BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042615
(160 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 100 bits (249), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 86/144 (59%), Gaps = 2/144 (1%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L DQ+++ ++ F+ FD D D P+ ++ ++ +DA+GNG +
Sbjct: 5 LTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
+F E +N + M +T ++E+L E FR FD+D NG+I+AAEL M +G+ LT +E+
Sbjct: 65 DFPEFLNLMARKMKDTD--SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEV 122
Query: 124 TEMIKEADTNGDGVISFNEFAAVM 147
EMI+EAD +GDG I+++EF VM
Sbjct: 123 DEMIREADVDGDGQINYDEFVKVM 146
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%)
Query: 86 QLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAA 145
+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I F EF
Sbjct: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 71
Query: 146 VMAKSTLD 153
+MA+ D
Sbjct: 72 LMARKMKD 79
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 99.8 bits (247), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 84/141 (59%), Gaps = 2/141 (1%)
Query: 7 DQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAVEFD 66
DQ+++ ++ F+ FD D D P+ ++ ++ +DA+GNG ++F
Sbjct: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
Query: 67 ELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEM 126
E +N + M +T ++E+L E FR FD+D NG+I+AAEL M +G+ LT +E+ EM
Sbjct: 68 EFLNLMARKMKDTD--SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEM 125
Query: 127 IKEADTNGDGVISFNEFAAVM 147
I+EAD +GDG I++ EF VM
Sbjct: 126 IREADVDGDGQINYEEFVKVM 146
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%)
Query: 86 QLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAA 145
+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I F EF
Sbjct: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 71
Query: 146 VMAKSTLD 153
+MA+ D
Sbjct: 72 LMARKMKD 79
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 99.8 bits (247), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 84/141 (59%), Gaps = 2/141 (1%)
Query: 7 DQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAVEFD 66
+Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG ++F
Sbjct: 4 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 63
Query: 67 ELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEM 126
E +N + M +T ++E+L E FR FD+DGNG+I+AAEL M +G+ LT +E+ EM
Sbjct: 64 EFLNLMARKMKDTD--SEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 121
Query: 127 IKEADTNGDGVISFNEFAAVM 147
I+EAD +GDG +++ EF VM
Sbjct: 122 IREADVDGDGQVNYEEFVQVM 142
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%)
Query: 86 QLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAA 145
+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I F EF
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 67
Query: 146 VMAKSTLD 153
+MA+ D
Sbjct: 68 LMARKMKD 75
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 99.4 bits (246), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 85/144 (59%), Gaps = 2/144 (1%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG +
Sbjct: 4 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
+F E +N + M +T ++E+L E FR FD+DGNG+I+AAEL M +G+ LT +E+
Sbjct: 64 DFPEFLNLMARKMKDTD--SEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 121
Query: 124 TEMIKEADTNGDGVISFNEFAAVM 147
EMI+EAD +GDG +++ EF VM
Sbjct: 122 DEMIREADVDGDGQVNYEEFVQVM 145
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%)
Query: 86 QLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAA 145
+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I F EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 146 VMAKSTLD 153
+MA+ D
Sbjct: 71 LMARKMKD 78
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 99.4 bits (246), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 85/144 (59%), Gaps = 2/144 (1%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG +
Sbjct: 4 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
+F E +N + M +T ++E+L E FR FD+DGNG+I+AAEL M +G+ LT +E+
Sbjct: 64 DFPEFLNLMARKMKDTD--SEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 121
Query: 124 TEMIKEADTNGDGVISFNEFAAVM 147
EMI+EAD +GDG +++ EF VM
Sbjct: 122 DEMIREADVDGDGQVNYEEFVQVM 145
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%)
Query: 86 QLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAA 145
+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I F EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 146 VMAKSTLD 153
+MA+ D
Sbjct: 71 LMARKMKD 78
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 97.4 bits (241), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 83/142 (58%), Gaps = 2/142 (1%)
Query: 7 DQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAVEFD 66
+Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG ++F
Sbjct: 308 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 367
Query: 67 ELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEM 126
E + + M +T ++E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+ EM
Sbjct: 368 EFLTMMARKMKDTD--SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 425
Query: 127 IKEADTNGDGVISFNEFAAVMA 148
I+EAD +GDG +++ EF +M
Sbjct: 426 IREADIDGDGQVNYEEFVQMMT 447
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 139 SFNEFAAVMAKSTLD 153
F EF +MA+ D
Sbjct: 365 DFPEFLTMMARKMKD 379
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 97.1 bits (240), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 83/142 (58%), Gaps = 2/142 (1%)
Query: 7 DQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAVEFD 66
+Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG ++F
Sbjct: 309 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 368
Query: 67 ELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEM 126
E + + M +T ++E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+ EM
Sbjct: 369 EFLTMMARKMKDTD--SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 426
Query: 127 IKEADTNGDGVISFNEFAAVMA 148
I+EAD +GDG +++ EF +M
Sbjct: 427 IREADIDGDGQVNYEEFVQMMT 448
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 306 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 365
Query: 139 SFNEFAAVMAKSTLD 153
F EF +MA+ D
Sbjct: 366 DFPEFLTMMARKMKD 380
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 97.1 bits (240), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 83/142 (58%), Gaps = 2/142 (1%)
Query: 7 DQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAVEFD 66
+Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG ++F
Sbjct: 308 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 367
Query: 67 ELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEM 126
E + + M +T ++E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+ EM
Sbjct: 368 EFLTMMARKMKDTD--SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 425
Query: 127 IKEADTNGDGVISFNEFAAVMA 148
I+EAD +GDG +++ EF +M
Sbjct: 426 IREADIDGDGQVNYEEFVQMMT 447
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 139 SFNEFAAVMAKSTLD 153
F EF +MA+ D
Sbjct: 365 DFPEFLTMMARKMKD 379
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 97.1 bits (240), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 83/142 (58%), Gaps = 2/142 (1%)
Query: 7 DQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAVEFD 66
+Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG ++F
Sbjct: 274 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 333
Query: 67 ELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEM 126
E + + M +T ++E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+ EM
Sbjct: 334 EFLTMMARKMKDTD--SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 391
Query: 127 IKEADTNGDGVISFNEFAAVMA 148
I+EAD +GDG +++ EF +M
Sbjct: 392 IREADIDGDGQVNYEEFVQMMT 413
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 330
Query: 139 SFNEFAAVMAKSTLD 153
F EF +MA+ D
Sbjct: 331 DFPEFLTMMARKMKD 345
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 97.1 bits (240), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 83/142 (58%), Gaps = 2/142 (1%)
Query: 7 DQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAVEFD 66
+Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG ++F
Sbjct: 271 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 330
Query: 67 ELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEM 126
E + + M +T ++E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+ EM
Sbjct: 331 EFLTMMARKMKDTD--SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 388
Query: 127 IKEADTNGDGVISFNEFAAVMA 148
I+EAD +GDG +++ EF +M
Sbjct: 389 IREADIDGDGQVNYEEFVQMMT 410
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 268 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 327
Query: 139 SFNEFAAVMAKSTLD 153
F EF +MA+ D
Sbjct: 328 DFPEFLTMMARKMKD 342
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 97.1 bits (240), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 83/142 (58%), Gaps = 2/142 (1%)
Query: 7 DQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAVEFD 66
+Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG ++F
Sbjct: 274 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 333
Query: 67 ELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEM 126
E + + M +T ++E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+ EM
Sbjct: 334 EFLTMMARKMKDTD--SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 391
Query: 127 IKEADTNGDGVISFNEFAAVMA 148
I+EAD +GDG +++ EF +M
Sbjct: 392 IREADIDGDGQVNYEEFVQMMT 413
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 330
Query: 139 SFNEFAAVMAKSTLD 153
F EF +MA+ D
Sbjct: 331 DFPEFLTMMARKMKD 345
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 97.1 bits (240), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG +
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
+F E + + M +T ++E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+
Sbjct: 62 DFPEFLTMMARKMKDTD--SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 119
Query: 124 TEMIKEADTNGDGVISFNEFAAVMA 148
EMI+EAD +GDG +++ EF +M
Sbjct: 120 DEMIREADIDGDGQVNYEEFVQMMT 144
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 139 SFNEFAAVMAKSTLD 153
F EF +MA+ D
Sbjct: 62 DFPEFLTMMARKMKD 76
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 96.7 bits (239), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG +
Sbjct: 3 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 62
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
+F E + + M +T ++E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+
Sbjct: 63 DFPEFLTMMARKMKDTD--SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 120
Query: 124 TEMIKEADTNGDGVISFNEFAAVMA 148
EMI+EAD +GDG +++ EF +M
Sbjct: 121 DEMIREADIDGDGQVNYEEFVQMMT 145
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 3 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 62
Query: 139 SFNEFAAVMAKSTLD 153
F EF +MA+ D
Sbjct: 63 DFPEFLTMMARKMKD 77
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 96.7 bits (239), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
+F E + + M +T ++E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+
Sbjct: 65 DFPEFLTMMARKMKDTD--SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 122
Query: 124 TEMIKEADTNGDGVISFNEFAAVMA 148
EMI+EAD +GDG +++ EF +M
Sbjct: 123 DEMIREADIDGDGQVNYEEFVQMMT 147
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 139 SFNEFAAVMAKSTLD 153
F EF +MA+ D
Sbjct: 65 DFPEFLTMMARKMKD 79
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 96.7 bits (239), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG +
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
+F E + + M +T ++E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+
Sbjct: 61 DFPEFLTMMARKMKDTD--SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 118
Query: 124 TEMIKEADTNGDGVISFNEFAAVMA 148
EMI+EAD +GDG +++ EF +M
Sbjct: 119 DEMIREADIDGDGQVNYEEFVQMMT 143
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 139 SFNEFAAVMAKSTLD 153
F EF +MA+ D
Sbjct: 61 DFPEFLTMMARKMKD 75
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 96.7 bits (239), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
+F E + + M +T ++E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+
Sbjct: 65 DFPEFLTMMARKMKDTD--SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 122
Query: 124 TEMIKEADTNGDGVISFNEFAAVMA 148
EMI+EAD +GDG +++ EF +M
Sbjct: 123 DEMIREADIDGDGQVNYEEFVQMMT 147
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 139 SFNEFAAVMAKSTLD 153
F EF +MA+ D
Sbjct: 65 DFPEFLTMMARKMKD 79
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 96.7 bits (239), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
+F E + + M +T ++E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+
Sbjct: 65 DFPEFLTMMARKMKDTD--SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 122
Query: 124 TEMIKEADTNGDGVISFNEFAAVMA 148
EMI+EAD +GDG +++ EF +M
Sbjct: 123 DEMIREADIDGDGQVNYEEFVQMMT 147
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 139 SFNEFAAVMAKSTLD 153
F EF +MA+ D
Sbjct: 65 DFPEFLTMMARKMKD 79
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 96.7 bits (239), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG +
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
+F E + + M +T ++E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+
Sbjct: 62 DFPEFLTMMARKMKDTD--SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 119
Query: 124 TEMIKEADTNGDGVISFNEFAAVMA 148
EMI+EAD +GDG +++ EF +M
Sbjct: 120 DEMIREADIDGDGQVNYEEFVQMMT 144
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 139 SFNEFAAVMAKSTLD 153
F EF +MA+ D
Sbjct: 62 DFPEFLTMMARKMKD 76
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 96.7 bits (239), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG +
Sbjct: 6 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 65
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
+F E + + M +T ++E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+
Sbjct: 66 DFPEFLTMMARKMKDTD--SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 123
Query: 124 TEMIKEADTNGDGVISFNEFAAVMA 148
EMI+EAD +GDG +++ EF +M
Sbjct: 124 DEMIREADIDGDGQVNYEEFVQMMT 148
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 6 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 65
Query: 139 SFNEFAAVMAKSTLD 153
F EF +MA+ D
Sbjct: 66 DFPEFLTMMARKMKD 80
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 96.7 bits (239), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 85/144 (59%), Gaps = 2/144 (1%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ +++ +D +GNG V
Sbjct: 4 LTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTV 63
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
+F E + + M +T N+E++ E FR FD+DGNG+++AAEL M ++G+ L+ +E+
Sbjct: 64 DFPEFLGMMARKMKDTD--NEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEV 121
Query: 124 TEMIKEADTNGDGVISFNEFAAVM 147
EMI+ ADT+GDG +++ EF V+
Sbjct: 122 DEMIRAADTDGDGQVNYEEFVRVL 145
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +M+ E D +G+G +
Sbjct: 4 LTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTV 63
Query: 139 SFNEFAAVMAKSTLD 153
F EF +MA+ D
Sbjct: 64 DFPEFLGMMARKMKD 78
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 96.7 bits (239), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG +
Sbjct: 10 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 69
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
+F E + + M +T ++E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+
Sbjct: 70 DFPEFLTMMARKMKDTD--SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 127
Query: 124 TEMIKEADTNGDGVISFNEFAAVMA 148
EMI+EAD +GDG +++ EF +M
Sbjct: 128 DEMIREADIDGDGQVNYEEFVQMMT 152
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 10 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 69
Query: 139 SFNEFAAVMAKSTLD 153
F EF +MA+ D
Sbjct: 70 DFPEFLTMMARKMKD 84
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 96.7 bits (239), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
+F E + + M +T ++E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+
Sbjct: 64 DFPEFLTMMARKMKDTD--SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 121
Query: 124 TEMIKEADTNGDGVISFNEFAAVMA 148
EMI+EAD +GDG +++ EF +M
Sbjct: 122 DEMIREADIDGDGQVNYEEFVQMMT 146
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 139 SFNEFAAVMAKSTLD 153
F EF +MA+ D
Sbjct: 64 DFPEFLTMMARKMKD 78
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 96.7 bits (239), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
+F E + + M +T ++E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+
Sbjct: 64 DFPEFLTMMARKMKDTD--SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 121
Query: 124 TEMIKEADTNGDGVISFNEFAAVMA 148
EMI+EAD +GDG +++ EF +M
Sbjct: 122 DEMIREADIDGDGQVNYEEFVQMMT 146
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 139 SFNEFAAVMAKSTLD 153
F EF +MA+ D
Sbjct: 64 DFPEFLTMMARKMKD 78
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 96.7 bits (239), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
+F E + + M +T ++E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+
Sbjct: 65 DFPEFLTMMARKMKDTD--SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 122
Query: 124 TEMIKEADTNGDGVISFNEFAAVMA 148
EMI+EAD +GDG +++ EF +M
Sbjct: 123 DEMIREADIDGDGQVNYEEFVQMMT 147
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 139 SFNEFAAVMAKSTLD 153
F EF +MA+ D
Sbjct: 65 DFPEFLTMMARKMKD 79
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 96.7 bits (239), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG +
Sbjct: 8 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 67
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
+F E + + M +T ++E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+
Sbjct: 68 DFPEFLTMMARKMKDTD--SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 125
Query: 124 TEMIKEADTNGDGVISFNEFAAVMA 148
EMI+EAD +GDG +++ EF +M
Sbjct: 126 DEMIREADIDGDGQVNYEEFVQMMT 150
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 8 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 67
Query: 139 SFNEFAAVMAKSTLD 153
F EF +MA+ D
Sbjct: 68 DFPEFLTMMARKMKD 82
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 96.7 bits (239), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 83/142 (58%), Gaps = 2/142 (1%)
Query: 7 DQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAVEFD 66
+Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG ++F
Sbjct: 3 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 62
Query: 67 ELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEM 126
E + + M +T ++E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+ EM
Sbjct: 63 EFLTMMARKMKDTD--SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 120
Query: 127 IKEADTNGDGVISFNEFAAVMA 148
I+EAD +GDG +++ EF +M
Sbjct: 121 IREADIDGDGQVNYEEFVQMMT 142
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%)
Query: 86 QLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAA 145
+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I F EF
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 66
Query: 146 VMAKSTLD 153
+MA+ D
Sbjct: 67 MMARKMKD 74
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 96.7 bits (239), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 83/142 (58%), Gaps = 2/142 (1%)
Query: 7 DQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAVEFD 66
+Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG ++F
Sbjct: 5 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 64
Query: 67 ELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEM 126
E + + M +T ++E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+ EM
Sbjct: 65 EFLTMMARKMKDTD--SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 122
Query: 127 IKEADTNGDGVISFNEFAAVMA 148
I+EAD +GDG +++ EF +M
Sbjct: 123 IREADIDGDGQVNYEEFVQMMT 144
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%)
Query: 86 QLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAA 145
+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I F EF
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
Query: 146 VMAKSTLD 153
+MA+ D
Sbjct: 69 MMARKMKD 76
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 96.3 bits (238), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
+F E + + M +T ++E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+
Sbjct: 65 DFPEFLTMMARKMKDTD--SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEV 122
Query: 124 TEMIKEADTNGDGVISFNEFAAVMA 148
EMI+EAD +GDG +++ EF +M
Sbjct: 123 DEMIREADIDGDGQVNYEEFVQMMT 147
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 139 SFNEFAAVMAKSTLD 153
F EF +MA+ D
Sbjct: 65 DFPEFLTMMARKMKD 79
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 96.3 bits (238), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
+F E + + M +T ++E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+
Sbjct: 64 DFPEFLTMMARKMKDTD--SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEV 121
Query: 124 TEMIKEADTNGDGVISFNEFAAVMA 148
EMI+EAD +GDG +++ EF +M
Sbjct: 122 DEMIREADIDGDGQVNYEEFVQMMT 146
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 139 SFNEFAAVMAKSTLD 153
F EF +MA+ D
Sbjct: 64 DFPEFLTMMARKMKD 78
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 96.3 bits (238), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 83/142 (58%), Gaps = 2/142 (1%)
Query: 7 DQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAVEFD 66
+Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG ++F
Sbjct: 308 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 367
Query: 67 ELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEM 126
E + + M +T ++E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+ EM
Sbjct: 368 EFLTMMARWMKDTD--SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 425
Query: 127 IKEADTNGDGVISFNEFAAVMA 148
I+EAD +GDG +++ EF +M
Sbjct: 426 IREADIDGDGQVNYEEFVQMMT 447
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 139 SFNEFAAVMAKSTLD 153
F EF +MA+ D
Sbjct: 365 DFPEFLTMMARWMKD 379
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 95.9 bits (237), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 82/142 (57%), Gaps = 2/142 (1%)
Query: 7 DQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAVEFD 66
+Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG ++F
