A L
Sbjct: 94 RTFRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLS 153
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
LM G +PD +T+ L+ GY Q++ A ++ ++ V+Y LI G+C+
Sbjct: 154 LMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETG 213
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC--------------LKALDWRTAEK 500
D AL+L E++ QP++ + L++ LC +K L WR A +
Sbjct: 214 RVDEALELFRELE----QPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATR 266
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/371 (19%), Positives = 134/371 (36%), Gaps = 53/371 (14%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI K GK A +F+ G N T+ I L + FD A + EKM+
Sbjct: 409 NVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVS 468
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD+ I CK ++E +K + P +I L +E
Sbjct: 469 AGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKE-RNYG 527
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
LA + + +++ +R+ C +H A+ ++ +M G +N++I
Sbjct: 528 LATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLI 587
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYT------------------------------ 410
++ G A+ +LK M P+ +T
Sbjct: 588 DGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIEL 647
Query: 411 ---------------------YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
Y ++ G++ +++E +++ K++ L+ Y +L
Sbjct: 648 ADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSL 707
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
+ +CKL + A LL M G PN+ Y L+ + R A+++ +R K
Sbjct: 708 VNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADR-AKEIFRGLRWKE 766
Query: 510 LHLNGITRALI 520
+ + I +I
Sbjct: 767 YNTDEIVWKII 777
>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
Length = 347
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 127/284 (44%), Gaps = 37/284 (13%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
GC N T+ I L RR + + A V E++ + G P+S ++ FCK
Sbjct: 81 GCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAFCK------- 133
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
+KKM + V ++S C D I +++++
Sbjct: 134 --------QKKMDKAMAFVELMVSRGCYPD---------------------IVSYNTLLT 164
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
+LCR +V A LL ++ +G P +N+VI +KAG A+E+L M S+GL+P
Sbjct: 165 ALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQP 224
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
D+ TYT + SG ++EEA + + R + V Y+ ++ G CK E A+ L
Sbjct: 225 DIITYTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLF 284
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+ M G PN Y L++ L + L + A LL + +G+
Sbjct: 285 SYMISNGCMPNESTYTILVEGLAYEGL-VKEARDLLGQLCSRGV 327
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 131/277 (47%), Gaps = 9/277 (3%)
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
++ ++ D GC + TY + + + D A E + G P++ ++
Sbjct: 1 MKLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKG 60
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
+ ++A + K P LIS LC+ V+ A+++L+ KY
Sbjct: 61 LFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRG-LVEPAMEVLEQIP----KY 115
Query: 337 AIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
P ++ ++ + C+ K + A + M+S G P +N++++A + G++ A
Sbjct: 116 GCTPNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVA 175
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
+++L ++ +G P + +Y ++ G G+ +EA E+L+E + +TY T+ G
Sbjct: 176 IDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASG 235
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
C+ ++ + A++ +++D+G++P V YN ++ LC
Sbjct: 236 LCREDKIEEAIRTFCKVQDMGIRPTVVLYNAILLGLC 272
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 115/239 (48%), Gaps = 3/239 (1%)
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKD 353
R+K P +++ +CQE V A++ L++ + ++ V++ L +
Sbjct: 8 RDKGCAPDIITYNVVLNGICQEGR-VDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAER 66
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
A+ L+ +M +G PP FN +IS + G + PAME+L+ + G P+ +Y
Sbjct: 67 WEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNP 126
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
L+ + +M++A + V+Y+TL+ C+ E D A+ LL+++K G
Sbjct: 127 LLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKG 186
Query: 474 VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIE 532
P + YN +I L KA + A +LL++M KGL + IT I A ED IE
Sbjct: 187 CSPVLISYNTVIDGL-TKAGKTKEALELLDEMISKGLQPDIITYTTI-ASGLCREDKIE 243
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 107/237 (45%), Gaps = 1/237 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V N LI+ + G + A EV + YGC N +Y + A ++K D A + E
Sbjct: 86 VVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFVE 145
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
M+ G PD +++ C+ G+ A + + K P +I L +
Sbjct: 146 LMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTKAG 205
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+T K AL++LD+ + + I ++++ LCR + A K+ G P ++
Sbjct: 206 KT-KEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVVLY 264
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
N+++ K + A+++ M S G P+ TYT L+ G A G ++EA ++L +
Sbjct: 265 NAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEGLVKEARDLLGQ 321
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 11/222 (4%)
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+ +LD+ + I ++ V+ +C+ V A L + S G P +N V+
Sbjct: 1 MKLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKG 60
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
A A ++++ M +G P+V T+ L+S G +E A E+L + K +
Sbjct: 61 LFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPN 120
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
++Y+ L+ +CK ++ D A+ + M G P++ YN L+ +LC + A LL
Sbjct: 121 SLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNG-EVDVAIDLL 179
Query: 503 EDMRLKG-----LHLNGITRALIRAVK-----ELEEDAIENG 534
++ KG + N + L +A K EL ++ I G
Sbjct: 180 HQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKG 221
>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 192/412 (46%), Gaps = 15/412 (3%)
Query: 116 DGYLESSLDSFELDL--HED--FVLKVLETPLVLGENLVCF-FKWVTSGVVD---ALLKA 167
D L++ L +FE L ED F+L+ L + + CF F V G + L A
Sbjct: 133 DASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFALVREGRKNERGKLASA 192
Query: 168 ICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYG 227
+ S++G+ L V E E TV + LI+ + K G A +VF G
Sbjct: 193 MISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSG 252
Query: 228 CVANQETYYFTIEALSRRKI-FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
N TY I+A + + F + E+M+ G PD +++ +GG + A
Sbjct: 253 LKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAA 312
Query: 287 HVVYTLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSV 344
++ ++ + Q V + L+ ++C+ + + LA +++ + G+ + +S++
Sbjct: 313 RNLFNEMIDRGI--DQDVFTYNTLLDAVCKGGQ-MDLAYEIMLEMPGKKILPNVVTYSTM 369
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
+ + A L ++M G +N+++S Y+K G A+++ K M S G+
Sbjct: 370 ADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGV 429
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
K DV TY L+ GY G+ E + E KK+ + +TY TLI Y K ++ A++
Sbjct: 430 KKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAME 489
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ E K G++ +V Y++LI +LC L +A LL++M +G+ N +T
Sbjct: 490 VFREFKQAGLKADVVLYSELINALCKNGL-VDSAVLLLDEMTKEGIRPNVVT 540
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/371 (19%), Positives = 163/371 (43%), Gaps = 27/371 (7%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ LL A+C G+ ++ ++I+ E+ K K + V + + ++K G+ + A ++N
Sbjct: 332 NTLLDAVCKG-GQMDL--AYEIMLEMPGK-KILPNVVTYSTMADGYAKAGRLEDALNLYN 387
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ G ++ +Y + ++ F+ A VC++M +G D ++ + K G
Sbjct: 388 EMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQG 447
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
K E V+ ++ +++P + LI + + + A+++ +F K + +
Sbjct: 448 KFNEVTRVFKEMKKDRVFPNLLTYSTLID-VYSKGSLYEEAMEVFREFKQAGLKADVVLY 506
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
S +I +LC+ V A LL +M EG P +NS+I A+ ++ ++ +
Sbjct: 507 SELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFLVDGVGASNE 566
Query: 402 RGLKPDVYTYTGLMSG-------YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
R + + L+ G + +G + ++++E + P L +
Sbjct: 567 RQSESPTFM---LIEGVDESEINWDDGHVFKFYQQLVSEKE------GPAKKERLGK--- 614
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG 514
EE L + +M ++ ++PNV ++ ++ + C + A LLE++RL + G
Sbjct: 615 --EEIRSILSVFKKMHELEIKPNVVTFSAILNA-CSRCKSIEDASMLLEELRLFDNQVYG 671
Query: 515 ITRALIRAVKE 525
+ L+ E
Sbjct: 672 VAHGLLMGFSE 682
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 148/332 (44%), Gaps = 29/332 (8%)
Query: 133 DFVLKVLETPLVLG--ENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEK 190
D +KV E+ V G NLV + + V+DA K G E + +I +E+
Sbjct: 239 DEAIKVFESMKVSGLKPNLVTY-----NAVIDACGK------GGVEFKRVVEIFEEM--L 285
Query: 191 EKGVLTVEI-LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
GV I N L+A+ S+ G +AA +FN+ D G + TY ++A+ + D
Sbjct: 286 RNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMD 345
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYT------LAREKKMYPPQS 303
A+ + +M LP+ + + K G+ ++A +Y + ++ Y +
Sbjct: 346 LAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSY---N 402
Query: 304 VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSK 363
+ + + L + ++ +K+ +M K + +++++ + + + +
Sbjct: 403 TLLSIYAKLGRFEDALKVCKEM----GSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKE 458
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
M + P ++++I YSK AME+ + + GLK DV Y+ L++ G
Sbjct: 459 MKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGL 518
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
++ A +L+E K R + VTY+++I + +
Sbjct: 519 VDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGR 550
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 77/382 (20%), Positives = 153/382 (40%), Gaps = 82/382 (21%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+++++KLG+ + A +V + G G + TY ++ ++ F+ V ++M +
Sbjct: 402 NTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKK 461
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
P+ +I + KG +EA V+ ++ + + + LI++LC+ + V
Sbjct: 462 DRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCK-NGLVD 520
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCR------MKDVHGAKT--------------- 359
A+ +LD+ + E + + ++S+I + R + D GA
Sbjct: 521 SAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFLVDGVGASNERQSESPTFMLIEGV 580
Query: 360 --------------LLSKMISEGPPP------GNAVFNSVISAYSKAGDMTPAMEMLKLM 399
+++SE P G S++S + K M
Sbjct: 581 DESEINWDDGHVFKFYQQLVSEKEGPAKKERLGKEEIRSILSVFKK-------------M 627
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
+KP+V T++ +++ + +E+A +L E + +++ V H L+ G+ + +
Sbjct: 628 HELEIKPNVVTFSAILNACSRCKSIEDASMLLEELRLFDNQVYGVA-HGLLMGFSE-NVW 685
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK------LLEDMRLK----- 508
A L +E+K + YN L L W +K +LE R K
Sbjct: 686 IQAQYLFDEVKQMDSSTASAFYNALTDML------WHFGQKRGAQLVVLEGKRRKVWETL 739
Query: 509 ------GLHL--NGITRALIRA 522
LHL +G RA++ A
Sbjct: 740 WSDSCLDLHLMSSGAARAMVHA 761
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 53/112 (47%)
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
+ ++S G++E A + A + + LI Y K FD A+K+ MK
Sbjct: 191 SAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKV 250
Query: 472 VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRAV 523
G++PN+ YN +I + ++++ ++ E+M G+ + IT + AV
Sbjct: 251 SGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAV 302
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 152/342 (44%), Gaps = 35/342 (10%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K G+ KA + K + + Y I +L + K+ A V +MI G
Sbjct: 168 LINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKG 227
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE----DET 318
PD +I FC G KEA + + K + P LI +L +E +
Sbjct: 228 ISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAK 287
Query: 319 VKLALDM-------------LDD--FSGEARKYA---------------IKPFSSVIRSL 348
+ LA+ M L D F + K+A ++ ++++I L
Sbjct: 288 ILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGL 347
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
C+ K V A +L +M + P +NS+I K + A+ + K M+ +G++PDV
Sbjct: 348 CKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDV 407
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNE 468
Y+YT L+ G G++E+A EI L+ Y LI CK FD AL L ++
Sbjct: 408 YSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSK 467
Query: 469 MKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
M+D G P+ ++ +I++L K + + AEK+L +M +GL
Sbjct: 468 MEDKGCMPDAVTFDIIIRALFEKDENDK-AEKILREMIARGL 508
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 114/254 (44%), Gaps = 3/254 (1%)
Query: 234 TYYFT--IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYT 291
T++F + +L K + S+ ++ G PD + +I+ FC A V+
Sbjct: 57 TFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFA 116
Query: 292 LAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRM 351
++ +P + LI LC E +K AL D + + + ++I LC+
Sbjct: 117 NILKRGFHPNAITLNTLIKGLCFRGE-IKKALYFHDQLVAQGFQLDQVSYGTLINGLCKT 175
Query: 352 KDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTY 411
+ LL K+ P ++N++I++ K + A ++ M +G+ PDV TY
Sbjct: 176 GETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTY 235
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
T L+ G+ G ++EA +LNE K + + T++ LI K + A LL M
Sbjct: 236 TTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMK 295
Query: 472 VGVQPNVDEYNKLI 485
++P+V YN LI
Sbjct: 296 ACIKPDVFTYNSLI 309
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 95/221 (42%), Gaps = 4/221 (1%)
Query: 298 MYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVH 355
M PP F ++SSL ++ + + F + S +I C +
Sbjct: 51 MRPPPPTFHFNNILSSLVN-NKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHIT 109
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
A ++ + ++ G P N++I G++ A+ + ++G + D +Y L+
Sbjct: 110 LAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLI 169
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
+G G+ + +L + + + + V Y+T+I CK + A + +EM G+
Sbjct: 170 NGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGIS 229
Query: 476 PNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
P+V Y LI C+ + A LL +M+LK ++ N T
Sbjct: 230 PDVVTYTTLIHGFCIMG-HLKEAFSLLNEMKLKNINPNVCT 269
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 1/142 (0%)
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
M+ PPP FN+++S+ + + K G+ PD+ T + L++ + +
Sbjct: 48 MLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAH 107
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
+ A + K + +T +TLI+G C E AL +++ G Q + Y
Sbjct: 108 ITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGT 167
Query: 484 LIQSLCLKALDWRTAEKLLEDM 505
LI LC K + + +LL +
Sbjct: 168 LINGLC-KTGETKAVARLLRKL 188
>gi|255660904|gb|ACU25621.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 484
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 110/218 (50%), Gaps = 1/218 (0%)
Query: 272 KIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSG 331
KII + K A + +K + + + +I S +E V+ ++ M
Sbjct: 50 KIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEG-IVQESVKMFQKMEE 108
Query: 332 EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
+ IK ++++ +++ R AK +KM+SEG P FN +I + +G +
Sbjct: 109 LGVERTIKSYNALFKAILRRGRYMMAKRYFNKMLSEGIEPARHTFNVMIWGFFLSGKVET 168
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
A + M+SR + PDV TY +++GY +MEEA + E K + + VTY TLI+
Sbjct: 169 ANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIK 228
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
GY +++ D AL+L+ EMK G++PN Y+ L+ LC
Sbjct: 229 GYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLC 266
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 135/303 (44%), Gaps = 24/303 (7%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I + K G + + ++F K + G ++Y +A+ RR + A KM+ G
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKAILRRGRYMMAKRYFNKMLSEG 145
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISS---LCQEDETV 319
P +I F GK + A+ + + +++ P +I+ + + +E
Sbjct: 146 IEPARHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAE 205
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
K ++M G + + ++++I+ + V A L+ +M G P ++++
Sbjct: 206 KYFVEM----KGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTL 261
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKP-DVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+ AG M A +LK M + L P D + L+S N G ++ A ++L K
Sbjct: 262 LPGLCNAGKMIEARSILKEMMDKYLAPTDNSIFMRLISSQCNSGNLDAAADVL----KAM 317
Query: 439 SRLSPVT----YHTLIRGYCKLEEFDCALKLLNEM--KDVGVQPNV------DEYNKLIQ 486
RLS T Y LI +CK ++D A+KLL+++ KD+ ++P YN +I+
Sbjct: 318 IRLSVPTEAGHYGVLIENFCKAGQYDQAVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIE 377
Query: 487 SLC 489
LC
Sbjct: 378 YLC 380
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 116/262 (44%), Gaps = 6/262 (2%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
N+ET+ IE L R + A + M + G D + +I + K G +E+ V
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQES--VK 101
Query: 291 TLAREKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSL 348
+ +++ +++ ++ L ++ + + +A + E + A F+ +I
Sbjct: 102 MFQKMEELGVERTIKSYNALFKAILRRGRYM-MAKRYFNKMLSEGIEPARHTFNVMIWGF 160
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
V A M S P +N++I+ Y + M A + M+ R ++P V
Sbjct: 161 FLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTV 220
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNE 468
TYT L+ GY + Q+++A ++ E K + + +TY TL+ G C + A +L E
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAGKMIEARSILKE 280
Query: 469 MKDVGVQPNVDE-YNKLIQSLC 489
M D + P + + +LI S C
Sbjct: 281 MMDKYLAPTDNSIFMRLISSQC 302
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 131/339 (38%), Gaps = 52/339 (15%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
T++ N L + G+ A FNK G + T+ I + A
Sbjct: 114 TIKSYNALFKAILRRGRYMMAKRYFNKMLSEGIEPARHTFNVMIWGFFLSGKVETANRFF 173
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
E M PD +I+ + + K +EA + + + + P LI
Sbjct: 174 EDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSV 233
Query: 316 DETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEG-PP 370
D+ V AL ++++ G + IKP +S+++ LC + A+++L +M+ + P
Sbjct: 234 DQ-VDDALRLVEEMKG----FGIKPNAITYSTLLPGLCNAGKMIEARSILKEMMDKYLAP 288
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
N++F +IS+ +G++ A ++LK M + + Y L+ + GQ ++A ++
Sbjct: 289 TDNSIFMRLISSQCNSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQAVKL 348
Query: 431 LN---------------------------------EAKKNHSRL---------SPVTYHT 448
L+ +A K + + P +T
Sbjct: 349 LDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQAAKAEALVRQLLKLGVQDPTALNT 408
Query: 449 LIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
LIRG+ + D A +LL M V Y+ L+QS
Sbjct: 409 LIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQS 447
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 99/251 (39%), Gaps = 11/251 (4%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
TV LI + + + A + + +G N TY + L A S+
Sbjct: 219 TVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAGKMIEARSIL 278
Query: 256 EKMIETGSLP-DSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC- 313
++M++ P D+ ++IS C G A V + LI + C
Sbjct: 279 KEMMDKYLAPTDNSIFMRLISSQCNSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCK 338
Query: 314 --QEDETVKLALDML---DDFSGEARKYAIKP--FSSVIRSLCRMKDVHGAKTLLSKMIS 366
Q D+ VKL LD L D ++P ++ +I LC A+ L+ +++
Sbjct: 339 AGQYDQAVKL-LDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQAAKAEALVRQLLK 397
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
G A+ N++I +S+ G A E+LK+M R + + Y L+ Y + +
Sbjct: 398 LGVQDPTAL-NTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPAD 456
Query: 427 ACEILNEAKKN 437
A L+ +N
Sbjct: 457 AKAALDSMIEN 467
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 115/302 (38%), Gaps = 21/302 (6%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I + ++ K + A + F + TY I+ D A + E+M
Sbjct: 189 NTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKG 248
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPP-QSVVAFLISSLCQEDETV 319
G P++ ++ C GK EA + +K + P S+ LISS C +
Sbjct: 249 FGIKPNAITYSTLLPGLCNAGKMIEARSILKEMMDKYLAPTDNSIFMRLISSQCNSG-NL 307
Query: 320 KLALDMLD-----DFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG---PPP 371
A D+L EA Y + +I + C+ A LL K+I + P
Sbjct: 308 DAAADVLKAMIRLSVPTEAGHYGV-----LIENFCKAGQYDQAVKLLDKLIEKDIILRPQ 362
Query: 372 GN-----AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
+ +N +I G A +++ + G++ D L+ G++ G +
Sbjct: 363 STLHLEPSAYNPMIEYLCNNGQAAKAEALVRQLLKLGVQ-DPTALNTLIRGHSQEGSPDS 421
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A E+L + Y +L++ Y K E A L+ M + P+ + +++
Sbjct: 422 AFELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPADAKAALDSMIENDHLPDSSLFRSVME 481
Query: 487 SL 488
SL
Sbjct: 482 SL 483
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 156/354 (44%), Gaps = 43/354 (12%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEIL--NELIALFSKLGKGKAAFEV 219
+ LLK++C+ + L ++ E G V + +++ N +I F K G A ++
Sbjct: 188 NILLKSLCNQGKSGQADDLLRMMAEGGT----VCSPDVVAYNTVIDGFFKEGDVNKACDL 243
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
F + G + TY + AL + + D A + +M+ G LPD+ +I +
Sbjct: 244 FKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSS 303
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
G+ KEA V+ R + + P VVA
Sbjct: 304 TGQWKEAVRVFKEMRRQSILP--DVVAL-------------------------------- 329
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
++++ SLC+ + A+ + M +G P + +++ Y+ G + ++ LM
Sbjct: 330 --NTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLM 387
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
G+ P + T+ L+ YAN G +++A I NE + + + VTY T+I C++ +
Sbjct: 388 LGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKM 447
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
D A++ N+M D GV P+ Y+ LIQ C A++L+ ++ G+ L+
Sbjct: 448 DDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHG-SLLKAKELISEIMNNGMRLD 500
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 142/327 (43%), Gaps = 8/327 (2%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V LN L+ K GK K A +VF+ G + +Y + + + + +
Sbjct: 326 VVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFD 385
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ-- 314
M+ G P +I + G +A +++ R+ + P +I++LC+
Sbjct: 386 LMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIG 445
Query: 315 -EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
D+ ++ M+D KYA + +I+ C + AK L+S++++ G
Sbjct: 446 KMDDAMEKFNQMIDQ-GVVPDKYA---YHCLIQGFCTHGSLLKAKELISEIMNNGMRLDI 501
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
F S+I+ K G + A + L + GL PD Y LM GY G+ME+A + +
Sbjct: 502 VFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDA 561
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
+ V Y TL+ GYCK+ D L L EM G++P+ YN +I L +A
Sbjct: 562 MVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL-FEAG 620
Query: 494 DWRTAEKLLEDMRLKGLHLNGITRALI 520
A+ +M G+ +N T +++
Sbjct: 621 RTVPAKVKFHEMTESGIAMNKCTYSIV 647
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 137/324 (42%), Gaps = 7/324 (2%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+IA ++GK A E FN+ D G V ++ Y+ I+ A + +++ G
Sbjct: 437 VIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNG 496
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
D G II+ CK G+ +A ++ L ++P V L+ C + K A
Sbjct: 497 MRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEK-A 555
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
L + D + + + +++ C++ + +L +M+ +G P ++N +I
Sbjct: 556 LRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDG 615
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+AG PA M G+ + TY+ ++ G +EA + E + + ++
Sbjct: 616 LFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKID 675
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
+T +T+I G + + A L + G+ P Y+ +I +L + L AE +
Sbjct: 676 IITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGL-VEEAEDMF 734
Query: 503 EDMRLKGLH-----LNGITRALIR 521
M+ G LN + R L++
Sbjct: 735 SSMQNAGCEPDSRLLNHVVRELLK 758
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 118/262 (45%), Gaps = 4/262 (1%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA-HVVYTL 292
TY ++ +R + A + +++ TG D+ ++ FC+ + EA ++
Sbjct: 115 TYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHR 174
Query: 293 AREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS--GEARKYAIKPFSSVIRSLCR 350
E P L+ SLC + ++ + A D+L + G + +++VI +
Sbjct: 175 TPELGCVPDVFSYNILLKSLCNQGKSGQ-ADDLLRMMAEGGTVCSPDVVAYNTVIDGFFK 233
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
DV+ A L +M+ G PP ++SV+ A KA M A L+ M ++G+ PD +T
Sbjct: 234 EGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWT 293
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
Y L+ GY++ GQ +EA + E ++ V +TL+ CK + A + + M
Sbjct: 294 YNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMA 353
Query: 471 DVGVQPNVDEYNKLIQSLCLKA 492
G P+V Y ++ K
Sbjct: 354 MKGQNPDVFSYTIMLNGYATKG 375
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 122/289 (42%), Gaps = 1/289 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N LI ++ G A +FN+ D+G + TY I AL R D A +MI
Sbjct: 399 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMI 458
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G +PD +I FC G +A + + M +I++LC+ +
Sbjct: 459 DQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVM 518
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
A ++ D ++ ++ C + + A + M+S G P + ++
Sbjct: 519 D-AQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTL 577
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
++ Y K G + + + + M +G+KP Y ++ G G+ A +E ++
Sbjct: 578 VNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGI 637
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
++ TY ++RG K FD A+ L E++ + V+ ++ N +I +
Sbjct: 638 AMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGM 686
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 13/146 (8%)
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT-----PAMEMLKLMRS-------RGL 404
A LL ++ G P + N ++A ++A PA+ + R+ R L
Sbjct: 50 AHDLLDELQRRGTPVLDRDLNGFLAALARAPSSAACGSGPALAVALFNRAASRAQGPRVL 109
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
P YTY LM + E A + + R+ + L++G+C+ + D AL
Sbjct: 110 SPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALD 169
Query: 465 -LLNEMKDVGVQPNVDEYNKLIQSLC 489
LL+ ++G P+V YN L++SLC
Sbjct: 170 ILLHRTPELGCVPDVFSYNILLKSLC 195
>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
Length = 660
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 157/366 (42%), Gaps = 27/366 (7%)
Query: 165 LKAICSSVGKKEVY----ALWDIVKEIGEKEKGVLTVEILNELI------------ALFS 208
+ + S GK ++ AL ++ ++ L IL+ L+ AL +
Sbjct: 101 IAGLVSKFGKHNIFPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLT 160
Query: 209 KLGKGKAAFE---VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM------I 259
LGK + + + K D T+ I L + + D A V EKM
Sbjct: 161 GLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEET 220
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ PD+ +I CK G+ +EA + R + P + LI+ C+ E +
Sbjct: 221 KVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGE-I 279
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
++A + ++ + + ++++ +C+ + A M +G N +
Sbjct: 280 EVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVF 339
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I+A+ +M AME L M G PD Y L+ G A G++++A ++++ K+
Sbjct: 340 INAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGF 399
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
L V Y+ LI +CK + D A + LNEM+ GV+P+ YN LI S K +++ A
Sbjct: 400 CLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLI-SYFSKIGNFKLAH 458
Query: 500 KLLEDM 505
K ++ M
Sbjct: 459 KFMKKM 464
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 152/347 (43%), Gaps = 12/347 (3%)
Query: 188 GEKEKGVLTVE----ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALS 243
GEKE+ + V + N LI K+G+ + A + K C T+ I
Sbjct: 215 GEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYC 274
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS 303
R + A + +M P+ + ++ CK + A + + ++K +
Sbjct: 275 RSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNV 334
Query: 304 VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSK 363
I++ C + K A++ LD+ S + + ++I L + + A +++SK
Sbjct: 335 TYTVFINAFCNVNNMNK-AMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSK 393
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
+ G +N +IS + K + A E L M G+KPD TY L+S ++ G
Sbjct: 394 LKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGN 453
Query: 424 MEEACEILNEAKKNHSRLSPV--TYHTLIRGYCKLEEFDCALKLLNEMKDVG--VQPNVD 479
+ A + + + + LSP TY LI YC D A+K+ EM +V V PN
Sbjct: 454 FKLAHKFMKKMTEEEG-LSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTV 512
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAVKE 525
YN LI SLC K A LL+DM+ +G+ N T ++ +A+++
Sbjct: 513 IYNILIDSLC-KQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRD 558
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 133/360 (36%), Gaps = 80/360 (22%)
Query: 157 TSGVVDALLKAICSSVGKKEV-YALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKA 215
T+ + L+ C S G+ EV + L++ + E + E V+T LN L+ K +
Sbjct: 262 TTATFNCLINGYCRS-GEIEVAHKLFNEM-ENAQIEPNVIT---LNTLVDGMCKHNRIST 316
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A E F G N TY I A + A ++M + G PD+ +I
Sbjct: 317 AVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLIC 376
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
+ G+ +A V + +E F + +C
Sbjct: 377 GLAQAGRLDDASSVVSKLKE---------AGFCLDRVC---------------------- 405
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
++ +I C+ + A+ L++M G P + +N++IS +SK G+ A +
Sbjct: 406 -----YNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKF 460
Query: 396 LKLM-RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRG 452
+K M GL P V+TY L+ Y ++EA +I E S++ P V Y+ LI
Sbjct: 461 MKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDS 520
Query: 453 YCKLEE-----------------------------------FDCALKLLNEMKDVGVQPN 477
CK + D A KL++ M + P+
Sbjct: 521 LCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPD 580
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 88/212 (41%), Gaps = 6/212 (2%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI ++ G+ A V +K + G ++ Y I ++ D A +M G
Sbjct: 374 LICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAG 433
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAH-VVYTLAREKKMYPPQSVVAFLISSLCQE---DET 318
PDS +IS+F K G K AH + + E+ + P LI + C DE
Sbjct: 434 VKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEA 493
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+K+ +M + S I ++ +I SLC+ V+ A +LL M G P +NS
Sbjct: 494 IKIFKEMNNVASKVPPNTVI--YNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNS 551
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ A + A +++ M + PD T
Sbjct: 552 IFKALRDKNWLDKAFKLMDRMVEQACNPDYIT 583
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 78/193 (40%), Gaps = 4/193 (2%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI+ F K K A E N+ G + TY I S+ F A +KM E
Sbjct: 407 NVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTE 466
Query: 261 TGSL-PDSEKVGKIISWFCKGGKAKEAHVVYT-LAREKKMYPPQSVV-AFLISSLCQEDE 317
L P G +I +C EA ++ + PP +V+ LI SLC++ +
Sbjct: 467 EEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQ 526
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
V AL +LDD ++S+ ++L + A L+ +M+ + P
Sbjct: 527 -VNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYITME 585
Query: 378 SVISAYSKAGDMT 390
+ S G++T
Sbjct: 586 ILTEWLSAVGEIT 598
>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
Length = 538
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 132/301 (43%), Gaps = 14/301 (4%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
T+ I N +I + + A++V K + V N TY + L R A V
Sbjct: 87 TLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVF 146
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVA--FLISSLC 313
++M G P+ G +I + G+ EA + + ++ + P V+ ++ LC
Sbjct: 147 QEMKRNGCKPNPITYGTLIQHLSRAGEIDEA--LRVMIEQRSLELPTDVITCTTIVGGLC 204
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE-----G 368
