Query 042616
Match_columns 220
No_of_seqs 183 out of 1284
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 13:41:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042616.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042616hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dr5_A Putative O-methyltransf 100.0 8.6E-29 2.9E-33 208.6 19.9 150 21-178 34-213 (221)
2 3r3h_A O-methyltransferase, SA 100.0 8.5E-29 2.9E-33 211.2 15.3 163 22-192 42-235 (242)
3 3c3y_A Pfomt, O-methyltransfer 99.9 4.8E-27 1.7E-31 199.2 16.5 149 22-178 52-236 (237)
4 1sui_A Caffeoyl-COA O-methyltr 99.9 5.2E-27 1.8E-31 200.6 16.3 149 22-178 61-246 (247)
5 3tr6_A O-methyltransferase; ce 99.9 1.8E-25 6E-30 185.7 17.0 149 22-178 46-224 (225)
6 3cbg_A O-methyltransferase; cy 99.9 1.1E-25 3.9E-30 189.7 16.1 148 23-178 55-232 (232)
7 3ntv_A MW1564 protein; rossman 99.9 2.8E-25 9.6E-30 187.2 18.3 148 22-178 53-231 (232)
8 3u81_A Catechol O-methyltransf 99.9 3.8E-25 1.3E-29 184.4 18.6 152 22-181 40-216 (221)
9 3tfw_A Putative O-methyltransf 99.9 1.2E-24 3.9E-29 185.5 20.0 151 23-181 46-228 (248)
10 2avd_A Catechol-O-methyltransf 99.9 6.1E-25 2.1E-29 182.9 16.8 149 22-178 51-229 (229)
11 3duw_A OMT, O-methyltransferas 99.9 1.1E-24 3.6E-29 181.0 17.4 149 22-178 40-222 (223)
12 3c3p_A Methyltransferase; NP_9 99.9 5.1E-24 1.7E-28 175.8 19.7 148 22-178 38-209 (210)
13 2hnk_A SAM-dependent O-methylt 99.9 8.7E-23 3E-27 172.0 17.1 150 22-179 42-232 (239)
14 2gpy_A O-methyltransferase; st 99.9 1.2E-21 4E-26 164.1 18.4 151 20-179 34-215 (233)
15 3cvo_A Methyltransferase-like 99.9 1.4E-21 4.8E-26 163.6 13.1 122 22-159 14-162 (202)
16 2wk1_A NOVP; transferase, O-me 99.8 4.7E-19 1.6E-23 155.1 9.8 149 23-176 85-279 (282)
17 2bm8_A Cephalosporin hydroxyla 99.7 3.2E-16 1.1E-20 132.7 10.8 118 23-152 63-188 (236)
18 3fpf_A Mtnas, putative unchara 99.6 2.5E-14 8.5E-19 126.0 17.4 156 34-204 116-295 (298)
19 3mb5_A SAM-dependent methyltra 99.6 2.9E-14 1E-18 120.1 12.3 130 11-152 64-195 (255)
20 3e05_A Precorrin-6Y C5,15-meth 99.6 9.7E-14 3.3E-18 113.3 14.7 120 23-153 23-144 (204)
21 3njr_A Precorrin-6Y methylase; 99.5 1.3E-13 4.4E-18 113.8 15.1 118 22-153 37-156 (204)
22 3p9n_A Possible methyltransfer 99.5 2.7E-13 9.2E-18 109.5 15.9 106 39-151 43-153 (189)
23 2b2c_A Spermidine synthase; be 99.5 8.1E-14 2.8E-18 123.3 12.7 134 38-178 106-269 (314)
24 1xdz_A Methyltransferase GIDB; 99.5 1.3E-12 4.4E-17 109.7 18.6 101 39-150 69-173 (240)
25 2o07_A Spermidine synthase; st 99.5 1.5E-13 5E-18 120.9 11.8 134 38-178 93-256 (304)
26 2esr_A Methyltransferase; stru 99.5 1.1E-13 3.8E-18 110.2 9.7 106 38-151 29-138 (177)