Sbjct: 308 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 367
Query: 67 ELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEM 126
E + + M T ++E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+ EM
Sbjct: 368 EFLTMMARKMKYTD--SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 425
Query: 127 IKEADTNGDGVISFNEFAAVMA 148
I+EAD +GDG +++ EF +M
Sbjct: 426 IREADIDGDGQVNYEEFVQMMT 447
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 139 SFNEFAAVMAKS 150
F EF +MA+
Sbjct: 365 DFPEFLTMMARK 376
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
+F E + + M +T ++E++ E FR FD+DGNG+I+AAEL M +G+ LT +E+
Sbjct: 65 DFPEFLTMMARKMKDTD--SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 122
Query: 124 TEMIKEADTNGDGVISFNEFAAVMA 148
EMI+EAD +GDG +++ EF +M
Sbjct: 123 DEMIREADIDGDGQVNYEEFVTMMT 147
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 139 SFNEFAAVMAKSTLD 153
F EF +MA+ D
Sbjct: 65 DFPEFLTMMARKMKD 79
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
+F E + + M +T ++E++ E FR FD+DGNG+I+AAEL M +G+ LT +E+
Sbjct: 65 DFPEFLTMMARKMKDTD--SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 122
Query: 124 TEMIKEADTNGDGVISFNEFAAVMA 148
EMI+EAD +GDG +++ EF +M
Sbjct: 123 DEMIREADIDGDGQVNYEEFVTMMT 147
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 139 SFNEFAAVMAKSTLD 153
F EF +MA+ D
Sbjct: 65 DFPEFLTMMARKMKD 79
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
+F E + + M +T ++E++ E FR FD+DGNG+I+AAEL M +G+ LT +E+
Sbjct: 64 DFPEFLTMMARKMKDTD--SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 121
Query: 124 TEMIKEADTNGDGVISFNEFAAVMA 148
EMI+EAD +GDG +++ EF +M
Sbjct: 122 DEMIREADIDGDGQVNYEEFVTMMT 146
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 139 SFNEFAAVMAKSTLD 153
F EF +MA+ D
Sbjct: 64 DFPEFLTMMARKMKD 78
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
+F E + + M +T ++E++ E FR FD+DGNG+I+AAEL M +G+ LT +E+
Sbjct: 64 DFPEFLTMMARKMKDTD--SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 121
Query: 124 TEMIKEADTNGDGVISFNEFAAVMA 148
EMI+EAD +GDG +++ EF +M
Sbjct: 122 DEMIREADIDGDGQVNYEEFVTMMT 146
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 139 SFNEFAAVMAKSTLD 153
F EF +MA+ D
Sbjct: 64 DFPEFLTMMARKMKD 78
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
+F E + + M +T ++E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+
Sbjct: 65 DFPEFLTMMARKMKDTD--SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 122
Query: 124 TEMIKEADTNGDGVISFNEFAAVMA 148
+MI+EAD +GDG +++ EF +M
Sbjct: 123 DQMIREADIDGDGQVNYEEFVQMMT 147
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 139 SFNEFAAVMAKSTLD 153
F EF +MA+ D
Sbjct: 65 DFPEFLTMMARKMKD 79
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 82/141 (58%), Gaps = 2/141 (1%)
Query: 7 DQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAVEFD 66
+Q+ + ++ FA FD D D P+ ++ ++ +DA+GNG ++F
Sbjct: 7 EQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 67 ELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEM 126
E ++ + M E ++E+L+E F+ FDRDGNG I+AAEL M +G+ LT E+ EM
Sbjct: 67 EFLSLMARKMKEQD--SEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEM 124
Query: 127 IKEADTNGDGVISFNEFAAVM 147
I+EAD +GDG I++ EF +M
Sbjct: 125 IREADIDGDGHINYEEFVRMM 145
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 4 LTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 139 SFNEFAAVMAKS 150
F EF ++MA+
Sbjct: 64 DFPEFLSLMARK 75
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 82/141 (58%), Gaps = 2/141 (1%)
Query: 7 DQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAVEFD 66
+Q+ + ++ FA FD D D P+ ++ ++ +DA+GNG ++F
Sbjct: 7 EQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 67 ELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEM 126
E ++ + M E ++E+L+E F+ FDRDGNG I+AAEL M +G+ LT E+ EM
Sbjct: 67 EFLSLMARKMKEQD--SEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEM 124
Query: 127 IKEADTNGDGVISFNEFAAVM 147
I+EAD +GDG I++ EF +M
Sbjct: 125 IREADIDGDGHINYEEFVRMM 145
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 4 LTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 139 SFNEFAAVMAKS 150
F EF ++MA+
Sbjct: 64 DFPEFLSLMARK 75
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 95.1 bits (235), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 83/142 (58%), Gaps = 2/142 (1%)
Query: 7 DQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAVEFD 66
+Q+ + ++ F+ FD D D P+ ++ ++ +DA+G+G ++F
Sbjct: 307 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFP 366
Query: 67 ELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEM 126
E + + M +T ++E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+ EM
Sbjct: 367 EFLTMMARKMKDTD--SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 424
Query: 127 IKEADTNGDGVISFNEFAAVMA 148
I+EAD +GDG +++ EF +M
Sbjct: 425 IREADIDGDGQVNYEEFVQMMT 446
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +GDG I
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
Query: 139 SFNEFAAVMAKSTLD 153
F EF +MA+ D
Sbjct: 364 DFPEFLTMMARKMKD 378
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 84/144 (58%), Gaps = 2/144 (1%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ ++ F FD D D P+ +++ +++ +DA+GNG +
Sbjct: 4 LSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTI 63
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
EFDE ++ + + +T +E+L E F+ FD+D NGYI+A+EL M +G+ LT +E+
Sbjct: 64 EFDEFLSLMAKKVKDTDA--EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEV 121
Query: 124 TEMIKEADTNGDGVISFNEFAAVM 147
+MIKEAD +GDG +++ EF +M
Sbjct: 122 EQMIKEADLDGDGQVNYEEFVKMM 145
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 81 LINQEQLL---EIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGV 137
++++EQ++ E F FD+DG+G IT ELA + + Q T +EL +MI E D +G+G
Sbjct: 3 ILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGT 62
Query: 138 ISFNEFAAVMAKSTLD 153
I F+EF ++MAK D
Sbjct: 63 IEFDEFLSLMAKKVKD 78
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 82/142 (57%), Gaps = 3/142 (2%)
Query: 7 DQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAVEFD 66
+Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG ++F
Sbjct: 3 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 62
Query: 67 ELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEM 126
E + + M +T + E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+ EM
Sbjct: 63 EFLTMMARKMKDT---DSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 119
Query: 127 IKEADTNGDGVISFNEFAAVMA 148
I+EA+ +GDG +++ EF +M
Sbjct: 120 IREANIDGDGQVNYEEFVQMMT 141
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%)
Query: 86 QLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAA 145
+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I F EF
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 66
Query: 146 VMAKSTLD 153
+MA+ D
Sbjct: 67 MMARKMKD 74
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
+F E + + M +T ++E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+
Sbjct: 64 DFPEFLTMMARKMKDTD--SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 121
Query: 124 TEMIKEADTNGDGVISFNEFAAVMA 148
EMI+EA+ +GDG +++ EF +M
Sbjct: 122 DEMIREANIDGDGQVNYEEFVQMMT 146
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 139 SFNEFAAVMAKSTLD 153
F EF +MA+ D
Sbjct: 64 DFPEFLTMMARKMKD 78
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ ++ +DA+G+G +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 63
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
+F E + + M +T ++E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+
Sbjct: 64 DFPEFLTMMARKMKDTD--SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 121
Query: 124 TEMIKEADTNGDGVISFNEFAAVMA 148
EMI+EAD +GDG +++ EF +M
Sbjct: 122 DEMIREADIDGDGQVNYEEFVQMMT 146
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +GDG I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 63
Query: 139 SFNEFAAVMAKSTLD 153
F EF +MA+ D
Sbjct: 64 DFPEFLTMMARKMKD 78
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 94.4 bits (233), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
+F E + + M +T ++E++ E FR FD+DGNG+I+AAEL M +G+ LT +E+
Sbjct: 65 DFPEFLTMMARKMKDTD--SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 122
Query: 124 TEMIKEADTNGDGVISFNEFAAVMA 148
EMI+E+D +GDG +++ EF +M
Sbjct: 123 DEMIRESDIDGDGQVNYEEFVTMMT 147
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 139 SFNEFAAVMAKSTLD 153
F EF +MA+ D
Sbjct: 65 DFPEFLTMMARKMKD 79
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 94.4 bits (233), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 83/145 (57%), Gaps = 4/145 (2%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
+F E + + M ++ +E++ E FR FD+DGNG+I+AAEL M +G+ LT +E+
Sbjct: 64 DFPEFLTMMARKMKDS----EEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 119
Query: 124 TEMIKEADTNGDGVISFNEFAAVMA 148
EMI+EAD +GDG +++ EF +M
Sbjct: 120 DEMIREADIDGDGQVNYEEFVTMMT 144
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 139 SFNEFAAVMAKSTLD 153
F EF +MA+ D
Sbjct: 64 DFPEFLTMMARKMKD 78
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 94.4 bits (233), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 82/142 (57%), Gaps = 2/142 (1%)
Query: 7 DQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAVEFD 66
+Q+ + ++ F+ FD D D P+ ++ ++ +DA+G+G ++F
Sbjct: 307 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFP 366
Query: 67 ELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEM 126
E + + M T ++E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+ EM
Sbjct: 367 EFLTMMARKMKYTD--SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 424
Query: 127 IKEADTNGDGVISFNEFAAVMA 148
I+EAD +GDG +++ EF +M
Sbjct: 425 IREADIDGDGQVNYEEFVQMMT 446
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 73 LPDMDETILINQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKE 129
LPD + +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E
Sbjct: 300 LPDQ-----LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE 354
Query: 130 ADTNGDGVISFNEFAAVMAKS 150
D +GDG I F EF +MA+
Sbjct: 355 VDADGDGTIDFPEFLTMMARK 375
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 94.0 bits (232), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 82/142 (57%), Gaps = 2/142 (1%)
Query: 7 DQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAVEFD 66
+Q+ + ++ F+ FD D D P+ ++ ++ +DA+G+G ++F
Sbjct: 308 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFP 367
Query: 67 ELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEM 126
E + + M T ++E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+ EM
Sbjct: 368 EFLTMMARKMKYTD--SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 425
Query: 127 IKEADTNGDGVISFNEFAAVMA 148
I+EAD +GDG +++ EF +M
Sbjct: 426 IREADIDGDGQVNYEEFVQMMT 447
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +GDG I
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 364
Query: 139 SFNEFAAVMAKS 150
F EF +MA+
Sbjct: 365 DFPEFLTMMARK 376
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 94.0 bits (232), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 82/142 (57%), Gaps = 2/142 (1%)
Query: 7 DQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAVEFD 66
+Q+ + ++ F+ FD D D P+ ++ ++ +DA+G+G ++F
Sbjct: 307 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFP 366
Query: 67 ELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEM 126
E + + M T ++E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+ EM
Sbjct: 367 EFLTMMARKMKYTD--SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 424
Query: 127 IKEADTNGDGVISFNEFAAVMA 148
I+EAD +GDG +++ EF +M
Sbjct: 425 IREADIDGDGQVNYEEFVQMMT 446
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 73 LPDMDETILINQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKE 129
LPD + +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E
Sbjct: 300 LPDQ-----LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE 354
Query: 130 ADTNGDGVISFNEFAAVMAKS 150
D +GDG I F EF +MA+
Sbjct: 355 VDADGDGTIDFPEFLTMMARK 375
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 93.6 bits (231), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 83/142 (58%), Gaps = 2/142 (1%)
Query: 7 DQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAVEFD 66
+Q+ + ++ F+ FD D D P+ ++ ++ +DA+G+G ++F
Sbjct: 299 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFP 358
Query: 67 ELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEM 126
E + + M +T ++E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+ EM
Sbjct: 359 EFLIMMARKMKDTD--SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 416
Query: 127 IKEADTNGDGVISFNEFAAVMA 148
I+EAD +GDG +++ EF +M
Sbjct: 417 IREADIDGDGQVNYEEFVQMMT 438
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 55/108 (50%), Gaps = 7/108 (6%)
Query: 49 HVLLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLEI---FRAFDRDGNGYITAA 105
H + ++ NGAV + P D+ + +EQ+ E F FD+DG+G IT
Sbjct: 267 HAQVRGVNFPSNGAV-MQKKTKGWEPTRDQ---LTEEQIAEFKEAFSLFDKDGDGTITTK 322
Query: 106 ELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMAKSTLD 153
EL M +GQ T EL +MI E D +GDG I F EF +MA+ D
Sbjct: 323 ELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKD 370
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 78/140 (55%), Gaps = 2/140 (1%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ + +DA+GNG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTI 63
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
+F E + +T ++E++ E FR FD+DGNGYI+AAEL +G+ LT +E+
Sbjct: 64 DFPEFLTXXARKXKDTD--SEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEV 121
Query: 124 TEMIKEADTNGDGVISFNEF 143
E I+EAD +GDG +++ EF
Sbjct: 122 DEXIREADIDGDGQVNYEEF 141
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 35/68 (51%)
Query: 86 QLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAA 145
+ E F FD+DG+G IT EL +GQ T EL + I E D +G+G I F EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLT 70
Query: 146 VMAKSTLD 153
A+ D
Sbjct: 71 XXARKXKD 78
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 81/150 (54%), Gaps = 2/150 (1%)
Query: 1 MGGLHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGN 60
M L +Q+ + +D F +FD + P+ ++ L+A + N N
Sbjct: 1 MSELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNN 60
Query: 61 GAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTY 120
G + F E + M ET +E++ E F+ FDRDG+G+I+ AEL M +G+ +T
Sbjct: 61 GQLNFTEFCGIMAKQMRETD--TEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTD 118
Query: 121 KELTEMIKEADTNGDGVISFNEFAAVMAKS 150
+E+ EMI+EAD +GDG+I++ EF ++++
Sbjct: 119 EEIDEMIREADFDGDGMINYEEFVWMISQK 148
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 80/142 (56%), Gaps = 2/142 (1%)
Query: 7 DQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAVEFD 66
+Q+ + ++ F+ FD D D P+ ++ ++ + A+GNG ++F
Sbjct: 308 EQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDFP 367
Query: 67 ELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEM 126
+ + + M +T ++E++ E FR F +DGNGYI+AA+L M +G+ LT +E+ EM
Sbjct: 368 QFLTMMARKMKDTD--SEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEM 425
Query: 127 IKEADTNGDGVISFNEFAAVMA 148
I+EA +GDG +++ +F +M
Sbjct: 426 IREAGIDGDGQVNYEQFVQMMT 447
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT +L M +GQ T EL +MI E +G+G I
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTI 364
Query: 139 SFNEFAAVMAKSTLD 153
F +F +MA+ D
Sbjct: 365 DFPQFLTMMARKMKD 379
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 77/140 (55%), Gaps = 2/140 (1%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ + +DA+GNG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTI 63
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
F E + +T ++E++ E FR FD+DGNGYI+AAEL +G+ LT +E+
Sbjct: 64 NFPEFLTXXARCXKDTD--SEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEV 121
Query: 124 TEMIKEADTNGDGVISFNEF 143
E I+EAD +GDG +++ EF
Sbjct: 122 DEXIREADIDGDGQVNYEEF 141
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL +G T EL + I E D +G+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTI 63
Query: 139 SFNEFAAVMAKSTLD 153
+F EF A+ D
Sbjct: 64 NFPEFLTXXARCXKD 78
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 78/140 (55%), Gaps = 2/140 (1%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ + +DA+GNG +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTI 64
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
+F E + +T ++E++ E FR FD+DGNGYI+AAEL +G+ LT +E+
Sbjct: 65 DFPEFLTXXARKXKDTD--SEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEV 122
Query: 124 TEMIKEADTNGDGVISFNEF 143
+ I+EAD +GDG +++ EF
Sbjct: 123 DQXIREADIDGDGQVNYEEF 142
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 35/68 (51%)
Query: 86 QLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAA 145
+ E F FD+DG+G IT EL +GQ T EL + I E D +G+G I F EF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLT 71
Query: 146 VMAKSTLD 153
A+ D
Sbjct: 72 XXARKXKD 79
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 80/150 (53%), Gaps = 2/150 (1%)
Query: 3 GLHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGA 62
GL +Q ++R+ F FD D +P ++I +++ +D +G+G
Sbjct: 21 GLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGT 80
Query: 63 VEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKE 122
++F+E + + M E ++E++L+ FR FD D +G IT +L ++G+ LT +E
Sbjct: 81 IDFEEFLTMMTAKMGERD--SREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEE 138
Query: 123 LTEMIKEADTNGDGVISFNEFAAVMAKSTL 152
L EMI EAD N D I +EF +M K++L
Sbjct: 139 LQEMIAEADRNDDNEIDEDEFIRIMKKTSL 168
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 79.7 bits (195), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 81/150 (54%), Gaps = 2/150 (1%)
Query: 3 GLHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGA 62
GL +Q ++R+ F FD D +P ++I ++A++D +G+G
Sbjct: 1 GLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGT 60
Query: 63 VEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKE 122
++F+E + + M E ++E++++ FR FD D G I+ L ++G+ +T +E
Sbjct: 61 IDFEEFLQMMTAKMGERD--SREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEE 118
Query: 123 LTEMIKEADTNGDGVISFNEFAAVMAKSTL 152
L EMI EAD +GDG ++ EF +M K++L
Sbjct: 119 LQEMIDEADRDGDGEVNEEEFFRIMKKTSL 148
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 80/145 (55%), Gaps = 7/145 (4%)
Query: 7 DQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAVEFD 66
+Q+ + ++ FA FD D+ PS ++ L+ +D +GN A+EF
Sbjct: 8 EQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFS 67
Query: 67 ELVNAILPDMDETILIN--QEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELT 124
E L M + N +++LLE F+ FD++G+G I+AAEL + +G+ LT E+
Sbjct: 68 EF----LALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVD 123
Query: 125 EMIKEADTNGDGVISFNEFAAVMAK 149
EM++E ++G G I+ +FAA+++K
Sbjct: 124 EMLREV-SDGSGEINIKQFAALLSK 147
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+D +G I+A+ELA M +G + E+ +++ E D +G+ I
Sbjct: 5 LTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAI 64
Query: 139 SFNEFAAVMAK 149
F+EF A+M++
Sbjct: 65 EFSEFLALMSR 75
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 49/66 (74%)
Query: 83 NQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNE 142
++E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+ EMI+EAD +GDG +++ E
Sbjct: 7 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 66
Query: 143 FAAVMA 148
F +M
Sbjct: 67 FVQMMT 72
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 49/66 (74%)
Query: 83 NQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNE 142
++E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+ EMI+EAD +GDG +++ E
Sbjct: 4 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 63
Query: 143 FAAVMA 148
F +M
Sbjct: 64 FVQMMT 69
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 49/66 (74%)
Query: 83 NQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNE 142
++E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+ EMI+EAD +GDG +++ E
Sbjct: 6 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 65
Query: 143 FAAVMA 148
F +M
Sbjct: 66 FVQMMT 71
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 49/66 (74%)
Query: 83 NQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNE 142
++E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+ EMI+EAD +GDG +++ E
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 62
Query: 143 FAAVMA 148
F +M
Sbjct: 63 FVQMMT 68
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 49/65 (75%)
Query: 83 NQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNE 142
++E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+ EMI+EAD +GDG +++ E
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 62
Query: 143 FAAVM 147
F +M
Sbjct: 63 FVQMM 67
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 48/65 (73%)
Query: 84 QEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEF 143
+E++ E FR FD+DGNGYI+AAEL M +G+ LT +E+ EMI+EAD +GDG +++ EF
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 60
Query: 144 AAVMA 148
+M
Sbjct: 61 VQMMT 65
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 48/66 (72%)
Query: 83 NQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNE 142
++E+L+E F+ FDRDGNG I+AAEL M +G+ LT E+ EMI+EAD +GDG I++ E
Sbjct: 6 SEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEE 65
Query: 143 FAAVMA 148
F +M
Sbjct: 66 FVRMMV 71
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 48/65 (73%)
Query: 83 NQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNE 142
++E+L E FR FD+D NG+I+AAEL M +G+ LT +E+ EMI+EAD +GDG I++ E
Sbjct: 2 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 61
Query: 143 FAAVM 147
F VM
Sbjct: 62 FVKVM 66
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 73.9 bits (180), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 82/147 (55%), Gaps = 7/147 (4%)
Query: 7 DQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAVEFD 66
+Q+ + ++ FA FD D++ PS +++ L+ +D +GN +EF
Sbjct: 8 EQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFS 67
Query: 67 ELVNAILPDMDETILIN--QEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELT 124
E L M + N +++LLE F+ FD++G+G I+AAEL + +G+ LT E+
Sbjct: 68 EF----LALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVD 123
Query: 125 EMIKEADTNGDGVISFNEFAAVMAKST 151