+ LD F E R+ ++P +L HG + + E G
Sbjct: 205 KASR-----LDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKG 259
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
A + + A KAG + A + ++ +R G+ PDV TY+ L++ +A GQ + +
Sbjct: 260 GSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASL 319
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
E+L + ++N + VTY TLI CK +F A +LL M+ G PNV YN ++ L
Sbjct: 320 ELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGL 379
Query: 489 C 489
C
Sbjct: 380 C 380
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 106/231 (45%), Gaps = 2/231 (0%)
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
++E G DS+ + + + K E ++TL + + ++ ++ LC
Sbjct: 10 VVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAG- 68
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
AL+++ + SG + ++ +I LCR V A +L KM+ E P +
Sbjct: 69 MANQALELVRELSG-VYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYT 127
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+++ ++ A E+ + M+ G KP+ TY L+ + G+++EA ++ E +
Sbjct: 128 ILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSL 187
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+T T++ G CK D ALK + EM+ +GV+PN Y+ L+
Sbjct: 188 ELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGF 238
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 121/318 (38%), Gaps = 45/318 (14%)
Query: 212 KGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL---PDSE 268
K K A EVF + GC N TY I+ LSR D A V MIE SL D
Sbjct: 138 KTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRV---MIEQRSLELPTDVI 194
Query: 269 KVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA------ 322
I+ CK + +A R+ + P + + L+ Q E ++
Sbjct: 195 TCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEE 254
Query: 323 -------------------------LDMLDDFSGEARKYAIKP----FSSVIRSLCRMKD 353
LD E R+ + P +S +I + R
Sbjct: 255 KARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQ 314
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
+ LL M G P ++++I+ K A +L+LM + G P+V TY
Sbjct: 315 FDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNS 374
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKD 471
+M G G+M+E + K SR SP VTY ++ G K D A+KL +K
Sbjct: 375 VMDGLCKSGKMDEVHRVYEMMLK--SRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKS 432
Query: 472 VGVQPNVDEYNKLIQSLC 489
P+ Y+ +I SLC
Sbjct: 433 SREGPDAAAYSMVITSLC 450
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 112/277 (40%), Gaps = 5/277 (1%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE--KMIETGSLPDSEKVGKI 273
A + + G N+ TY + + D E K + GSL + G
Sbjct: 212 ALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPG-Y 270
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEA 333
+ CK G A R+ + P + LI++ + + +L++L+D
Sbjct: 271 LDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQ-FDASLELLEDMRRNG 329
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
K + +S++I LC+ + A LL M + G PP +NSV+ K+G M
Sbjct: 330 VKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVH 389
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
+ ++M PDV TY+ +M+G + G ++ A ++ K + Y +I
Sbjct: 390 RVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSL 449
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNV-DEYNKLIQSLC 489
C+ + + A + + M+ N+ L+ +LC
Sbjct: 450 CRAGKLEEACGMYHGMEVTVAGDNICRALAGLVAALC 486
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 72/161 (44%), Gaps = 2/161 (1%)
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
AK L ++ G + F + + + + + + L+ SRG+ TY ++
Sbjct: 2 AAKLLERSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVV 61
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
G G +A E++ E ++ + Y+ +I G C+ A K+L +M + +
Sbjct: 62 DGLCGAGMANQALELVRELSGVYTP-TLFIYNGIITGLCRASRVMDAYKVLEKMVEESIV 120
Query: 476 PNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
PNV Y L+ LC ++ + A ++ ++M+ G N IT
Sbjct: 121 PNVFTYTILLNGLC-RSNKTKLAREVFQEMKRNGCKPNPIT 160
>gi|115488482|ref|NP_001066728.1| Os12g0456100 [Oryza sativa Japonica Group]
gi|77555567|gb|ABA98363.1| hypothetical protein LOC_Os12g27060 [Oryza sativa Japonica Group]
gi|113649235|dbj|BAF29747.1| Os12g0456100 [Oryza sativa Japonica Group]
gi|125579252|gb|EAZ20398.1| hypothetical protein OsJ_36005 [Oryza sativa Japonica Group]
Length = 1117
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 185/422 (43%), Gaps = 20/422 (4%)
Query: 94 EEAYEIDGDKLENVLSLLQSSVDGY--LESSLDSFELDLHEDFVLKVLETPLVLGENLVC 151
E+A + + + +E + +L SS D + +E +L+ + D V +++ +
Sbjct: 683 EQAKDYNNEDVEQICRILSSS-DCWSSIEQALEMTSISFTPDLVDAIMKRCKANSRAALQ 741
Query: 152 FFKWV--------TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNEL 203
FF WV T+ + +K S+ K + L+ +E+ E TV+ N +
Sbjct: 742 FFSWVGKRSYYMQTTKTYNTAIKLAGSAKDFKHMRHLY---REMIWAE-CCPTVDTWNVM 797
Query: 204 IALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRK--IFDWAWSVCEKMIET 261
I + G + A E F + G ++ TY I LSRRK D A + +M
Sbjct: 798 ICQYGNAGLTEMALETFYQMKQGGFQPDKTTYSHLIMYLSRRKGRKVDAAVKIFHEMCRA 857
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
G +PD+ V +S C+ G A L K + Q+ + LI SLC+ D +
Sbjct: 858 GYIPDNGMVCTYLSVLCECGMIDRAESSVVLLC-KHGFSIQAGYSILIRSLCRSDRMAE- 915
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
AL + D+ + + S+I +L R A L++M + G ++ S +
Sbjct: 916 ALSLFDNIKNYGCSRSAYMYGSLIHALLRRDRFEDASAKLAEMKNLGIAQSTHMYTSFMI 975
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
Y D++ AM++LK M G +P V TY+ L+ G+ G + EA ++ K
Sbjct: 976 YYLGKRDVSKAMDVLKEMTENGCEPTVVTYSALIRGHMAMGMVSEAWDVFQRMKLKGPVP 1035
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
TY + CK + L+L+++M + G+ P+ + ++ L ++ ++ A+ +
Sbjct: 1036 DFETYSMFMSCLCKAGRSEDGLQLIHDMLNSGIIPSAVNFRTVVHGLNMEG-KYKLADSV 1094
Query: 502 LE 503
L+
Sbjct: 1095 LQ 1096
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 2/165 (1%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F ++R LC+ + A ++ M S +A F S+I Y + G+ A+E+L+ MR
Sbjct: 419 FEILLRGLCKDGRMDKALQVMEYMKSNSSA-SSATFGSLIDGYLRKGERMKALEVLQEMR 477
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G P +YT LM Q E AC + E ++N V LI G+ +
Sbjct: 478 EYGCVPLASSYTQLMQHLFAFDQHEAACRLYEEMQENGIEPDVVAITALIGGHVRNGHIS 537
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
A + + G +P + Y IQ LC KA A KLL++M
Sbjct: 538 EAWDAFRNINENGQKPTLKAYTVFIQELC-KASRPLEALKLLKEM 581
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 3/235 (1%)
Query: 254 VCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC 313
V + MI++ P+ + + FC GK +EA ++ K + S L+ LC
Sbjct: 369 VRDDMIKSMKYPEEYCYLEALRSFCVSGKIEEAQKIFQQMMNKSI-ASSSAFEILLRGLC 427
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
++ K AL +++ + + F S+I R + A +L +M G P
Sbjct: 428 KDGRMDK-ALQVMEYMKSNSSASS-ATFGSLIDGYLRKGERMKALEVLQEMREYGCVPLA 485
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
+ + ++ A + + M+ G++PDV T L+ G+ G + EA +
Sbjct: 486 SSYTQLMQHLFAFDQHEAACRLYEEMQENGIEPDVVAITALIGGHVRNGHISEAWDAFRN 545
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+N + + Y I+ CK ALKLL EM + +P+ ++++I +L
Sbjct: 546 INENGQKPTLKAYTVFIQELCKASRPLEALKLLKEMLESDFRPSEQTFSRIISTL 600
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 142/324 (43%), Gaps = 2/324 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+ N L+ F K G A VF++ G ++ I + + + +
Sbjct: 248 IYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKG 307
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
M G PD +I+ CK G+ E +++ + + P LI C+
Sbjct: 308 VMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGG 367
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ V LAL + + + ++++I LC++ D+ A+ L+++M + G P F
Sbjct: 368 K-VDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITF 426
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
++I K GDM A+E+ + M G++ D +T L+SG G++ +A +L +
Sbjct: 427 TTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLS 486
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ TY +I +CK + KLL EM+ G P V YN L+ LC K +
Sbjct: 487 AGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLC-KQGQMK 545
Query: 497 TAEKLLEDMRLKGLHLNGITRALI 520
A+ LL+ M G+ N IT ++
Sbjct: 546 NAKMLLDAMLNVGVAPNDITYNIL 569
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 142/324 (43%), Gaps = 5/324 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ C + ++D + + G + TV N LI+ K G + F +
Sbjct: 252 NVLMHGFCKAGDVGNARLVFDEIPKRGLRP----TVVSFNTLISGCCKSGDVEEGFRLKG 307
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G + T+ I L + D + ++M G +P+ +I CKGG
Sbjct: 308 VMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGG 367
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
K A + + + + P LI+ LC+ + +K A ++++ + K F
Sbjct: 368 KVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGD-LKEARRLVNEMTASGLKPDKITF 426
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+++I C+ D+ A + +M+ EG + F ++IS + G + A ML M S
Sbjct: 427 TTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLS 486
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G KPD TYT ++ + G ++ ++L E + + VTY+ L+ G CK +
Sbjct: 487 AGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKN 546
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLI 485
A LL+ M +VGV PN YN L+
Sbjct: 547 AKMLLDAMLNVGVAPNDITYNILL 570
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 128/294 (43%), Gaps = 5/294 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ C S +E + L K + E E V + LI K G+ +F+
Sbjct: 287 NTLISGCCKSGDVEEGFRL----KGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFD 342
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ G V N T+ I+ + D A + M+ G PD +I+ CK G
Sbjct: 343 EMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVG 402
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
KEA + + P + LI C+ D ++ AL++ E + F
Sbjct: 403 DLKEARRLVNEMTASGLKPDKITFTTLIDGCCK-DGDMESALEIKRRMVEEGIELDDVAF 461
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+++I LCR VH A +L+ M+S G P + + VI + K GD+ ++LK M+S
Sbjct: 462 TALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQS 521
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
G P V TY LM+G GQM+ A +L+ + +TY+ L+ G+ K
Sbjct: 522 DGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSK 575
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 137/289 (47%), Gaps = 12/289 (4%)
Query: 240 EALSRRKI------FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
E L RR + + +W++ +++++G P ++ FCK G A +V+
Sbjct: 215 ENLLRRVVRLRPVEIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEI 274
Query: 294 REKKMYPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRM 351
++ + P +VV+F LIS C+ + V+ + E + FS++I LC+
Sbjct: 275 PKRGLRP--TVVSFNTLISGCCKSGD-VEEGFRLKGVMESEGVCPDVFTFSALINGLCKE 331
Query: 352 KDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTY 411
+ L +M G P F ++I K G + A++ ++M ++G++PD+ TY
Sbjct: 332 GRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTY 391
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
L++G G ++EA ++NE + + +T+ TLI G CK + + AL++ M +
Sbjct: 392 NALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVE 451
Query: 472 VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
G++ + + LI LC + A ++L DM G + T ++
Sbjct: 452 EGIELDDVAFTALISGLCREG-RVHDAGRMLTDMLSAGFKPDDPTYTMV 499
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 38/216 (17%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKT--LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
I+ +++R + R++ V ++ L +++ G PP FN ++ + KAGD+ A +
Sbjct: 211 IRGCENLLRRVVRLRPVEIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLV 270
Query: 396 LKLMRSRGLKP-----------------------------------DVYTYTGLMSGYAN 420
+ RGL+P DV+T++ L++G
Sbjct: 271 FDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCK 330
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
G+++E + +E + VT+ TLI G CK + D ALK M GV+P++
Sbjct: 331 EGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVT 390
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
YN LI LC K D + A +L+ +M GL + IT
Sbjct: 391 YNALINGLC-KVGDLKEARRLVNEMTASGLKPDKIT 425
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 108/273 (39%), Gaps = 6/273 (2%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+ +C E L+D + G GV LI K GK A + F
Sbjct: 323 ALINGLCKEGRLDEGSLLFDEMCGRGLVPNGV----TFTTLIDGQCKGGKVDLALKNFQM 378
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + TY I L + A + +M +G PD +I CK G
Sbjct: 379 MLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGD 438
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+ A + E+ + LIS LC+E V A ML D K ++
Sbjct: 439 MESALEIKRRMVEEGIELDDVAFTALISGLCREGR-VHDAGRMLTDMLSAGFKPDDPTYT 497
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
VI C+ DV LL +M S+G PG +N++++ K G M A +L M +
Sbjct: 498 MVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNV 557
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
G+ P+ TY L+ G++ G + +I N K
Sbjct: 558 GVAPNDITYNILLDGHSKHGSSVDV-DIFNSEK 589
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 90/217 (41%), Gaps = 44/217 (20%)
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA------VFNSVISAYSKAGDMTPAMEML 396
S++ L K + A TL S ++ P + VF+++ISAY +G A++
Sbjct: 140 SLVSFLVSRKGTNSASTLFSSILRTMPRHHHHHHSVGLVFDALISAYVDSGFTPDAVQCF 199
Query: 397 KL--------------------MRSR-----------------GLKPDVYTYTGLMSGYA 419
+L +R R G P +Y + LM G+
Sbjct: 200 RLVTKNKFPVPIRGCENLLRRVVRLRPVEIERSWALYLEVLDSGYPPKIYFFNVLMHGFC 259
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
G + A + +E K R + V+++TLI G CK + + +L M+ GV P+V
Sbjct: 260 KAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVF 319
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++ LI LC K L ++M +GL NG+T
Sbjct: 320 TFSALINGLC-KEGRLDEGSLLFDEMCGRGLVPNGVT 355
>gi|357448559|ref|XP_003594555.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483603|gb|AES64806.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 161/356 (45%), Gaps = 38/356 (10%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I + K GK + +F + G N Y IEAL++ ++ D A + KM+E G
Sbjct: 264 MIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNTMIEALAKGRMADKAVLLFSKMVENG 323
Query: 263 SLPD--------------------------SEKV--GKIISWFCKG----GKAKEAHVVY 290
P+ S+K +I ++F + G + EAH ++
Sbjct: 324 CQPNEFTYSVLLNVLVAEGQLNKLDNIVEMSKKYMNKQIYAYFVRTLSKLGHSSEAHRLF 383
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
+ ++ SLC + + A+D+L+ F + +++V +L R
Sbjct: 384 CNMWNVHDKGDKDAYMSMLESLCSSGKIAE-AIDLLNRFHEKCITTDTIMYNTVFTALGR 442
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+K V L KM +GPPP +N +IS+Y +AG + A+++ + + + +PDV +
Sbjct: 443 LKQVSHIHDLYEKMKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVIS 502
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
Y L++ G ++EA E ++ VTY TLI + K ++ + A L +EM
Sbjct: 503 YNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACSLFDEMI 562
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAE--KLLEDMRLKGLHLNGITRALIRAVK 524
G PN+ YN L+ CL+ RTAE L ++ +GL + IT A++ ++
Sbjct: 563 AEGCSPNLVTYNILLD--CLER-SGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQ 615
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 78/167 (46%), Gaps = 4/167 (2%)
Query: 326 LDDFSGEARKYAIK----PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
LD G +K+ ++ + +++ R++D A + M+ G FN ++
Sbjct: 172 LDRCVGLVKKWGLRFNAYSYKCLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLD 231
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
A +K + A ++ + M+ R +PD +TYT ++ G+ +E+ + + L
Sbjct: 232 ALAKDQKVDKAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTL 291
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ + Y+T+I K D A+ L ++M + G QPN Y+ L+ L
Sbjct: 292 NLIAYNTMIEALAKGRMADKAVLLFSKMVENGCQPNEFTYSVLLNVL 338
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 76/175 (43%), Gaps = 3/175 (1%)
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
+D+ V A + +D + ++ +IR + + L M+ +G
Sbjct: 235 KDQKVDKAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLI 294
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
+N++I A +K A+ + M G +P+ +TY+ L++ GQ+ + I+ +
Sbjct: 295 AYNTMIEALAKGRMADKAVLLFSKMVENGCQPNEFTYSVLLNVLVAEGQLNKLDNIVEMS 354
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
KK ++ Y +R KL A +L M +V + + D Y +++SLC
Sbjct: 355 KK---YMNKQIYAYFVRTLSKLGHSSEAHRLFCNMWNVHDKGDKDAYMSMLESLC 406
>gi|125548275|gb|EAY94097.1| hypothetical protein OsI_15870 [Oryza sativa Indica Group]
Length = 554
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 122/287 (42%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
L+ + + GK + + YG + T + +L + F +M+E G
Sbjct: 179 LVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLEMG 238
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+ P+ I CK K+A V + + P LI LC+ T +
Sbjct: 239 TPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAF 298
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
L + K + ++ +I CR + A+ LL +M+ +G P + ++I
Sbjct: 299 RLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGG 358
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ K G A E++ M+ G P++YTY ++ G+ G+++EA ++L A +
Sbjct: 359 HCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFD 418
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+TY LI +CK AL L + M + G P+++ Y LI + C
Sbjct: 419 KITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYC 465
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 144/328 (43%), Gaps = 11/328 (3%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
E++ ++A F + G+ A ++ + +G ET + + F +A V +
Sbjct: 104 EVMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDG 163
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M G PD ++ C+ GK +E + + ++ SLC++
Sbjct: 164 MTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGR 223
Query: 318 TVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
+ +F + P +++ I LC+ + V A +L +M+ G P
Sbjct: 224 -----FKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNV 278
Query: 374 AVFNSVISAYSKAGDMTPAMEM-LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
++I K G A + LKL++S KP+V+TYT ++ GY G++ A +L
Sbjct: 279 YTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLV 338
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
+ + + TY TLI G+CK FD A +L+N+MK G PN+ YN +I C K
Sbjct: 339 RMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKG 398
Query: 493 LDWRTAEKLLEDMRLKGLHLNGITRALI 520
+ A K+L +GL + IT ++
Sbjct: 399 -KIQEAYKVLRMATSQGLKFDKITYTIL 425
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 131/298 (43%), Gaps = 5/298 (1%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ K E F + + G N Y I+ L +R+ A+ V E+M+ G P+
Sbjct: 222 GRFKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTH 281
Query: 271 GKIISWFCKGGKAKEAHVVY-TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDF 329
+I CK G + A ++ L + P +I C+E + + + +L
Sbjct: 282 TTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEM-LLVRM 340
Query: 330 SGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
+ K ++++I C+ A L++KM EG P +N+VI + K G +
Sbjct: 341 VEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKI 400
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
A ++L++ S+GLK D TYT L++ + G + A ++ + +N Y +L
Sbjct: 401 QEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSL 460
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC---LKALDWRTAEKLLED 504
I YC+ + + + K ++ +G+ P Y +I C + R E+++++
Sbjct: 461 ISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTMALRVFERMVQN 518
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 115/261 (44%), Gaps = 2/261 (0%)
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL-PDSEKVGK 272
K AF V + G N T+ I+ L + + A+ + K+I++ S P+
Sbjct: 260 KQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTV 319
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
+I +C+ GK A ++ E+ + P + LI C+ + A ++++ E
Sbjct: 320 MIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGG-SFDRAFELMNKMKQE 378
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
I +++VI C+ + A +L S+G + +I+ + K G +T A
Sbjct: 379 GFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYA 438
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
+++ M G PD+ YT L+S Y QMEE+ + ++ + TY ++I G
Sbjct: 439 LDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAG 498
Query: 453 YCKLEEFDCALKLLNEMKDVG 473
YCK+ AL++ M G
Sbjct: 499 YCKVGRSTMALRVFERMVQNG 519
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 124/311 (39%), Gaps = 27/311 (8%)
Query: 133 DFVLKVLE--TPLVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKE-IGE 189
+F ++LE TP N+V + W+ D L K ++ V + +++E +G
Sbjct: 229 EFFRRMLEMGTP----PNVVNYTAWI-----DGLCK-------RRYVKQAFHVLEEMVGR 272
Query: 190 KEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF---GDYGCVANQETYYFTIEALSRRK 246
K V LI K+G + AF +F K Y N TY I R
Sbjct: 273 GLKP--NVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYK--PNVHTYTVMIGGYCREG 328
Query: 247 IFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVA 306
A + +M+E G P++ +I CKGG A + +++ P
Sbjct: 329 KLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYN 388
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
+I C++ + ++ A +L + + K+ ++ +I C+ + A L +M+
Sbjct: 389 AVIDGFCKKGK-IQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVE 447
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
G P + S+IS Y + M + + GL P TYT +++GY G+
Sbjct: 448 NGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTM 507
Query: 427 ACEILNEAKKN 437
A + +N
Sbjct: 508 ALRVFERMVQN 518
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 166/359 (46%), Gaps = 16/359 (4%)
Query: 191 EKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDW 250
E G+ V N L++ K GK A ++++ G N +Y I R+ +
Sbjct: 243 ESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINA 302
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A V ++M++ G P++ ++ + K G + A ++ ++ + P + + +I
Sbjct: 303 ACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIK 362
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
LC+ + + D+ + F + P++++I + +++ A + +M G
Sbjct: 363 GLCKAGRSFE-GRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGIT 421
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P + S+I + K ++ A+++L M+ +GLK D+ Y L+ G+ M+ A E+
Sbjct: 422 PSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHEL 481
Query: 431 LNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
LNE + + LSP Y+++I G+ + + A+ L +M + G+ ++ Y LI L
Sbjct: 482 LNELRG--AGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGL 539
Query: 489 -----CLKALDWRT---AEKLLEDMRLKGLHLNGI-TRALIRAVKELEEDAIENGEALV 538
L A D T ++ +L D R + +NG+ + +++ ED NG+ ++
Sbjct: 540 LKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDM--NGKNMI 596
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 163/380 (42%), Gaps = 39/380 (10%)
Query: 143 LVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNE 202
L L +++V K + V +L+K C + L + + E G V T +L
Sbjct: 130 LRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKV-TYSVL-- 186
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
I K G + AFE +++ G ++ + +E + + + A+++ +E+G
Sbjct: 187 -IDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESG 245
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE---TV 319
L + ++SW CK GK EA ++ K + P +I C++D
Sbjct: 246 -LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAAC 304
Query: 320 KLALDMLDD-FSGEARKYAI------------------------------KPFSSVIRSL 348
K+ +MLD+ F+ A + I +I+ L
Sbjct: 305 KVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGL 364
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
C+ + L +K +S+G P +N++I + K G++ A + + M G+ P
Sbjct: 365 CKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPST 424
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNE 468
TYT L+ G+ G ++ A ++LN+ K+ ++ Y TLI G+CK + A +LLNE
Sbjct: 425 VTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNE 484
Query: 469 MKDVGVQPNVDEYNKLIQSL 488
++ G+ PN YN +I
Sbjct: 485 LRGAGLSPNRFIYNSMITGF 504
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 129/288 (44%), Gaps = 1/288 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
L +I K G+ ++FNKF G V Y I+ + + A +V +M
Sbjct: 357 LGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMC 416
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
E G P + +I FCKG A + + K + LI C+ + +
Sbjct: 417 EVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRD-M 475
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
K A ++L++ G ++S+I M +V A L KM++EG P + S+
Sbjct: 476 KSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSL 535
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I K+G + A ++ M S+G+ PD +T L++G N GQ E A +IL + +
Sbjct: 536 IDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNM 595
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
S + Y+TLI G+ K A +L +EM D G+ P+ Y+ L+
Sbjct: 596 IPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 643
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 116/256 (45%), Gaps = 5/256 (1%)
Query: 266 DSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDM 325
D E + C + A + R PP+ +I++ C ++ V AL +
Sbjct: 74 DQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITA-CVKEGNVAEALRL 132
Query: 326 LDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSK 385
DD + + +S+++ C ++ A L++++ G P ++ +I K
Sbjct: 133 KDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCK 192
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV- 444
G++ A E M+++G++ VY+ ++ GY + A + N+A + S L+ V
Sbjct: 193 NGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALE--SGLANVF 250
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLED 504
T++TL+ CK + + A L +E+ G+ PNV YN +I C K + A K+ ++
Sbjct: 251 TFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKD-NINAACKVYKE 309
Query: 505 MRLKGLHLNGITRALI 520
M G N +T ++
Sbjct: 310 MLDNGFTPNAVTFTIL 325
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 94/256 (36%), Gaps = 36/256 (14%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I F K G A V+ + + G + TY I+ + D A + M
Sbjct: 393 NTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKR 452
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G D + G +I FCK K AH + R + P + + +I+ + V+
Sbjct: 453 KGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGF-KNMNNVE 511
Query: 321 LALDMLDDFSGEARKYAIKPFSSVI----------------------------------- 345
A+D+ E +K ++S+I
Sbjct: 512 EAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLI 571
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
LC A+ +L M + P ++N++I+ + K G++ A + M RGL
Sbjct: 572 NGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLV 631
Query: 406 PDVYTYTGLMSGYANG 421
PD TY L++G G
Sbjct: 632 PDNITYDILVNGKFKG 647
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 135/290 (46%), Gaps = 3/290 (1%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I + G AF++ + G + TY + L + ++ + + M+
Sbjct: 235 NSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVA 294
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G + +IS C+ GK +E + ++K + P LI++LC+E V
Sbjct: 295 RGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGR-VD 353
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
LA+++LD + I +++++ LC+ K A ++ K+ G P + +NS+
Sbjct: 354 LAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMF 413
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
SA G A+ M+ M +G+ PD TY L+S G ++EA E+L + + S
Sbjct: 414 SALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSE 473
Query: 441 LSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
P V+Y+ ++ G CK+ A+++L M D G +PN Y LI+ +
Sbjct: 474 CKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGI 523
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 140/347 (40%), Gaps = 6/347 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+A++ C + Y + D +K G + N LI G +A E N
Sbjct: 130 NAIITGFCRANRIDSAYQVLDRMKNKGFSPD----IVTYNILIGSLCSRGMLDSALEFKN 185
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ C TY IEA + D A + ++M+E PD II C+ G
Sbjct: 186 QLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREG 245
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
A + + K P L+ L + + + +++ D + + +
Sbjct: 246 YVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKW-EAGYELMSDMVARGCEANVVTY 304
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
S +I S+CR V LL M +G P ++ +I+A K G + A+E+L +M S
Sbjct: 305 SVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMIS 364
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G PD+ Y +++ + +EA I + + + +Y+++
Sbjct: 365 DGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVR 424
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLK 508
AL ++ EM D GV P+ YN LI LC + A +LL DM ++
Sbjct: 425 ALGMILEMLDKGVDPDGITYNSLISCLCRDGM-VDEAIELLVDMEME 470
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 135/323 (41%), Gaps = 21/323 (6%)
Query: 174 KKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQE 233
+ +Y L +V + G K VL ++++ L + K + G +A
Sbjct: 74 NESLYFLRHLVNK-GHKPDVVLCTKLIHGLFT-SKTIDKAIQVMHILENHGHPDLIA--- 128
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
Y I R D A+ V ++M G PD +I C G A
Sbjct: 129 -YNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQL 187
Query: 294 REKKMYPPQSVVAFLI-SSLCQE--DETVKLALDMLDDFSGEARKYAIKP----FSSVIR 346
++ P LI ++L Q DE +KL +ML+ ++P ++S+IR
Sbjct: 188 LKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLE--------INLQPDMFTYNSIIR 239
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
+CR V A ++S + S+G P +N ++ G E++ M +RG +
Sbjct: 240 GMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEA 299
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
+V TY+ L+S G++EE +L + KK + Y LI CK D A+++L
Sbjct: 300 NVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVL 359
Query: 467 NEMKDVGVQPNVDEYNKLIQSLC 489
+ M G P++ YN ++ LC
Sbjct: 360 DVMISDGCVPDIVNYNTILACLC 382
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 122/269 (45%), Gaps = 6/269 (2%)
Query: 272 KIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSG 331
K +S CK G E+ K P + LI L +T+ A+ ++
Sbjct: 62 KSLSRSCKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTS-KTIDKAIQVMHILEN 120
Query: 332 EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
I ++++I CR + A +L +M ++G P +N +I + G +
Sbjct: 121 HGHPDLIA-YNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDS 179
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
A+E + KP V TYT L+ G ++EA ++L+E + + + TY+++IR
Sbjct: 180 ALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIR 239
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH 511
G C+ D A ++++ + G P+V YN L++ L L W +L+ DM +G
Sbjct: 240 GMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGL-LNQGKWEAGYELMSDMVARGCE 298
Query: 512 LNGITRA-LIRAVKELEEDAIENGEALVE 539
N +T + LI +V + +E G L++
Sbjct: 299 ANVVTYSVLISSV--CRDGKVEEGVGLLK 325
>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like, partial [Cucumis sativus]
Length = 602
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 127/297 (42%), Gaps = 11/297 (3%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V I +I K G K AF +F++ + V N TY I + A +
Sbjct: 293 VYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVN 352
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ-- 314
M G + ++ +CK G EA + + ++K + S C+
Sbjct: 353 DMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSN 412
Query: 315 -EDETVKLALDMLDDFSGEARKYA--IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
+E +L L M E R A + FS +I C+ ++ A+ L M +G P
Sbjct: 413 RREEAKRLLLTM------EERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAP 466
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+N+ I Y K G M A +++ M+ RGL PD YTYT L+ G G ++ A E+
Sbjct: 467 SVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELF 526
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
NE + + VTY +I G K D A KL +EM G+ P+ Y+ LI SL
Sbjct: 527 NEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASL 583
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 121/280 (43%), Gaps = 37/280 (13%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
N TY IE SR + A + ++M++ G PD II+W CK G K A V++
Sbjct: 257 NVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLF 316
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
E+++ P LI+ C+ E
Sbjct: 317 DEMTERRLVPNAYTYGALINGACKAGE--------------------------------- 343
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ A+ +++ M S+G +FN+++ Y K G + A+ + +M+ +G + D +T
Sbjct: 344 ---MKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFT 400
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
+ SG+ + EEA +L ++ + V++ LI YCK + F A +L M+
Sbjct: 401 CNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVME 460
