BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042609
(540 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0C896|PP209_ARATH Pentatricopeptide repeat-containing protein At3g02650,
mitochondrial OS=Arabidopsis thaliana GN=At3g02650 PE=2
SV=1
Length = 576
Score = 550 bits (1416), Expect = e-155, Method: Compositional matrix adjust.
Identities = 299/577 (51%), Positives = 379/577 (65%), Gaps = 38/577 (6%)
Query: 1 MWRSIAAGSRLVARNFGVA------TEKVHCSQTLSLNISRSLSKPSLYRSSRFLS---- 50
M RS S+ +RN V T+ H +LS S + R+ RF S
Sbjct: 1 MLRSFLCRSQNASRNLAVTRISKKKTQTTHSLTSLSRFSYLESSGNASVRNIRFFSTSPP 60
Query: 51 --ESPAANPKDESSFSPETDFS-------------SRSFGENEYAQMDPSADA-VESKEE 94
E+P + P DE S + + S +G + D+ + + E
Sbjct: 61 TEENPVSLPADEIPISSAAELTLEESVASALGFSESGDYGGTSVEAVGEDGDSEIVAIEN 120
Query: 95 EAYEIDGDKLENVLSLLQSSVDGYLESSLDSFELDLHEDFVLKVLETPLVLGENLVCFFK 154
E Y+ D +KLE+VLSLL+S + LE L++ +DLH DFV++V E+P + G+NL+ F K
Sbjct: 121 EVYQFDDEKLESVLSLLRSDEES-LEFGLNALNVDLHLDFVVRVFESPGISGKNLIRFLK 179
Query: 155 W--------VTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEK-GVLTVEILNELIA 205
W VT+ +V++LL AI S + + Y LWD+VKEIGEKE GVL +EILNELIA
Sbjct: 180 WATQNEEITVTTSLVESLLVAIASDTRRMDAYGLWDLVKEIGEKESCGVLNLEILNELIA 239
Query: 206 LFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLP 265
LF KLGK KAAF+VF+K ++G N +TYY T+EAL +R DWA SVCEKM+++G L
Sbjct: 240 LFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLS 299
Query: 266 DSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDM 325
+ E++G II+WFCK GKA+EA+ VY LA+ K+ P VA LI++LC+ D T+ A +M
Sbjct: 300 EGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTITFAQEM 359
Query: 326 LDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSK 385
L D SGEAR+ IKPFS VI SLCRM++V AK LL MIS+GP PGNAVFN V+ A SK
Sbjct: 360 LGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSK 419
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
GD+ A E+LKLM SRGLKPDVYTYT ++SGYA GG M+EA EIL EAKK H +LSPVT
Sbjct: 420 TGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVT 479
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
YH LIRGYCK+EE+D ALKLLNEM GVQPN DEYNKLIQS CLKALDW AE L E+M
Sbjct: 480 YHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEM 539
Query: 506 RLKGLHLNGITRALIRAVKELEEDA--IENGEALVEA 540
+ KGLHLN I++ LIRAVKE+E +A E+G L EA
Sbjct: 540 KQKGLHLNAISQGLIRAVKEMESEAKVTEDGNLLAEA 576
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 135 bits (340), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 153/321 (47%), Gaps = 3/321 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V N LI + + + A + YG V +++T+ ++ D A + E
Sbjct: 189 VSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIRE 248
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEA-HVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+M+E G + V I+ FCK G+ ++A + + ++ + +P Q L++ LC+
Sbjct: 249 QMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKA 308
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
VK A++++D E + ++SVI LC++ +V A +L +MI+ P
Sbjct: 309 GH-VKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVT 367
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N++IS K + A E+ +++ S+G+ PDV T+ L+ G A E+ E +
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
TY+ LI C + D AL +L +M+ G +V YN LI C KA
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFC-KANKT 486
Query: 496 RTAEKLLEDMRLKGLHLNGIT 516
R AE++ ++M + G+ N +T
Sbjct: 487 REAEEIFDEMEVHGVSRNSVT 507
Score = 118 bits (296), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 146/329 (44%), Gaps = 9/329 (2%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+ +C + K + D++ + G V N +I+ KLG+ K A EV +
Sbjct: 299 NTLVNGLCKAGHVKHAIEIMDVMLQEGYDPD----VYTYNSVISGLCKLGEVKEAVEVLD 354
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ C N TY I L + + A + + G LPD +I C
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLD--DFSGEARKYAIK 339
+ A ++ R K P + LI SLC + + + AL+ML + SG AR ++
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGK-LDEALNMLKQMELSGCAR--SVI 471
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
++++I C+ A+ + +M G + +N++I K+ + A +++ M
Sbjct: 472 TYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
G KPD YTY L++ + GG +++A +I+ N VTY TLI G CK
Sbjct: 532 IMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRV 591
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ A KLL ++ G+ YN +IQ L
Sbjct: 592 EVASKLLRSIQMKGINLTPHAYNPVIQGL 620
Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 148/318 (46%), Gaps = 3/318 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDY-GCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+N ++ F K G+ + A + + G +Q T+ + L + A + + M
Sbjct: 262 VNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVM 321
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
++ G PD +IS CK G+ KEA V + P LIS+LC+E++
Sbjct: 322 LQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ- 380
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
V+ A ++ + + + F+S+I+ LC ++ A L +M S+G P +N
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I + G + A+ MLK M G V TY L+ G+ + EA EI +E + +
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTA 498
+ VTY+TLI G CK + A +L+++M G +P+ YN L+ C + D + A
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFC-RGGDIKKA 559
Query: 499 EKLLEDMRLKGLHLNGIT 516
+++ M G + +T
Sbjct: 560 ADIVQAMTSNGCEPDIVT 577
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 16/215 (7%)
Query: 303 SVVAFLISSLCQ---EDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVH 355
S LI S Q +DE + + M+D+F +KP ++ ++ L +
Sbjct: 119 STFLILIESYAQFELQDEILSVVDWMIDEF-------GLKPDTHFYNRMLNLLVDGNSLK 171
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
+ +KM G P + FN +I A +A + PA+ ML+ M S GL PD T+T +M
Sbjct: 172 LVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVM 231
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV-GV 474
GY G ++ A I + + S V+ + ++ G+CK + AL + EM + G
Sbjct: 232 QGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGF 291
Query: 475 QPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
P+ +N L+ LC KA + A ++++ M +G
Sbjct: 292 FPDQYTFNTLVNGLC-KAGHVKHAIEIMDVMLQEG 325
Score = 35.0 bits (79), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 20/160 (12%)
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
L SK + P P A++ ++ ++G ++L+ M+S + T+ L+ YA
Sbjct: 72 LASKKPNFSPEP--ALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYA 129
Query: 420 NGGQMEEACEILN--EAKKNHSRLSPVTY------HTLIRGYC-KLEEFDCALKLLNEMK 470
Q E EIL+ + + L P T+ + L+ G KL E A +M
Sbjct: 130 ---QFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHA-----KMS 181
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
G++P+V +N LI++LC +A R A +LEDM GL
Sbjct: 182 VWGIKPDVSTFNVLIKALC-RAHQLRPAILMLEDMPSYGL 220
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 161/344 (46%), Gaps = 17/344 (4%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
F + + +A + +GCV N Y I +LS+ + A + E+M G +PD
Sbjct: 227 FCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPD 286
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
+E +I CK + EA + + P +L++ LC+ +D
Sbjct: 287 AETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGR-----VDAA 341
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI-SEGPPPGNAVFNSVISAYSK 385
D K I F+++I + AK +LS M+ S G P +NS+I Y K
Sbjct: 342 KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK 401
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
G + A+E+L MR++G KP+VY+YT L+ G+ G+++EA +LNE + + + V
Sbjct: 402 EGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVG 461
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
++ LI +CK A+++ EM G +P+V +N LI LC + + + A LL DM
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC-EVDEIKHALWLLRDM 520
Query: 506 RLKGLHLNGIT----------RALIRAVKELEEDAIENGEALVE 539
+G+ N +T R I+ ++L + + G L E
Sbjct: 521 ISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDE 564
Score = 115 bits (289), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 167/374 (44%), Gaps = 20/374 (5%)
Query: 117 GYLESSLDSF-ELDLHEDFVLKVLETPLVLGENLVCFFKWVTSGVVDALLKAICSSVGKK 175
GYL + L +D +D ++ + +V+ L+ F VT G +D KA+ S
Sbjct: 326 GYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGF--VTHGRLDDA-KAVLS----- 377
Query: 176 EVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETY 235
D+V G V V N LI + K G A EV + + GC N +Y
Sbjct: 378 ------DMVTSYGI----VPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSY 427
Query: 236 YFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE 295
++ + D A++V +M G P++ +IS FCK + EA ++
Sbjct: 428 TILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPR 487
Query: 296 KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVH 355
K P LIS LC+ DE +K AL +L D E ++++I + R ++
Sbjct: 488 KGCKPDVYTFNSLISGLCEVDE-IKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIK 546
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
A+ L+++M+ +G P +NS+I +AG++ A + + M G P + L+
Sbjct: 547 EARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILI 606
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
+G G +EEA E E S VT+++LI G C+ + L + +++ G+
Sbjct: 607 NGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIP 666
Query: 476 PNVDEYNKLIQSLC 489
P+ +N L+ LC
Sbjct: 667 PDTVTFNTLMSWLC 680
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 189/419 (45%), Gaps = 49/419 (11%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA 216
T GVV +KA C+ E+ + +++++ K V I LI SK + A
Sbjct: 219 TFGVV---MKAFCAV---NEIDSALSLLRDM-TKHGCVPNSVIYQTLIHSLSKCNRVNEA 271
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
++ + GCV + ET+ I L + + A + +M+ G PD G +++
Sbjct: 272 LQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNG 331
Query: 277 FCKGGKAKEAH----------------VVYTLAREKKMYPPQSVVAFLISS------LCQ 314
CK G+ A +++ ++ ++V++ +++S +C
Sbjct: 332 LCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCT 391
Query: 315 ---------EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI 365
++ V LAL++L D + K + ++ ++ C++ + A +L++M
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS 451
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
++G P FN +ISA+ K + A+E+ + M +G KPDVYT+ L+SG +++
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 511
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
A +L + + VTY+TLI + + E A KL+NEM G + YN LI
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571
Query: 486 QSLCLKALDWRTAEKLLEDMRLKG---------LHLNGITRA-LIRAVKELEEDAIENG 534
+ LC +A + A L E M G + +NG+ R+ ++ E +++ + G
Sbjct: 572 KGLC-RAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG 629
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 14/222 (6%)
Query: 285 EAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSV 344
E VY+ K Y V+ L+S C K+A ++ D + F V
Sbjct: 171 EMRNVYSCEPTFKSY--NVVLEILVSGNCH-----KVAANVFYDMLSRKIPPTLFTFGVV 223
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
+++ C + ++ A +LL M G P + ++ ++I + SK + A+++L+ M G
Sbjct: 224 MKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGC 283
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
PD T+ ++ G ++ EA +++N +TY L+ G CK+ D A
Sbjct: 284 VPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKD 343
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLCLKA-LDWRTAEKLLEDM 505
L + +P + +N LI LD A+ +L DM
Sbjct: 344 LFYRIP----KPEIVIFNTLIHGFVTHGRLD--DAKAVLSDM 379
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 68/151 (45%), Gaps = 2/151 (1%)
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS-RGLKPDVYTYTGLMSGY 418
LL +M EG ++F S++ Y KAG ++ MR+ +P +Y ++
Sbjct: 133 LLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEIL 192
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
+G + A + + + T+ +++ +C + E D AL LL +M G PN
Sbjct: 193 VSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNS 252
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
Y LI SL K A +LLE+M L G
Sbjct: 253 VIYQTLIHSLS-KCNRVNEALQLLEEMFLMG 282
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 179/398 (44%), Gaps = 50/398 (12%)
Query: 176 EVYALWDIVK---EIGEKEKGV-----LT-------VEILNELIALFSKLGKGKAAFEVF 220
+VY+ ++K E GE EK LT V I LI K G+ + A ++F
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ G G VAN+ TY I L + + + + EKM E G P+ +++ CK
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDM------------ 325
G+ K+A V+ RE+ + LI LC+E +E K+ M
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 326 ---LDDFSG------------EARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMIS 366
+D F G + + + P ++ ++ CR D GA ++ +M
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
G P + +I ++++ +M A+++ M GL PDV+TY+ L+ G+ GQM E
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A + + + + V Y+T+I GYCK ALKLL EM++ + PNV Y +I+
Sbjct: 462 ASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIE 521
Query: 487 SLCLKALDWRTAEKLLEDMRLKGLHLNGITRALIRAVK 524
LC K + AE+L+E M G+ + +LI K
Sbjct: 522 VLC-KERKSKEAERLVEKMIDSGIDPSTSILSLISRAK 558
Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 177/387 (45%), Gaps = 18/387 (4%)
Query: 119 LESSLDSFELDLHEDFVLKVLETPLVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVY 178
+ S + S L+L + ++++ V G N CF + LL + VG
Sbjct: 101 INSYVQSQSLNLSISYFNEMVDNGFVPGSN--CF---------NYLLTFV---VGSSSFN 146
Query: 179 ALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFT 238
W E K K VL V LI + G+ + +F++ + ++G N Y
Sbjct: 147 QWWSFFNE--NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTL 204
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
I+ ++ + A + +M + G + + +I+ K G K+ +Y +E +
Sbjct: 205 IDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGV 264
Query: 299 YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
+P +++ LC++ T K A + D+ I ++++I LCR ++ A
Sbjct: 265 FPNLYTYNCVMNQLCKDGRT-KDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEAN 323
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
++ +M S+G P +N++I + G + A+ + + ++SRGL P + TY L+SG+
Sbjct: 324 KVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGF 383
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G A +++ E ++ + S VTY LI + + + + A++L M+++G+ P+V
Sbjct: 384 CRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDV 443
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDM 505
Y+ LI C+K A +L + M
Sbjct: 444 HTYSVLIHGFCIKG-QMNEASRLFKSM 469
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 4/183 (2%)
Query: 332 EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
E K + + +I S + + ++ + + ++M+ G PG+ FN +++ +
Sbjct: 88 ETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQ 147
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
+S+ + DVY++ L+ G G++E++ ++L E + + V Y TLI
Sbjct: 148 WWSFFNENKSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLID 206
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC---LKALDWRTAEKLLEDMRLK 508
G CK E + A L EM +G+ N Y LI L +K + EK+ ED
Sbjct: 207 GCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFP 266
Query: 509 GLH 511
L+
Sbjct: 267 NLY 269
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 157/328 (47%), Gaps = 11/328 (3%)
Query: 194 VLTVEILNELIALFSK-LGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAW 252
VL+V+ N + SK K A VF +F + G N +Y I + + A
Sbjct: 207 VLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAH 266
Query: 253 SVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSL 312
+ M G PD +++ +C+ G+ + + + + K + P + +I L
Sbjct: 267 HLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLL 326
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEG 368
C+ KLA + + FS R+ I P ++++I C+ D+ A +M S
Sbjct: 327 CR---ICKLA-EAEEAFSEMIRQ-GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD 381
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
P + ++IS + + GDM A ++ M +GL+PD T+T L++GY G M++A
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ N + + VTY TLI G CK + D A +LL+EM +G+QPN+ YN ++ L
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 501
Query: 489 CLKALDWRTAEKLLEDMRLKGLHLNGIT 516
C K+ + A KL+ + GL+ + +T
Sbjct: 502 C-KSGNIEEAVKLVGEFEAAGLNADTVT 528
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 121/260 (46%), Gaps = 2/260 (0%)
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+MI G LPD+ +I FCK G + A + + + P +IS CQ
Sbjct: 341 EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ V+ + F ++ F+ +I C+ + A + + MI G P +
Sbjct: 401 DMVEAGKLFHEMFCKGLEPDSV-TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
++I K GD+ A E+L M GL+P+++TY +++G G +EEA +++ E +
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
VTY TL+ YCK E D A ++L EM G+QP + +N L+ CL +
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM-LE 578
Query: 497 TAEKLLEDMRLKGLHLNGIT 516
EKLL M KG+ N T
Sbjct: 579 DGEKLLNWMLAKGIAPNATT 598
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 155/341 (45%), Gaps = 6/341 (1%)
Query: 176 EVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETY 235
+V+ L +++K G K I +I L ++ K A E F++ G + + Y
Sbjct: 299 KVWKLIEVMKRKGLKPNSY----IYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVY 354
Query: 236 YFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE 295
I+ +R A +M PD IIS FC+ G EA ++
Sbjct: 355 TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 414
Query: 296 KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVH 355
K + P LI+ C+ +K A + + + ++++I LC+ D+
Sbjct: 415 KGLEPDSVTFTELINGYCKAGH-MKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
A LL +M G P +NS+++ K+G++ A++++ + GL D TYT LM
Sbjct: 474 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 533
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
Y G+M++A EIL E + + VT++ L+ G+C + KLLN M G+
Sbjct: 534 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 593
Query: 476 PNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
PN +N L++ C++ + + A + +DM +G+ +G T
Sbjct: 594 PNATTFNSLVKQYCIRN-NLKAATAIYKDMCSRGVGPDGKT 633
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 169/367 (46%), Gaps = 19/367 (5%)
Query: 159 GVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLT-VEILNELIALFSKLGKGKAAF 217
G + LL IC +E ++ +++++ G+L + LI F K G +AA
Sbjct: 320 GSIIGLLCRICKLAEAEEAFS--EMIRQ------GILPDTVVYTTLIDGFCKRGDIRAAS 371
Query: 218 EVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWF 277
+ F + + TY I + A + +M G PDS ++I+ +
Sbjct: 372 KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGY 431
Query: 278 CKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYA 337
CK G K+A V+ + P LI LC+E + LD ++ E K
Sbjct: 432 CKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD-----LDSANELLHEMWKIG 486
Query: 338 IKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
++P ++S++ LC+ ++ A L+ + + G + +++ AY K+G+M A
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
E+LK M +GL+P + T+ LM+G+ G +E+ ++LN + T+++L++ Y
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
C A + +M GV P+ Y L++ C KA + + A L ++M+ KG ++
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC-KARNMKEAWFLFQEMKGKGFSVS 665
Query: 514 GITRALI 520
T +++
Sbjct: 666 VSTYSVL 672
Score = 105 bits (262), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 125/275 (45%), Gaps = 1/275 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
ELI + K G K AF V N GC N TY I+ L + D A + +M
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G P+ I++ CK G +EA + + L+ + C+ E
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
K A ++L + G+ + I F+ ++ C + + LL+ M+++G P FNS+
Sbjct: 544 K-AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+ Y ++ A + K M SRG+ PD TY L+ G+ M+EA + E K
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV 474
+S TY LI+G+ K ++F A ++ ++M+ G+
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 173/372 (46%), Gaps = 22/372 (5%)
Query: 158 SGVVDALLKAICSSVGKKEVYALWDIVKEIGEKE--KGVLTVEILNELIALFSKLGKGKA 215
+ V+DA +++ K+ + ++ KE+ E + V T IL I F G
Sbjct: 173 NAVLDATIRS------KRNISFAENVFKEMLESQVSPNVFTYNIL---IRGFCFAGNIDV 223
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A +F+K GC+ N TY I+ + + D + + M G P+ +I+
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
C+ G+ KE V T + + LI C+E AL M +
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEG-NFHQALVMHAEMLRHGLT 342
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
++ ++S+I S+C+ +++ A L +M G P + +++ +S+ G M A +
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRV 402
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGY 453
L+ M G P V TY L++G+ G+ME+A +L + K+ LSP V+Y T++ G+
Sbjct: 403 LREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE--KGLSPDVVSYSTVLSGF 460
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE--KLLEDMRLKGLH 511
C+ + D AL++ EM + G++P+ Y+ LIQ C + RT E L E+M GL
Sbjct: 461 CRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQ---RRTKEACDLYEEMLRVGLP 517
Query: 512 LNGIT-RALIRA 522
+ T ALI A
Sbjct: 518 PDEFTYTALINA 529
Score = 95.9 bits (237), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 137/306 (44%), Gaps = 10/306 (3%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I + G+ K V + G ++ TY I+ + F A + +M+
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR 338
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DE 317
G P +I CK G A R + + P + L+ Q+ +E
Sbjct: 339 HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNE 398
Query: 318 TVKLALDMLDD-FSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
++ +M D+ FS ++ ++++I C + A +L M +G P +
Sbjct: 399 AYRVLREMNDNGFSP-----SVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSY 453
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
++V+S + ++ D+ A+ + + M +G+KPD TY+ L+ G+ + +EAC++ E +
Sbjct: 454 STVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLR 513
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
TY LI YC + + AL+L NEM + GV P+V Y+ LI L K R
Sbjct: 514 VGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLN-KQSRTR 572
Query: 497 TAEKLL 502
A++LL
Sbjct: 573 EAKRLL 578
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 153/398 (38%), Gaps = 91/398 (22%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI K G A E ++ G N+ TY ++ S++ + A+ V +M + G
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETV 319
P +I+ C GK ++A V +EK + P + ++S C+ DE +
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 320 KLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
++ +M++ IKP +SS+I+ C + A L +M+ G PP
Sbjct: 471 RVKREMVEK--------GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFT 522
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+ ++I+AY GD+ A+++ M +G+ PDV TY+ L++G + EA +L +
Sbjct: 523 YTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLF 582
Query: 436 KNHSRLSPVTYHTLI--------------------------------------------- 450
S S VTYHTLI
Sbjct: 583 YEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTA 642
Query: 451 -----RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
G+C+ + A L EM G L+ ++ + AL
Sbjct: 643 YNIMIHGHCRAGDIRKAYTLYKEMVKSGF---------LLHTVTVIAL------------ 681
Query: 506 RLKGLH----LNGITRALIRAVKELEEDAIENGEALVE 539
+K LH +N + ++ ++ E E + LVE
Sbjct: 682 -VKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVE 718
Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 152/376 (40%), Gaps = 53/376 (14%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI + K G A + + +G + TY I ++ + + A ++M
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 373
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ ++ F + G EA+ V + P LI+ C + ++
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK-ME 432
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A+ +L+D + + +S+V+ CR DV A + +M+ +G P ++S+I
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA------ 434
+ + A ++ + M GL PD +TYT L++ Y G +E+A ++ NE
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
Query: 435 --------------KKNHSR---------------LSPVTYHT---------------LI 450
K++ +R S VTYHT LI
Sbjct: 553 PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLI 612
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+G+C A ++ M +P+ YN +I C +A D R A L ++M G
Sbjct: 613 KGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHC-RAGDIRKAYTLYKEMVKSGF 671
Query: 511 HLNGITR-ALIRAVKE 525
L+ +T AL++A+ +
Sbjct: 672 LLHTVTVIALVKALHK 687
Score = 82.8 bits (203), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 93/177 (52%), Gaps = 2/177 (1%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG-DMTPAMEMLKLM 399
F V++S R+ + A +++ + G PG +N+V+ A ++ +++ A + K M
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
+ P+V+TY L+ G+ G ++ A + ++ + + VTY+TLI GYCKL +
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
D KLL M G++PN+ YN +I LC + + +L +M +G L+ +T
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREG-RMKEVSFVLTEMNRRGYSLDEVT 312
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 77/150 (51%), Gaps = 4/150 (2%)
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ-MEEACEIL 431
++VF+ V+ +YS+ + A+ ++ L ++ G P V +Y ++ + + A +
Sbjct: 134 SSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVF 193
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC-L 490
E ++ + TY+ LIRG+C D AL L ++M+ G PNV YN LI C L
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253
Query: 491 KALDWRTAEKLLEDMRLKGLHLNGITRALI 520
+ +D KLL M LKGL N I+ ++
Sbjct: 254 RKID--DGFKLLRSMALKGLEPNLISYNVV 281
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 16/275 (5%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
+V N LI GK + A V + G + +Y + R D A V
Sbjct: 414 SVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVK 473
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+M+E G PD+ +I FC+ + KEA +Y + P + LI++ C E
Sbjct: 474 REMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCME 533
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ K AL + ++ + + +S +I L + AK LL K+ E P +
Sbjct: 534 GDLEK-ALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVT 592
Query: 376 FN---------------SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
++ S+I + G MT A ++ + M + KPD Y ++ G+
Sbjct: 593 YHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCR 652
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
G + +A + E K+ L VT L++ K
Sbjct: 653 AGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHK 687
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 128/252 (50%), Gaps = 1/252 (0%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
+E L +R + A ++ +++++ G P+ +I CKG K EA +++ + +
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL 398
Query: 299 YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
P + LI C+ + + AL L + K ++ P++S+I C+ D+ A+
Sbjct: 399 RPNDVTYSILIDMFCRRGK-LDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAE 457
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+++MI++ P + S++ Y G + A+ + M +G+ P +YT+T L+SG
Sbjct: 458 GFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL 517
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G + +A ++ NE + + + + VTY+ +I GYC+ + A + L EM + G+ P+
Sbjct: 518 FRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDT 577
Query: 479 DEYNKLIQSLCL 490
Y LI LCL
Sbjct: 578 YSYRPLIHGLCL 589
Score = 119 bits (297), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 139/309 (44%), Gaps = 5/309 (1%)
Query: 205 ALFSKLGKGKAAFE---VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET 261
AL L KG+ E +F++ G G N TY I+ RR D A S +M++T
Sbjct: 372 ALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDT 431
Query: 262 GSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKL 321
G +I+ CK G A KK+ P L+ C + + K
Sbjct: 432 GLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK- 490
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
AL + + +G+ +I F++++ L R + A L ++M P +N +I
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE 550
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
Y + GDM+ A E LK M +G+ PD Y+Y L+ G GQ EA ++ K + L
Sbjct: 551 GYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCEL 610
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+ + Y L+ G+C+ + + AL + EM GV ++ Y LI LK D + L
Sbjct: 611 NEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG-SLKHKDRKLFFGL 669
Query: 502 LEDMRLKGL 510
L++M +GL
Sbjct: 670 LKEMHDRGL 678
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 129/287 (44%), Gaps = 20/287 (6%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
+ L + + F A + M+ G PD +I C+ + L+R K+M
Sbjct: 199 LHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCE---------LKDLSRAKEM 249
Query: 299 YPPQ-------SVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLC 349
++V + LI LC++ + V A+ + D +G+ K + + +++ LC
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKK-QKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLC 308
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
++++ ++ +M+ P A +S++ K G + A+ ++K + G+ P+++
Sbjct: 309 KVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLF 368
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
Y L+ G + EA + + K R + VTY LI +C+ + D AL L EM
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Query: 470 KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
D G++ +V YN LI C K D AE + +M K L +T
Sbjct: 429 VDTGLKLSVYPYNSLINGHC-KFGDISAAEGFMAEMINKKLEPTVVT 474
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 99/200 (49%), Gaps = 1/200 (0%)
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
LA+++ +D + + ++ VIRSLC +KD+ AK +++ M + G +N +I
Sbjct: 210 LAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLI 269
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
K + A+ + K + + LKPDV TY L+ G + E E+++E
Sbjct: 270 DGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFS 329
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
S +L+ G K + + AL L+ + D GV PN+ YN LI SLC K + AE
Sbjct: 330 PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLC-KGRKFHEAEL 388
Query: 501 LLEDMRLKGLHLNGITRALI 520
L + M GL N +T +++
Sbjct: 389 LFDRMGKIGLRPNDVTYSIL 408
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 143/345 (41%), Gaps = 13/345 (3%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V L+ L+ K A E+FN G + Y I +L K A +
Sbjct: 192 VRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIA 251
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
M TG + +I CK K EA + K + P L+ LC+
Sbjct: 252 HMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQ 311
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
E ++ L+M+D+ + SS++ L + + A L+ +++ G P V+
Sbjct: 312 E-FEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVY 370
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N++I + K A + M GL+P+ TY+ L+ + G+++ A L E
Sbjct: 371 NALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD 430
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+LS Y++LI G+CK + A + EM + ++P V Y L+ C K
Sbjct: 431 TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKG-KIN 489
Query: 497 TAEKLLEDMRLKGLH---------LNGITRA-LIR-AVKELEEDA 530
A +L +M KG+ L+G+ RA LIR AVK E A
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA 534
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 130/293 (44%), Gaps = 10/293 (3%)