+M++E ++G G I+ +FAA+++K +
Sbjct: 124 DMLREV-SDGSGEINIQQFAALLSKGS 149
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+D NG I+++ELA M +G + E+ +++ E D +G+ I
Sbjct: 5 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 64
Query: 139 SFNEFAAVMAK 149
F+EF A+M++
Sbjct: 65 EFSEFLALMSR 75
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 83/146 (56%), Gaps = 9/146 (6%)
Query: 7 DQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAVEFD 66
+Q+ + ++ FA FD D++ PS +++ L+ +D +GN +EF
Sbjct: 7 EQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFS 66
Query: 67 E---LVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
E L++ L D ++++LLE F+ FD++G+G I+AAEL + +G+ LT E+
Sbjct: 67 EFLALMSRQLKSND-----SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEV 121
Query: 124 TEMIKEADTNGDGVISFNEFAAVMAK 149
+M++E ++G G I+ +FAA+++K
Sbjct: 122 DDMLREV-SDGSGEINIQQFAALLSK 146
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+D NG I+++ELA M +G + E+ +++ E D +G+ I
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 63
Query: 139 SFNEFAAVMAK 149
F+EF A+M++
Sbjct: 64 EFSEFLALMSR 74
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 73.2 bits (178), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Query: 43 PSGDQIHVLLANMDANGNGAVEFDELVNAILPDMDETIL-INQEQLLEIFRAFDRDGNGY 101
P+ +++ ++ +D +G+G ++F+E + ++ M E ++E+L E+FR FDR+ +GY
Sbjct: 50 PTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGY 109
Query: 102 ITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVM 147
I A ELA G+ +T +E+ ++K+ D N DG I F+EF +M
Sbjct: 110 IDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMM 155
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 85 EQLLEIFRA----FDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISF 140
E+++ F+A FD DG G I+ EL M +GQ T +EL +I+E D +G G I F
Sbjct: 13 EEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDF 72
Query: 141 NEFAAVMAKS 150
EF +M +
Sbjct: 73 EEFLVMMVRQ 82
Score = 30.8 bits (68), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 56 DANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAE----LAGSM 111
DA+G G + EL ++ + +T +E+L I D DG+G I E + M
Sbjct: 27 DADGGGDISVKEL-GTVMRMLGQTP--TKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQM 83
Query: 112 AKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMAKS 150
+ + + +EL E+ + D N DG I E A + S
Sbjct: 84 KEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRAS 122
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 72.8 bits (177), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Query: 43 PSGDQIHVLLANMDANGNGAVEFDELVNAILPDMDETIL-INQEQLLEIFRAFDRDGNGY 101
P+ +++ ++ +D +G+G ++F+E + ++ M E ++E+L E FR FDR+ +GY
Sbjct: 50 PTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGY 109
Query: 102 ITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVM 147
I A ELA G+ +T +E+ ++K+ D N DG I F+EF +M
Sbjct: 110 IDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMM 155
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 85 EQLLEIFRA----FDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISF 140
E+++ F+A FD DG G I+ EL M +GQ T +EL +I+E D +G G I F
Sbjct: 13 EEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDF 72
Query: 141 NEFAAVMAK 149
EF +M +
Sbjct: 73 EEFLVMMVR 81
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 72.8 bits (177), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 49/66 (74%)
Query: 83 NQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNE 142
++E++ E FR FD+DGNGYI+AA+L M +G+ LT +E+ EMI+EAD +GDG +++ +
Sbjct: 5 SEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYED 64
Query: 143 FAAVMA 148
F +M
Sbjct: 65 FVQMMT 70
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 48/66 (72%)
Query: 83 NQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNE 142
++E++ E FR D+DGNGYI+AAEL M +G+ LT +E+ EMI+EAD +GDG +++ E
Sbjct: 27 SEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 86
Query: 143 FAAVMA 148
F +M
Sbjct: 87 FVQMMT 92
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +++ +LR+ F FD D D P+ ++ L ++ N G V
Sbjct: 19 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHV 78
Query: 64 EFDELVNAILPDM--DETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKM-GQPLTY 120
+FD+ V + P + + +I ++L + FR FD +G+G I+ +EL +M K+ G + +
Sbjct: 79 DFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGH 138
Query: 121 KELTEMIKEADTNGDGVISFNEFAAVMAK 149
+++ E+I++ D NGDG + F EF +M++
Sbjct: 139 RDIEEIIRDVDLNGDGRVDFEEFVRMMSR 167
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%)
Query: 85 EQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFA 144
E+L E FR FD+D +GYI +L M MG T EL E+ ++ + N G + F++F
Sbjct: 25 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFV 84
Query: 145 AVMAKSTL 152
+M L
Sbjct: 85 ELMGPKLL 92
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +++ +LR+ F FD D D P+ ++ L ++ N G V
Sbjct: 5 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHV 64
Query: 64 EFDELVNAILPDM--DETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKM-GQPLTY 120
+FD+ V + P + + +I ++L + FR FD +G+G I+ +EL +M K+ G + +
Sbjct: 65 DFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGH 124
Query: 121 KELTEMIKEADTNGDGVISFNEFAAVMAK 149
+++ E+I++ D NGDG + F EF +M++
Sbjct: 125 RDIEEIIRDVDLNGDGRVDFEEFVRMMSR 153
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%)
Query: 85 EQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFA 144
E+L E FR FD+D +GYI +L M MG T EL E+ ++ + N G + F++F
Sbjct: 11 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFV 70
Query: 145 AVMAKSTL 152
+M L
Sbjct: 71 ELMGPKLL 78
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 63/102 (61%), Gaps = 3/102 (2%)
Query: 46 DQIHVLLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAA 105
DQI L+ +D +G+G++E+ E + + + D TIL+++E++ F+ FD+DG+G I+
Sbjct: 381 DQIDSLMPLLDMDGSGSIEYSEFIASAI---DRTILLSRERMERAFKMFDKDGSGKISTK 437
Query: 106 ELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVM 147
EL ++ + +EL +I++ D N DG + FNEF ++
Sbjct: 438 ELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEML 479
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 11/115 (9%)
Query: 47 QIHVLLANMDANGNGAVEFDELVNAI-----LPDMDETILINQE------QLLEIFRAFD 95
Q+ + +D N +G ++ DELV L +D LI E Q+ + D
Sbjct: 332 QLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLD 391
Query: 96 RDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMAKS 150
DG+G I +E S L+ + + K D +G G IS E + +++
Sbjct: 392 MDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQA 446
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +++ +LR+ F FD D D P+ ++ L ++ N G V
Sbjct: 5 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHV 64
Query: 64 EFDELVNAILPDM--DETILINQEQLLEIFRAFDRDGNGYITAAELAGSM-AKMGQPLTY 120
+FD+ V + P + + +I ++L + FR FD +G+G I+ +EL +M A +G + +
Sbjct: 65 DFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGH 124
Query: 121 KELTEMIKEADTNGDGVISFNEFAAVMAK 149
+++ E+I++ D NGDG + F EF +M++
Sbjct: 125 RDIEEIIRDVDLNGDGRVDFEEFVRMMSR 153
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%)
Query: 85 EQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFA 144
E+L E FR FD+D +GYI +L M MG T EL E+ ++ + N G + F++F
Sbjct: 11 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFV 70
Query: 145 AVMAKSTL 152
+M L
Sbjct: 71 ELMGPKLL 78
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 70.1 bits (170), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%)
Query: 84 QEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEF 143
+E+L E F+ FD+D NGYI+A+EL M +G+ LT +E+ +MIKEAD +GDG +++ EF
Sbjct: 8 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEF 67
Query: 144 AAVM 147
+M
Sbjct: 68 VKMM 71
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 69.7 bits (169), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%)
Query: 84 QEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEF 143
+E+L E F+ FD+D NGYI+A+EL M +G+ LT +E+ +MIKEAD +GDG +++ EF
Sbjct: 3 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEF 62
Query: 144 AAVM 147
+M
Sbjct: 63 VKMM 66
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 47/66 (71%)
Query: 85 EQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFA 144
E L FRAFD+DG+G+IT EL +MA +GQPL +EL MI+EAD + DG +++ EFA
Sbjct: 6 EDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFA 65
Query: 145 AVMAKS 150
++A+
Sbjct: 66 RMLAQE 71
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 69.3 bits (168), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Query: 7 DQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAVEFD 66
+Q ++R+ F FD D +P ++I +++ +D G G + F
Sbjct: 3 EQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFG 62
Query: 67 ELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEM 126
+ + + M E +E++L+ F+ FD D G I+ L ++G+ LT +EL EM
Sbjct: 63 DFLTVMTQKMSEKD--TKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEM 120
Query: 127 IKEADTNGDGVISFNEFAAVMAK 149
I EAD +GDG +S EF +M K
Sbjct: 121 IDEADRDGDGEVSEQEFLRIMKK 143
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 66/107 (61%), Gaps = 1/107 (0%)
Query: 43 PSGDQIHVLLANMDANGNGAVEFDELVNAILPDM-DETILINQEQLLEIFRAFDRDGNGY 101
P+ +++ ++ +D +G+G V+FDE + ++ M D++ ++E+L ++FR FD++ +GY
Sbjct: 52 PTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGY 111
Query: 102 ITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMA 148
I EL + G+ +T ++ E++K+ D N DG I ++EF M
Sbjct: 112 IDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%)
Query: 99 NGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMAKSTLD 153
+G I+ EL M +GQ T +EL EMI E D +G G + F+EF +M +S D
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKD 87
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 72/145 (49%), Gaps = 5/145 (3%)
Query: 8 QLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAVEFDE 67
++N LR+IF D+D+ + IH +L ++D+N +G + + +
Sbjct: 55 EINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTD 114
Query: 68 LVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAK--MGQPLTYKELTE 125
+ A + D+ + +E L F+ FD DGNG I+ EL + + PL K +
Sbjct: 115 FLAATI---DKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDS 171
Query: 126 MIKEADTNGDGVISFNEFAAVMAKS 150
+++E D NGDG I F+EF +M+K
Sbjct: 172 LLQEVDLNGDGEIDFHEFMLMMSKK 196
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 87 LLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEF-AA 145
L IF A D D +G +++ E+ + K+G ++ +++++ D+N G I + +F AA
Sbjct: 59 LRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAA 118
Query: 146 VMAKST 151
+ K T
Sbjct: 119 TIDKQT 124
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Query: 43 PSGDQIHVLLANMDANGNGAVEFDELVNAILPDM-DETILINQEQLLEIFRAFDRDGNGY 101
P+ +++ ++ +D +G+G V+FDE + ++ M D++ +E+L ++FR FD++ +GY
Sbjct: 52 PTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKTEEELSDLFRMFDKNADGY 111
Query: 102 ITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVM 147
I EL + G+ +T ++ E++K+ D N DG I ++EF M
Sbjct: 112 IDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%)
Query: 99 NGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMAKSTLD 153
+G I+ EL M +GQ T +EL EMI E D +G G + F+EF +M +S D
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKD 87
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Query: 43 PSGDQIHVLLANMDANGNGAVEFDELVNAILPDM-DETILINQEQLLEIFRAFDRDGNGY 101
P+ +++ ++ +D +G+G V+FDE + ++ M D++ +E+L ++FR FD++ +GY
Sbjct: 52 PTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGY 111
Query: 102 ITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMA 148
I EL + G+ +T ++ E++K+ D N DG I ++EF M
Sbjct: 112 IDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 99 NGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMAKSTLD 153
+G I+ EL M +GQ T +EL EMI E D +G G + F+EF +M + D
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKD 87
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 66/107 (61%), Gaps = 1/107 (0%)
Query: 43 PSGDQIHVLLANMDANGNGAVEFDELVNAILPDM-DETILINQEQLLEIFRAFDRDGNGY 101
P+ +++ ++ +D +G+G V+FDE + ++ M D++ ++E+L ++FR +D++ +GY
Sbjct: 52 PTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDKNADGY 111
Query: 102 ITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMA 148
I EL + G+ +T ++ E++K+ D N DG I ++EF M
Sbjct: 112 IDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%)
Query: 99 NGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMAKSTLD 153
+G I+ EL M +GQ T +EL EMI E D +G G + F+EF +M +S D
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKD 87
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 66/107 (61%), Gaps = 1/107 (0%)
Query: 43 PSGDQIHVLLANMDANGNGAVEFDELVNAILPDM-DETILINQEQLLEIFRAFDRDGNGY 101
P+ +++ ++ +D +G+G V+FDE + ++ M D++ ++E+L ++FR FD++ +GY
Sbjct: 52 PTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGY 111
Query: 102 ITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMA 148
I EL + G+ +T ++ E++K+ D N DG I ++E+ M
Sbjct: 112 IDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEWLEFMK 158
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%)
Query: 99 NGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMAKSTLD 153
+G I+ EL M +GQ T +EL EMI E D +G G + F+EF +M +S D
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKD 87
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Query: 43 PSGDQIHVLLANMDANGNGAVEFDELVNAILPDMDETIL-INQEQLLEIFRAFDRDGNGY 101
P+ +++ ++ +D +G+G ++F+E + ++ M E ++E+L + FR FD++ +G+
Sbjct: 53 PTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGF 112
Query: 102 ITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVM 147
I EL + G+ +T +++ +++K++D N DG I F+EF +M
Sbjct: 113 IDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 85 EQLLEIFRA----FDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISF 140
E+++ F+A FD DG G I+ EL M +GQ T +EL +I+E D +G G I F
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 75
Query: 141 NEFAAVMAKS 150
EF +M +
Sbjct: 76 EEFLVMMVRQ 85
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Query: 43 PSGDQIHVLLANMDANGNGAVEFDELVNAILPDMDETIL-INQEQLLEIFRAFDRDGNGY 101
P+ +++ ++ +D +G+G ++F+E + ++ M E ++E+L + FR FD++ +G+
Sbjct: 53 PTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGF 112
Query: 102 ITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVM 147
I EL + G+ +T +++ +++K++D N DG I F+EF +M
Sbjct: 113 IDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 85 EQLLEIFRA----FDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISF 140
E+++ F+A FD DG G I+ EL M +GQ T +EL +I+E D +G G I F
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 75
Query: 141 NEFAAVMAKS 150
EF +M +
Sbjct: 76 EEFLVMMVRQ 85
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Query: 43 PSGDQIHVLLANMDANGNGAVEFDELVNAILPDM-DETILINQEQLLEIFRAFDRDGNGY 101
P+ +++ ++ +D +G+G V+FDE + ++ M D++ ++E+L ++FR D++ +GY
Sbjct: 52 PTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGY 111
Query: 102 ITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMA 148
I EL + G+ +T ++ E++K+ D N DG I ++EF M
Sbjct: 112 IDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%)
Query: 99 NGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMAKSTLD 153
+G I+ EL M +GQ T +EL EMI E D +G G + F+EF +M +S D
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKD 87
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Query: 43 PSGDQIHVLLANMDANGNGAVEFDELVNAILPDM-DETILINQEQLLEIFRAFDRDGNGY 101
P+ +++ ++ +D +G+G V+FDE + ++ M D++ ++E+L ++FR FD++ +GY
Sbjct: 52 PTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGY 111
Query: 102 ITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMA 148
I EL + G+ +T ++ E++K+ D N DG I ++E M
Sbjct: 112 IDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEXLEFMK 158
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%)
Query: 99 NGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMAKSTLD 153
+G I+ EL M +GQ T +EL EMI E D +G G + F+EF +M +S D
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKD 87
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Query: 43 PSGDQIHVLLANMDANGNGAVEFDELVNAILPDMDETIL-INQEQLLEIFRAFDRDGNGY 101
P+ +++ ++ +D +G+G ++F+E + ++ M E ++E+L FR FD++ +G+
Sbjct: 50 PTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGF 109
Query: 102 ITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVM 147
I EL + G+ +T +++ +++K++D N DG I F+EF +M
Sbjct: 110 IDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 155
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 85 EQLLEIFRA----FDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISF 140
E+++ F+A FD DG G I+ EL M +GQ T +EL +I+E D +G G I F
Sbjct: 13 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 72
Query: 141 NEFAAVMAKS 150
EF +M +
Sbjct: 73 EEFLVMMVRQ 82
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Query: 43 PSGDQIHVLLANMDANGNGAVEFDELVNAILPDMDETIL-INQEQLLEIFRAFDRDGNGY 101
P+ +++ ++ +D +G+G ++F+E + ++ M E ++E+L FR FD++ +G+
Sbjct: 53 PTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGF 112
Query: 102 ITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVM 147
I EL + G+ +T +++ +++K++D N DG I F+EF +M
Sbjct: 113 IDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 85 EQLLEIFRA----FDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISF 140
E+++ F+A FD DG G I+ EL M +GQ T +EL +I+E D +G G I F
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 75
Query: 141 NEFAAVMAKS 150
EF +M +
Sbjct: 76 EEFLVMMVRQ 85
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Query: 43 PSGDQIHVLLANMDANGNGAVEFDELVNAILPDMDETIL-INQEQLLEIFRAFDRDGNGY 101
P+ +++ ++ +D +G+G ++F+E + ++ M E ++E+L FR FD++ +G+
Sbjct: 53 PTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGF 112
Query: 102 ITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVM 147
I EL + G+ + +++ +++K++D N DG I F+EF +M
Sbjct: 113 IDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 85 EQLLEIFRA----FDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISF 140
E+++ F+A FD DG G I+ EL M +GQ T +EL +I+E D +G G I F
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 75
Query: 141 NEFAAVMAKS 150
EF +M +
Sbjct: 76 EEFLVMMVRQ 85
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 81 LINQEQLL---EIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGV 137
++++EQ++ E F FD+DG+G IT ELA + + Q T +EL +MI E D +G+G
Sbjct: 3 ILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGT 62
Query: 138 ISFNEFAAVMAKSTLD 153
I F+EF ++MAK D
Sbjct: 63 IEFDEFLSLMAKKVKD 78
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 37/76 (48%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ ++ F FD D D P+ +++ +++ +DA+GNG +
Sbjct: 4 LSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTI 63
Query: 64 EFDELVNAILPDMDET 79
EFDE ++ + + +T
Sbjct: 64 EFDEFLSLMAKKVKDT 79
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 81 LINQEQLL---EIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGV 137
++++EQ++ E F FD+DG+G IT ELA + + Q T +EL +MI E D +G+G
Sbjct: 3 ILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGT 62
Query: 138 ISFNEFAAVMAKST 151
I F+EF ++MAK
Sbjct: 63 IEFDEFLSLMAKKV 76
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 33/67 (49%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ ++ F FD D D P+ +++ +++ +DA+GNG +
Sbjct: 4 LSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTI 63
Query: 64 EFDELVN 70
EFDE ++
Sbjct: 64 EFDEFLS 70
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +GDG I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 63
Query: 139 SFNEFAAVMAKSTLD 153
F EF +MA+ D
Sbjct: 64 DFPEFLTMMARKMKD 78
Score = 31.2 bits (69), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/76 (21%), Positives = 35/76 (46%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ ++ +DA+G+G +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 63
Query: 64 EFDELVNAILPDMDET 79
+F E + + M +T
Sbjct: 64 DFPEFLTMMARKMKDT 79
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 59.7 bits (143), Expect = 6e-10, Method: Composition-based stats.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 13/152 (8%)
Query: 6 IDQLNQLRDIFARFDMDSDXXXXXXXXXX--------XXXXXXXKPSGDQIHVLLANMDA 57
+++ +L DIF + D + D K +++ +L +D
Sbjct: 351 LEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDF 410
Query: 58 NGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQP 117
+ NG +E+ E ++ MD+ IL ++E+L F FD D +G IT ELA
Sbjct: 411 DKNGYIEYSEFISVC---MDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGLTS-- 465
Query: 118 LTYKELTEMIKEADTNGDGVISFNEFAAVMAK 149
++ K +++ EAD N D +I F+EF ++M K
Sbjct: 466 ISEKTWNDVLGEADQNKDNMIDFDEFVSMMHK 497
Score = 32.0 bits (71), Expect = 0.14, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 43/84 (51%), Gaps = 8/84 (9%)
Query: 79 TILINQEQLLEIFRAFDRDGNGYITAAELAGSM-------AKMGQ-PLTYKELTEMIKEA 130
T L +++L +IF+ D++G+G + EL ++G+ +E+ ++KE
Sbjct: 349 TTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEV 408
Query: 131 DTNGDGVISFNEFAAVMAKSTLDF 154
D + +G I ++EF +V + F
Sbjct: 409 DFDKNGYIEYSEFISVCMDKQILF 432
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 48 IHVLLANMDANGNGAVEFD--ELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAA 105
I L+ D GNG ++FD +++ A + Q++L E FR +D++GNGYI+
Sbjct: 52 IRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTD 111
Query: 106 ELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMA 148
+ +A++ + L+ ++L MI E D +G G + F EF VM
Sbjct: 112 VMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMT 154
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 83 NQEQLLEI-FRAFDR-DGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISF 140
NQ +LLE FR F+ +G+G ++ ++ + +G T + ++I E D G+G I F
Sbjct: 10 NQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDF 69
Query: 141 NEFAAVMAK 149
+ F + A+
Sbjct: 70 DSFKIIGAR 78
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%)
Query: 83 NQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNE 142
++E++L+ FR FD D +G IT +L ++G+ LT +EL EMI EAD N D I +E
Sbjct: 7 SREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDE 66
Query: 143 FAAVMAKSTL 152
F +M K++L
Sbjct: 67 FIRIMKKTSL 76
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 64/120 (53%), Gaps = 8/120 (6%)
Query: 7 DQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAVEFD 66
+Q+ + ++ FA FD D++ PS +++ L+ +D +GN +EF