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
G P+V YN I+ C K A KL+ +M+ +GL
Sbjct: 461 KKGKAPSVVTYNAFIERYCKKG-KMEEAYKLINEMQERGL 499
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 103/213 (48%), Gaps = 2/213 (0%)
Query: 308 LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
++ LC++ E V+ A ++D+ + K ++ +++++ +KDV G +LS M
Sbjct: 194 VVDGLCKKGEVVR-AKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKN 252
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
+ +I YS++ + A ++ M +G++PDVY YT +++ G M+ A
Sbjct: 253 VVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRA 312
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
+ +E + + TY LI G CK E A ++N+M+ GV N +N L+
Sbjct: 313 FVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDG 372
Query: 488 LCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
C K + A +L M+ KG ++ T +I
Sbjct: 373 YCKKGM-IDEALRLQNIMQQKGFEIDAFTCNII 404
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 94/185 (50%), Gaps = 1/185 (0%)
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
Y + ++ +I R + A+ L +M+ +G P ++ S+I+ K G+M A +
Sbjct: 256 YNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVL 315
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
M R L P+ YTY L++G G+M+ A ++N+ + ++ V ++TL+ GYCK
Sbjct: 316 FDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCK 375
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
D AL+L N M+ G + + N + C ++ A++LL M +G+ N +
Sbjct: 376 KGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFC-RSNRREEAKRLLLTMEERGVAPNVV 434
Query: 516 TRALI 520
+ +++
Sbjct: 435 SFSIL 439
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 120/282 (42%), Gaps = 5/282 (1%)
Query: 169 CSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGC 228
C K + L+D E+ E+ + V LI K G+ KAA + N G
Sbjct: 304 CKFGNMKRAFVLFD---EMTER-RLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGV 359
Query: 229 VANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHV 288
N+ + ++ ++ + D A + M + G D+ I S FC+ + +EA
Sbjct: 360 DVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKR 419
Query: 289 VYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSL 348
+ E+ + P + LI C+E + A + + + ++ +++ I
Sbjct: 420 LLLTMEERGVAPNVVSFSILIDIYCKEQNFAE-ARRLFKVMEKKGKAPSVVTYNAFIERY 478
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
C+ + A L+++M G P + S+I +G++ A+E+ M GL +V
Sbjct: 479 CKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNV 538
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
TYT ++SG + G+ +EA ++ +E K Y +LI
Sbjct: 539 VTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLI 580
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 178/402 (44%), Gaps = 30/402 (7%)
Query: 107 VLSLLQSSVDGYLESS---LDSFELDLHEDFVLKVLETPLVLGENLVCFFKWV------- 156
+L +++ DG+ E + L F L+ D V+++L + L E V FF W
Sbjct: 110 ILDAVRNCDDGFGEKTHIVLRQFRQKLNPDLVVEIL-SFLKSPELCVKFFLWAGRQIGYD 168
Query: 157 -TSGVVDALLKAICSSVGKKEVY--ALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKG 213
T V ALL V ++ Y + ++EI +K VL ++LN LI + G
Sbjct: 169 HTPAVYIALL-----DVFERGSYDRVPEEFLREIRGDDKEVLG-KLLNVLIRKCCRNGLW 222
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
A E + D+G + TY ++ R D A V +M E G D +G
Sbjct: 223 NVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFF 282
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEA 333
CK GK +EA +L ++ P + +IS LC E + A+D L+ +
Sbjct: 283 AQALCKVGKWREA---LSLIEKEDFVPNTILYNKMISGLC-EASFFEEAMDFLNRMRSTS 338
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
++ + ++ K + K +LS MI+EG P +FNS++ AY K+ D + A
Sbjct: 339 CIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAY 398
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQM------EEACEILNEAKKNHSRLSPVTYH 447
++LK M KP Y L+ +GG++ E A + NE + L+ V
Sbjct: 399 KLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVV 458
Query: 448 TLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ R C +F+ A K+++EM G P+ Y+++I LC
Sbjct: 459 SFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLC 500
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 143/336 (42%), Gaps = 18/336 (5%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
+E+I + + AF +F + G V + TY I+ S+ I A + ++M+
Sbjct: 493 SEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVR 552
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P +I + K K A+ ++ L K +P LI C+ K
Sbjct: 553 DGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEK 612
Query: 321 LALDMLDDFSGEA------------RKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKM 364
A + G+A A KP + +++ LC+ V A+ LL M
Sbjct: 613 -ACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETM 671
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
+G P V++++I + KA + A E+ M G P+VYTY+ L+ ++
Sbjct: 672 FVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRL 731
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
+ ++L++ +N + V Y +I G K+ + D A KL+ M++ G +PNV Y +
Sbjct: 732 DLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAM 791
Query: 485 IQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
I KA +L +M KG N +T ++
Sbjct: 792 IDGFG-KAGKVDKCLELFREMGSKGCAPNFVTYTVL 826
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 133/329 (40%), Gaps = 12/329 (3%)
Query: 166 KAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGD 225
+A+C VGK W + EKE V + N++I+ + + A + N+
Sbjct: 284 QALCK-VGK------WREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRS 336
Query: 226 YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKE 285
C+ N +TY + +K + MI G P ++ +CK
Sbjct: 337 TSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSY 396
Query: 286 AHVVYTLAREKKMYPPQSVVAFLISSLCQEDE-----TVKLALDMLDDFSGEARKYAIKP 340
A+ + + + P V LI S+C E T +LA ++
Sbjct: 397 AYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVN 456
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
S R LC A ++ +M+ G P + ++ VI A + A + K M+
Sbjct: 457 VVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMK 516
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G+ PDVYTYT L+ ++ G +++A L+E ++ + VTY TLI Y K ++
Sbjct: 517 GTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVS 576
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
A +L M G PNV Y LI C
Sbjct: 577 VANELFELMIAKGCFPNVITYTALIDGYC 605
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 135/321 (42%), Gaps = 20/321 (6%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI FSK G K A ++ GC TY I A + K A + E MI G
Sbjct: 530 LIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKG 589
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR------EKKMY----------PPQSVVA 306
P+ +I +CK G ++A +Y R + MY P
Sbjct: 590 CFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYG 649
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
L+ LC+ + VK A D+L+ + + + ++I C+ + A+ + KM+
Sbjct: 650 ALVDGLCKAHK-VKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVE 708
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
G P ++S+I K + +++L M P++ YT ++ G + + +E
Sbjct: 709 HGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDE 768
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A +++ ++ + + VTY +I G+ K + D L+L EM G PN Y LI
Sbjct: 769 AYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLIN 828
Query: 487 SLCLKA-LDWRTAEKLLEDMR 506
C LD A LLE+M+
Sbjct: 829 HCCATGHLD--EAYALLEEMK 847
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 114/258 (44%), Gaps = 3/258 (1%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
N TY ++ L + A + E M G P++ +I FCK K EA V+
Sbjct: 644 NVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVF 703
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
E P + LI L + D+ + L L +L + I ++ +I L +
Sbjct: 704 HKMVEHGYNPNVYTYSSLIDRLFK-DKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSK 762
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ A L+ M +G P + ++I + KAG + +E+ + M S+G P+ T
Sbjct: 763 VAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVT 822
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
YT L++ G ++EA +L E K+ + +Y +I GY + EF +L LL E++
Sbjct: 823 YTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKR--EFILSLGLLEEVE 880
Query: 471 DVGVQPNVDEYNKLIQSL 488
G P + Y LI +
Sbjct: 881 KNGSAPIILLYKVLIDNF 898
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 101/241 (41%), Gaps = 13/241 (5%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
+ I E+I SK+ K A+++ + GC N TY I+ + D +
Sbjct: 749 NIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELF 808
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+M G P+ +I+ C G EA+ + L K+ Y P+ V SS C+
Sbjct: 809 REMGSKGCAPNFVTYTVLINHCCATGHLDEAYAL--LEEMKQTYWPKHV-----SSYCKV 861
Query: 316 DETVK----LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
E K L+L +L++ I + +I + + + A L ++IS
Sbjct: 862 IEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSM 921
Query: 372 G--NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
++ S+I ++S A + A E+ M G+ PD+ T+ L+ G + EEA +
Sbjct: 922 AAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQ 981
Query: 430 I 430
+
Sbjct: 982 L 982
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 141/308 (45%), Gaps = 8/308 (2%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
+N + L + G+ A ++F + CV N+ TY I L + D A+ + ++M
Sbjct: 1 MNCALNLLVRAGQHGQAVQLFR---EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMR 57
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G P +I CK G+ +A + K P L+ +L + V
Sbjct: 58 DRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGR-V 116
Query: 320 KLALDMLDDFSGEARKYA-IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+ A + + ++ + +++VI LC+ + A LL M G P ++
Sbjct: 117 EEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSV 176
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
++ KAG +L+ M RG +PDV Y L++G +++EA E++ ++
Sbjct: 177 LVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSG 236
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA-LDWRT 497
+ VTY++L+ +C+ ++ D A +L+ M + G P+V YN +I LC A LD
Sbjct: 237 CYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLD--D 294
Query: 498 AEKLLEDM 505
A+ LL+ M
Sbjct: 295 AQALLKQM 302
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 142/327 (43%), Gaps = 13/327 (3%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K GK A+E+ ++ D G + I+ L + F A + + T
Sbjct: 36 LIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTK 95
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVY-TLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
PD ++ K G+ +EA ++ ++ + P +I+ LC+ D +
Sbjct: 96 CTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCK-DGKLDR 154
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A+++LD + + +S ++ LC+ TLL +M G P ++N++++
Sbjct: 155 AIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLN 214
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
K+ + A+E+++LM G P V TY LM + Q++ A ++ +
Sbjct: 215 GLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPP 274
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT---- 497
+ Y+T+I G C+ D A LL +M P+V Y+ +I LC DWR
Sbjct: 275 DVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLC---KDWRVDADW 331
Query: 498 ----AEKLLEDMRLKGLHLNGITRALI 520
A ++LE M+ G N T A++
Sbjct: 332 KLEAACEILEMMKQTGCPPNAGTYAVV 358
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 137/336 (40%), Gaps = 12/336 (3%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ LL +C S E L ++ G TV N L+ LF + + AF +
Sbjct: 210 NTLLNGLCKSRRLDEALELVQLMIRSGCYP----TVVTYNSLMELFCRSKQVDRAFRLIQ 265
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK-- 279
+ GC + Y I L R D A ++ ++M+ +PD II CK
Sbjct: 266 VMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDW 325
Query: 280 ----GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
K + A + + ++ P A +I LC+ ++ + AL +L
Sbjct: 326 RVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKS-QQALALLRRMIDSEVV 384
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+ FS VI SLC+ D+ A + M P + ++I SK G++ A+ +
Sbjct: 385 PDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRV 444
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
+LM +P V TY ++ G G++EEA ++ +Y LIRG C+
Sbjct: 445 FELM-VESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCR 503
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
+ + A +L ++ G V YN L+ LC K
Sbjct: 504 VSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKK 539
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 127/298 (42%), Gaps = 6/298 (2%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V + N L+ K + A E+ GC TY +E R K D A+ + +
Sbjct: 206 VIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQ 265
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE- 315
M E G PD +I+ C+ + +A + + P + +I LC++
Sbjct: 266 VMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDW 325
Query: 316 ----DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
D ++ A ++L+ ++ VI LCR + A LL +MI P
Sbjct: 326 RVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVP 385
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+ F+ VI + K+ D+ A ++ +M R KP+ Y L+ G + GG++++A +
Sbjct: 386 DLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF 445
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
E R TY++++ G C + + A++++ M P+ Y LI+ LC
Sbjct: 446 -ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLC 502
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 111/256 (43%), Gaps = 16/256 (6%)
Query: 228 CVANQETYYFTIEALSR--RKIFDW----AWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
CV + TY I+ L + R DW A + E M +TG P++ +I C+
Sbjct: 307 CVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRAR 366
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP- 340
K+++A + + ++ P S + +I SLC+ + LD G + KP
Sbjct: 367 KSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHD-----LDAAYKIFGMMSERECKPN 421
Query: 341 ---FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
++++I L + +V A + M+ E PG A +NSV+ G + A+ M++
Sbjct: 422 PVAYAALIDGLSKGGEVDKAVRVFELMV-ESFRPGVATYNSVLDGLCGVGRIEEAVRMVE 480
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M + PD +Y L+ G +EEA E+ + + Y+ L+ CK +
Sbjct: 481 GMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKK 540
Query: 458 EFDCALKLLNEMKDVG 473
A + N++ + G
Sbjct: 541 RLSDAHGVANKLIEAG 556
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 126/294 (42%), Gaps = 9/294 (3%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + G+ A + + GC N TY +EA+ R F+ A +V ++M G
Sbjct: 149 LIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKG 208
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P+ II+ C+ G+ +A + P L+ LC
Sbjct: 209 CTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKR----- 263
Query: 323 LDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
D +++ E + P F +IR CR V A +L +M G + N
Sbjct: 264 WDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNI 323
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
VI++ K G + A ++L M S G PD +YT ++ G + ++A E+LNE +N+
Sbjct: 324 VINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNN 383
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
+ VT++T I C+ + A+ L+ +M + G V YN L+ C++
Sbjct: 384 CPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQG 437
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 139/304 (45%), Gaps = 13/304 (4%)
Query: 191 EKGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
E G T + N +I K G+ AF++ N G YGC + +Y ++ L R + +D
Sbjct: 311 EHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWD 370
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A + +M+ P+ I C+ G ++A ++ E L+
Sbjct: 371 DAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALV 430
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMI 365
+ C + + AL++ R KP +++++ LC + + GA L+++M+
Sbjct: 431 NGFCVQGH-IDSALELF-------RSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEML 482
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
PP FN ++S + + G + A+E+++ M G P++ TY L+ G E
Sbjct: 483 RGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSE 542
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
+A E+L+ +T+ ++I K + + A++L + ++D+G++P YNK++
Sbjct: 543 DALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKIL 602
Query: 486 QSLC 489
LC
Sbjct: 603 LGLC 606
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 137/316 (43%), Gaps = 5/316 (1%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+A + + G AA + G + TY I L R A S+ + M+
Sbjct: 115 NTLVAGYCRYGHLDAARRLI---GSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLR 171
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ ++ C+ ++A V R K P +I+ +C+E V
Sbjct: 172 RGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGR-VD 230
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A ++L+ + ++++++ LC K + L ++M+ + P F+ +I
Sbjct: 231 DARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLI 290
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ + G + A+++L+ M G + +++ G++++A ++LN+
Sbjct: 291 RFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCN 350
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
++Y T+++G C+ E +D A +LLNEM PN +N I LC K L A
Sbjct: 351 PDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGL-IEQAIM 409
Query: 501 LLEDMRLKGLHLNGIT 516
L+E M G + +T
Sbjct: 410 LIEQMSEHGCTVGVVT 425
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 132/305 (43%), Gaps = 15/305 (4%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
I L RR A V +GS D +++ +C+ G A L +
Sbjct: 83 IRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAAR---RLIGSMPV 139
Query: 299 YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
P LI LC V AL +LDD + + ++ ++ ++CR A
Sbjct: 140 APDAYTYTPLIRVLCDRGR-VADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAM 198
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+L +M ++G P +N +I+ + G + A E+L + S G +PD +YT L+ G
Sbjct: 199 AVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGL 258
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
+ ++ E+ E + + + VT+ LIR +C+ + A+++L +M + G N
Sbjct: 259 CASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNT 318
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-----RALIRA-----VKELEE 528
N +I S+C K A KLL DM G + + I+ + L RA KEL
Sbjct: 319 TLCNIVINSIC-KQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLN 377
Query: 529 DAIEN 533
+ + N
Sbjct: 378 EMVRN 382
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 89/187 (47%), Gaps = 9/187 (4%)
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMIS-EGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
A P S+ +R L +D+ GA L+ + S +G P + +I + G + A +
Sbjct: 39 APNPASAHLRRLIAREDLAGAVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARV 98
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGY 453
L+ G DV+ Y L++GY G ++ A ++ ++P TY LIR
Sbjct: 99 LRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMP-----VAPDAYTYTPLIRVL 153
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
C AL LL++M G QPNV Y L++++C + + A +L++MR KG N
Sbjct: 154 CDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNS-GFEQAMAVLDEMRAKGCTPN 212
Query: 514 GITRALI 520
+T +I
Sbjct: 213 IVTYNVI 219
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/244 (18%), Positives = 98/244 (40%), Gaps = 44/244 (18%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEI--GEKEKGVLTVEILNELIALFSKLGKGKAAFEVF 220
LL +C++ + + ++V E+ G+ V+T N L++ F + G + A E+
Sbjct: 460 TLLTGLCNA---ERLDGAAELVAEMLRGDCPPNVVT---FNVLVSFFCQKGFLEEAIELV 513
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ ++GC N TY ++ +++ + A + ++ G PD II K
Sbjct: 514 EQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKE 573
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
+ +EA ++ + ++ M P V
Sbjct: 574 DRIEEAVQLFHVVQDIGMRPKAVV------------------------------------ 597
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++ ++ LC+ ++ A + M+S G P + + +I + G + A ++L ++
Sbjct: 598 YNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLC 657
Query: 401 SRGL 404
SRG+
Sbjct: 658 SRGV 661
>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cucumis sativus]
Length = 606
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 127/297 (42%), Gaps = 11/297 (3%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V I +I K G K AF +F++ + V N TY I + A +
Sbjct: 297 VYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVN 356
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ-- 314
M G + ++ +CK G EA + + ++K + S C+
Sbjct: 357 DMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSN 416
Query: 315 -EDETVKLALDMLDDFSGEARKYA--IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
+E +L L M E R A + FS +I C+ ++ A+ L M +G P
Sbjct: 417 RREEAKRLLLTM------EERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAP 470
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+N+ I Y K G M A +++ M+ RGL PD YTYT L+ G G ++ A E+
Sbjct: 471 SVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELF 530
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
NE + + VTY +I G K D A KL +EM G+ P+ Y+ LI SL
Sbjct: 531 NEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASL 587
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 121/280 (43%), Gaps = 37/280 (13%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
N TY IE SR + A + ++M++ G PD II+W CK G K A V++
Sbjct: 261 NVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLF 320
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
E+++ P LI+ C+ E
Sbjct: 321 DEMTERRLVPNAYTYGALINGACKAGE--------------------------------- 347
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ A+ +++ M S+G +FN+++ Y K G + A+ + +M+ +G + D +T
Sbjct: 348 ---MKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFT 404
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
+ SG+ + EEA +L ++ + V++ LI YCK + F A +L M+
Sbjct: 405 CNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVME 464
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
G P+V YN I+ C K A KL+ +M+ +GL
Sbjct: 465 KKGKAPSVVTYNAFIERYCKKG-KMEEAYKLINEMQERGL 503
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 103/213 (48%), Gaps = 2/213 (0%)
Query: 308 LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
++ LC++ E V+ A ++D+ + K ++ +++++ +KDV G +LS M
Sbjct: 198 VVDGLCKKGEVVR-AKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKN 256
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
+ +I YS++ + A ++ M +G++PDVY YT +++ G M+ A
Sbjct: 257 VVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRA 316
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
+ +E + + TY LI G CK E A ++N+M+ GV N +N L+
Sbjct: 317 FVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDG 376
Query: 488 LCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
C K + A +L M+ KG ++ T +I
Sbjct: 377 YCKKGM-IDEALRLQNIMQQKGFEIDAFTCNII 408
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 94/185 (50%), Gaps = 1/185 (0%)
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
Y + ++ +I R + A+ L +M+ +G P ++ S+I+ K G+M A +
Sbjct: 260 YNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVL 319
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
M R L P+ YTY L++G G+M+ A ++N+ + ++ V ++TL+ GYCK
Sbjct: 320 FDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCK 379
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
D AL+L N M+ G + + N + C ++ A++LL M +G+ N +
Sbjct: 380 KGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFC-RSNRREEAKRLLLTMEERGVAPNVV 438
Query: 516 TRALI 520
+ +++
Sbjct: 439 SFSIL 443
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 120/282 (42%), Gaps = 5/282 (1%)
Query: 169 CSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGC 228
C K + L+D E+ E+ + V LI K G+ KAA + N G
Sbjct: 308 CKFGNMKRAFVLFD---EMTER-RLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGV 363
Query: 229 VANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHV 288
N+ + ++ ++ + D A + M + G D+ I S FC+ + +EA
Sbjct: 364 DVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKR 423
Query: 289 VYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSL 348
+ E+ + P + LI C+E + A + + + ++ +++ I
Sbjct: 424 LLLTMEERGVAPNVVSFSILIDIYCKEQNFAE-ARRLFKVMEKKGKAPSVVTYNAFIERY 482
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
C+ + A L+++M G P + S+I +G++ A+E+ M GL +V
Sbjct: 483 CKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNV 542
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
TYT ++SG + G+ +EA ++ +E K Y +LI
Sbjct: 543 VTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLI 584
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 141/308 (45%), Gaps = 8/308 (2%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
+N + L + G+ A ++F + CV N+ TY I L + D A+ + ++M
Sbjct: 1 MNCALNLLVRAGQHGQAVQLFR---EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMR 57
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G P +I CK G+ +A + K P L+ +L + V
Sbjct: 58 DRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGR-V 116
Query: 320 KLALDMLDDFSGEARKYA-IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+ A + + ++ + +++VI LC+ + A LL M G P ++
Sbjct: 117 EEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSV 176
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
++ KAG +L+ M RG +PDV Y L++G +++EA E++ ++
Sbjct: 177 LVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSG 236
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA-LDWRT 497
+ VTY++L+ +C+ ++ D A +L+ M + G P+V YN +I LC A LD
Sbjct: 237 CYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLD--D 294
Query: 498 AEKLLEDM 505
A+ LL+ M
Sbjct: 295 AQALLKQM 302
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 141/327 (43%), Gaps = 13/327 (3%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K GK A+E+ ++ D G + I L + F A + + T
Sbjct: 36 LIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTK 95
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVY-TLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
PD ++ K G+ +EA ++ ++ + P +I+ LC+ D +
Sbjct: 96 CTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCK-DGKLDR 154
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A+++LD + + +S ++ LC+ TLL +M G P ++N++++
Sbjct: 155 AIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLN 214
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
K+ + A+E+++LM G P V TY LM + Q++ A ++ +
Sbjct: 215 GLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPP 274
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT---- 497
+ Y+T+I G C+ D A LL +M P+V Y+ +I LC DWR
Sbjct: 275 DVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLC---KDWRVDADW 331
Query: 498 ----AEKLLEDMRLKGLHLNGITRALI 520
A ++LE M+ G N T A++
Sbjct: 332 KLEAACEILEMMKQTGCPPNAGTYAVV 358
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 137/336 (40%), Gaps = 12/336 (3%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ LL +C S E L ++ G TV N L+ LF + + AF +
Sbjct: 210 NTLLNGLCKSRRLDEALELVQLMIRSGCYP----TVVTYNSLMELFCRSKQVDRAFRLIQ 265
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK-- 279
+ GC + Y I L R D A ++ ++M+ +PD II CK
Sbjct: 266 VMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDW 325
Query: 280 ----GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
K + A + + ++ P A +I LC+ ++ + AL +L
Sbjct: 326 RVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKS-QQALALLRRMIDSEVV 384
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+ FS VI SLC+ D+ A + M P + ++I SK G++ A+ +
Sbjct: 385 PDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRV 444
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
+LM +P V TY ++ G G++EEA ++ +Y LIRG C+
Sbjct: 445 FELM-VESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCR 503
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
+ + A +L ++ G V YN L+ LC K
Sbjct: 504 VSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKK 539
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 127/298 (42%), Gaps = 6/298 (2%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V + N L+ K + A E+ GC TY +E R K D A+ + +
Sbjct: 206 VIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQ 265
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE- 315
M E G PD +I+ C+ + +A + + P + +I LC++
Sbjct: 266 VMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDW 325
Query: 316 ----DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
D ++ A ++L+ ++ VI LCR + A LL +MI P
Sbjct: 326 RVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVP 385
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+ F+ VI + K+ D+ A ++ +M R KP+ Y L+ G + GG++++A +
Sbjct: 386 DLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF 445
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
E R TY++++ G C + + A++++ M P+ Y LI+ LC
Sbjct: 446 -ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLC 502
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 111/256 (43%), Gaps = 16/256 (6%)
Query: 228 CVANQETYYFTIEALSR--RKIFDW----AWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
CV + TY I+ L + R DW A + E M +TG P++ +I C+
Sbjct: 307 CVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRAR 366
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP- 340
K+++A + + ++ P S + +I SLC+ + LD G + KP
Sbjct: 367 KSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHD-----LDAAYKIFGMMSERECKPN 421
Query: 341 ---FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
++++I L + +V A + M+ E PG A +NSV+ G + A+ M++
Sbjct: 422 PVAYAALIDGLSKGGEVDKAVRVFELMV-ESFRPGVATYNSVLDGLCGVGRIEEAVRMVE 480
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M + PD +Y L+ G +EEA E+ + + Y+ L+ CK +
Sbjct: 481 GMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKK 540
Query: 458 EFDCALKLLNEMKDVG 473
A + N++ + G
Sbjct: 541 RLSDAHGVANKLIEAG 556
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 170/356 (47%), Gaps = 7/356 (1%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
L A+ S++G+ L V + KE TV + LI+ + + G A +VF+
Sbjct: 192 LASAMISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSM 251
Query: 224 GDYGCVANQETYYFTIEALSRRKI-FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + N TY I+A + + F + + M+ G PD +++ +GG
Sbjct: 252 KSNGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGL 311
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
+ A +++ +K + L+ ++C+ + + LA +++ + + + +S
Sbjct: 312 WEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQ-MDLAFEIMSEMPTKNILPNVVTYS 370
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
++I ++ + A + ++M G +N+++S Y+K G A+++ K M +
Sbjct: 371 TMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENA 430
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFD 460
G++ DV TY L++GY + +E + E K+ R+SP +TY TLI Y K +
Sbjct: 431 GIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKR--GRVSPNLLTYSTLIDVYSKGGLYK 488
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A+++ E K G++ +V Y+ LI +LC L ++ LL++M +G+ N +T
Sbjct: 489 EAMEVFREFKQAGLKADVVLYSALIDALCKNGL-VESSVTLLDEMTKEGIRPNVVT 543
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 103/244 (42%), Gaps = 38/244 (15%)
Query: 279 KGGKAKEAHVV-YTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
+G AK + + RE + + +IS+L + + V+LA + D E
Sbjct: 166 RGDSAKAVRCFEFAVRRESGKNEQGKLASAMISTLGRLGK-VELAKAVFDTALKEGYGKT 224
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG-DMTPAMEML 396
+ FS++I + R + A + M S G P +N+VI A K G + +E+
Sbjct: 225 VYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGVEFKKVVEIF 284
Query: 397 KLMRSRGLKP-----------------------------------DVYTYTGLMSGYANG 421
M S G++P D++TY L+ G
Sbjct: 285 DGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKG 344
Query: 422 GQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEY 481
GQM+ A EI++E + + VTY T+I GY K+ D AL + NEMK +GV + Y
Sbjct: 345 GQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSY 404
Query: 482 NKLI 485
N L+
Sbjct: 405 NTLL 408
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/370 (21%), Positives = 163/370 (44%), Gaps = 26/370 (7%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVL-TVEILNELIALFSKLGKGKAAFEVF 220
+ LL A+C G+ ++ ++I+ E+ K +L V + +I ++K+G+ A +F
Sbjct: 335 NTLLDAVCKG-GQMDL--AFEIMSEM--PTKNILPNVVTYSTMIDGYAKVGRLDDALNMF 389
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
N+ G ++ +Y + ++ F+ A VC++M G D +++ + K
Sbjct: 390 NEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQ 449
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
+ E V+ + ++ P + LI + + K A+++ +F K +
Sbjct: 450 YRYDEVRRVFEEMKRGRVSPNLLTYSTLID-VYSKGGLYKEAMEVFREFKQAGLKADVVL 508
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+S++I +LC+ V + TLL +M EG P +NS+I A+ ++ ++