Query: 228 CVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH 287
C N+ Y + R + A SVC++M++ G D G +I K K+
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLID---GSLKHKDRK 664
Query: 288 VVYTLARE---KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSV 344
+ + L +E + + P + +I + + + K A + D E +++V
Sbjct: 665 LFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGD-FKEAFGIWDLMINEGCVPNEVTYTAV 723
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG-DMTPAMEMLKLMRSRG 403
I LC+ V+ A+ L SKM P + + +K DM A+E+ + +G
Sbjct: 724 INGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL-KG 782
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
L + TY L+ G+ G++EEA E++ + +TY T+I C+ + A+
Sbjct: 783 LLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAI 842
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+L N M + G++P+ YN LI C+ A + A +L +M +GL N T
Sbjct: 843 ELWNSMTEKGIRPDRVAYNTLIHGCCV-AGEMGKATELRNEMLRQGLIPNNKT 894
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 107/264 (40%), Gaps = 36/264 (13%)
Query: 214 KAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKI 273
K F + + D G + Y I+A S+ F A+ + + MI G +P+ +
Sbjct: 664 KLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAV 723
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEA 333
I+ CK G EA V+ + KM P SV T LD+L +
Sbjct: 724 INGLCKAGFVNEAEVLCS-----KMQPVSSV---------PNQVTYGCFLDILTKGEVDM 769
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
+K ++H A I +G A +N +I + + G + A
Sbjct: 770 QKAV---------------ELHNA-------ILKGLLANTATYNMLIRGFCRQGRIEEAS 807
Query: 394 EMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGY 453
E++ M G+ PD TYT +++ +++A E+ N + R V Y+TLI G
Sbjct: 808 ELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGC 867
Query: 454 CKLEEFDCALKLLNEMKDVGVQPN 477
C E A +L NEM G+ PN
Sbjct: 868 CVAGEMGKATELRNEMLRQGLIPN 891
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 1/209 (0%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
I +I SK G K AF +++ + GCV N+ TY I L + + A +C KM
Sbjct: 684 IYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKM 743
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
S+P+ G + KG + V A K + + LI C++
Sbjct: 744 QPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGR- 802
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
++ A +++ G+ ++++I LCR DV A L + M +G P +N+
Sbjct: 803 IEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNT 862
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
+I AG+M A E+ M +GL P+
Sbjct: 863 LIHGCCVAGEMGKATELRNEMLRQGLIPN 891
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 125 bits (315), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 150/321 (46%), Gaps = 2/321 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
LN +I F + K A+ V K G + T+ I+ L A + ++M+
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
E G PD I++ C+ G A + E+ + + +I SLC+ D +
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR-DGCI 244
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
A+ + + + K ++ ++S++R LC+ + LL M+S P FN +
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
+ + K G + A E+ K M +RG+ P++ TY LM GY ++ EA +L+ +N
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
VT+ +LI+GYC ++ D +K+ + G+ N Y+ L+Q C ++ + AE
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC-QSGKIKLAE 423
Query: 500 KLLEDMRLKGLHLNGITRALI 520
+L ++M G+ + +T ++
Sbjct: 424 ELFQEMVSHGVLPDVMTYGIL 444
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 137/309 (44%), Gaps = 3/309 (0%)
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
AA +F + G ++ TY + L + ++ + + M+ +P+ ++
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR 334
F K GK +EA+ +Y + + P L+ C ++ + A +MLD
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE-ANNMLDLMVRNKC 364
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
I F+S+I+ C +K V + + G ++ ++ + ++G + A E
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+ + M S G+ PDV TY L+ G + G++E+A EI + +K+ L V Y T+I G C
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG 514
K + + A L + GV+PNV Y +I LC K A LL M G N
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG-SLSEANILLRKMEEDGNAPND 543
Query: 515 IT-RALIRA 522
T LIRA
Sbjct: 544 CTYNTLIRA 552
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 92/196 (46%), Gaps = 1/196 (0%)
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
L LD + I + +I CR A ++L K++ G P FN++I
Sbjct: 106 LVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLI 165
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
G ++ A+ ++ M G +PDV TY +++G G A ++L + ++ + +
Sbjct: 166 KGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVK 225
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
TY T+I C+ D A+ L EM+ G++ +V YN L++ LC KA W
Sbjct: 226 ADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC-KAGKWNDGAL 284
Query: 501 LLEDMRLKGLHLNGIT 516
LL+DM + + N IT
Sbjct: 285 LLKDMVSREIVPNVIT 300
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 151/343 (44%), Gaps = 7/343 (2%)
Query: 154 KWVTSGVV--DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLG 211
K + S VV ++L++ +C + GK AL ++K++ +E V V N L+ +F K G
Sbjct: 257 KGIKSSVVTYNSLVRGLCKA-GKWNDGAL--LLKDMVSREI-VPNVITFNVLLDVFVKEG 312
Query: 212 KGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVG 271
K + A E++ + G N TY ++ + A ++ + M+ PD
Sbjct: 313 KLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFT 372
Query: 272 KIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSG 331
+I +C + + V+ ++ + + L+ CQ + +KLA ++ +
Sbjct: 373 SLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK-IKLAEELFQEMVS 431
Query: 332 EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTP 391
+ + ++ LC + A + + G ++ ++I K G +
Sbjct: 432 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED 491
Query: 392 AMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
A + + +G+KP+V TYT ++SG G + EA +L + +++ + + TY+TLIR
Sbjct: 492 AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
+ + + + KL+ EMK G + +I L LD
Sbjct: 552 AHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELD 594
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 85/189 (44%), Gaps = 6/189 (3%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
FS ++ R K + ++ G N +I+ + + A +L +
Sbjct: 91 FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM 150
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G +PD T+ L+ G G++ EA +++ +N + VTY++++ G C+ +
Sbjct: 151 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH-----LNGI 515
AL LL +M++ V+ +V Y+ +I SLC A L ++M KG+ N +
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGC-IDAAISLFKEMETKGIKSSVVTYNSL 269
Query: 516 TRALIRAVK 524
R L +A K
Sbjct: 270 VRGLCKAGK 278
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 80/191 (41%), Gaps = 15/191 (7%)
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A L +MI P P F+ SA ++ ++ K + G+ ++YT +++
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
+ + A +L + K T++TLI+G + A+ L++ M + G QP
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 191
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMR--------------LKGLHLNGITRALIRA 522
+V YN ++ +C ++ D A LL M + L +G A I
Sbjct: 192 DVVTYNSIVNGIC-RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 523 VKELEEDAIEN 533
KE+E I++
Sbjct: 251 FKEMETKGIKS 261
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 125 bits (314), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 155/327 (47%), Gaps = 5/327 (1%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+++L CSS KE ++ G E V+T +L + + K G+ A ++F+
Sbjct: 270 NSILHGYCSSGQPKEAIGFLKKMRSDG-VEPDVVTYSLLMDYLC---KNGRCMEARKIFD 325
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
G TY ++ + + + + M+ G PD +I + K G
Sbjct: 326 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQG 385
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
K +A +V++ R++ + P +I LC+ V+ A+ + E +
Sbjct: 386 KVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGR-VEDAMLYFEQMIDEGLSPGNIVY 444
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
+S+I LC A+ L+ +M+ G FNS+I ++ K G + + ++ +LM
Sbjct: 445 NSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVR 504
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+KP+V TY L++GY G+M+EA ++L+ + + VTY TLI GYCK+ +
Sbjct: 505 IGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMED 564
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSL 488
AL L EM+ GV P++ YN ++Q L
Sbjct: 565 ALVLFKEMESSGVSPDIITYNIILQGL 591
Score = 115 bits (289), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 165/363 (45%), Gaps = 19/363 (5%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEI---GEKEKGVLTVEILNELIALFSKLGKGKAAFE 218
+ LLK +C +E L ++ + G V ++N F K G A+
Sbjct: 162 NILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVING----FFKEGDSDKAYS 217
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+++ D G + + TY I AL + + D A V M++ G +PD I+ +C
Sbjct: 218 TYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 277
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
G+ KEA R + P + L+ LC+ ++ A + D + K I
Sbjct: 278 SSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCME-ARKIFDSMTKRGLKPEI 336
Query: 339 KPFSSVIRSLCR---MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+ ++++ + ++HG LL M+ G P + VF+ +I AY+K G + AM +
Sbjct: 337 TTYGTLLQGYATKGALVEMHG---LLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLV 393
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGY 453
MR +GL P+ TY ++ G++E+A +L + LSP + Y++LI G
Sbjct: 394 FSKMRQQGLNPNAVTYGAVIGILCKSGRVEDA--MLYFEQMIDEGLSPGNIVYNSLIHGL 451
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
C +++ A +L+ EM D G+ N +N +I S C K +EKL E M G+ N
Sbjct: 452 CTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHC-KEGRVIESEKLFELMVRIGVKPN 510
Query: 514 GIT 516
IT
Sbjct: 511 VIT 513
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 143/300 (47%), Gaps = 17/300 (5%)
Query: 233 ETYYFTIE--ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
+ Y F+I A +++ D A V KM + G P++ G +I CK G+ ++A + +
Sbjct: 370 DHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYF 429
Query: 291 TLAREKKMYPPQSVVAFLISSLC---QEDETVKLALDMLDDFSGEARKYAIKP--FSSVI 345
++ + P V LI LC + + +L L+MLD R + F+S+I
Sbjct: 430 EQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLD------RGICLNTIFFNSII 483
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
S C+ V ++ L M+ G P +N++I+ Y AG M AM++L M S GLK
Sbjct: 484 DSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLK 543
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
P+ TY+ L++GY +ME+A + E + + +TY+ +++G + A +L
Sbjct: 544 PNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 603
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL----LEDMRLKGLHLNGITRALIR 521
+ + G Q + YN ++ LC L + L D++L+ N + AL++
Sbjct: 604 YVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLK 663
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 145/331 (43%), Gaps = 24/331 (7%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSR-------RKIFDWAWS 253
N ++ + G+ K A K G + TY ++ L + RKIFD
Sbjct: 270 NSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFD---- 325
Query: 254 VCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC 313
M + G P+ G ++ + G E H + L ++P V + LI +
Sbjct: 326 ---SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 382
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
++ + + L FS + R+ + P + +VI LC+ V A +MI EG
Sbjct: 383 KQGKVDQAMLV----FS-KMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 437
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
PGN V+NS+I A E++ M RG+ + + ++ + G++ E+ +
Sbjct: 438 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 497
Query: 430 ILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + + + +TY+TLI GYC + D A+KLL+ M VG++PN Y+ LI C
Sbjct: 498 LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 557
Query: 490 LKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
K A L ++M G+ + IT +I
Sbjct: 558 -KISRMEDALVLFKEMESSGVSPDIITYNII 587
Score = 92.8 bits (229), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 136/335 (40%), Gaps = 40/335 (11%)
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET---GSLPDSEKVGKIIS 275
V + + GC+ N +Y ++ L A + M + GS PD +I+
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
F K G + +A+ Y ++ + P +I++LC+ K A+++L+
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDK-AMEVLNTMVKNGVM 263
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
++S++ C A L KM S+G P ++ ++ K G A ++
Sbjct: 264 PDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKI 323
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
M RGLKP++ TY L+ GYA G + E +L+ +N + LI Y K
Sbjct: 324 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAK 383
Query: 456 LEEFDCALKLLNEMKDVGVQPN---------------------------VDE-------- 480
+ D A+ + ++M+ G+ PN +DE
Sbjct: 384 QGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIV 443
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
YN LI LC W AE+L+ +M +G+ LN I
Sbjct: 444 YNSLIHGLC-TCNKWERAEELILEMLDRGICLNTI 477
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 118/282 (41%), Gaps = 6/282 (2%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA-HVVYTL 292
TY I R D ++ +I+ G D+ ++ C + +A +V
Sbjct: 89 TYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 148
Query: 293 AREKKMYPPQSVVAFLISSLCQED---ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLC 349
E P L+ LC E+ E ++L L M+ D G + +++VI
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALEL-LHMMADDRGGGSPPDVVSYTTVINGFF 207
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
+ D A + +M+ G P +NS+I+A KA M AME+L M G+ PD
Sbjct: 208 KEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCM 267
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
TY ++ GY + GQ +EA L + + + VTY L+ CK A K+ + M
Sbjct: 268 TYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327
Query: 470 KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLH 511
G++P + Y L+Q K LL+ M G+H
Sbjct: 328 TKRGLKPEITTYGTLLQGYATKGA-LVEMHGLLDLMVRNGIH 368
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/262 (18%), Positives = 98/262 (37%), Gaps = 2/262 (0%)
Query: 191 EKGV-LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
++G+ L N +I K G+ + ++F G N TY I D
Sbjct: 469 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMD 528
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A + M+ G P++ +I+ +CK + ++A V++ + P ++
Sbjct: 529 EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
L Q T A ++ + + + ++ ++ LC+ K A + +
Sbjct: 589 QGLFQTRRTAA-AKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDL 647
Query: 370 PPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACE 429
FN +I A K G A ++ S GL P+ +TY + G +EE +
Sbjct: 648 KLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQ 707
Query: 430 ILNEAKKNHSRLSPVTYHTLIR 451
+ + N + + ++R
Sbjct: 708 LFLSMEDNGCTVDSGMLNFIVR 729
Score = 39.7 bits (91), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 57/293 (19%), Positives = 115/293 (39%), Gaps = 7/293 (2%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
+ N LI K + A E+ + D G N + I++ + + + E M
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELM 502
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+ G P+ +I+ +C GK EA + + + P + LI+ C+
Sbjct: 503 VRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISR- 561
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
++ AL + + I ++ +++ L + + AK L ++ G + +N
Sbjct: 562 MEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 621
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
++ K A++M + + LK + T+ ++ G+ +EA ++ N
Sbjct: 622 ILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNG 681
Query: 439 SRLSPVTYHTL---IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ TY + I G LEE D +L M+D G + N +++ L
Sbjct: 682 LVPNYWTYRLMAENIIGQGLLEELD---QLFLSMEDNGCTVDSGMLNFIVREL 731
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 153/315 (48%), Gaps = 3/315 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N+++ + KLG + A + +K + G + TY I +RK D A+ V +M
Sbjct: 222 NKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPL 281
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G + +I C + EA ++ ++ + +P LI SLC + +
Sbjct: 282 KGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSE 341
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
AL+++ + K I ++ +I SLC A+ LL +M+ +G P +N++I
Sbjct: 342 -ALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALI 400
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ Y K G + A+++++LM SR L P+ TY L+ GY + +A +LN+ +
Sbjct: 401 NGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVL 459
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
VTY++LI G C+ FD A +LL+ M D G+ P+ Y +I SLC K+ A
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC-KSKRVEEACD 518
Query: 501 LLEDMRLKGLHLNGI 515
L + + KG++ N +
Sbjct: 519 LFDSLEQKGVNPNVV 533
Score = 118 bits (296), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 163/367 (44%), Gaps = 33/367 (8%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L+K C K V+ ++ ++ E+ K + V N LI + G +A+ + +
Sbjct: 432 NELIKGYC----KSNVHKAMGVLNKMLER-KVLPDVVTYNSLIDGQCRSGNFDSAYRLLS 486
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
D G V +Q TY I++L + K + A + + + + G P+ +I +CK G
Sbjct: 487 LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAG 546
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
K EAH++ K P LI LC + + + L + K ++P
Sbjct: 547 KVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATL-----LEEKMVKIGLQPT 601
Query: 342 SS----VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
S +I L + D A + +M+S G P + + I Y + G + A +M+
Sbjct: 602 VSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMA 661
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
MR G+ PD++TY+ L+ GY + GQ A ++L + S T+ +LI+ +++
Sbjct: 662 KMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMK 721
Query: 458 ------------------EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAE 499
EFD ++LL +M + V PN Y KLI +C + + R AE
Sbjct: 722 YGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGIC-EVGNLRVAE 780
Query: 500 KLLEDMR 506
K+ + M+
Sbjct: 781 KVFDHMQ 787
Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 129/274 (47%), Gaps = 2/274 (0%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A ++F K D C TY I++L + A ++ ++M ETG P+ +I
Sbjct: 307 AMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLID 366
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
C K ++A + EK + P LI+ C+ ++ A+D+++
Sbjct: 367 SLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRG-MIEDAVDVVELMESRKLS 425
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+ ++ +I+ C+ +VH A +L+KM+ P +NS+I ++G+ A +
Sbjct: 426 PNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
L LM RGL PD +TYT ++ ++EEAC++ + ++ + V Y LI GYCK
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ D A +L +M PN +N LI LC
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLC 578
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 140/334 (41%), Gaps = 38/334 (11%)
Query: 191 EKGVL-TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
EKG++ V N LI + K G + A +V N TY I+ + +
Sbjct: 386 EKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHK 445
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A V KM+E LPD +I C+ G A+ + +L ++ + P Q +I
Sbjct: 446 -AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMI 504
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGP 369
SLC+ + V+ A D+ D + + ++++I C+ V A +L KM+S+
Sbjct: 505 DSLCKS-KRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNC 563
Query: 370 PPGNAVFNSVISAYS-----------------------------------KAGDMTPAME 394
P + FN++I K GD A
Sbjct: 564 LPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYS 623
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+ M S G KPD +TYT + Y G++ +A +++ + ++N TY +LI+GY
Sbjct: 624 RFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYG 683
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
L + + A +L M+D G +P+ + LI+ L
Sbjct: 684 DLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 161/372 (43%), Gaps = 22/372 (5%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
L+K++C S K E L ++E G K + LI K + A E+ +
Sbjct: 328 VLIKSLCGSERKSEALNLVKEMEETGIKP----NIHTYTVLIDSLCSQCKFEKARELLGQ 383
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ G + N TY I +R + + A V E M P++ ++I +CK
Sbjct: 384 MLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNV 443
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIK 339
K V+ + E+K+ P LI C+ D +L L +++D ++
Sbjct: 444 HKAMGVLNKML-ERKVLPDVVTYNSLIDGQCRSGNFDSAYRL-LSLMNDRGLVPDQWT-- 499
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
++S+I SLC+ K V A L + +G P ++ ++I Y KAG + A ML+ M
Sbjct: 500 -YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV--TYHTLIRGYCKLE 457
S+ P+ T+ L+ G G+++EA L E K L P T LI K
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEA--TLLEEKMVKIGLQPTVSTDTILIHRLLKDG 616
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL--KALDWRTAEKLLEDMRLKGLHLNGI 515
+FD A +M G +P+ Y IQ+ C + LD AE ++ MR G+ +
Sbjct: 617 DFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLD---AEDMMAKMRENGVSPDLF 673
Query: 516 T-RALIRAVKEL 526
T +LI+ +L
Sbjct: 674 TYSSLIKGYGDL 685
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 110/220 (50%), Gaps = 8/220 (3%)
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
DE ++ ++ML+D I ++ ++ C++ +V A +SK++ G P
Sbjct: 200 DEMKQVYMEMLEDKVCPN----IYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFT 255
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+ S+I Y + D+ A ++ M +G + + YT L+ G +++EA ++ + K
Sbjct: 256 YTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMK 315
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+ + TY LI+ C E AL L+ EM++ G++PN+ Y LI SLC + +
Sbjct: 316 DDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQC-KF 374
Query: 496 RTAEKLLEDMRLKGLHLNGIT-RALIRAV--KELEEDAIE 532
A +LL M KGL N IT ALI + + EDA++
Sbjct: 375 EKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVD 414
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 119/255 (46%), Gaps = 1/255 (0%)
Query: 235 YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR 294
Y + +L+R + D V +M+E P+ K+++ +CK G +EA+ +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 295 EKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDV 354
E + P LI CQ + + A + ++ + + ++ +I LC + +
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKD-LDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 355 HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
A L KM + P + +I + + + A+ ++K M G+KP+++TYT L
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 415 MSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV 474
+ + + E+A E+L + + + +TY+ LI GYCK + A+ ++ M+ +
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424
Query: 475 QPNVDEYNKLIQSLC 489
PN YN+LI+ C
Sbjct: 425 SPNTRTYNELIKGYC 439
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 97/268 (36%), Gaps = 53/268 (19%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIE------------------ALSR 244
LI + LG+ AF+V + D GC +Q T+ I+ A+S
Sbjct: 678 LIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSN 737
Query: 245 RKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSV 304
FD + EKM+E P+++ K+I C+ G + A V+ + + P +
Sbjct: 738 MMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSEL 797
Query: 305 VAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM 364
V F++++ C++K + A ++ M
Sbjct: 798 V-----------------------------------FNALLSCCCKLKKHNEAAKVVDDM 822
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
I G P +I K G+ + + + G D + ++ G G +
Sbjct: 823 ICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLV 882
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRG 452
E E+ N +KN + S TY LI G
Sbjct: 883 EAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 130/343 (37%), Gaps = 22/343 (6%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+AL+ +C+ KE L + + +IG + TV LI K G A+ F
Sbjct: 571 NALIHGLCADGKLKEATLLEEKMVKIGLQP----TVSTDTILIHRLLKDGDFDHAYSRFQ 626
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ G + TY I+ R A + KM E G PD +I + G
Sbjct: 627 QMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLG 686
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ---------EDETVKLA----LDMLDD 328
+ A V R+ P Q LI L + E E ++ D + +
Sbjct: 687 QTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVE 746
Query: 329 FSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMI-SEGPPPGNAVFNSVISAY 383
+ ++++ P + +I +C + ++ A+ + M +EG P VFN+++S
Sbjct: 747 LLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCC 806
Query: 384 SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP 443
K A +++ M G P + + L+ G G+ E + +
Sbjct: 807 CKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDE 866
Query: 444 VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
+ + +I G K + +L N M+ G + + Y+ LI+
Sbjct: 867 LAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIE 909
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 151/356 (42%), Gaps = 6/356 (1%)
Query: 161 VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVF 220
+ +L+ C + +L D + EIG K + N +I K + AF+ F
Sbjct: 158 IGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPD----IVAYNAIIDSLCKTKRVNDAFDFF 213
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG 280
+ G N TY + L + A + MI+ P+ ++ F K
Sbjct: 214 KEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKN 273
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
GK EA ++ + P + LI+ LC D + A M D + +
Sbjct: 274 GKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR-IDEANQMFDLMVSKGCLADVVS 332
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
++++I C+ K V L +M G +N++I + +AGD+ A E M
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 392
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G+ PD++TY L+ G + G++E+A I + +K L VTY T+IRG CK + +
Sbjct: 393 FFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVE 452
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A L + G++P++ Y ++ LC K L E L M+ +GL N T
Sbjct: 453 EAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL-LHEVEALYTKMKQEGLMKNDCT 507
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 100/216 (46%), Gaps = 7/216 (3%)
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A+D+ D +I F+ ++ ++ ++K +L KM G FN VI+
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
+ ++ A+ +L M G +PD T L++G+ ++ +A ++++ + +
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
V Y+ +I CK + + A E++ G++PNV Y L+ LC + W A +L
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLC-NSSRWSDAARL 247
Query: 502 LEDMRLKGLHLNGITRALIRAVKELEEDAIENGEAL 537
L DM K + N IT + L + ++NG+ L
Sbjct: 248 LSDMIKKKITPNVITYS------ALLDAFVKNGKVL 277
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 84/169 (49%), Gaps = 3/169 (1%)
Query: 350 RMKDV--HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPD 407
R++D+ + A L S M+ P P FN ++SA K + + K M G++ D
Sbjct: 60 RLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRND 119
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
+YT+ +++ + Q+ A IL + K VT +L+ G+C+ A+ L++
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+M ++G +P++ YN +I SLC K A +++ KG+ N +T
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLC-KTKRVNDAFDFFKEIERKGIRPNVVT 227
Score = 69.3 bits (168), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 1/165 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F+ VI C V A ++L KM+ G P S+++ + + ++ A+ ++ M
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G KPD+ Y ++ ++ +A + E ++ R + VTY L+ G C +
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
A +LL++M + PNV Y+ L+ + +K A++L E+M
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAF-VKNGKVLEAKELFEEM 286
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 143/321 (44%), Gaps = 3/321 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I K G A +FN+ G A+ TY I L +D + +MI
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+PD +I F K GK EA +Y + + P LI C+E+ + A
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN-CLHEA 369
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
M D + + I +S +I S C+ K V L ++ S+G P +N+++
Sbjct: 370 NQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLG 429
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ ++G + A E+ + M SRG+ P V TY L+ G + G++ +A EI + +K+ L
Sbjct: 430 FCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLG 489
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
Y+ +I G C + D A L + D GV+P+V YN +I LC K A+ L
Sbjct: 490 IGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKG-SLSEADMLF 548
Query: 503 EDMRLKGLHLNGIT-RALIRA 522
M+ G + T LIRA
Sbjct: 549 RKMKEDGCTPDDFTYNILIRA 569
Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 166/383 (43%), Gaps = 24/383 (6%)
Query: 168 ICSSVGKKEVYALWDIV------KEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+CS+V + + Y D+V E+ E + T+ I+ I + + K AF V
Sbjct: 76 LCSAVARTKQY---DLVLGFCKGMELNGIEHDMYTMTIM---INCYCRKKKLLFAFSVLG 129
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+ G + T+ + A ++ ++M+E PD V +I+ C G
Sbjct: 130 RAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKG 189
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPF 341
+ EA V+ E P + +++ LC+ + LALD+ K ++ +
Sbjct: 190 RVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA-LALDLFRKMEERNIKASVVQY 248
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
S VI SLC+ A +L ++M +G ++S+I G +ML+ M
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
R + PDV T++ L+ + G++ EA E+ NE +TY++LI G+CK
Sbjct: 309 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 368
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT----- 516
A ++ + M G +P++ Y+ LI S C KA +L ++ KGL N IT
Sbjct: 369 ANQMFDLMVSKGCEPDIVTYSILINSYC-KAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 517 -----RALIRAVKELEEDAIENG 534
+ A KEL ++ + G
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRG 450
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 122/298 (40%), Gaps = 1/298 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V + LI +F K GK A E++N+ G + TY I+ + A + +
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD 374
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
M+ G PD +I+ +CK + + ++ K + P L+ CQ
Sbjct: 375 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSG 434
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ + A ++ + ++ + ++ LC +++ A + KM G ++
Sbjct: 435 K-LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIY 493
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N +I A + A + + +G+KPDV TY ++ G G + EA + + K+
Sbjct: 494 NIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
+ TY+ LIR + +++L+ EMK G + +I L + LD
Sbjct: 554 DGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLD 611
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 3/149 (2%)
Query: 354 VHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTG 413