Sbjct: 7 EQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFS 66
Query: 67 E---LVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
E L++ L D ++++LLE F+ FD++G+G I+AAEL + +G+ LT EL
Sbjct: 67 EFLALMSRQLKSND-----SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEL 121
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+D NG I+++ELA M +G + E+ +++ E D +G+ I
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 63
Query: 139 SFNEFAAVMAK 149
F+EF A+M++
Sbjct: 64 EFSEFLALMSR 74
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 139 SFNEFAAVMAKSTLD 153
F EF +MA+ D
Sbjct: 64 DFPEFLTMMARKMKD 78
Score = 33.1 bits (74), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 35/76 (46%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 64 EFDELVNAILPDMDET 79
+F E + + M +T
Sbjct: 64 DFPEFLTMMARKMKDT 79
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 139 SFNEFAAVMAKSTLD 153
F EF +MA+ D
Sbjct: 64 DFPEFLTMMARKMKD 78
Score = 32.7 bits (73), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 35/76 (46%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 64 EFDELVNAILPDMDET 79
+F E + + M +T
Sbjct: 64 DFPEFLTMMARKMKDT 79
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%)
Query: 86 QLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAA 145
+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I F EF
Sbjct: 11 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 146 VMAKSTLD 153
+MA+ D
Sbjct: 71 LMARKMKD 78
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 37/76 (48%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+++ ++ F+ FD D D P+ ++ ++ +DA+GNG +
Sbjct: 4 LTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 64 EFDELVNAILPDMDET 79
+F E +N + M +T
Sbjct: 64 DFPEFLNLMARKMKDT 79
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 139 SFNEFAAVMAKSTLD 153
F EF +MA+ D
Sbjct: 64 DFPEFLTMMARKMKD 78
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFR 92
+F E + + M +T ++E++ E FR
Sbjct: 64 DFPEFLTMMARKMKDT--DSEEEIREAFR 90
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 5/99 (5%)
Query: 51 LLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGS 110
+L ++D + NG +E+ E V MD+ +L+++E+LL F+ FD DG+G IT EL G
Sbjct: 366 ILQSVDFDRNGYIEYSEFVTVC---MDKQLLLSRERLLAAFQQFDSDGSGKITNEEL-GR 421
Query: 111 MAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMAK 149
+ + + + + ++++E D N DG + F EF +M K
Sbjct: 422 LFGVTE-VDDETWHQVLQECDKNNDGEVDFEEFVEMMQK 459
Score = 30.8 bits (68), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/113 (21%), Positives = 50/113 (44%), Gaps = 12/113 (10%)
Query: 51 LLANMDANGNGAVEFDELVNA----------ILPDMDETILINQEQLLEIFRAFDRDGNG 100
+ +D NG+G ++ EL+ + D+D + + + ++ I ++ D D NG
Sbjct: 319 IFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQI--EAEVDHILQSVDFDRNG 376
Query: 101 YITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMAKSTLD 153
YI +E L+ + L ++ D++G G I+ E + + +D
Sbjct: 377 YIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFGVTEVD 429
Score = 30.0 bits (66), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 11/85 (12%)
Query: 79 TILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQ-----------PLTYKELTEMI 127
T L ++L +IFR D +G+G + EL K+ Q E+ ++
Sbjct: 308 TTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHIL 367
Query: 128 KEADTNGDGVISFNEFAAVMAKSTL 152
+ D + +G I ++EF V L
Sbjct: 368 QSVDFDRNGYIEYSEFVTVCMDKQL 392
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 139 SFNEFAAVMAKS 150
F EF +MA+
Sbjct: 64 DFPEFLTMMARK 75
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 33/73 (45%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 64 EFDELVNAILPDM 76
+F E + + M
Sbjct: 64 DFPEFLTMMARKM 76
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 139 SFNEFAAVMAKS 150
F EF +MA+
Sbjct: 64 DFPEFLTMMARK 75
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 33/73 (45%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 64 EFDELVNAILPDM 76
+F E + + M
Sbjct: 64 DFPEFLTMMARKM 76
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 139 SFNEFAAVMAKS 150
F EF +MA+
Sbjct: 64 DFPEFLTMMARK 75
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 33/73 (45%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 64 EFDELVNAILPDM 76
+F E + + M
Sbjct: 64 DFPEFLTMMARKM 76
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 139 SFNEFAAVMAKS 150
F EF +MA+
Sbjct: 64 DFPEFLTMMARK 75
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/67 (22%), Positives = 31/67 (46%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 64 EFDELVN 70
+F E +
Sbjct: 64 DFPEFLT 70
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+DG+G IT EL M +GQ T EL +MI E D +G+G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 139 SFNEFAAVMAKS 150
F EF +MA+
Sbjct: 65 DFPEFLTMMARK 76
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/67 (22%), Positives = 31/67 (46%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +Q+ + ++ F+ FD D D P+ ++ ++ +DA+GNG +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 64 EFDELVN 70
+F E +
Sbjct: 65 DFPEFLT 71
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 61/103 (59%), Gaps = 5/103 (4%)
Query: 47 QIHVLLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAE 106
++ +L ++D + NG +E+ E V MD+ +L+++E+LL F+ FD DG+G IT E
Sbjct: 88 EVDHILQSVDFDRNGYIEYSEFVTVC---MDKQLLLSRERLLAAFQQFDSDGSGKITNEE 144
Query: 107 LAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMAK 149
L G + + + + + ++++E D N DG + F EF +M K
Sbjct: 145 L-GRLFGVTE-VDDETWHQVLQECDKNNDGEVDFEEFVEMMQK 185
Score = 31.2 bits (69), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/113 (21%), Positives = 50/113 (44%), Gaps = 12/113 (10%)
Query: 51 LLANMDANGNGAVEFDELVNA----------ILPDMDETILINQEQLLEIFRAFDRDGNG 100
+ +D NG+G ++ EL+ + D+D + + + ++ I ++ D D NG
Sbjct: 45 IFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQI--EAEVDHILQSVDFDRNG 102
Query: 101 YITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMAKSTLD 153
YI +E L+ + L ++ D++G G I+ E + + +D
Sbjct: 103 YIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFGVTEVD 155
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 11/85 (12%)
Query: 79 TILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQ-----------PLTYKELTEMI 127
T L ++L +IFR D +G+G + EL K+ Q E+ ++
Sbjct: 34 TTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHIL 93
Query: 128 KEADTNGDGVISFNEFAAVMAKSTL 152
+ D + +G I ++EF V L
Sbjct: 94 QSVDFDRNGYIEYSEFVTVCMDKQL 118
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 6/135 (4%)
Query: 10 NQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAVEFD-EL 68
+Q+++ F FD D+D P+ +++ + ++A EFD
Sbjct: 5 DQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAK-----EFDLAT 59
Query: 69 VNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIK 128
+ +T +++L+ FRA D++GNG I AEL + +G LT E+ E++K
Sbjct: 60 FKTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMK 119
Query: 129 EADTNGDGVISFNEF 143
E +GDG I++ F
Sbjct: 120 EVSVSGDGAINYESF 134
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 83 NQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNE 142
+E++L+ F+ FD D G I+ L ++G+ LT +EL EMI EAD +GDG +S E
Sbjct: 9 TKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQE 68
Query: 143 FAAVMAKSTL 152
F +M K++L
Sbjct: 69 FLRIMKKTSL 78
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 83 NQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNE 142
+E++L+ F+ FD D G I+ L ++G+ LT +EL EMI EAD +GDG +S E
Sbjct: 19 TKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQE 78
Query: 143 FAAVMAKSTL 152
F +M K++L
Sbjct: 79 FLRIMKKTSL 88
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 81 LINQEQLLEIFRAFDRDGNGYITAAELAGSMAKM-GQPLTYKELTEMIKEADTNGDGVIS 139
+I ++L + FR FD +G+G I+ +EL +M K+ G + ++++ E+I++ D NGDG +
Sbjct: 3 MIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVD 62
Query: 140 FNEFAAVMAK 149
F EF +M++
Sbjct: 63 FEEFVRMMSR 72
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 9 LNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQ-IHVLLANMDANGNGAVEFDE 67
+ +LRD F FD + D G + I ++ ++D NG+G V+F+E
Sbjct: 6 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 65
Query: 68 LVN 70
V
Sbjct: 66 FVR 68
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 47 QIHVLLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAE 106
++ ++ +DA+GNG ++F E + + M +T ++E++ E FR FD+DGNGYI+AAE
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTD--SEEEIREAFRVFDKDGNGYISAAE 59
Query: 107 LAGSMAKMG 115
L M +G
Sbjct: 60 LRHVMTNLG 68
Score = 32.7 bits (73), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 122 ELTEMIKEADTNGDGVISFNEFAAVMAKSTLD 153
EL +MI E D +G+G I F EF +MA+ D
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMARKMKD 33
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 47 QIHVLLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAE 106
++ +L D + NG +++ E V MD L+++++L F+ FD+DGNG I+ E
Sbjct: 108 EVDAILGAADFDRNGYIDYSEFVTVA---MDRKSLLSKDKLESAFQKFDQDGNGKISVDE 164
Query: 107 LAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMAK 149
LA L K EMI D+N DG + F EF ++ K
Sbjct: 165 LASVFGL--DHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQK 205
Score = 35.0 bits (79), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 51 LLANMDANGNGAVEFDELVNAILPDMDETILIN-----QEQLLEIFRAFDRDGNGYITAA 105
+ ++D NG+G ++ EL++ E + + + ++ I A D D NGYI +
Sbjct: 68 IFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYS 127
Query: 106 ELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAV 146
E L+ +L ++ D +G+G IS +E A+V
Sbjct: 128 EFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASV 168
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%)
Query: 84 QEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEF 143
Q++L E FR +D++GNGYI+ + +A++ + L+ ++L MI E D +G G + F EF
Sbjct: 2 QQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEF 61
Query: 144 AAVMA 148
VM
Sbjct: 62 MGVMT 66
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 47 QIHVLLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAE 106
++ +L D + NG +++ E V MD L+++++L F+ FD+DGNG I+ E
Sbjct: 391 EVDAILGAADFDRNGYIDYSEFVTVA---MDRKSLLSKDKLESAFQKFDQDGNGKISVDE 447
Query: 107 LAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMAK 149
LA L K EMI D+N DG + F EF ++ K
Sbjct: 448 LASVFGL--DHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQK 488
Score = 34.7 bits (78), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Query: 51 LLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLE-----IFRAFDRDGNGYITAA 105
+ ++D NG+G ++ EL++ E + + +E I A D D NGYI +
Sbjct: 351 IFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYS 410
Query: 106 ELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAV 146
E L+ +L ++ D +G+G IS +E A+V
Sbjct: 411 EFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASV 451
Score = 26.2 bits (56), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 33/95 (34%), Gaps = 18/95 (18%)
Query: 49 HVLLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELA 108
H + M + +E L NAI E R F + A L
Sbjct: 292 HPWIKEMCSKKESGIELPSLANAI----------------ENMRKFQNSQK--LAQAALL 333
Query: 109 GSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEF 143
+K+ KELT++ + D NGDG + E
Sbjct: 334 YMASKLTSQEETKELTDIFRHIDKNGDGQLDRQEL 368
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F +D+DG+G IT EL M +G T EL +MI E D +G+G I
Sbjct: 4 LTEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTI 63
Query: 139 SFNEFAAVMAK 149
F EF +MA+
Sbjct: 64 DFPEFLTMMAR 74
Score = 31.2 bits (69), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/70 (21%), Positives = 32/70 (45%)
Query: 1 MGGLHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGN 60
M L +Q+ + ++ F+ +D D D P+ ++ ++ +DA+GN
Sbjct: 1 MDQLTEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGN 60
Query: 61 GAVEFDELVN 70
G ++F E +
Sbjct: 61 GTIDFPEFLT 70
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%)
Query: 85 EQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFA 144
E++ E F+ FDRDGNG+I+ EL +M +G EL +I+ D +GDG + F EF
Sbjct: 36 EEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFV 95
Query: 145 AVMAK 149
++
Sbjct: 96 TLLGP 100
Score = 33.9 bits (76), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 33/68 (48%)
Query: 7 DQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAVEFD 66
D+L ++R+ F FD D + P+ ++ V++ +D +G+G V+F+
Sbjct: 33 DELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFE 92
Query: 67 ELVNAILP 74
E V + P
Sbjct: 93 EFVTLLGP 100
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 47 QIHVLLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAE 106
+I L+ D + +G +++ E + A + L +E L+ F FD+DG+GYIT E
Sbjct: 47 EIKDLMDAADIDKSGTIDYGEFIAATVH---LNKLEREENLVSAFSYFDKDGSGYITLDE 103
Query: 107 LAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMAK 149
+ + G L + +MIKE D + DG I + EFAA+M K
Sbjct: 104 IQQACKDFG--LDDIHIDDMIKEIDQDNDGQIDYGEFAAMMRK 144
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 87 LLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAV 146
L E+F+ D D +G IT EL + ++G L E+ +++ AD + G I + EF A
Sbjct: 12 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAA 71
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 83 NQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQ-PLTYKELTEMIKEADTNGDGVISFN 141
++E++L F+ FD +G+G I E M K+G+ PLT E+ E +KEAD +G+GVI
Sbjct: 6 DEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIP 65
Query: 142 EFAAVMAKST 151
EF ++ KS
Sbjct: 66 EFMDLIKKSK 75
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 56 DANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMG 115
DANG+G ++FDE I+ + E L + E + E + D DGNG I E + K
Sbjct: 18 DANGDGVIDFDEF-KFIMQKVGEEPLTDAE-VEEAMKEADEDGNGVIDIPEFMDLIKKSK 75
Query: 116 QPLT 119
L
Sbjct: 76 NALK 79
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%)
Query: 83 NQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNE 142
++E+L ++FR FD++ +GYI EL + G+ +T ++ E++K+ D N DG I ++E
Sbjct: 3 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 62
Query: 143 FAAVMA 148
F M
Sbjct: 63 FLEFMK 68
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%)
Query: 84 QEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEF 143
+E+L ++FR FD++ +GYI EL + G+ +T ++ E++K+ D N DG I ++EF
Sbjct: 9 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 68
Query: 144 AAVMA 148
M
Sbjct: 69 LEFMK 73
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%)
Query: 84 QEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEF 143
+E+L ++FR FD++ +GYI EL + G+ +T ++ E++K+ D N DG I ++EF
Sbjct: 14 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 73
Query: 144 AAVMA 148
M
Sbjct: 74 LEFMK 78
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%)
Query: 83 NQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNE 142
++E+L ++FR FD++ +GYI EL + G+ +T ++ E++K+ D N DG I ++E
Sbjct: 5 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 64
Query: 143 FAAVMA 148
F M
Sbjct: 65 FLEFMK 70
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 47 QIHVLLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAE 106
++ +L +D + NG +E+ E V MD L+++E+L FR FD D +G I++ E
Sbjct: 383 EVDQVLDAVDFDKNGYIEYSEFVTVA---MDRKTLLSRERLERAFRMFDSDNSGKISSTE 439
Query: 107 LAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMAK 149
LA + + ++ E D N DG + F+EF ++ K
Sbjct: 440 LATIFGV--SDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLK 480
Score = 28.9 bits (63), Expect = 1.2, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 17/92 (18%)
Query: 73 LPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGS----MAKMGQPLTY-------K 121
L DET ++L IF D++G+G + AEL M GQ +
Sbjct: 328 LTSQDET-----KELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEH 382
Query: 122 ELTEMIKEADTNGDGVISFNEFAAV-MAKSTL 152
E+ +++ D + +G I ++EF V M + TL
Sbjct: 383 EVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTL 414
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%)
Query: 83 NQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNE 142
++E+L ++FR FD++ +GYI EL + G+ +T ++ E++K+ D N DG I ++E
Sbjct: 4 SEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 63
Query: 143 FAAVMA 148
F M
Sbjct: 64 FLEFMK 69
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 56 DANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMG 115
D G G F + + E +E++L+ F+ FD D G I+ L ++G
Sbjct: 77 DKEGTGKXNFGDFLTVXTQKXSEKD--TKEEILKAFKLFDDDETGKISFKNLKRVAKELG 134
Query: 116 QPLTYKELTEMIKEADTNGDGVISFNEFAAVMAKSTL 152
+ LT +EL E I EAD +GDG +S EF + K++L
Sbjct: 135 ENLTDEELQEXIDEADRDGDGEVSEQEFLRIXKKTSL 171
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 9/103 (8%)
Query: 50 VLLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAG 109
+LL +D++G+G +++ E + A + ++++ + FR FD D +G IT AELA
Sbjct: 94 LLLDQIDSDGSGNIDYTEFLAAAIDRRQ----LSKKLIYCAFRVFDVDNDGEITTAELAH 149
Query: 110 SM---AKMGQ--PLTYKELTEMIKEADTNGDGVISFNEFAAVM 147
+ K G ++ +MI+E D NGDG I F EF+ +M
Sbjct: 150 VLFNGNKRGNITERDVNQVKKMIREVDKNGDGKIDFYEFSEMM 192
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 9/99 (9%)
Query: 56 DANGNGAVEFDELVNAILPDMDETILINQEQLLEI-FRAFDRDGNGYITAAELAGSMAKM 114
D +GNG V+F E + + ++ ++EQ L FR +D D +GYI+ EL + M
Sbjct: 49 DTDGNGEVDFKEFIEGV---SQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMM 105
Query: 115 -GQPLTYKELTEMIKE----ADTNGDGVISFNEFAAVMA 148
G L +L +++ + AD +GDG ISF EF AV+
Sbjct: 106 VGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVG 144
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 9/99 (9%)
Query: 56 DANGNGAVEFDELVNAILPDMDETILINQEQLLEI-FRAFDRDGNGYITAAELAGSMAKM 114
D +GNG V+F E + + ++ ++EQ L FR +D D +GYI+ EL + M
Sbjct: 62 DTDGNGEVDFKEFIEGV---SQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMM 118
Query: 115 -GQPLTYKELTEMIKE----ADTNGDGVISFNEFAAVMA 148
G L +L +++ + AD +GDG ISF EF AV+
Sbjct: 119 VGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVG 157
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 9/99 (9%)
Query: 56 DANGNGAVEFDELVNAILPDMDETILINQEQLLEI-FRAFDRDGNGYITAAELAGSMAKM 114
D +GNG V+F E + + ++ ++EQ L FR +D D +GYI+ EL + M
Sbjct: 48 DTDGNGEVDFKEFIEGV---SQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMM 104
Query: 115 -GQPLTYKELTEMIKE----ADTNGDGVISFNEFAAVMA 148
G L +L +++ + AD +GDG ISF EF AV+
Sbjct: 105 VGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVG 143
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 9/99 (9%)
Query: 56 DANGNGAVEFDELVNAILPDMDETILINQEQLLEI-FRAFDRDGNGYITAAELAGSMAKM 114
D +GNG V+F E + + ++ ++EQ L FR +D D +GYI+ EL + M
Sbjct: 63 DTDGNGEVDFKEFIEGV---SQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMM 119
Query: 115 -GQPLTYKELTEMIKE----ADTNGDGVISFNEFAAVMA 148
G L +L +++ + AD +GDG ISF EF AV+
Sbjct: 120 VGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVG 158
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 59/104 (56%), Gaps = 9/104 (8%)
Query: 50 VLLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAG 109
+LL +D++G+G +++ E + A L + ++++ + FR FD D +G IT AELA
Sbjct: 91 LLLDQIDSDGSGKIDYTEFIAAAL----DRKQLSKKLIYCAFRVFDVDNDGEITTAELAH 146
Query: 110 SMAKMGQP--LTYKELTE---MIKEADTNGDGVISFNEFAAVMA 148
+ + +T +++ MI++ D N DG I F+EF+ +M
Sbjct: 147 ILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK 190
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 85 EQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFA 144
E+L F D DG GYIT +L + K G L Y ++ + D++G G I + EF
Sbjct: 52 EKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPY-NFDLLLDQIDSDGSGKIDYTEFI 110
Query: 145 A 145
A
Sbjct: 111 A 111
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 90 IFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEF 143
IF+ FD +G+G I+AAEL ++ +G +T E+ M+ E DT+GDG ISF EF
Sbjct: 14 IFKRFDANGDGKISAAELGEALKTLGS-ITPDEVKHMMAEIDTDGDGFISFQEF 66
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 47 QIHVLLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAE 106
++ +L +D + NG +E+ E V MD L+++E+L FR FD D +G I++ E
Sbjct: 407 EVDQVLDAVDFDKNGYIEYSEFVTVA---MDRKTLLSRERLERAFRMFDSDNSGKISSTE 463
Query: 107 LAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMAK 149
LA + + ++ E D N DG + F+EF ++ K
Sbjct: 464 LATIFGV--SDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLK 504
Score = 27.3 bits (59), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 17/92 (18%)
Query: 73 LPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKM----GQPLTY-------K 121
L DET ++L IF D++G+G + AEL ++ GQ +
Sbjct: 352 LTSQDET-----KELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEH 406
Query: 122 ELTEMIKEADTNGDGVISFNEFAAV-MAKSTL 152
E+ +++ D + +G I ++EF V M + TL
Sbjct: 407 EVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTL 438
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 47 QIHVLLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAE 106
++ +L +D + NG +E+ E V MD L+++E+L FR FD D +G I++ E
Sbjct: 406 EVDQVLDAVDFDKNGYIEYSEFVTVA---MDRKTLLSRERLERAFRMFDSDNSGKISSTE 462
Query: 107 LAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMAK 149
LA + + ++ E D N DG + F+EF ++ K
Sbjct: 463 LATIFGV--SDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLK 503
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 17/92 (18%)
Query: 73 LPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKM----GQPLTY-------K 121
L DET ++L IF D++G+G + AEL ++ GQ +
Sbjct: 351 LTSQDET-----KELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEH 405
Query: 122 ELTEMIKEADTNGDGVISFNEFAAV-MAKSTL 152
E+ +++ D + +G I ++EF V M + TL
Sbjct: 406 EVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTL 437
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 7 DQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAVEFD 66
+Q ++ + F+ FDM++D + +I L+ D+ G +++D
Sbjct: 20 EQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYD 79
Query: 67 ELVNAILPDMDETILINQEQLLEIFRAF---DRDGNGYITAAELAGSMAKMGQPLTYKEL 123
+ M E IL ++ L EI RAF D D G I+ L ++G+ LT +EL
Sbjct: 80 DFYIV----MGEKIL-KRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEEL 134
Query: 124 TEMIKEADTNGDGVISFNEFAAVMAKS 150
MI+E D +GDG I+ NEF A+ S
Sbjct: 135 RAMIEEFDLDGDGEINENEFIAICTDS 161
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 40/69 (57%)
Query: 84 QEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEF 143
