BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>042616
MSSWSSENATKAYLQALKMGKRGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALV
AAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFVLIDC
NIDIDGHKNVFRAAKESVMHGSGAGVIVGYNALPKGSWRGYKTHFLPIGEGLLVTRIGEN
SDVGGGRKRSRWVVTVDKCTGEEHVFRVTSSSSPRKVIEA

High Scoring Gene Products

Symbol, full name Information P value
AT5G62280 protein from Arabidopsis thaliana 8.9e-38
AT2G45360 protein from Arabidopsis thaliana 6.3e-21
AT1G12320 protein from Arabidopsis thaliana 1.2e-17
AT3G60780 protein from Arabidopsis thaliana 3.2e-17
AT1G62840 protein from Arabidopsis thaliana 1.3e-13

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  042616
        (220 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2167913 - symbol:AT5G62280 "AT5G62280" species...   405  8.9e-38   1
TAIR|locus:2050842 - symbol:AT2G45360 "AT2G45360" species...   246  6.3e-21   1
TAIR|locus:2034645 - symbol:AT1G12320 "AT1G12320" species...   215  1.2e-17   1
TAIR|locus:2101911 - symbol:AT3G60780 "AT3G60780" species...   211  3.2e-17   1
TAIR|locus:2026202 - symbol:AT1G62840 "AT1G62840" species...   177  1.3e-13   1


>TAIR|locus:2167913 [details] [associations]
            symbol:AT5G62280 "AT5G62280" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB019235
            InterPro:IPR009902 Pfam:PF07279 EMBL:BT010755 EMBL:BT011787
            EMBL:AK228759 IPI:IPI00539824 RefSeq:NP_201034.1 UniGene:At.24047
            ProteinModelPortal:Q9LVA8 STRING:Q9LVA8 EnsemblPlants:AT5G62280.1
            GeneID:836349 KEGG:ath:AT5G62280 TAIR:At5g62280 eggNOG:NOG325450
            HOGENOM:HOG000006158 InParanoid:Q9LVA8 OMA:LEPSEIH PhylomeDB:Q9LVA8
            ProtClustDB:CLSN2687328 Genevestigator:Q9LVA8 Uniprot:Q9LVA8
        Length = 236

 Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
 Identities = 96/193 (49%), Positives = 130/193 (67%)

Query:     1 MSSWSSENATKAYLQALKMGKRGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTL-AL 59
             M+ WS+ENATKAYL  LK  +R KEP+V EFISALAAGN+A+ I +AC+  A +  L AL
Sbjct:     1 MAFWSAENATKAYLSTLKTDQRTKEPNVAEFISALAAGNSARKIAVACAGAANADILVAL 60

Query:    60 VAAARQTGGRVVCILSGVIGDIDASKKSLG-RYANCIEFVKGDAQK-LLMGDYRG-ADFV 116
             +AAA QT G+VVC+L G I ++  S+K L     + I+FV G++    L+ ++ G ADFV
Sbjct:    61 IAAANQTRGQVVCVLRG-IEELIISQKMLEPSEIHQIQFVVGESNDDTLINNHFGEADFV 119

Query:   117 LIDCNIDIDGHKNV----FRAAKESVMHGSGAGV--IVGYNALPKGSWR---GYKTHFLP 167
             L+DCN++   H+ +        +E+   G G+GV  +VGYNA  +GSWR   G KT FLP
Sbjct:   120 LVDCNLE--NHQEIVGKILNHHEENARTGGGSGVAVVVGYNAFSRGSWRFSDGRKTQFLP 177

Query:   168 IGEGLLVTRIGEN 180
             IGEGLLVTR+ +N
Sbjct:   178 IGEGLLVTRVNDN 190

 Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
 Identities = 84/203 (41%), Positives = 117/203 (57%)

Query:    36 AAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCI 95
             A  +  ++ V    +      +AL+AAA QT G+VVC+L G+   I + K       + I
Sbjct:    37 AGNSARKIAVACAGAANADILVALIAAANQTRGQVVCVLRGIEELIISQKMLEPSEIHQI 96

Query:    96 EFVKGDAQK-LLMGDYRG-ADFVLIDCNIDIDGHKNV----FRAAKESVMHGSGAGV--I 147
             +FV G++    L+ ++ G ADFVL+DCN++   H+ +        +E+   G G+GV  +
Sbjct:    97 QFVVGESNDDTLINNHFGEADFVLVDCNLE--NHQEIVGKILNHHEENARTGGGSGVAVV 154

Query:   148 VGYNALPKGSWR---GYKTHFLPIGEGLLVTRIGENSDV---GGGR----KRSRWVVTVD 197
             VGYNA  +GSWR   G KT FLPIGEGLLVTR+ +N  +      R    ++SRWVV VD
Sbjct:   155 VGYNAFSRGSWRFSDGRKTQFLPIGEGLLVTRVNDNQKMMMKNHHRDQVMRKSRWVVKVD 214