27 3hm2_A Precorrin-6Y C5,15-meth 99.5 3.8E-13 1.3E-17 106.4 12.6 117 27-154 12-130 (178)
28 3orh_A Guanidinoacetate N-meth 99.5 1.9E-13 6.5E-18 115.3 11.2 116 30-153 48-172 (236)
29 1o54_A SAM-dependent O-methylt 99.5 2.5E-13 8.7E-18 116.4 11.0 133 8-152 80-214 (277)
30 2fpo_A Methylase YHHF; structu 99.5 7.7E-13 2.6E-17 108.8 12.7 105 39-150 53-159 (202)
31 2ift_A Putative methylase HI07 99.4 6.4E-13 2.2E-17 109.1 11.7 104 39-150 52-162 (201)
32 2fhp_A Methylase, putative; al 99.4 1.1E-12 3.8E-17 104.5 12.5 116 27-150 30-153 (187)
33 2b25_A Hypothetical protein; s 99.4 5.8E-13 2E-17 117.4 11.9 133 9-151 74-219 (336)
34 1l3i_A Precorrin-6Y methyltran 99.4 2.4E-12 8.2E-17 102.3 14.3 118 23-152 16-135 (192)
35 2pwy_A TRNA (adenine-N(1)-)-me 99.4 1.5E-12 5.1E-17 109.3 13.0 130 10-151 66-198 (258)
36 3mti_A RRNA methylase; SAM-dep 99.4 9.8E-13 3.3E-17 105.4 10.9 112 29-150 9-134 (185)
37 3lbf_A Protein-L-isoaspartate 99.4 7.4E-13 2.5E-17 108.2 10.3 112 23-150 60-173 (210)
38 3eey_A Putative rRNA methylase 99.4 1E-12 3.5E-17 106.3 11.1 108 37-150 19-138 (197)
39 1xj5_A Spermidine synthase 1; 99.4 2.1E-12 7E-17 115.2 12.8 120 30-156 108-241 (334)
40 4gek_A TRNA (CMO5U34)-methyltr 99.4 2.6E-12 8.9E-17 110.5 12.7 118 28-153 56-181 (261)
41 1i9g_A Hypothetical protein RV 99.4 1.4E-12 4.9E-17 111.1 10.8 130 11-151 70-203 (280)
42 1mjf_A Spermidine synthase; sp 99.4 2.7E-12 9.1E-17 111.2 12.3 132 37-177 72-238 (281)
43 3f4k_A Putative methyltransfer 99.4 2.1E-12 7.1E-17 108.3 11.1 116 28-152 34-151 (257)
44 3gjy_A Spermidine synthase; AP 99.4 4.7E-12 1.6E-16 112.4 13.6 107 39-152 86-201 (317)
45 3lpm_A Putative methyltransfer 99.4 2.2E-12 7.6E-17 109.6 11.0 114 28-149 36-174 (259)
46 1uir_A Polyamine aminopropyltr 99.4 2.5E-12 8.4E-17 113.3 11.5 128 37-173 74-234 (314)
47 1nkv_A Hypothetical protein YJ 99.4 2.4E-12 8.3E-17 107.8 11.0 120 22-151 18-140 (256)
48 2yvl_A TRMI protein, hypotheti 99.4 3.9E-12 1.4E-16 106.0 12.2 128 8-150 58-189 (248)
49 1ws6_A Methyltransferase; stru 99.4 3.3E-12 1.1E-16 100.2 10.4 99 40-150 41-146 (171)
50 2igt_A SAM dependent methyltra 99.4 3.7E-12 1.3E-16 113.3 11.9 115 31-154 143-275 (332)
51 3g89_A Ribosomal RNA small sub 99.4 4.1E-12 1.4E-16 108.3 11.5 131 9-150 35-183 (249)
52 3kkz_A Uncharacterized protein 99.4 2.7E-12 9.4E-17 108.8 10.3 115 30-153 36-152 (267)
53 3a27_A TYW2, uncharacterized p 99.4 2.7E-12 9.3E-17 110.6 10.4 114 24-150 103-218 (272)
54 3ajd_A Putative methyltransfer 99.4 3.4E-12 1.2E-16 109.9 11.0 123 24-153 67-213 (274)
55 3evz_A Methyltransferase; NYSG 99.3 8.3E-12 2.8E-16 103.2 12.5 118 23-149 38-177 (230)
56 1ixk_A Methyltransferase; open 99.3 4.5E-12 1.5E-16 111.6 11.4 127 20-154 98-249 (315)