Sbjct: 509 YSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAFGRSASAQCVVD------ 562
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL---- 456
D T L + ++EA E A K +R+ + C+
Sbjct: 563 ------DSGETTALQVESLSSIVVQEAIES-QAADKEDNRIIEIFGKLAAEKACEAKNSG 615
Query: 457 -EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
+E C L + +M ++ ++PNV ++ ++ + C + + A LLE++RL + G+
Sbjct: 616 KQEILCILGVFQKMHELKIKPNVVTFSAILNA-CSRCDSFEDASMLLEELRLFDNQVYGV 674
Query: 516 TRALIRAVKE 525
L+ +E
Sbjct: 675 AHGLLMGYRE 684
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 136/317 (42%), Gaps = 15/317 (4%)
Query: 148 NLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEI-LNELIAL 206
NLV + + V+DA K V K+V ++D G GV I N L+A+
Sbjct: 259 NLVTY-----NAVIDACGKG---GVEFKKVVEIFD-----GMLSNGVQPDRITFNSLLAV 305
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
S+ G +AA +F+ D G + TY ++A+ + D A+ + +M LP+
Sbjct: 306 CSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPN 365
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
+I + K G+ +A ++ + + + L+S + + ALD+
Sbjct: 366 VVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGR-FEQALDVC 424
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
+ + + +++++ + + + +M P ++++I YSK
Sbjct: 425 KEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKG 484
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
G AME+ + + GLK DV Y+ L+ G +E + +L+E K R + VTY
Sbjct: 485 GLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTY 544
Query: 447 HTLIRGYCKLEEFDCAL 463
+++I + + C +
Sbjct: 545 NSIIDAFGRSASAQCVV 561
>gi|255660802|gb|ACU25570.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 418
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 129/284 (45%), Gaps = 18/284 (6%)
Query: 235 YYFTI--EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTL 292
Y+F I + + A SV + + + G P +++ + K G E +
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNA 196
Query: 293 AREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKP----FSSVI 345
+ + P + LI+ LC+E D+ +L +MLD+ + P F+++I
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDN--------GLVPNGVTFTTLI 248
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
C+ V A + +M+S+ P +N++I K GD+ A +++ M +GLK
Sbjct: 249 DGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLK 308
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
PD TYT L+ G G +E A E K + RL V Y LI G C+ A K+
Sbjct: 309 PDKITYTTLIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
L EM VG++P + Y +I C K W T KLL++M+ G
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVW-TGSKLLKEMQRDG 411
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 139/280 (49%), Gaps = 4/280 (1%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSE--KVGKIISWFCKGGKAKEAHVVYTLAREK 296
I+ + RK A +V +++ET S+ +I+ + + G ++A Y L +E
Sbjct: 36 IQIVVSRKGKGSASAVFAEILETKGTQTSDIYVFSGLITAYLESGFLRDAIECYRLTKEH 95
Query: 297 KMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHG 356
K P ++ L + + KL ++ ++ F+ ++ S + ++
Sbjct: 96 KFRVPFDTCRKVLEHLMKL-KYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRL 154
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A+++ + G P FN++++ Y K GD+ + M++ G++PDVYTY+ L++
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLIN 214
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
G +M++A E+ +E N + VT+ TLI G+CK A+++ +M + P
Sbjct: 215 GLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVVLAMEIYKQMLSQSLSP 274
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++ YN LI LC K D + A+ L+++M +KGL + IT
Sbjct: 275 DLITYNTLIYGLCKKG-DLKQAQDLIDEMSMKGLKPDKIT 313
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 113/246 (45%), Gaps = 1/246 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N L+ + KLG F + N G + TY I L + D A + ++M+
Sbjct: 174 FNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 233
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G +P+ +I CK G+ A +Y + + P LI LC++ + +
Sbjct: 234 DNGLVPNGVTFTTLIDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD-L 292
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
K A D++D+ S + K ++++I C+ D+ A +MI E + + ++
Sbjct: 293 KQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTAL 352
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
IS + G A +ML+ M S GLKP++ TYT +++ + G + ++L E +++
Sbjct: 353 ISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGY 412
Query: 440 RLSPVT 445
S VT
Sbjct: 413 VPSVVT 418
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 122/280 (43%), Gaps = 1/280 (0%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
N L+ F K G+ + A VF+ +G + ++ + + D + + M
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+G PD +I+ CK K +A+ ++ + + P LI C+
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRV 257
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
V LA+++ ++ + ++++I LC+ D+ A+ L+ +M +G P + +
Sbjct: 258 V-LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 316
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I K GD+ A+E K M ++ D YT L+SG G+ +A ++L E
Sbjct: 317 LIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
+ TY +I +CK + KLL EM+ G P+V
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSV 416
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 54/235 (22%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS-EGPPPGNA-----------------VF 376
++ ++ + S+I LC + + AKTL+ ++S +G +A VF
Sbjct: 10 RHTLQSYCSMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAEILETKGTQTSDIYVF 69
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSR---------------------------------- 402
+ +I+AY ++G + A+E +L +
Sbjct: 70 SGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLE 129
Query: 403 -GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G +Y + LM + G++ A + + K R S V+++TL+ GY KL + D
Sbjct: 130 CGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDE 189
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+L N M+ GVQP+V Y+ LI LC K A +L ++M GL NG+T
Sbjct: 190 GFRLKNAMQASGVQPDVYTYSVLINGLC-KESKMDDANELFDEMLDNGLVPNGVT 243
>gi|255660808|gb|ACU25573.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 418
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 128/284 (45%), Gaps = 18/284 (6%)
Query: 235 YYFTI--EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTL 292
Y+F I + + A SV + + + G P +++ + K G E +
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNX 196
Query: 293 AREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKP----FSSVI 345
+ + P + LI+ LC+E D+ +L +MLD+ + P F+++I
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDN--------GLVPNGVTFTTLI 248
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
C+ V A + +M+S+ P +N++I K GD+ A ++ M +GLK
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLK 308
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
PD TYT L+ G G +E A E K + RL V Y LI G C+ A K+
Sbjct: 309 PDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
L EM VG++P + Y +I C K W T KLL++M+ G
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVW-TGSKLLKEMQRDG 411
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 138/280 (49%), Gaps = 4/280 (1%)
Query: 239 IEALSRRKIFDWAWSVCEKMIET--GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREK 296
I+ + RK A +V ++ET + D +I+ + + G ++A Y L +E
Sbjct: 36 IQIVVSRKGKGSASAVFAAJLETKGTQISDIYVFSGLITAYLESGFLRDAIECYRLTKEH 95
Query: 297 KMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHG 356
K P +J L + + KL ++ ++ F+ ++ S + ++
Sbjct: 96 KFRVPFDTCRKVJEHLMKL-KYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRL 154
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A+++ + G P FN++++ Y K GD+ + M++ G++PDVYTY+ L++
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNXMQASGVQPDVYTYSVLIN 214
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
G +M++A E+ +E N + VT+ TLI G+CK D A+++ +M + P
Sbjct: 215 GLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSP 274
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++ YN LI LC K D + A+ L ++M +KGL + IT
Sbjct: 275 DLITYNTLIYGLCKKG-DLKQAQDLTDEMSMKGLKPDKIT 313
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 111/246 (45%), Gaps = 1/246 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N L+ + KLG F + N G + TY I L + D A + ++M+
Sbjct: 174 FNTLMNGYIKLGDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 233
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G +P+ +I CK G+ A +Y + + P LI LC++ + +
Sbjct: 234 DNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD-L 292
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
K A D+ D+ S + K ++++I C+ + A +MI E + + ++
Sbjct: 293 KQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTAL 352
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
IS + G A +ML+ M S GLKP++ TYT +++ + G + ++L E +++
Sbjct: 353 ISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGY 412
Query: 440 RLSPVT 445
S VT
Sbjct: 413 VPSVVT 418
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 119/280 (42%), Gaps = 1/280 (0%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
N L+ F K G+ + A VF+ +G + ++ + + D + + M
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNXM 197
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+G PD +I+ CK K +A+ ++ + + P LI C+
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR- 256
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
V LA+++ ++ + ++++I LC+ D+ A+ L +M +G P + +
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTT 316
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I K G + A E K M ++ D YT L+SG G+ +A ++L E
Sbjct: 317 LIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
+ TY +I +CK + KLL EM+ G P+V
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSV 416
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 101/235 (42%), Gaps = 54/235 (22%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS-EGPPPGNA-----------------VF 376
++ ++ + ++I LC + + AKTL+ ++S +G +A VF
Sbjct: 10 RHTLQSYCTMIHFLCTHQMIXEAKTLIQIVVSRKGKGSASAVFAAJLETKGTQISDIYVF 69
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSR---------------------------------- 402
+ +I+AY ++G + A+E +L +
Sbjct: 70 SGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVJEHLMKLKYFKLVWGFYEESLE 129
Query: 403 -GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G +Y + LM + G++ A + + K R S V+++TL+ GY KL + D
Sbjct: 130 CGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDE 189
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+L N M+ GVQP+V Y+ LI LC K A +L ++M GL NG+T
Sbjct: 190 GFRLKNXMQASGVQPDVYTYSVLINGLC-KESKMDDANELFDEMLDNGLVPNGVT 243
>gi|449455956|ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
gi|449492939|ref|XP_004159147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
Length = 535
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 140/297 (47%), Gaps = 14/297 (4%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDY--GCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
N L+A+ + A ++F+ G Y N +TY+ I LSR + F+ S+ ++
Sbjct: 53 NRLVAMIRRQQNLDLALQIFHYAGKYHPAFTHNYDTYHAIIYRLSRARAFEPVESLLLEL 112
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQED 316
++G + +I + + K A + T R + +SV + L+++L Q +
Sbjct: 113 QDSGINCSEDLFITVIRSYGLASRPKMA--LKTFLRIQTFGVRRSVRSLNTLLNALVQNN 170
Query: 317 ETVKLALDMLDDFSGEARKYAIKP--FSS--VIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
+ L F K+ + P F+ +I++LC+ DV GA+ + +M S G P
Sbjct: 171 RFSSVHLL----FKYSKSKFGVVPNVFTCNILIKALCKKNDVEGARKVFDEMPSMGIVPN 226
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+ +++ Y GDM A + + G PD TYT LM GY G+ +A ++++
Sbjct: 227 VVTYTTILGGYVSRGDMIGAKRVFGELFDHGWLPDATTYTILMDGYVKQGRFTDAVKVMD 286
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
E ++N + +TY +I GYCK + AL LLN+M + PN K+I LC
Sbjct: 287 EMEENGVEPNDITYGVIILGYCKERKSGEALNLLNDMLEKKYIPNSALCCKVIDVLC 343
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 138/312 (44%), Gaps = 6/312 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+KA+C + ++D + +G V IL ++ +G A VF
Sbjct: 196 NILIKALCKKNDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMIG----AKRVFG 251
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ D+G + + TY ++ ++ F A V ++M E G P+ G II +CK
Sbjct: 252 ELFDHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKER 311
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
K+ EA + EKK P ++ +I LC E VK A M + +
Sbjct: 312 KSGEALNLLNDMLEKKYIPNSALCCKVIDVLCGEGR-VKEACKMWEKLLKKNCTPDNAIT 370
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
S++I LC+ ++ A+ L ++ G +N++I+ + G++ A + M
Sbjct: 371 STLIHWLCKEGNIWEARKLFNEF-ERGTISSLLTYNTLIAGMCEMGELCEAARLWDDMLE 429
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
+G P+ +TY L+ G+ G+ +E +++ E L+ TY L+ G KL + +
Sbjct: 430 KGCVPNEFTYNMLIKGFLKVGKAKEVIKVVEEMLDKGCLLNESTYLILVEGLLKLGKREE 489
Query: 462 ALKLLNEMKDVG 473
L +L+ + G
Sbjct: 490 LLNILSMIISSG 501
>gi|255660812|gb|ACU25575.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 418
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 128/284 (45%), Gaps = 18/284 (6%)
Query: 235 YYFTI--EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTL 292
Y+F I + + A SV + + + G P +++ + K G E +
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEGFRLKNA 196
Query: 293 AREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKP----FSSVI 345
+ + P + LI+ LC+E D+ +L +MLD+ + P F+++I
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDN--------GLVPNGVTFTTLI 248
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
C+ V A + +M+S+ P +N++I K GD+ A ++ M +GLK
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLK 308
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
PD TYT L+ G G +E A E K + RL V Y LI G C+ A K+
Sbjct: 309 PDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
L EM VG++P + Y +I C K W T KLL++M+ G
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVW-TGSKLLKEMQRDG 411
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 138/280 (49%), Gaps = 4/280 (1%)
Query: 239 IEALSRRKIFDWAWSVCEKMIET--GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREK 296
I+ + RK A +V ++ET + D +I+ + + G ++A Y L +E
Sbjct: 36 IQIVVSRKGKGSASAVFAAILETKGTQISDIYVFSGLITAYLESGFLRDAIECYRLTKEH 95
Query: 297 KMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHG 356
K P ++ L + + KL ++ ++ F+ ++ S + ++
Sbjct: 96 KFRVPFDTCRKVLEHLMKL-KYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRL 154
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A+++ + G P FN++++ Y K G++ + M++ G++PDVYTY+ L++
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEGFRLKNAMQASGVQPDVYTYSVLIN 214
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
G +M++A E+ +E N + VT+ TLI G+CK D A+++ +M + P
Sbjct: 215 GLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSP 274
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++ YN LI LC K D + A+ L ++M +KGL + IT
Sbjct: 275 DLITYNTLIYGLCKKG-DLKQAQDLTDEMSMKGLKPDKIT 313
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 111/246 (45%), Gaps = 1/246 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N L+ + KLG F + N G + TY I L + D A + ++M+
Sbjct: 174 FNTLMNGYIKLGNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 233
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G +P+ +I CK G+ A +Y + + P LI LC++ + +
Sbjct: 234 DNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD-L 292
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
K A D+ D+ S + K ++++I C+ + A +MI E + + ++
Sbjct: 293 KQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTAL 352
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
IS + G A +ML+ M S GLKP++ TYT +++ + G + ++L E +++
Sbjct: 353 ISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGY 412
Query: 440 RLSPVT 445
S VT
Sbjct: 413 APSVVT 418
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 119/280 (42%), Gaps = 1/280 (0%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
N L+ F K G+ + A VF+ +G + ++ + + D + + M
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEGFRLKNAM 197
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+G PD +I+ CK K +A+ ++ + + P LI C+
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR- 256
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
V LA+++ ++ + ++++I LC+ D+ A+ L +M +G P + +
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTT 316
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I K G + A E K M ++ D YT L+SG G+ +A ++L E
Sbjct: 317 LIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
+ TY +I +CK + KLL EM+ G P+V
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYAPSV 416
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 93/193 (48%), Gaps = 7/193 (3%)
Query: 301 PQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
P S+ F L+ S +E E ++LA + D + + ++ F++++ ++ ++
Sbjct: 133 PASLYFFNILMHSFVKEGE-IRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEGF 191
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
L + M + G P ++ +I+ K M A E+ M GL P+ T+T L+ G+
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251
Query: 419 ANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
G+++ A EI + LSP +TY+TLI G CK + A L +EM G++P
Sbjct: 252 CKNGRVDLAMEIYKQMLSQ--SLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKP 309
Query: 477 NVDEYNKLIQSLC 489
+ Y LI C
Sbjct: 310 DKITYTTLIDGSC 322
Score = 42.0 bits (97), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 81/178 (45%), Gaps = 22/178 (12%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS-EGPPPGNAVFNSVISAYSKAGDMTPAM 393
++ ++ + ++I LC + + AKTL+ ++S +G +AVF ++
Sbjct: 10 RHTLQSYCTMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAAI-------------- 55
Query: 394 EMLKLMRSRGLK-PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
+ ++G + D+Y ++GL++ Y G + +A E K++ R+ T ++
Sbjct: 56 -----LETKGTQISDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEH 110
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
KL+ F E + G ++ +N L+ S +K + R A+ + + + GL
Sbjct: 111 LMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSF-VKEGEIRLAQSVFDAITKWGL 167
>gi|449433161|ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 917
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 130/302 (43%), Gaps = 7/302 (2%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
+V N +IA + G + AF + +G + T + +L R+ D AW
Sbjct: 497 SVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIAL 556
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
MI+ G + ++ + + G A ++ + + ++P A I+ LC
Sbjct: 557 YDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCIS 616
Query: 316 DETVKLALDMLDDFSGEARKYAIKP---FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
L D D FS RK + ++S+I C++ ++ A L+ +M G P
Sbjct: 617 G----LMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPD 672
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
N +I K G M A+E M GL PD+ TY L+ GY + A +++
Sbjct: 673 IFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMM 732
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
+ + TY+ I GYC + + + A+ +L E+ VG+ PN YN +I ++C
Sbjct: 733 KMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMINAVCNVI 792
Query: 493 LD 494
LD
Sbjct: 793 LD 794
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 89/187 (47%), Gaps = 5/187 (2%)
Query: 334 RKYAIKPFSSVI----RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
R+ + P S I R L R D L ++ +GP P N FN +I + + G
Sbjct: 245 REVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFTFNLLILEFCRKGWT 304
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
+L +M +PDVY+Y +++ GQ A +LN +N + S T+ T+
Sbjct: 305 RIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTI 364
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
I +CK + A K +E++D+G+ N YN +I +KA D A L E+MR K
Sbjct: 365 IDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGY-VKARDISQANLLFEEMRTKD 423
Query: 510 LHLNGIT 516
+ +GIT
Sbjct: 424 IVPDGIT 430
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 129/293 (44%), Gaps = 9/293 (3%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+L+ L+ F K A E+ +K + G N L R W + +
Sbjct: 220 VLDTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDV 279
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+ G P++ +I FC+ G + + + + + P +I++ C + ++
Sbjct: 280 VRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQS 339
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
AL +L+ K +I F ++I + C+ +V A+ ++ G V+N
Sbjct: 340 -SYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNI 398
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK-- 436
+IS Y KA D++ A + + MR++ + PD T+ L++G+ G+ E+ +L +
Sbjct: 399 MISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSG 458
Query: 437 --NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
+ S L VT + G C +D A+KLL + G+ P+V +N +I +
Sbjct: 459 LLHDSSLCDVT----VAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAA 507
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 125/348 (35%), Gaps = 35/348 (10%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N LI F + G + + + G + C + +Y I A + +A + MI
Sbjct: 291 FNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSSYALHLLNLMI 350
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISS-------- 311
E G P II FCK G + A + + + V +IS
Sbjct: 351 ENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDIS 410
Query: 312 ----LCQEDETVKLALD----------------------MLDDFSGEARKYAIKPFSSVI 345
L +E T + D +L D S + +
Sbjct: 411 QANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTV 470
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
LC A LL ++ +G PP FNS+I+AY AG A +M GL
Sbjct: 471 AGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLT 530
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
P T + L+ G ++EA L + ++ + + L+ GY ++ + A L
Sbjct: 531 PSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESL 590
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
NEMK GV P+ + I LC+ L A + DM KG N
Sbjct: 591 WNEMKGRGVFPDAVAFAAFINGLCISGL-MTDAYDVFSDMLRKGFVPN 637
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 121/315 (38%), Gaps = 42/315 (13%)
Query: 179 ALWDIVKEIGEKEKGV-LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYF 237
AL+D++ +KG +T L+ + ++G A ++N+ G + +
Sbjct: 555 ALYDMI------DKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAA 608
Query: 238 TIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKK 297
I L + A+ V M+ G +P++ +I FCK GK EA + ++
Sbjct: 609 FINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRG 668
Query: 298 MYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGA 357
+ P V +I LC++ +KLA++ D I ++++I C+ DV GA
Sbjct: 669 LLPDIFTVNMIICGLCKQGR-MKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGA 727
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG---- 413
L+ KM G P +N I Y + A+ +L+ + S G+ P+ TY
Sbjct: 728 DDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMINA 787
Query: 414 ------------------------------LMSGYANGGQMEEACEILNEAKKNHSRLSP 443
L+S + G E+A + + H
Sbjct: 788 VCNVILDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKAIFWGQKLSEIHLDFDE 847
Query: 444 VTYHTLIRGYCKLEE 458
T+ + R Y LEE
Sbjct: 848 TTHKLMNRAYRALEE 862
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 109/262 (41%), Gaps = 6/262 (2%)
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A + KM E G P+ + + + G ++ K P LI
Sbjct: 237 ALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFTFNLLIL 296
Query: 311 SLCQEDETV--KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
C++ T + L ++ F E Y+ ++ VI + C A LL+ MI G
Sbjct: 297 EFCRKGWTRIGEALLHVMGKFRCEPDVYS---YNIVINANCLKGQSSYALHLLNLMIENG 353
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P A F ++I A+ K G++ A + + GL + Y ++SGY + +A
Sbjct: 354 CKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQAN 413
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ E + +T++TL+ G+ + + + +LL ++ G+ + + + L
Sbjct: 414 LLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGL 473
Query: 489 CLKALDWRTAEKLLEDMRLKGL 510
C A + A KLLE++ KG+
Sbjct: 474 CW-AGRYDEAMKLLENLLGKGI 494
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 156/372 (41%), Gaps = 59/372 (15%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L +C + E + L D ++++G V+T N L+ K + A +
Sbjct: 318 NVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTY---NTLVDACFKCQRSSDALNLLE 374
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ + G ++ T+ ++ L R + A E M E G PD +I CK G
Sbjct: 375 EMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAG 434
Query: 282 KAKEAHVV--------------------YTLAREKKM--------YPPQ----------- 302
+A V+ Y L +EK+ PPQ
Sbjct: 435 NVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYG 494
Query: 303 SVVAFLI------SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHG 356
+V+A +LC DE +K L +I ++++I+ L M +
Sbjct: 495 TVMAAYFKEYKPEPALCLWDEMIKRKL-----------TPSISTYNTLIKGLSTMGKLTE 543
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A L++++ G P + +N +I AY K GD+ A + M KPDV T LM+
Sbjct: 544 AIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMN 603
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
G G++E+A ++ + ++ +TY+TLI+ CK + D AL+ +M+ G+QP
Sbjct: 604 GLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQP 663
Query: 477 NVDEYNKLIQSL 488
+V YN L+ +L
Sbjct: 664 DVFTYNVLLSAL 675
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 118/219 (53%), Gaps = 12/219 (5%)
Query: 297 KMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHG 356
+++P L+ + C + T+ AL L G +++++ + CR +
Sbjct: 204 RLHPNHYTFNLLVHTHCSKG-TLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGE 262
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A+TLL++M EG P A +N+++SAY++ G + A ++++ M + G +PD++TY L +
Sbjct: 263 ARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAA 322
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGV 474
G G+++EA ++ +E ++ +SP VTY+TL+ K + AL LL EM++ GV
Sbjct: 323 GLCQAGKVDEAFKLKDEMEQ-LGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGV 381
Query: 475 QPNVDEYNKLIQSLC--------LKALDWRTAEKLLEDM 505
+ ++ +N +++ LC L L+ T E L D+
Sbjct: 382 KSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDV 420
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 123/288 (42%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+ + G A + + G V + TY + A +R A V E M
Sbjct: 248 NTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTA 307
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD + + C+ GK EA + + + P V + C + +
Sbjct: 308 FGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSS 367
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
AL++L++ + K ++ + +++ LCR + A L M EG P +N++I
Sbjct: 368 DALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLI 427
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
A KAG++ A ++ M GLK D +T L+ + EEA E+L +
Sbjct: 428 DASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFV 487
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
V+Y T++ Y K + + AL L +EM + P++ YN LI+ L
Sbjct: 488 PDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGL 535
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 167/399 (41%), Gaps = 43/399 (10%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ LL A C E L +K KE V T N L++ +++LG K A +V
Sbjct: 248 NTLLNAHCRKGMLGEARTLLARMK----KEGIVPTRATYNTLVSAYARLGWIKQATDVVE 303
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL-PDSEKVGKIISWFCKG 280
+G + TY L + D A+ + ++M + G + PD ++ K
Sbjct: 304 AMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKC 363
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
++ +A + REK + ++ LC+E + ++ AL L+ + E +
Sbjct: 364 QRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQ-LEEALGRLEMMTEEGLTPDVIT 422
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEG------------------------------PP 370
++++I + C+ +V A L+ +M+ G PP
Sbjct: 423 YNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPP 482
Query: 371 -----PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
P + +V++AY K PA+ + M R L P + TY L+ G + G++
Sbjct: 483 QRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLT 542
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
EA + LNE + TY+ +I YCK + + A + N+M + +P+V N L+
Sbjct: 543 EAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLM 602
Query: 486 QSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAV 523
LCL A KL E KG ++ IT LI+A+
Sbjct: 603 NGLCLYG-RLEKAMKLFESWVEKGKKVDVITYNTLIQAL 640
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 154/360 (42%), Gaps = 15/360 (4%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ A C + + + L D + G K + LN L+ K + + A E+
Sbjct: 424 NTLIDASCKAGNVAKAFVLMDEMVRSGLK----MDTFTLNTLLYNLCKEKRYEEAEELLR 479
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G V ++ +Y + A + + A + ++MI+ P +I G
Sbjct: 480 APPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMG 539
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
K EA E + P + +I + C+E + K A + + K +
Sbjct: 540 KLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEK-AFQFHNKMVENSFKPDVVTC 598
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
++++ LC + A L + +G +N++I A K D+ A+ M
Sbjct: 599 NTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEV 658
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEI---LNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
RGL+PDV+TY L+S + G+ EA ++ LNE+ K + R ++ I+ + E
Sbjct: 659 RGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRF----FYPSIKSSVEAVE 714
Query: 459 FDCALKLLNEMKDVGVQPNVDE--YNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++ ++++ VG D+ YNK I+ LC+ + A+ +L++M KG+ ++ T
Sbjct: 715 TGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGG-QLKEAKAVLDEMMQKGMSVDNST 773
>gi|297601813|ref|NP_001051548.2| Os03g0795400 [Oryza sativa Japonica Group]
gi|222625958|gb|EEE60090.1| hypothetical protein OsJ_12941 [Oryza sativa Japonica Group]
gi|255674962|dbj|BAF13462.2| Os03g0795400 [Oryza sativa Japonica Group]
Length = 728
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 136/298 (45%), Gaps = 7/298 (2%)
Query: 193 GVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWA 251
GVL VE LN LI + + G + A F+K C+ N T+ I AL D +
Sbjct: 199 GVLPDVETLNWLIEVLCEAGHLELALVQFDKMSKKRCIPNSRTFKILITALCSHGRADES 258
Query: 252 WSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISS 311
+KM++ +PDS +++ FCK K KEA ++ + +E K+ Q + + LI
Sbjct: 259 ADAFDKMLQLRCIPDSSFCVQVLPLFCKFNKLKEARKLHQMMKEYKLQSDQHLYSALIRC 318
Query: 312 LCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
LC E++ + A+ ++D F +++ C + H A L E
Sbjct: 319 LC-ENQLLDDAVTTVNDMIASGHALMRSTFVNIVDCYCTLGQFHKAVNFL----EENDVA 373
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+N ++ + K G + ++ L + SRGL + ++ +++ + N G + A E++
Sbjct: 374 EIEAYNVLLRSLCKTGRVQDSVNYLTELHSRGL-VNCQSWNIVIAQFCNNGNIRRASELI 432
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ TY +++ YCKL + AL + + + N + +++L++SLC
Sbjct: 433 CRMIVSSFTADESTYSSVVSCYCKLGLYKNALDMFRRLDVSNLSLNSESFSQLVESLC 490
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/262 (19%), Positives = 97/262 (37%), Gaps = 1/262 (0%)
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+ + L + + +I+ FC G + A + +S + ++S C+
Sbjct: 401 LHSRGLVNCQSWNIVIAQFCNNGNIRRASELICRMIVSSFTADESTYSSVVSCYCKLG-L 459
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
K ALDM + FS ++ SLC MK + A + G +
Sbjct: 460 YKNALDMFRRLDVSNLSLNSESFSQLVESLCHMKKIQEAAEVFKYHCKRGCNLTSESLEM 519
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I G + A++M L G TY + + + ++ +
Sbjct: 520 LIQESCMVGMIREAIKMRSLAVCTGTSCTFTTYNTIFRALLHLKKEKDVLLLFAHMLMEG 579
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
L+ TY+ ++R + E A L N M G P+ + + L+ + L +L +
Sbjct: 580 CLLNEYTYNCILRYFLTKETIFEAAILFNRMVKDGFVPDQETFELLVPEMALSSLLNMIS 639
Query: 499 EKLLEDMRLKGLHLNGITRALI 520
E LL + + G+ I+ +I
Sbjct: 640 ESLLTVVNMDGMMSPRISNIII 661
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 64/328 (19%), Positives = 129/328 (39%), Gaps = 10/328 (3%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGE-KEKGVLTVEILNELIALFSKLGKGKAAFEVF 220
+ LL+++C + G+ + D V + E +G++ + N +IA F G + A E+
Sbjct: 379 NVLLRSLCKT-GRVQ-----DSVNYLTELHSRGLVNCQSWNIVIAQFCNNGNIRRASELI 432
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ A++ TY + + ++ A + ++ + +SE +++ C
Sbjct: 433 CRMIVSSFTADESTYSSVVSCYCKLGLYKNALDMFRRLDVSNLSLNSESFSQLVESLCHM 492
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
K +EA V+ ++ + LI C ++ A+ M
Sbjct: 493 KKIQEAAEVFKYHCKRGCNLTSESLEMLIQESCMVG-MIREAIKMRSLAVCTGTSCTFTT 551
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++++ R+L +K L + M+ EG +N ++ + + A + M
Sbjct: 552 YNTIFRALLHLKKEKDVLLLFAHMLMEGCLLNEYTYNCILRYFLTKETIFEAAILFNRMV 611