V+ A L MI P P FN + SA ++ + K M G++ D+YT T
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 414 LMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
+++ Y ++ A +L A K +T+ TL+ G+C A+ L++ M ++
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 474 VQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
+P++ + LI LCLK R +E L+
Sbjct: 171 QRPDLVTVSTLINGLCLKG---RVSEALV 196
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 118 bits (296), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 145/337 (43%), Gaps = 19/337 (5%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
+ + LL +C E L D + E+G K T+ LN L+ GK A +
Sbjct: 160 IFNTLLNGLCLECRVSEALELVDRMVEMGHKP----TLITLNTLVNGLCLNGKVSDAVVL 215
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
++ + G N+ TY + + + A + KM E D+ K II CK
Sbjct: 216 IDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKY 336
G A ++ K LI C D+ KL DM+ K
Sbjct: 276 DGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI--------KR 327
Query: 337 AIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
I P FS +I S + + A LL +M+ G P +NS+I + K + A
Sbjct: 328 KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEA 387
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
++M+ LM S+G PD+ T+ L++GY ++++ E+ E + VTY+TL++G
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 447
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+C+ + + A KL EM V+P++ Y L+ LC
Sbjct: 448 FCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLC 484
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 139/278 (50%), Gaps = 6/278 (2%)
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM-Y 299
A+++ K ++ ++C++M G + +I+ FC+ K ++ T+ + K+ Y
Sbjct: 97 AIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKL--SYAFSTMGKIMKLGY 154
Query: 300 PPQSVV-AFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
P +V+ L++ LC E V AL+++D K + ++++ LC V A
Sbjct: 155 EPDTVIFNTLLNGLCLECR-VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAV 213
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
L+ +M+ G P + V++ K+G AME+L+ M R +K D Y+ ++ G
Sbjct: 214 VLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G ++ A + NE + + +TY+TLI G+C +D KLL +M + PNV
Sbjct: 274 CKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNV 333
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++ LI S +K R A++LL++M +G+ N IT
Sbjct: 334 VTFSVLIDSF-VKEGKLREADQLLKEMMQRGIAPNTIT 370
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 143/334 (42%), Gaps = 5/334 (1%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
K G AF +FN+ G A+ TY I +D + MI+ P+
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
+I F K GK +EA + ++ + P LI C+E+ ++ A+ M+
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR-LEEAIQMV 391
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
D + I F+ +I C+ + L +M G +N+++ + ++
Sbjct: 392 DLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQS 451
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
G + A ++ + M SR ++PD+ +Y L+ G + G++E+A EI + +K+ L Y
Sbjct: 452 GKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIY 511
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
+I G C + D A L + GV+ + YN +I LC K A+ L M
Sbjct: 512 MIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKD-SLSKADILFRKMT 570
Query: 507 LKGLHLNGIT-RALIRAVKELEEDAIENGEALVE 539
+G + +T LIRA L +D L+E
Sbjct: 571 EEGHAPDELTYNILIRA--HLGDDDATTAAELIE 602
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 110/258 (42%), Gaps = 39/258 (15%)
Query: 300 PPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGA 357
P +V+ F L S++ + + +L L + + ++I S +I CR + + A
Sbjct: 84 PLPTVIDFNRLFSAIAKTKQ-YELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYA 142
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
+ + K++ G P +FN++++ ++ A+E++ M G KP + T L++G
Sbjct: 143 FSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNG 202
Query: 418 YA-NG----------------------------------GQMEEACEILNEAKKNHSRLS 442
NG GQ A E+L + ++ + +L
Sbjct: 203 LCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLD 262
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
V Y +I G CK D A L NEM+ G + ++ YN LI C A W KLL
Sbjct: 263 AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC-NAGRWDDGAKLL 321
Query: 503 EDMRLKGLHLNGITRALI 520
DM + + N +T +++
Sbjct: 322 RDMIKRKISPNVVTFSVL 339
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 1/225 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+ N LI + K + E+F + G +AN TY ++ + + A + +
Sbjct: 403 IMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQ 462
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M+ PD ++ C G+ ++A ++ + KM + +I +C
Sbjct: 463 EMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNAS 522
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ V A D+ + K + ++ +I LCR + A L KM EG P +
Sbjct: 523 K-VDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTY 581
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG 421
N +I A+ D T A E+++ M+S G DV T +++ ++G
Sbjct: 582 NILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSG 626
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 1/160 (0%)
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A L MI P P FN + SA +K + + K M S+G+ +YT + +++
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
+ ++ A + + K V ++TL+ G C AL+L++ M ++G +P
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ N L+ LCL A L++ M G N +T
Sbjct: 192 TLITLNTLVNGLCLNG-KVSDAVVLIDRMVETGFQPNEVT 230
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 90/199 (45%), Gaps = 1/199 (0%)
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A+D+ D + F+ + ++ + K L +M S+G + +I+
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
+ + ++ A + + G +PD + L++G ++ EA E+++ + +
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+ +T +TL+ G C + A+ L++ M + G QPN Y ++ +C K+ A +L
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMC-KSGQTALAMEL 250
Query: 502 LEDMRLKGLHLNGITRALI 520
L M + + L+ + ++I
Sbjct: 251 LRKMEERNIKLDAVKYSII 269
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/329 (18%), Positives = 124/329 (37%), Gaps = 36/329 (10%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI F G+ ++ N T+ I++ + A + ++M++
Sbjct: 302 NTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQ 361
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P++ +I FCK + +EA + L K P LI+ C+ + +
Sbjct: 362 RGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR-ID 420
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
L++ + S ++++++ C+ + AK L +M+S P + ++
Sbjct: 421 DGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILL 480
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA----CEILNEAKK 436
G++ A+E+ + ++ D+ Y ++ G N ++++A C + + K
Sbjct: 481 DGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVK 540
Query: 437 NHSRLSPV-------------------------------TYHTLIRGYCKLEEFDCALKL 465
+R + TY+ LIR + ++ A +L
Sbjct: 541 LDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAEL 600
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
+ EMK G +V +I L LD
Sbjct: 601 IEEMKSSGFPADVSTVKMVINMLSSGELD 629
>sp|Q9LR67|PPR9_ARATH Pentatricopeptide repeat-containing protein At1g03560,
mitochondrial OS=Arabidopsis thaliana GN=At1g03560 PE=2
SV=1
Length = 660
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 201/466 (43%), Gaps = 33/466 (7%)
Query: 42 LYRSSRFLSESPAANPKDESSFSPETDFSSRSFGENEYAQMDPSADAVESKEEEAYEIDG 101
LY++ FLS+ +P S S F+S S E+ ++P D + + +
Sbjct: 26 LYKNGDFLSDDSKCSPLSSSRTSVRWVFNSSSLPPPEW--IEPFNDVSDLVKSNRNLLPS 83
Query: 102 DKLENVLSLLQSSVDGYLESSLDSF----ELDLHEDFVLKVLETPLVLGENLVC--FFKW 155
+ +L+LL S +ES+LD F + L +FV VL++ + + + FF W
Sbjct: 84 PWVSQILNLLDGSAS--MESNLDGFCRKFLIKLSPNFVSFVLKSDEIREKPDIAWSFFCW 141
Query: 156 VTS------------GVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNEL 203
+VD L A K+V + + EI +K + +TV N L
Sbjct: 142 SRKQKKYTHNLECYVSLVDVLALA-------KDVDRIRFVSSEI-KKFEFPMTVSAANAL 193
Query: 204 IALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGS 263
I F KLG + V+ K + G TY F + L D A V E M E+G
Sbjct: 194 IKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVM-ESGR 252
Query: 264 L-PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+ PD +I +CK G+ ++A + E + + + + C D
Sbjct: 253 IKPDIVTYNTMIKGYCKAGQTQKA-MEKLRDMETRGHEADKITYMTMIQACYADSDFGSC 311
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+ + + + + FS VI LC+ ++ T+ MI +G P A++ +I
Sbjct: 312 VALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDG 371
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
Y+K+G + A+ +L M G KPDV TY+ +++G G++EEA + + + + ++
Sbjct: 372 YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAIN 431
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ Y +LI G K D A +L EM + G + YN LI +
Sbjct: 432 SMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAF 477
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 79/171 (46%), Gaps = 4/171 (2%)
Query: 323 LDMLDDFSGEARKY----AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+D + S E +K+ + +++I+S ++ V + KM G P +N
Sbjct: 168 VDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNF 227
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+++ A + A + ++M S +KPD+ TY ++ GY GQ ++A E L + +
Sbjct: 228 LMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRG 287
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+TY T+I+ +F + L EM + G+Q ++ +I LC
Sbjct: 288 HEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLC 338
Score = 40.0 bits (92), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
L+ + G +EE + + K+N + TY+ L+ G D A ++ M+
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 472 VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++P++ YN +I+ C KA + A + L DM +G + IT
Sbjct: 251 GRIKPDIVTYNTMIKGYC-KAGQTQKAMEKLRDMETRGHEADKIT 294
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 147/348 (42%), Gaps = 23/348 (6%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
L+ +C E L D + E+G K + +N L+ GK A + +K
Sbjct: 163 TLINGLCLEGRVSEALELVDRMVEMGHKPDLI----TINTLVNGLCLSGKEAEAMLLIDK 218
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+YGC N TY + + + A + KM E D+ K II CK G
Sbjct: 219 MVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 278
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIK 339
A ++ K + LI C D+ KL DM+ K I
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI--------KRKIN 330
Query: 340 P----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
P FS +I S + + A+ L +MI G P + S+I + K + A +M
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
+ LM S+G P++ T+ L++GY ++++ E+ + VTY+TLI+G+C+
Sbjct: 391 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 450
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
L + + A +L EM V PN+ Y L+ LC D +EK LE
Sbjct: 451 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLC----DNGESEKALE 494
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 135/321 (42%), Gaps = 3/321 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I K G AF +FN+ G N TY I +D + MI+
Sbjct: 269 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P+ +I F K GK +EA ++ + + P LI C+E+ K A
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK-A 387
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
M+D + I+ F+ +I C+ + L KM G +N++I
Sbjct: 388 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 447
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ + G + A E+ + M SR + P++ TY L+ G + G+ E+A EI + +K+ L
Sbjct: 448 FCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 507
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
Y+ +I G C + D A L + GV+P V YN +I LC K AE L
Sbjct: 508 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKG-PLSEAELLF 566
Query: 503 EDMRLKGLHLNGIT-RALIRA 522
M G +G T LIRA
Sbjct: 567 RKMEEDGHAPDGWTYNILIRA 587
Score = 109 bits (272), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 147/330 (44%), Gaps = 7/330 (2%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
L+ +I F + K AF K G N T+ I L A + ++M+
Sbjct: 126 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
E G PD + +++ C GK EA ++ E P +++ +C+ +T
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
LA+++L K +S +I LC+ + A L ++M +G +N +
Sbjct: 246 -LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNIL 304
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I + AG ++L+ M R + P+V T++ L+ + G++ EA E+ E H
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMI--HR 362
Query: 440 RLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
++P +TY +LI G+CK D A ++++ M G PN+ +N LI C KA
Sbjct: 363 GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYC-KANRIDD 421
Query: 498 AEKLLEDMRLKGLHLNGIT-RALIRAVKEL 526
+L M L+G+ + +T LI+ EL
Sbjct: 422 GLELFRKMSLRGVVADTVTYNTLIQGFCEL 451
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 135/278 (48%), Gaps = 6/278 (2%)
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM-Y 299
A+++ K +D ++C++M G + + +I+ FC+ K A + + K+ Y
Sbjct: 97 AIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAF--SAMGKIIKLGY 154
Query: 300 PPQSVV-AFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
P ++ + LI+ LC E V AL+++D K + ++++ LC A
Sbjct: 155 EPNTITFSTLINGLCLEGR-VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAM 213
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
L+ KM+ G P + V++ K+G AME+L+ M R +K D Y+ ++ G
Sbjct: 214 LLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G ++ A + NE + + +TY+ LI G+C +D KLL +M + PNV
Sbjct: 274 CKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNV 333
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++ LI S +K R AE+L ++M +G+ + IT
Sbjct: 334 VTFSVLIDSF-VKEGKLREAEELHKEMIHRGIAPDTIT 370
Score = 92.8 bits (229), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 135/307 (43%), Gaps = 30/307 (9%)
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE---KKMYPPQSVV 305
D A + MI + LP ++ S K K+ +V L ++ K + +
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAI---AKTKQYDLVLALCKQMELKGIAHNLYTL 126
Query: 306 AFLISSLCQEDETVKLALDMLDDFS--GEARKYAIKP----FSSVIRSLCRMKDVHGAKT 359
+ +I+ C+ KL L FS G+ K +P FS++I LC V A
Sbjct: 127 SIMINCFCR---CRKLCLA----FSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALE 179
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
L+ +M+ G P N++++ +G AM ++ M G +P+ TY +++
Sbjct: 180 LVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMC 239
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
GQ A E+L + ++ + +L V Y +I G CK D A L NEM+ G+ N+
Sbjct: 240 KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNII 299
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRAL----------IRAVKELEED 529
YN LI C A W KLL DM + ++ N +T ++ +R +EL ++
Sbjct: 300 TYNILIGGFC-NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKE 358
Query: 530 AIENGEA 536
I G A
Sbjct: 359 MIHRGIA 365
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 87/210 (41%), Gaps = 1/210 (0%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
GC N T+ I + D + KM G + D+ +I FC+ GK A
Sbjct: 398 GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVA 457
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
++ +K+ P L+ LC E+ K AL++ + + I ++ +I
Sbjct: 458 KELFQEMVSRKVPPNIVTYKILLDGLCDNGESEK-ALEIFEKIEKSKMELDIGIYNIIIH 516
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
+C V A L + +G PG +N +I K G ++ A + + M G P
Sbjct: 517 GMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAP 576
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKK 436
D +TY L+ + G ++ +++ E K+
Sbjct: 577 DGWTYNILIRAHLGDGDATKSVKLIEELKR 606
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/333 (19%), Positives = 124/333 (37%), Gaps = 37/333 (11%)
Query: 192 KGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDW 250
KG+ T + N LI F G+ ++ N T+ I++ +
Sbjct: 292 KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE 351
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A + ++MI G PD+ +I FCK +A+ + L K P LI+
Sbjct: 352 AEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 411
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
C+ + + L++ S ++++I+ C + ++ AK L +M+S P
Sbjct: 412 GYCKANR-IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVP 470
Query: 371 PGN-----------------------------------AVFNSVISAYSKAGDMTPAMEM 395
P ++N +I A + A ++
Sbjct: 471 PNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 530
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
+ +G+KP V TY ++ G G + EA + + +++ TY+ LIR +
Sbjct: 531 FCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLG 590
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ ++KL+ E+K G + +I L
Sbjct: 591 DGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 115 bits (289), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 144/315 (45%), Gaps = 16/315 (5%)
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
AA E+F++ + GC N+ T+ + + + D + M G LP+ I+
Sbjct: 165 AARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIV 224
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV---KLALDM-LDDFS 330
S FC+ G+ ++ + RE+ + P IS+LC+E + + ++ DM LD++
Sbjct: 225 SSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYL 284
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
G R +I ++ +++ C++ + AKTL + +N + + G
Sbjct: 285 GLPRPNSIT-YNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFI 343
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A +LK M +G+ P +Y+Y LM G G + +A I+ K+N VTY L+
Sbjct: 344 EAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLL 403
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT-----AEKLLEDM 505
GYC + + D A LL EM PN N L+ SL W+ AE+LL M
Sbjct: 404 HGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSL------WKMGRISEAEELLRKM 457
Query: 506 RLKGLHLNGITRALI 520
KG L+ +T +I
Sbjct: 458 NEKGYGLDTVTCNII 472
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 158/357 (44%), Gaps = 20/357 (5%)
Query: 162 DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
+ L++A+C S L+D + E G K T IL + + K G E+ N
Sbjct: 151 NLLIRALCDSSCVDAARELFDEMPEKGCKPNE-FTFGIL---VRGYCKAGLTDKGLELLN 206
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGG 281
+G + N+ Y + + R D + + EKM E G +PD IS CK G
Sbjct: 207 AMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEG 266
Query: 282 KAKEAHVVYT---------LAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
K +A +++ L R + + F L ++ +T+ ++ DD +
Sbjct: 267 KVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLA-- 324
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
+++ ++ ++ L R A+T+L +M +G P +N ++ K G ++ A
Sbjct: 325 ----SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDA 380
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
++ LM+ G+ PD TY L+ GY + G+++ A +L E +N+ + T + L+
Sbjct: 381 KTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHS 440
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
K+ A +LL +M + G + N ++ LC + A ++++ MR+ G
Sbjct: 441 LWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSG-ELDKAIEIVKGMRVHG 496
Score = 82.4 bits (202), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 140/339 (41%), Gaps = 25/339 (7%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N ++ F K+G + A +F + +A+ ++Y ++ L R F A +V ++M +
Sbjct: 295 NLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTD 354
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P ++ CK G +A + L + + P L+ C + V
Sbjct: 355 KGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGK-VD 413
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A +L + + ++ SL +M + A+ LL KM +G N ++
Sbjct: 414 AAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIV 473
Query: 381 SAYSKAGDMTPAMEMLKLMRSRG-----------------------LKPDVYTYTGLMSG 417
+G++ A+E++K MR G PD+ TY+ L++G
Sbjct: 474 DGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNG 533
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
G+ EA + E + V Y+ I +CK + A ++L +M+ G +
Sbjct: 534 LCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKS 593
Query: 478 VDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++ YN LI L +K + L+++M+ KG+ N T
Sbjct: 594 LETYNSLILGLGIKNQIFEI-HGLMDEMKEKGISPNICT 631
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 146/343 (42%), Gaps = 24/343 (6%)
Query: 183 IVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEAL 242
++K++ +K G ++ N L+ KLG A + G + TY +
Sbjct: 348 VLKQMTDKGIGP-SIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGY 406
Query: 243 SRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQ 302
D A S+ ++M+ LP++ ++ K G+ EA + EK
Sbjct: 407 CSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDT 466
Query: 303 SVVAFLISSLC---QEDETVKLA------------------LDMLDDFSGEARKYA-IKP 340
++ LC + D+ +++ + ++DD E +
Sbjct: 467 VTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLIT 526
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+S+++ LC+ AK L ++M+ E P + +N I + K G ++ A +LK M
Sbjct: 527 YSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDME 586
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+G + TY L+ G Q+ E +++E K+ + TY+T I+ C+ E+ +
Sbjct: 587 KKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVE 646
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLE 503
A LL+EM + PNV + LI++ C K D+ A+++ E
Sbjct: 647 DATNLLDEMMQKNIAPNVFSFKYLIEAFC-KVPDFDMAQEVFE 688
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 104/215 (48%), Gaps = 6/215 (2%)
Query: 300 PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P LI +LC + V A ++ D+ + K F ++R C+
Sbjct: 145 PQTYTFNLLIRALC-DSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLE 203
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
LL+ M S G P ++N+++S++ + G + +M++ MR GL PD+ T+ +S
Sbjct: 204 LLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALC 263
Query: 420 NGGQMEEACEILNEAKKNH----SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
G++ +A I ++ + + R + +TY+ +++G+CK+ + A L +++
Sbjct: 264 KEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDL 323
Query: 476 PNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
++ YN +Q L ++ + AE +L+ M KG+
Sbjct: 324 ASLQSYNIWLQGL-VRHGKFIEAETVLKQMTDKGI 357
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 86/175 (49%), Gaps = 5/175 (2%)
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
K ++ ++ ++ S + + V L M+ G P FN +I A + + A E
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+ M +G KP+ +T+ L+ GY G ++ E+LN + + V Y+T++ +C
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL--KALDWRTAEKLLEDMRL 507
+ D + K++ +M++ G+ P++ +N I +LC K LD A ++ DM L
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLD---ASRIFSDMEL 280
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 38/170 (22%)
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSR----------------------------------- 402
SV+S ++K+ + A +L+RSR
Sbjct: 80 SVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMV 139
Query: 403 --GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G+ P YT+ L+ + ++ A E+ +E + + + T+ L+RGYCK D
Sbjct: 140 LCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTD 199
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
L+LLN M+ GV PN YN ++ S C + + +EK++E MR +GL
Sbjct: 200 KGLELLNAMESFGVLPNKVIYNTIVSSFCREGRN-DDSEKMVEKMREEGL 248
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 117/292 (40%), Gaps = 47/292 (16%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALS-RRKIFDWAWSVCEKMI 259
N I F K GK +AF V GC + ETY I L + +IF+ + ++M
Sbjct: 563 NIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFE-IHGLMDEMK 621
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
E G P+ I + C+G K ++A + +K + P +LI + C+
Sbjct: 622 EKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCK----- 676
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
+ DF A + F + + S+C K+ G +L+ FN +
Sbjct: 677 ------VPDFD-----MAQEVFETAV-SICGQKE--GLYSLM--------------FNEL 708
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
++ AG + A E+L+ + RG + + Y L+ ++E A IL++
Sbjct: 709 LA----AGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGY 764
Query: 440 RLSPVTYHTLIRGYCKL---EEFDCALKLLNEMKDVG-----VQPNVDEYNK 483
P +I G K+ +E + + EM VG V PN + ++
Sbjct: 765 GFDPAALMPVIDGLGKMGNKKEANSFADKMMEMASVGEVANKVDPNARDIHQ 816
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 115 bits (288), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 141/297 (47%), Gaps = 3/297 (1%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G V + Y+ + ++ ++ + ++M G P+ I C+ K +EA
Sbjct: 194 GLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEA 253
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
++ L ++ + P + +I C+ V+ A + + + F +++
Sbjct: 254 EKMFELMKKHGVLPNLYTYSAMIDGYCKTG-NVRQAYGLYKEILVAELLPNVVVFGTLVD 312
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
C+ +++ A++L M+ G P V+N +I + K+G+M A+ +L M S L P
Sbjct: 313 GFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSP 372
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
DV+TYT L++G Q+ EA + + K S TY++LI GYCK + AL L
Sbjct: 373 DVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLC 432
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRA 522
+EM GV+PN+ ++ LI C D + A L +M +KG+ + +T ALI A
Sbjct: 433 SEMTASGVEPNIITFSTLIDGYC-NVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDA 488
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 141/324 (43%), Gaps = 5/324 (1%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
A++ C + ++ Y L+ KEI E + V + L+ F K + A +F
Sbjct: 274 AMIDGYCKTGNVRQAYGLY---KEILVAEL-LPNVVVFGTLVDGFCKARELVTARSLFVH 329
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+G N Y I + A + +M PD +I+ C +
Sbjct: 330 MVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQ 389
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
EA+ ++ + ++++P + LI C+E ++ ALD+ + + + I FS
Sbjct: 390 VAEANRLFQKMKNERIFPSSATYNSLIHGYCKE-YNMEQALDLCSEMTASGVEPNIITFS 448
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
++I C ++D+ A L +M +G P + ++I A+ K +M A+ + M
Sbjct: 449 TLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEA 508
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G+ P+ +T+ L+ G+ G++ A + E + S + V + LI G C+ A
Sbjct: 509 GIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRA 568
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQ 486
+ ++M+ G+ P++ Y +++
Sbjct: 569 SRFFSDMRSCGITPDICSYVSMLK 592
Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 126/278 (45%), Gaps = 4/278 (1%)
Query: 208 SKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDS 267
+K+ + + FE+ K +G + N TY I+ + A+ + ++++ LP+
Sbjct: 248 NKMEEAEKMFELMKK---HGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNV 304
Query: 268 EKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLD 327
G ++ FCK + A ++ + + P V LI C+ ++ A+ +L
Sbjct: 305 VVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLE-AVGLLS 363
Query: 328 DFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAG 387
+ + ++ +I LC V A L KM +E P +A +NS+I Y K
Sbjct: 364 EMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEY 423
Query: 388 DMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYH 447
+M A+++ M + G++P++ T++ L+ GY N ++ A + E VTY
Sbjct: 424 NMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYT 483
Query: 448 TLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
LI + K AL+L ++M + G+ PN + L+
Sbjct: 484 ALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLV 521
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 71/164 (43%), Gaps = 3/164 (1%)
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
S++ L R + MIS G P ++ + K G + ++L M S
Sbjct: 169 SILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSL 228
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV-TYHTLIRGYCKLEEFDC 461
G+KP+VY YT + +MEEA E + E K H L + TY +I GYCK
Sbjct: 229 GIKPNVYIYTIYILDLCRDNKMEEA-EKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQ 287
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
A L E+ + PNV + L+ C KA + TA L M
Sbjct: 288 AYGLYKEILVAELLPNVVVFGTLVDGFC-KARELVTARSLFVHM 330
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 94/235 (40%), Gaps = 1/235 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI + K + A ++ ++ G N T+ I+ + A + +M
Sbjct: 413 NSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTI 472
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G +PD +I K KEA +Y+ E ++P A L+ +E +
Sbjct: 473 KGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGR-LS 531
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
+A+D + + + + F+ +I LC+ + A S M S G P + S++
Sbjct: 532 VAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSML 591
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+ + +T M + M G+ P++ L Y G ++ AC + N ++
Sbjct: 592 KGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACFLTNSSR 646
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 160/396 (40%), Gaps = 49/396 (12%)
Query: 152 FFKWVTSGV------VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVL-TVEILNELI 204
F K + SGV + LL+ +C KE L D V + +GVL + N I
Sbjct: 204 FGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIK-----RGVLPNLFTYNLFI 258
Query: 205 ALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL 264
+ G+ A + + G + TY I L + F A KM+ G
Sbjct: 259 QGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLE 318
Query: 265 PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALD 324
PDS +I+ +CKGG + A + A P Q LI LC E ET + AL
Sbjct: 319 PDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNR-ALA 377
Query: 325 MLDDFSG------------------------EARKYA-----------IKPFSSVIRSLC 349
+ ++ G EA + A ++ F+ ++ LC
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLC 437
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
+M V A L+ MIS+G P FN +I YS M A+E+L +M G+ PDVY
Sbjct: 438 KMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVY 497
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
TY L++G + E+ E + + T++ L+ C+ + D AL LL EM
Sbjct: 498 TYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEM 557
Query: 470 KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
K+ V P+ + LI C K D A L M
Sbjct: 558 KNKSVNPDAVTFGTLIDGFC-KNGDLDGAYTLFRKM 592
Score = 105 bits (263), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 121/283 (42%), Gaps = 1/283 (0%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
F K + AA + N GC N Y + + + KM+ +G
Sbjct: 156 FCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLC 215
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
K++ CK G KE + ++ + P I LCQ E + A+ M+
Sbjct: 216 LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGE-LDGAVRMV 274
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKA 386
+ K + ++++I LC+ A+ L KM++EG P + +N++I+ Y K
Sbjct: 275 GCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKG 334
Query: 387 GDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTY 446
G + A ++ G PD +TY L+ G + G+ A + NEA + + + Y
Sbjct: 335 GMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394
Query: 447 HTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+TLI+G A +L NEM + G+ P V +N L+ LC
Sbjct: 395 NTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLC 437