++++ E F FD + +G++ EL +M +G L +E+ ++I E D+ G ++ +++F
Sbjct: 22 KQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDF 81
Query: 144 AAVMAKSTL 152
VM + L
Sbjct: 82 YIVMGEKIL 90
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%)
Query: 82 INQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFN 141
+++ +L E FR D++ G I L + +G LT E+ MI E DT+G G + +
Sbjct: 4 LDERELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYE 63
Query: 142 EFAAVMAKS 150
EF +M S
Sbjct: 64 EFKCLMMSS 72
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 89 EIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFA 144
IF+ FD +G+G I+++EL ++ +G +T E+ M+ E DT+GDG ISF+EF
Sbjct: 15 RIFKRFDTNGDGKISSSELGDALKTLGS-VTPDEVRRMMAEIDTDGDGFISFDEFT 69
Score = 26.2 bits (56), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 8/25 (32%), Positives = 17/25 (68%)
Query: 46 DQIHVLLANMDANGNGAVEFDELVN 70
D++ ++A +D +G+G + FDE +
Sbjct: 46 DEVRRMMAEIDTDGDGFISFDEFTD 70
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 16/109 (14%)
Query: 56 DANGNGAVEFDELVNAILPDMDETILI--------NQEQLLEIFRAFDRDGNGYITAAEL 107
DA +G ++ +EL N ILP + +LI N + +I+R +D D +GYI+AAEL
Sbjct: 67 DATFDGRLQIEELANXILPQEENFLLIFRREAPLDNSVEFXKIWRKYDADSSGYISAAEL 126
Query: 108 AGSM-------AKMGQPLTYKELTE-MIKEADTNGDGVISFNEFAAVMA 148
+ K P E T+ K D N DG + N+ A ++A
Sbjct: 127 KNFLKDLFLQHKKKIPPNKLDEYTDAXXKIFDKNKDGRLDLNDLARILA 175
Score = 27.3 bits (59), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 10/68 (14%)
Query: 87 LLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYK-----ELTEMIKEA-----DTNGDG 136
L+I++ FD D NGYI EL + L K E + IK++ D DG
Sbjct: 13 FLQIWQHFDADDNGYIEGKELDDFFRHXLKKLQPKDKITDERVQQIKKSFXSAYDATFDG 72
Query: 137 VISFNEFA 144
+ E A
Sbjct: 73 RLQIEELA 80
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 82 INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ +EQ+ E F FD+D NG I+++ELA M +G + E+ +++ E D +G+ I
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 63
Query: 139 SFNEFAAVMAK 149
F+EF A+M++
Sbjct: 64 EFSEFLALMSR 74
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 30/63 (47%)
Query: 7 DQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAVEFD 66
+Q+ + ++ FA FD D++ PS +++ L+ +D +GN +EF
Sbjct: 7 EQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFS 66
Query: 67 ELV 69
E +
Sbjct: 67 EFL 69
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 49.7 bits (117), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 47 QIHVLLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAE 106
++ +L +D + NG +E+ E V D L+++E+L FR FD D +G I++ E
Sbjct: 383 EVDQVLDAVDFDKNGYIEYSEFVTVA---XDRKTLLSRERLERAFRXFDSDNSGKISSTE 439
Query: 107 LAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMAK 149
LA + + ++ E D N DG + F+EF + K
Sbjct: 440 LATIFGV--SDVDSETWKSVLSEVDKNNDGEVDFDEFQQXLLK 480
Score = 27.7 bits (60), Expect = 2.9, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 16/85 (18%)
Query: 73 LPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKM----GQPLTY-------K 121
L DET ++L IF D++G+G + AEL ++ GQ +
Sbjct: 328 LTSQDET-----KELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEH 382
Query: 122 ELTEMIKEADTNGDGVISFNEFAAV 146
E+ +++ D + +G I ++EF V
Sbjct: 383 EVDQVLDAVDFDKNGYIEYSEFVTV 407
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 41/65 (63%)
Query: 83 NQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNE 142
++E+L FR FD++ +G+I EL + G+ + +++ +++K++D N DG I F+E
Sbjct: 8 SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDE 67
Query: 143 FAAVM 147
F +M
Sbjct: 68 FLKMM 72
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 85 EQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFA 144
E+L E FR FD+D +GYI +L M MG T EL E+ ++ + N G + F++F
Sbjct: 10 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFV 69
Query: 145 AVMAKS 150
+M
Sbjct: 70 ELMGPK 75
Score = 26.9 bits (58), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 31/73 (42%)
Query: 4 LHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAV 63
L +++ +LR+ F FD D D P+ ++ L ++ N G V
Sbjct: 4 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHV 63
Query: 64 EFDELVNAILPDM 76
+FD+ V + P +
Sbjct: 64 DFDDFVELMGPKL 76
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 3/141 (2%)
Query: 7 DQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAVEFD 66
DQ+++ ++ F FD + + + + DA GNG ++F
Sbjct: 3 DQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFP 62
Query: 67 ELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEM 126
E ++ + M +T +++ L + FR FD +G GYI A L ++ +G L E E
Sbjct: 63 EFLSMMGRRMKQTT--SEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEF 120
Query: 127 IKEADTNGDGVISFNEFAAVM 147
+ +T G I ++ F M
Sbjct: 121 LGITETE-KGQIRYDNFINTM 140
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 86 QLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAA 145
+ E F FD + G+IT L + + G + EM EAD G+G I F EF +
Sbjct: 7 EFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLS 66
Query: 146 VMAK 149
+M +
Sbjct: 67 MMGR 70
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 56 DANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMG 115
D + +G +++ E + A L + ++ L F FD+DG+GYIT EL + + G
Sbjct: 73 DVDNSGTIDYKEFIAATLH---LNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFG 129
Query: 116 QPLTYKELTEMIKEADTNGDGVISFNEFAAVMAKSTL 152
+ + E+ ++ D + DG I +NEF A K ++
Sbjct: 130 --VEDVRIEELXRDVDQDNDGRIDYNEFVAXXQKGSI 164
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%)
Query: 83 NQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNE 142
++++ E F FD DG+G I A EL +M +G +E+ +MI E D +G G I F E
Sbjct: 28 QKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEE 87
Query: 143 FAAVMA 148
F +M
Sbjct: 88 FLTMMT 93
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 34/74 (45%)
Query: 3 GLHIDQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGA 62
GL +Q ++R+ F FD D +P ++I +++ +D +G+G
Sbjct: 23 GLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGT 82
Query: 63 VEFDELVNAILPDM 76
++F+E + + M
Sbjct: 83 IDFEEFLTMMTAKM 96
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 59/136 (43%), Gaps = 46/136 (33%)
Query: 49 HVLLANMDANGNGAVEFDEL---VNAILPDMDETILINQEQLLE-IFRAFDRDGNGYITA 104
L +DANG+G+V ++E+ V++ P I EQLL+ IF+A D DGNG I
Sbjct: 3 EALFKQLDANGDGSVSYEEVKAFVSSKRP-------IKNEQLLQLIFKAIDIDGNGEIDL 55
Query: 105 AELAGSMA----------KMGQPLTYK-------------------------ELTEMIKE 129
AE A K+G + YK ++ + I +
Sbjct: 56 AEFTKFAAAVKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGYEKVVDQIMK 115
Query: 130 ADTNGDGVISFNEFAA 145
AD NGDG I+ EF A
Sbjct: 116 ADANGDGYITLEEFLA 131
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 90 IFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMI-KEADTNGDGVI---SFNEFAA 145
+F+ D +G+G ++ E+ ++ +P+ ++L ++I K D +G+G I F +FAA
Sbjct: 5 LFKQLDANGDGSVSYEEVKAFVSSK-RPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFAA 63
Query: 146 VMAKSTLDFFGLGLS 160
+ + L +GL
Sbjct: 64 AVKEQDLSDEKVGLK 78
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 85 EQLLEIFRA----FDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISF 140
E+++ F+A FD DG G I+ EL M +GQ T +EL +I+E D +G G I F
Sbjct: 5 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 64
Query: 141 NEFAAVMAK 149
EF +M +
Sbjct: 65 EEFLVMMVR 73
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 85 EQLLEIFRA----FDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISF 140
E+++ F+A FD DG G I+ EL M +GQ T +EL +I+E D +G G I F
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 75
Query: 141 NEFAAVMAK 149
EF +M +
Sbjct: 76 EEFLVMMVR 84
Score = 26.2 bits (56), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 8/36 (22%), Positives = 23/36 (63%)
Query: 43 PSGDQIHVLLANMDANGNGAVEFDELVNAILPDMDE 78
P+ +++ ++ +D +G+G ++F+E + ++ M E
Sbjct: 53 PTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKE 88
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 83 NQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNE 142
NQE L+E FRA D DG+G I+ EL +++ G P + +++ D N G I+F+E
Sbjct: 26 NQE-LMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDE 84
Query: 143 F 143
F
Sbjct: 85 F 85
Score = 27.3 bits (59), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 121 KELTEMIKEADTNGDGVISFNEFAAVMAKSTLDF 154
+EL E + DT+G G IS E A ++ + + F
Sbjct: 27 QELMEWFRAVDTDGSGAISVPELNAALSSAGVPF 60
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 89 EIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEF 143
IF+ FD +G+G I+ +EL ++ +G + E+ M+ E DT+GDG I FNEF
Sbjct: 7 RIFKRFDTNGDGKISLSELTDALRTLGST-SADEVQRMMAEIDTDGDGFIDFNEF 60
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 15 IFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAVEFDELVN 70
IF RFD + D S D++ ++A +D +G+G ++F+E ++
Sbjct: 8 IFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFIS 62
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 89 EIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEF 143
IF+ FD +G+G I+ +EL ++ +G + E+ M+ E DT+GDG I FNEF
Sbjct: 6 RIFKRFDTNGDGKISLSELTDALRTLGST-SADEVQRMMAEIDTDGDGFIDFNEF 59
Score = 27.3 bits (59), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 15 IFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAVEFDELVN 70
IF RFD + D S D++ ++A +D +G+G ++F+E ++
Sbjct: 7 IFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFIS 61
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 16/107 (14%)
Query: 49 HVLLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAE-- 106
HV DANG+G ++F E + A+ + +++L F +D DGNGYI+ AE
Sbjct: 67 HVF-RTFDANGDGTIDFREFIIALSVTSRGKL---EQKLKWAFSMYDLDGNGYISKAEML 122
Query: 107 --------LAGSMAKMGQ-PLTYKELTEMI-KEADTNGDGVISFNEF 143
+ S+ KM + T ++ TE I ++ DTN DG +S EF
Sbjct: 123 EIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEF 169
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 67 ELVNAILPDMDETILINQEQLLEIFRAFDRDG-NGYITAAE---LAGSMAKMGQPLTYKE 122
+L ++ D+ E+ + ++ E ++ F RD +G+++ E + G+ G + E
Sbjct: 7 KLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAE 66
Query: 123 LTEMIKEADTNGDGVISFNEFAAVMA 148
+ + D NGDG I F EF ++
Sbjct: 67 --HVFRTFDANGDGTIDFREFIIALS 90
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 82 INQEQLLEIFRAFD---RDG-NGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGV 137
+ +EQ E AFD +D +G I+ EL M +GQ T +EL EMI E D +G G
Sbjct: 12 LTEEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 138 ISFNEFAAVMAKSTLD 153
+ F+EF +M + D
Sbjct: 72 VDFDEFLVMMVRCMKD 87
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 82 INQEQLLEIFRAFD----RDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGV 137
+ +EQ E AFD +G I+ EL M +GQ T +EL EMI E D +G G
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 138 ISFNEFAAVMAKSTLD 153
+ F+EF +M +S D
Sbjct: 72 VDFDEFLVMMVRSMKD 87
Score = 26.2 bits (56), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 9/34 (26%), Positives = 22/34 (64%)
Query: 43 PSGDQIHVLLANMDANGNGAVEFDELVNAILPDM 76
P+ +++ ++ +D +G+G V+FDE + ++ M
Sbjct: 52 PTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSM 85
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 58/131 (44%), Gaps = 40/131 (30%)
Query: 49 HVLLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLE-IFRAFDRDGNGYITAAEL 107
L +D NG+GAV ++E V A + + I EQLL+ IF++ D DGNG I E
Sbjct: 3 EALFKEIDVNGDGAVSYEE-VKAFVS---KKRAIKNEQLLQLIFKSIDADGNGEIDQNEF 58
Query: 108 A---GSMA-------KMGQPLTYK-------------------------ELTEMIKEADT 132
A GS+ K+G + YK ++ E + +AD
Sbjct: 59 AKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKADA 118
Query: 133 NGDGVISFNEF 143
NGDG I+ EF
Sbjct: 119 NGDGYITLEEF 129
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 90 IFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMI-KEADTNGDGVISFNEFA 144
+F+ D +G+G ++ E+ ++K + + ++L ++I K D +G+G I NEFA
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKK-RAIKNEQLLQLIFKSIDADGNGEIDQNEFA 59
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 126 MIKEADTNGDGVISFNEFAAVMAKS 150
+ KE D NGDG +S+ E A ++K
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKK 29
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 82 INQEQLLEIFRAFD----RDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGV 137
+ +EQ E AFD +G I+ EL M +GQ T +EL EMI E D +G G
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 138 ISFNEFAAVMAKSTLD 153
+ F+EF +M +S D
Sbjct: 72 VDFDEFLVMMVRSMKD 87
Score = 26.2 bits (56), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 9/34 (26%), Positives = 22/34 (64%)
Query: 43 PSGDQIHVLLANMDANGNGAVEFDELVNAILPDM 76
P+ +++ ++ +D +G+G V+FDE + ++ M
Sbjct: 52 PTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSM 85
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 58/131 (44%), Gaps = 40/131 (30%)
Query: 49 HVLLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLE-IFRAFDRDGNGYITAAEL 107
L +D NG+GAV ++E V A + + I EQLL+ IF++ D DGNG I E
Sbjct: 3 EALFKEIDVNGDGAVSYEE-VKAFVS---KKRAIKNEQLLQLIFKSIDADGNGEIDQNEF 58
Query: 108 A---GSMA-------KMGQPLTYK-------------------------ELTEMIKEADT 132
A GS+ K+G + YK ++ E + +AD
Sbjct: 59 AKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKADA 118
Query: 133 NGDGVISFNEF 143
NGDG I+ EF
Sbjct: 119 NGDGYITLEEF 129
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 90 IFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMI-KEADTNGDGVISFNEFA 144
+F+ D +G+G ++ E+ ++K + + ++L ++I K D +G+G I NEFA
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKK-RAIKNEQLLQLIFKSIDADGNGEIDQNEFA 59
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 126 MIKEADTNGDGVISFNEFAAVMAKS 150
+ KE D NGDG +S+ E A ++K
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKK 29
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 89
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 82 INQEQLLEIFRAFD----RDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGV 137
+ +EQ E AFD +G I+ EL M +GQ T +EL EMI E D +G G
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 138 ISFNEFAAVMAKSTLD 153
+ F+EF +M +S D
Sbjct: 72 VDFDEFLVMMVRSMKD 87
Score = 25.8 bits (55), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 9/34 (26%), Positives = 22/34 (64%)
Query: 43 PSGDQIHVLLANMDANGNGAVEFDELVNAILPDM 76
P+ +++ ++ +D +G+G V+FDE + ++ M
Sbjct: 52 PTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSM 85
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin C
At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 82 INQEQLLEIFRAFD---RDG-NGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGV 137
+ EQ E AFD +D +G I+ EL M +GQ T +EL EMI E D +G G
Sbjct: 12 LTDEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 138 ISFNEFAAVMAKSTLD 153
+ F+EF +M + D
Sbjct: 72 VDFDEFLVMMVRCMKD 87
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 85 EQLLEIFRA----FDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISF 140
E+++ F+A FD DG G I+ EL M +GQ T EL +I E D +G G I F
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDF 75
Query: 141 NEFAAVMAK 149
EF +M +
Sbjct: 76 EEFLVMMVR 84
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 82 INQEQLLEIFRAFD----RDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGV 137
+ +EQ E AFD +G I+ EL M +GQ T +EL EMI E D +G G
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 138 ISFNEFAAVMAKSTLD 153
+ F+E+ +MA+ D
Sbjct: 72 VDFDEWLVMMARCMKD 87
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac Troponin-I(147-
163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain Of
Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 82 INQEQLLEIFRAFD----RDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGV 137
+ +EQ E AFD +G I+ EL M +GQ T +EL EMI E D +G G
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 138 ISFNEFAAVMAKSTLD 153
+ F+EF +M + D
Sbjct: 72 VDFDEFLVMMVRCMKD 87
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 82 INQEQLLEIFRAFD----RDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGV 137
+ +EQ E AFD +G I+ EL M +GQ T +EL EMI E D +G G
Sbjct: 12 LTEEQKNEFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 138 ISFNEFAAVMAKSTLD 153
+ F+EF +M + D
Sbjct: 72 VDFDEFLVMMVRCMKD 87
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 85 EQLLEIFRA----FDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISF 140
E+++ F+A FD DG G I+ L M +GQ T +EL +I+E D +G G I F
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 75
Query: 141 NEFAAVMAK 149
EF +M +
Sbjct: 76 EEFLVMMVR 84
Score = 25.8 bits (55), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 8/36 (22%), Positives = 23/36 (63%)
Query: 43 PSGDQIHVLLANMDANGNGAVEFDELVNAILPDMDE 78
P+ +++ ++ +D +G+G ++F+E + ++ M E
Sbjct: 53 PTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKE 88
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 55/123 (44%), Gaps = 20/123 (16%)
Query: 43 PSGDQI---HVLLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGN 99
P GD H L D + NGAV F++ + + + T+ QE+L F +D + +
Sbjct: 96 PQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTV---QEKLNWAFNLYDINKD 152
Query: 100 GYITAAELAGSMAK----MGQPLTYKELTE---------MIKEADTNGDGVISFNEFAAV 146
GYIT E+ M MG+ TY L E ++ D N DGV++ +EF
Sbjct: 153 GYITKEEMLDIMKAIYDMMGK-CTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIES 211
Query: 147 MAK 149
K
Sbjct: 212 CQK 214
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 6/92 (6%)
Query: 65 FDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELT 124
F E+ + P D T + +F AFD D NG ++ + ++ + + ++L
Sbjct: 87 FKEIYSQFFPQGDSTTYAHF-----LFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLN 141
Query: 125 EMIKEADTNGDGVISFNEFAAVMAKSTLDFFG 156
D N DG I+ E +M K+ D G
Sbjct: 142 WAFNLYDINKDGYITKEEMLDIM-KAIYDMMG 172
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 11/143 (7%)
Query: 7 DQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLAN-----MDANGNG 61
D++N ++ F FD D P+ +I+ +L N M+A
Sbjct: 1 DEINDFKEAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKILGNPSKEEMNAKKIT 60
Query: 62 AVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYK 121
EF ++ A + D+ E +E R FD++GNG + AEL +A +G+ +T +
Sbjct: 61 FEEFLPMLQAAANNKDQGTF---EDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEE 117
Query: 122 ELTEMIK-EADTNGDGVISFNEF 143
E+ E++K + D+N G I++ F
Sbjct: 118 EVEELMKGQEDSN--GCINYEAF 138
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 82 INQEQLLEIFRAFD----RDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGV 137
+ +EQ E AFD +G I+ EL M +GQ T +EL EMI E D +G G
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 138 ISFNEFAAVMAKSTLD 153
+ F+E+ +M + D
Sbjct: 72 VDFDEWLVMMVRCMKD 87
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 11/157 (7%)
Query: 4 LHIDQLNQLRDIFARFDM--DSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNG 61
L D+++ L+D+F FD D P + + + G
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEK 61
Query: 62 AVEFDELVNAI--LPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLT 119
++ F+E + A L D ++ + +E F+ FDR+G G+I+ AEL ++ +G+ L+
Sbjct: 62 SLPFEEFLPAYEGLMDCEQGTFAD---YMEAFKTFDREGQGFISGAELRHVLSGLGERLS 118
Query: 120 YKELTEMIKEADTNGD--GVISFNEFA-AVMAKSTLD 153
+E+ E+I D D G + + EF VMA D
Sbjct: 119 DEEVDEIINLTDLQEDLEGNVKYEEFVKKVMAGPYPD 155
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 81 LINQEQLLEIFRAF---DRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGV 137
++ ++ L EI RAF D D G I+ L ++G+ LT +EL I+E D +GDG
Sbjct: 89 ILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAXIEEFDLDGDGE 148
Query: 138 ISFNEFAAVMAKS 150
I+ NEF A+ S
Sbjct: 149 INENEFIAICTDS 161
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 37/69 (53%)
Query: 84 QEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEF 143
++++ E F FD + +G++ EL + +G L +E+ ++I E D+ G + +++F
Sbjct: 22 KQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLXKYDDF 81
Query: 144 AAVMAKSTL 152
V + L
Sbjct: 82 YIVXGEKIL 90
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 9/142 (6%)
Query: 7 DQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAVEFD 66
DQL + ++ F FD D P+ ++ +L N ++ + D
Sbjct: 7 DQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVD 66
Query: 67 ELVNAILPDMDETILINQ-----EQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYK 121
LP M + + N+ E LE FR FD++GNG + AEL + +G+ +T +
Sbjct: 67 --FETFLP-MLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEE 123
Query: 122 ELTEMIKEADTNGDGVISFNEF 143
E+ E + + +G I++ F
Sbjct: 124 EV-ETVLAGHEDSNGCINYEAF 144
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 55/123 (44%), Gaps = 20/123 (16%)
Query: 43 PSGDQI---HVLLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGN 99
P GD H L DA+GNGA+ F++ V + + T+ E+L F +D + +
Sbjct: 123 PQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTV---HEKLKWAFNLYDINKD 179
Query: 100 GYITAAELAGSMAK----MGQPLTYKELTE---------MIKEADTNGDGVISFNEFAAV 146
G IT E+ M MG+ TY L E ++ D N DGV++ +EF
Sbjct: 180 GCITKEEMLAIMKSIYDMMGRH-TYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLET 238
Query: 147 MAK 149
K
Sbjct: 239 CQK 241
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 90 IFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMAK 149
+F AFD DGNG I + ++ + + +++L D N DG I+ E A+M K
Sbjct: 134 LFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIM-K 192
Query: 150 STLDFFG 156
S D G
Sbjct: 193 SIYDMMG 199
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 11/152 (7%)
Query: 4 LHIDQLNQLRDIFARFDM--DSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNG 61
L D+++ L+D+F FD D P + + + G
Sbjct: 1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEK 59
Query: 62 AVEFDELVNAI--LPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLT 119
++ F+E + A L D ++ + +E F+ FDR+G G+I+ AEL + +G+ L+
Sbjct: 60 SLPFEEFLPAYEGLMDCEQGTFAD---YMEAFKTFDREGQGFISGAELRHVLTALGERLS 116
Query: 120 YKELTEMIKEADTNGD--GVISFNEFA-AVMA 148
+++ E+IK D D G + + +F VMA
Sbjct: 117 DEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 148
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 11/157 (7%)
Query: 4 LHIDQLNQLRDIFARFDM--DSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNG 61
L D+++ L+D+F FD D P + + + G
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEK 61
Query: 62 AVEFDELVNAI--LPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLT 119
++ F+E + A L D ++ + +E F+ FDR+G G+I+ AEL + +G+ L+