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G PD T+ L+ A + E L +SP + +I G K E F
Sbjct: 612 KDGFVPDQETFELLVPEMALSSLLNMISESLLTVVNMDGMMSPRISNIIIYGLIK-EGFK 670
Query: 461 C-ALKLLNEMKDVGVQPNVDEYNKLIQS 487
A K L++M + G P+ ++ L+ S
Sbjct: 671 SEACKFLDQMIEKGWVPDSRTHSILLSS 698
>gi|225465635|ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial [Vitis vinifera]
gi|296085293|emb|CBI29025.3| unnamed protein product [Vitis vinifera]
Length = 854
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 137/302 (45%), Gaps = 5/302 (1%)
Query: 217 FEVFNKFGDYGCVANQETYYFTI--EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
FEV NKF + +T F+I + L D A S+ M+ G + +I
Sbjct: 441 FEV-NKFFMVKEMVRPDTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLI 499
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR 334
+ +E +++ + P Q + LC+ E V ALDM+ +
Sbjct: 500 DKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRR-EDVTGALDMVREMRVHGH 558
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
+ IK ++ +++ LC+ K A L++M+ EG P +++ I + K + A+E
Sbjct: 559 EPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALE 618
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+ + + +RG PDV Y L++G+ ++ EA +IL+E S VTY+ LI G+C
Sbjct: 619 IFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWC 678
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG 514
K + D A L+ M +PNV Y LI LC A A L +MR KG N
Sbjct: 679 KNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLC-NAGRPDDAIHLWNEMRGKGCSPNR 737
Query: 515 IT 516
I+
Sbjct: 738 IS 739
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 161/370 (43%), Gaps = 36/370 (9%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNE--------------LIA 205
+V+ LK +C S + + Y L +++ K + + NE L+
Sbjct: 217 LVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWVDGHVLSILVL 276
Query: 206 LFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLP 265
FSK G+ AFE+ + D G N++T+ I R+ D A + +KM ++G P
Sbjct: 277 TFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAP 336
Query: 266 DSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDM 325
D +I C + ++A + + +E + P +++ LI+ +E + +L +
Sbjct: 337 DVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIAYCSEEVDIYRLIEER 396
Query: 326 LDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSK----------------MISEGP 369
L+D EA + ++SV+ L K V A LL M+ E
Sbjct: 397 LEDLDTEA---MLLLYNSVLNGLVNGKSVDKAYYLLRAMTGDNYTDNFEVNKFFMVKEMV 453
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
P F+ VI G + A+ + + M G K +V Y L+ +N ++EE
Sbjct: 454 RPDTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYL 513
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+L E K + R + T++++ C+ E+ AL ++ EM+ G +P + Y L++ LC
Sbjct: 514 LLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLC 573
Query: 490 LKALDWRTAE 499
+ R+AE
Sbjct: 574 KRK---RSAE 580
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 161/371 (43%), Gaps = 12/371 (3%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
++ +C++ +L+ + +G K+ V + N LI S + + + + +
Sbjct: 463 VIDGLCNTGKLDLALSLFRDMVRVGCKQ----NVLLYNNLIDKLSNSNRLEECYLLLKEM 518
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKA 283
G Q T+ L RR+ A + +M G P + ++ CK ++
Sbjct: 519 KGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRS 578
Query: 284 KEA-HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
EA + + + RE + P V + + V AL++ D + ++
Sbjct: 579 AEACNFLAEMVREG--FLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYN 636
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
++I C++K V A +L +M+++G P +N +I + K GD+ A L M +
Sbjct: 637 TLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGK 696
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
+P+V TYT L+ G N G+ ++A + NE + + +++ LI G CK D A
Sbjct: 697 EREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLCKCGWPDAA 756
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITR---AL 519
L EM + P+ Y LI S + + A ++L++M KG + + + L
Sbjct: 757 LLYFREMGERET-PDTIVYVALITSF-ISNKNPTLAFEILKEMVAKGKFPDPLDKNDLPL 814
Query: 520 IRAVKELEEDA 530
A+ EL EDA
Sbjct: 815 RDAILELAEDA 825
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 160/336 (47%), Gaps = 15/336 (4%)
Query: 194 VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCV-ANQETYYFTIEALSRRKIFDWAW 252
+LT E++ ++ S L K A+ FN D G N TY LS +
Sbjct: 92 MLTHEVVENVL---SGLKSWKIAYRFFNWASDQGGFNHNCYTYNAMASCLSHARQNAPLS 148
Query: 253 SVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSV-VAFLISS 311
+ ++ + +G I G +EA++++ + ++ P S L+ +
Sbjct: 149 LLSMDIVNSRCAMSPGALGFFIRCLGSTGLVEEANLLFDQVKMMRLCVPNSYSFNCLLEA 208
Query: 312 LCQED--ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
+ + + V++ L + D E KY + +SV+++ C + A ++ +++ G
Sbjct: 209 ISKSGSIDLVEMRLKEMCDSGWEPDKYTL---TSVLQAYCNSRKFDKALSVFNEIYGRGW 265
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
G+ V + ++ +SK G++ A E+++ M G++ + T+ L+ G+ ++++A +
Sbjct: 266 VDGH-VLSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQ 324
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + +K+ Y LI G C +E + AL LL+EMK++G+ P++ +KLI + C
Sbjct: 325 LFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLI-AYC 383
Query: 490 LKALD-WRTAEKLLEDMRLKGLHL--NGITRALIRA 522
+ +D +R E+ LED+ + + L N + L+
Sbjct: 384 SEEVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNG 419
>gi|108711539|gb|ABF99334.1| expressed protein [Oryza sativa Japonica Group]
Length = 744
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 136/298 (45%), Gaps = 7/298 (2%)
Query: 193 GVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWA 251
GVL VE LN LI + + G + A F+K C+ N T+ I AL D +
Sbjct: 199 GVLPDVETLNWLIEVLCEAGHLELALVQFDKMSKKRCIPNSRTFKILITALCSHGRADES 258
Query: 252 WSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISS 311
+KM++ +PDS +++ FCK K KEA ++ + +E K+ Q + + LI
Sbjct: 259 ADAFDKMLQLRCIPDSSFCVQVLPLFCKFNKLKEARKLHQMMKEYKLQSDQHLYSALIRC 318
Query: 312 LCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
LC E++ + A+ ++D F +++ C + H A L E
Sbjct: 319 LC-ENQLLDDAVTTVNDMIASGHALMRSTFVNIVDCYCTLGQFHKAVNFL----EENDVA 373
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+N ++ + K G + ++ L + SRGL + ++ +++ + N G + A E++
Sbjct: 374 EIEAYNVLLRSLCKTGRVQDSVNYLTELHSRGL-VNCQSWNIVIAQFCNNGNIRRASELI 432
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ TY +++ YCKL + AL + + + N + +++L++SLC
Sbjct: 433 CRMIVSSFTADESTYSSVVSCYCKLGLYKNALDMFRRLDVSNLSLNSESFSQLVESLC 490
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/262 (19%), Positives = 97/262 (37%), Gaps = 1/262 (0%)
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+ + L + + +I+ FC G + A + +S + ++S C+
Sbjct: 401 LHSRGLVNCQSWNIVIAQFCNNGNIRRASELICRMIVSSFTADESTYSSVVSCYCKLG-L 459
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
K ALDM + FS ++ SLC MK + A + G +
Sbjct: 460 YKNALDMFRRLDVSNLSLNSESFSQLVESLCHMKKIQEAAEVFKYHCKRGCNLTSESLEM 519
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I G + A++M L G TY + + + ++ +
Sbjct: 520 LIQESCMVGMIREAIKMRSLAVCTGTSCTFTTYNTIFRALLHLKKEKDVLLLFAHMLMEG 579
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
L+ TY+ ++R + E A L N M G P+ + + L+ + L +L +
Sbjct: 580 CLLNEYTYNCILRYFLTKETIFEAAILFNRMVKDGFVPDQETFELLVPEMALSSLLNMIS 639
Query: 499 EKLLEDMRLKGLHLNGITRALI 520
E LL + + G+ I+ +I
Sbjct: 640 ESLLTVVNMDGMMSPRISNIII 661
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 54/295 (18%), Positives = 112/295 (37%), Gaps = 8/295 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGE-KEKGVLTVEILNELIALFSKLGKGKAAFEVF 220
+ LL+++C + G+ + D V + E +G++ + N +IA F G + A E+
Sbjct: 379 NVLLRSLCKT-GRVQ-----DSVNYLTELHSRGLVNCQSWNIVIAQFCNNGNIRRASELI 432
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ A++ TY + + ++ A + ++ + +SE +++ C
Sbjct: 433 CRMIVSSFTADESTYSSVVSCYCKLGLYKNALDMFRRLDVSNLSLNSESFSQLVESLCHM 492
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
K +EA V+ ++ + LI C ++ A+ M
Sbjct: 493 KKIQEAAEVFKYHCKRGCNLTSESLEMLIQESCMVG-MIREAIKMRSLAVCTGTSCTFTT 551
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++++ R+L +K L + M+ EG +N ++ + + A + M
Sbjct: 552 YNTIFRALLHLKKEKDVLLLFAHMLMEGCLLNEYTYNCILRYFLTKETIFEAAILFNRMV 611
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
G PD T+ L+ A + E L +SP + +I G K
Sbjct: 612 KDGFVPDQETFELLVPEMALSSLLNMISESLLTVVNMDGMMSPRISNIIIYGLIK 666
>gi|125548468|gb|EAY94290.1| hypothetical protein OsI_16061 [Oryza sativa Indica Group]
Length = 586
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 158/343 (46%), Gaps = 11/343 (3%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFG-DYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
++I + + G+ A ++F++ YG + F + + + + D + ++ K
Sbjct: 151 QQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKAS 210
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDE 317
E G ++ K++S G+ + ++ + ++Y P V +F +I +C+ +
Sbjct: 211 EFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPD-VWSFNVVIKGVCRVGQ 269
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV-F 376
V+ AL++++ + + ++ LCR +V +L ++ +G N V F
Sbjct: 270 -VQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTF 328
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
SVIS Y KAG + AM + M + G+ P+ TY L++GY G + A E+ + +
Sbjct: 329 TSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTR 388
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK----- 491
VT+ +LI GYC+ + D AL++ ++M +QPNV ++ +I SLC +
Sbjct: 389 LRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDE 448
Query: 492 ALDWRTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIENG 534
A+ L D+ + N + L + K E + I G
Sbjct: 449 AICLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKG 491
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 120/295 (40%), Gaps = 4/295 (1%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N +I ++G+ + A E+ + ++GC + T+ ++ L R V ++
Sbjct: 257 FNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQ 316
Query: 260 ETG-SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
G +P+ +IS +CK GK ++A VY + P LI+ + +
Sbjct: 317 RDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGD- 375
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+ A+++ + + FSS+I CR + A + S M P F+
Sbjct: 376 LGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSI 435
Query: 379 VISAYSKAGDMTPAMEMLKLMRSR-GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+I + K A+ +L + R + P + Y ++ G+++EA I ++
Sbjct: 436 IIHSLCKQNRSDEAICLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEK 495
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
R TY LI GYC A+ +EM + G P+ N I L LKA
Sbjct: 496 GCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCL-LKA 549
>gi|410109867|gb|AFV61013.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia salsoloides]
Length = 410
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 163/389 (41%), Gaps = 53/389 (13%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLT--VEILNELIALFSKLGKGKAAFEVF 220
+L++ + S GK A++ + E KG L + + + LI + + G + A E +
Sbjct: 26 SLIQVVVSRKGKGSASAVFAAILE----TKGTLRSDIYVFSGLITAYLESGFLRDAIECY 81
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
++ +T +E L + K F W ++++E G ++ FCK
Sbjct: 82 RLTREHKFWVPFDTCKKVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKE 141
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAF--LISS---LCQEDETVKLALDMLDDFSGEARK 335
G+ + A V+ + + P SVV+F L++ L DE +L M +
Sbjct: 142 GEIRVARSVFDAITKWGLRP--SVVSFNTLMNGYIRLGDLDEGFRLKSAM----HASGVE 195
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+ +S +I LC+ + GA L +M+ +G P F ++I + K G + AME+
Sbjct: 196 PDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEI 255
Query: 396 LKLM-----------------------------------RSRGLKPDVYTYTGLMSGYAN 420
K M R +GLKPD TYT L+ G
Sbjct: 256 YKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYTTLIDGCCK 315
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
G +E A E + + RL V Y TLI G C+ A K+L EM VG++P+
Sbjct: 316 EGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDAEKMLREMLSVGLKPDTGT 375
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
Y +I C K W T KLL++M+ G
Sbjct: 376 YTMIINEFCKKGDVW-TGSKLLKEMQRDG 403
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 138/280 (49%), Gaps = 4/280 (1%)
Query: 239 IEALSRRKIFDWAWSVCEKMIET-GSL-PDSEKVGKIISWFCKGGKAKEAHVVYTLAREK 296
I+ + RK A +V ++ET G+L D +I+ + + G ++A Y L RE
Sbjct: 28 IQVVVSRKGKGSASAVFAAILETKGTLRSDIYVFSGLITAYLESGFLRDAIECYRLTREH 87
Query: 297 KMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHG 356
K + P ++ L + + KL + ++ F+ ++ C+ ++
Sbjct: 88 KFWVPFDTCKKVLEHL-MKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIRV 146
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A+++ + G P FN++++ Y + GD+ + M + G++PDVYTY+ L++
Sbjct: 147 ARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVEPDVYTYSVLIN 206
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
G +++ A E+ +E + VT+ TLI G+CK D A+++ +M +
Sbjct: 207 GLCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSA 266
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++ YN LI LC K D + A+ L+++MR+KGL + IT
Sbjct: 267 DLITYNTLIYGLCKKG-DLKQAQNLIDEMRMKGLKPDKIT 305
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 129/299 (43%), Gaps = 2/299 (0%)
Query: 180 LWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI 239
+W KEI E ++ N L+ F K G+ + A VF+ +G + ++ +
Sbjct: 112 VWGFYKEILECGYPA-SLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLM 170
Query: 240 EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
R D + + M +G PD +I+ CK K A+ ++ +K +
Sbjct: 171 NGYIRLGDLDEGFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLV 230
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P LI C+ V LA+++ ++ + ++++I LC+ D+ A+
Sbjct: 231 PNGVTFTTLIDGHCKNGR-VDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQN 289
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
L+ +M +G P + ++I K GD+ A E K M ++ D YT L+SG
Sbjct: 290 LIDEMRMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLC 349
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G+ +A ++L E + TY +I +CK + KLL EM+ G P+V
Sbjct: 350 QEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSV 408
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 113/250 (45%), Gaps = 9/250 (3%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N L+ + +LG F + + G + TY I L + D A + ++M+
Sbjct: 166 FNTLMNGYIRLGDLDEGFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEML 225
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G +P+ +I CK G+ A +Y + + LI LC++ + +
Sbjct: 226 DKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGD-L 284
Query: 320 KLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
K A +++D E R +KP ++++I C+ D+ A +MI E + V
Sbjct: 285 KQAQNLID----EMRMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVV 340
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+ ++IS + G A +ML+ M S GLKPD TYT +++ + G + ++L E +
Sbjct: 341 YTTLISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQ 400
Query: 436 KNHSRLSPVT 445
++ S VT
Sbjct: 401 RDGHVPSVVT 410
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 153/349 (43%), Gaps = 49/349 (14%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL------PDSEK 269
A +F + GC N TY I+ L + + A + ++M+ S P
Sbjct: 180 ATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVIT 239
Query: 270 VGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC---QEDETVKLALDML 326
II CK G+ EA ++ + + M P + LI C + D++ L +M+
Sbjct: 240 YSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMV 299
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
D + + + FS +I +LC+ V AK LL MI G P +NS+I +
Sbjct: 300 D----QGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMV 355
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
GD+ A E+ M S+GL+PD +YT L++GY +++EA + NE + + TY
Sbjct: 356 GDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTY 415
Query: 447 HTLIRGYCK--------------------------------LEEFDC---ALKLLNEMKD 471
TL++G + L + DC A++L NE+K
Sbjct: 416 GTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKS 475
Query: 472 VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
+ N++ Y+ LI LC KA TA +L E + +GL + +T ++
Sbjct: 476 YNFKLNIENYSCLIDGLC-KAGKLETAWELFEKLSQEGLQPDVVTYNIM 523
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 130/296 (43%), Gaps = 14/296 (4%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G + N TY I+ L A + +M + G P++ G +I C+ G A
Sbjct: 156 GYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIA 215
Query: 287 HVVYT-LAREKKMY-----PPQSVVAFLISSLCQ---EDETVKLALDMLDDFSGEARKYA 337
++ + + Y P + +I LC+ EDE A ++ ++ +
Sbjct: 216 LKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDE----AKELFEEMKAQGMIPD 271
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+ +S++I C +K L +M+ +G P F+ +I K G +T A ++L+
Sbjct: 272 VISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLE 331
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
+M RG+ P++ TY L+ G+ G + A E+ ++Y TLI GYCK
Sbjct: 332 VMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTW 391
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
+ A+ L NEM VG PNV Y L++ L K A+KL M+ G+ N
Sbjct: 392 KVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKG-KVGDAKKLFGVMKTYGVSAN 446
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 130/287 (45%), Gaps = 1/287 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F GK + +F++ D G + T+ I+ L + A + E MI+ G
Sbjct: 278 LIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRG 337
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+P+ +I FC G A ++ K + P + LI+ C+ + VK A
Sbjct: 338 IVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWK-VKEA 396
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+++ ++ + + + ++++ L + V AK L M + G + ++ +
Sbjct: 397 MNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDG 456
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
K + AME+ ++S K ++ Y+ L+ G G++E A E+ + + +
Sbjct: 457 LCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPD 516
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
VTY+ +I G+CK+ + D A L +M++ G P++ YN L+ C
Sbjct: 517 VVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFC 563
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 136/317 (42%), Gaps = 5/317 (1%)
Query: 193 GVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAW 252
GV+T I+ I K+G+ A E+F + G + + +Y I +D +
Sbjct: 236 GVITYSII---IDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSK 292
Query: 253 SVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSL 312
+ ++M++ G PD +I CK GK EA + + ++ + P LI
Sbjct: 293 HLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGF 352
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
C + + A ++ + + ++++I C+ V A L ++M+ G P
Sbjct: 353 CMVGD-LNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPN 411
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+ +++ + G + A ++ +M++ G+ + Y + G + EA E+ N
Sbjct: 412 VTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFN 471
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
E K + +L+ Y LI G CK + + A +L ++ G+QP+V YN +I C K
Sbjct: 472 ELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFC-KV 530
Query: 493 LDWRTAEKLLEDMRLKG 509
A L E M G
Sbjct: 531 GQVDNANILFEKMEENG 547
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 116/266 (43%), Gaps = 1/266 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI F +G +A E+F G ++ +Y I + A ++ +M++
Sbjct: 346 NSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQ 405
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ G ++ + GK +A ++ + + + + + LC+ D +
Sbjct: 406 VGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFE 465
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A+++ ++ K I+ +S +I LC+ + A L K+ EG P +N +I
Sbjct: 466 -AMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMI 524
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ K G + A + + M G PD+ Y L+ G+ G ++EE ++L++ +
Sbjct: 525 HGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVS 584
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLL 466
+ + ++ CK E++ + LL
Sbjct: 585 PNAASCTIVVDMLCKDEKYKKFVDLL 610
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 10/198 (5%)
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLS---KMISEGPPPGNAVFNS 378
A+ F R + I P SS R L + ++ L S +M G P +
Sbjct: 72 AIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSI 131
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+ + ++ A+ + + RG P+V TYT L+ G ++ EA + +K
Sbjct: 132 LANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLG 191
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD------VGVQPNVDEYNKLIQSLCLKA 492
+ VTY TLI+G C+ + ALKL EM + V +P V Y+ +I LC K
Sbjct: 192 CTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLC-KV 250
Query: 493 LDWRTAEKLLEDMRLKGL 510
A++L E+M+ +G+
Sbjct: 251 GREDEAKELFEEMKAQGM 268
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 5/172 (2%)
Query: 158 SGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAF 217
S + L +C + E L++ +K K L +E + LI K GK + A+
Sbjct: 447 SQIYGIFLDGLCKNDCLFEAMELFNELKSYNFK----LNIENYSCLIDGLCKAGKLETAW 502
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
E+F K G + TY I + D A + EKM E G PD ++ F
Sbjct: 503 ELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGF 562
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDF 329
C+G K +E + +K + P + ++ LC+ DE K +D+L F
Sbjct: 563 CEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCK-DEKYKKFVDLLPKF 613
>gi|115458614|ref|NP_001052907.1| Os04g0446100 [Oryza sativa Japonica Group]
gi|38344550|emb|CAD40961.2| OSJNBa0027P08.18 [Oryza sativa Japonica Group]
gi|113564478|dbj|BAF14821.1| Os04g0446100 [Oryza sativa Japonica Group]
Length = 583
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 158/343 (46%), Gaps = 11/343 (3%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFG-DYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
++I + + G+ A ++F++ YG + F + + + + D + ++ K
Sbjct: 148 QQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKAS 207
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSLCQEDE 317
E G ++ K++S G+ + ++ + ++Y P V +F +I +C+ +
Sbjct: 208 EFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPD-VWSFNVVIKGVCRVGQ 266
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV-F 376
V+ AL++++ + + ++ LCR +V +L ++ +G N V F
Sbjct: 267 -VQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTF 325
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
SVIS Y KAG + AM + M + G+ P+ TY L++GY G + A E+ + +
Sbjct: 326 TSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTR 385
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK----- 491
VT+ +LI GYC+ + D AL++ ++M +QPNV ++ +I SLC +
Sbjct: 386 LRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDE 445
Query: 492 ALDWRTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIENG 534
A+ L D+ + N + L + K E + I G
Sbjct: 446 AIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKG 488
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 120/295 (40%), Gaps = 4/295 (1%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N +I ++G+ + A E+ + ++GC + T+ ++ L R V ++
Sbjct: 254 FNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQ 313
Query: 260 ETG-SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
G +P+ +IS +CK GK ++A VY + P LI+ + +
Sbjct: 314 RDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGD- 372
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+ A+++ + + FSS+I CR + A + S M P F+
Sbjct: 373 LGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSI 432
Query: 379 VISAYSKAGDMTPAMEMLKLMRSR-GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+I + K A+ +L + R + P + Y ++ G+++EA I ++
Sbjct: 433 IIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEK 492
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
R TY LI GYC A+ +EM + G P+ N I L LKA
Sbjct: 493 GCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCL-LKA 546
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 134/315 (42%), Gaps = 7/315 (2%)
Query: 181 WDIVKEIGEKEKGVLTVEILNELIAL---FSKLGKGKAAFEVFNKFGDYGCVANQETYYF 237
+D V + K L + L AL F AF V + G N
Sbjct: 58 YDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNL 117
Query: 238 TIEALSRRKIFDWAWSVCEKMIETGS--LPDSEKVGKIISWFCKGGKAKEAHVVYTLARE 295
++ R D A S+ +M +PD +++ FCK + EA V++ ++
Sbjct: 118 VLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKK 177
Query: 296 KKMYPPQSVV-AFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDV 354
P V + LI C+ E V L +L++ E K + +SS+I + C D+
Sbjct: 178 GGDCRPNLVTYSVLIDCYCKSGE-VGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDI 236
Query: 355 HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
+ L +M+ P ++ ++ + G A EMLK M +RG++PDV YT L
Sbjct: 237 ETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVL 296
Query: 415 MSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV 474
G G+ +A ++L+ + +TY+ ++ G CK + D A ++ M G
Sbjct: 297 ADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGK 356
Query: 475 QPNVDEYNKLIQSLC 489
+P+ YN L++ LC
Sbjct: 357 KPDAVTYNTLLKGLC 371
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 146/320 (45%), Gaps = 4/320 (1%)
Query: 189 EKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
E+E V + + LI+ F G + E+F++ N TY ++ L R +
Sbjct: 212 EREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRW 271
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
A + + M G PD + CK G+A +A V L +K P +
Sbjct: 272 REASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVV 331
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
++ LC+ED + A +++ + +K ++++++ LC +H A L ++SE
Sbjct: 332 VNGLCKEDR-MDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEK 390
Query: 369 PPPGNAVF--NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
VF N++I K G + A + M GL+ ++ TY L+ GY ++ E
Sbjct: 391 FHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIE 450
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A ++ A ++ + +TY +I G CK++ A L +MKD G++P V +YN L+
Sbjct: 451 ALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMT 510
Query: 487 SLCLKALDWRTAEKLLEDMR 506
SLC + A L ++MR
Sbjct: 511 SLC-REDSLEQARSLFQEMR 529
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 130/300 (43%), Gaps = 13/300 (4%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ LLK +C + E LW ++ + EK V N LI K G+ A + +
Sbjct: 364 NTLLKGLCGAGKIHEAMDLWKLL--LSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHS 421
Query: 222 KFGDYGCVANQETYYFTIEA-LSRRKIFD----WAWSVCEKMIETGSLPDSEKVGKIISW 276
+ G N TY F IE L+ RK+ + W ++V E+G P+S +I+
Sbjct: 422 SMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAV-----ESGFSPNSMTYSVMING 476
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
CK A ++ ++ + P L++SLC+ED +++ A + +
Sbjct: 477 LCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCRED-SLEQARSLFQEMRNVNHNV 535
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ F+ +I + DV AK LLS+M P F+ +I+ +SK G + AM +
Sbjct: 536 DVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLY 595
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
+ M S G P V + L+ GY G+ E+ +L++ L T++ C +
Sbjct: 596 EKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLCHM 655
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 136/337 (40%), Gaps = 16/337 (4%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
K G+ A +V + G TY + L + D A+ V E M++ G PD
Sbjct: 300 LCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPD 359
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY--PPQSVVAFLISSLCQEDETVKLALD 324
+ ++ C GK EA ++ L +K + P LI LC+E V A
Sbjct: 360 AVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGR-VHDAAR 418
Query: 325 MLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
+ + I ++ +I + + A L + G P + ++ +I+
Sbjct: 419 IHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLC 478
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV 444
K ++ A + M+ G++P V Y LM+ +E+A + E + + + V
Sbjct: 479 KMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVV 538
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC-LKALDWRTA--EKL 501
+++ +I G K + A +LL+EM + + P+ ++ LI L LD EK+
Sbjct: 539 SFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKM 598
Query: 502 LE----------DMRLKGLHLNGITRALIRAVKELEE 528
+ D LKG L G T +I + ++ +
Sbjct: 599 VSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMAD 635
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 86/172 (50%), Gaps = 4/172 (2%)
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
S++I +L + + ++ KM+S P +++ ++ + A +L LM
Sbjct: 46 STLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTK 105
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEF 459
RG +VY ++ G+ GQ ++A + ++ K+N+ + P VTY+TL+ G+CK +
Sbjct: 106 RGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRL 165
Query: 460 DCALKLLNEMKDVG-VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
A L MK G +PN+ Y+ LI C K+ + LLE+M +GL
Sbjct: 166 AEARVLFEAMKKGGDCRPNLVTYSVLIDCYC-KSGEVGEGLGLLEEMEREGL 216
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 65/157 (41%), Gaps = 5/157 (3%)
Query: 357 AKTLLSKMISEGP--PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
A +L + I P PP +++I KA + + M S + P + + L
Sbjct: 24 AVSLFHRTIDNDPTSPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSAL 83
Query: 415 MSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV-- 472
+ N A +L+ K ++ + +++G+C+ + D A+ L ++MK
Sbjct: 84 TESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYD 143
Query: 473 GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
V P+ YN L+ C KA A L E M+ G
Sbjct: 144 CVVPDCVTYNTLVNGFC-KAKRLAEARVLFEAMKKGG 179
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 190/430 (44%), Gaps = 44/430 (10%)
Query: 87 DAVESKEEEAYEIDGDKLENVLSLLQSSVDGYLESSLDSFELDLHEDFVLKVLETPLVLG 146
++ ++ + + +D +K+ +L + V LE +L + + +VL G
Sbjct: 86 ESAHDRDADEFSVDVEKVYRILRKFHTRVPK-LELALQESGVIMRSGLPERVLSRCGDAG 144
Query: 147 ENLVCFFKWVTS--GVVDA--LLKAICSSVGK-KEVYALWDIVKEIGEKEKGVLTVEILN 201
FF W + G + + KA+ ++GK ++ A+W +++E+ ++ +LT E+
Sbjct: 145 NLGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFI 204
Query: 202 ELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET 261
L+ F+ + K A EV ++ YGC ++ + ++AL + A S+ E M
Sbjct: 205 VLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDM-RV 263
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
P+ ++ +C+ GK EA V +E P V L+ Q
Sbjct: 264 RFNPNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ------- 316
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A M D F LL++M P A F +I
Sbjct: 317 AGKMRDAFD-----------------------------LLAEMKKVNCGPNAASFTILIQ 347
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
++ K M AM + M+ G + DV TYT L+SG+ G ++A EIL++ +
Sbjct: 348 SFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDP 407
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
S ++Y ++ + K EE + ++L+ EM+ +G P+++ YN +I+ +C K D + A +L
Sbjct: 408 SQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVC-KLGDLKEAVRL 466
Query: 502 LEDMRLKGLH 511
+M+ GL+
Sbjct: 467 WGEMQAGGLN 476
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 127/269 (47%), Gaps = 19/269 (7%)
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL---ALDMLDDFSGEARKYA 337
GK ++ V+ L E + P + + L + +V++ A+++LD E KY
Sbjct: 175 GKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRFASVRMVKKAVEVLD----EMPKYG 230
Query: 338 IKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
+P F ++ +LC+ V A +L M P F S++ + + G + A
Sbjct: 231 CEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVRFNPNLRH-FTSLLYGWCREGKIMEAK 289
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
+L ++ G +PD+ Y L+ GYA G+M +A ++L E KK + + ++ LI+ +
Sbjct: 290 HVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSF 349
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK---LLEDMRLKGL 510
CK E+ D A+++ EM+ G + +V Y LI C W +K +L+DM KG
Sbjct: 350 CKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFC----KWGNTDKAYEILDDMIQKGH 405
Query: 511 HLNGITRALIRAVKELEEDAIENGEALVE 539
+ ++ I E +E+ E E + E
Sbjct: 406 DPSQLSYLCIMMAHEKKEELEECMELIEE 434
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/324 (19%), Positives = 131/324 (40%), Gaps = 48/324 (14%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+ + N L+ +++ GK + AF++ + C N ++ I++ + + D A +
Sbjct: 304 IVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFT 363
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M +G D +IS FCK G +A+ + +K P Q +++L + E
Sbjct: 364 EMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQ--LSYLCIMMAHEK 421
Query: 317 -ETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
E ++ +++++ E RK P ++++IR +C++ D+ A L +M + G P