57 1inl_A Spermidine synthase; be 99.3 5.2E-12 1.8E-16 110.4 11.6 107 38-151 88-205 (296)
58 2pbf_A Protein-L-isoaspartate 99.3 3.5E-12 1.2E-16 105.5 10.0 116 23-150 61-192 (227)
59 1yb2_A Hypothetical protein TA 99.3 1.6E-12 5.4E-17 111.6 8.1 127 12-150 82-210 (275)
60 1iy9_A Spermidine synthase; ro 99.3 5.2E-12 1.8E-16 109.3 11.0 107 38-151 73-189 (275)
61 1zx0_A Guanidinoacetate N-meth 99.3 7.8E-12 2.7E-16 104.4 11.6 116 29-152 47-171 (236)
62 3m4x_A NOL1/NOP2/SUN family pr 99.3 3.7E-12 1.3E-16 118.1 10.4 128 19-153 84-236 (456)
63 2yxe_A Protein-L-isoaspartate 99.3 8.6E-12 2.9E-16 102.1 11.1 115 23-150 60-176 (215)
64 1g8a_A Fibrillarin-like PRE-rR 99.3 8.4E-12 2.9E-16 103.3 11.1 103 39-150 72-177 (227)
65 1dus_A MJ0882; hypothetical pr 99.3 7.1E-12 2.4E-16 99.7 10.2 114 27-151 39-157 (194)
66 3adn_A Spermidine synthase; am 99.3 2.7E-12 9.2E-17 112.4 8.4 108 37-151 80-198 (294)
67 2qy6_A UPF0209 protein YFCK; s 99.3 5.9E-12 2E-16 108.5 10.0 108 38-150 58-212 (257)
68 2pt6_A Spermidine synthase; tr 99.3 9E-12 3.1E-16 110.2 11.5 108 37-151 113-230 (321)
69 2yxd_A Probable cobalt-precorr 99.3 5.7E-11 2E-15 93.7 14.9 113 22-151 17-131 (183)
70 2ozv_A Hypothetical protein AT 99.3 4.5E-12 1.5E-16 108.4 9.1 115 28-149 24-168 (260)
71 1dl5_A Protein-L-isoaspartate 99.3 8.8E-12 3E-16 109.3 11.2 117 21-150 56-174 (317)
72 2i7c_A Spermidine synthase; tr 99.3 1.2E-11 4E-16 107.4 11.6 116 30-152 66-193 (283)
73 3jwh_A HEN1; methyltransferase 99.3 2.6E-11 8.9E-16 99.5 13.1 119 23-149 12-139 (217)
74 1yzh_A TRNA (guanine-N(7)-)-me 99.3 2.2E-11 7.6E-16 100.2 12.5 104 39-150 40-155 (214)
75 3m6w_A RRNA methylase; rRNA me 99.3 6.3E-12 2.2E-16 116.7 10.2 126 20-153 81-231 (464)
76 3dxy_A TRNA (guanine-N(7)-)-me 99.3 1.2E-11 4.1E-16 103.3 10.9 103 39-149 33-148 (218)
77 2frn_A Hypothetical protein PH 99.3 7.3E-12 2.5E-16 108.1 9.9 101 39-152 124-226 (278)
78 3jwg_A HEN1, methyltransferase 99.3 2.9E-11 9.9E-16 99.2 12.8 118 24-149 13-139 (219)
79 3dlc_A Putative S-adenosyl-L-m 99.3 2.3E-11 7.7E-16 98.7 12.0 118 26-153 30-150 (219)
80 3kr9_A SAM-dependent methyltra 99.3 2E-11 6.7E-16 103.5 11.5 111 31-150 5-118 (225)
81 1jsx_A Glucose-inhibited divis 99.3 1.4E-11 4.9E-16 100.1 10.3 98 40-150 65-164 (207)
82 2b78_A Hypothetical protein SM 99.3 2.9E-11 1E-15 109.3 13.4 106 39-152 211-332 (385)
83 3ocj_A Putative exported prote 99.3 5.1E-12 1.7E-16 109.7 7.6 108 38-153 116-229 (305)
84 2frx_A Hypothetical protein YE 99.3 2E-11 7E-16 113.6 12.1 127 20-153 95-248 (479)
85 3v97_A Ribosomal RNA large sub 99.3 2.1E-11 7.3E-16 118.3 12.7 113 33-153 532-659 (703)