Sbjct: 62 SLPFEEFLPAYEGLMDCEQGTFAD---YMEAFKTFDREGQGFISGAELRHVLTALGERLS 118
Query: 120 YKELTEMIKEADTNGD--GVISFNEFA-AVMAKSTLD 153
+++ E+IK D D G + + +F VMA D
Sbjct: 119 DEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAGPYPD 155
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 11/152 (7%)
Query: 4 LHIDQLNQLRDIFARFDM--DSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNG 61
L D+++ L+D+F FD D P + + + G
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEK 61
Query: 62 AVEFDELVNAI--LPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLT 119
++ F+E + A L D ++ + +E F+ FDR+G G+I+ AEL + +G+ L+
Sbjct: 62 SLPFEEFLPAYEGLMDCEQGTFAD---YMEAFKTFDREGQGFISGAELRHVLTALGERLS 118
Query: 120 YKELTEMIKEADTNGD--GVISFNEFA-AVMA 148
+++ E+IK D D G + + +F VMA
Sbjct: 119 DEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 150
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 83 NQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNE 142
++++ E F FD DG G I EL +M +G +E+ +MI E D G G ++F +
Sbjct: 29 QKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGD 88
Query: 143 FAAVMAKS 150
F VM +
Sbjct: 89 FLTVMTQK 96
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 11/149 (7%)
Query: 7 DQLNQLRDIFARFDM--DSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAVE 64
D+++ L+D+F FD D P + + + G ++
Sbjct: 3 DEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLP 61
Query: 65 FDELVNAI--LPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKE 122
F+E + A L D ++ + +E F+ FDR+G G+I+ AEL + +G+ L+ ++
Sbjct: 62 FEEFLPAYEGLMDCEQGTFAD---YMEAFKTFDREGQGFISGAELRHVLTALGERLSDED 118
Query: 123 LTEMIKEADTNGD--GVISFNEFA-AVMA 148
+ E+IK D D G + + +F VMA
Sbjct: 119 VDEIIKLTDLQEDLEGNVKYEDFVKKVMA 147
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 11/149 (7%)
Query: 7 DQLNQLRDIFARFDM--DSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGAVE 64
D+++ L+D+F FD D P + + + G ++
Sbjct: 3 DEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLP 61
Query: 65 FDELVNAI--LPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKE 122
F+E + A L D ++ + +E F+ FDR+G G+I+ AEL + +G+ L+ ++
Sbjct: 62 FEEFLPAYEGLMDCEQGTFAD---YMEAFKTFDREGQGFISGAELRHVLTALGERLSDED 118
Query: 123 LTEMIKEADTNGD--GVISFNEFA-AVMA 148
+ E+IK D D G + + +F VMA
Sbjct: 119 VDEIIKLTDLQEDLEGNVKYEDFVKKVMA 147
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 43 PSGDQ-IHVLLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGY 101
PS ++ + + D N +G ++F E V A+ + + ++L F+ +D DGNG
Sbjct: 48 PSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKV---DQKLRWYFKLYDVDGNGC 104
Query: 102 ITAAELAG------SMAKMGQPLTYKELTEMI-KEADTNGDGVISFNEF 143
I EL ++ + + +T +E T M+ + D NGDG +S EF
Sbjct: 105 IDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEF 153
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 8/100 (8%)
Query: 59 GNGAVEFDELVNAI--LPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQ 116
G ++ F+E + A L D ++ + +E F+ FDR+G G+I+ AEL + +G+
Sbjct: 59 GEKSLPFEEFLPAYEGLMDCEQGTFAD---YMEAFKTFDREGQGFISGAELRHVLTALGE 115
Query: 117 PLTYKELTEMIKEADTNGD--GVISFNEFA-AVMAKSTLD 153
L+ +++ E+IK D D G + + +F VMA D
Sbjct: 116 RLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAGPYPD 155
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 88 LEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGD--GVISFNEFA 144
+E F+ FDR+G G+I+ AEL ++ +G+ L+ +E+ E+I D D G + + EF
Sbjct: 87 MEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEFV 145
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 88 LEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGD--GVISFNEFA 144
+E F+ FDR+G G+I+ AEL ++ +G+ L+ +E+ E+I D D G + + EF
Sbjct: 88 MEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEFV 146
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
Length = 76
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 88 LEIFRAFDRDGNGYITAAELAGSMAKMGQPLT--YKELTEMIKEADTNGDGVISFNEFAA 145
E+F A + D N I+ EL M +G L L EMI+E D NGDG +SF EF
Sbjct: 11 FEVFAAKEGDPN-QISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLV 69
Query: 146 VMAK 149
+M K
Sbjct: 70 MMKK 73
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 18/116 (15%)
Query: 43 PSGD---QIHVLLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGN 99
P GD H L D G+V+F++ V A+ + T+ E+L F +D + +
Sbjct: 47 PHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTV---HEKLRWTFNLYDINKD 103
Query: 100 GYITAAEL---AGSMAKMGQPLTYKELTE---------MIKEADTNGDGVISFNEF 143
GYI E+ ++ M TY L E ++ D N DG+++ +EF
Sbjct: 104 GYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF 159
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 87 LLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAV 146
L E+F+ D D +G IT EL + ++G L E+ +++ AD + G I + EF A
Sbjct: 25 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAA 84
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 89 EIFRAFDRDGNGYITAAELA---GSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEF 143
++F+A D D +G+I EL S A G+ LT E +K AD +GDG I +EF
Sbjct: 46 KVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEF 103
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 18/116 (15%)
Query: 43 PSGD---QIHVLLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGN 99
P GD H L D G+V+F++ V A+ + T+ E+L F +D + +
Sbjct: 47 PHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTV---HEKLRWTFNLYDINKD 103
Query: 100 GYITAAEL---AGSMAKMGQPLTYKELTE---------MIKEADTNGDGVISFNEF 143
GYI E+ ++ M TY L E ++ D N DG+++ +EF
Sbjct: 104 GYINKEEMMDIVKAIYDMMGAYTYPVLAEDTPRQHVDVFFQKMDKNKDGIVTLDEF 159
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 18/116 (15%)
Query: 43 PSGD---QIHVLLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGN 99
P GD H L D G+V+F++ V A+ + T+ E+L F +D + +
Sbjct: 50 PHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTV---HEKLRWTFNLYDINKD 106
Query: 100 GYITAAEL---AGSMAKMGQPLTYKELTE---------MIKEADTNGDGVISFNEF 143
GYI E+ ++ M TY L E ++ D N DG+++ +EF
Sbjct: 107 GYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF 162
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 18/116 (15%)
Query: 43 PSGD---QIHVLLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGN 99
P GD H L D G+V+F++ V A+ + T+ E+L F +D + +
Sbjct: 83 PHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTV---HEKLRWTFNLYDINKD 139
Query: 100 GYITAAEL---AGSMAKMGQPLTYKELTE---------MIKEADTNGDGVISFNEF 143
GYI E+ ++ M TY L E ++ D N DG+++ +EF
Sbjct: 140 GYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF 195
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 9/114 (7%)
Query: 42 KPSGDQIHVLLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGY 101
+ + I + D N +G V+F E + A+ M E + +++L F+ +D DGNG
Sbjct: 53 QKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKM---EQKLKWYFKLYDADGNGS 109
Query: 102 ITAAEL-----AGSMAKMGQPLTYKELTEMI-KEADTNGDGVISFNEFAAVMAK 149
I EL A Q L+ +E ++ + D N DG ++ EF MAK
Sbjct: 110 IDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMAK 163
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 67/148 (45%), Gaps = 13/148 (8%)
Query: 7 DQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLAN--MDANGNGAVE 64
+Q + ++ F FD D P+ ++ +L N D ++
Sbjct: 4 EQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLK 63
Query: 65 FDELVNAILPDMDETILINQEQ-----LLEIFRAFDRDGNGYITAAELAGSMAKMGQPLT 119
F++ LP M +TI N++Q +E R FD++GNG + AE+ + +G+ +T
Sbjct: 64 FEQF----LPMM-QTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMT 118
Query: 120 YKELTEMIKEADTNGDGVISFNEFAAVM 147
+E+ +++ + +G I++ E ++
Sbjct: 119 EEEVEQLVA-GHEDSNGCINYEELVRMV 145
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 67/148 (45%), Gaps = 13/148 (8%)
Query: 7 DQLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLAN--MDANGNGAVE 64
+Q + ++ F FD D P+ ++ +L N D ++
Sbjct: 6 EQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLK 65
Query: 65 FDELVNAILPDMDETILINQEQ-----LLEIFRAFDRDGNGYITAAELAGSMAKMGQPLT 119
F++ LP M +TI N++Q +E R FD++GNG + AE+ + +G+ +T
Sbjct: 66 FEQF----LPMM-QTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMT 120
Query: 120 YKELTEMIKEADTNGDGVISFNEFAAVM 147
+E+ +++ + +G I++ E ++
Sbjct: 121 EEEVEQLVA-GHEDSNGCINYEELVRMV 147
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 11/138 (7%)
Query: 12 LRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLAN-----MDANGNGAVEFD 66
++ F FD D P+ +I+ +L N M+A EF
Sbjct: 10 FKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFL 69
Query: 67 ELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEM 126
++ A + D+ E +E R FD++GNG + AEL +A +G+ +T +E+ E+
Sbjct: 70 PMLQAAANNKDQGTF---EDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEEL 126
Query: 127 IK-EADTNGDGVISFNEF 143
+K + D+N G I++ F
Sbjct: 127 MKGQEDSN--GCINYEAF 142
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 39.3 bits (90), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 11/138 (7%)
Query: 12 LRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLAN-----MDANGNGAVEFD 66
++ F FD D P+ +I+ +L N M+A EF
Sbjct: 8 FKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFL 67
Query: 67 ELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEM 126
++ A + D+ E +E R FD++GNG + AEL +A +G+ +T +E+ E+
Sbjct: 68 PMLQAAANNKDQGTF---EDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEEL 124
Query: 127 IK-EADTNGDGVISFNEF 143
+K + D+N G I++ F
Sbjct: 125 MKGQEDSN--GCINYEAF 140
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 38/70 (54%)
Query: 74 PDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTN 133
++D T E ++ F+ FD++ G ++ +L + +G+ LT E+ E++K + +
Sbjct: 72 KELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVD 131
Query: 134 GDGVISFNEF 143
+G I + +F
Sbjct: 132 SNGEIDYKKF 141
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 84 QEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEF 143
Q++ E F+ FD+D + +TA EL M +G T ++++E++K+ D + G F
Sbjct: 13 QQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETF 72
Query: 144 AAVM 147
+M
Sbjct: 73 LTIM 76
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%)
Query: 87 LLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEF 143
L FR DRDG+ + A E +AK+G L E + ++ D NG G + EF
Sbjct: 39 LARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEF 95
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 51 LLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGS 110
+ D NG+G ++ +E + A+ P M + + + F DR G+G +T +L G
Sbjct: 78 VCRKWDRNGSGTLDLEEFLRALRPPMSQA---REAVIAAAFAKLDRSGDGVVTVDDLRGV 134
Query: 111 MAKMGQP-LTYKELTE 125
+ P + E TE
Sbjct: 135 YSGRAHPKVRSGEWTE 150
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%)
Query: 99 NGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMAKSTLD 153
+G I+ EL +GQ T +EL E I E D +G G + F+EF + D
Sbjct: 33 DGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTVDFDEFLVXXVRCXKD 87
>pdb|1WY9|A Chain A, Crystal Structure Of Microglia-Specific Protein, Iba1
Length = 147
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 88 LEIFRA----FDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEF 143
LE F+ FD +GNG I L + K+G P T+ EL +I+E + + S+++F
Sbjct: 47 LEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDF 106
Query: 144 AAVM 147
+M
Sbjct: 107 LRMM 110
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 12/62 (19%)
Query: 91 FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELT---------EMIKEADTNGDGVISFN 141
F+ D +G+GY+TA EL M + YK L+ ++IK AD N DG IS
Sbjct: 13 FKKLDANGDGYVTALELQTFMVTLD---AYKALSKDKVKEASAKLIKMADKNSDGKISKE 69
Query: 142 EF 143
EF
Sbjct: 70 EF 71
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 86 QLLEIFRAFDRDGNGYITAAELAGSM---AKMGQPLTYKELTEMIKEADTNGDGVISFNE 142
Q+ E+F D+D +G+I EL G + + G+ L E ++ D++ DG I +E
Sbjct: 42 QVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADE 101
Query: 143 FAAVMAKS 150
FA ++A++
Sbjct: 102 FAKMVAQA 109
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 49 HVLLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLE-IFRAFDRDGNGYITAAEL 107
L +D NG+GAV ++E V A + + I EQLL+ IF++ D DGNG I E
Sbjct: 3 EALFKEIDVNGDGAVSYEE-VKAFVS---KKRAIKNEQLLQLIFKSIDADGNGEIDQNEF 58
Query: 108 A 108
A
Sbjct: 59 A 59
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 90 IFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMI-KEADTNGDGVISFNEFA 144
+F+ D +G+G ++ E+ ++K + + ++L ++I K D +G+G I NEFA
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKK-RAIKNEQLLQLIFKSIDADGNGEIDQNEFA 59
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 126 MIKEADTNGDGVISFNEFAAVMAKS 150
+ KE D NGDG +S+ E A ++K
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKK 29
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 90 IFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEF 143
+FR +DRD +G I EL +++ G L+ + +I++ D G G I+F++F
Sbjct: 75 VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 128
Score = 35.0 bits (79), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 10/62 (16%)
Query: 45 GDQIH-VLLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYIT 103
DQ H +L+ D G G + FD+ + + +L ++L +IFR +D D +G+I
Sbjct: 104 SDQFHDILIRKFDRQGRGQIAFDDFIQGCI------VL---QRLTDIFRRYDTDQDGWIQ 154
Query: 104 AA 105
+
Sbjct: 155 VS 156
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 90 IFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEF 143
+FR +DRD +G I EL +++ G L+ + +I++ D G G I+F++F
Sbjct: 79 VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 132
Score = 35.0 bits (79), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 10/62 (16%)
Query: 45 GDQIH-VLLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYIT 103
DQ H +L+ D G G + FD+ + I ++L +IFR +D D +G+I
Sbjct: 108 SDQFHDILIRKFDRQGRGQIAFDDFIQG---------CIVLQRLTDIFRRYDTDQDGWIQ 158
Query: 104 AA 105
+
Sbjct: 159 VS 160
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 90 IFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEF 143
+FR +DRD +G I EL +++ G L+ + +I++ D G G I+F++F
Sbjct: 76 VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 129
Score = 35.0 bits (79), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 10/62 (16%)
Query: 45 GDQIH-VLLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYIT 103
DQ H +L+ D G G + FD+ + + +L ++L +IFR +D D +G+I
Sbjct: 105 SDQFHDILIRKFDRQGRGQIAFDDFIQGCI------VL---QRLTDIFRRYDTDQDGWIQ 155
Query: 104 AA 105
+
Sbjct: 156 VS 157
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 90 IFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEF 143
+FR +DRD +G I EL +++ G L+ + +I++ D G G I+F++F
Sbjct: 98 VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 151
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 10/62 (16%)
Query: 45 GDQIH-VLLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYIT 103
DQ H +L+ D G G + FD+ + + +L ++L +IFR +D D +G+I
Sbjct: 127 SDQFHDILIRKFDRQGRGQIAFDDFIQGCI------VL---QRLTDIFRRYDTDQDGWIQ 177
Query: 104 AA 105
+
Sbjct: 178 VS 179
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 20/114 (17%)
Query: 48 IHVLLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAEL 107
+ + D NG+ ++F E V A+ + T+ + +L F+ +D+D NG I EL
Sbjct: 61 VEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTL---EHKLKWTFKIYDKDRNGCIDRQEL 117
Query: 108 ---AGSMAKM-------------GQPLTYKELTEMI-KEADTNGDGVISFNEFA 144
S+ K+ G+ LT +E+ + I D NGDG +S NEF
Sbjct: 118 LDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFV 171
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 90 IFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEF 143
+FR +DRD +G I EL +++ G L+ + +I++ D G G I+F++F
Sbjct: 97 VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 150
Score = 35.0 bits (79), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 10/62 (16%)
Query: 45 GDQIH-VLLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYIT 103
DQ H +L+ D G G + FD+ + + +L ++L +IFR +D D +G+I
Sbjct: 126 SDQFHDILIRKFDRQGRGQIAFDDFIQGCI------VL---QRLTDIFRRYDTDQDGWIQ 176
Query: 104 AA 105
+
Sbjct: 177 VS 178
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 86 QLLEIFRAFDRDGNGYITAAELAGSMAKM---GQPLTYKELTEMIKEADTNGDGVISFNE 142
Q+ +IFR D D +GY+ EL + K + LT E ++ AD +GDG I +E
Sbjct: 42 QVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADE 101
Query: 143 FAAVM 147
F ++
Sbjct: 102 FQEMV 106
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 90 IFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEF 143
+FR +DRD +G I EL +++ G L+ + +I++ D G G I+F++F
Sbjct: 79 VFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDILIRKFDRQGRGQIAFDDF 132
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 10/62 (16%)
Query: 45 GDQIH-VLLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYIT 103
DQ H +L+ D G G + FD+ + I ++L +IFR +D D +G+I
Sbjct: 108 SDQFHDILIRKFDRQGRGQIAFDDFIQG---------CIVLQRLTDIFRRYDTDQDGWIQ 158
Query: 104 AA 105
+
Sbjct: 159 VS 160
>pdb|1SJJ|A Chain A, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
pdb|1SJJ|B Chain B, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
Length = 863
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 82 INQEQLLEIFRA----FDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGV 137
I+QEQ+ E FRA FDR G + + + MG + E ++ D N GV
Sbjct: 719 ISQEQMNE-FRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGV 777
Query: 138 ISFNEFAAVMAKSTLD 153
++F F M++ T D
Sbjct: 778 VTFQAFIDFMSRETAD 793
>pdb|2D58|A Chain A, Human Microglia-Specific Protein Iba1
Length = 107
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%)
Query: 77 DETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDG 136
DE + E E + FD +GNG I L + K+G P T+ EL ++I E +
Sbjct: 24 DEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGE 83
Query: 137 VISFNEFAAVM 147
S+ +F +M
Sbjct: 84 TFSYPDFLRMM 94
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 74 PDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKM-GQPLTYKELTEM----IK 128
P E + + +L F+ +D D +G I+ E+ + M G +T ++L + ++
Sbjct: 103 PKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQ 162
Query: 129 EADTNGDGVISFNEFAAVMAK 149
EAD +GDG +SF EF + K
Sbjct: 163 EADEDGDGAVSFVEFTKSLEK 183
Score = 26.6 bits (57), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 10/84 (11%)
Query: 71 AILPDMDETIL---INQEQLLEI---FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELT 124
A++PD D +Q LL + FRA DR+ GY++ +L A PL +
Sbjct: 9 AVIPDGDSIRRETGFSQASLLRLHHRFRALDRNKKGYLSRMDLQQIGALAVNPLGDR--- 65
Query: 125 EMIKEADTNGDGVISFNEFAAVMA 148
+I+ +G + F F V+A
Sbjct: 66 -IIESFFPDGSQRVDFPGFVRVLA 88
>pdb|1K95|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|B Chain B, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
Length = 165
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 89 EIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMA 148
E F D+DG+G + EL ++ MG L+ + LT ++K NG I F+++ A
Sbjct: 74 ENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGR--IFFDDYVACCV 131
Query: 149 K--STLDFF 155
K + DFF
Sbjct: 132 KLRALTDFF 140
>pdb|1F4O|A Chain A, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4O|B Chain B, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4Q|A Chain A, Crystal Structure Of Apo Grancalcin
pdb|1F4Q|B Chain B, Crystal Structure Of Apo Grancalcin
Length = 165
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 89 EIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMA 148
E F D+DG+G + EL ++ MG L+ + LT ++K NG I F+++ A
Sbjct: 74 ENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGR--IFFDDYVACCV 131
Query: 149 K--STLDFF 155
K + DFF
Sbjct: 132 KLRALTDFF 140
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 89 EIFRAFDRDGNGYITAAELAGSMAKM----GQPLTYKELTEMIKEADTNGDGVISFNEFA 144
++F D+D +G+I EL GS+ K + L+ KE ++ D +GDG I EF+
Sbjct: 9 KVFHILDKDKSGFIEEDEL-GSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFS 67
Query: 145 AVMAKS 150
++A+S
Sbjct: 68 TLVAES 73
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 83 NQEQLLEIFRAFDRDGNGYITAAELAGSMAKM----GQPLTYKELTEMIKEADTNGDGVI 138
+ + + ++F D+D +G+I EL GS+ K + L+ KE ++ D +GDG I
Sbjct: 39 SADDVKKVFHILDKDKDGFIDEDEL-GSILKGFSSDARDLSAKETKTLMAAGDKDGDGKI 97
Query: 139 SFNEFAAVMAKS 150
EF+ ++A+S
Sbjct: 98 GVEEFSTLVAES 109
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 90 IFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEF 143
+++ D DG+G +T E+ K G +++ E + +AD NGDG I+ EF
Sbjct: 10 LYKLMDVDGDGKLTKEEVTSFFKKHG----IEKVAEQVMKADANGDGYITLEEF 59
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 83 NQEQLLEIFRAFDRDGNGYITAAELAGSMAKM---GQPLTYKELTEMIKEADTNGDGVIS 139
+ QL EIFR D D +G+I EL + + + LT E + AD +GDG I
Sbjct: 39 SSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIG 98
Query: 140 FNEF 143
EF
Sbjct: 99 AEEF 102
>pdb|2G2B|A Chain A, Nmr Structure Of The Human Allograft Inflammatory Factor 1
Length = 150
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%)
Query: 77 DETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDG 136
DE + E E + FD +GNG I L + K+G P T+ EL ++I E +
Sbjct: 43 DEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGE 102
Query: 137 VISFNEFAAVM 147
S+ +F +M
Sbjct: 103 TFSYPDFLRMM 113
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 89 EIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMA 148
+F FD+D NG+I E ++ + ++L+ + D N DG I+F+E ++A
Sbjct: 67 HLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVA 126
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 9/61 (14%)
Query: 56 DANGNGAVEFDEL---VNAILPDMDETILINQEQ------LLEIFRAFDRDGNGYITAAE 106
D N +G + FDE+ V ++ M + +N+++ + +IF+ D++ +GYIT E
Sbjct: 109 DLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDE 168
Query: 107 L 107
Sbjct: 169 F 169
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 89 EIFRAFDRDGNGYITAAELAGSMAKM----GQPLTYKELTEMIKEADTNGDGVISFNEFA 144
++F D+D +G+I EL GS+ K + L+ KE ++ D +GDG I EF+
Sbjct: 45 KVFHILDKDKSGFIEEDEL-GSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFS 103
Query: 145 AVMAKS 150
++A+S
Sbjct: 104 TLVAES 109
>pdb|2LVV|A Chain A, Nmr Structure Of Tb24
Length = 226
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 86 QLLEIFRAFDRDGNGYITAAELAGSMAKMGQP-LTYKELTEMIKEADTNGDGVISFNEFA 144
+L +F D+DG+ + E ++ K+ + + + T + E DTNG GV++F+EF+
Sbjct: 134 ELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDITDATTVFNEIDTNGSGVVTFDEFS 193
Query: 145 AVMAKSTLDFFG 156
L G
Sbjct: 194 CWAVTKKLQVCG 205