Sbjct: 422 KEELEECMELIE----EMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNP 477
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL--------------------------- 404
G + ++ + G + A + K M RGL
Sbjct: 478 GLDTYILMVHGFLSQGCLVEACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKN 537
Query: 405 ----------KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+ +V +T + + G ++EAC + P T+ L+RG
Sbjct: 538 MWSCMTTKGCELNVSAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLK 597
Query: 455 KLEEFDCALKLLNEMKDVGVQPNV 478
KL A+++ +++ + +
Sbjct: 598 KLFHRQLAVEITEKVRKMAADRQI 621
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 145/325 (44%), Gaps = 7/325 (2%)
Query: 201 NELIALFSKLGKGKAAFE---VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
N LI + KLG ++ V + + N T+ I+ + + V ++
Sbjct: 262 NTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKE 321
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M++ P+ +I+ C GGK EA + + P LI+ C+ D
Sbjct: 322 MLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKND- 380
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
+K ALDM G+ + ++ +I + C++ + L +M EG P +N
Sbjct: 381 MLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYN 440
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+I+ + G++ A ++ + S+GL PD+ T+ LM GY G+ +A +L E K
Sbjct: 441 CLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKM 499
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM-KDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ +TY+ +++GYCK A + +M K+ ++ NV YN L+Q K
Sbjct: 500 GLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKG-KLE 558
Query: 497 TAEKLLEDMRLKGLHLNGITRALIR 521
A LL +M KGL N IT +++
Sbjct: 559 DANMLLNEMLEKGLVPNRITYEIVK 583
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 145/318 (45%), Gaps = 11/318 (3%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGC-VANQETYYFTIEALSRRKIFDWAWSVCEK 257
I + L+ ++ + + FE F + G YG ++ I L + D + V ++
Sbjct: 155 IADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEY-VYKE 213
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP-PQSVVAF--LISSLCQ 314
MI P+ +I+ CK GK +A V + K+Y +VV++ LI C+
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDV---MEDMKVYGCSPNVVSYNTLIDGYCK 270
Query: 315 EDETVKL--ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
K+ A +L + + F+ +I + ++ G+ + +M+ + P
Sbjct: 271 LGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPN 330
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+NS+I+ G ++ A+ M M S G++P++ TY L++G+ ++EA ++
Sbjct: 331 VISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFG 390
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
K + + Y+ LI YCKL + D L EM+ G+ P+V YN LI LC
Sbjct: 391 SVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNG 450
Query: 493 LDWRTAEKLLEDMRLKGL 510
+ A+KL + + KGL
Sbjct: 451 -NIEAAKKLFDQLTSKGL 467
>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
Length = 696
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 163/361 (45%), Gaps = 18/361 (4%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
LLK +C+ +E L ++ E G+ V +I F K G A+ +F K
Sbjct: 220 TLLKGLCAEKKCEEAAELIHMMAEDGDNCPP--NVVSYTTVIHGFFKEGDVGKAYTLFCK 277
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
D+G N T I+ L + + D A +V ++MI+ +P+ +I + G+
Sbjct: 278 MLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQ 337
Query: 283 AKEA-HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
EA ++ ++R+ + P + LI LC+ + A ++ + +K +
Sbjct: 338 WTEAVRILKEMSRDGQ-RPNVVTYSMLIDCLCKSGLHAE-AREIFNSMIQSGQKPNASTY 395
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
S++ ++ + M+ G PG VFN I AY K G + A M+
Sbjct: 396 GSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQ 455
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEA----CEILNEAKKNHSRLSP--VTYHTLIRGYCK 455
+G PD+ YT ++ G G++++A C+++++ LSP +T++TLI G+
Sbjct: 456 QGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDG------LSPDIITFNTLIHGFAL 509
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
+++ A +L EM D G+ PNV+ +N +I L K A KL + M G N +
Sbjct: 510 HGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKL-FKEGKVTEARKLFDLMPRAGAKPNVV 568
Query: 516 T 516
+
Sbjct: 569 S 569
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 138/305 (45%), Gaps = 3/305 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI + G+ A + + G N TY I+ L + + A + MI+
Sbjct: 326 NSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQ 385
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
+G P++ G ++ + G + + V L + M P + V I + C+ +
Sbjct: 386 SGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDE 445
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
+L + + I +++VI LC++ + A + +MI +G P FN++I
Sbjct: 446 ASL-TFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLI 504
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
++ G A E+ M RG+ P+V T+ ++ G++ EA ++ + + ++
Sbjct: 505 HGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAK 564
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL--DWRTA 498
+ V+Y+T+I GY E +KLL++M +G++P +N L+ + L D T
Sbjct: 565 PNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVVTC 624
Query: 499 EKLLE 503
+ L++
Sbjct: 625 KTLID 629
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 114/278 (41%), Gaps = 9/278 (3%)
Query: 216 AFEVFNKFGDYGC---VANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGK 272
A +FN+ G + T+ I + ++ ++I+TG +
Sbjct: 125 AVSMFNRMARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTP 184
Query: 273 IISWFCKGGKAKEA-HVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDD 328
++ C + +A ++V E P L+ LC E +E +L M +D
Sbjct: 185 LLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAED 244
Query: 329 FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD 388
G+ + +++VI + DV A TL KM+ G PP NSVI K
Sbjct: 245 --GDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQA 302
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHT 448
M A +L+ M + P+ TY L+ GY + GQ EA IL E ++ R + VTY
Sbjct: 303 MDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSM 362
Query: 449 LIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
LI CK A ++ N M G +PN Y L+
Sbjct: 363 LIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLH 400
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 108/303 (35%), Gaps = 54/303 (17%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K G A E+FN G N TY + + +V + M++ G
Sbjct: 363 LIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNG 422
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC---QEDETV 319
P I +CK G+ EA + + +++ P +I LC + D+ +
Sbjct: 423 MRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAM 482
Query: 320 KLALDMLDD--------FSGEARKYA-----------------------IKPFSSVIRSL 348
M+DD F+ +A + F+S+I L
Sbjct: 483 SRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKL 542
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
+ V A+ L M G P +N++I Y AG++ M++L M GLKP
Sbjct: 543 FKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTA 602
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLL 466
T+ L+ G + G L P VT TLI C+ + L L
Sbjct: 603 VTFNTLLDGMVSMG------------------LKPDVVTCKTLIDSCCEDGRIEDILTLF 644
Query: 467 NEM 469
EM
Sbjct: 645 REM 647
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 75/169 (44%), Gaps = 26/169 (15%)
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
ALD+ D+ AR +I + ++ ++ A+ +S + +GP ++FN +
Sbjct: 83 ALDLFDELLQRARPGSIYALNQLLTTV--------ARAPVSSSVRDGPALAVSMFNRM-- 132
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
++AG ++ + PD+ T+ L+S + G + L + K R
Sbjct: 133 --ARAG-------------AKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRA 177
Query: 442 SPVTYHTLIRGYCKLEEFDCALKL-LNEMKDVGVQPNVDEYNKLIQSLC 489
VT+ L+R C + A+ + L M ++G P+V Y L++ LC
Sbjct: 178 QAVTFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLC 226
>gi|50400026|gb|AAT76414.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
Length = 755
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 136/298 (45%), Gaps = 7/298 (2%)
Query: 193 GVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWA 251
GVL VE LN LI + + G + A F+K C+ N T+ I AL D +
Sbjct: 199 GVLPDVETLNWLIEVLCEAGHLELALVQFDKMSKKRCIPNSRTFKILITALCSHGRADES 258
Query: 252 WSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISS 311
+KM++ +PDS +++ FCK K KEA ++ + +E K+ Q + + LI
Sbjct: 259 ADAFDKMLQLRCIPDSSFCVQVLPLFCKFNKLKEARKLHQMMKEYKLQSDQHLYSALIRC 318
Query: 312 LCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
LC E++ + A+ ++D F +++ C + H A L E
Sbjct: 319 LC-ENQLLDDAVTTVNDMIASGHALMRSTFVNIVDCYCTLGQFHKAVNFL----EENDVA 373
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+N ++ + K G + ++ L + SRGL + ++ +++ + N G + A E++
Sbjct: 374 EIEAYNVLLRSLCKTGRVQDSVNYLTELHSRGL-VNCQSWNIVIAQFCNNGNIRRASELI 432
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ TY +++ YCKL + AL + + + N + +++L++SLC
Sbjct: 433 CRMIVSSFTADESTYSSVVSCYCKLGLYKNALDMFRRLDVSNLSLNSESFSQLVESLC 490
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/262 (19%), Positives = 97/262 (37%), Gaps = 1/262 (0%)
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+ + L + + +I+ FC G + A + +S + ++S C+
Sbjct: 401 LHSRGLVNCQSWNIVIAQFCNNGNIRRASELICRMIVSSFTADESTYSSVVSCYCKLG-L 459
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
K ALDM + FS ++ SLC MK + A + G +
Sbjct: 460 YKNALDMFRRLDVSNLSLNSESFSQLVESLCHMKKIQEAAEVFKYHCKRGCNLTSESLEM 519
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I G + A++M L G TY + + + ++ +
Sbjct: 520 LIQESCMVGMIREAIKMRSLAVCTGTSCTFTTYNTIFRALLHLKKEKDVLLLFAHMLMEG 579
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
L+ TY+ ++R + E A L N M G P+ + + L+ + L +L +
Sbjct: 580 CLLNEYTYNCILRYFLTKETIFEAAILFNRMVKDGFVPDQETFELLVPEMALSSLLNMIS 639
Query: 499 EKLLEDMRLKGLHLNGITRALI 520
E LL + + G+ I+ +I
Sbjct: 640 ESLLTVVNMDGMMSPRISNIII 661
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 64/328 (19%), Positives = 129/328 (39%), Gaps = 10/328 (3%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGE-KEKGVLTVEILNELIALFSKLGKGKAAFEVF 220
+ LL+++C + G+ + D V + E +G++ + N +IA F G + A E+
Sbjct: 379 NVLLRSLCKT-GRVQ-----DSVNYLTELHSRGLVNCQSWNIVIAQFCNNGNIRRASELI 432
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ A++ TY + + ++ A + ++ + +SE +++ C
Sbjct: 433 CRMIVSSFTADESTYSSVVSCYCKLGLYKNALDMFRRLDVSNLSLNSESFSQLVESLCHM 492
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
K +EA V+ ++ + LI C ++ A+ M
Sbjct: 493 KKIQEAAEVFKYHCKRGCNLTSESLEMLIQESCMVG-MIREAIKMRSLAVCTGTSCTFTT 551
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++++ R+L +K L + M+ EG +N ++ + + A + M
Sbjct: 552 YNTIFRALLHLKKEKDVLLLFAHMLMEGCLLNEYTYNCILRYFLTKETIFEAAILFNRMV 611
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G PD T+ L+ A + E L +SP + +I G K E F
Sbjct: 612 KDGFVPDQETFELLVPEMALSSLLNMISESLLTVVNMDGMMSPRISNIIIYGLIK-EGFK 670
Query: 461 C-ALKLLNEMKDVGVQPNVDEYNKLIQS 487
A K L++M + G P+ ++ L+ S
Sbjct: 671 SEACKFLDQMIEKGWVPDSRTHSILLSS 698
>gi|255660792|gb|ACU25565.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 418
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 128/284 (45%), Gaps = 18/284 (6%)
Query: 235 YYFTI--EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTL 292
Y+F I + + A SV + + + G P +++ + K G E +
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNA 196
Query: 293 AREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKP----FSSVI 345
+ + P + LI+ LC+E D+ L +MLD + P F+++I
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDK--------GLVPNGVTFTTLI 248
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
C+ V A + +M+S+ P +N++I K GD+ A +++ M +GLK
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLK 308
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
PD +TYT L+ G G +E A E K + RL V Y LI G C+ A K+
Sbjct: 309 PDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
L EM VG++P + Y +I C K W T KLL++M+ G
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVW-TGSKLLKEMQRDG 411
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 138/280 (49%), Gaps = 4/280 (1%)
Query: 239 IEALSRRKIFDWAWSVCEKMIET-GSL-PDSEKVGKIISWFCKGGKAKEAHVVYTLAREK 296
I+ + RK A +V ++ET G+L D +I+ + + G ++A Y L +E
Sbjct: 36 IQIVVSRKGKGSASAVFAAILETKGTLRSDIYVFSGLITAYLESGFLRDAIECYRLTKEH 95
Query: 297 KMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHG 356
K P ++ L + + KL ++ ++ F+ ++ S + ++
Sbjct: 96 KFRVPFDTCRKVLEHLMKL-KYFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRL 154
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A+++ + G P FN++++ Y K GD+ + M++ G++PDVYTY+ L++
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLIN 214
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
G +M++A + +E + VT+ TLI G+CK D A+++ +M + P
Sbjct: 215 GLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSP 274
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++ YN LI LC K D + A+ L+++M +KGL + T
Sbjct: 275 DLITYNTLIYGLCKKG-DLKQAQDLIDEMIMKGLKPDKFT 313
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 113/246 (45%), Gaps = 1/246 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N L+ + KLG F + N G + TY I L + D A + ++M+
Sbjct: 174 FNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEML 233
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G +P+ +I CK G+ A +Y + + P LI LC++ + +
Sbjct: 234 DKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD-L 292
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
K A D++D+ + K ++++I C+ D+ A +MI E + + ++
Sbjct: 293 KQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTAL 352
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
IS + G A +ML+ M S GLKP++ TYT +++ + G + ++L E +++
Sbjct: 353 ISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGY 412
Query: 440 RLSPVT 445
+ S VT
Sbjct: 413 KPSVVT 418
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 111/228 (48%), Gaps = 9/228 (3%)
Query: 301 PQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
P S+ F L+ S +E E ++LA + D + + ++ F++++ ++ D++
Sbjct: 133 PASLYFFNILMHSFVKEGE-IRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGF 191
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
L + M + G P ++ +I+ K M A + M +GL P+ T+T L+ G+
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGH 251
Query: 419 ANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
G+++ A EI + LSP +TY+TLI G CK + A L++EM G++P
Sbjct: 252 CKNGRVDLAMEIYKQMLSQ--SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKP 309
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAV 523
+ Y LI C K D TA + + M + + L+ + ALI +
Sbjct: 310 DKFTYTTLIDGNC-KEGDLETAFEYRKRMIKENIRLDDVAYTALISGL 356
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 82/179 (45%), Gaps = 22/179 (12%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS-EGPPPGNAVFNSVISAYSKAGDMTPAM 393
++ ++ + ++I LC + + AKTL+ ++S +G +AVF ++
Sbjct: 10 RHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAI-------------- 55
Query: 394 EMLKLMRSRG-LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
+ ++G L+ D+Y ++GL++ Y G + +A E K++ R+ T ++
Sbjct: 56 -----LETKGTLRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEH 110
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH 511
KL+ F E + G ++ +N L+ S +K + R A+ + + + GL
Sbjct: 111 LMKLKYFKLVWGFYEENLECGYPASLYFFNILMHSF-VKEGEIRLAQSVFDAITKWGLR 168
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 158/331 (47%), Gaps = 13/331 (3%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGE-KEKGV-LTVEILNELIALFSKLGKGKAAF 217
+VDA K CSS D ++ + E ++KGV T+ N ++ K GK + A
Sbjct: 355 LVDACFKWRCSS----------DALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEAL 404
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
K + G + TY I+A + A+++ ++M+ G D+ + ++
Sbjct: 405 GKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNL 464
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
CK + ++A + ++ P + ++++ +E + AL + D +
Sbjct: 465 CKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKE-YNPEPALRLWDQMIERKLIPS 523
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
I ++++I+ LCRM+ + A L++ + +G P +N +I AY K GD+ A
Sbjct: 524 ISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHN 583
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M KPDV T LM+G G++++A ++ + ++ +TY+TLI+ CK+
Sbjct: 584 KMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVG 643
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ D AL ++M+ G+QP+ YN ++ +L
Sbjct: 644 DVDTALHFFDDMEVKGLQPDAFTYNVVLSAL 674
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 183/462 (39%), Gaps = 59/462 (12%)
Query: 107 VLSLLQSSVDGYLESSLDSF----ELDLHED---FVLKV--------LETPLVLGENLVC 151
VLS L S ++SLD F EL LH + F L V L L +
Sbjct: 177 VLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQG 236
Query: 152 FFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLG 211
F + + LL A C E AL +K G T N L++ F++LG
Sbjct: 237 FGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAP----TQPTYNTLVSAFARLG 292
Query: 212 KGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGS-LPD---- 266
K A +V YG + TY L + D A+ + ++M G+ LPD
Sbjct: 293 WIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTY 352
Query: 267 SEKVGKIISW-------------------------------FCKGGKAKEAHVVYTLARE 295
+ V W CK GK +EA E
Sbjct: 353 NTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAE 412
Query: 296 KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVH 355
+ + P LI + C+ K A ++D+ G+ K ++V+ +LC+MK
Sbjct: 413 EGLAPDVITYNTLIDAYCKAGNVAK-AFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYE 471
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
A+ LL G P + +V++AY K + PA+ + M R L P + TY L+
Sbjct: 472 DAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLI 531
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
G +++EA + LNE + TY+ +I YCK + + A + N+M + +
Sbjct: 532 KGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFK 591
Query: 476 PNVDEYNKLIQSLCLKA-LDWRTAEKLLEDMRLKGLHLNGIT 516
P+V N L+ LCL LD A KL E KG ++ IT
Sbjct: 592 PDVVTCNTLMNGLCLHGKLD--KALKLFESWVEKGKKVDVIT 631
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 126/305 (41%), Gaps = 38/305 (12%)
Query: 191 EKGVLTVEI-LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
++G + E+ ++A + K + A ++++ + + + TY I+ L R +
Sbjct: 482 QRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLK 541
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A + +E G +PD II +CK G + A + E P L+
Sbjct: 542 EAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLM 601
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
+ LC + K AL + + + + +K + ++++I+S+C++ DV A M +G
Sbjct: 602 NGLCLHGKLDK-ALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGL 660
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG----------LKPD------------ 407
P +N V+SA S+AG A ML + G LKP
Sbjct: 661 QPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEG 720
Query: 408 --------------VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
+ TY ++G GGQ++EA +L+E + + TY TL+ G
Sbjct: 721 KPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGL 780
Query: 454 CKLEE 458
K ++
Sbjct: 781 IKRQK 785
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 121/276 (43%), Gaps = 13/276 (4%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ A C + + + L D + G K + LN ++ K+ + + A E+ +
Sbjct: 423 NTLIDAYCKAGNVAKAFTLMDEMVGKGLK----MDTFTLNTVLYNLCKMKRYEDAEELLH 478
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G V ++ +Y + A + + A + ++MIE +P +I C+
Sbjct: 479 SPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRME 538
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP- 340
+ KEA EK + P ++ +I + C+E + L+ F + + + KP
Sbjct: 539 RLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGD-----LENAFRFHNKMVENSFKPD 593
Query: 341 ---FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
++++ LC + A L + +G +N++I + K GD+ A+
Sbjct: 594 VVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFD 653
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
M +GL+PD +TY ++S + G+ EEA +L++
Sbjct: 654 DMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHK 689
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 6/172 (3%)
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISE-GPPPGNAVFNSVISAYSKAGDMTP--AMEMLKLM 399
+ + + R++ H A LL + G P N+V+SA S++ P ++++ + +
Sbjct: 140 AALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSL 199
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
L P+ YT+ L+ + + G + +A L+ + VTY+TL+ +C+
Sbjct: 200 IELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGML 259
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW-RTAEKLLEDMRLKGL 510
A LL MK G+ P YN L+ + L W + A K++E M G
Sbjct: 260 GEARALLARMKRDGIAPTQPTYNTLVSAFA--RLGWIKQATKVVESMTAYGF 309
>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 452
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 158/331 (47%), Gaps = 8/331 (2%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K G+ +AA +V N Y I +L + K+ A+ + +M+
Sbjct: 90 LIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSQMLLKR 149
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD ++ G+ KEA ++ K + P L+ LC+E E +K A
Sbjct: 150 ISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGE-MKKA 208
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++L ++ + ++S++ +K + A + + M G P ++ +I+
Sbjct: 209 RNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVMING 268
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
K + A+ +LK M S+ + P+ TY+ L+ G G++ +A +++NE H+R
Sbjct: 269 LCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEM---HNRGQ 325
Query: 443 P---VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
P +TY++L+ CK + D A+ LL ++KD G+QP++ Y L+ LC K + A+
Sbjct: 326 PADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLC-KNGRLKDAQ 384
Query: 500 KLLEDMRLKGLHLNGITRALIRAVKELEEDA 530
++ + + +KG HL+ + + + ++E++
Sbjct: 385 EVYQILLIKGYHLDSLFDKALSLLSKMEDNG 415
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 144/302 (47%), Gaps = 18/302 (5%)
Query: 210 LGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEK 269
+G+ K A +FN+ + T+ ++ L + A +V MI+ PD
Sbjct: 167 VGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVIT 226
Query: 270 VGKII-SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDD 328
++ +F + K V T+AR + + P + +I+ LC+ + V A+++L +
Sbjct: 227 YNSLMDGYFLVKQENKATFVFNTMAR-RGVTPDVHSYSVMINGLCKT-KMVDEAVNLLKE 284
Query: 329 FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGD 388
++ +SS+I L + + A L+++M + G P +NS++ A K
Sbjct: 285 MHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQ 344
Query: 389 MTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHT 448
+ A+ +L ++ +G++PD+YTYT L+ G G++++A E+
Sbjct: 345 VDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNGRLKDAQEVYQIL-------------- 390
Query: 449 LIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLK 508
LI+GY FD AL LL++M+D G PN + LI++L ++ + E LL +M +
Sbjct: 391 LIKGYHLDSLFDKALSLLSKMEDNGCTPNPVTFEILIRALFENDMNDKAVE-LLREMIAR 449
Query: 509 GL 510
GL
Sbjct: 450 GL 451
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 99/229 (43%), Gaps = 11/229 (4%)
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVA---FLISSLCQE-----D 316
P + GKI F K H V +L+ + ++ Q+ + L++ C +
Sbjct: 6 PTIFEFGKI---FASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLN 62
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ VK L DD + + + ++I LC+ + A +L + P ++
Sbjct: 63 DKVKETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMY 122
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
+++I + K + A ++ M + + PDV TY LM G G+++EA + N+
Sbjct: 123 STIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLL 182
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
+ + T++ L+ G CK E A +L M V P+V YN L+
Sbjct: 183 KNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLM 231
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 6/129 (4%)
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ--- 423
P P F + ++ K + + M RG++ D+ L++ + + GQ
Sbjct: 2 NNPTPTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCL 61
Query: 424 ---MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
++E ++ +L+ V+Y TLI G CK E A+++L + + VQPNV
Sbjct: 62 NDKVKETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVM 121
Query: 481 YNKLIQSLC 489
Y+ +I SLC
Sbjct: 122 YSTIIYSLC 130
Score = 42.0 bits (97), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 92/242 (38%), Gaps = 54/242 (22%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
++ +C + K V +++KE+ K TV + LI K G+ A+++ N+
Sbjct: 264 VMINGLCKT---KMVDEAVNLLKEMHSKSMAPNTVT-YSSLIDGLHKSGRIFDAWDLVNE 319
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ G A+ TY ++AL + D A ++ K+ + G PD ++ CK G+
Sbjct: 320 MHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNGR 379
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
K+A VY + K + LD L D
Sbjct: 380 LKDAQEVYQILLIKGYH-----------------------LDSLFD-------------- 402
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
A +LLSKM G P F +I A + A+E+L+ M +R
Sbjct: 403 -------------KALSLLSKMEDNGCTPNPVTFEILIRALFENDMNDKAVELLREMIAR 449
Query: 403 GL 404
GL
Sbjct: 450 GL 451
>gi|9758456|dbj|BAB08985.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
Length = 949
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 148/348 (42%), Gaps = 17/348 (4%)
Query: 178 YALWDIVKEIGEKEKGVLTVEILNE------------LIALFSKLGKGKAAFEVFNKFGD 225
+ + D + +++KG++ + L E LI L++K+GK A EV +
Sbjct: 453 HTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKE 512
Query: 226 YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKE 285
G N +TY I + K + A++V E M++ G PD IIS FC G
Sbjct: 513 EGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDR 572
Query: 286 AHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVI 345
A ++ + P +I + + ++ +L++ D + F+ +I
Sbjct: 573 AIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD-MRRSLEVFDMMRRCGCVPTVHTFNGLI 631
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
L + A +L +M G + ++ Y+ GD A E +++ GL
Sbjct: 632 NGLVEKRQ---AVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLD 688
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
D++TY L+ G+M+ A + E + + Y+ LI G+ + + A L
Sbjct: 689 VDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADL 748
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
+ +MK GV+P++ Y I S C KA D A + +E+M G+ N
Sbjct: 749 IQQMKKEGVKPDIHTYTSFI-SACSKAGDMNRATQTIEEMEALGVKPN 795
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 135/346 (39%), Gaps = 40/346 (11%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
++ + + G A E F + G Y I A + + D A S KM E G
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 374
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
I+ F K G A+ A + A+ S+ +I + CQ ++ A
Sbjct: 375 IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTC-NMERA 433
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++ + E I + +++ + D + ++ G P + +I+
Sbjct: 434 EALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINL 493
Query: 383 YSKAGDMTPAMEMLKLMR-----------------------------------SRGLKPD 407
Y+K G ++ A+E+ ++M+ G+KPD
Sbjct: 494 YTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPD 553
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
V Y ++S + G M+ A + + E +K R + T+ +I GY K + +L++ +
Sbjct: 554 VILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFD 613
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
M+ G P V +N LI L K R A ++L++M L G+ N
Sbjct: 614 MMRRCGCVPTVHTFNGLINGLVEK----RQAVEILDEMTLAGVSAN 655
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 136/298 (45%), Gaps = 5/298 (1%)
Query: 190 KEKGV-LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
KE+G+ +++ + ++ FSK G +AA F++ N Y I A +
Sbjct: 371 KEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNM 430
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
+ A ++ +M E G ++ + K+ VV+ +E P L
Sbjct: 431 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCL 490
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
I+ + + K AL++ E K+ +K +S +I ++KD A + M+ EG
Sbjct: 491 INLYTKVGKISK-ALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG 549
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P ++N++ISA+ G+M A++ +K M+ +P T+ ++ GYA G M +
Sbjct: 550 MKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSL 609
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
E+ + ++ + T++ LI G L E A+++L+EM GV N Y K++Q
Sbjct: 610 EVFDMMRRCGCVPTVHTFNGLING---LVEKRQAVEILDEMTLAGVSANEHTYTKIMQ 664
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 93/194 (47%), Gaps = 11/194 (5%)
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSV-----------IRSLCRMKDVHGAK 358
SS QE E + +L + D +G+ + I F + ++ R D+H A+
Sbjct: 270 SSWHQEREGSRKSLQRILDTNGDNWQAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRAR 329
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+M + G P + ++ S+I AY+ DM A+ ++ M+ G++ + TY+ ++ G+
Sbjct: 330 ETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGF 389
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
+ G E A +EAK+ H L+ Y +I +C+ + A L+ EM++ G+ +
Sbjct: 390 SKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPI 449
Query: 479 DEYNKLIQSLCLKA 492
Y+ ++ + A
Sbjct: 450 AIYHTMMDGYTMVA 463
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 107/279 (38%), Gaps = 40/279 (14%)
Query: 184 VKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALS 243
VKE+ +K + T +I ++K G + + EVF+ GCV T+ I L
Sbjct: 577 VKEM-QKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLV 635
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS 303
++ A + ++M G + KI+ + G +A +T + + +
Sbjct: 636 EKR---QAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIF 692
Query: 304 VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSK 363
L+ + C+ ++ AL + + S ++ +I R DV A L+ +
Sbjct: 693 TYEALLKACCKSGR-MQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQ 751
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPA------MEMLKL------------------- 398
M EG P + S ISA SKAGDM A ME L +
Sbjct: 752 MKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASL 811
Query: 399 ----------MRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
M++ G+KPD Y L++ + + EA
Sbjct: 812 PEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEA 850
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 158/359 (44%), Gaps = 36/359 (10%)
Query: 168 ICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYG 227
+C ++ ++ + L+ +K +G + V LI F K+G + A F++ G
Sbjct: 465 LCEAMKVEKAFLLFQEMKSVGV----IPDVYTYTILIDSFCKVGLIEQARSWFDEMESVG 520
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH 287
C + TY + A + K A + +M++ G P++ ++ CK G++++A
Sbjct: 521 CSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKAC 580
Query: 288 VVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY-AIKP----FS 342
VY KM V DF E +I P +
Sbjct: 581 EVYA-----KMIGTSDNVG--------------------SDFYFEGEHTDSIAPNVVTYG 615
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
++I LC+ V A+ LL M S G P + +++++I + K G + A E+ M
Sbjct: 616 ALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKC 675
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G P V+TYT L+ +++ A ++L++ ++ + VTY +I G C++ E A
Sbjct: 676 GYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKA 735
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALI 520
LKLL+ M+ G PNV Y LI L K+ + +L M +G N +T R LI
Sbjct: 736 LKLLSMMEKRGCNPNVVTYTSLIDGL-GKSGKVDMSLQLFTQMITQGCAPNYVTYRVLI 793
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 170/404 (42%), Gaps = 33/404 (8%)
Query: 128 LDLHEDF--------VLKVLETPLVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYA 179
L H DF VL+ + TP E V FF W V + A +++ EV
Sbjct: 95 LRRHRDFLNDAVVVAVLRSVRTP----ELCVRFFLWAERQVGYSHTGACYNALA--EVLH 148
Query: 180 LWD-------IVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQ 232
D +++EIGE ++ VL +LN ++ + G A E + D+G +
Sbjct: 149 FDDRARTTERLLREIGEDDREVLG-RLLNVIVRKCCRHGAWAKALEELGRLKDFGYRPSG 207
Query: 233 ETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTL 292
TY ++ L+ D + V ++M E G D VG CK G+ +A V+
Sbjct: 208 ATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGRWSDALVMI-- 265
Query: 293 AREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMK 352
E++ + +V+ + S E A+ L + + + +++ + K
Sbjct: 266 --EREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKK 323
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT 412
+ K ++S M++EG P ++FNS++ +Y A D A ++L M G P Y
Sbjct: 324 QLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYN 383
Query: 413 GLMSGYANGGQMEE------ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
+ +G ++ A ++ E + L+ V R C + +FD A +++