86 4df3_A Fibrillarin-like rRNA/T 99.3 3.2E-11 1.1E-15 102.7 12.3 104 38-149 75-180 (233)
87 1jg1_A PIMT;, protein-L-isoasp 99.3 1.5E-11 5E-16 102.8 10.0 113 23-150 74-188 (235)
88 3g5t_A Trans-aconitate 3-methy 99.3 6.6E-11 2.2E-15 102.1 14.1 131 7-149 8-147 (299)
89 3gdh_A Trimethylguanosine synt 99.3 2.7E-12 9.2E-17 107.1 5.2 110 30-150 68-180 (241)
90 1fbn_A MJ fibrillarin homologu 99.3 2E-11 7E-16 101.7 10.5 101 39-149 73-176 (230)
91 1i1n_A Protein-L-isoaspartate 99.3 2.6E-11 9E-16 100.1 10.9 115 24-150 59-181 (226)
92 3hem_A Cyclopropane-fatty-acyl 99.3 4.3E-11 1.5E-15 103.4 12.5 114 29-154 58-186 (302)
93 4htf_A S-adenosylmethionine-de 99.3 4.9E-11 1.7E-15 101.9 12.6 102 41-151 69-173 (285)
94 4dzr_A Protein-(glutamine-N5) 99.3 8.2E-12 2.8E-16 101.0 7.3 119 25-150 11-164 (215)
95 1vbf_A 231AA long hypothetical 99.3 3.4E-11 1.2E-15 99.6 11.1 113 22-150 52-164 (231)
96 2fca_A TRNA (guanine-N(7)-)-me 99.3 5.1E-11 1.7E-15 98.7 12.0 103 39-149 37-151 (213)
97 2b3t_A Protein methyltransfera 99.2 7.9E-11 2.7E-15 100.9 13.3 118 24-151 91-238 (276)
98 3tma_A Methyltransferase; thum 99.2 8E-11 2.7E-15 104.6 13.8 120 22-149 185-315 (354)
99 1nv8_A HEMK protein; class I a 99.2 1.1E-10 3.6E-15 101.4 14.2 116 24-150 104-248 (284)
100 3c0k_A UPF0064 protein YCCW; P 99.2 4.6E-11 1.6E-15 108.0 12.1 109 35-151 215-339 (396)
101 2as0_A Hypothetical protein PH 99.2 3.7E-11 1.3E-15 108.5 11.1 103 40-150 217-334 (396)
102 4dmg_A Putative uncharacterize 99.2 5E-11 1.7E-15 108.4 12.1 101 41-152 215-327 (393)
103 3ofk_A Nodulation protein S; N 99.2 2E-11 6.9E-16 99.8 8.6 110 29-150 40-153 (216)
104 3k6r_A Putative transferase PH 99.2 2.4E-11 8.2E-16 105.9 9.3 101 38-151 123-225 (278)
105 3dtn_A Putative methyltransfer 99.2 4.3E-11 1.5E-15 99.0 10.5 105 38-152 42-149 (234)
106 1wxx_A TT1595, hypothetical pr 99.2 3.5E-11 1.2E-15 108.4 10.7 102 40-151 209-325 (382)
107 3grz_A L11 mtase, ribosomal pr 99.2 3.3E-11 1.1E-15 98.1 9.4 114 26-153 45-161 (205)
108 1u2z_A Histone-lysine N-methyl 99.2 1.1E-10 3.9E-15 107.5 14.1 173 26-205 228-415 (433)
109 2ipx_A RRNA 2'-O-methyltransfe 99.2 6.9E-11 2.4E-15 98.4 11.5 104 39-150 76-181 (233)
110 3axs_A Probable N(2),N(2)-dime 99.2 2.6E-11 8.8E-16 110.5 9.5 102 39-149 51-156 (392)
111 3gu3_A Methyltransferase; alph 99.2 3.2E-11 1.1E-15 103.6 9.6 119 26-152 7-127 (284)
112 2gb4_A Thiopurine S-methyltran 99.2 9.4E-11 3.2E-15 100.2 12.3 117 23-148 51-188 (252)
113 3lec_A NADB-rossmann superfami 99.2 7.5E-11 2.6E-15 100.2 11.4 114 30-151 10-126 (230)
114 3bwc_A Spermidine synthase; SA 99.2 1.1E-10 3.8E-15 102.2 12.7 114 30-150 83-209 (304)
115 3id6_C Fibrillarin-like rRNA/T 99.2 8.5E-11 2.9E-15 99.9 11.5 104 38-150 74-180 (232)