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 86 QLLEIFRAFDRDGNGYITAAELAGSMAKM---GQPLTYKELTEMIKEADTNGDGVISFNE 142
Q+ ++FR D D +GY+ EL + K + LT E ++ AD +GDG I E
Sbjct: 43 QVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAEE 102
Query: 143 F 143
F
Sbjct: 103 F 103
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 91 FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVM 147
F FD + +G+I L + MG T +E+ EM +EA + G ++ EF ++
Sbjct: 82 FACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRIL 138
Score = 26.2 bits (56), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 82 INQEQLLEIFRAF---DRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+Q Q+ E AF D++ +G+I +L +A MG+ T + L M+ EA G I
Sbjct: 1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSEA----PGPI 56
Query: 139 SFNEFAAVMAKS 150
+F F + +
Sbjct: 57 NFTMFLTMFGEK 68
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 35.0 bits (79), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 10/62 (16%)
Query: 45 GDQIH-VLLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYIT 103
DQ H +L+ D G G + FD+ + + +L ++L +IFR +D D +G+I
Sbjct: 103 SDQFHDILIRKFDRQGRGQIAFDDFIQGCI------VL---QRLTDIFRRYDTDQDGWIQ 153
Query: 104 AA 105
+
Sbjct: 154 VS 155
Score = 33.1 bits (74), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 90 IFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEF 143
+FR +DRD +G I EL +++ G L+ + +I++ D G G I+F++F
Sbjct: 76 VFRTYDRDNSGMIDKNELKQALS--GYRLSDQFHDILIRKFDRQGRGQIAFDDF 127
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 35.0 bits (79), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 85 EQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNG--DGVISFNE 142
++ +E F+ FDR+G G I++AE+ + +G+ +T + ++ D DG I + +
Sbjct: 85 DEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYED 144
Query: 143 F-AAVMA 148
VMA
Sbjct: 145 LMKKVMA 151
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 35.0 bits (79), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 89 EIFRAFDRDGNGYITAAELAGSMAKMGQP----LTYKELTEMIKEADTNGDGVISFNEFA 144
++F D+D +G+I EL G + K P L+ KE ++ D +GDG I +EF+
Sbjct: 46 KVFHMLDKDKSGFIEEDEL-GFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIGVDEFS 104
Query: 145 AVMAKS 150
++A+S
Sbjct: 105 TLVAES 110
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 89 EIFRAFDRDGNGYITAAELAGSMAKM----GQPLTYKELTEMIKEADTNGDGVISFNEFA 144
++F D+D +G+I EL GS+ K L+ KE ++ D +GDG I EF+
Sbjct: 45 KVFHILDKDKSGFIEEDEL-GSILKGFSSDAADLSAKETKTLMAAGDKDGDGKIGVEEFS 103
Query: 145 AVMAKS 150
++A+S
Sbjct: 104 TLVAES 109
Score = 26.2 bits (56), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 33/67 (49%)
Query: 42 KPSGDQIHVLLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGY 101
K S D + + +D + +G +E DEL + + + ++ ++ + A D+DG+G
Sbjct: 37 KKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDGDGK 96
Query: 102 ITAAELA 108
I E +
Sbjct: 97 IGVEEFS 103
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 34.3 bits (77), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 87 LLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAV 146
++ F FD +G+G L S+ G+ + E+ + + EA +G+G+I +FA +
Sbjct: 128 IVNAFNLFD-EGDGKCKEETLKRSLTTWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQI 186
Query: 147 MAK 149
+ K
Sbjct: 187 LTK 189
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 85 EQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFA 144
++ E F+ D+D +G+I+ ++ + +G+ T +EL M+ EA G I+F F
Sbjct: 57 QEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPINFTMFL 112
Query: 145 AVMA 148
+
Sbjct: 113 TIFG 116
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 34.3 bits (77), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 91 FRAFDRDGNGYITAAELAGSMAKM-GQPLTYKELTEM----IKEADTNGDGVISFNEFAA 145
FR +D D + I+ EL + M G ++ ++L + I+EAD +GD ISF EF
Sbjct: 119 FRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVK 178
Query: 146 VMAK 149
V+ K
Sbjct: 179 VLEK 182
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 34.3 bits (77), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 91 FRAFDRDGNGYITAAELAGSMAKM-GQPLTYKELTEM----IKEADTNGDGVISFNEFAA 145
FR +D D + I+ EL + M G ++ ++L + I+EAD +GD ISF EF
Sbjct: 119 FRLYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVK 178
Query: 146 VMAK 149
V+ K
Sbjct: 179 VLEK 182
>pdb|1BOD|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 74
Score = 33.9 bits (76), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 14/73 (19%)
Query: 85 EQLLEIFRAFDRDGNGYIT--------AAELAGSMAKMGQPLTYKELTEMIKEADTNGDG 136
E+L IF +D++G+G ++ E + M L E+ +E D NGDG
Sbjct: 5 EELKGIFEKYDKEGDGQLSKEELKLLLQTEFPSLLKGMST------LDELFEELDKNGDG 58
Query: 137 VISFNEFAAVMAK 149
+SF EF ++ K
Sbjct: 59 EVSFEEFQVLVKK 71
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 33.5 bits (75), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 89 EIFRAFDRDGNGYITAAELAGSMAKM----GQPLTYKELTEMIKEADTNGDGVISFNEFA 144
++F D+D +G+I EL GS+ K + L+ KE ++ D +G G I EF+
Sbjct: 45 KVFHILDKDKSGFIEEDEL-GSILKGFSSDARDLSAKETKTLMAAGDKDGSGKIEVEEFS 103
Query: 145 AVMAKS 150
++A+S
Sbjct: 104 TLVAES 109
Score = 26.2 bits (56), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 33/67 (49%)
Query: 42 KPSGDQIHVLLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGY 101
K S D + + +D + +G +E DEL + + + ++ ++ + A D+DG+G
Sbjct: 37 KKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGSGK 96
Query: 102 ITAAELA 108
I E +
Sbjct: 97 IEVEEFS 103
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 33.5 bits (75), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 15/101 (14%)
Query: 55 MDANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAE-------- 106
D N +G +EF E + A+ T+ E+L F+ +D D +GYIT E
Sbjct: 72 FDENKDGRIEFSEFIQALSVTSRGTL---DEKLRWAFKLYDLDNDGYITRNEMLDIVDAI 128
Query: 107 --LAGSMAKMGQP--LTYKELTEMIKEADTNGDGVISFNEF 143
+ G+ ++ + K + + D N DG ++ EF
Sbjct: 129 YQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEF 169
>pdb|2JJZ|B Chain B, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|C Chain C, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|D Chain D, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2VTG|A Chain A, Crystal Structure Of Human Iba2, Trigonal Crystal Form
Length = 150
Score = 33.1 bits (74), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 89 EIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVM 147
E + FD + G I L M K+G P T+ E+ +MI E IS+ +F +M
Sbjct: 54 EKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMM 112
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 33.1 bits (74), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 91 FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMAK 149
F +FD D +G + EL ++ MG L+ + + + K TNG I+F+++ A K
Sbjct: 109 FISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTNGK--ITFDDYIACCVK 165
>pdb|2JJZ|A Chain A, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
Length = 150
Score = 33.1 bits (74), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 89 EIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVM 147
E + FD + G I L M K+G P T+ E+ +MI E IS+ +F +M
Sbjct: 54 EKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMM 112
>pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain
pdb|1QXP|B Chain B, Crystal Structure Of A Mu-Like Calpain
Length = 900
Score = 33.1 bits (74), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 16/98 (16%)
Query: 55 MDANGNGA---VEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSM 111
MD +GNG VEF+ L N I L IFR FD D +G ++A E+ ++
Sbjct: 586 MDRDGNGKLGLVEFNILWNRI------------RNYLTIFRKFDLDKSGSMSAYEMRMAI 633
Query: 112 AKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMAK 149
G L +L ++I + + +I F+ F + +
Sbjct: 634 EAAGFKLPC-QLHQVIVARFADDELIIDFDNFVRCLVR 670
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 32.7 bits (73), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 85 EQLLEIFRAFDRDGNGYITAAELA---GSMAKMGQPLTYKELTEMIKEADTNGDGVISFN 141
+Q+ ++F D+D +G+I EL + + + LT E + DT+GDG I
Sbjct: 41 DQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVE 100
Query: 142 EFAAVM 147
EF +++
Sbjct: 101 EFQSLV 106
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 32.7 bits (73), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 85 EQLLEIFRAFDRDGNGYITAAELA---GSMAKMGQPLTYKELTEMIKEADTNGDGVISFN 141
+Q+ ++F D+D +G+I EL + + + LT E + DT+GDG I
Sbjct: 42 DQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVE 101
Query: 142 EFAAVM 147
EF +++
Sbjct: 102 EFQSLV 107
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 91 FRAFDRDGNGYITAAELA---GSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVM 147
F D+D +G+I EL + + + LT E + + D +GDG+I +EFAA++
Sbjct: 47 FYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMI 106
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 8/77 (10%)
Query: 78 ETILINQEQLLEIFRAFDRDGNGYITAAELAG-------SMAKMGQPLTYKELTEMIKEA 130
++ LI Q EI+ FD DG+GY+ EL + K G L+ E+ + +
Sbjct: 9 QSSLITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELS-PEMKTFVDQY 67
Query: 131 DTNGDGVISFNEFAAVM 147
DG I E A V+
Sbjct: 68 GQRDDGKIGIVELAHVL 84
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 50 VLLANMDANGNGAVEFDELVNAILPDMDETILINQ------EQLLEIFRAFDRDGNGYIT 103
++L D+N +G +E E+ +LP + +L Q ++ + F +D+DGNGYI
Sbjct: 151 LMLKLFDSNNDGKLELTEMAR-LLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYID 209
Query: 104 AAEL 107
EL
Sbjct: 210 ENEL 213
Score = 30.8 bits (68), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Query: 81 LINQEQLLEIFRAFDRDGNGYITAAELAGSMA----KMGQPLTYKELTE----MIKEADT 132
L + E+ ++ +R +D D +G+I EL + K + + +L E M+K D+
Sbjct: 99 LKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDS 158
Query: 133 NGDGVISFNEFAAVM 147
N DG + E A ++
Sbjct: 159 NNDGKLELTEMARLL 173
>pdb|1BOC|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 76
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 85 EQLLEIFRAF-DRDGNGYITAAELAGSMAKMGQPLTYK---ELTEMIKEADTNGDGVISF 140
E+L IF + D++G+G + E + + P K L E+ +E D NGDG +SF
Sbjct: 5 EELKGIFEKYADKEGDGNQLSKEELKLLLQTEFPSLLKGMSTLDELFEELDKNGDGEVSF 64
Query: 141 NEFAAVMAK 149
EF ++ K
Sbjct: 65 EEFQVLVKK 73
>pdb|2QAC|A Chain A, The Closed Mtip-myosina-tail Complex From The Malaria
Parasite Invasion Machinery
pdb|4AOM|A Chain A, Mtip And Myoa Complex
Length = 146
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 83 NQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKE 122
N E+L+++F FD + GY+T +++ + G LT +E
Sbjct: 82 NVEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQE 121
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 85 EQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFA 144
+++ E F D++ +G+I +L + +G+ KELT M+KEA G ++F F
Sbjct: 2 QEMKEAFTMIDQNRDGFIDINDLKEEFSSLGRTPDDKELTAMLKEA----PGPLNFTMFL 57
Query: 145 AVMA 148
++ +
Sbjct: 58 SIFS 61
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 139
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 7/70 (10%)
Query: 82 INQEQLLEIFRAF---DRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ Q+Q+ E+ AF D D +G+++ ++ ++G+ KELT M+KEA G +
Sbjct: 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEA----PGPL 56
Query: 139 SFNEFAAVMA 148
+F F ++ +
Sbjct: 57 NFTMFLSIFS 66
>pdb|1IG5|A Chain A, Bovine Calbindin D9k Binding Mg2+
pdb|1IGV|A Chain A, Bovine Calbindin D9k Binding Mn2+
pdb|3ICB|A Chain A, The Refined Structure Of Vitamin D-Dependent Calcium-
Binding Protein From Bovine Intestine. Molecular
Details, Ion Binding, And Implications For The Structure
Of Other Calcium-Binding Proteins
Length = 75
Score = 31.2 bits (69), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 123 LTEMIKEADTNGDGVISFNEFAAVMAK 149
L E+ +E D NGDG +SF EF ++ K
Sbjct: 46 LDELFEELDKNGDGEVSFEEFQVLVKK 72
>pdb|4ICB|A Chain A, Proline Cis-Trans Isomers In Calbindin D9k Observed By X-
Ray Crystallography
Length = 76
Score = 31.2 bits (69), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 123 LTEMIKEADTNGDGVISFNEFAAVMAK 149
L E+ +E D NGDG +SF EF ++ K
Sbjct: 47 LDELFEELDKNGDGEVSFEEFQVLVKK 73
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 31.2 bits (69), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 84 QEQLLEIFRAF---DRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISF 140
Q+Q+ E+ AF D D +G+++ ++ ++G+ KELT M+KEA G ++F
Sbjct: 2 QKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEA----PGPLNF 57
Query: 141 NEFAAVMA 148
F ++ +
Sbjct: 58 TMFLSIFS 65
>pdb|1N65|A Chain A, Family Of Nmr Solution Structures Of Ca Ce Calbindin D9k
In Denaturating Conditions
Length = 75
Score = 31.2 bits (69), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 123 LTEMIKEADTNGDGVISFNEFAAVMAK 149
L E+ +E D NGDG +SF EF ++ K
Sbjct: 46 LDELFEELDKNGDGEVSFEEFQVLVKK 72
>pdb|3CS1|A Chain A, Flagellar Calcium-binding Protein (fcabp) From T. Cruzi
Length = 219
Score = 31.2 bits (69), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 86 QLLEIFRAFDRDGNGYITAAELAGSMAKM-GQPLTYKELTEMIKEADTNGDGVISFNEFA 144
+L +F D GN + E ++ K+ ++ + KE D NG G ++F+EFA
Sbjct: 131 ELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGSVTFDEFA 190
Query: 145 AVMAKSTLD 153
A + LD
Sbjct: 191 AWASAVKLD 199
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 47 QIHVLLANMDANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAE 106
++ V+ +DA+GN V+ +E A+ P + E E +F+ D++G G +T E
Sbjct: 131 ELTVMFDEIDASGNMLVDEEEFKRAV-PKL-EAWGAKVEDPAALFKELDKNGTGSVTFDE 188
Query: 107 LAG 109
A
Sbjct: 189 FAA 191
>pdb|2BCB|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
pdb|1B1G|A Chain A, Solvated Refinement Of Ca-Loaded Calbindin D9k
Length = 75
Score = 31.2 bits (69), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 123 LTEMIKEADTNGDGVISFNEFAAVMAK 149
L E+ +E D NGDG +SF EF ++ K
Sbjct: 46 LDELFEELDKNGDGEVSFEEFQVLVKK 72
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 31.2 bits (69), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 7/70 (10%)
Query: 82 INQEQLLEIFRAF---DRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ Q+Q+ E+ AF D++ +G+I +L + +G+ KELT M+KEA G +
Sbjct: 13 LPQKQIQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEA----PGPL 68
Query: 139 SFNEFAAVMA 148
+F F ++ +
Sbjct: 69 NFTMFLSIFS 78
>pdb|1CDN|A Chain A, Solution Structure Of (Cd2+)1-Calbindin D9k Reveals
Details Of The Stepwise Structural Changes Along The
Apo--> (Ca2+) Ii1--> (Ca2+)i,Ii2 Binding Pathway
pdb|1CLB|A Chain A, Determination Of The Solution Structure Of Apo Calbindin
D9k By Nmr Spectroscopy
pdb|2BCA|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
Length = 76
Score = 31.2 bits (69), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 123 LTEMIKEADTNGDGVISFNEFAAVMAK 149
L E+ +E D NGDG +SF EF ++ K
Sbjct: 47 LDELFEELDKNGDGEVSFEEFQVLVKK 73
>pdb|1KCY|A Chain A, Nmr Solution Structure Of Apo Calbindin D9k (F36g + P43m
Mutant)
Length = 75
Score = 31.2 bits (69), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 123 LTEMIKEADTNGDGVISFNEFAAVMAK 149
L E+ +E D NGDG +SF EF ++ K
Sbjct: 46 LDELFEELDKNGDGEVSFEEFQVLVKK 72
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 31.2 bits (69), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 7/70 (10%)
Query: 82 INQEQLLEIFRAF---DRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ Q+Q+ E+ AF D D +G+++ ++ ++G+ KELT M+KEA G +
Sbjct: 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEA----PGPL 56
Query: 139 SFNEFAAVMA 148
+F F ++ +
Sbjct: 57 NFTMFLSIFS 66
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 30.8 bits (68), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 85 EQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFA 144
+++ E F D D +G+++ ++ ++G+ KELT M+KEA G ++F F
Sbjct: 4 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEA----PGPLNFTMFL 59
Query: 145 AVMA 148
++ +
Sbjct: 60 SIFS 63
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 30.8 bits (68), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 95 DRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNE 142
D++ +G I A E A + +G ++ E E + DTNG+G +S +E
Sbjct: 112 DKNADGQINADEFAAWLTALG--MSKAEAAEAFNQVDTNGNGELSLDE 157
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 30.8 bits (68), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 7/70 (10%)
Query: 82 INQEQLLEIFRAF---DRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVI 138
+ Q+Q+ E+ AF D D +G+++ ++ ++G+ KELT M+KEA G +
Sbjct: 12 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEA----PGPL 67
Query: 139 SFNEFAAVMA 148
+F F ++ +
Sbjct: 68 NFTMFLSIFS 77
>pdb|1HT9|A Chain A, Domain Swapping Ef-Hands
pdb|1HT9|B Chain B, Domain Swapping Ef-Hands
Length = 76
Score = 30.8 bits (68), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 123 LTEMIKEADTNGDGVISFNEFAAVMAK 149
L E+ +E D NGDG +SF EF ++ K
Sbjct: 47 LDELFEELDKNGDGEVSFEEFQVLVKK 73
>pdb|1KSM|A Chain A, Average Nmr Solution Structure Of Ca Ln Calbindin D9k
pdb|1KQV|A Chain A, Family Of Nmr Solution Structures Of Ca Ln Calbindin D9k
Length = 79
Score = 30.8 bits (68), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 123 LTEMIKEADTNGDGVISFNEFAAVMAK 149
L E+ +E D NGDG +SF EF ++ K
Sbjct: 50 LDELFEELDKNGDGEVSFEEFQVLVKK 76
>pdb|3LCP|C Chain C, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
pdb|3LCP|D Chain D, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
Length = 93
Score = 30.8 bits (68), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 12/76 (15%)
Query: 84 QEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQ-------PL-TYKELTEMI----KEAD 131
QE L F+ D DGN + EL+ ++ + + PL + EL +I ++ D
Sbjct: 17 QELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDD 76
Query: 132 TNGDGVISFNEFAAVM 147
N DG I + EFA +
Sbjct: 77 KNNDGYIDYAEFAKSL 92
>pdb|1GJY|A Chain A, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|B Chain B, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|C Chain C, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|D Chain D, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
Length = 167
Score = 30.8 bits (68), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 91 FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMAK 149
F +FD D +G + EL ++ MG L + + + K T+G I+F+++ A K
Sbjct: 78 FISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRYSTSGK--ITFDDYIACCVK 134
>pdb|2JC2|A Chain A, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|B Chain B, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|C Chain C, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|D Chain D, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
Length = 198
Score = 30.8 bits (68), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 91 FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMAK 149
F + D D +G + EL ++ MG L+ + + + K TNG I+F+++ A K
Sbjct: 109 FISLDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTNGK--ITFDDYIACCVK 165
>pdb|3SIB|A Chain A, Crystal Structure Of Ure3-Binding Protein, Wild-Type
Length = 220
Score = 30.8 bits (68), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%)
Query: 73 LPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADT 132
P ++ L ++ + F DRD +G + EL G L+ + M++ DT
Sbjct: 39 FPLLNTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDT 98
Query: 133 NGDGVISFNEFAAV 146
+ +G ISF EF A+
Sbjct: 99 DFNGHISFYEFMAM 112
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 30.8 bits (68), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 85 EQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFA 144
+++ E F D++ +G+I +L + +G+ KELT M+KEA G ++F F
Sbjct: 23 QEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEA----PGPLNFTMFL 78
Query: 145 AVMA 148
++ +
Sbjct: 79 SIFS 82
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 30.8 bits (68), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 85 EQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFA 144
+++ E F D++ +G+I +L + +G+ KELT M+KEA G ++F F
Sbjct: 23 QEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEA----PGPLNFTMFL 78
Query: 145 AVMA 148
++ +
Sbjct: 79 SIFS 82
>pdb|3SJS|A Chain A, Crystal Structure Of Ure3-Binding Protein From Entamoeba
Histolytica, (D127a,N129a) Mutant, Native Form
pdb|3SIA|A Chain A, Crystal Structure Of Ure3-Binding Protein, (D127a,N129a)
Mutant, Iodide Phased
Length = 220
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%)
Query: 73 LPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADT 132
P ++ L ++ + F DRD +G + EL G L+ + M++ DT
Sbjct: 39 FPLLNTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDT 98
Query: 133 NGDGVISFNEFAAV 146
+ +G ISF EF A+
Sbjct: 99 DFNGHISFYEFMAM 112
>pdb|2VRG|A Chain A, Structure Of Human Mcfd2
Length = 124
Score = 30.4 bits (67), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 12/76 (15%)
Query: 84 QEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQ-------PL-TYKELTEMI----KEAD 131
QE L F+ D DGN + EL+ ++ + + PL + EL +I ++ D
Sbjct: 48 QELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDD 107
Query: 132 TNGDGVISFNEFAAVM 147
N DG I + EFA +
Sbjct: 108 KNNDGYIDYAEFAKSL 123
>pdb|3A4U|B Chain B, Crystal Structure Of Mcfd2 In Complex With Carbohydrate
Recognition Domain Of Ergic-53
Length = 143
Score = 30.4 bits (67), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 12/76 (15%)
Query: 84 QEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQ-------PL-TYKELTEMI----KEAD 131
QE L F+ D DGN + EL+ ++ + + PL + EL +I ++ D
Sbjct: 67 QELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDD 126
Query: 132 TNGDGVISFNEFAAVM 147
N DG I + EFA +
Sbjct: 127 KNNDGYIDYAEFAKSL 142
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 30.4 bits (67), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 9/69 (13%)
Query: 91 FRAFDRDGNGYITA---AELAGSMAKMGQ--PLTYKELTEMI----KEADTNGDGVISFN 141
FR FD D +G + + L + G+ L+ E+ ++I +E+D + DG I+ +
Sbjct: 135 FRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLS 194
Query: 142 EFAAVMAKS 150
EF V+++S
Sbjct: 195 EFQHVISRS 203
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 30.4 bits (67), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 14/79 (17%)
Query: 84 QEQLLEIFRAFDRDGNGYITAAELAGSMAK----MGQPLTYKELTE---------MIKEA 130
E+L F +D + +GYIT E+ M MG+ TY L E ++
Sbjct: 8 HEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRH-TYPILREDAPAEHVERFFEKM 66