Sbjct: 384 IFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQII 443
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
M G P+ Y+K+I LC +A+ A L ++M+ G+
Sbjct: 444 KLMMRKGFVPDTSTYSKVITFLC-EAMKVEKAFLLFQEMKSVGV 486
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 126/314 (40%), Gaps = 5/314 (1%)
Query: 181 WDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIE 240
W + E+E L + ++I+ + A ++ C+ N TY +
Sbjct: 258 WSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLA 317
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP 300
++K W + M+ G P+ ++ +C A+ + P
Sbjct: 318 GFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPP 377
Query: 301 PQSVVAFLISSLCQEDET-----VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVH 355
V I S+C +E + LA + ++ + ++ R LC M
Sbjct: 378 GYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFD 437
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
A ++ M+ +G P + ++ VI+ +A + A + + M+S G+ PDVYTYT L+
Sbjct: 438 KAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILI 497
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
+ G +E+A +E + S VTY L+ Y K ++ A + + M D G
Sbjct: 498 DSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCA 557
Query: 476 PNVDEYNKLIQSLC 489
PN Y+ L+ LC
Sbjct: 558 PNTITYSALVDGLC 571
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 137/331 (41%), Gaps = 20/331 (6%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
+V L+ + K + A ++F++ D GC N TY ++ L + A V
Sbjct: 524 SVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVY 583
Query: 256 EKMIET----GS------------LPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
KMI T GS P+ G +I CK K +A + +
Sbjct: 584 AKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCE 643
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P + LI C+ + + A ++ S + ++S+I ++ + + + A
Sbjct: 644 PNHIIYDALIDGFCKVGK-LDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIK 702
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
+LS+M+ P + ++I + G+ A+++L +M RG P+V TYT L+ G
Sbjct: 703 VLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLG 762
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
G+++ + ++ + + VTY LI C D A LL+EMK V
Sbjct: 763 KSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQ 822
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
Y ++Q K + + LLE++ G+
Sbjct: 823 GYCSVVQGFSKKFI---ASLGLLEELESHGM 850
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 133/318 (41%), Gaps = 42/318 (13%)
Query: 231 NQETYYFTIEALSR-RKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVV 289
N TY I+ L + K+ D A + + M G P+ +I FCK GK A V
Sbjct: 610 NVVTYGALIDGLCKAHKVVD-AQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEV 668
Query: 290 YTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLC 349
+ + P LI ++ +D + LA+ +L + + ++++I LC
Sbjct: 669 FFRMSKCGYLPTVHTYTSLIDAM-FKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLC 727
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
R+ + A LLS M G P + S+I K+G + ++++ M ++G P+
Sbjct: 728 RIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYV 787
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNH------------------------------- 438
TY L++ G ++EA +L+E K+ +
Sbjct: 788 TYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELES 847
Query: 439 ---SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV---DEYNKLIQSLCLKA 492
++PV Y LI + K + AL+L EM +V N+ D Y LIQ+LCL A
Sbjct: 848 HGMVSIAPV-YGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCL-A 905
Query: 493 LDWRTAEKLLEDMRLKGL 510
A +L ++ KG+
Sbjct: 906 SQLEKAFELYSEITRKGV 923
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 116/339 (34%), Gaps = 59/339 (17%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI------EALSRRKIFDWAW 252
+ N L+ + A+++ N+ GC Y I E L + A
Sbjct: 346 LFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAE 405
Query: 253 SVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSL 312
V E+M+ + + + C GK +A + L K P S
Sbjct: 406 KVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTST-------- 457
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
+S VI LC V A L +M S G P
Sbjct: 458 ----------------------------YSKVITFLCEAMKVEKAFLLFQEMKSVGVIPD 489
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+ +I ++ K G + A M S G P V TYT L+ Y Q+ +A +I +
Sbjct: 490 VYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFH 549
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL----KLLNEMKDVG------------VQP 476
+ +TY L+ G CK E A K++ +VG + P
Sbjct: 550 RMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAP 609
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
NV Y LI LC KA A++LL+ M G N I
Sbjct: 610 NVVTYGALIDGLC-KAHKVVDAQELLDVMSSNGCEPNHI 647
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 143/352 (40%), Gaps = 47/352 (13%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+ +C + + L D++ G + + I + LI F K+GK A EVF +
Sbjct: 616 ALIDGLCKAHKVVDAQELLDVMSSNGCEPNHI----IYDALIDGFCKVGKLDNAQEVFFR 671
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + TY I+A+ + + D A V +M+E+ P+ +I C+ G+
Sbjct: 672 MSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGE 731
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIK 339
++A + ++ ++ P LI L + D +++L M+ G A Y
Sbjct: 732 CQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQ--GCAPNYVT- 788
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMI---------------------------------S 366
+ +I C + A +LLS+M S
Sbjct: 789 -YRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELES 847
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY---TYTGLMSGYANGGQ 423
G V+ +I ++SKAG + A+E+ K M ++ TYT L+ Q
Sbjct: 848 HGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQ 907
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
+E+A E+ +E + + LI+G K+ +++ AL+L M D GV
Sbjct: 908 LEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDEGVN 959
>gi|255660820|gb|ACU25579.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 418
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 165/398 (41%), Gaps = 57/398 (14%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
L++ + S GK A++ + E ++ + + + LI + + G + A E +
Sbjct: 34 TLIQIVVSRKGKGSASAVFAAILETKGTQRS--DIYVFSGLITAYLESGFLRDAIECYRL 91
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
++ +T IE L + K F W E+ +E G ++ FCK G+
Sbjct: 92 TKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHNFCKEGE 151
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAF----------------------------------- 307
+ A V+ + + P SVV+F
Sbjct: 152 IRLAQSVFDSITKWGLRP--SVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTH 209
Query: 308 --LISSLCQE---DETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAK 358
LI+ LC+E D+ +L +MLB+ + P F+++I C+ V A
Sbjct: 210 SVLINGLCKESKMDDANELFDEMLBN--------GLVPNGVTFTTLIDGHCKNGRVDLAM 261
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+ +M+S+ P +N++I K GD+ +++ M +GLKPD TYT L+ G
Sbjct: 262 EIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLIDGN 321
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G +E A E K + RL Y LI G C+ A K+L EM VG++P +
Sbjct: 322 CKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEI 381
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
Y +I C K W T KLL++M+ G N +T
Sbjct: 382 GTYTMIINEFCKKGDVW-TGSKLLKEMQRXGYXPNXVT 418
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS-EGPPPGNAVFNSVISAYSKAGDMTPAM 393
++ ++ + ++I LC + + AKTL+ ++S +G +AVF +++
Sbjct: 10 RHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQ------- 62
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
+ D+Y ++GL++ Y G + +A E K++ R+ T +I
Sbjct: 63 -----------RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHL 111
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
KL+ F E + G ++ +N L+ + C K + R A+ + + + GL
Sbjct: 112 MKLKYFKLVWGFYEESLECGYPASLYFFNILMHNFC-KEGEIRLAQSVFDSITKWGL 167
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 190/430 (44%), Gaps = 44/430 (10%)
Query: 87 DAVESKEEEAYEIDGDKLENVLSLLQSSVDGYLESSLDSFELDLHEDFVLKVLETPLVLG 146
++ ++ + + +D +K+ +L + V LE +L + + +VL G
Sbjct: 63 ESAHDRDADEFSVDVEKVYRILRKFHTRVPK-LELALQESGVIMRSGLPERVLSRCGDAG 121
Query: 147 ENLVCFFKWVTS--GVVDA--LLKAICSSVGK-KEVYALWDIVKEIGEKEKGVLTVEILN 201
FF W + G + + KA+ ++GK ++ A+W +++E+ ++ +LT E+
Sbjct: 122 NLGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFI 181
Query: 202 ELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET 261
L+ F+ + K A EV ++ YGC ++ + ++AL + A S+ E M
Sbjct: 182 VLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDM-RV 240
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
P+ ++ +C+ GK EA V +E P V L+ Q
Sbjct: 241 RFNPNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ------- 293
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A M D F LL++M P A F +I
Sbjct: 294 AGKMRDAFD-----------------------------LLAEMKKVNCGPNAASFTILIQ 324
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
++ K M AM + M+ G + DV TYT L+SG+ G ++A EIL++ +
Sbjct: 325 SFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDP 384
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
S ++Y ++ + K EE + ++L+ EM+ +G P+++ YN +I+ +C K D + A +L
Sbjct: 385 SQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVC-KLGDLKEAVRL 443
Query: 502 LEDMRLKGLH 511
+M+ GL+
Sbjct: 444 WGEMQAGGLN 453
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 127/269 (47%), Gaps = 19/269 (7%)
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL---ALDMLDDFSGEARKYA 337
GK ++ V+ L E + P + + L + +V++ A+++LD E KY
Sbjct: 152 GKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRFASVRMVKKAVEVLD----EMPKYG 207
Query: 338 IKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
+P F ++ +LC+ V A +L M P F S++ + + G + A
Sbjct: 208 CEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVRFNPNLRH-FTSLLYGWCREGKIMEAK 266
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
+L ++ G +PD+ Y L+ GYA G+M +A ++L E KK + + ++ LI+ +
Sbjct: 267 HVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSF 326
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK---LLEDMRLKGL 510
CK E+ D A+++ EM+ G + +V Y LI C W +K +L+DM KG
Sbjct: 327 CKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFC----KWGNTDKAYEILDDMIQKGH 382
Query: 511 HLNGITRALIRAVKELEEDAIENGEALVE 539
+ ++ I E +E+ E E + E
Sbjct: 383 DPSQLSYLCIMMAHEKKEELEECMELIEE 411
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/324 (19%), Positives = 131/324 (40%), Gaps = 48/324 (14%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+ + N L+ +++ GK + AF++ + C N ++ I++ + + D A +
Sbjct: 281 IVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFT 340
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M +G D +IS FCK G +A+ + +K P Q +++L + E
Sbjct: 341 EMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQ--LSYLCIMMAHEK 398
Query: 317 -ETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
E ++ +++++ E RK P ++++IR +C++ D+ A L +M + G P
Sbjct: 399 KEELEECMELIE----EMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNP 454
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL--------------------------- 404
G + ++ + G + A + K M RGL
Sbjct: 455 GLDTYILMVHGFLSQGCLVEACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKN 514
Query: 405 ----------KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+ +V +T + + G ++EAC + P T+ L+RG
Sbjct: 515 MWSCMTTKGCELNVSAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLK 574
Query: 455 KLEEFDCALKLLNEMKDVGVQPNV 478
KL A+++ +++ + +
Sbjct: 575 KLFHRQLAVEITEKVRKMAADRQI 598
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 133/291 (45%), Gaps = 4/291 (1%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+ N +I K G+ A++ N G YGC + +Y + L R ++ A + +M
Sbjct: 318 LCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEM 377
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+ P+ I C+ G ++A + L E L+ C +
Sbjct: 378 VRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGR- 436
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
V AL++ ++ E +++++ LC + + A LL+ MI + P FN
Sbjct: 437 VDSALELFNNLPCEPNTIT---YTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNV 493
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
++S + + G + AME++ M G P++ T+ L+ G EEA E+L+
Sbjct: 494 LVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKG 553
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
L +TY +++ + + + A+++L+ ++D+G++P V YNK++ +LC
Sbjct: 554 VSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALC 604
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 121/288 (42%), Gaps = 13/288 (4%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ A + + GC + TY +EA+ + F A +V ++M G P+
Sbjct: 155 GRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTY 214
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLD 327
II+ C+ G+ +A + P ++ LC D+ L +M+D
Sbjct: 215 NVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVD 274
Query: 328 DFSGEARKYAIK---PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
K + F ++R CR V A +L +M G P + N VI+A
Sbjct: 275 -------KKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAIC 327
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV 444
K G + A + L M G PD +YT ++ G G+ E A E+L E + + + V
Sbjct: 328 KQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEV 387
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
T++T I C+ + A+KL+ M + G + YN L+ C++
Sbjct: 388 TFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQG 435
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 136/316 (43%), Gaps = 5/316 (1%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N L+A + + G+ AA + + TY I L R A ++ + M++
Sbjct: 113 NTLVAGYCRYGRLDAARRLI---ASMPVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQ 169
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P ++ CK EA V R K P +I+ +C+E V
Sbjct: 170 RGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR-VD 228
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A ++L+ S + I +++V++ LC + K L ++M+ + P F+ ++
Sbjct: 229 DAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLV 288
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ + G + A+++L+ M G P+ +++ G++++A + LN
Sbjct: 289 RFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCN 348
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
++Y T++RG C+ ++ A +LL EM PN +N I LC K L A K
Sbjct: 349 PDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGL-IEQAIK 407
Query: 501 LLEDMRLKGLHLNGIT 516
L+E M G + +T
Sbjct: 408 LIELMPEYGCSVGIVT 423
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 115/263 (43%), Gaps = 13/263 (4%)
Query: 257 KMIET----GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LIS 310
+++ET G PD K+I C+ G+ +A V A P V A+ L++
Sbjct: 60 RLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASG--APVDVFAYNTLVA 117
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
C+ + A ++ Y P +IR LC V A LL M+ G
Sbjct: 118 GYCRYGR-LDAARRLIASMPVPPDAYTYTP---IIRGLCDRGRVGDALALLDDMLQRGCQ 173
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P + ++ A K+ AM +L MR++G P++ TY +++G G++++A EI
Sbjct: 174 PSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEI 233
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
LN + V+Y T+++G C +D L EM D PN ++ L++ C
Sbjct: 234 LNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCR 293
Query: 491 KALDWRTAEKLLEDMRLKGLHLN 513
+ R A ++L+ M G N
Sbjct: 294 GGMVER-AIQVLQQMSQHGCTPN 315
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 124/313 (39%), Gaps = 40/313 (12%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
I L RR A V +G+ D +++ +C+ G+ A L +
Sbjct: 81 IRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAAR---RLIASMPV 137
Query: 299 YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
P +I LC V AL +LDD + ++ ++ ++ ++C+ A
Sbjct: 138 PPDAYTYTPIIRGLCDRGR-VGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAM 196
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG- 417
+L +M ++G P +N +I+ + G + A E+L + S G +PD+ +YT ++ G
Sbjct: 197 NVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGL 256
Query: 418 ----------------------------------YANGGQMEEACEILNEAKKNHSRLSP 443
+ GG +E A ++L + ++ +
Sbjct: 257 CAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNT 316
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
+ +I CK D A LN M G P+ Y +++ LC +A W A++LL
Sbjct: 317 TLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLC-RAGRWEHAKELLP 375
Query: 504 DMRLKGLHLNGIT 516
+M K N +T
Sbjct: 376 EMVRKNCPPNEVT 388
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 8/178 (4%)
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
+R L D+ A L+ S G P + +I + G + A +L+ + G
Sbjct: 46 LRRLIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGA 105
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCA 462
DV+ Y L++GY G+++ A ++ + P TY +IRG C A
Sbjct: 106 PVDVFAYNTLVAGYCRYGRLDAARRLIASMP-----VPPDAYTYTPIIRGLCDRGRVGDA 160
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
L LL++M G QP+V Y L++++C K+ + A +L++MR KG N +T +I
Sbjct: 161 LALLDDMLQRGCQPSVVTYTVLLEAVC-KSSGFGEAMNVLDEMRAKGCTPNIVTYNVI 217
>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
succulentifolia]
Length = 429
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 161/388 (41%), Gaps = 51/388 (13%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
L++ + S GK A++ + E ++ + + + +I + + G + A E +
Sbjct: 38 TLIQIVVSRKGKGSASAVFAAILETKGTQRS--DIYVFSGIITAYLESGFLRDAIECYRL 95
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
++ +T +E L + K F W E+ +E G ++ FCK G+
Sbjct: 96 TKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGE 155
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAF----------------------------------- 307
+ A V+ + + P SVV+F
Sbjct: 156 IRLAQSVFDAITKWGLRP--SVVSFNTLMNGYIKLGDLNEXFRLKKAMQASGVQPDVYTY 213
Query: 308 --LISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLL 361
LI+ LC+E + +D ++ E + P F+++I C+ V A +
Sbjct: 214 SVLINGLCKESK-----MDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVDLAMEIY 268
Query: 362 SKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG 421
+M+S+ P +N++I K GD+ A +++ M +GLKPD TYT L+ G
Sbjct: 269 KQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKE 328
Query: 422 GQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEY 481
G +E A E K + RL V Y LI G C+ A K+L EM VG++P + Y
Sbjct: 329 GDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTY 388
Query: 482 NKLIQSLCLKALDWRTAEKLLEDMRLKG 509
+I C K W T KL+++M+ G
Sbjct: 389 TMIINEFCKKGDVW-TGSKLMKEMQRDG 415
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 132/291 (45%), Gaps = 5/291 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ + C + +++D + + G + +V N L+ + KLG F +
Sbjct: 144 NILMHSFCKEGEIRLAQSVFDAITKWGLRP----SVVSFNTLMNGYIKLGDLNEXFRLKK 199
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G + TY I L + D + ++M++ G +P+ +I CK G
Sbjct: 200 AMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNG 259
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ A +Y + + P LI LC++ + +K A D++D+ S + K +
Sbjct: 260 RVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGD-LKQAQDLIDEMSMKGLKPDKITY 318
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+++I C+ D+ A +MI E + + ++IS + G A +ML+ M S
Sbjct: 319 TTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 378
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
GLKP++ TYT +++ + G + +++ E +++ S VTY+ L+ G
Sbjct: 379 VGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVTYNVLMNG 429
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 126/291 (43%), Gaps = 1/291 (0%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
++ N L+ F K G+ + A VF+ +G + ++ + + + + +
Sbjct: 139 SLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEXFRLK 198
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+ M +G PD +I+ CK K + + ++ + + P LI C+
Sbjct: 199 KAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKN 258
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
V LA+++ ++ + ++++I LC+ D+ A+ L+ +M +G P
Sbjct: 259 GR-VDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKIT 317
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+ ++I K GD+ A E M ++ D YT L+SG G+ +A ++L E
Sbjct: 318 YTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 377
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
+ TY +I +CK + KL+ EM+ G P+V YN L+
Sbjct: 378 SVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVTYNVLMN 428
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 99/235 (42%), Gaps = 54/235 (22%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS-EGPPPGNA-----------------VF 376
++ ++ + ++I LC + + AKTL+ ++S +G +A VF
Sbjct: 14 RHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVF 73
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSR---------------------------------- 402
+ +I+AY ++G + A+E +L +
Sbjct: 74 SGIITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLE 133
Query: 403 -GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G +Y + LM + G++ A + + K R S V+++TL+ GY KL + +
Sbjct: 134 CGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNE 193
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+L M+ GVQP+V Y+ LI LC K +L ++M GL NG+T
Sbjct: 194 XFRLKKAMQASGVQPDVYTYSVLINGLC-KESKMDDXNELFDEMLDXGLVPNGVT 247
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 159/355 (44%), Gaps = 14/355 (3%)
Query: 158 SGVVDALLKAICSSVGKKEVYALWD--IVKEIGEKEKGVLTVEILNELIALFSKLGKGKA 215
S ++DAL K S E Y L+ VK I V + LI F +GK K
Sbjct: 451 STIIDALCKYQLVS----EAYGLFSEMTVKGISAD------VVTYSTLIYGFCIVGKLKE 500
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A + N+ + TY ++AL + A SV M++ PD +++
Sbjct: 501 AIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMN 560
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
+ + K+A V+ + P LI+ C+ + V AL++ + +
Sbjct: 561 GYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKS-KMVDEALNLFKEMHQKNMV 619
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+SS++ LC+ + L+ +M G P +NS+I K G + A+ +
Sbjct: 620 PDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIAL 679
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
M+ +G++P+ +T+T L+ G GG++++A E+ + L Y+ +I G+CK
Sbjct: 680 FNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCK 739
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+ AL +L++M++ G PN ++ +I +L K + AEKLL M +GL
Sbjct: 740 QGLLEEALTMLSKMEENGCIPNAVTFDIIINAL-FKKDENDKAEKLLRQMIARGL 793
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 144/317 (45%), Gaps = 2/317 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N+++ F+K+ A + ++ G + T I + +SV K++
Sbjct: 310 FNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKIL 369
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G P + + +I C G+ K+A + + Q A LI+ +C+ +T
Sbjct: 370 KRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDT- 428
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
+ A+ +L G K ++ +S++I +LC+ + V A L S+M +G ++++
Sbjct: 429 RGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTL 488
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I + G + A+ +L M + + PDV TYT L+ G+++EA +L K
Sbjct: 489 IYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACV 548
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
+ TY+TL+ GY + E A + N M +GV P+V Y LI C K+ A
Sbjct: 549 KPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFC-KSKMVDEAL 607
Query: 500 KLLEDMRLKGLHLNGIT 516
L ++M K + + +T
Sbjct: 608 NLFKEMHQKNMVPDTVT 624
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 127/258 (49%), Gaps = 4/258 (1%)
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
+ SV K+++ G PD+ + +I C G+ KEA + + Q A LI+
Sbjct: 47 SLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLIN 106
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
+C+ +T + A+ L G K ++ ++++I +LC+ + V A L S+M +G
Sbjct: 107 GVCRIGDT-RAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGIS 165
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
++++I + G + A+ +L +M + + P+V TY L+ G+++EA +
Sbjct: 166 ANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSV 225
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC- 489
L K + + +TY TL+ GY + E A + N M +GV P+V YN +I C
Sbjct: 226 LAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCK 285
Query: 490 LKALDWRTAEKLLEDMRL 507
+K +D A L ++M L
Sbjct: 286 IKRVD--KALNLFKEMIL 301
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 154/379 (40%), Gaps = 40/379 (10%)
Query: 161 VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVF 220
++ L+K +C KE D + G + V ++N + ++G +AA +
Sbjct: 66 LNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGV----CRIGDTRAAIKFL 121
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
K N E Y I+AL + ++ A+ + +M G + +I FC
Sbjct: 122 RKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIV 181
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET---------------------- 318
GK KEA + + K + P L+ +LC+E +
Sbjct: 182 GKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITY 241
Query: 319 ------------VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
VK A + + S + ++ +I C++K V A L +MI
Sbjct: 242 STLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMIL 301
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
PP FN ++ +++K + A+ + + +G++PD++T L++ + + GQ+
Sbjct: 302 SRFPP-IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITF 360
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
+L + K S VT +TLI+G C + AL +++ G Q N Y LI
Sbjct: 361 GFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLIN 420
Query: 487 SLCLKALDWRTAEKLLEDM 505
+C K D R A KLL +
Sbjct: 421 GVC-KIGDTRGAIKLLRKI 438
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 65/125 (52%), Gaps = 1/125 (0%)
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
++ +L + RG PD T L+ G GQ++EA ++ +L+ V+Y TLI
Sbjct: 47 SLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLIN 106
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH 511
G C++ + A+K L ++ +PNV+ YN +I +LC L A L +M +KG+
Sbjct: 107 GVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQL-VSEAYGLFSEMTVKGIS 165
Query: 512 LNGIT 516
N +T
Sbjct: 166 ANVVT 170
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 167/359 (46%), Gaps = 6/359 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ +C + + + D +KE G ++TV I+ I K K A +F
Sbjct: 416 NILIDMLCKAGELEAALKVQDTMKEAG-LFPNIMTVNIM---IDRLCKAQKLDEACSIFL 471
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
C + T+ I+ L RR D A+S+ EKM+++ +P+ +I F K G
Sbjct: 472 GLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCG 531
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ ++ H +Y + P ++ + + + E K + ++ + ++ +
Sbjct: 532 RKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEK-GRALFEEIKAQGLVPDVRSY 590
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
S +I L + L +M +G +N+VI + K+G + A ++L+ M++
Sbjct: 591 SILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKT 650
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
+GL+P V TY ++ G A +++EA + EAK L+ V Y +LI G+ K+ D
Sbjct: 651 KGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDE 710
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
A +L E+ G+ PN +N L+ +L +KA + A+ ++M+ N +T +++
Sbjct: 711 AYLILEELMQKGLTPNSYTWNCLLDAL-VKAEEIDEAQVCFQNMKNLKCSPNAMTYSIM 768
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 147/330 (44%), Gaps = 12/330 (3%)
Query: 189 EKEKGVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKI 247
+K KG + +V N ++ + GK + A + ++ N TY I+ L +
Sbjct: 369 QKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQ-DAAPNLTTYNILIDMLCKAGE 427
Query: 248 FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF 307
+ A V + M E G P+ V +I CK K EA ++ K P
Sbjct: 428 LEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCS 487
Query: 308 LISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM 364
LI L + D+ L MLD S + + ++S+I++ + + +M
Sbjct: 488 LIDGLGRRGRVDDAYSLYEKMLD--SDQIPNVVV--YTSLIQNFFKCGRKEDGHKIYKEM 543
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
+ G P + NS + KAG++ + + ++++GL PDV +Y+ L+ G G
Sbjct: 544 VHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFS 603
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
E ++ E K+ L + Y+T+I G+CK + D A +LL EMK G+QP V Y +
Sbjct: 604 RETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSV 663
Query: 485 IQSLC-LKALDWRTAEKLLEDMRLKGLHLN 513
+ L + LD A L E+ + G+ LN
Sbjct: 664 VDGLAKIDRLD--EAYMLFEEAKSIGVDLN 691
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 113/256 (44%), Gaps = 1/256 (0%)
Query: 233 ETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTL 292
E Y + ++R + D+ + E+M G + ++++ F K K KEA V +
Sbjct: 134 EVYNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEM 193
Query: 293 AREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMK 352
R+ K P S LI +L + + L + + + F++++R R
Sbjct: 194 MRKFKFRPAFSAYTTLIGALSAANRPDPM-LTLFHQMQEIGYEANVHLFTTLVRVFAREG 252
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT 412
+ A +LL +M S ++N I + K G + A + M+++GL PD TYT
Sbjct: 253 RIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYT 312
Query: 413 GLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
L+ +++EA E+ E N S Y+T+I GY +FD A LL K
Sbjct: 313 TLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRK 372
Query: 473 GVQPNVDEYNKLIQSL 488
G P+V YN ++ L
Sbjct: 373 GCIPSVIAYNCILTCL 388
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/314 (20%), Positives = 136/314 (43%), Gaps = 2/314 (0%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
V + LI F K G+ + +++ + GC + ++ + + + ++
Sbjct: 516 NVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALF 575
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
E++ G +PD +I K G ++E + ++ +E+ ++ +I C+
Sbjct: 576 EEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKS 635
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ K A +L++ + + + + SV+ L ++ + A L + S G +
Sbjct: 636 GKVDK-AYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVI 694
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
++S+I + K G + A +L+ + +GL P+ YT+ L+ +++EA K
Sbjct: 695 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMK 754
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+ +TY +I G C + +F+ A EM+ G++PN Y +I L KA +
Sbjct: 755 NLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLA-KAGNV 813
Query: 496 RTAEKLLEDMRLKG 509
A L + + G
Sbjct: 814 MEARGLFDRFKASG 827
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 127/292 (43%), Gaps = 10/292 (3%)
Query: 202 ELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET 261
EL+A F K K K AF V + Y I ALS D ++ +M E
Sbjct: 173 ELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEI 232
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
G + ++ F A+E + L+ +M ++ ++C +
Sbjct: 233 GYEANVHLFTTLVRVF-----AREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVG 287
Query: 322 ALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
+DM F E + + P ++++I LC+ + + A L ++ P +N
Sbjct: 288 KVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYN 347
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
++I Y AG A +L+ + +G P V Y +++ G++EEA I +E +++
Sbjct: 348 TMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQD 407
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + TY+ LI CK E + ALK+ + MK+ G+ PN+ N +I LC
Sbjct: 408 AAP-NLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLC 458
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 137/320 (42%), Gaps = 6/320 (1%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+LN + K G+ + +F + G V + +Y I L + + + +M
Sbjct: 554 LLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEM 613
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
E G D +I FCK GK +A+ + + K + P ++ L + D
Sbjct: 614 KEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDR- 672
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+ A + ++ + +SS+I ++ + A +L +++ +G P + +N
Sbjct: 673 LDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNC 732
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
++ A KA ++ A + M++ P+ TY+ +++G + +A E +K
Sbjct: 733 LLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQG 792
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL--CLKALDWR 496
+ + +TY T+I G K A L + K G P+ YN +I+ L KA+D
Sbjct: 793 LKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMD-- 850
Query: 497 TAEKLLEDMRLKGLHLNGIT 516
A + E+ RLKG +N T
Sbjct: 851 -AYIVFEETRLKGCRVNSKT 869
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 157/387 (40%), Gaps = 28/387 (7%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
L+ A+ ++ + L+ ++EIG + V + L+ +F++ G+ AA + ++
Sbjct: 208 TLIGALSAANRPDPMLTLFHQMQEIGYEA----NVHLFTTLVRVFAREGRIDAALSLLDE 263