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 139/341 (40%), Gaps = 41/341 (12%)
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
+ + GK + A VF + Y C +Y + L FD A V +M + G PD
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD 145
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF------------------- 307
+ FCK + A + L +VVA+
Sbjct: 146 VYSFTIRMKSFCKTSRPHAA--LRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYEL 203
Query: 308 ------------------LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLC 349
L+ LC++ + VK +LD + ++ I+ LC
Sbjct: 204 FGKMLASGVSLCLSTFNKLLRVLCKKGD-VKECEKLLDKVIKRGVLPNLFTYNLFIQGLC 262
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
+ ++ GA ++ +I +GP P +N++I K A L M + GL+PD Y
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY 322
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
TY L++GY GG ++ A I+ +A N TY +LI G C E + AL L NE
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA 382
Query: 470 KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
G++PNV YN LI+ L + + A+ L +M KGL
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGMILEAAQ-LANEMSEKGL 422
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 125/292 (42%), Gaps = 11/292 (3%)
Query: 191 EKGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD 249
EKG++ V+ N L+ K+G A + G + T+ I S + +
Sbjct: 419 EKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKME 478
Query: 250 WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI 309
A + + M++ G PD +++ CK K ++ Y EK P L+
Sbjct: 479 NALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILL 538
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM----- 364
SLC+ + + AL +L++ ++ F ++I C+ D+ GA TL KM
Sbjct: 539 ESLCRYRK-LDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYK 597
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
+S P +N +I A+++ ++T A ++ + M R L PD YTY ++ G+ G +
Sbjct: 598 VSSSTP----TYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNV 653
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
+ L E +N S T +I C + A +++ M G+ P
Sbjct: 654 NLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVP 705
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 145/340 (42%), Gaps = 32/340 (9%)
Query: 216 AFEVFNKF-GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIET--GSLPDSEKVGK 272
A E+FN + G TY IE L F+ V M E + + VG
Sbjct: 23 ALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGA 82
Query: 273 IISWFCKGGKAKEAHVVYTLAR----EKKMYPPQSVVAFLISSLCQEDETVKLALDMLDD 328
+ ++ + GK +EA V+ E ++ ++++ L+ S D+ K+ + M
Sbjct: 83 MKNY-GRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDS-GYFDQAHKVYMRM--- 137
Query: 329 FSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
R I P F+ ++S C+ H A LL+ M S+G + +V+ +
Sbjct: 138 -----RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFY 192
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV 444
+ E+ M + G+ + T+ L+ G ++E ++L++ K +
Sbjct: 193 EENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLF 252
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLED 504
TY+ I+G C+ E D A++++ + + G +P+V YN LI LC K ++ AE L
Sbjct: 253 TYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLC-KNSKFQEAEVYLGK 311
Query: 505 MRLKGLHLNGITR----------ALIRAVKELEEDAIENG 534
M +GL + T +++ + + DA+ NG
Sbjct: 312 MVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNG 351
>sp|Q9SIC9|PP178_ARATH Pentatricopeptide repeat-containing protein At2g31400,
chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2
SV=1
Length = 918
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 157/324 (48%), Gaps = 7/324 (2%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKI-FDWAWSV 254
TV + LI+ + + G + A VFN +YG N TY I+A + + F
Sbjct: 267 TVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKF 326
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF--LISSL 312
++M G PD +++ +GG + A ++ +++ Q V ++ L+ ++
Sbjct: 327 FDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRI--EQDVFSYNTLLDAI 384
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
C+ + + LA ++L + + +S+VI + A L +M G
Sbjct: 385 CKGGQ-MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALD 443
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+N+++S Y+K G A+++L+ M S G+K DV TY L+ GY G+ +E ++
Sbjct: 444 RVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFT 503
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
E K+ H + +TY TLI GY K + A+++ E K G++ +V Y+ LI +LC
Sbjct: 504 EMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNG 563
Query: 493 LDWRTAEKLLEDMRLKGLHLNGIT 516
L +A L+++M +G+ N +T
Sbjct: 564 L-VGSAVSLIDEMTKEGISPNVVT 586
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 95/182 (52%), Gaps = 6/182 (3%)
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV--FNSVISAYSKAGDMTPAMEMLKLM 399
S++I +L R V AK + + G GN V F+++ISAY ++G A+ + M
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGY--GNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 400 RSRGLKPDVYTYTGLMSGYANGG-QMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
+ GL+P++ TY ++ GG + ++ + +E ++N + +T+++L+ +
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGL 354
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRA 518
++ A L +EM + ++ +V YN L+ ++C K A ++L M +K + N ++ +
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAIC-KGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 519 LI 520
+
Sbjct: 414 TV 415
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 87/440 (19%), Positives = 179/440 (40%), Gaps = 76/440 (17%)
Query: 145 LGENLVCFFKWVTSGVVDALLKAICSSVGK--KEVYALWDIVKEIGEKEKGVLTVEILNE 202
L NLV + + V+DA C G K+V +D ++ G + + N
Sbjct: 299 LRPNLVTY-----NAVIDA-----CGKGGMEFKQVAKFFDEMQRNGVQPDRI----TFNS 344
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
L+A+ S+ G +AA +F++ + + +Y ++A+ + D A+ + +M
Sbjct: 345 LLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKR 404
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+P+ +I F K G+ EA ++ R + + L+S + + + A
Sbjct: 405 IMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEE-A 463
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
LD+L + + K + +++++ + K + ++M E P ++++I
Sbjct: 464 LDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDG 523
Query: 383 YSKAGDMTPAMEMLKLMRSRGLK-----------------------------------PD 407
YSK G AME+ + +S GL+ P+
Sbjct: 524 YSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPN 583
Query: 408 VYTYTGLMSG------------YANGGQM---EEACEILNEAKKNH-----SRLSPVTYH 447
V TY ++ Y+NGG + A L E + N +L+ + +
Sbjct: 584 VVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNN 643
Query: 448 TLIRGYCK--LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
+ C+ ++E C L++ +M + ++PNV ++ ++ + C + + A LLE++
Sbjct: 644 RTTKD-CEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNA-CSRCNSFEDASMLLEEL 701
Query: 506 RLKGLHLNGITRALIRAVKE 525
RL + G+ L+ +E
Sbjct: 702 RLFDNKVYGVVHGLLMGQRE 721
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 60/147 (40%), Gaps = 35/147 (23%)
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
+++IS + G +T A + + + G VY ++ L+S Y G EEA
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEA--------- 287
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ + N MK+ G++PN+ YN +I + ++++
Sbjct: 288 --------------------------ISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFK 321
Query: 497 TAEKLLEDMRLKGLHLNGITRALIRAV 523
K ++M+ G+ + IT + AV
Sbjct: 322 QVAKFFDEMQRNGVQPDRITFNSLLAV 348
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 141/300 (47%), Gaps = 3/300 (1%)
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
+G+A+ EV + + G V + +Y I S + A++ ++M++ G +P
Sbjct: 307 NEGRAS-EVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTY 365
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
+I K + A ++ REK + LI+ CQ + K A + D+
Sbjct: 366 NTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKK-AFALHDEMM 424
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
+ + ++S+I LCR A L K++ +G P + N+++ + G+M
Sbjct: 425 TDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMD 484
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A +LK M + PD TY LM G G+ EEA E++ E K+ + ++Y+TLI
Sbjct: 485 RAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLI 544
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
GY K + A + +EM +G P + YN L++ L K + AE+LL +M+ +G+
Sbjct: 545 SGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLS-KNQEGELAEELLREMKSEGI 603
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 145/330 (43%), Gaps = 12/330 (3%)
Query: 189 EKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
E + V T I+ ++ KL K K + FG + TY ++ S R
Sbjct: 220 EIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIV---TYNTLVQGFSLRGRI 276
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM--YPPQSVVA 306
+ A + +M G PD + I+SW C G+A E + RE K P SV
Sbjct: 277 EGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE------VLREMKEIGLVPDSVSY 330
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
++ C + +++A D+ + ++++I L + A+ L+ ++
Sbjct: 331 NILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIRE 390
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
+G + +N +I+ Y + GD A + M + G++P +TYT L+ + E
Sbjct: 391 KGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTRE 450
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A E+ + + V +TL+ G+C + D A LL EM + + P+ YN L++
Sbjct: 451 ADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMR 510
Query: 487 SLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
LC + + A +L+ +M+ +G+ + I+
Sbjct: 511 GLCGEG-KFEEARELMGEMKRRGIKPDHIS 539
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 137/288 (47%), Gaps = 1/288 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI S G + AF ++ G V TY I L + A + ++ E
Sbjct: 331 NILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIRE 390
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G + DS +I+ +C+ G AK+A ++ + P Q LI LC++++T +
Sbjct: 391 KGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKT-R 449
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
A ++ + G+ K + ++++ C + ++ A +LL +M P + +N ++
Sbjct: 450 EADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLM 509
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
G A E++ M+ RG+KPD +Y L+SGY+ G + A + +E
Sbjct: 510 RGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFN 569
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ +TY+ L++G K +E + A +LL EMK G+ PN + +I+++
Sbjct: 570 PTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAM 617
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 115/248 (46%), Gaps = 5/248 (2%)
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
++ C+ EA + L +EK YP +++ L + + + D + E
Sbjct: 161 LVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRME 220
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
K + F+ +I LC+ + AK L M G P +N+++ +S G + A
Sbjct: 221 I-KSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGA 279
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
++ M+S+G +PD+ TY ++S N G+ A E+L E K+ V+Y+ LIRG
Sbjct: 280 RLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRG 336
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
+ + A +EM G+ P YN LI L ++ AE L+ ++R KG+ L
Sbjct: 337 CSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMEN-KIEAAEILIREIREKGIVL 395
Query: 513 NGITRALI 520
+ +T ++
Sbjct: 396 DSVTYNIL 403
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 18/246 (7%)
Query: 183 IVKEIGEKEKG-VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEA 241
+++EI +EKG VL N LI + + G K AF + ++ G Q TY I
Sbjct: 384 LIREI--REKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYV 441
Query: 242 LSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMY-- 299
L R+ A + EK++ G PD + ++ C G A ++L +E M
Sbjct: 442 LCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRA---FSLLKEMDMMSI 498
Query: 300 -PPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDV 354
P L+ LC E + + + GE ++ IKP ++++I + D
Sbjct: 499 NPDDVTYNCLMRGLCGEGK-----FEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDT 553
Query: 355 HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
A + +M+S G P +N+++ SK + A E+L+ M+S G+ P+ ++ +
Sbjct: 554 KHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSV 613
Query: 415 MSGYAN 420
+ +N
Sbjct: 614 IEAMSN 619
>sp|Q9FNL2|PP418_ARATH Pentatricopeptide repeat-containing protein At5g46100
OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1
Length = 472
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 146/326 (44%), Gaps = 36/326 (11%)
Query: 191 EKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDW 250
E V++ +IL + + ++ + + VF+K D+ C +Q+ Y + L +
Sbjct: 80 ENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNL 139
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A+ + M E G LP P + + LI
Sbjct: 140 AFKFYKNMREIG-LP----------------------------------PTVASLNVLIK 164
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPP 370
+LC+ D TV L + + + ++I LCR + AK L ++M+ +
Sbjct: 165 ALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCA 224
Query: 371 PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
P + S+I+ + ++ AM L+ M+S+G++P+V+TY+ LM G G+ +A E+
Sbjct: 225 PTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMEL 284
Query: 431 LNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
R + VTY TLI G CK ++ A++LL+ M G++P+ Y K+I C
Sbjct: 285 FEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCA 344
Query: 491 KALDWRTAEKLLEDMRLKGLHLNGIT 516
+ +R A L++M L G+ N +T
Sbjct: 345 IS-KFREAANFLDEMILGGITPNRLT 369
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 137/340 (40%), Gaps = 22/340 (6%)
Query: 178 YALWDIVKEIGEKEKGVLTVEILNELI-ALFSKLGKGKAAFEVFNKFGDYGCVANQETYY 236
+ + ++EIG TV LN LI AL G A ++F + GC + TY
Sbjct: 141 FKFYKNMREIGLPP----TVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYG 196
Query: 237 FTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREK 296
I L R D A + +M+E P +I+ C EA + K
Sbjct: 197 TLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSK 256
Query: 297 KMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHG 356
+ P + L+ LC++ +++ A+++ + + + ++++I LC+ + +
Sbjct: 257 GIEPNVFTYSSLMDGLCKDGRSLQ-AMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQE 315
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT---- 412
A LL +M +G P ++ VIS + A L M G+ P+ T+
Sbjct: 316 AVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVK 375
Query: 413 -------GLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
GL + Y + A + + + T +L++ CK EF A++L
Sbjct: 376 TSNEVVRGLCANYPS-----RAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQL 430
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
++E+ G P+ + LI K + ++ LL D+
Sbjct: 431 VDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASDTLLRDL 470
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 186/427 (43%), Gaps = 15/427 (3%)
Query: 101 GDKLENVLSLLQSSVD-GYLESSLDSFELDLHEDFVLKVLETPLVLGENLV---CFFKWV 156
G ++ + ++L+ V+ GY ++ +F +H F+ + L + +V C V
Sbjct: 93 GKRISDAVALVDQMVEMGYRPDTI-TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV 151
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA 216
T GVV + +C + ++ ++++ ++ E K V I N +I K A
Sbjct: 152 TYGVV---VNGLCK---RGDIDLAFNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDA 204
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
+F + G N TY I L + A + MIE P+ +I
Sbjct: 205 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 264
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKY 336
F K GK EA ++ ++ + P LI+ C D K A M + +
Sbjct: 265 FVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK-AKQMFEFMVSKDCFP 323
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ ++++I+ C+ K V L +M G + ++I GD A ++
Sbjct: 324 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 383
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
K M S G+ PD+ TY+ L+ G N G++E+A E+ + +K+ +L Y T+I G CK
Sbjct: 384 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 443
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG-LHLNGI 515
+ D L + GV+PNV YN +I LC K L + A LL+ M+ G L +G
Sbjct: 444 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL-LQEAYALLKKMKEDGPLPDSGT 502
Query: 516 TRALIRA 522
LIRA
Sbjct: 503 YNTLIRA 509
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 134/291 (46%), Gaps = 1/291 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N+L++ +K+ K + K G N TY I RR A ++ KM+
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G P + +++ +C G + +A + E P LI L ++
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
+ A+ ++D + + + V+ LC+ D+ A LL+KM + +FN++
Sbjct: 133 E-AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 191
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I + K + A+ + K M ++G++P+V TY+ L+S + G+ +A ++L++ +
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
+ VT++ LI + K +F A KL ++M + P++ YN LI C+
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCM 302
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 133/273 (48%), Gaps = 10/273 (3%)
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA-REKKMYPPQSVVAF--LISSLCQ 314
M+++ LP + K++S K K+ +V +L + +++ ++ + LI+ C+
Sbjct: 1 MVKSRPLPSIFEFNKLLSAI---AKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCR 57
Query: 315 EDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
+ + LAL +L + +I SS++ C K + A L+ +M+ G P
Sbjct: 58 RSQ-ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 116
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
F ++I + A+ ++ M RG +P++ TY +++G G ++ A +LN+
Sbjct: 117 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 176
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
+ V ++T+I CK D AL L EM+ G++PNV Y+ LI LC
Sbjct: 177 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG-R 235
Query: 495 WRTAEKLLEDMRLKGLHLNGIT-RALIRA-VKE 525
W A +LL DM K ++ N +T ALI A VKE
Sbjct: 236 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 268
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 109/231 (47%), Gaps = 2/231 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
++ N LI F K + + E+F + G V + TY I+ L D A V +
Sbjct: 325 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 384
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M+ G PD ++ C GK ++A V+ ++ ++ + +I +C+
Sbjct: 385 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 444
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ V D+ S + K + ++++I LC + + A LL KM +GP P + +
Sbjct: 445 K-VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTY 503
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
N++I A+ + GD + E+++ MRS D T GL++ + G+++++
Sbjct: 504 NTLIRAHLRDGDKAASAELIREMRSCRFVGDAST-IGLVANMLHDGRLDKS 553
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/303 (19%), Positives = 122/303 (40%), Gaps = 36/303 (11%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI+ G+ A ++ + + N T+ I+A + F A + + MI+
Sbjct: 226 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 285
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD +I+ FC + +A ++ K +P LI C+ + V+
Sbjct: 286 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKS-KRVEDG 344
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++ + S ++++I+ L D A+ + +M+S+G PP ++ ++
Sbjct: 345 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 404
Query: 383 YSKAGDMTPAMEMLKLMRS-----------------------------------RGLKPD 407
G + A+E+ M+ +G+KP+
Sbjct: 405 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 464
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
V TY ++SG + ++EA +L + K++ TY+TLIR + + + + +L+
Sbjct: 465 VVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIR 524
Query: 468 EMK 470
EM+
Sbjct: 525 EMR 527
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 7/164 (4%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
LL +C++ ++ ++D + +K + L + I +I K GK +++F
Sbjct: 401 LLDGLCNNGKLEKALEVFDYM----QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 456
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK-GGK 282
G N TY I L +++ A+++ +KM E G LPDS +I + G K
Sbjct: 457 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDK 516
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
A A ++ + R + S + L++++ + K LDML
Sbjct: 517 AASAELIREM-RSCRFVGDASTIG-LVANMLHDGRLDKSFLDML 558
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 141/327 (43%), Gaps = 3/327 (0%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V I N +I K A +F + G N TY I L + A +
Sbjct: 260 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 319
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
MIE P+ +I F K GK EA +Y ++ + P L++ C D
Sbjct: 320 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHD 379
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
K A M + + + ++++I+ C+ K V L +M G +
Sbjct: 380 RLDK-AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 438
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
++I GD A ++ K M S G+ PD+ TY+ L+ G N G++E+A E+ + +K
Sbjct: 439 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 498
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ +L Y T+I G CK + D L + GV+PNV YN +I LC K L +
Sbjct: 499 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL-LQ 557
Query: 497 TAEKLLEDMRLKG-LHLNGITRALIRA 522
A LL+ M+ G L +G LIRA
Sbjct: 558 EAYALLKKMKEDGPLPNSGTYNTLIRA 584
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 134/283 (47%), Gaps = 10/283 (3%)
Query: 248 FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA-REKKMYPPQSVVA 306
D A + M+++ LP + K++S K K+ VV +L + +++ +
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAI---AKMKKFDVVISLGEKMQRLEIVHGLYT 122
Query: 307 F--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM 364
+ LI+ C+ + + LAL +L + +I SS++ C K + A L+ +M
Sbjct: 123 YNILINCFCRRSQ-ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
+ G P F ++I + A+ ++ M RG +P++ TY +++G G
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
+ A +LN+ + V ++T+I CK D AL L EM+ G++PNV Y+ L
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 485 IQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRA-VKE 525
I LC W A +LL DM K ++ N +T ALI A VKE
Sbjct: 302 ISCLCSYG-RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 343
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 132/291 (45%), Gaps = 1/291 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N+L++ +K+ K + K V TY I RR A ++ KM+
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G P + +++ +C G + +A + E P LI L ++
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
+ A+ ++D + + + V+ LC+ D A LL+KM + +FN++
Sbjct: 208 E-AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 266
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I + K + A+ + K M ++G++P+V TY+ L+S + G+ +A ++L++ +
Sbjct: 267 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 326
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
+ VT++ LI + K +F A KL ++M + P++ YN L+ C+
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCM 377
Score = 79.0 bits (193), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 107/227 (47%), Gaps = 2/227 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI F K + + E+F + G V + TY I+ L D A V ++M+
Sbjct: 404 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 463
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G PD ++ C GK ++A V+ ++ ++ + +I +C+ + V
Sbjct: 464 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK-VD 522
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
D+ S + K + ++++I LC + + A LL KM +GP P + +N++I
Sbjct: 523 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
A+ + GD + E+++ MRS D T GL++ + G+++++
Sbjct: 583 RAHLRDGDKAASAELIREMRSCRFVGDAST-IGLVANMLHDGRLDKS 628
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/303 (19%), Positives = 123/303 (40%), Gaps = 36/303 (11%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI+ G+ A ++ + + N T+ I+A + F A + + MI+
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD +++ FC + +A ++ K +P LI C+ + V+
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKS-KRVEDG 419
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++ + S ++++I+ L D A+ + +M+S+G PP ++ ++
Sbjct: 420 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Query: 383 YSKAGDMTPAMEMLKLMRS-----------------------------------RGLKPD 407
G + A+E+ M+ +G+KP+
Sbjct: 480 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 539
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
V TY ++SG + ++EA +L + K++ + TY+TLIR + + + + +L+
Sbjct: 540 VVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIR 599
Query: 468 EMK 470
EM+
Sbjct: 600 EMR 602
Score = 41.6 bits (96), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 7/164 (4%)
Query: 164 LLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKF 223
LL +C++ ++ ++D + +K + L + I +I K GK +++F
Sbjct: 476 LLDGLCNNGKLEKALEVFDYM----QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 531
Query: 224 GDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK-GGK 282
G N TY I L +++ A+++ +KM E G LP+S +I + G K
Sbjct: 532 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDK 591
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
A A ++ + R + S + L++++ + K LDML
Sbjct: 592 AASAELIREM-RSCRFVGDASTIG-LVANMLHDGRLDKSFLDML 633
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 139/321 (43%), Gaps = 3/321 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I K G AF +FN+ G A+ Y I +D + MI+
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD +I F K GK +EA ++ ++ + P LI C+E++ K A
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDK-A 371
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
MLD + I+ F+ +I C+ + L KM G +N++I
Sbjct: 372 NHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQG 431
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ + G + A E+ + M SR ++PD+ +Y L+ G + G+ E+A EI + +K+ L
Sbjct: 432 FCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELD 491
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
Y+ +I G C + D A L + GV+P+V YN +I LC K A+ L
Sbjct: 492 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKG-SLSEADLLF 550
Query: 503 EDMRLKGLHLNGIT-RALIRA 522
M G NG T LIRA
Sbjct: 551 RKMEEDGHSPNGCTYNILIRA 571
Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 142/334 (42%), Gaps = 19/334 (5%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
L+ +C E L D + E+G K T+ LN L+ GK A + ++
Sbjct: 147 TLINGLCLEGRVSEALELVDRMVEMGHKP----TLITLNALVNGLCLNGKVSDAVLLIDR 202
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
+ G N+ TY ++ + + A + KM E D+ K II CK G
Sbjct: 203 MVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGS 262
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLC---QEDETVKLALDMLDDFSGEARKYAIK 339
A ++ K + LI C + D+ KL DM+ K I
Sbjct: 263 LDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI--------KRKIT 314
Query: 340 P----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
P FS++I + + A+ L +MI G P + S+I + K + A M
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM 374
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
L LM S+G P++ T+ L++GY +++ E+ + VTY+TLI+G+C+
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 434
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
L + + A +L EM V+P++ Y L+ LC
Sbjct: 435 LGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC 468
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 136/312 (43%), Gaps = 3/312 (0%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
AF K G + T+ I L A + ++M+E G P + +++
Sbjct: 126 AFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVN 185
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
C GK +A ++ E P + ++ +C+ +T LA+++L K
Sbjct: 186 GLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA-LAMELLRKMEERKIK 244
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+S +I LC+ + A L ++M +G ++ ++I + AG ++
Sbjct: 245 LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKL 304
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
L+ M R + PDV ++ L+ + G++ EA E+ E + VTY +LI G+CK
Sbjct: 305 LRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCK 364
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
+ D A +L+ M G PN+ +N LI C KA +L M L+G+ + +
Sbjct: 365 ENQLDKANHMLDLMVSKGCGPNIRTFNILINGYC-KANLIDDGLELFRKMSLRGVVADTV 423
Query: 516 T-RALIRAVKEL 526
T LI+ EL
Sbjct: 424 TYNTLIQGFCEL 435
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 98/203 (48%), Gaps = 2/203 (0%)
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
L LD+ + + + S +I CR + + A + + K+I G P F+++I
Sbjct: 90 LVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLI 149
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
+ G ++ A+E++ M G KP + T L++G G++ +A +++ + +
Sbjct: 150 NGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQ 209
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+ VTY +++ CK + A++LL +M++ ++ + +Y+ +I LC K A
Sbjct: 210 PNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC-KDGSLDNAFN 268
Query: 501 LLEDMRLKGLHLNGIT-RALIRA 522
L +M +KG + I LIR
Sbjct: 269 LFNEMEIKGFKADIIIYTTLIRG 291
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 93/226 (41%), Gaps = 1/226 (0%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
+ N LI + K E+F K G VA+ TY I+ + A +
Sbjct: 386 NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELF 445
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
++M+ PD ++ C G+ ++A ++ + KM + +I +C
Sbjct: 446 QEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 505
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
+ V A D+ + K +K ++ +I LC+ + A L KM +G P
Sbjct: 506 SK-VDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCT 564
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANG 421
+N +I A+ GD T + ++++ ++ G D T ++ ++G
Sbjct: 565 YNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDG 610
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 111/271 (40%), Gaps = 1/271 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F K GK + A E+ + G + TY I+ + D A + + M+ G
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P+ +I+ +CK + ++ + + LI C+ + +++A
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK-LEVA 441
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++ + + I + ++ LC + A + K+ ++N +I
Sbjct: 442 KELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHG 501
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
A + A ++ + +G+KPDV TY ++ G G + EA + + +++ +
Sbjct: 502 MCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPN 561
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVG 473
TY+ LIR + + + KL+ E+K G
Sbjct: 562 GCTYNILIRAHLGEGDATKSAKLIEEIKRCG 592
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 92/199 (46%), Gaps = 1/199 (0%)
Query: 322 ALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
A+D+ + + + + FS + + R K L +M +G + +I+
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 382 AYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRL 441
+ ++ A + + G +PD T++ L++G G++ EA E+++ + +
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 442 SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKL 501