Query: 131 DTNGDGVISFNEFAAVMAK 149
D N DGV++ EF K
Sbjct: 67 DRNQDGVVTIEEFLEACQK 85
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 30.0 bits (66), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 9/69 (13%)
Query: 91 FRAFDRDGNGYITA---AELAGSMAKMGQ--PLTYKELTEMI----KEADTNGDGVISFN 141
FR FD D +G + + L + G+ L+ E+ ++I +E+D + DG I+ +
Sbjct: 104 FRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLS 163
Query: 142 EFAAVMAKS 150
EF V+++S
Sbjct: 164 EFQHVISRS 172
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 30.0 bits (66), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 13/60 (21%), Positives = 31/60 (51%)
Query: 90 IFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMAK 149
+F FD++ +G ++ E T +++ + +E D +G+G ++ +EF + + K
Sbjct: 6 VFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65
>pdb|3AKA|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 30.0 bits (66), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 16/103 (15%)
Query: 56 DANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAF--------DRDGNGYITAAEL 107
D +G+ + +E V + + + ++ EI R F D DG+G +T A+
Sbjct: 65 DRDGDQRITREEFVTGAVKRLRD----KPDRFAEIARPFLHAALGVADTDGDGAVTVADT 120
Query: 108 AGSMAKMGQPLTYKELTEMIKEA-DTNGDGVISFNEFAAVMAK 149
A ++ G P ++L A DT+GDG + E A+
Sbjct: 121 ARALTAFGVP---EDLARQAAAALDTDGDGKVGETEIVPAFAR 160
>pdb|1C07|A Chain A, Structure Of The Third Eps15 Homology Domain Of Human
Eps15
Length = 95
Score = 30.0 bits (66), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 89 EIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFA 144
EIF D+D +G+++ E+ K G P T L + DT G +S ++FA
Sbjct: 14 EIFLKTDKDMDGFVSGLEVREIFLKTGLPSTL--LAHIWSLCDTKDCGKLSKDQFA 67
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 30.0 bits (66), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 56 DANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYI 102
D N G++++ EL A+ + + ++LE+ +DR+GNGYI
Sbjct: 17 DTNKTGSIDYHELKVAMRA---LGFDVKKPEILELMNEYDREGNGYI 60
>pdb|1CB1|A Chain A, Three-Dimensional Solution Structure Of Ca2+-Loaded
Porcine Calbindin D9k Determined By Nuclear Magnetic
Resonance Spectroscopy
Length = 78
Score = 30.0 bits (66), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 123 LTEMIKEADTNGDGVISFNEFAAVMAK 149
L ++ +E D NGDG +SF EF ++ K
Sbjct: 49 LDDLFQELDKNGDGEVSFEEFQVLVKK 75
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 29.6 bits (65), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
Query: 68 LVNAILPDMDETILINQEQLLEIFRAFDRDG-NGYITAAELAGSMAKM---GQPLTYKEL 123
L IL ++ ++E+L +++F +D G IT + AK P Y +
Sbjct: 16 LSKEILEELQLNTKFSEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQ- 74
Query: 124 TEMIKEADTNGDGVISFNEFAAVMAKST 151
+ + D+N DG + F E+ + +T
Sbjct: 75 -HVFRSFDSNLDGTLDFKEYVIALHXTT 101
Score = 26.6 bits (57), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 5/84 (5%)
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
+F + PD D +FR+FD + +G + E ++ T ++L
Sbjct: 55 QFQSIYAKFFPDTDPKAYAQH-----VFRSFDSNLDGTLDFKEYVIALHXTTAGKTNQKL 109
Query: 124 TEMIKEADTNGDGVISFNEFAAVM 147
D +G+G IS NE ++
Sbjct: 110 EWAFSLYDVDGNGTISKNEVLEIV 133
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 29.6 bits (65), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 83 NQEQLLEIFRAFDRDGNGYITAAELA---GSMAKMGQPLTYKELTEMIKEADTNGDGVIS 139
+ + + + F D+D +G+I EL + + LT E +K D++GDG I
Sbjct: 40 SADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIG 99
Query: 140 FNEFAAVM 147
+EF A++
Sbjct: 100 VDEFTALV 107
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 29.6 bits (65), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 29/58 (50%)
Query: 90 IFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVM 147
+F FD D NGYI E +++ + +L + D + +G+IS++E ++
Sbjct: 68 VFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIV 125
>pdb|1ZX4|A Chain A, Structure Of Parb Bound To Dna
pdb|1ZX4|B Chain B, Structure Of Parb Bound To Dna
Length = 192
Score = 29.3 bits (64), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 49 HVLLANMDANGNGAVEFDELVNAILPDMDETILINQ 84
L A D GN +EFD+L+ I P++++ + IN+
Sbjct: 70 KTLCAVGDEXGNKNLEFDQLIQNISPEINDILSINE 105
>pdb|1PON|B Chain B, Site Iii-Site Iv Troponin C Heterodimer, Nmr
Length = 36
Score = 29.3 bits (64), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 22/30 (73%)
Query: 118 LTYKELTEMIKEADTNGDGVISFNEFAAVM 147
+T +++ +++K++D N DG I F+EF +M
Sbjct: 2 VTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 31
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 86 QLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEF 143
Q L ++ D D +GY++ E + +G LT + D N +G IS +EF
Sbjct: 103 QSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEF 160
>pdb|1J7Q|A Chain A, Solution Structure And Backbone Dynamics Of The Defunct
Ef- Hand Domain Of Calcium Vector Protein
pdb|1J7R|A Chain A, Solution Structure And Backbone Dynamics Of The Defunct
Ef- Hand Domain Of Calcium Vector Protein
Length = 86
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 26/47 (55%)
Query: 84 QEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEA 130
+++ ++IF FDR+ ++ + K+GQ T +E ++KEA
Sbjct: 13 KDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEA 59
>pdb|1MR8|A Chain A, Migration Inhibitory Factor-Related Protein 8 From Human
pdb|1MR8|B Chain B, Migration Inhibitory Factor-Related Protein 8 From Human
Length = 93
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 7/59 (11%)
Query: 91 FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMAK 149
F A RD + E + K G + +KEL D N DG ++F EF ++ K
Sbjct: 26 FHAVYRDDLKKLLETECPQYIRKKGADVWFKEL-------DINTDGAVNFQEFLILVIK 77
>pdb|2AUC|A Chain A, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|B Chain B, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|C Chain C, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
Length = 126
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 83 NQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKE 122
N E+L++ F FD + +G++T + + G LT +E
Sbjct: 63 NXEELIKXFSHFDNNSSGFLTKNQXKNILTTWGDALTEQE 102
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 46/126 (36%), Gaps = 12/126 (9%)
Query: 8 QLNQLRDIFARFDMDSDXXXXXXXXXXXXXXXXXKPSGDQIHVLLANMDANGNGA---VE 64
Q+ +L++ F D D D P D+++ +L N
Sbjct: 14 QMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKECPGQLNFTAFLTL 73
Query: 65 FDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELT 124
F E V+ P ++ L F FD DG G+I L + MG + +E+
Sbjct: 74 FGEKVSGTDP---------EDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIK 124
Query: 125 EMIKEA 130
+ K+A
Sbjct: 125 NVWKDA 130
>pdb|1K2H|A Chain A, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1K2H|B Chain B, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1ZFS|A Chain A, Solution Structure Of S100a1 Bound To Calcium
pdb|1ZFS|B Chain B, Solution Structure Of S100a1 Bound To Calcium
pdb|2K2F|A Chain A, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2K2F|B Chain B, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2KBM|A Chain A, Ca-S100a1 Interacting With Trtk12
pdb|2KBM|B Chain B, Ca-S100a1 Interacting With Trtk12
Length = 93
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 125 EMIKEADTNGDGVISFNEFAAVMAKSTL 152
+++KE D NGDG + F EF ++A T+
Sbjct: 56 KIMKELDENGDGEVDFQEFVVLVAALTV 83
>pdb|3AKB|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 16/103 (15%)
Query: 56 DANGNGAVEFDELVNAILPDMDETILINQEQLLEIFRAF--------DRDGNGYITAAEL 107
D +G+ + +E V + + + ++ E+ R F D DG+G +T A+
Sbjct: 65 DRDGDQRITREEFVTGAVKRLRD----KPDRFAEMARPFLHAALGVADTDGDGAVTVADT 120
Query: 108 AGSMAKMGQPLTYKELTEMIKEA-DTNGDGVISFNEFAAVMAK 149
A ++ G P ++L A DT+GDG + E A+
Sbjct: 121 ARALTAFGVP---EDLARQAAAALDTDGDGKVGETEIVPAFAR 160
Score = 26.2 bits (56), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 84 QEQLLEIFRAFDRDGNGYITAAELAGSMAKM 114
+ ++ F FD+DGNG+I ++ +G+ M
Sbjct: 3 ERRIAARFTTFDQDGNGHIDRSDFSGAAKAM 33
>pdb|2HPS|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri
Length = 186
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 26/58 (44%)
Query: 86 QLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEF 143
Q L + D D +GY++ E + +G LT + D N +G IS +EF
Sbjct: 103 QSLIXYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEF 160
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
EF + + P+ D +FR+FD + +G + E ++ T ++L
Sbjct: 47 EFQTIYSKFFPEADPKAYAQH-----VFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKL 101
Query: 124 TEMIKEADTNGDGVISFNEFAAVMA 148
D +G+G IS NE ++
Sbjct: 102 EWAFSLYDVDGNGTISKNEVLEIVT 126
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
EF + + P+ D +FR+FD + +G + E ++ T ++L
Sbjct: 48 EFQTIYSKFFPEADPKAYAQH-----VFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKL 102
Query: 124 TEMIKEADTNGDGVISFNEFAAVMA 148
D +G+G IS NE ++
Sbjct: 103 EWAFSLYDVDGNGTISKNEVLEIVT 127
>pdb|1D1O|A Chain A, Cooperativity In Ef-Hand Ca2+-Binding Proteins: Evidence
Of Site-Site Communication From Binding-Induced Changes
In Structure And Dynamics Of N56a Calbindin D9k
Length = 75
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 123 LTEMIKEADTNGDGVISFNEFAAVMAK 149
L E+ +E D GDG +SF EF ++ K
Sbjct: 46 LDELFEELDKAGDGEVSFEEFQVLVKK 72
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
EF + + P+ D +FR+FD + +G + E ++ T ++L
Sbjct: 47 EFQTIYSKFFPEADPKAYAQH-----VFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKL 101
Query: 124 TEMIKEADTNGDGVISFNEFAAVMA 148
D +G+G IS NE ++
Sbjct: 102 EWAFSLYDVDGNGTISKNEVLEIVT 126
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
EF + + P+ D +FR+FD + +G + E ++ T ++L
Sbjct: 47 EFQTIYSKFFPEADPKAYAQH-----VFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKL 101
Query: 124 TEMIKEADTNGDGVISFNEFAAVMA 148
D +G+G IS NE ++
Sbjct: 102 EWAFSLYDVDGNGTISKNEVLEIVT 126
>pdb|3STH|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Toxoplasma Gondii
pdb|3STH|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Toxoplasma Gondii
pdb|3STH|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Toxoplasma Gondii
pdb|3STH|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Toxoplasma Gondii
Length = 361
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 112 AKMGQPLTYKELTEMIKEADTNG--DGVISFNE 142
K+ +P Y+++ +KEA T+G G+IS+ +
Sbjct: 270 CKLAKPAKYEDIVAAVKEAATSGPMKGIISYTD 302
>pdb|1FI6|A Chain A, Solution Structure Of The Reps1 Eh Domain
Length = 92
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 91 FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVM 147
F+ D NG+I + K P+ EL+ + + +D + DG ++ +EF A
Sbjct: 15 FKTIQPDLNGFIPGSAAKEFFTKSKLPIL--ELSHIWELSDFDKDGALTLDEFCAAF 69
>pdb|2BCF|A Chain A, Crystal Structure Of A Evolved Putative Penicillin-Binding
Protein Homolog, Rv2911, From Mycobacterium Tuberculosis
Length = 276
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 70 NAILPDMD-ETILINQEQLLEIFRAFDRDGNGYITAAE--LAGSMAKMGQPLTYKELTEM 126
+A P D E +++NQ++LL+ + GY AA G+ A+ G+ L +
Sbjct: 178 SAXFPSDDGEQLIVNQDELLQRYPGAIGGKTGYTNAARKTFVGAAARGGRRLVIAXXYGL 237
Query: 127 IKE 129
+KE
Sbjct: 238 VKE 240
>pdb|2LHL|A Chain A, Chemical Shift Assignments And Solution Structure Of Human
Apo-S100a1 E32q Mutant
pdb|2LHL|B Chain B, Chemical Shift Assignments And Solution Structure Of Human
Apo-S100a1 E32q Mutant
Length = 93
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 125 EMIKEADTNGDGVISFNEFAAVMAKSTL 152
+++KE D NGDG + F E+ ++A T+
Sbjct: 56 KVMKELDENGDGEVDFQEYVVLVAALTV 83
>pdb|1XK4|A Chain A, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|B Chain B, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|E Chain E, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|F Chain F, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|I Chain I, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|J Chain J, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|4GGF|A Chain A, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|K Chain K, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|S Chain S, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|U Chain U, Crystal Structure Of Mn2+ Bound Calprotectin
Length = 93
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 7/59 (11%)
Query: 91 FRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEADTNGDGVISFNEFAAVMAK 149
F A RD + E + K G + +KEL D N DG ++F EF ++ K
Sbjct: 26 FHAVYRDDLKKLLETESPQYIRKKGADVWFKEL-------DINTDGAVNFQEFLILVIK 77
>pdb|2L0P|A Chain A, Solution Structure Of Human Apo-S100a1 Protein By Nmr
Spectroscopy
pdb|2L0P|B Chain B, Solution Structure Of Human Apo-S100a1 Protein By Nmr
Spectroscopy
Length = 94
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 125 EMIKEADTNGDGVISFNEFAAVMAKSTL 152
+++KE D NGDG + F E+ ++A T+
Sbjct: 57 KVMKELDENGDGEVDFQEYVVLVAALTV 84
>pdb|2LLS|A Chain A, Solution Structure Of Human Apo-S100a1 C85m
pdb|2LLS|B Chain B, Solution Structure Of Human Apo-S100a1 C85m
Length = 93
Score = 27.7 bits (60), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 125 EMIKEADTNGDGVISFNEFAAVMAKSTL 152
+++KE D NGDG + F E+ ++A T+
Sbjct: 56 KVMKELDENGDGEVDFQEYVVLVAALTV 83
>pdb|2LLU|A Chain A, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
pdb|2LLU|B Chain B, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
pdb|2LP2|A Chain A, Solution Structure And Dynamics Of Human S100a1 Protein
Modified At Cysteine 85 With Homocysteine Disulfide Bond
Formation In Calcium Saturated Form
pdb|2LP2|B Chain B, Solution Structure And Dynamics Of Human S100a1 Protein
Modified At Cysteine 85 With Homocysteine Disulfide Bond
Formation In Calcium Saturated Form
pdb|2LP3|A Chain A, Solution Structure Of S100a1 Ca2+
pdb|2LP3|B Chain B, Solution Structure Of S100a1 Ca2+
Length = 93
Score = 27.3 bits (59), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 125 EMIKEADTNGDGVISFNEFAAVMAKSTL 152
+++KE D NGDG + F E+ ++A T+
Sbjct: 56 KVMKELDENGDGEVDFQEYVVLVAALTV 83
>pdb|2LLT|A Chain A, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
pdb|2LLT|B Chain B, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
Length = 93
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 125 EMIKEADTNGDGVISFNEFAAVMAKSTL 152
+++KE D NGDG + F E+ ++A T+
Sbjct: 56 KVMKELDENGDGEVDFQEYVVLVAALTV 83
>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
pdb|3PGX|B Chain B, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
pdb|3PGX|C Chain C, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
pdb|3PGX|D Chain D, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
Length = 280
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 10/61 (16%)
Query: 64 EFDELVNAILPDMDETILINQEQLLEI----------FRAFDRDGNGYITAAELAGSMAK 113
E+ VN+I P ET +I E ++EI F NG++TA E+A +A
Sbjct: 198 EYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNGFMTADEVADVVAW 257
Query: 114 M 114
+
Sbjct: 258 L 258
>pdb|1RP3|A Chain A, Cocrystal Structure Of The Flagellar SigmaANTI-Sigma
Complex, Sigma-28FLGM
pdb|1RP3|C Chain C, Cocrystal Structure Of The Flagellar SigmaANTI-Sigma
Complex, Sigma-28FLGM
pdb|1RP3|E Chain E, Cocrystal Structure Of The Flagellar SigmaANTI-Sigma
Complex, Sigma-28FLGM
pdb|1RP3|G Chain G, Cocrystal Structure Of The Flagellar SigmaANTI-Sigma
Complex, Sigma-28FLGM
pdb|1SC5|A Chain A, Sigma-28(Flia)FLGM COMPLEX
Length = 239
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 6/44 (13%)
Query: 87 LLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEMIKEA 130
L E+FR F RD +EL S + + + +ELTE +KEA
Sbjct: 147 LEEVFRDFARD------YSELIPSSTNVEEEVIKRELTEKVKEA 184
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 89 EIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKELTEM 126
+ F FDR G G I + + GQ T E+TE+
Sbjct: 9 QAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEI 46
>pdb|3H4S|E Chain E, Structure Of The Complex Of A Mitotic Kinesin With Its
Calcium Binding Regulator
Length = 135
Score = 26.9 bits (58), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 126 MIKEADTNGDGVISFNEFAAVMAK 149
M++E D +GDG ++ EF +M +
Sbjct: 82 MVREGDLDGDGALNQTEFCVLMVR 105
>pdb|3AI5|A Chain A, Crystal Structure Of Yeast Enhanced Green Fluorescent
Protein- Ubiquitin Fusion Protein
Length = 307
Score = 26.9 bits (58), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 60 NGAVEFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNG---------YITAAELAGS 110
+G+V+ + P D +L+ L A +D N ++TAA + GS
Sbjct: 174 DGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLEFVTAAGITGS 233
Query: 111 MAKMGQPLTYKELTEMIKEADT 132
M + LT K +T ++ +DT
Sbjct: 234 MQIFVKTLTGKTITLEVEPSDT 255
>pdb|2NTZ|A Chain A, Structure Of A Parb-Dna Complex Reveals A Double B-Box
Interaction
pdb|2NTZ|B Chain B, Structure Of A Parb-Dna Complex Reveals A Double B-Box
Interaction
Length = 192
Score = 26.9 bits (58), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 49 HVLLANMDANGNGAVEFDELVNAILPDMDETILINQ 84
L A D GN +EFD+L+ I P++++ + I +
Sbjct: 70 KTLCAVGDEXGNKNLEFDQLIQNISPEINDILSIEE 105
>pdb|3RLZ|A Chain A, 2.0 Angstrom X-Ray Structure Of Bovine Ca(2+)-S100b D63n
pdb|3RLZ|B Chain B, 2.0 Angstrom X-Ray Structure Of Bovine Ca(2+)-S100b D63n
pdb|3RM1|A Chain A, 1.24 Angstrom X-Ray Structure Of Bovine
Trtk12-Ca(2+)-S100b D63n
Length = 92
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 87 LLEIFRAFD-RDGNGY-ITAAELA----GSMAKMGQPLTYKELTEMIKEA-DTNGDGVIS 139
L+++F + R+G+ + + +EL ++ + + +E+ + + E D+NGDG
Sbjct: 11 LIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECD 70
Query: 140 FNEFAAVMAKST 151
F EF A +A T
Sbjct: 71 FQEFMAFVAMIT 82
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 26.9 bits (58), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
EF + + P+ D +FR+FD + +G + + ++ T ++L
Sbjct: 47 EFQTIYSKFFPEADPKAYAQH-----VFRSFDANSDGTLDFKQYVIALHMTSAGKTNQKL 101
Query: 124 TEMIKEADTNGDGVISFNEFAAVMA 148
D +G+G IS NE ++
Sbjct: 102 EWAFSLYDVDGNGTISKNEVLEIVT 126
>pdb|2JMM|A Chain A, Nmr Solution Structure Of A Minimal Transmembrane Beta-
Barrel Platform Protein
Length = 156
Score = 26.9 bits (58), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 12/19 (63%), Positives = 16/19 (84%), Gaps = 2/19 (10%)
Query: 90 IFRA--FDRDGNGYITAAE 106
++RA D+DGNGYI+AAE
Sbjct: 83 VWRADTSDKDGNGYISAAE 101
>pdb|1PON|A Chain A, Site Iii-Site Iv Troponin C Heterodimer, Nmr
pdb|1CTA|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTA|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
Length = 36
Score = 26.9 bits (58), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 83 NQEQLLEIFRAFDRDGNGYITAAELAGSMAKMG 115
++E+L FR FD++ +GYI EL + G
Sbjct: 3 SEEELANAFRIFDKNADGYIDIEELGEILRATG 35
>pdb|4GGF|C Chain C, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|L Chain L, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|T Chain T, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|V Chain V, Crystal Structure Of Mn2+ Bound Calprotectin
Length = 114
Score = 26.9 bits (58), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 121 KELTEMIKEADTNGDGVISFNEFAAVMAKSTL 152
K + ++++ DTN D +SF EF +MA+ T
Sbjct: 57 KVIEHIMEDLDTNADKQLSFEEFIMLMARLTW 88
>pdb|1IRJ|A Chain A, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|B Chain B, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|C Chain C, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|D Chain D, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|E Chain E, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|F Chain F, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|G Chain G, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|H Chain H, Crystal Structure Of The Mrp14 Complexed With Chaps
Length = 113
Score = 26.9 bits (58), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 121 KELTEMIKEADTNGDGVISFNEFAAVMAKSTL 152
K + ++++ DTN D +SF EF +MA+ T
Sbjct: 56 KVIEHIMEDLDTNADKQLSFEEFIMLMARLTW 87
>pdb|1XK4|C Chain C, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|D Chain D, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|G Chain G, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|H Chain H, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|K Chain K, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|L Chain L, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
Length = 113
Score = 26.9 bits (58), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 121 KELTEMIKEADTNGDGVISFNEFAAVMAKSTL 152
K + ++++ DTN D +SF EF +MA+ T
Sbjct: 56 KVIEHIMEDLDTNADKQLSFEEFIMLMARLTW 87
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 26.9 bits (58), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Query: 64 EFDELVNAILPDMDETILINQEQLLEIFRAFDRDGNGYITAAELAGSMAKMGQPLTYKEL 123
EF + + P+ D +FR+FD + +G + + ++ T ++L
Sbjct: 47 EFQTIYSKFFPEADPKAYAQH-----VFRSFDANSDGTLDFKQYVIALHMTSAGKTNQKL 101
Query: 124 TEMIKEADTNGDGVISFNEFAAVMA 148
D +G+G IS NE ++
Sbjct: 102 EWAFSLYDVDGNGTISKNEVLEIVT 126
>pdb|2QLT|A Chain A, Crystal Structure Of An Isoform Of
Dl-Glycerol-3-Phosphatase, Rhr2p, From Saccharomyces
Cerevisiae
Length = 275
Score = 26.6 bits (57), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 69 VNAILPDMDETILINQEQLLEIFRAFDRD 97
+NA L D+D TI+I+Q + +R F +D
Sbjct: 35 INAALFDVDGTIIISQPAIAAFWRDFGKD 63
>pdb|1KBH|A Chain A, Mutual Synergistic Folding In The Interaction Between
Nuclear Receptor Coactivators Cbp And Actr
Length = 47
Score = 26.2 bits (56), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 11/45 (24%)
Query: 46 DQIHVLLANMDANGNGAVEFDELVNAI-LPDMDETILINQEQLLE 89
DQ+H LL+N DA G +E+ A+ +P+ L+NQ Q LE
Sbjct: 11 DQLHTLLSNTDATG-----LEEIDRALGIPE-----LVNQGQALE 45
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.138 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,198,580
Number of Sequences: 62578
Number of extensions: 152253
Number of successful extensions: 1379
Number of sequences better than 100.0: 331
Number of HSP's better than 100.0 without gapping: 296
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 467
Number of HSP's gapped (non-prelim): 617
length of query: 160
length of database: 14,973,337
effective HSP length: 91
effective length of query: 69
effective length of database: 9,278,739
effective search space: 640232991
effective search space used: 640232991
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.7 bits)