Query:   198 KCTGEEHVFRVTSSSSPRKVIEA 220
             KCTGEEHVFRV        +IEA
Sbjct:   215 KCTGEEHVFRVRVPRG-EAIIEA 236


>TAIR|locus:2050842 [details] [associations]
            symbol:AT2G45360 "AT2G45360" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC002387
            UniGene:At.28771 UniGene:At.36643 EMBL:BT005233 EMBL:AK118397
            IPI:IPI00536683 PIR:F84889 RefSeq:NP_182061.1
            ProteinModelPortal:O22136 IntAct:O22136 EnsemblPlants:AT2G45360.1
            GeneID:819144 KEGG:ath:AT2G45360 TAIR:At2g45360 eggNOG:NOG250381
            HOGENOM:HOG000239049 InParanoid:O22136 OMA:ENTMEEF PhylomeDB:O22136
            ProtClustDB:CLSN2683346 Genevestigator:O22136 InterPro:IPR009902
            Pfam:PF07279 Uniprot:O22136
        Length = 215

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 71/217 (32%), Positives = 107/217 (49%)

Query:     4 WSSENATKAYLQALKMGKRGKEPDVGEFISALAAGNNAQLIVMACS-SIAVSRTLALVAA 62
             WS E A+ AY+  +K  K  KE  V EF+SA AAG NA+LIV   S    ++ ++ L  A
Sbjct:     5 WSPETASDAYIDTVKSCKSDKESGVAEFLSATAAGWNARLIVETWSRGDPITTSVGLAVA 64

Query:    63 ARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFVLIDCNI 122
             A  TGGR VCI+      ++      G +      V G++ +  M ++ G DF+++D   
Sbjct:    65 ATHTGGRHVCIVPDEQSKLEYVLAMRG-FVTTEVVVVGESVENTMEEFPGVDFLVVDSK- 122

Query:   123 DIDGHKNVFRAAKESVMHGSGAGVIVGYNALPKG----SW-----RG---YKTHFLPIGE 170
                  +   R  + + +   GA V+V  NA+ +      W     RG    ++ FLP+G 
Sbjct:   123 ----RREFVRTLRFAKLSNKGA-VLVCKNAMHRAISGFKWHDVLKRGTRVVRSVFLPVGS 177

Query:   171 GLLVTRIGENSDVGGGRKRSRWVVTVDKCTGEEHVFR 207
             GL +  +G          RSRW+  VD  +GEEH+FR
Sbjct:   178 GLDIVHVGATGRGDSRNLRSRWIRHVDHLSGEEHLFR 214


>TAIR|locus:2034645 [details] [associations]
            symbol:AT1G12320 "AT1G12320" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002684
            GenomeReviews:CT485782_GR EMBL:AC025416 HOGENOM:HOG000239049
            InterPro:IPR009902 Pfam:PF07279 EMBL:AY063798 EMBL:AY117198
            IPI:IPI00545118 RefSeq:NP_172696.1 UniGene:At.27196
            ProteinModelPortal:Q9LNB3 DNASU:837786 EnsemblPlants:AT1G12320.1
            GeneID:837786 KEGG:ath:AT1G12320 TAIR:At1g12320 eggNOG:NOG321787
            InParanoid:Q9LNB3 OMA:ANAKHIC PhylomeDB:Q9LNB3
            ProtClustDB:CLSN2682254 ArrayExpress:Q9LNB3 Genevestigator:Q9LNB3
            Uniprot:Q9LNB3
        Length = 212

 Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
 Identities = 63/215 (29%), Positives = 108/215 (50%)

Query:     4 WSSENATKAYLQALKMGKRGKEPDVGEFISALAAGNNAQLIVMACSS-IAVSRTLALVAA 62
             WS E A+KAY+  +K  +  + PD  E I+A+AAG N +LIV   S   A++ ++ L  A
Sbjct:     5 WSPETASKAYIDTVKSCENLETPDAAELIAAMAAGWNVKLIVETWSEGDAIASSIGLNVA 64

Query:    63 ARQTGGRVVCILSGVIGD---IDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFVLID 119
             ++    + +CI+     +   + A ++S     N  E +  +     M   +G DF+++D
Sbjct:    65 SKHANAKHICIVQNSRSESAYLQAIQESSSPL-NFPETIVAEEPGKAMKKLQGVDFLVVD 123

Query:   120 CNIDIDGHKNVFRAAKESVMHGSGAGVIV---GYNALPK--GSWRGYKTHFLPIGEGLLV 174
                    +K    AA ++   G+   V+V   GY++L +     +  +T  LP+  G+ +
Sbjct:   124 WR-----NKEFAAAALKNAAFGNRGAVVVCRNGYSSLRRVLRDRKVVRTVTLPVTGGIEI 178

Query:   175 TRIG-ENSDVGGGRKRSRWVVTVDKCTGEEHVFRV 208
               +   NS   G  KR RW+  VD+ +GEEHVF +
Sbjct:   179 AHVAARNSGKSGNNKR-RWITHVDQRSGEEHVFSI 212