+ +T + L+ G C + A+ L++ M + G QPN Y +++ +C K+ A +L
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMC-KSGQTALAMEL 234
Query: 502 LEDMRLKGLHLNGITRALI 520
L M + + L+ + ++I
Sbjct: 235 LRKMEERKIKLDAVKYSII 253
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 150/324 (46%), Gaps = 8/324 (2%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
LN L+ F + A + ++ + G + T+ I L A ++ ++M+
Sbjct: 151 LNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMV 210
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ---ED 316
+ G PD G +++ CK G A + K+ + + +I SLC+ ED
Sbjct: 211 QRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 270
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ AL++ + + + + +SS+I LC A LLS MI P F
Sbjct: 271 D----ALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTF 326
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
+++I A+ K G + A ++ + M R + P+++TY+ L++G+ ++ EA ++L +
Sbjct: 327 SALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIR 386
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ VTY+TLI G+CK + D ++L EM G+ N Y LI +A D
Sbjct: 387 KDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGF-FQARDCD 445
Query: 497 TAEKLLEDMRLKGLHLNGITRALI 520
A+ + + M G+H N +T ++
Sbjct: 446 NAQMVFKQMVSVGVHPNILTYNIL 469
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 145/325 (44%), Gaps = 14/325 (4%)
Query: 176 EVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETY 235
E AL D + + G + V ++N L K G A + NK AN Y
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGL----CKRGDTDLALNLLNKMEAAKIEANVVIY 256
Query: 236 YFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE 295
I++L + + D A ++ +M G P+ +IS C G+ +A + + E
Sbjct: 257 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIE 316
Query: 296 KKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRM 351
+K+ P + LI + ++ + VK + E K +I P +SS+I C +
Sbjct: 317 RKINPNLVTFSALIDAFVKKGKLVKA-----EKLYEEMIKRSIDPNIFTYSSLINGFCML 371
Query: 352 KDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTY 411
+ AK +L MI + P +N++I+ + KA + ME+ + M RGL + TY
Sbjct: 372 DRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTY 431
Query: 412 TGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKD 471
T L+ G+ + A + + + +TY+ L+ G CK + A+ + ++
Sbjct: 432 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 491
Query: 472 VGVQPNVDEYNKLIQSLCLKALDWR 496
++P++ YN +I+ +C KA W+
Sbjct: 492 STMEPDIYTYNIMIEGMC-KAGKWK 515
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 150/356 (42%), Gaps = 45/356 (12%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGD----YGCVANQETYYFTIEALSRRKIFDWAWSVC 255
++L++ +K+ K F++ FG+ G N TY I R A ++
Sbjct: 81 FSKLLSAIAKMNK----FDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALL 136
Query: 256 EKMIETGSLPDSEKVGKIISWFCKG----------------------------------- 280
KM++ G PD + +++ FC G
Sbjct: 137 GKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLH 196
Query: 281 GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP 340
KA EA + ++ P +++ LC+ +T LAL++L+ + +
Sbjct: 197 NKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDT-DLALNLLNKMEAAKIEANVVI 255
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+S+VI SLC+ + A L ++M ++G P ++S+IS G + A +L M
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
R + P++ T++ L+ + G++ +A ++ E K + TY +LI G+C L+
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
A ++L M PNV YN LI C KA +L +M +GL N +T
Sbjct: 376 EAKQMLELMIRKDCLPNVVTYNTLINGFC-KAKRVDKGMELFREMSQRGLVGNTVT 430
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
I +S++ C + A L+ +M+ G P F ++I + A+ ++
Sbjct: 148 IVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALID 207
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M RG +PD+ TY +++G G + A +LN+ + + V Y T+I CK
Sbjct: 208 RMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYR 267
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT- 516
D AL L EM++ GV+PNV Y+ LI LC W A +LL DM + ++ N +T
Sbjct: 268 HEDDALNLFTEMENKGVRPNVITYSSLISCLCNYG-RWSDASRLLSDMIERKINPNLVTF 326
Query: 517 RALIRA 522
ALI A
Sbjct: 327 SALIDA 332
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 154/348 (44%), Gaps = 19/348 (5%)
Query: 190 KEKGVLTVEILNELIALFSKLGKGKAAF-----------------EVFNKFGDYGCVANQ 232
+ GV +EI+N L + FS G + F E F G +
Sbjct: 141 RRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSI 200
Query: 233 ETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTL 292
+ I +L R + AW V +++ +G + + +++ CK GK ++ +
Sbjct: 201 DACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQ 260
Query: 293 AREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMK 352
+EK +YP LIS+ + ++ A ++++ G+ + +++VI LC+
Sbjct: 261 VQEKGVYPDIVTYNTLISAYSSKG-LMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHG 319
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT 412
AK + ++M+ G P + + S++ K GD+ ++ MRSR + PD+ ++
Sbjct: 320 KYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFS 379
Query: 413 GLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
+MS + G +++A N K+ V Y LI+GYC+ A+ L NEM
Sbjct: 380 SMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQ 439
Query: 473 GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
G +V YN ++ LC + + A+KL +M + L + T ++
Sbjct: 440 GCAMDVVTYNTILHGLCKRKM-LGEADKLFNEMTERALFPDSYTLTIL 486
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 139/308 (45%), Gaps = 10/308 (3%)
Query: 190 KEKGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
+EKGV + N LI+ +S G + AFE+ N G TY I L + +
Sbjct: 262 QEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKY 321
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFL 308
+ A V +M+ +G PDS ++ CK G E V++ R + + P + +
Sbjct: 322 ERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSM 381
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKM 364
+S + LD + ++ + P ++ +I+ CR + A L ++M
Sbjct: 382 MSLFTRSGN-----LDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEM 436
Query: 365 ISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQM 424
+ +G +N+++ K + A ++ M R L PD YT T L+ G+ G +
Sbjct: 437 LQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNL 496
Query: 425 EEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKL 484
+ A E+ + K+ RL VTY+TL+ G+ K+ + D A ++ +M + P Y+ L
Sbjct: 497 QNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSIL 556
Query: 485 IQSLCLKA 492
+ +LC K
Sbjct: 557 VNALCSKG 564
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 137/326 (42%), Gaps = 39/326 (11%)
Query: 190 KEKGVLTVEILNE-LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIF 248
KE G++ ++ LI + + G A + N+ GC + TY + L +RK+
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461
Query: 249 DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM---------- 298
A + +M E PDS + +I CK G + A ++ +EK++
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTL 521
Query: 299 -------------------------YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEA 333
P + L+++LC + + A + D+ +
Sbjct: 522 LDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAE-AFRVWDEMISKN 580
Query: 334 RKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAM 393
K + +S+I+ CR + ++ L KMISEG P +N++I + + +M+ A
Sbjct: 581 IKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAF 640
Query: 394 EMLKLMRSR--GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIR 451
++K M GL PDV+TY ++ G+ QM+EA +L + + TY +I
Sbjct: 641 GLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMIN 700
Query: 452 GYCKLEEFDCALKLLNEMKDVGVQPN 477
G+ + A ++ +EM G P+
Sbjct: 701 GFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 89.4 bits (220), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 136/325 (41%), Gaps = 36/325 (11%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
+ +++LF++ G A FN + G + + Y I+ R+ + A ++ +M+
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML 437
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC------ 313
+ G D I+ CK EA ++ E+ ++P + LI C
Sbjct: 438 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQ 497
Query: 314 ------QEDETVKLALD------MLDDFS------------GEARKYAIKP----FSSVI 345
Q+ + ++ LD +LD F + I P +S ++
Sbjct: 498 NAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILV 557
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
+LC + A + +MIS+ P + NS+I Y ++G+ + L+ M S G
Sbjct: 558 NALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV 617
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCAL 463
PD +Y L+ G+ M +A ++ + ++ L P TY++++ G+C+ + A
Sbjct: 618 PDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAE 677
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSL 488
+L +M + GV P+ Y +I
Sbjct: 678 VVLRKMIERGVNPDRSTYTCMINGF 702
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 65/158 (41%), Gaps = 10/158 (6%)
Query: 164 LLKAICSSVGKKEVYALWD--IVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFN 221
L+ A+CS E + +WD I K I TV I N +I + + G
Sbjct: 556 LVNALCSKGHLAEAFRVWDEMISKNIKP------TVMICNSMIKGYCRSGNASDGESFLE 609
Query: 222 KFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE--TGSLPDSEKVGKIISWFCK 279
K G V + +Y I R + A+ + +KM E G +PD I+ FC+
Sbjct: 610 KMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCR 669
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
+ KEA VV E+ + P +S +I+ +D
Sbjct: 670 QNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDN 707
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 105/274 (38%), Gaps = 58/274 (21%)
Query: 301 PQSVVAFLISSLCQEDETV-KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKT 359
P +VV L C+ D T+ + +D L F K+ S++I L R + A++
Sbjct: 78 PLAVVEVLYR--CRNDLTLGQRFVDQLG-FHFPNFKHTSLSLSAMIHILVRSGRLSDAQS 134
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGD-----------------MTPAMEMLKLMRSR 402
L +MI + NS+ S +S G + A E L+RS+
Sbjct: 135 CLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSK 194
Query: 403 GLKP-----------------------------------DVYTYTGLMSGYANGGQMEEA 427
G +VYT +++ G+ME+
Sbjct: 195 GFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKV 254
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
L++ ++ VTY+TLI Y + A +L+N M G P V YN +I
Sbjct: 255 GTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVING 314
Query: 488 LCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALI 520
LC K + A+++ +M GL + T R+L+
Sbjct: 315 LC-KHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 146/321 (45%), Gaps = 2/321 (0%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
++ LN L+ F + A + ++ + G + T+ + L + A ++
Sbjct: 134 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 193
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
E+M+ G PD G +I+ CK G+ A + + K+ + + +I SLC+
Sbjct: 194 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKY 253
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
V AL++ + + + + +SS+I LC A LLS M+ P
Sbjct: 254 -RHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVT 312
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
FNS+I A++K G + A ++ M R + P++ TY L++G+ +++EA +I
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV 372
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
VTY+TLI G+CK ++ ++L +M G+ N Y LI +A D
Sbjct: 373 SKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF-FQASDC 431
Query: 496 RTAEKLLEDMRLKGLHLNGIT 516
A+ + + M G+H N +T
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMT 452
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 153/353 (43%), Gaps = 40/353 (11%)
Query: 202 ELIALFSKLGKGKAAFEVFNKFGD----YGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
E L S + K K F++ FG+ G N TY I L RR +A ++ K
Sbjct: 67 EFSKLLSAIAKMKK-FDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGK 125
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEA--------------------HVVYTLAREKK 297
M++ G P + +++ FC G + EA +V+ L + K
Sbjct: 126 MMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNK 185
Query: 298 MYPPQSVVAFLISSLCQEDETV--------------KLALDMLDDFSGEARKYAIKPFSS 343
++V ++ CQ D LAL++L+ + + +S+
Sbjct: 186 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYST 245
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
VI SLC+ + V A L ++M ++G P ++S+IS G + A +L M R
Sbjct: 246 VIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK 305
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
+ P+V T+ L+ +A G++ EA ++ +E + + VTY++LI G+C + D A
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQ 365
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++ M P+V YN LI C KA +L DM +GL N +T
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFC-KAKKVVDGMELFRDMSRRGLVGNTVT 417
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 147/337 (43%), Gaps = 21/337 (6%)
Query: 161 VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVF 220
+++LL C E AL D + E+G + V +++ L + K A +
Sbjct: 138 LNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF----QHNKASEAVALV 193
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL-PDSEKVGKIISWFCK 279
+ GC + TY I L +R D A ++ KM E G + D +I CK
Sbjct: 194 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM-EKGKIEADVVIYSTVIDSLCK 252
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKY 336
+A ++T K + P + LIS LC + +L DML+ RK
Sbjct: 253 YRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLE------RK- 305
Query: 337 AIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
I P F+S+I + + + A+ L +MI P +NS+I+ + + A
Sbjct: 306 -INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEA 364
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
++ LM S+ PDV TY L++G+ ++ + E+ + + + VTY TLI G
Sbjct: 365 QQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHG 424
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + + D A + +M GV PN+ YN L+ LC
Sbjct: 425 FFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 461
Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 129/276 (46%), Gaps = 2/276 (0%)
Query: 231 NQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVY 290
N T+ I+A ++ A + ++MI+ P+ +I+ FC + EA ++
Sbjct: 309 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 368
Query: 291 TLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCR 350
TL K P LI+ C+ + V +++ D S ++++I +
Sbjct: 369 TLMVSKDCLPDVVTYNTLINGFCKAKKVVD-GMELFRDMSRRGLVGNTVTYTTLIHGFFQ 427
Query: 351 MKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYT 410
D A+ + +M+S+G P +N+++ K G + AM + + ++ ++PD+YT
Sbjct: 428 ASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYT 487
Query: 411 YTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
Y + G G++E+ ++ + + Y+T+I G+CK + A L +MK
Sbjct: 488 YNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMK 547
Query: 471 DVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
+ G P+ YN LI++ L+ D + +L+++MR
Sbjct: 548 EDGPLPDSGTYNTLIRAH-LRDGDKAASAELIKEMR 582
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 133/291 (45%), Gaps = 13/291 (4%)
Query: 240 EALSRRKIF----DWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE 295
E LSR + D A + +M+++ P + K++S K K+ +V + +
Sbjct: 34 EKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAI---AKMKKFDLVISFGEK 90
Query: 296 KKMYPPQS---VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMK 352
++ +I+ LC+ + + AL +L +I +S++ C
Sbjct: 91 MEILGVSHNLYTYNIMINCLCRRSQ-LSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGN 149
Query: 353 DVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYT 412
+ A L+ +M+ G P F +++ + + A+ +++ M +G +PD+ TY
Sbjct: 150 RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG 209
Query: 413 GLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDV 472
+++G G+ + A +LN+ +K V Y T+I CK D AL L EM +
Sbjct: 210 AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK 269
Query: 473 GVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRA 522
G++P+V Y+ LI LC W A +LL DM + ++ N +T +LI A
Sbjct: 270 GIRPDVFTYSSLISCLCNYG-RWSDASRLLSDMLERKINPNVVTFNSLIDA 319
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 112 bits (280), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 163/344 (47%), Gaps = 5/344 (1%)
Query: 199 ILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKM 258
I N LI K G ++ + GCV N+ TY I L + D A S+ E+M
Sbjct: 259 IYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERM 318
Query: 259 IETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDET 318
+ + +P+ G +I+ K +A +A + + E+ + Q + + LIS L +E +
Sbjct: 319 VSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKA 378
Query: 319 VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNS 378
+ A+ + + + K I +S ++ LCR + AK +L++MI+ G P ++S
Sbjct: 379 EE-AMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSS 437
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
++ + K G A+++ K M G + + Y+ L+ G G+++EA + ++
Sbjct: 438 LMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIG 497
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEM---KDVGVQPNVDEYNKLIQSLCLKALDW 495
+ V Y ++I+G C + D ALKL +EM ++ QP+V YN L+ LC++ D
Sbjct: 498 IKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQK-DI 556
Query: 496 RTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDAIENGEALVE 539
A LL M +G + IT + ++ + G + +E
Sbjct: 557 SRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLE 600
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 92/195 (47%), Gaps = 10/195 (5%)
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGA----KTLLSKMISEGPPP 371
D+ V L M+D+F K ++K F+SV+ + H +++ ++ P
Sbjct: 129 DKAVDLFHRMVDEFRC---KRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISP 185
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
FN VI A K + A+E+ + M R PD YTY LM G +++EA +L
Sbjct: 186 NGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLL 245
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
+E + SPV Y+ LI G CK + KL++ M G PN YN LI LCLK
Sbjct: 246 DEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLK 305
Query: 492 A-LDWRTAEKLLEDM 505
LD A LLE M
Sbjct: 306 GKLD--KAVSLLERM 318
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 130/302 (43%), Gaps = 11/302 (3%)
Query: 197 VEILNELIALFSKLGKGK---AAFEVFNKFGD-YGCVANQETYYFTI-----EALSRRKI 247
V I I +F GK A ++F++ D + C + +++ + E L R +
Sbjct: 109 VIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGL 168
Query: 248 FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAF 307
+ + V M S P+ +I CK A V+ E+K P
Sbjct: 169 EFYDYVVNSNMNMNIS-PNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCT 227
Query: 308 LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
L+ LC+E E + A+ +LD+ E + ++ +I LC+ D+ L+ M +
Sbjct: 228 LMDGLCKE-ERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLK 286
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P +N++I G + A+ +L+ M S P+ TY L++G + +A
Sbjct: 287 GCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDA 346
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
+L+ ++ L+ Y LI G K + + A+ L +M + G +PN+ Y+ L+
Sbjct: 347 VRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDG 406
Query: 488 LC 489
LC
Sbjct: 407 LC 408
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 83/216 (38%), Gaps = 41/216 (18%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM- 399
SS+I S D + LLS++ E F V AY KA A+++ M
Sbjct: 80 LSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMV 139
Query: 400 ------RS------------------RGLK---------------PDVYTYTGLMSGYAN 420
RS RGL+ P+ ++ ++
Sbjct: 140 DEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCK 199
Query: 421 GGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDE 480
++ A E+ + TY TL+ G CK E D A+ LL+EM+ G P+
Sbjct: 200 LRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVI 259
Query: 481 YNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
YN LI LC K D KL+++M LKG N +T
Sbjct: 260 YNVLIDGLCKKG-DLTRVTKLVDNMFLKGCVPNEVT 294
>sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890
OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1
Length = 701
Score = 112 bits (279), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 151/326 (46%), Gaps = 7/326 (2%)
Query: 198 EILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK 257
E++ ++ FS++G+ A + + G + T +E + ++A +V ++
Sbjct: 148 EVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDE 207
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M G +PDS ++ + GK +EA T ++ P + ++++LC E+
Sbjct: 208 MSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALC-ENG 266
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
V A+ K + F+S+I LC+ + A +L +M+ G P
Sbjct: 267 LVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHT 326
Query: 378 SVISAYSKAGDMTPAMEM-LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
++I K G A + LKL+RS KP+V+TYT ++ GY ++ A + + K+
Sbjct: 327 ALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKE 386
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ TY TLI G+CK F A +L+N M D G PN+ YN I SLC K+ R
Sbjct: 387 QGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKS---R 443
Query: 497 TAE--KLLEDMRLKGLHLNGITRALI 520
E +LL GL +G+T ++
Sbjct: 444 APEAYELLNKAFSCGLEADGVTYTIL 469
Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 110/263 (41%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G + + T + AL + + A KMI+ G P+ +I CK G K+A
Sbjct: 247 GFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQA 306
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
+ P LI LC+ T K L + K + ++S+I
Sbjct: 307 FEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIG 366
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
C+ ++ A+ L S+M +G P + ++I+ + KAG A E++ LM G P
Sbjct: 367 GYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMP 426
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
++YTY + + EA E+LN+A VTY LI+ CK + + AL
Sbjct: 427 NIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFF 486
Query: 467 NEMKDVGVQPNVDEYNKLIQSLC 489
M G + ++ N LI + C
Sbjct: 487 CRMNKTGFEADMRLNNILIAAFC 509
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 129/312 (41%), Gaps = 35/312 (11%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
LI K G K AFE+ + G N T+ I+ L +R + A+ + K++
Sbjct: 290 FTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLV 349
Query: 260 ETGSL-PDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE--- 315
+ + P+ +I +CK K A ++++ +E+ ++P + LI+ C+
Sbjct: 350 RSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSF 409
Query: 316 -----------DE-------TVKLALDMLDDFSGEARKYAI--KPFSS-----------V 344
DE T A+D L S Y + K FS +
Sbjct: 410 GRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTIL 469
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
I+ C+ D++ A +M G + N +I+A+ + M + + +L+ S GL
Sbjct: 470 IQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGL 529
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
P TYT ++S Y G ++ A + + K++ TY +LI G CK D A K
Sbjct: 530 IPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACK 589
Query: 465 LLNEMKDVGVQP 476
L M D G+ P
Sbjct: 590 LYEAMIDRGLSP 601
>sp|Q94JX6|PP391_ARATH Pentatricopeptide repeat-containing protein At5g18390,
mitochondrial OS=Arabidopsis thaliana GN=At5g18390 PE=2
SV=2
Length = 459
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 186/440 (42%), Gaps = 59/440 (13%)
Query: 104 LENVLSLLQSSVDGYLESSLDSFELDLHEDFVLKVLETPLVLGENLVCFFKWV------- 156
+ +V+++++ + + E SL+S L + +FV +VL + + FF W
Sbjct: 51 INHVVNIVRREI--HPERSLNSLRLPVTSEFVFRVLRATSRSSNDSLRFFNWARSNPSYT 108
Query: 157 -TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKA 215
TS + L K++ S K+ ++W I+K++ + + + E L +I + K G
Sbjct: 109 PTSMEYEELAKSLAS---HKKYESMWKILKQMKDLSLDI-SGETLCFIIEQYGKNGHVDQ 164
Query: 216 AFEVFNKFGD-YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
A E+FN GC + Y + AL K+F A+++ +MI G PD ++
Sbjct: 165 AVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILV 224
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR 334
+ +C GK KEA + LD+ S
Sbjct: 225 NGWCSAGKMKEAQ------------------------------------EFLDEMSRRGF 248
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
+ +I L + AK ++SKM G P FN +I A SK+G++ +E
Sbjct: 249 NPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIE 308
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
M GL D+ TY L+ + G+++EA +LN ++ + P Y +I+G C
Sbjct: 309 MYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMC 368
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNG 514
+ FD A ++MK PN Y LI ++C + + A L +M G L
Sbjct: 369 RNGMFDDAFSFFSDMKVKAHPPNRPVYTMLI-TMCGRGGKFVDAANYLVEMTEMG--LVP 425
Query: 515 ITRALIRAVKELEEDAIENG 534
I+R ++ D ++NG
Sbjct: 426 ISRCF-----DMVTDGLKNG 440
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 105/281 (37%), Gaps = 19/281 (6%)
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAA 216
T V ++LL A+C YAL + G K ++N + GK K A
Sbjct: 181 TVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNG----WCSAGKMKEA 236
Query: 217 FEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISW 276
E ++ G IE L + A + KM + G +PD + +I
Sbjct: 237 QEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEA 296
Query: 277 FCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI---SSLCQEDETVKLALDMLDDFSGEA 333
K G+ + +Y A + + LI S + + DE +L + ++D
Sbjct: 297 ISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVED----- 351
Query: 334 RKYAIKPFSS----VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
KPF S +I+ +CR A + S M + PP V+ +I+ + G
Sbjct: 352 ---GHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKF 408
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEI 430
A L M GL P + + G NGG+ + A I
Sbjct: 409 VDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRI 449
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 144/318 (45%), Gaps = 14/318 (4%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFT--IEALSRRKIFDWAWSVCEK 257
+ L+ +KL K +A +F G + + Y FT I+ R A S K
Sbjct: 82 FSRLLIAIAKLNKYEAVISLFRHLEMLG--ISHDLYSFTTLIDCFCRCARLSLALSCLGK 139
Query: 258 MIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDE 317
M++ G P G +++ FC + EA + P + +I SLC++ +
Sbjct: 140 MMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQ 199
Query: 318 TVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
V ALD+L +K I+P ++S+I L + +LS M+ G P
Sbjct: 200 -VNTALDVLK----HMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDV 254
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
F+++I Y K G + A + M R + P++ TY L++G G ++EA ++LN
Sbjct: 255 ITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNV 314
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
+ VTY+TLI GYCK + D +K+L M GV + YN L Q C +A
Sbjct: 315 LVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYC-QAG 373
Query: 494 DWRTAEKLLEDMRLKGLH 511
+ AEK+L M G+H
Sbjct: 374 KFSAAEKVLGRMVSCGVH 391
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 152/349 (43%), Gaps = 16/349 (4%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
+L+ C E +L D + +G + V I N +I + G+ A +V
Sbjct: 154 SLVNGFCHVNRFYEAMSLVDQIVGLGYEP----NVVIYNTIIDSLCEKGQVNTALDVLKH 209
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + TY I L + + + M+ G PD +I + K G+
Sbjct: 210 MKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQ 269
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDML--DDFSGEARKYA 337
EA Y ++ + P LI+ LC DE K+ L++L F A Y
Sbjct: 270 LLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKV-LNVLVSKGFFPNAVTY- 327
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+++I C+ K V +L M +G +N++ Y +AG + A ++L
Sbjct: 328 ----NTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLG 383
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M S G+ PD+YT+ L+ G + G++ +A L + +K+ + + +TY+ +I+G CK +
Sbjct: 384 RMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKAD 443
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMR 506
+ + A L + GV P+V Y ++ L K L WR A +L M+
Sbjct: 444 KVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRL-WREAHELYRKMQ 491
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 1/160 (0%)
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A TL M P P F+ ++ A +K + + + + G+ D+Y++T L+
Sbjct: 63 ALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLID 122
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
+ ++ A L + K S VT+ +L+ G+C + F A+ L++++ +G +P
Sbjct: 123 CFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEP 182
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
NV YN +I SLC K TA +L+ M+ G+ + +T
Sbjct: 183 NVVIYNTIIDSLCEKG-QVNTALDVLKHMKKMGIRPDVVT 221
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 87/244 (35%), Gaps = 9/244 (3%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V + LI ++ K G+ A + +N+ N TY I L + D A V
Sbjct: 254 VITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLN 313
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
++ G P++ +I+ +CK + + + + + L CQ
Sbjct: 314 VLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAG 373
Query: 317 ETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPG 372
+ + G + P F+ ++ LC + A L + G
Sbjct: 374 K-----FSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVG 428
Query: 373 NAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
+N +I KA + A + + +G+ PDV TY +M G EA E+
Sbjct: 429 IITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYR 488
Query: 433 EAKK 436
+ +K
Sbjct: 489 KMQK 492
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 141/320 (44%), Gaps = 10/320 (3%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N ++ GK K A EV ++ C + TY IEA R A + ++M +
Sbjct: 208 NTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRD 267
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED---E 317
G PD +++ CK G+ EA P ++ S+C +
Sbjct: 268 RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD 327
Query: 318 TVKLALDML-DDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
KL DML FS ++ F+ +I LCR + A +L KM G P + +
Sbjct: 328 AEKLLADMLRKGFSP-----SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY 382
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N ++ + K M A+E L+ M SRG PD+ TY +++ G++E+A EILN+
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+TY+T+I G K + A+KLL+EM+ ++P+ Y+ L+ L +
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREG-KVD 501
Query: 497 TAEKLLEDMRLKGLHLNGIT 516
A K + G+ N +T
Sbjct: 502 EAIKFFHEFERMGIRPNAVT 521
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 166/360 (46%), Gaps = 9/360 (2%)
Query: 151 CFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKL 210
C+ +T + L++A C G L D +++ G V N L+ K
Sbjct: 235 CYPDVITYTI---LIEATCRDSGVGHAMKLLDEMRDRGCTPD----VVTYNVLVNGICKE 287
Query: 211 GKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKV 270
G+ A + N GC N T+ + ++ + A + M+ G P
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 271 GKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFS 330
+I++ C+ G A + + P L+ C+E + + A++ L+
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDR-AIEYLERMV 406
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
I +++++ +LC+ V A +L+++ S+G P +N+VI +KAG
Sbjct: 407 SRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTG 466