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
A+ Y I+ + D AW +M G +PD +I CK +
Sbjct: 264 MKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARR 323
Query: 283 AKEAHVVY---TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
EA ++ L R + + S + DE A +L+ + ++
Sbjct: 324 LDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDE----AYSLLERQKRKGCIPSVI 379
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
++ ++ L R V A + +M + P +N +I KAG++ A+++ M
Sbjct: 380 AYNCILTCLGRKGKVEEALRIHDEM-RQDAAPNLTTYNILIDMLCKAGELEAALKVQDTM 438
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLE 457
+ GL P++ T ++ +++EAC I +H SP T+ +LI G +
Sbjct: 439 KEAGLFPNIMTVNIMIDRLCKAQKLDEACSIF--LGLDHKVCSPDSRTFCSLIDGLGRRG 496
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG-----LHL 512
D A L +M D PNV Y LIQ+ K K+ ++M +G + L
Sbjct: 497 RVDDAYSLYEKMLDSDQIPNVVVYTSLIQNF-FKCGRKEDGHKIYKEMVHRGCSPDLMLL 555
Query: 513 NGITRALIRAVKELEEDAIENGEALVE 539
N + +A +E G AL E
Sbjct: 556 NSYMDCVFKA------GEVEKGRALFE 576
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 87/177 (49%), Gaps = 5/177 (2%)
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
G + +++ +S ++S ++K+ G ++ K P + + ++I A S A
Sbjct: 165 GLSNHVSVELVASFVKSH-KLKEAFGVIEMMRKFKFR---PAFSAYTTLIGALSAANRPD 220
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
P + + M+ G + +V+ +T L+ +A G+++ A +L+E K N V Y+ I
Sbjct: 221 PMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCI 280
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRL 507
+ K+ + D A K +EMK G+ P+ Y LI LC KA A +L E++ L
Sbjct: 281 DCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLC-KARRLDEAVELFEELDL 336
>gi|7413543|emb|CAB86023.1| putative protein [Arabidopsis thaliana]
Length = 880
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 148/348 (42%), Gaps = 17/348 (4%)
Query: 178 YALWDIVKEIGEKEKGVLTVEILNE------------LIALFSKLGKGKAAFEVFNKFGD 225
+ + D + +++KG++ + L E LI L++K+GK A EV +
Sbjct: 453 HTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKE 512
Query: 226 YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKE 285
G N +TY I + K + A++V E M++ G PD IIS FC G
Sbjct: 513 EGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDR 572
Query: 286 AHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVI 345
A ++ + P +I + + ++ +L++ D + F+ +I
Sbjct: 573 AIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD-MRRSLEVFDMMRRCGCVPTVHTFNGLI 631
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
L + A +L +M G + ++ Y+ GD A E +++ GL
Sbjct: 632 NGLVEKRQ---AVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLD 688
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
D++TY L+ G+M+ A + E + + Y+ LI G+ + + A L
Sbjct: 689 VDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADL 748
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
+ +MK GV+P++ Y I S C KA D A + +E+M G+ N
Sbjct: 749 IQQMKKEGVKPDIHTYTSFI-SACSKAGDMNRATQTIEEMEALGVKPN 795
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 135/346 (39%), Gaps = 40/346 (11%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
++ + + G A E F + G Y I A + + D A S KM E G
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 374
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
I+ F K G A+ A + A+ S+ +I + CQ ++ A
Sbjct: 375 IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTC-NMERA 433
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++ + E I + +++ + D + ++ G P + +I+
Sbjct: 434 EALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINL 493
Query: 383 YSKAGDMTPAMEMLKLMR-----------------------------------SRGLKPD 407
Y+K G ++ A+E+ ++M+ G+KPD
Sbjct: 494 YTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPD 553
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
V Y ++S + G M+ A + + E +K R + T+ +I GY K + +L++ +
Sbjct: 554 VILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFD 613
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
M+ G P V +N LI L K R A ++L++M L G+ N
Sbjct: 614 MMRRCGCVPTVHTFNGLINGLVEK----RQAVEILDEMTLAGVSAN 655
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 136/298 (45%), Gaps = 5/298 (1%)
Query: 190 KEKGV-LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
KE+G+ +++ + ++ FSK G +AA F++ N Y I A +
Sbjct: 371 KEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNM 430
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
+ A ++ +M E G ++ + K+ VV+ +E P L
Sbjct: 431 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCL 490
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
I+ + + K AL++ E K+ +K +S +I ++KD A + M+ EG
Sbjct: 491 INLYTKVGKISK-ALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG 549
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P ++N++ISA+ G+M A++ +K M+ +P T+ ++ GYA G M +
Sbjct: 550 MKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSL 609
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
E+ + ++ + T++ LI G L E A+++L+EM GV N Y K++Q
Sbjct: 610 EVFDMMRRCGCVPTVHTFNGLING---LVEKRQAVEILDEMTLAGVSANEHTYTKIMQ 664
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 93/194 (47%), Gaps = 11/194 (5%)
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSV-----------IRSLCRMKDVHGAK 358
SS QE E + +L + D +G+ + I F + ++ R D+H A+
Sbjct: 270 SSWHQEREGSRKSLQRILDTNGDNWQAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRAR 329
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+M + G P + ++ S+I AY+ DM A+ ++ M+ G++ + TY+ ++ G+
Sbjct: 330 ETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGF 389
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
+ G E A +EAK+ H L+ Y +I +C+ + A L+ EM++ G+ +
Sbjct: 390 SKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPI 449
Query: 479 DEYNKLIQSLCLKA 492
Y+ ++ + A
Sbjct: 450 AIYHTMMDGYTMVA 463
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 107/279 (38%), Gaps = 40/279 (14%)
Query: 184 VKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALS 243
VKE+ +K + T +I ++K G + + EVF+ GCV T+ I L
Sbjct: 577 VKEM-QKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLV 635
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS 303
++ A + ++M G + KI+ + G +A +T + + +
Sbjct: 636 EKR---QAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIF 692
Query: 304 VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSK 363
L+ + C+ ++ AL + + S ++ +I R DV A L+ +
Sbjct: 693 TYEALLKACCKSGR-MQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQ 751
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPA------MEMLKL------------------- 398
M EG P + S ISA SKAGDM A ME L +
Sbjct: 752 MKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASL 811
Query: 399 ----------MRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
M++ G+KPD Y L++ + + EA
Sbjct: 812 PEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEA 850
>gi|255660840|gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 418
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 130/291 (44%), Gaps = 18/291 (6%)
Query: 228 CVANQETYYFTI--EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKE 285
C Y+F I + + A SV + + + G P +++ + K G E
Sbjct: 130 CRYPASLYFFNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLDE 189
Query: 286 AHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKP-- 340
+ + + P + LI+ LC+E DE KL +MLD + P
Sbjct: 190 GFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDR--------GLVPNG 241
Query: 341 --FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
F+++I C+ + A + +M+S+G P +N++I K GD+ A ++
Sbjct: 242 VTFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDE 301
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M +GLKPD TYT L+ G G +E A E K + RL V+Y LI G CK
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGR 361
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
A K+L EM VG++P+ Y ++ C K D + KLL++M+ G
Sbjct: 362 SVDAEKMLREMLSVGLKPDTGTYTIVMHEFC-KNGDVKMGSKLLKEMQRDG 411
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 136/280 (48%), Gaps = 4/280 (1%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSE--KVGKIISWFCKGGKAKEAHVVYTLAREK 296
I+ + RK D A +V ++ET S+ +I+ + + G ++A + L RE
Sbjct: 36 IQIVVSRKGKDSASAVFATILETKGAQRSDIYVFSGLITAYLESGFLRDAIECFRLTREN 95
Query: 297 KMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHG 356
K + P ++ L + + KL + ++ F+ ++ C+ ++
Sbjct: 96 KYWVPFDTCRKVLEHL-MKLKYFKLVWSFYKEILECRYPASLYFFNILMDRFCKEGEIRL 154
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A+++ + G P FN++++ Y K GD+ + M + G++PDVYTY+ L++
Sbjct: 155 AQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMHASGVQPDVYTYSVLIN 214
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
G +M+EA ++ +E + VT+ TLI G+CK + D A+++ +M G P
Sbjct: 215 GLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSP 274
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ YN LI LC K D A+ L ++M +KGL + IT
Sbjct: 275 DXITYNTLIYGLCKKG-DLXQAKDLXDEMSMKGLKPDKIT 313
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 128/299 (42%), Gaps = 2/299 (0%)
Query: 180 LWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTI 239
+W KEI E ++ N L+ F K G+ + A VF+ +G + ++ +
Sbjct: 120 VWSFYKEILECRYPA-SLYFFNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLM 178
Query: 240 EALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY 299
+ D + + M +G PD +I+ CK K EAH ++ ++ +
Sbjct: 179 NGYIKLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLV 238
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P LI C+ + + LA+++ + ++++I LC+ D+ AK
Sbjct: 239 PNGVTFTTLIDGHCKNGK-LDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKD 297
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
L +M +G P + ++I K GD+ A E K M ++ D +YT L+SG
Sbjct: 298 LXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLC 357
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G+ +A ++L E + TY ++ +CK + KLL EM+ G P V
Sbjct: 358 KEGRSVDAEKMLREMLSVGLKPDTGTYTIVMHEFCKNGDVKMGSKLLKEMQRDGHVPCV 416
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 108/226 (47%), Gaps = 5/226 (2%)
Query: 301 PQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
P S+ F L+ C+E E ++LA + D + + ++ F++++ ++ D+
Sbjct: 133 PASLYFFNILMDRFCKEGE-IRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
L S M + G P ++ +I+ K M A ++ M RGL P+ T+T L+ G+
Sbjct: 192 RLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGH 251
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G+++ A EI + +TY+TLI G CK + A L +EM G++P+
Sbjct: 252 CKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDK 311
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRAV 523
Y LI C K D TA + + M + + L+ ++ ALI +
Sbjct: 312 ITYTTLIDGSC-KEGDLETAFEYRKRMIKENIRLDDVSYTALISGL 356
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 1/208 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K K A ++F++ D G V N T+ I+ + D A + ++M+ G
Sbjct: 212 LINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQMLSQG 271
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD +I CK G +A + K + P + LI C+E + ++ A
Sbjct: 272 FSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCKEGD-LETA 330
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+ E + ++++I LC+ A+ +L +M+S G P + V+
Sbjct: 331 FEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREMLSVGLKPDTGTYTIVMHE 390
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
+ K GD+ ++LK M+ G P V T
Sbjct: 391 FCKNGDVKMGSKLLKEMQRDGHVPCVIT 418
>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 578
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 154/338 (45%), Gaps = 25/338 (7%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
+++ +K+ A +++ G V T+ I D+A+SV K++
Sbjct: 57 FTKILGTIAKMRYYATAIDLYTLMEYKGVVPFTVTFNILINCFCHMGQMDFAFSVMGKIL 116
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED-ET 318
+ G P+ ++ FC K +A +Y +++ + LI+ LC+
Sbjct: 117 KWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVARRIRFDDVLYGTLINGLCKSKIGK 176
Query: 319 VKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
+ A+ +L E R+ +KP +++V+ LC+ +++ A+ L SKMI +G P
Sbjct: 177 PRAAVQLLQKM--EERQ-LVKPNLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFPDIF 233
Query: 375 VFNSVISAYSKAGD----------------MTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
++S+I +AG + A E+ +M RG + D+ Y LM+GY
Sbjct: 234 TYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGY 293
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
++ EA ++ + + + +TY L+ GYC +++ D A L + M + G+ P+V
Sbjct: 294 CLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDV 353
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
YN LI+ C K A LLEDM LK L N IT
Sbjct: 354 WSYNILIKGYC-KFERVGEAMNLLEDMFLKNLVPNIIT 390
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 142/331 (42%), Gaps = 28/331 (8%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEK--GVLTVEILNELIALFSKLGKGKAAFEVF 220
L+K C V K + AL+ + + + + VL ++N L SK+GK +AA ++
Sbjct: 129 TLMKGFC--VNDKMLDALYIYDEMVARRIRFDDVLYGTLINGLCK--SKIGKPRAAVQLL 184
Query: 221 NKFGDYGCV-ANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
K + V N Y + L + + A +C KMI G PD +I C+
Sbjct: 185 QKMEERQLVKPNLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCR 244
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
G+ KE V L++ C ++ V A ++ + ++ I
Sbjct: 245 AGQRKE-------------------VTSLLNGFCLNNK-VDEARELFNVMIERGEQHDII 284
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
++ ++ C V A+ L M+ G P + ++ Y + A + M
Sbjct: 285 NYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEARNLFHGM 344
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
RGL PDV++Y L+ GY ++ EA +L + + + +TY++++ G CK
Sbjct: 345 IERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGI 404
Query: 460 DCALKLLNEMKD-VGVQPNVDEYNKLIQSLC 489
A KL++EM P+V YN L++SLC
Sbjct: 405 LDAWKLVDEMHYCCQPPPDVTTYNILLESLC 435
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 150/353 (42%), Gaps = 43/353 (12%)
Query: 161 VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVF 220
V +LL C + E L++++ E GE+ ++ IL L +K+G+ + F +
Sbjct: 251 VTSLLNGFCLNNKVDEARELFNVMIERGEQHD-IINYNILMNGYCLNNKVGEARKLFHM- 308
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
M+E G PD+ ++ +C
Sbjct: 309 -------------------------------------MVERGEQPDTITYTILMHGYCLI 331
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
K EA ++ E+ + P LI C+ E V A+++L+D + I
Sbjct: 332 DKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKF-ERVGEAMNLLEDMFLKNLVPNIIT 390
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKM-ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK-L 398
++SV+ LC+ + A L+ +M PPP +N ++ + + + A+ K L
Sbjct: 391 YNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHL 450
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
+ R P+V++Y L+SG +++EA + N + VTY+ L+ ++
Sbjct: 451 IFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQ 510
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH 511
D A+ LL ++ D G+ PN+ YN LI L K +TA+K+ + ++G H
Sbjct: 511 LDKAIALLVQIVDQGISPNLRTYNILINGL-HKGGRPKTAQKISLYLSIRGYH 562
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 9/209 (4%)
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+I F+ ++ ++ +M+ A L + M +G P FN +I+ + G M A ++
Sbjct: 53 SIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFTVTFNILINCFCHMGQMDFAFSVM 112
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC-- 454
+ G +P+V T+T LM G+ +M +A I +E R V Y TLI G C
Sbjct: 113 GKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVARRIRFDDVLYGTLINGLCKS 172
Query: 455 KLEEFDCALKLLNEMKDVG-VQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
K+ + A++LL +M++ V+PN+ YN ++ LC K + A L M ++G+ +
Sbjct: 173 KIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLC-KDGNINEARVLCSKMIVQGIFPD 231
Query: 514 GITRA-----LIRAVKELEEDAIENGEAL 537
T + L RA + E ++ NG L
Sbjct: 232 IFTYSSLIYGLCRAGQRKEVTSLLNGFCL 260
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 82/168 (48%), Gaps = 3/168 (1%)
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
+P S +S C+ + A L +M+ P P F ++ +K A+++ L
Sbjct: 22 QPLPS--QSTCKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTL 79
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
M +G+ P T+ L++ + + GQM+ A ++ + K R + VT+ TL++G+C ++
Sbjct: 80 MEYKGVVPFTVTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDK 139
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL-DWRTAEKLLEDM 505
AL + +EM ++ + Y LI LC + R A +LL+ M
Sbjct: 140 MLDALYIYDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKM 187
>gi|449449102|ref|XP_004142304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Cucumis sativus]
gi|449510601|ref|XP_004163711.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Cucumis sativus]
Length = 849
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 129/272 (47%), Gaps = 2/272 (0%)
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
D A S+ E M++ G D +I CK + KE++ + + ++ P +
Sbjct: 472 DAALSLFEDMVQLGCERDQLLYNNLIDALCKSDRLKESYKLLRDMEQSRLQPTHFTYNSI 531
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
LC+ ++TV A+++L + G + IK + +++ LC+ A L+ M+ EG
Sbjct: 532 FGCLCRREDTVG-AIELLREMRGHGHEPWIKHSTLLVKQLCKNGRAIEASNFLADMVCEG 590
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P +++ + K + A+E+ + + +RG +PDV ++ L+ GY G++ EA
Sbjct: 591 FLPDIVSYSAAMDGLVKINKLDRALELFQDICTRGCRPDVVSHNILIKGYCKAGKVNEAY 650
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
L++ + S V+Y+ LI +CK + D A+ L++M + +P + Y LI
Sbjct: 651 NFLHKMRVAGLVPSAVSYNLLINEWCKNGDIDKAILCLSQMNEENKKPTIISYTTLINGC 710
Query: 489 CLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
C A+ L +M+ KG N IT I
Sbjct: 711 CNSGRP-DDAKILWNEMQEKGCSPNRITYMAI 741
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 164/387 (42%), Gaps = 32/387 (8%)
Query: 97 YEIDGDKLENVLSLLQSSVDGYLESSLDSFE-LDLHEDFVLKVLETPLVLGENLVCFFKW 155
+ ++ K+E+ LLQ + ES D+ LD+H+ F K+L P N+V
Sbjct: 409 FLVNAGKVESTCYLLQLMMGN--ESRSDNIHILDIHQTFK-KLL--PNTASFNIV----- 458
Query: 156 VTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKA 215
+ LLK S + + +L++ + ++G + +L N LI K + K
Sbjct: 459 -----IHGLLKTT-SKLDQDAALSLFEDMVQLGCERDQLL----YNNLIDALCKSDRLKE 508
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
++++ TY L RR+ A + +M G P + ++
Sbjct: 509 SYKLLRDMEQSRLQPTHFTYNSIFGCLCRREDTVGAIELLREMRGHGHEPWIKHSTLLVK 568
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL-----ALDMLDDFS 330
CK G+A EA + P ++S D VK+ AL++ D
Sbjct: 569 QLCKNGRAIEASNFLADMVCEGFLPD------IVSYSAAMDGLVKINKLDRALELFQDIC 622
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
+ + + +I+ C+ V+ A L KM G P +N +I+ + K GD+
Sbjct: 623 TRGCRPDVVSHNILIKGYCKAGKVNEAYNFLHKMRVAGLVPSAVSYNLLINEWCKNGDID 682
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A+ L M KP + +YT L++G N G+ ++A + NE ++ + +TY ++
Sbjct: 683 KAILCLSQMNEENKKPTIISYTTLINGCCNSGRPDDAKILWNEMQEKGCSPNRITYMAIV 742
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPN 477
G CK + D AL + M++ ++P+
Sbjct: 743 HGLCKCGKPDEALVYYHSMEEKEMKPD 769
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 144/344 (41%), Gaps = 32/344 (9%)
Query: 191 EKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDW 250
E+G + + + L FSK G+ + ++ D + N +T+Y I + D
Sbjct: 256 ERGWVDGYVFSILALAFSKWGEVDRTMQFIDRMEDQNLMLNGKTFYALIHGFVKESREDM 315
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A + EKM++ G D +I CK ++A ++ + + P ++A L++
Sbjct: 316 ALKLLEKMLKLGFTLDVSIYDVLIGGLCKKRAFEKAMALFFKMKMLGITPDVQILAKLVA 375
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
S +E + L + D + E + F+SV++ L V LL M+
Sbjct: 376 SSPEERVVIMLLGERPKDINDEGMIFL---FNSVLKFLVNAGKVESTCYLLQLMMGNESR 432
Query: 371 -----------------PGNAVFNSVISAYSKAG---DMTPAMEMLKLMRSRGLKPDVYT 410
P A FN VI K D A+ + + M G + D
Sbjct: 433 SDNIHILDIHQTFKKLLPNTASFNIVIHGLLKTTSKLDQDAALSLFEDMVQLGCERDQLL 492
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV--TYHTLIRGYCKLEEFDCALKLLNE 468
Y L+ +++E+ ++L + ++ SRL P TY+++ C+ E+ A++LL E
Sbjct: 493 YNNLIDALCKSDRLKESYKLLRDMEQ--SRLQPTHFTYNSIFGCLCRREDTVGAIELLRE 550
Query: 469 MKDVGVQPNVDEYNKLIQSLCL--KALDWRTAEKLLEDMRLKGL 510
M+ G +P + L++ LC +A++ A L DM +G
Sbjct: 551 MRGHGHEPWIKHSTLLVKQLCKNGRAIE---ASNFLADMVCEGF 591
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 95/215 (44%), Gaps = 9/215 (4%)
Query: 278 CKG--GKAKEAHVVYTLAREKKMYPPQSV---VAFLISSLCQEDETVKLALDMLDDFSGE 332
C G G +EA+ ++ R + P + I S ++++ L + DF E
Sbjct: 166 CLGSVGLVEEANYLFDQVRSMDLCIPNNYSYNCLLEILSKTNSIDSIENRLMEMKDFGWE 225
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
KY + P V+ + C A + + M G G VF+ + A+SK G++
Sbjct: 226 VDKYTLTP---VLMAYCNAGKFDKALIVFNDMHERGWVDG-YVFSILALAFSKWGEVDRT 281
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
M+ + M + L + T+ L+ G+ + + A ++L + K L Y LI G
Sbjct: 282 MQFIDRMEDQNLMLNGKTFYALIHGFVKESREDMALKLLEKMLKLGFTLDVSIYDVLIGG 341
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
CK F+ A+ L +MK +G+ P+V KL+ S
Sbjct: 342 LCKKRAFEKAMALFFKMKMLGITPDVQILAKLVAS 376
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 143/373 (38%), Gaps = 72/373 (19%)
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH 287
C+ N +Y +E LS+ D + +M + G D + ++ +C GK +A
Sbjct: 189 CIPNNYSYNCLLEILSKTNSIDSIENRLMEMKDFGWEVDKYTLTPVLMAYCNAGKFDKAL 248
Query: 288 VVYTLAREKKMYPPQ--SVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVI 345
+V+ E+ S++A S + D T++ +D ++D + K F ++I
Sbjct: 249 IVFNDMHERGWVDGYVFSILALAFSKWGEVDRTMQF-IDRMED---QNLMLNGKTFYALI 304
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
+ A LL KM+ G ++++ +I K AM + M+ G+
Sbjct: 305 HGFVKESREDMALKLLEKMLKLGFTLDVSIYDVLIGGLCKKRAFEKAMALFFKMKMLGIT 364
Query: 406 PDV---------------------------------YTYTGLMSGYANGGQMEEACEILN 432
PDV + + ++ N G++E C +L
Sbjct: 365 PDVQILAKLVASSPEERVVIMLLGERPKDINDEGMIFLFNSVLKFLVNAGKVESTCYLLQ 424
Query: 433 EAKKNHSR---------------LSP------VTYHTLIRGYCKLEEFDCALKLLNEMKD 471
N SR L P + H L++ KL++ D AL L +M
Sbjct: 425 LMMGNESRSDNIHILDIHQTFKKLLPNTASFNIVIHGLLKTTSKLDQ-DAALSLFEDMVQ 483
Query: 472 VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM---RLKGLHL--NGITRALIRAVKEL 526
+G + + YN LI +LC K+ + + KLL DM RL+ H N I L R
Sbjct: 484 LGCERDQLLYNNLIDALC-KSDRLKESYKLLRDMEQSRLQPTHFTYNSIFGCLCR----- 537
Query: 527 EEDAIENGEALVE 539
ED + E L E
Sbjct: 538 REDTVGAIELLRE 550
>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 172/398 (43%), Gaps = 43/398 (10%)
Query: 179 ALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFT 238
+L+D +KE G T +I ++ ++ KLG+ + A + + + GC TY
Sbjct: 251 SLFDEMKENGLHP----TAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTEL 306
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK---------------- 282
I+ + + + A+S+ M++ G PD + +I+ K G+
Sbjct: 307 IKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQC 366
Query: 283 --------------------AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
A EA + Y +E + P + LI C+ + K A
Sbjct: 367 TPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEK-A 425
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
L +L++ + + S+I +L + K A L ++ V+ +I
Sbjct: 426 LLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKH 485
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
K G ++ A+++ M+ G PDVY Y LMSG G +EA +L ++N
Sbjct: 486 LGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPD 545
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
+++ ++ G+ + A+++ MK+ ++P+V YN ++ L +A + A KL+
Sbjct: 546 LNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLS-RAGMFEEAAKLM 604
Query: 503 EDMRLKGLHLNGIT-RALIRAVKELEEDAIENGEALVE 539
++M KG + IT +++ AV +++ED G+ ++
Sbjct: 605 KEMNSKGFEYDLITYSSILEAVGKIDEDHTPAGQTVMH 642
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 133/313 (42%), Gaps = 39/313 (12%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYG-CVANQETYYFTIEALSRRKIFDWAWSV 254
T N +I + + G + E++N+ + G C+ + TY I A + D A S+
Sbjct: 193 TSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISL 252
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
++M E G P ++ I+ + K G+
Sbjct: 253 FDEMKENGLHPTAKIYTTILGIYFKLGR-------------------------------- 280
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
V+ AL ++ + + + ++ +I+ + + V A ++ M+ EG P
Sbjct: 281 ----VEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVV 336
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG-YANGGQMEEACEILNE 433
+ N++I+ KAG + A+++ + M S P+V TY ++ + + + EA +
Sbjct: 337 LINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEK 396
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
K+N S TY LI G+CK + AL LL EM + G P Y LI +L KA
Sbjct: 397 MKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALG-KAK 455
Query: 494 DWRTAEKLLEDMR 506
+ A +L +++R
Sbjct: 456 RYEAANELFQELR 468
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 111/256 (43%), Gaps = 2/256 (0%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
TY I L + W ++M+ + + + +I+ K +A ++
Sbjct: 126 TYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQI 185
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA-IKPFSSVIRSLCRMK 352
+ +K P + +I L QE K+ ++ ++ E +S++I + ++
Sbjct: 186 KGRKCKPTSNTYNSMILMLMQEGHHEKVH-ELYNEMCNEGDCLPDTVTYSALIAAFGKLG 244
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT 412
A +L +M G P ++ +++ Y K G + A+ +++ M+ +G VYTYT
Sbjct: 245 RDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYT 304
Query: 413 GLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
L+ G G++EEA I K + V + LI K A+KL EM+ +
Sbjct: 305 ELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESL 364
Query: 473 GVQPNVDEYNKLIQSL 488
PNV YN +I++L
Sbjct: 365 QCTPNVVTYNTVIKAL 380
>gi|255579531|ref|XP_002530608.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529856|gb|EEF31788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 596
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 128/254 (50%), Gaps = 3/254 (1%)
Query: 233 ETYYFTIEALSRRKIFDWAWSVCEKMIETGS-LPDSEKVGKIISWFCKGGKAKEAHVVYT 291
E Y ++ S+ + F W++ E+M + S L SE +I F ++A V
Sbjct: 141 ENYKAMVKIFSKMRQFGAVWALLEEMRKDNSVLITSELFIVLIRRFASARLVEKAIEVLD 200
Query: 292 LAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRM 351
+ P + V L+ +LC+ + +VK A + +D +++ F+S++ CR
Sbjct: 201 EMPKYGCEPDEYVFGCLLDALCK-NGSVKQAASLFEDMRVRFSP-SLRHFTSLLYGWCRE 258
Query: 352 KDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTY 411
+ AK +L +M G P VFN+++SAYS AG MT A ++LK M +G +P+ +Y
Sbjct: 259 GKLIEAKHVLVQMREAGFEPDIVVFNNLLSAYSMAGKMTDAFDLLKEMVRKGCEPNANSY 318
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
T ++ + + +M+EA + E ++ VTY LI G+CK + + ++L+ MK
Sbjct: 319 TIMIQAFCSQEKMDEAMRVFVEMERTGCEADVVTYTALISGFCKWGKINRGYQILDAMKQ 378
Query: 472 VGVQPNVDEYNKLI 485
G PN Y +++
Sbjct: 379 KGHMPNQLTYLRIL 392
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 123/313 (39%), Gaps = 40/313 (12%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+ + N L++ +S GK AF++ + GC N +Y I+A ++ D A V
Sbjct: 280 IVVFNNLLSAYSMAGKMTDAFDLLKEMVRKGCEPNANSYTIMIQAFCSQEKMDEAMRVFV 339
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQ-SVVAFLISSLCQE 315
+M TG D +IS FCK GK + + ++K P Q + + L++ +E
Sbjct: 340 EMERTGCEADVVTYTALISGFCKWGKINRGYQILDAMKQKGHMPNQLTYLRILLAHEKKE 399
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ L L G +I ++ VIR C++ +V + ++M + P
Sbjct: 400 ELEECLELIESMRMVGCVPDLSI--YNVVIRLACKLGEVKQGVQIWNEMEASDFSPELDT 457
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGL------------------------KPDVYT- 410
F +I + G + A E K M RGL DV++
Sbjct: 458 FVIMIHGFLGQGCLVEACEYFKEMIGRGLLTTPQYGILKELLNALLRGEKLGMAKDVWSC 517
Query: 411 ------------YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
+T + + G ++EAC + + P T+ L+RG KL
Sbjct: 518 IVTKGCELNADAWTIWIHSLFSNGHVKEACSYCLDMMEADIMPKPETFAKLMRGLRKLYN 577
Query: 459 FDCALKLLNEMKD 471
+ A ++ ++KD
Sbjct: 578 REFAAEITEKIKD 590
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 157/350 (44%), Gaps = 16/350 (4%)
Query: 191 EKGVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
E+G+ + N L+ F K+G+ A +F + G + TY ++AL
Sbjct: 163 ERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVG 222
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A + KM G PDS +++ K G+ +EAH V+ ++ + L+
Sbjct: 223 AARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLL 282
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMI 365
++L + +D + E + P F++++ +L + A+ + ++M+
Sbjct: 283 ATLAKAGN-----MDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMV 337
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
G P +N +I +Y++ GD A +ML+ M G P+ TY L+ A GQ++
Sbjct: 338 ESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVD 397
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
EA +L E + R VTY+ L+ K E A +L +MKD GV+P+ Y I
Sbjct: 398 EAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRI 457
Query: 486 QSLCLKALDWRTAEKLL--EDMRLKGLHLN-GITRALIRAVKELEEDAIE 532
L A D R E L+ +DM+ G ++ + R LIRA + +E
Sbjct: 458 DGL---AFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELE 504
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 140/314 (44%), Gaps = 10/314 (3%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
TV +LI + G+ + A V+ K GC ++ Y I R D A +
Sbjct: 64 TVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMF 123
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+M GS PD G +++ K G+ +EA + E+ + P L+ + +
Sbjct: 124 REMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKV 183
Query: 316 DETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
+ LDM E ++ +P ++ ++ +LC V A+ L KM +G P
Sbjct: 184 GQ-----LDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSP 238
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
+ ++++++ K+G + A ++ + M RG+ D+ Y L++ A G M+ +++
Sbjct: 239 DSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLM 298
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
E + +++T++ K + D A ++ M + G +P++ YN LI S +
Sbjct: 299 KEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYA-R 357
Query: 492 ALDWRTAEKLLEDM 505
D A ++LE+M
Sbjct: 358 FGDAAQARQMLEEM 371
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 140/332 (42%), Gaps = 45/332 (13%)
Query: 201 NELIALFSKLGKGKA---AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
N L+ L + G+G AF++FN+ + C + I+ L F+ A V +K
Sbjct: 31 NTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKK 90
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
+++ G D +I +F + G+ A ++ + K P + FL+++L
Sbjct: 91 LVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNAL----- 145
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
G+A + V A++ M+ G P +N
Sbjct: 146 -------------GKAGR------------------VQEARSFFDAMLERGLTPNIPTYN 174
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
++ A+ K G + A+ + M+ RG +P V TY L+ + G++ A ++ ++ +
Sbjct: 175 LLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGD 234
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
TY TL+ G K + A K+ EM D GV ++ YN L+ +L KA +
Sbjct: 235 GCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLA-KAGNMDR 293
Query: 498 AEKLLEDMRLKGLH-----LNGITRALIRAVK 524
KL+++M KG H N I AL +A K
Sbjct: 294 VWKLMKEMSRKGFHPDAFSFNTIMDALGKANK 325
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 117/269 (43%), Gaps = 6/269 (2%)
Query: 247 IFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVA 306
I D ++ ++M+ G + K+I+ + +G K+ +A ++ A P
Sbjct: 10 ILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFT 69
Query: 307 FLISSLCQ--EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM 364
LI L E E +L L + ++A ++ +IR R + A + +M
Sbjct: 70 KLIDILVNSGEFERAELVYKKLVQKGCQLDRFA---YNVLIRYFGRSGQLDSAMEMFREM 126
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
+G P + +++A KAG + A M RGL P++ TY LM + GQ+
Sbjct: 127 KIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQL 186
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
+ A + E K+ + S VTY+ L+ C A KL ++M G P+ Y+ L
Sbjct: 187 DMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTL 246
Query: 485 IQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
+ L K+ A K+ +M +G+ ++
Sbjct: 247 VNGLG-KSGRVEEAHKVFREMVDRGVAVD 274
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.132 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,330,022,096
Number of Sequences: 23463169
Number of extensions: 344729083
Number of successful extensions: 1089971
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6600
Number of HSP's successfully gapped in prelim test: 3813
Number of HSP's that attempted gapping in prelim test: 973705
Number of HSP's gapped (non-prelim): 59154
length of query: 540
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 392
effective length of database: 8,886,646,355
effective search space: 3483565371160
effective search space used: 3483565371160
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 79 (35.0 bits)