>TAIR|locus:2101911 [details] [associations]
            symbol:AT3G60780 "AT3G60780" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002686 EMBL:AL162295
            ProtClustDB:CLSN2683346 InterPro:IPR009902 Pfam:PF07279
            EMBL:AY086651 EMBL:DQ446780 IPI:IPI00548484 PIR:T47889
            RefSeq:NP_191637.1 UniGene:At.34383 ProteinModelPortal:Q9LZY5
            PRIDE:Q9LZY5 EnsemblPlants:AT3G60780.1 GeneID:825249
            KEGG:ath:AT3G60780 TAIR:At3g60780 InParanoid:Q9LZY5 OMA:CIVPDEE
            PhylomeDB:Q9LZY5 Genevestigator:Q9LZY5 Uniprot:Q9LZY5
        Length = 218

 Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
 Identities = 70/221 (31%), Positives = 109/221 (49%)

Query:     4 WSSENATKAYLQALKMGKRGKEPDVGEFISALAAGNNAQLIVMACS-SIAVSRTLALVAA 62
             WS E A+ AY+  ++  K  ++  V EF+SA AAG N +LIV   S    ++ ++ L  A
Sbjct:     5 WSPETASNAYIHTVRSCKSYRDSSVAEFLSATAAGWNTRLIVETWSRGDPIATSVGLAVA 64

Query:    63 ARQTGGRVVCILSGVIGDIDASKKSLGRY-ANCIEFVKGDAQKLLMGDYRGADFVLIDCN 121
             A  T GR VCI+       +      G   ++  E +  D+ + ++    G DF+++D  
Sbjct:    65 AIHTCGRHVCIVPDEESRSEYEAVMRGAVTSDSTEVMVLDSAEDVVERISGVDFMVVDSK 124

Query:   122 IDIDGHK--NVFRAAKESVMHGSGAGVIVGYNA----LPKGSWRGY--------KTHFLP 167
                  H+  N    AK S M   GA V+V  NA    +P   W+G         ++ FLP
Sbjct:   125 ----RHEFVNALGLAKTSKM---GA-VLVCKNATLKSIPGFKWQGLLRRGTRVVRSVFLP 176

Query:   168 IGEGLLVTRIGENSDVGGGRK-RSRWVVTVDKCTGEEHVFR 207
             +G GL +  +G +    G RK  SRW+  +D  +GEEH+F+
Sbjct:   177 VGRGLEIVHVGASGGGNGLRKIPSRWIKHIDPRSGEEHLFK 217


>TAIR|locus:2026202 [details] [associations]
            symbol:AT1G62840 "AT1G62840" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 EMBL:AC007190 InterPro:IPR009902
            Pfam:PF07279 UniGene:At.36213 UniGene:At.36215
            ProtClustDB:CLSN2682254 EMBL:BT010897 EMBL:AK175387 EMBL:AK176638
            IPI:IPI00542008 PIR:A96653 RefSeq:NP_176472.1
            ProteinModelPortal:Q9SI67 DNASU:842584 EnsemblPlants:AT1G62840.1
            GeneID:842584 KEGG:ath:AT1G62840 TAIR:At1g62840 InParanoid:Q9SI67
            OMA:NGRHICI PhylomeDB:Q9SI67 Genevestigator:Q9SI67 Uniprot:Q9SI67
        Length = 224

 Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 68/226 (30%), Positives = 105/226 (46%)

Query:     4 WSSENATKAYLQALKMGKRGKEPDVGEFISALAAGNNAQLIVMACS---SIAVSRTLALV 60
             WS E A+KAY+  +K  +    P   E ++A+AAG NA LIV   S   +IA+S  + L 
Sbjct:     5 WSPETASKAYIDTVKSCENLGTPGAAELVAAMAAGWNANLIVETWSEGETIAIS--VGLN 62

Query:    61 AAARQTGGRVVCILSGVIGD---IDA-SKKSLGRYANCIEF-VKGDAQKLLMGDYRGADF 115
              A+R T GR +CI+         + A +++S       I    +G+  +  M   +G DF
Sbjct:    63 IASRHTNGRHICIVPNARSQTAYLQAMAEQSCSNLPETIIMNEEGEELEHTMQTLQGIDF 122

Query:   116 VLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIV---GYNALPKG-SW-RGY------KTH 164
             +++D +   D   NV R A    + GS   V+V   GY       SW + +      +T 
Sbjct:   123 LVVDWD-QKDFAANVLRNA----VFGSRGAVVVCRSGYRRSTSCFSWTKAFSDRNVVRTV 177

Query:   165 FLPIGEGLLVTRIGENSDVGGGRKRS---RWVVTVDKCTGEEHVFR 207
              LP+  GL +  +      G     S   +W+   D+ +GEEHV R
Sbjct:   178 TLPVSGGLEIAHVAAARSSGKSDNNSNKRKWIKHFDQRSGEEHVIR 223


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.134   0.395    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      220       220   0.00094  112 3  11 22  0.39    33
                                                     32  0.40    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  608 (65 KB)
  Total size of DFA:  177 KB (2102 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.24u 0.10s 17.34t   Elapsed:  00:00:02
  Total cpu time:  17.24u 0.10s 17.34t   Elapsed:  00:00:02
  Start:  Tue May 21 01:25:52 2013   End:  Tue May 21 01:25:54 2013

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