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A+++L MR++ LKPD TY+ L+ G + G+++EA + +E ++ R + VT+++++
Sbjct: 467 KAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIM 526
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
G CK + D A+ L M + G +PN Y LI+ L + + + A +LL ++ KGL
Sbjct: 527 LGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGM-AKEALELLNELCNKGL 585
Score = 109 bits (272), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 131/278 (47%), Gaps = 5/278 (1%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
+ + R + + E M+ G++PD +I FC+ GK ++A + +
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 299 YPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
P +IS C+ E + AL +LD S + +++++RSLC + A
Sbjct: 169 VPDVITYNVMISGYCKAGE-INNALSVLDRMSVSP---DVVTYNTILRSLCDSGKLKQAM 224
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+L +M+ P + +I A + + AM++L MR RG PDV TY L++G
Sbjct: 225 EVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGI 284
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G+++EA + LN+ + + + +T++ ++R C + A KLL +M G P+V
Sbjct: 285 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 344
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+N LI LC K L R + +LE M G N ++
Sbjct: 345 VTFNILINFLCRKGLLGRAID-ILEKMPQHGCQPNSLS 381
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 129/287 (44%), Gaps = 4/287 (1%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F +LGK + A ++ G V + TY I + + A SV ++M +
Sbjct: 143 LIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS- 201
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD I+ C GK K+A V ++ YP LI + C+ D V A
Sbjct: 202 --PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR-DSGVGHA 258
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+ +LD+ + ++ ++ +C+ + A L+ M S G P N ++ +
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 318
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
G A ++L M +G P V T+ L++ G + A +IL + ++ + +
Sbjct: 319 MCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPN 378
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
++Y+ L+ G+CK ++ D A++ L M G P++ YN ++ +LC
Sbjct: 379 SLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALC 425
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 67/132 (50%), Gaps = 17/132 (12%)
Query: 372 GNAVFNSVISAYS--------------KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
GN ++SV S+++ + G++ + L+ M G PD+ T L+ G
Sbjct: 87 GNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRG 146
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
+ G+ +A +IL + + + +TY+ +I GYCK E + AL +L+ M V P+
Sbjct: 147 FCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPD 203
Query: 478 VDEYNKLIQSLC 489
V YN +++SLC
Sbjct: 204 VVTYNTILRSLC 215
>sp|Q8L6Y3|PP396_ARATH Pentatricopeptide repeat-containing protein At5g24830
OS=Arabidopsis thaliana GN=At5g24830 PE=2 SV=1
Length = 593
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 164/411 (39%), Gaps = 59/411 (14%)
Query: 154 KWVTSGVV------DALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALF 207
K + SGV+ + LL +C + ++ L ++E+G V N LI
Sbjct: 146 KMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCV----SYNTLIKGL 201
Query: 208 SKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFD------------------ 249
+ A +FN YG N+ T + AL ++ +
Sbjct: 202 CSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANA 261
Query: 250 ---------------------WAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHV 288
A V ++M + DS II C G A+
Sbjct: 262 PLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYG 321
Query: 289 VYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSV 344
++ + P LIS+LC+E + D D G + + P + +
Sbjct: 322 FMCDMVKRGVNPDVFTYNTLISALCKEGK-----FDEACDLHGTMQNGGVAPDQISYKVI 376
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
I+ LC DV+ A L M+ P ++N VI Y + GD + A+ +L LM S G+
Sbjct: 377 IQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGV 436
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
KP+VYT L+ GY GG++ +A + NE + TY+ L+ C L A +
Sbjct: 437 KPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQ 496
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
L +EM G QP++ Y +L++ LC K + AE LL ++ G+ ++ +
Sbjct: 497 LYDEMLRRGCQPDIITYTELVRGLCWKG-RLKKAESLLSRIQATGITIDHV 546
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 120/249 (48%), Gaps = 21/249 (8%)
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE-KKMYPPQSVVAF--LISSL 312
+KMI +G +P +++ CK G ++A L RE ++M P + V++ LI L
Sbjct: 145 KKMIYSGVIPGLITHNHLLNGLCKAGYIEKAD---GLVREMREMGPSPNCVSYNTLIKGL 201
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGA--KTLLSKMI- 365
C + K AL + + + KY I+P + ++ +LC+ K V G K LL +++
Sbjct: 202 CSVNNVDK-ALYLFNTMN----KYGIRPNRVTCNIIVHALCQ-KGVIGNNNKKLLEEILD 255
Query: 366 -SEGPPPGNAVFNSVI-SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
S+ P + V +++ + K G++ A+E+ K M + + D Y ++ G + G
Sbjct: 256 SSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGN 315
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
M A + + K TY+TLI CK +FD A L M++ GV P+ Y
Sbjct: 316 MVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKV 375
Query: 484 LIQSLCLKA 492
+IQ LC+
Sbjct: 376 IIQGLCIHG 384
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 71/132 (53%)
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
++ +S++ G + A+ + K M G+ P + T+ L++G G +E+A ++ E
Sbjct: 122 SIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVRE 181
Query: 434 AKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL 493
++ + V+Y+TLI+G C + D AL L N M G++PN N ++ +LC K +
Sbjct: 182 MREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGV 241
Query: 494 DWRTAEKLLEDM 505
+KLLE++
Sbjct: 242 IGNNNKKLLEEI 253
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 109/289 (37%), Gaps = 44/289 (15%)
Query: 209 KLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSE 268
K G A EV+ + A+ Y I L A+ M++ G PD
Sbjct: 277 KNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVF 336
Query: 269 KVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDD 328
+IS CK GK EA ++ + + P Q +I LC + ++ ++
Sbjct: 337 TYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGD-----VNRANE 391
Query: 329 FSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
F K ++ P ++ VI R D A ++L+ M+S G P N++I Y
Sbjct: 392 FLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYV 451
Query: 385 KAGDMTPAMEMLKLMRS-----------------------------------RGLKPDVY 409
K G + A + MRS RG +PD+
Sbjct: 452 KGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDII 511
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
TYT L+ G G++++A +L+ + + V + L + Y +L+
Sbjct: 512 TYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQR 560
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%)
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
SS++R LC + A L KMI G PG N +++ KAG + A +++ MR
Sbjct: 125 SSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMRE 184
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
G P+ +Y L+ G + +++A + N K R + VT + ++ C+
Sbjct: 185 MGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQ 238
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 132/286 (46%), Gaps = 10/286 (3%)
Query: 234 TYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLA 293
T+ I L F+ + + +KM ++G P ++ W+CK G+ K A +
Sbjct: 195 TFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM 254
Query: 294 REKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLC 349
+ K + LI LC+ + K L + D RK I P ++++I
Sbjct: 255 KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRD-----MRKRMIHPNEVTYNTLINGFS 309
Query: 350 RMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVY 409
V A LL++M+S G P + FN++I + G+ A++M +M ++GL P
Sbjct: 310 NEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEV 369
Query: 410 TYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEM 469
+Y L+ G + + A K+N + +TY +I G CK D A+ LLNEM
Sbjct: 370 SYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 429
Query: 470 KDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
G+ P++ Y+ LI C K ++TA++++ + GL NGI
Sbjct: 430 SKDGIDPDIVTYSALINGFC-KVGRFKTAKEIVCRIYRVGLSPNGI 474
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 114/269 (42%), Gaps = 7/269 (2%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G + TY I+ L + D A + +M + G PD +I+ FCK G+ K A
Sbjct: 398 GVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTA 457
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFSS 343
+ + P + + LI + C+ E +++ M+ G R + F+
Sbjct: 458 KEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMI--LEGHTRDHF--TFNV 513
Query: 344 VIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRG 403
++ SLC+ V A+ + M S+G P F+ +I+ Y +G+ A + M G
Sbjct: 514 LVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 573
Query: 404 LKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCAL 463
P +TY L+ G GG + EA + L + + V Y+TL+ CK A+
Sbjct: 574 HHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAV 633
Query: 464 KLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
L EM + P+ Y LI LC K
Sbjct: 634 SLFGEMVQRSILPDSYTYTSLISGLCRKG 662
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 144/360 (40%), Gaps = 17/360 (4%)
Query: 127 ELDLHEDFVLKVLETPLVLGENLVCFFKWVTSGVVDALLKAICSSVGKKEVYALWDIVKE 186
E DL F ++ + N VC + +G++D L C + E L + + +
Sbjct: 383 EFDLARGFYMR-------MKRNGVCVGRITYTGMIDGL----CKNGFLDEAVVLLNEMSK 431
Query: 187 IGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRK 246
G V ++N F K+G+ K A E+ + G N Y I R
Sbjct: 432 DGIDPDIVTYSALING----FCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG 487
Query: 247 IFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVA 306
A + E MI G D +++ CK GK EA + P
Sbjct: 488 CLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFD 547
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
LI+ E +K A + D+ + + S+++ LC+ + A+ L + +
Sbjct: 548 CLINGYGNSGEGLK-AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHA 606
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
++N++++A K+G++ A+ + M R + PD YTYT L+SG G+
Sbjct: 607 VPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVI 666
Query: 427 ACEILNEAKKNHSRL-SPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
A EA+ + L + V Y + G K ++ + +M ++G P++ N +I
Sbjct: 667 AILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMI 726
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 139/351 (39%), Gaps = 48/351 (13%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I +S++GK + ++ + G+ N TY + S+RK ++ + +I
Sbjct: 723 NAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIIL 782
Query: 261 TGSLPDSEKVGKIISWFCK------GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
G LPD ++ C+ G K +A + + ++ + LIS C
Sbjct: 783 NGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFN------MLISKCCA 836
Query: 315 EDETVKLALDMLDDFSG-------------------------------EARKYAIKP--- 340
E + A D++ + E K I P
Sbjct: 837 NGE-INWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESR 895
Query: 341 -FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
+ +I LCR+ D+ A + +MI+ P N ++++ A +K G A +L+ M
Sbjct: 896 KYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFM 955
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
L P + ++T LM G + EA E+ +L V+Y+ LI G C +
Sbjct: 956 LKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDM 1015
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
A +L EMK G N Y LI+ L + + A+ +L+D+ +G
Sbjct: 1016 ALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGF 1066
Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
Query: 338 IKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLK 397
+ F+ +I LC + L+ KM G P +N+V+ Y K G A+E+L
Sbjct: 193 VATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLD 252
Query: 398 LMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLE 457
M+S+G+ DV TY L+ ++ + +L + +K + VTY+TLI G+
Sbjct: 253 HMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEG 312
Query: 458 EFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+ A +LLNEM G+ PN +N LI + +++ A K+ M KGL
Sbjct: 313 KVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEG-NFKEALKMFYMMEAKGL 364
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 1/149 (0%)
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G P N+++ + K+G+ LK M R + PDV T+ L++ G E++
Sbjct: 153 GFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKS 212
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
++ + +K+ + VTY+T++ YCK F A++LL+ MK GV +V YN LI
Sbjct: 213 SYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHD 272
Query: 488 LCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
LC ++ LL DMR + +H N +T
Sbjct: 273 LC-RSNRIAKGYLLLRDMRKRMIHPNEVT 300
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 126/307 (41%), Gaps = 34/307 (11%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N L+ K GK A E G + N ++ I A+SV ++M
Sbjct: 511 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 570
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEA-------HVVYTLAREKKMYPPQSVVAFLISSL 312
+ G P G ++ CKGG +EA H V A + MY L++++
Sbjct: 571 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAV-PAAVDTVMYNT------LLTAM 623
Query: 313 CQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMIS-E 367
C+ K GE + +I P ++S+I LCR KT+++ + + E
Sbjct: 624 CKSGNLAKAV-----SLFGEMVQRSILPDSYTYTSLISGLCR-----KGKTVIAILFAKE 673
Query: 368 GPPPGNAVFNSV-----ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGG 422
GN + N V + KAG + + M + G PD+ T ++ GY+ G
Sbjct: 674 AEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMG 733
Query: 423 QMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYN 482
++E+ ++L E + + TY+ L+ GY K ++ + L + G+ P+ +
Sbjct: 734 KIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCH 793
Query: 483 KLIQSLC 489
L+ +C
Sbjct: 794 SLVLGIC 800
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 2/163 (1%)
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+ L +M+ P A FN +I+ G + +++ M G P + TY ++ Y
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 238
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G+ + A E+L+ K TY+ LI C+ LL +M+ + PN
Sbjct: 239 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 298
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALI 520
YN LI + A +LL +M GL N +T ALI
Sbjct: 299 VTYNTLINGFSNEG-KVLIASQLLNEMLSFGLSPNHVTFNALI 340
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 98/254 (38%)
Query: 235 YYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAR 294
Y + A+ + A S+ +M++ LPDS +IS C+ GK A + A
Sbjct: 616 YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE 675
Query: 295 EKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDV 354
+ P V+ + K + + I +++I RM +
Sbjct: 676 ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 735
Query: 355 HGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGL 414
LL +M ++ P +N ++ YSK D++ + + + + G+ PD T L
Sbjct: 736 EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 795
Query: 415 MSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGV 474
+ G +E +IL + T++ LI C E + A L+ M +G+
Sbjct: 796 VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 855
Query: 475 QPNVDEYNKLIQSL 488
+ D + ++ L
Sbjct: 856 SLDKDTCDAMVSVL 869
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 135/290 (46%), Gaps = 2/290 (0%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G N T+ I L A ++ ++M+ G PD G +++ CK G A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIR 346
+ + K+ P + +I LC+ + AL++ + + + + +SS+I
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH-MDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 347 SLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKP 406
LC A LLS MI P F+++I A+ K G + A ++ M R + P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
+ TY+ L++G+ +++EA ++ H VTY+TLI+G+CK + + +++
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
EM G+ N YN LIQ L +A D A+++ ++M G+ N +T
Sbjct: 420 REMSQRGLVGNTVTYNILIQGL-FQAGDCDMAQEIFKEMVSDGVPPNIMT 468
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 175/415 (42%), Gaps = 14/415 (3%)
Query: 112 QSSVDGYLESSLDSFELDLHEDFVLKVLETPLVLGENLV---CFFKWVTSGVVDALLKAI 168
Q V GY +++ +F +H F+ + L + +V C VT GVV + +
Sbjct: 176 QMFVTGYQPNTV-TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVV---VNGL 231
Query: 169 CSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGC 228
C + L + +++ G+ E GVL I N +I K A +F + G
Sbjct: 232 CKRGDTDLAFNLLNKMEQ-GKLEPGVL---IYNTIIDGLCKYKHMDDALNLFKEMETKGI 287
Query: 229 VANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHV 288
N TY I L + A + MIE PD +I F K GK EA
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 347
Query: 289 VYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSL 348
+Y ++ + P + LI+ C D + A M + + + ++++I+
Sbjct: 348 LYDEMVKRSIDPSIVTYSSLINGFCMHDR-LDEAKQMFEFMVSKHCFPDVVTYNTLIKGF 406
Query: 349 CRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDV 408
C+ K V + +M G +N +I +AGD A E+ K M S G+ P++
Sbjct: 407 CKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 466
Query: 409 YTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNE 468
TY L+ G G++E+A + +++ + TY+ +I G CK + + L
Sbjct: 467 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN 526
Query: 469 MKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN-GITRALIRA 522
+ GV+P+V YN +I C K A+ L ++M+ G N G LIRA
Sbjct: 527 LSLKGVKPDVVAYNTMISGFCRKG-SKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Score = 102 bits (255), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 144/302 (47%), Gaps = 14/302 (4%)
Query: 233 ETYYFTIEALSRRKI----FDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHV 288
+T Y E LSR + D A ++ +M+++ P + K++S K K V
Sbjct: 43 KTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFD---V 99
Query: 289 VYTLARE-KKMYPPQS--VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVI 345
V +L + + + P + + LI+ C+ + + LAL +L + I SS++
Sbjct: 100 VISLGEQMQNLGIPHNHYTYSILINCFCRRSQ-LPLALAVLGKMMKLGYEPNIVTLSSLL 158
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
C K + A L+ +M G P FN++I + AM ++ M ++G +
Sbjct: 159 NGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQ 218
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
PD+ TY +++G G + A +LN+ ++ + Y+T+I G CK + D AL L
Sbjct: 219 PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 278
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRA-V 523
EM+ G++PNV Y+ LI LC W A +LL DM + ++ + T ALI A V
Sbjct: 279 FKEMETKGIRPNVVTYSSLISCLCNYG-RWSDASRLLSDMIERKINPDVFTFSALIDAFV 337
Query: 524 KE 525
KE
Sbjct: 338 KE 339
Score = 102 bits (254), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 160/381 (41%), Gaps = 45/381 (11%)
Query: 180 LWDIVKEIGE--KEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYF 237
L D V GE K + ++ ++L++ +K+ K + + + G N TY
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 238 TIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKG----------------- 280
I RR A +V KM++ G P+ + +++ +C
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 281 ------------------GKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
KA EA + K P +++ LC+ +T LA
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT-DLA 240
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++L+ + + ++++I LC+ K + A L +M ++G P ++S+IS
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
G + A +L M R + PDV+T++ L+ + G++ EA ++ +E K S
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
VTY +LI G+C + D A ++ M P+V YN LI+ C ++ E+ +
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC----KYKRVEEGM 416
Query: 503 E---DMRLKGLHLNGITRALI 520
E +M +GL N +T ++
Sbjct: 417 EVFREMSQRGLVGNTVTYNIL 437
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 2/227 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI F K + + EVF + G V N TY I+ L + D A + ++M+
Sbjct: 400 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 459
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G P+ ++ CK GK ++A VV+ + KM P +I +C+ + V+
Sbjct: 460 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK-VE 518
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
D+ + S + K + ++++I CR A L +M +G P + +N++I
Sbjct: 519 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
A + GD + E++K MRS G D T GL++ + G+++++
Sbjct: 579 RARLRDGDREASAELIKEMRSCGFAGDAST-IGLVTNMLHDGRLDKS 624
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 141/319 (44%), Gaps = 6/319 (1%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
+ L++ SK+ K ++ + G N T + R A S KMI
Sbjct: 84 FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMI 143
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM-YPPQSVV-AFLISSLCQEDE 317
+ G P G +++ FC+G + +A +Y + M Y P V+ +I LC+ +
Sbjct: 144 KLGHEPSIVTFGSLLNGFCRGDRVYDA--LYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQ 201
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
V ALD+L+ + + ++S+I LC A ++S M P FN
Sbjct: 202 -VDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFN 260
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
++I A K G ++ A E + M R L PD+ TY+ L+ G +++EA E+
Sbjct: 261 ALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSK 320
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
VTY LI GYCK ++ + +KL EM GV N Y LIQ C +A
Sbjct: 321 GCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYC-RAGKLNV 379
Query: 498 AEKLLEDMRLKGLHLNGIT 516
AE++ M G+H N IT
Sbjct: 380 AEEIFRRMVFCGVHPNIIT 398
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 129/284 (45%), Gaps = 6/284 (2%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKM 298
+ A+S+ K +D + E+M G + +++ FC+ + A + L + K+
Sbjct: 88 LSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLA--LSFLGKMIKL 145
Query: 299 YPPQSVVAF--LISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHG 356
S+V F L++ C+ D AL M D G K + ++++I LC+ K V
Sbjct: 146 GHEPSIVTFGSLLNGFCRGDRVYD-ALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDN 204
Query: 357 AKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMS 416
A LL++M +G P +NS+IS +G + A M+ M R + PDV+T+ L+
Sbjct: 205 ALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALID 264
Query: 417 GYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQP 476
G++ EA E E + VTY LI G C D A ++ M G P
Sbjct: 265 ACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFP 324
Query: 477 NVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGITRALI 520
+V Y+ LI C K+ KL +M +G+ N +T ++
Sbjct: 325 DVVTYSILINGYC-KSKKVEHGMKLFCEMSQRGVVRNTVTYTIL 367
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 145/352 (41%), Gaps = 35/352 (9%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
++ L+ F + + A +F++ G N Y I+ L + K D A +
Sbjct: 150 SIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLL 209
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+M + G PD +IS C G+ +A + + ++++YP LI + +E
Sbjct: 210 NRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKE 269
Query: 316 ----------DETVKLALD-----------------MLDD----FSGEARKYA---IKPF 341
+E ++ +LD LD+ F K + +
Sbjct: 270 GRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTY 329
Query: 342 SSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRS 401
S +I C+ K V L +M G + +I Y +AG + A E+ + M
Sbjct: 330 SILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVF 389
Query: 402 RGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDC 461
G+ P++ TY L+ G + G++E+A IL + +KN VTY+ +IRG CK E
Sbjct: 390 CGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVAD 449
Query: 462 ALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
A + + G+ P++ Y ++ L K L R A+ L M+ G+ N
Sbjct: 450 AWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLR-READALFRKMKEDGILPN 500
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 97/191 (50%), Gaps = 3/191 (1%)
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+I FS ++ ++ +MK L +M G P N +++ + + ++ A+ L
Sbjct: 80 SIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFL 139
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
M G +P + T+ L++G+ G ++ +A + ++ + + V Y+T+I G CK
Sbjct: 140 GKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKS 199
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
++ D AL LLN M+ G+ P+V YN LI LC W A +++ M + ++ + T
Sbjct: 200 KQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSG-RWSDATRMVSCMTKREIYPDVFT 258
Query: 517 -RALIRA-VKE 525
ALI A VKE
Sbjct: 259 FNALIDACVKE 269
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 83/176 (47%), Gaps = 1/176 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
+ ++R+ R + + L M+ P P A F+ ++SA SK + + + M+
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
G+ ++ T L++ + Q+ A L + K S VT+ +L+ G+C+ +
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
AL + ++M +G +PNV YN +I LC K+ A LL M G+ + +T
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLC-KSKQVDNALDLLNRMEKDGIGPDVVT 223
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 95/244 (38%), Gaps = 39/244 (15%)
Query: 194 VLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWS 253
++T +L + ++S+L + + E+F GC + TY I + K +
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAE---EMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMK 347
Query: 254 VCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLC 313
+ +M + G + ++ +I +C+ GK A ++ ++P L+ LC
Sbjct: 348 LFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLC 407
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
+ K AL +L D I ++ +IR +C
Sbjct: 408 DNGKIEK-ALVILADMQKNGMDADIVTYNIIIRGMC------------------------ 442
Query: 374 AVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNE 433
KAG++ A ++ + +GL PD++TYT +M G G EA + +
Sbjct: 443 -----------KAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRK 491
Query: 434 AKKN 437
K++
Sbjct: 492 MKED 495
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 129/284 (45%), Gaps = 4/284 (1%)
Query: 206 LFSKLGKGK---AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+ SK+ K K +F+ G + +Y I L R F A SV KM++ G
Sbjct: 75 VLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFG 134
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD V +I+ FC+G + +A + + E P + +I C+ V A
Sbjct: 135 YEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIG-LVNDA 193
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+++ D + + ++S++ LC A L+ M+ P F +VI
Sbjct: 194 VELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDV 253
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
+ K G + AM++ + M R + PDV+TY L++G G+++EA ++L+
Sbjct: 254 FVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPD 313
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
VTY+TLI G+CK + D KL EM G+ + YN +IQ
Sbjct: 314 VVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQ 357
Score = 99.0 bits (245), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 148/351 (42%), Gaps = 11/351 (3%)
Query: 161 VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLT-VEILNELIALFSKLGKGKAAFEV 219
V +L+ C V+ D+V ++ +E G V I N +I K+G A E+
Sbjct: 142 VSSLINGFCQG---NRVFDAIDLVSKM--EEMGFRPDVVIYNTIIDGSCKIGLVNDAVEL 196
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
F++ G A+ TY + L + A + M+ +P+ +I F K
Sbjct: 197 FDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVK 256
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIK 339
GK EA +Y + + P LI+ LC V A MLD + +
Sbjct: 257 EGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR-VDEAKQMLDLMVTKGCLPDVV 315
Query: 340 PFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLM 399
++++I C+ K V L +M G +N++I Y +AG A E+ M
Sbjct: 316 TYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM 375
Query: 400 RSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEF 459
SR P++ TY+ L+ G ++E+A + +K+ L TY+ +I G CK+
Sbjct: 376 DSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNV 432
Query: 460 DCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
+ A L + G++P+V Y +I C K W ++ L M+ GL
Sbjct: 433 EDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKR-QWDKSDLLYRKMQEDGL 482
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 125/281 (44%), Gaps = 31/281 (11%)
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKK-------MYPPQSVVAFLI 309
KMI++ LP K++S K K+K +V +L + +Y V I
Sbjct: 59 KMIQSRPLPSIVDFSKVLS---KIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIV----I 111
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMI 365
+ LC+ V +AL ++ G+ K+ +P SS+I C+ V A L+SKM
Sbjct: 112 NCLCRCSRFV-IALSVV----GKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME 166
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
G P ++N++I K G + A+E+ M G++ D TY L++G G+
Sbjct: 167 EMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWS 226
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
+A ++ + + +T+ +I + K +F A+KL EM V P+V YN LI
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286
Query: 486 QSLCL--------KALDWRTAEKLLEDMRLKGLHLNGITRA 518
LC+ + LD + L D+ +NG ++
Sbjct: 287 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKS 327
Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 122/279 (43%), Gaps = 2/279 (0%)
Query: 238 TIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKK 297
+ +++ K +D S+ M G D +I+ C+ + A V +
Sbjct: 75 VLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFG 134
Query: 298 MYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGA 357
P V+ LI+ CQ + A+D++ + + ++++I C++ V+ A
Sbjct: 135 YEPDVVTVSSLINGFCQGNRVFD-AIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDA 193
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
L +M +G +NS+++ +G + A +++ M R + P+V T+T ++
Sbjct: 194 VELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDV 253
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
+ G+ EA ++ E + TY++LI G C D A ++L+ M G P+
Sbjct: 254 FVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPD 313
Query: 478 VDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
V YN LI C K+ KL +M +GL + IT
Sbjct: 314 VVTYNTLINGFC-KSKRVDEGTKLFREMAQRGLVGDTIT 351
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 1/157 (0%)
Query: 360 LLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYA 419
L KMI P P F+ V+S +K+ + + + M G+ D+Y+Y +++
Sbjct: 56 LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC 115
Query: 420 NGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVD 479
+ A ++ + K VT +LI G+C+ A+ L+++M+++G +P+V
Sbjct: 116 RCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 175
Query: 480 EYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
YN +I C L A +L + M G+ + +T
Sbjct: 176 IYNTIIDGSCKIGL-VNDAVELFDRMERDGVRADAVT 211
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 147/335 (43%), Gaps = 24/335 (7%)
Query: 189 EKEKGVLTVEILNELIAL--FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRK 246
E ++G L ++ I + F K G + A + FN+ + GC N TY I A + K
Sbjct: 508 EMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK 567
Query: 247 IFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVA 306
+A + E M+ G LP+ +I CK G+ ++A ++ K P
Sbjct: 568 KVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVP------ 621
Query: 307 FLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMIS 366
V + DD + + + + +++ C+ V A+ LL M
Sbjct: 622 -----------DVDMYFKQYDD---NSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSM 667
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
EG P V++++I K G + A E+ M G +YTY+ L+ Y + +
Sbjct: 668 EGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDL 727
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A ++L++ +N + V Y +I G CK+ + D A KL+ M++ G QPNV Y +I
Sbjct: 728 ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 787
Query: 487 SLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALI 520
+ T +LLE M KG+ N +T R LI
Sbjct: 788 GFGMIG-KIETCLELLERMGSKGVAPNYVTYRVLI 821
Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 129/305 (42%), Gaps = 23/305 (7%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + K K A E+F GC+ N TY I+ + + A + E+M +
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 618
Query: 263 SLPD-----------SEK-----VGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVA 306
+PD SE+ G ++ FCK + +EA + + P Q V
Sbjct: 619 DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 678
Query: 307 FLISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSK 363
LI LC+ DE ++ +M S + +SS+I ++K A +LSK
Sbjct: 679 ALIDGLCKVGKLDEAQEVKTEM----SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSK 734
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
M+ P ++ +I K G A +++++M +G +P+V TYT ++ G+ G+
Sbjct: 735 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK 794
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
+E E+L + VTY LI CK D A LL EMK + Y K
Sbjct: 795 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRK 854
Query: 484 LIQSL 488
+I+
Sbjct: 855 VIEGF 859
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 134/330 (40%), Gaps = 6/330 (1%)
Query: 181 WDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIE 240
W + E E V +LI+ + + A + N+ C+ N TY +
Sbjct: 286 WREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLC 345
Query: 241 ALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYP 300
+K V M+ G P + ++ +C G A+ + + P
Sbjct: 346 GCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMP 405
Query: 301 PQSVVAFLISSLCQEDETVKL-ALDMLDDFSGEARKYAIK----PFSSVIRSLCRMKDVH 355
V LI S+C + +++ LD+ + E + SS R LC
Sbjct: 406 GYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYE 465
Query: 356 GAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLM 415
A +++ +MI +G P + ++ V++ A M A + + M+ GL DVYTYT ++
Sbjct: 466 KAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMV 525
Query: 416 SGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQ 475
+ G +E+A + NE ++ + VTY LI Y K ++ A +L M G
Sbjct: 526 DSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCL 585
Query: 476 PNVDEYNKLIQSLCLKALDWRTAEKLLEDM 505
PN+ Y+ LI C KA A ++ E M
Sbjct: 586 PNIVTYSALIDGHC-KAGQVEKACQIFERM 614
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 136/335 (40%), Gaps = 12/335 (3%)
Query: 156 VTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKA 215
VT G ALL C S +E L D + G + + + + LI K+GK
Sbjct: 640 VTYG---ALLDGFCKSHRVEEARKLLDAMSMEGCEPNQI----VYDALIDGLCKVGKLDE 692
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A EV + ++G A TY I+ + K D A V KM+E P+ ++I
Sbjct: 693 AQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMID 752
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARK 335
CK GK EA+ + + EK P +I + ++ L++L+ +
Sbjct: 753 GLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK-IETCLELLERMGSKGVA 811
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
+ +I C+ + A LL +M P A + VI ++K + ++ +
Sbjct: 812 PNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGL 869
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV--TYHTLIRGY 453
L + P + Y L+ ++E A +L E + L TY++LI
Sbjct: 870 LDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESL 929
Query: 454 CKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
C + + A +L +EM GV P + + LI+ L
Sbjct: 930 CLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGL 964
Score = 41.6 bits (96), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
E L + + + + + L+R +C+ F AL+ L +KD +P+ YN LIQ+
Sbjct: 186 EFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAF 245
Query: 489 CLKALDWRTAEKLLEDMRLKGLHLNGIT 516
LKA +A + +M L L ++G T
Sbjct: 246 -LKADRLDSASLIHREMSLANLRMDGFT 272
Score = 40.0 bits (92), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 4/141 (2%)
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
N ++ + + G + A+E L ++ +P TY L+ + +++ A I E
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDW 495
+ R+ T CK+ ++ AL L+ V P+ Y KLI LC +L +
Sbjct: 263 LANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFV---PDTVFYTKLISGLCEASL-F 318
Query: 496 RTAEKLLEDMRLKGLHLNGIT 516
A L MR N +T
Sbjct: 319 EEAMDFLNRMRATSCLPNVVT 339
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 135/288 (46%), Gaps = 1/288 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I K G AFE+ GC + +Y + AL + ++ + KM
Sbjct: 267 NTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 326
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
P+ +I+ C+ GK +EA + L +EK + P LI++ C+E +
Sbjct: 327 EKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGR-LD 385
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
+A++ L+ + I +++V+ +LC+ A + K+ G P ++ +N++
Sbjct: 386 VAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMF 445
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
SA +GD A+ M+ M S G+ PD TY ++S G ++EA E+L + +
Sbjct: 446 SALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFH 505
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
S VTY+ ++ G+CK + A+ +L M G +PN Y LI+ +
Sbjct: 506 PSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 143/329 (43%), Gaps = 14/329 (4%)
Query: 184 VKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALS 243
V EI EK G V N LI F K+ + A V ++ + TY I +L
Sbjct: 146 VMEILEK-FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLC 204
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS 303
R D A V +++ P +I G EA + + + P
Sbjct: 205 SRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMF 264
Query: 304 VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSK 363
+I +C+E V A +M+ + + + + ++ ++R+L + L++K
Sbjct: 265 TYNTIIRGMCKEG-MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTK 323
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
M SE P ++ +I+ + G + AM +LKLM+ +GL PD Y+Y L++ + G+
Sbjct: 324 MFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGR 383
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
++ A E L + V Y+T++ CK + D AL++ ++ +VG PN YN
Sbjct: 384 LDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNT 443
Query: 484 LIQSLCLKALDWRTAEKLLEDMRLKGLHL 512
+ +L W + +K ++ LH+
Sbjct: 444 MFSAL------WSSGDK------IRALHM 460
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 143/344 (41%), Gaps = 11/344 (3%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N +I GK A +V N+ C TY IEA D A + ++M+
Sbjct: 197 NIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS 256
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DE 317
G PD II CK G A + K P L+ +L + +E
Sbjct: 257 RGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEE 316
Query: 318 TVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFN 377
KL M E + +S +I +LCR + A LL M +G P ++
Sbjct: 317 GEKLMTKMF----SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYD 372
Query: 378 SVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKN 437
+I+A+ + G + A+E L+ M S G PD+ Y +++ G+ ++A EI + +
Sbjct: 373 PLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEV 432
Query: 438 HSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRT 497
+ +Y+T+ + AL ++ EM G+ P+ YN +I LC + +
Sbjct: 433 GCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGM-VDE 491
Query: 498 AEKLLEDMRLKGLHLNGITRALIR---AVKELEEDAIENGEALV 538
A +LL DMR H + +T ++ EDAI E++V
Sbjct: 492 AFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMV 535
>sp|Q0WMY5|PP365_ARATH Pentatricopeptide repeat-containing protein At5g04810,
chloroplastic OS=Arabidopsis thaliana GN=PPR4 PE=1 SV=1
Length = 952
Score = 109 bits (272), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 149/348 (42%), Gaps = 14/348 (4%)
Query: 178 YALWDIVKEIGEKEKGVLTVEILNE------------LIALFSKLGKGKAAFEVFNKFGD 225
+ + D + +++KG++ + L E LI L++K+GK A EV +
Sbjct: 453 HTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKE 512
Query: 226 YGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKE 285
G N +TY I + K + A++V E M++ G PD IIS FC G
Sbjct: 513 EGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDR 572
Query: 286 AHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVI 345
A ++ + P +I + + ++ +L++ D + F+ +I
Sbjct: 573 AIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD-MRRSLEVFDMMRRCGCVPTVHTFNGLI 631
Query: 346 RSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLK 405
L + + A +L +M G + ++ Y+ GD A E +++ GL
Sbjct: 632 NGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLD 691
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
D++TY L+ G+M+ A + E + + Y+ LI G+ + + A L
Sbjct: 692 VDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADL 751
Query: 466 LNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
+ +MK GV+P++ Y I S C KA D A + +E+M G+ N
Sbjct: 752 IQQMKKEGVKPDIHTYTSFI-SACSKAGDMNRATQTIEEMEALGVKPN 798
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 134/346 (38%), Gaps = 37/346 (10%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
++ + + G A E F + G Y I A + + D A S KM E G
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 374
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
I+ F K G A+ A + A+ S+ +I + CQ ++ A
Sbjct: 375 IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTC-NMERA 433
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
++ + E I + +++ + D + ++ G P + +I+
Sbjct: 434 EALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINL 493
Query: 383 YSKAGDMTPAMEMLKLMR-----------------------------------SRGLKPD 407
Y+K G ++ A+E+ ++M+ G+KPD
Sbjct: 494 YTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPD 553
Query: 408 VYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLN 467
V Y ++S + G M+ A + + E +K R + T+ +I GY K + +L++ +
Sbjct: 554 VILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFD 613
Query: 468 EMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLN 513
M+ G P V +N LI L K A ++L++M L G+ N
Sbjct: 614 MMRRCGCVPTVHTFNGLINGLVEKR-QMEKAVEILDEMTLAGVSAN 658
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 93/194 (47%), Gaps = 11/194 (5%)
Query: 310 SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSV-----------IRSLCRMKDVHGAK 358
SS QE E + +L + D +G+ + I F + ++ R D+H A+
Sbjct: 270 SSWHQEREGSRKSLQRILDTNGDNWQAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRAR 329
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGY 418
+M + G P + ++ S+I AY+ DM A+ ++ M+ G++ + TY+ ++ G+
Sbjct: 330 ETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGF 389
Query: 419 ANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
+ G E A +EAK+ H L+ Y +I +C+ + A L+ EM++ G+ +
Sbjct: 390 SKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPI 449
Query: 479 DEYNKLIQSLCLKA 492
Y+ ++ + A
Sbjct: 450 AIYHTMMDGYTMVA 463
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 108/279 (38%), Gaps = 37/279 (13%)
Query: 184 VKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALS 243
VKE+ +K + T +I ++K G + + EVF+ GCV T+ I L
Sbjct: 577 VKEM-QKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLV 635
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS 303
++ + A + ++M G + KI+ + G +A +T + + +
Sbjct: 636 EKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIF 695
Query: 304 VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSK 363
L+ + C+ ++ AL + + S ++ +I R DV A L+ +
Sbjct: 696 TYEALLKACCKSGR-MQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQ 754
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPA------MEMLKL------------------- 398
M EG P + S ISA SKAGDM A ME L +
Sbjct: 755 MKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASL 814
Query: 399 ----------MRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
M++ G+KPD Y L++ + + EA
Sbjct: 815 PEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEA 853
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 160/382 (41%), Gaps = 37/382 (9%)
Query: 171 SVGKKEVYALWDIVKEIGE--KEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGC 228
S+ + L D V G+ K + ++ ++L++ +K+ K + + + G
Sbjct: 53 SINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGI 112
Query: 229 VANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA-- 286
N TY I RR A +V KM++ G PD + +++ FC G + +A
Sbjct: 113 SHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVS 172
Query: 287 ------------------HVVYTLAREKKMYPPQSVVAFLISSLCQEDET---------- 318
+++ L R + ++V ++ CQ D
Sbjct: 173 LVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLC 232
Query: 319 ----VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
+ LAL +L + + ++++I +LC K+V+ A L ++M ++G P
Sbjct: 233 KRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 292
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
+NS+I G + A +L M R + P+V T++ L+ + G++ EA ++ +E
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALD 494
K TY +LI G+C + D A + M PNV YN LI+ C KA
Sbjct: 353 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC-KAKR 411
Query: 495 WRTAEKLLEDMRLKGLHLNGIT 516
+L +M +GL N +T
Sbjct: 412 VDEGMELFREMSQRGLVGNTVT 433
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 183/429 (42%), Gaps = 19/429 (4%)
Query: 101 GDKLENVLSLLQSSVD-GYLESSLDSFELDLHEDFVLKVLETPLVLGENLV---CFFKWV 156
G+++ + +SL+ V+ GY S +F +H F + L + +V C V
Sbjct: 164 GNRISDAVSLVGQMVEMGYQPDSF-TFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLV 222
Query: 157 TSGVVDALLKAICSSVGKKEVYALWDIVKEI--GEKEKGVLTVEILNELIALFSKLGKGK 214
T G+V + +C + ++ ++K++ G+ E GV+ I N +I
Sbjct: 223 TYGIV---VNGLCK---RGDIDLALSLLKKMEQGKIEPGVV---IYNTIIDALCNYKNVN 273
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKII 274
A +F + + G N TY I L + A + MIE P+ +I
Sbjct: 274 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 333
Query: 275 SWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEAR 334
F K GK EA +Y ++ + P + LI+ C D + A M + +
Sbjct: 334 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR-LDEAKHMFELMISKDC 392
Query: 335 KYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
+ ++++I+ C+ K V L +M G + ++I + +A + A
Sbjct: 393 FPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQI 452
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+ K M S G+ PD+ TY+ L+ G N G++E A + +++ TY+ +I G C
Sbjct: 453 VFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMC 512
Query: 455 KLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG-LHLN 513
K + + L + GV+PNV Y ++ C K L A+ L +M+ +G L +
Sbjct: 513 KAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLK-EEADALFREMKEEGPLPDS 571
Query: 514 GITRALIRA 522
G LIRA
Sbjct: 572 GTYNTLIRA 580
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 112/222 (50%), Gaps = 4/222 (1%)
Query: 306 AFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI 365
+ LI+ C+ + + LAL +L + I +S++ C + A +L+ +M+
Sbjct: 120 SILINCFCRRSQ-LSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
G P + FN++I + + A+ ++ M +G +PD+ TY +++G G ++
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
A +L + ++ V Y+T+I C + + AL L EM + G++PNV YN LI
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 486 QSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRA-VKE 525
+ LC W A +LL DM + ++ N +T ALI A VKE
Sbjct: 299 RCLCNYG-RWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 339
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 2/227 (0%)
Query: 201 NELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIE 260
N LI F K + E+F + G V N TY I + + D A V ++M+
Sbjct: 400 NTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS 459
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
G LPD ++ C GK + A VV+ + KM P +I +C+ + V+
Sbjct: 460 DGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK-VE 518
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
D+ S + K + +++++ CR A L +M EGP P + +N++I
Sbjct: 519 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
A+ + GD + E+++ MRS D T GL++ + G+++++
Sbjct: 579 RAHLRDGDKAASAELIREMRSCRFVGDAST-IGLVTNMLHDGRLDKS 624
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 108/275 (39%), Gaps = 1/275 (0%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
V + LI F K GK A +++++ + TY I D A +
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 384
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
E MI P+ +I FCK + E ++ ++ + LI Q
Sbjct: 385 ELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 444
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
E + + + I +S ++ LC V A + + P
Sbjct: 445 RECDNAQI-VFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYT 503
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAK 435
+N +I KAG + ++ + +G+KP+V TYT +MSG+ G EEA + E K
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMK 563
Query: 436 KNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMK 470
+ TY+TLIR + + + + +L+ EM+
Sbjct: 564 EEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 598
Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 102/223 (45%), Gaps = 24/223 (10%)
Query: 328 DFSG---EARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYS 384
DFSG + RK +I + + ++ D A L M+ P P F+ ++SA +
Sbjct: 41 DFSGVRYDYRKISINRLNDL-----KLDD---AVNLFGDMVKSRPFPSIVEFSKLLSAIA 92
Query: 385 KAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPV 444
K + + + M++ G+ ++YTY+ L++ + Q+ A +L + K V
Sbjct: 93 KMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIV 152
Query: 445 TYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL--------CLKALDWR 496
T ++L+ G+C A+ L+ +M ++G QP+ +N LI L + +D
Sbjct: 153 TLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRM 212
Query: 497 TAEKLLEDMRLKGLHLNGITRA-----LIRAVKELEEDAIENG 534
+ D+ G+ +NG+ + + +K++E+ IE G
Sbjct: 213 VVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPG 255
>sp|P0C8A0|PP275_ARATH Pentatricopeptide repeat-containing protein At3g49730
OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1
Length = 638
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 176/403 (43%), Gaps = 9/403 (2%)
Query: 92 KEEEAYEIDGDKLENVLSLLQSSVDGYLESSLDSFELDLHEDFVLKVLETPLVLGENLVC 151
K E+ + + +K+ +L S V LE +L+ +DL +++VL G
Sbjct: 58 KHEDEFAGEVEKIYRILRNHHSRVPK-LELALNESGIDLRPGLIIRVLSRCGDAGNLGYR 116
Query: 152 FFKWVTSGVVDALLKAICSSV-----GKKEVYALWDIVKEIGEKEKGVLTVEILNELIAL 206
FF W T +C S+ ++ A+W +++E+ + ++ E+ L+
Sbjct: 117 FFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRR 176
Query: 207 FSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPD 266
F+ K A EV ++ YG ++ + ++AL + A V E M E P+
Sbjct: 177 FASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFP-PN 235
Query: 267 SEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML 326
++ +C+ GK EA V +E + P V L+S + A D++
Sbjct: 236 LRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMAD-AYDLM 294
Query: 327 DDFSGEARKYAIKPFSSVIRSLCRM-KDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSK 385
+D + + ++ +I++LCR K + A + +M G + ++IS + K
Sbjct: 295 NDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCK 354
Query: 386 AGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVT 445
G + +L MR +G+ P TY +M + Q EE E++ + K+ +
Sbjct: 355 WGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLI 414
Query: 446 YHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
Y+ +IR CKL E A++L NEM+ G+ P VD + +I
Sbjct: 415 YNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGF 457
Score = 99.4 bits (246), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 127/258 (49%), Gaps = 20/258 (7%)
Query: 282 KAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKYAI 338
K ++ V+ L E + P+ + L L + VK A+++LD E KY +
Sbjct: 143 KMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLD----EMPKYGL 198
Query: 339 KP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAME 394
+P F ++ +LC+ V A + M E PP F S++ + + G + A E
Sbjct: 199 EPDEYVFGCLLDALCKNGSVKEASKVFEDM-REKFPPNLRYFTSLLYGWCREGKLMEAKE 257
Query: 395 MLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYC 454
+L M+ GL+PD+ +T L+SGYA+ G+M +A +++N+ +K + Y LI+ C
Sbjct: 258 VLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALC 317
Query: 455 KLEE-FDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK---LLEDMRLKGL 510
+ E+ D A+++ EM+ G + ++ Y LI C W +K +L+DMR KG+
Sbjct: 318 RTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFC----KWGMIDKGYSVLDDMRKKGV 373
Query: 511 HLNGITRALIRAVKELEE 528
+ +T I E +E
Sbjct: 374 MPSQVTYMQIMVAHEKKE 391
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 124/297 (41%), Gaps = 6/297 (2%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSR-RKIFDWAWSVC 255
+ + L++ ++ GK A+++ N G N Y I+AL R K D A V
Sbjct: 271 IVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVF 330
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
+M G D +IS FCK G + + V R+K + P Q V I ++
Sbjct: 331 VEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQ-VTYMQIMVAHEK 389
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAV 375
E + L++++ + ++ VIR C++ +V A L ++M + G PG
Sbjct: 390 KEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDT 449
Query: 376 FNSVISAYSKAGDMTPAMEMLKLMRSRGL--KPDVYTYTGLMSGYANGGQMEEACEILN- 432
F +I+ ++ G + A K M SRG+ P T L++ ++E A ++ +
Sbjct: 450 FVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSC 509
Query: 433 -EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
K + L+ + I A +M ++ + P + Y KL++ L
Sbjct: 510 ISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGL 566
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 143/296 (48%), Gaps = 15/296 (5%)
Query: 251 AWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLIS 310
A V +++ + P +I+ +CK G E + + + P + LI+
Sbjct: 259 AQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALIN 318
Query: 311 SLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMIS 366
+LC+E++ +D E K + P F+++I R ++ K KM+S
Sbjct: 319 ALCKENK-----MDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLS 373
Query: 367 EGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEE 426
+G P ++N++++ + K GD+ A ++ M RGL+PD TYT L+ G+ GG +E
Sbjct: 374 KGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVET 433
Query: 427 ACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
A EI E +N L V + L+ G CK A + L EM G++P+ Y ++
Sbjct: 434 ALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMD 493
Query: 487 SLCLKALDWRTAEKLLEDMRLKGLHLNGIT--RALIRAVKELEEDAIENGEALVEA 540
+ C K D +T KLL++M+ G H+ + L+ + +L + ++N + L++A
Sbjct: 494 AFCKKG-DAQTGFKLLKEMQSDG-HVPSVVTYNVLLNGLCKLGQ--MKNADMLLDA 545
Score = 95.5 bits (236), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 132/295 (44%), Gaps = 9/295 (3%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
TV N LI + K+G F + ++ + TY I AL + D A +
Sbjct: 274 TVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLF 333
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE 315
++M + G +P+ +I + G+ Y K + P + L++ C+
Sbjct: 334 DEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKN 393
Query: 316 DETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
+ V A +++D G R+ ++P ++++I CR DV A + +M G
Sbjct: 394 GDLVA-ARNIVD---GMIRR-GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIEL 448
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
F++++ K G + A L+ M G+KPD TYT +M + G + ++L
Sbjct: 449 DRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLL 508
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQ 486
E + + S VTY+ L+ G CKL + A LL+ M ++GV P+ YN L++
Sbjct: 509 KEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLE 563
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 133/314 (42%), Gaps = 4/314 (1%)
Query: 184 VKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALS 243
+K EK + V + LI K K A +F++ G + N + I S
Sbjct: 297 LKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHS 356
Query: 244 RRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQS 303
R D +KM+ G PD +++ FCK G A + + + P +
Sbjct: 357 RNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKI 416
Query: 304 VVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSK 363
LI C+ + V+ AL++ + + FS+++ +C+ V A+ L +
Sbjct: 417 TYTTLIDGFCRGGD-VETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALRE 475
Query: 364 MISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQ 423
M+ G P + + ++ A+ K GD ++LK M+S G P V TY L++G GQ
Sbjct: 476 MLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQ 535
Query: 424 MEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNK 483
M+ A +L+ +TY+TL+ G+ + + K + ++G+ ++ Y
Sbjct: 536 MKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHAN---SSKRYIQKPEIGIVADLASYKS 592
Query: 484 LIQSLCLKALDWRT 497
++ L + D R
Sbjct: 593 IVNELDRASKDHRN 606
Score = 75.9 bits (185), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 84/176 (47%), Gaps = 1/176 (0%)
Query: 341 FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
F+ ++ C+ ++ A+ + ++ P FN++I+ Y K G++ + M
Sbjct: 243 FNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQME 302
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
+PDV+TY+ L++ +M+ A + +E K + V + TLI G+ + E D
Sbjct: 303 KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEID 362
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ +M G+QP++ YN L+ C K D A +++ M +GL + IT
Sbjct: 363 LMKESYQKMLSKGLQPDIVLYNTLVNGFC-KNGDLVAARNIVDGMIRRGLRPDKIT 417
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 104/260 (40%), Gaps = 13/260 (5%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVFNK 222
AL+ A+C + L+D + + G V I LI S+ G+ E + K
Sbjct: 315 ALINALCKENKMDGAHGLFDEMCKRGLIPNDV----IFTTLIHGHSRNGEIDLMKESYQK 370
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
G + Y + + A ++ + MI G PD +I FC+GG
Sbjct: 371 MLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGD 430
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP-- 340
+ A + + + + + L+ +C+E + + E + IKP
Sbjct: 431 VETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERAL-----REMLRAGIKPDD 485
Query: 341 --FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
++ ++ + C+ D LL +M S+G P +N +++ K G M A +L
Sbjct: 486 VTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDA 545
Query: 399 MRSRGLKPDVYTYTGLMSGY 418
M + G+ PD TY L+ G+
Sbjct: 546 MLNIGVVPDDITYNTLLEGH 565
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCA 462
G +VY + LM+ + G + +A ++ +E K + + V+++TLI GYCK+ D
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 463 LKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGI 515
+L ++M+ +P+V Y+ LI +LC K A L ++M +GL N +
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALC-KENKMDGAHGLFDEMCKRGLIPNDV 346
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 153/334 (45%), Gaps = 19/334 (5%)
Query: 163 ALLKAICSSVGKKEVYALWDIVKEI---GEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
++K +CSS ++ ++IVKE+ G + V I LI F + + A V
Sbjct: 422 TVVKGMCSS---GDLDGAYNIVKEMIASGCRP----NVVIYTTLIKTFLQNSRFGDAMRV 474
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
+ + G + Y I LS+ K D A S +M+E G P++ G IS + +
Sbjct: 475 LKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIE 534
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA---LDMLDD-FSGEARK 335
+ A RE + P + + LI+ C++ + ++ M+D G+A+
Sbjct: 535 ASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKT 594
Query: 336 YAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM 395
Y + ++ L + V A+ + +M +G P + +I+ +SK G+M A +
Sbjct: 595 YTV-----LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649
Query: 396 LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCK 455
M GL P+V Y L+ G+ G++E+A E+L+E + VTY T+I GYCK
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709
Query: 456 LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ A +L +EMK G+ P+ Y L+ C
Sbjct: 710 SGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC 743
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 123/268 (45%), Gaps = 5/268 (1%)
Query: 227 GCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEA 286
G + TY I+ L + + D A + +M+ G I K G ++A
Sbjct: 307 GVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKA 366
Query: 287 HVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS--SV 344
++ + P A LI C+E + V+ ++L + + R I P++ +V
Sbjct: 367 KALFDGMIASGLIPQAQAYASLIEGYCRE-KNVRQGYELLVEM--KKRNIVISPYTYGTV 423
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
++ +C D+ GA ++ +MI+ G P ++ ++I + + AM +LK M+ +G+
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGI 483
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
PD++ Y L+ G + +M+EA L E +N + + TY I GY + EF A K
Sbjct: 484 APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADK 543
Query: 465 LLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
+ EM++ GV PN LI C K
Sbjct: 544 YVKEMRECGVLPNKVLCTGLINEYCKKG 571
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 135/309 (43%), Gaps = 13/309 (4%)
Query: 183 IVKEIGEKEKGVLT-VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEA 241
++KE+ KE+G+ + N LI SK + A + + G N TY I
Sbjct: 474 VLKEM--KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISG 531
Query: 242 LSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPP 301
F A ++M E G LP+ +I+ +CK GK EA Y ++ +
Sbjct: 532 YIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGD 591
Query: 302 QSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGA 357
L++ L + D+ +D ++ E R I P + +I ++ ++ A
Sbjct: 592 AKTYTVLMNGLFKNDK-----VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKA 646
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
++ +M+ EG P ++N ++ + ++G++ A E+L M +GL P+ TY ++ G
Sbjct: 647 SSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDG 706
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
Y G + EA + +E K Y TL+ G C+L + + A+ + K G +
Sbjct: 707 YCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASS 765
Query: 478 VDEYNKLIQ 486
+N LI
Sbjct: 766 TAPFNALIN 774
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 149/346 (43%), Gaps = 22/346 (6%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI FSKLG + A +F++ + G N Y + R + A + ++M G
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
P++ II +CK G EA ++ + K + P V L+ C+ ++ +
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAI 752
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG----PPPGNAVFNS 378
+ G A A PF+++I + + +L++++ P + +N
Sbjct: 753 TIFGTNKKGCASSTA--PFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810
Query: 379 VISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNH 438
+I K G++ A E+ M++ L P V TYT L++GY G+ E + +EA
Sbjct: 811 MIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAG 870
Query: 439 SRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKAL----- 493
+ Y +I + K AL L+++M + VD+ KL S C L
Sbjct: 871 IEPDHIMYSVIINAFLKEGMTTKALVLVDQMF---AKNAVDDGCKLSISTCRALLSGFAK 927
Query: 494 --DWRTAEKLLEDM-RLKGLH-----LNGITRALIRAVKELEEDAI 531
+ AEK++E+M RL+ + + I + I + + +E DA+
Sbjct: 928 VGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQRVEADAV 973
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 126/310 (40%), Gaps = 57/310 (18%)
Query: 239 IEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAH-VVYTLAREKK 297
++AL R D W V + M+E + D + +I C+ G + V++ +E +
Sbjct: 193 LDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFR 252
Query: 298 MYPPQSVVAFLI--SSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVH 355
A + S +C+ +K D+L D LC++K +
Sbjct: 253 TATLNVDGALKLKESMICKGLVPLKYTYDVLID------------------GLCKIKRLE 294
Query: 356 GAKTLL-----------------------------------SKMISEGPPPGNAVFNSVI 380
AK+LL +M+S G +++ I
Sbjct: 295 DAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCI 354
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSR 440
SK G M A + M + GL P Y L+ GY + + E+L E KK +
Sbjct: 355 CVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIV 414
Query: 441 LSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEK 500
+SP TY T+++G C + D A ++ EM G +PNV Y LI++ L+ + A +
Sbjct: 415 ISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTF-LQNSRFGDAMR 473
Query: 501 LLEDMRLKGL 510
+L++M+ +G+
Sbjct: 474 VLKEMKEQGI 483
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 102/257 (39%), Gaps = 44/257 (17%)
Query: 248 FDWAWSVCEKMIE-------------------TGSLPDSEKVGKIISWFCKGGKAKEAHV 288
F+ A SV E+MIE G D G + + G +EA
Sbjct: 113 FEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVF 172
Query: 289 VYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDML-DDFSGEARK---YAIKPFSSV 344
V++ + ++ P S L+ +L + + LD+ D + G + + +K + +
Sbjct: 173 VFSSSMGLELVPRLSRCKVLLDALLRWNR-----LDLFWDVYKGMVERNVVFDVKTYHML 227
Query: 345 IRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGL 404
I + CR +V K +L K E A N + A+++ + M +GL
Sbjct: 228 IIAHCRAGNVQLGKDVLFKTEKEFR---TATLN-----------VDGALKLKESMICKGL 273
Query: 405 KPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALK 464
P YTY L+ G ++E+A +L E L TY LI G K D A
Sbjct: 274 VPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKG 333
Query: 465 LLNEMKDVGVQPNVDEY 481
L++EM G+ N+ Y
Sbjct: 334 LVHEMVSHGI--NIKPY 348
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 168/398 (42%), Gaps = 42/398 (10%)
Query: 156 VTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKA 215
V V+ AL+K CS +KE+ L E+ E L + L+ +KL G
Sbjct: 121 VAHAVIVALIKE-CSRC-EKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFL 178
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIIS 275
A+ + + G V Y + AL + + A K+++ G + DS ++
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLL 238
Query: 276 WFCKGGKAKEAHVVYTLAREKKMYPPQSV-VAFLISSLCQ----------EDET------ 318
FC+G ++A V+ + ++ P SV + LI LC+ +D+
Sbjct: 239 GFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQ 298
Query: 319 ------------------VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTL 360
+ A ++ D+ K + ++ +I LCR + A +
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGV 358
Query: 361 LSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYAN 420
KM+ + P +N++I+ Y K G + PA E+L +M R KP+V T+ LM G
Sbjct: 359 CRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418
Query: 421 GGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNV 478
G+ +A +L N LSP V+Y+ LI G C+ + A KLL+ M ++P+
Sbjct: 419 VGKPYKAVHLLKRMLDNG--LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDC 476
Query: 479 DEYNKLIQSLCLKALDWRTAEKLLEDMRLKGLHLNGIT 516
+ +I + C K A L M KG+ L+ +T
Sbjct: 477 LTFTAIINAFC-KQGKADVASAFLGLMLRKGISLDEVT 513
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 144/316 (45%), Gaps = 8/316 (2%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V NEL+ ++GK A + + D G + +Y I+ L R + A+ +
Sbjct: 406 VRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLS 465
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
M PD II+ FCK GKA A L K + + LI +C+
Sbjct: 466 SMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVG 525
Query: 317 ET--VKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNA 374
+T L+ L +++ ++ C++K+ +L K+ G P
Sbjct: 526 KTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKE---ELAMLGKINKLGLVPSVV 582
Query: 375 VFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEA 434
+ +++ ++GD+T + +L+LM+ G P+VY YT +++G G++EEA ++L+
Sbjct: 583 TYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAM 642
Query: 435 KKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL--KA 492
+ + + VTY +++GY + D AL+ + M + G + N Y+ L+Q L K
Sbjct: 643 QDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKG 702
Query: 493 LDWRTAEKLLEDMRLK 508
+D + E + D+ L+
Sbjct: 703 ID-NSEESTVSDIALR 717
Score = 39.7 bits (91), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 101/269 (37%), Gaps = 40/269 (14%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
+I + G+ + A ++ + D G N TY ++ D A M+E G
Sbjct: 622 IINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERG 681
Query: 263 SLPDSEKVGKIISWFC---KGGKAKEAHVVYTLA-REKKMYPPQSV-------------- 304
+ ++ F KG E V +A RE P+ +
Sbjct: 682 YELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETD---PECINELISVVEQLGGCI 738
Query: 305 ---VAFLISSLCQE---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAK 358
FL++ LC+E DE+ L ++L E + K ++ S C K
Sbjct: 739 SGLCIFLVTRLCKEGRTDESNDLVQNVL-----ERGVFLEKAMDIIMESYCSKKKHTKCM 793
Query: 359 TLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEM-LKLMRSRGL--KPDVYTYT-GL 414
L++ ++ G P F VI K GD A E+ ++L+ S G+ K V TY L
Sbjct: 794 ELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTYVECL 853
Query: 415 MSGYANGGQMEEACEILNEAKKNHSRLSP 443
M G G + E+++ + H R P
Sbjct: 854 MEGDETG----DCSEVIDLVDQLHCRERP 878
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 149/337 (44%), Gaps = 21/337 (6%)
Query: 161 VDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEVF 220
+ +LL C S + AL D + E+G K +++ L K A +
Sbjct: 156 LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH----NKASEAVALV 211
Query: 221 NKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL-PDSEKVGKIISWFCK 279
++ GC + TY + L +R D A S+ +KM E G + D II CK
Sbjct: 212 DQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYNTIIDGLCK 270
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKY 336
+A ++T K + P + LIS LC + +L DM++ RK
Sbjct: 271 YKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE------RK- 323
Query: 337 AIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPA 392
I P FS++I + + + A+ L +MI P ++S+I+ + + A
Sbjct: 324 -INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 382
Query: 393 MEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRG 452
M +LM S+ P+V TY+ L+ G+ ++EE E+ E + + VTY TLI G
Sbjct: 383 KHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHG 442
Query: 453 YCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
+ + + D A + +M VGV PN+ YN L+ LC
Sbjct: 443 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 131/291 (45%), Gaps = 1/291 (0%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
N+L++ +K+ K + + + G + TY I RR A +V KM+
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETV 319
+ G PD + +++ +C + +A + E P LI L ++
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
+ A+ ++D + + + +V+ LC+ D+ A +LL KM ++N++
Sbjct: 206 E-AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTI 264
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I K M A+ + M ++G++PDV+TY+ L+S N G+ +A +L++ +
Sbjct: 265 IDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKI 324
Query: 440 RLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
+ VT+ LI + K + A KL +EM + P++ Y+ LI C+
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 375
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 144/318 (45%), Gaps = 2/318 (0%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI+ G+ A + + + N T+ I+A + A + ++MI+
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
PD +I+ FC + EA ++ L K +P + LI C+ + V+
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA-KRVEEG 417
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISA 382
+++ + S ++++I + +D A+ + +M+S G P +N ++
Sbjct: 418 MELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDG 477
Query: 383 YSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLS 442
K G + AM + + ++ ++PD+YTY ++ G G++E+ E+ +
Sbjct: 478 LCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPN 537
Query: 443 PVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLL 502
+ Y+T+I G+C+ + A LL +MK+ G PN YN LI++ L+ D + +L+
Sbjct: 538 VIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRAR-LRDGDREASAELI 596
Query: 503 EDMRLKGLHLNGITRALI 520
++MR G + T L+
Sbjct: 597 KEMRSCGFAGDASTIGLV 614
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 4/222 (1%)
Query: 306 AFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMI 365
+ I+ C+ + + LAL +L + I SS++ C K + A L+ +M+
Sbjct: 122 SIFINCFCRRSQ-LSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 366 SEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQME 425
G P F ++I + A+ ++ M RG +PD+ TY +++G G ++
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 426 EACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLI 485
A +L + +K V Y+T+I G CK + D AL L EM + G++P+V Y+ LI
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 486 QSLCLKALDWRTAEKLLEDMRLKGLHLNGIT-RALIRA-VKE 525
LC W A +LL DM + ++ N +T ALI A VKE
Sbjct: 301 SCLCNYG-RWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 341
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 330 SGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDM 389
SG+ R+ S +I+ V A L M+ P P FN ++SA +K
Sbjct: 47 SGDYREILRNRLSDIIK-------VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF 99
Query: 390 TPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTL 449
+ + + M++ G+ D+YTY+ ++ + Q+ A +L + K VT +L
Sbjct: 100 ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSL 159
Query: 450 IRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCL 490
+ GYC + A+ L+++M ++G +P+ + LI L L
Sbjct: 160 LNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 98/198 (49%), Gaps = 7/198 (3%)
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKY-AIKPFSSVIRSLCRMKDVHGAKTLLSKMISE 367
+S + + D+ V L DM+ ++R + +I F+ ++ ++ +M +L +M +
Sbjct: 58 LSDIIKVDDAVDLFGDMV-----KSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 368 GPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
G ++ I+ + + ++ A+ +L M G +PD+ T + L++GY + ++ +A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQS 487
++++ + + T+ TLI G + A+ L+++M G QP++ Y ++
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 488 LCLKALDWRTAEKLLEDM 505
LC + D A LL+ M
Sbjct: 233 LCKRG-DIDLALSLLKKM 249
>sp|Q8S9D1|PP395_ARATH Pentatricopeptide repeat-containing protein At5g21222
OS=Arabidopsis thaliana GN=ATC401 PE=2 SV=1
Length = 831
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 166/371 (44%), Gaps = 23/371 (6%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
+ +A++ A S + +++ +KE G K T N LI + K+GK + + +
Sbjct: 391 LFNAIINASSESGNLDQAMKIFEKMKESGCKP----TASTFNTLIKGYGKIGKLEESSRL 446
Query: 220 FNK-FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+ D N T ++A ++ + AW++ KM G PD + +
Sbjct: 447 LDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYA 506
Query: 279 KGGKAKEAH-VVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEAR 334
+ G A ++ K+ P +++ C+E +E ++ M +
Sbjct: 507 RIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM--------K 558
Query: 335 KYAIKP----FSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
+ + P F+S+I+ + D+ G ++ M G P F+++++A+S GDM
Sbjct: 559 ELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMK 618
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
E+ M G+ PD++ ++ L GYA G+ E+A +ILN+ +K R + V Y +I
Sbjct: 619 RCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQII 678
Query: 451 RGYCKLEEFDCALKLLNEMKD-VGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
G+C E A+++ +M VG+ PN+ Y LI W+ AE+LL+DM K
Sbjct: 679 SGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWK-AEELLKDMEGKN 737
Query: 510 LHLNGITRALI 520
+ T LI
Sbjct: 738 VVPTRKTMQLI 748
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 152/318 (47%), Gaps = 12/318 (3%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
+++N LI + G+ + A +FN + G + TY + AL+R+K F S+
Sbjct: 323 TKLMNGLI----ERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLIS 378
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLI---SSLC 313
K+ + G PD+ II+ + G +A ++ +E P S LI +
Sbjct: 379 KVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIG 438
Query: 314 QEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGN 373
+ +E+ +L ML D E + + + ++++ C + + A ++ KM S G P
Sbjct: 439 KLEESSRLLDMMLRD---EMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDV 495
Query: 374 AVFNSVISAYSKAGDMTPAMEM-LKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILN 432
FN++ AY++ G A +M + M +KP+V T +++GY G+MEEA
Sbjct: 496 VTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFY 555
Query: 433 EAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
K+ + +++LI+G+ + + D ++++ M++ GV+P+V ++ L+ +
Sbjct: 556 RMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWS-SV 614
Query: 493 LDWRTAEKLLEDMRLKGL 510
D + E++ DM G+
Sbjct: 615 GDMKRCEEIYTDMLEGGI 632
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Query: 407 DVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLL 466
DV + T LM+G G+ +EA I N + + S +TY TL+ + + F L L+
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 467 NEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKG 509
++++ G++P+ +N +I + ++ + A K+ E M+ G
Sbjct: 378 SKVEKNGLKPDTILFNAIINA-SSESGNLDQAMKIFEKMKESG 419
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 142/327 (43%), Gaps = 5/327 (1%)
Query: 159 GVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFE 218
G++ L+ +C + LW G V+ N L+ + GK AF
Sbjct: 484 GLLTTLISGLCKHGKHSKALELWFQFLNKG----FVVDTRTSNALLHGLCEAGKLDEAFR 539
Query: 219 VFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFC 278
+ + GCV ++ +Y I +K D A+ ++M++ G PD+ +I
Sbjct: 540 IQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLF 599
Query: 279 KGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAI 338
K +EA + + M P + +I C+ + T + + D+ + +
Sbjct: 600 NMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE-GQEFFDEMMSKNVQPNT 658
Query: 339 KPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKL 398
++ +IR+ CR + A L M +G P +A + S+I S + A + +
Sbjct: 659 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 718
Query: 399 MRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEE 458
MR GL+P+V+ YT L+ GY GQM + +L E + + +TY +I GY +
Sbjct: 719 MRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGN 778
Query: 459 FDCALKLLNEMKDVGVQPNVDEYNKLI 485
A +LLNEM++ G+ P+ Y + I
Sbjct: 779 VTEASRLLNEMREKGIVPDSITYKEFI 805
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 138/322 (42%), Gaps = 8/322 (2%)
Query: 195 LTVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSV 254
LT N LI + K G+ A + + G NQ ++ I L +FD A
Sbjct: 411 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 470
Query: 255 CEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQ 314
+M+ P + +IS CK GK +A ++ K L+ LC+
Sbjct: 471 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCE 530
Query: 315 E---DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPP 371
DE ++ ++L G ++++I C K + A L +M+ G P
Sbjct: 531 AGKLDEAFRIQKEIL----GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKP 586
Query: 372 GNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEIL 431
N ++ +I + A++ + G+ PDVYTY+ ++ G + EE E
Sbjct: 587 DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF 646
Query: 432 NEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLK 491
+E + + + V Y+ LIR YC+ AL+L +MK G+ PN Y LI+ + +
Sbjct: 647 DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII 706
Query: 492 ALDWRTAEKLLEDMRLKGLHLN 513
+ A+ L E+MR++GL N
Sbjct: 707 S-RVEEAKLLFEEMRMEGLEPN 727
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 142/328 (43%), Gaps = 16/328 (4%)
Query: 196 TVEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVC 255
V + N LI F + G A E+ + G TY I+ + D A +
Sbjct: 377 NVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL 436
Query: 256 EKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLARE-------KKMYPPQSVVAFL 308
++M+ G + +I C +H+++ A + M P ++ L
Sbjct: 437 KEMLSIGFNVNQGSFTSVICLLC-------SHLMFDSALRFVGEMLLRNMSPGGGLLTTL 489
Query: 309 ISSLCQEDETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG 368
IS LC+ + K AL++ F + + ++++ LC + A + +++ G
Sbjct: 490 ISGLCKHGKHSK-ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 548
Query: 369 PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEAC 428
+N++IS + A L M RGLKPD YTY+ L+ G N ++EEA
Sbjct: 549 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAI 608
Query: 429 EILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSL 488
+ ++ K+N TY +I G CK E + + +EM VQPN YN LI++
Sbjct: 609 QFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAY 668
Query: 489 CLKALDWRTAEKLLEDMRLKGLHLNGIT 516
C ++ A +L EDM+ KG+ N T
Sbjct: 669 C-RSGRLSMALELREDMKHKGISPNSAT 695
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 125/279 (44%), Gaps = 12/279 (4%)
Query: 216 AFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEK--MIETGSLPDSEKVGKI 273
A +VF + G ++ T + +L R F CE ++ G PD
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQ---KCCEAFDVVCKGVSPDVYLFTTA 279
Query: 274 ISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSL--C-QEDETVKLALDMLDDFS 330
I+ FCKGGK +EA +++ E + P +I L C + DE M++
Sbjct: 280 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE--- 336
Query: 331 GEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMT 390
+ + +S +++ L R K + A +L +M +G PP V+N++I ++ +AG +
Sbjct: 337 -RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN 395
Query: 391 PAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLI 450
A+E+ LM S+GL TY L+ GY GQ + A +L E ++ ++ ++I
Sbjct: 396 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 455
Query: 451 RGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLC 489
C FD AL+ + EM + P LI LC
Sbjct: 456 CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLC 494
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 135/328 (41%), Gaps = 38/328 (11%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V + I F K GK + A ++F+K + G N T+ I+ L +D A+ E
Sbjct: 273 VYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKE 332
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVV-AFLISSLCQE 315
KM+E G P ++ + + +A+ V KK +PP +V LI S E
Sbjct: 333 KMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLK-EMTKKGFPPNVIVYNNLIDSFI-E 390
Query: 316 DETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEG------- 368
++ A+++ D + ++++I+ C+ A+ LL +M+S G
Sbjct: 391 AGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGS 450
Query: 369 ----------------------------PPPGNAVFNSVISAYSKAGDMTPAMEMLKLMR 400
PG + ++IS K G + A+E+
Sbjct: 451 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL 510
Query: 401 SRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFD 460
++G D T L+ G G+++EA I E + V+Y+TLI G C ++ D
Sbjct: 511 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 570
Query: 461 CALKLLNEMKDVGVQPNVDEYNKLIQSL 488
A L+EM G++P+ Y+ LI L
Sbjct: 571 EAFMFLDEMVKRGLKPDNYTYSILICGL 598
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 156/354 (44%), Gaps = 10/354 (2%)
Query: 160 VVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGKAAFEV 219
V +L++ C AL+D V E G+ + N LI F KLG+ K A E+
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAI----TYNTLIRGFCKLGQLKEASEI 304
Query: 220 FNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCK 279
F + G N TY I+ L A + MIE P++ II+ CK
Sbjct: 305 FEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCK 364
Query: 280 GGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETVKLALDMLDDFSGEARKY 336
G +A + L ++++ P L+ LC + DE KL ML D S
Sbjct: 365 DGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSS--YTDP 422
Query: 337 AIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEML 396
+ ++++I LC+ +H A + ++ + N ++++ KAGD+ AME+
Sbjct: 423 DVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELW 482
Query: 397 KLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKL 456
K + + + TYT ++ G+ G + A +L + + + + S Y+ L+ CK
Sbjct: 483 KQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKE 542
Query: 457 EEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWRTAEKLLEDMRLKGL 510
D A +L EM+ P+V +N +I LKA D ++AE LL M GL
Sbjct: 543 GSLDQAWRLFEEMQRDNNFPDVVSFNIMIDG-SLKAGDIKSAESLLVGMSRAGL 595
Score = 105 bits (263), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 141/306 (46%), Gaps = 8/306 (2%)
Query: 200 LNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMI 259
L+ L+ + ++ K AF V G N + ++ L R A S+ +M
Sbjct: 110 LSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMR 169
Query: 260 ETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQ-SVVAF--LISSLCQED 316
+PD +I FC+G KE LA E K S+V + LI + C+
Sbjct: 170 RNSLMPDVFSYNTVIRGFCEG---KELEKALELANEMKGSGCSWSLVTWGILIDAFCKAG 226
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ + A+ L + + + ++S+IR C ++ K L +++ G P +
Sbjct: 227 KMDE-AMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
N++I + K G + A E+ + M RG++P+VYTYTGL+ G G+ +EA ++LN +
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIE 345
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
+ VTY+ +I CK A++++ MK +P+ YN L+ LC K D
Sbjct: 346 KDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKG-DLD 404
Query: 497 TAEKLL 502
A KLL
Sbjct: 405 EASKLL 410
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 123/252 (48%), Gaps = 9/252 (3%)
Query: 242 LSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPP 301
L R + + A+S KM+ET + + + ++ + + K A V L ++
Sbjct: 82 LVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFN 141
Query: 302 QSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKP----FSSVIRSLCRMKDVHGA 357
L+ LC+ E K A+ +L E R+ ++ P +++VIR C K++ A
Sbjct: 142 VYNHNILLKGLCRNLECGK-AVSLLR----EMRRNSLMPDVFSYNTVIRGFCEGKELEKA 196
Query: 358 KTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
L ++M G + +I A+ KAG M AM LK M+ GL+ D+ YT L+ G
Sbjct: 197 LELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRG 256
Query: 418 YANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPN 477
+ + G+++ + +E + +TY+TLIRG+CKL + A ++ M + GV+PN
Sbjct: 257 FCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPN 316
Query: 478 VDEYNKLIQSLC 489
V Y LI LC
Sbjct: 317 VYTYTGLIDGLC 328
Score = 82.4 bits (202), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 108/506 (21%), Positives = 197/506 (38%), Gaps = 81/506 (16%)
Query: 79 YAQMDPSADAVESKEEEAYEIDGDKLENVLSLLQSSVD----------GYLESSLDSFEL 128
Y+++ + E+K E +L+N +S+ Q +VD + + S
Sbjct: 29 YSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSLAFAGNNLMAKLVRSRNH 88
Query: 129 DLHEDFVLKVLETP-----LVLGENLVCFFKWVTSGVV-------------------DAL 164
+L F K+LET + L L C+ + +G + L
Sbjct: 89 ELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNIL 148
Query: 165 LKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEIL--NELIALFSKLGKGKAAFEVFNK 222
LK +C ++ + +L + E + L ++ N +I F + + + A E+ N+
Sbjct: 149 LKGLCRNLECGKAVSL------LREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANE 202
Query: 223 FGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSLPDSEKVGKIISWFCKGGK 282
GC + T+ I+A + D A ++M G D +I FC G+
Sbjct: 203 MKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGE 262
Query: 283 AKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGEARKYAIKPFS 342
++ E+ P LI C+ + +K A ++ + + + ++
Sbjct: 263 LDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQ-LKEASEIFEFMIERGVRPNVYTYT 321
Query: 343 SVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVISAYSKAGDMTPAMEMLKLMRSR 402
+I LC + A LL+ MI + P +N +I+ K G + A+E+++LM+ R
Sbjct: 322 GLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKR 381
Query: 403 GLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSP--VTYHTLIRGYCK----- 455
+PD TY L+ G G ++EA ++L K+ S P ++Y+ LI G CK
Sbjct: 382 RTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLH 441
Query: 456 --LEEFDC----------------------------ALKLLNEMKDVGVQPNVDEYNKLI 485
L+ +D A++L ++ D + N D Y +I
Sbjct: 442 QALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMI 501
Query: 486 QSLCLKALDWRTAEKLLEDMRLKGLH 511
C + A+ LL MR+ L
Sbjct: 502 DGFCKTGM-LNVAKGLLCKMRVSELQ 526
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 121/316 (38%), Gaps = 46/316 (14%)
Query: 155 WVTSGVVDALLKAICSSVGKKEVYALWDIVKEIGEKEKGVLTVEILNELIALFSKLGKGK 214
+ +G++D L C KE L +++ E E+ V I+N+L K G
Sbjct: 318 YTYTGLIDGL----CGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKL----CKDGLVA 369
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETGSL--PDSEKVGK 272
A E+ + TY + L + D A + M++ S PD
Sbjct: 370 DAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNA 429
Query: 273 IISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLALDMLDDFSGE 332
+I CK + +A +Y L EK + L++S + + K A+++ S
Sbjct: 430 LIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNK-AMELWKQISDS 488
Query: 333 ARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKM-ISEGPP--------------------- 370
++++I C+ ++ AK LL KM +SE P
Sbjct: 489 KIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQA 548
Query: 371 -------------PGNAVFNSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSG 417
P FN +I KAGD+ A +L M GL PD++TY+ L++
Sbjct: 549 WRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINR 608
Query: 418 YANGGQMEEACEILNE 433
+ G ++EA ++
Sbjct: 609 FLKLGYLDEAISFFDK 624
>sp|Q9SSR4|PPR77_ARATH Pentatricopeptide repeat-containing protein At1g52620
OS=Arabidopsis thaliana GN=At1g52620 PE=2 SV=1
Length = 819
Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 142/328 (43%), Gaps = 38/328 (11%)
Query: 197 VEILNELIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCE 256
V N LI K GK + A ++ G + N +Y I+A + K +D A +
Sbjct: 345 VATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLL 404
Query: 257 KMIETGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQED 316
+M E G PD G +I G D
Sbjct: 405 QMAERGCKPDIVTYGILIHGLVVSG--------------------------------HMD 432
Query: 317 ETVKLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVF 376
+ V + + ++D G + AI ++ ++ LC+ AK L S+M+ P V+
Sbjct: 433 DAVNMKVKLID--RGVSPDAAI--YNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVY 488
Query: 377 NSVISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKK 436
++I + ++GD A ++ L +G+K DV + ++ G+ G ++EA +N +
Sbjct: 489 ATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNE 548
Query: 437 NHSRLSPVTYHTLIRGYCKLEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKALDWR 496
H TY T+I GY K ++ A+K+ M+ +PNV Y LI C + D++
Sbjct: 549 EHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQG-DFK 607
Query: 497 TAEKLLEDMRLKGLHLNGIT-RALIRAV 523
AE+ ++M+L+ L N +T LIR++
Sbjct: 608 MAEETFKEMQLRDLVPNVVTYTTLIRSL 635
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 132/297 (44%), Gaps = 14/297 (4%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI + K + A ++ + + GC + TY I L D A ++ K+I+ G
Sbjct: 386 LIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRG 445
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQE---DETV 319
PD+ ++S CK G+ A ++++ ++ + P V A LI + DE
Sbjct: 446 VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEAR 505
Query: 320 KLALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSV 379
K+ ++ + K + +++I+ CR + A +++M E P ++++
Sbjct: 506 KVFSLSVE----KGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTI 561
Query: 380 ISAYSKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEACEILNEAKKNHS 439
I Y K DM A+++ + M KP+V TYT L++G+ G + A E E +
Sbjct: 562 IDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDL 621
Query: 440 RLSPVTYHTLIRGYCK----LEEFDCALKLLNEMKDVGVQPNVDEYNKLIQSLCLKA 492
+ VTY TLIR K LE+ +L+ K V PN +N L+Q K
Sbjct: 622 VPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCV---PNEVTFNCLLQGFVKKT 675
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 132/323 (40%), Gaps = 56/323 (17%)
Query: 215 AAFEVFNKFGDYGCVANQETYYFTIEALSRR--------------KIFDWAWSVCEKMIE 260
A + +FN+ D E T EALS +I+D+ + +
Sbjct: 110 ARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYD---- 165
Query: 261 TGSLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVK 320
S+PD ++S K + +A VY ++ L+ +C E + V+
Sbjct: 166 --SVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGK-VE 222
Query: 321 LALDMLDDFSGEARKYAIKPFSSVIRSLCRMKDVHGAKTLLSKMISEGPPPGNAVFNSVI 380
+ +++ G+ I ++++I C++ D+ A + ++ +G P F ++I
Sbjct: 223 VGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMI 282
Query: 381 SAYSKAGDMTPAMEMLKLMRSRGL-----------------------------------K 405
+ + K GD + +L ++ RGL K
Sbjct: 283 NGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCK 342
Query: 406 PDVYTYTGLMSGYANGGQMEEACEILNEAKKNHSRLSPVTYHTLIRGYCKLEEFDCALKL 465
PDV TY L++ G+ E A L+EA K + ++Y LI+ YCK +E+D A KL
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 466 LNEMKDVGVQPNVDEYNKLIQSL 488
L +M + G +P++ Y LI L
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGL 425
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/267 (19%), Positives = 96/267 (35%), Gaps = 16/267 (5%)
Query: 203 LIALFSKLGKGKAAFEVFNKFGDYGCVANQETYYFTIEALSRRKIFDWAWSVCEKMIETG 262
LI F + G A +VF+ + G + + I+ R + D A + +M E
Sbjct: 491 LIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEH 550
Query: 263 SLPDSEKVGKIISWFCKGGKAKEAHVVYTLAREKKMYPPQSVVAFLISSLCQEDETVKLA 322
+PD II + K A ++ + K P LI+ C + + K+A
Sbjct: 551 LVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGD-FKMA 609
Query: 323 LDMLDDFSGEARKYAIKPFSSVIRSLCR-MKDVHGAKTLLSKMISEGPPPGNAVFNSVIS 381
+ + + ++++IRSL + + A M++ P FN ++
Sbjct: 610 EETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQ 669
Query: 382 AY--------------SKAGDMTPAMEMLKLMRSRGLKPDVYTYTGLMSGYANGGQMEEA 427
+ S G + E M+S G Y + G ++ A
Sbjct: 670 GFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTA 729
Query: 428 CEILNEAKKNHSRLSPVTYHTLIRGYC 454
C ++ K PV++ ++ G+C
Sbjct: 730 CMFQDKMVKKGFSPDPVSFAAILHGFC 756
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 200,413,281
Number of Sequences: 539616
Number of extensions: 8427776
Number of successful extensions: 30830
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 387
Number of HSP's successfully gapped in prelim test: 129
Number of HSP's that attempted gapping in prelim test: 24766
Number of HSP's gapped (non-prelim): 2731
length of query: 540
length of database: 191,569,459
effective HSP length: 122
effective length of query: 418
effective length of database: 125,736,307
effective search space: 52557776326
effective search space used: 52557776326
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)