116 2cmg_A Spermidine synthase; tr 99.2 2.1E-11 7.2E-16 105.1 7.7 95 39-150 71-170 (262)
117 3vc1_A Geranyl diphosphate 2-C 99.2 6.2E-11 2.1E-15 103.1 10.6 105 38-151 115-221 (312)
118 2xvm_A Tellurite resistance pr 99.2 1.3E-10 4.5E-15 93.1 11.7 105 33-149 25-134 (199)
119 1r18_A Protein-L-isoaspartate( 99.2 4.9E-11 1.7E-15 99.0 9.3 115 25-150 67-193 (227)
120 1nt2_A Fibrillarin-like PRE-rR 99.2 9.4E-11 3.2E-15 97.3 10.9 101 39-150 56-160 (210)
121 3bus_A REBM, methyltransferase 99.2 1.6E-10 5.6E-15 97.6 12.6 116 29-153 47-168 (273)
122 1xxl_A YCGJ protein; structura 99.2 1.5E-10 5.1E-15 96.7 12.1 112 28-150 9-123 (239)
123 2yxl_A PH0851 protein, 450AA l 99.2 7.3E-11 2.5E-15 108.7 11.1 124 23-153 242-391 (450)
124 3m70_A Tellurite resistance pr 99.2 1.5E-10 5.1E-15 99.0 12.3 108 30-149 111-221 (286)
125 2nxc_A L11 mtase, ribosomal pr 99.2 1.6E-10 5.4E-15 98.4 12.4 113 26-153 105-220 (254)
126 1vl5_A Unknown conserved prote 99.2 1E-10 3.5E-15 98.5 10.9 112 27-150 25-139 (260)
127 2dul_A N(2),N(2)-dimethylguano 99.2 1.4E-10 4.7E-15 105.0 12.4 102 39-150 46-163 (378)
128 1wzn_A SAM-dependent methyltra 99.2 2E-10 7E-15 95.9 12.4 112 28-150 26-144 (252)
129 2fk8_A Methoxy mycolic acid sy 99.2 1.5E-10 5.1E-15 100.6 12.0 113 29-153 76-196 (318)
130 3gnl_A Uncharacterized protein 99.2 1.4E-10 4.6E-15 99.5 11.4 140 31-178 11-162 (244)
131 3mgg_A Methyltransferase; NYSG 99.2 9E-11 3.1E-15 99.5 10.2 113 29-150 26-141 (276)
132 3dh0_A SAM dependent methyltra 99.2 1.1E-10 3.7E-15 95.5 10.3 114 29-151 27-143 (219)
133 2o57_A Putative sarcosine dime 99.2 1.8E-10 6.3E-15 98.8 12.3 108 37-153 79-189 (297)
134 1kpg_A CFA synthase;, cyclopro 99.2 2.5E-10 8.6E-15 97.5 12.7 112 30-153 51-170 (287)
135 2p7i_A Hypothetical protein; p 99.2 1.1E-10 3.9E-15 96.2 10.2 110 28-151 30-141 (250)
136 2qfm_A Spermine synthase; sper 99.2 1.3E-10 4.6E-15 104.7 11.4 106 40-153 188-316 (364)
137 4hg2_A Methyltransferase type 99.2 7.1E-11 2.4E-15 101.4 9.1 109 24-149 25-133 (257)
138 2yx1_A Hypothetical protein MJ 99.2 1.1E-10 3.6E-15 103.6 10.4 108 28-152 183-292 (336)
139 3bt7_A TRNA (uracil-5-)-methyl 99.2 1.1E-10 3.8E-15 104.7 10.6 86 41-134 214-316 (369)
140 2ex4_A Adrenal gland protein A 99.2 9.8E-11 3.3E-15 97.7 9.4 117 27-152 62-187 (241)
141 4dcm_A Ribosomal RNA large sub 99.2 1.1E-10 3.7E-15 105.4 10.3 110 31-149 213-332 (375)
142 3h2b_A SAM-dependent methyltra 99.2 1.8E-10 6.2E-15 93.2 10.6 113 24-151 26-141 (203)
143 3ou2_A SAM-dependent methyltra 99.2 2E-10 6.9E-15 93.3 10.8 111 28-152 34-147 (218)
144 3m33_A Uncharacterized protein 99.2 4.1E-11 1.4E-15 99.5 6.8 107 26-150 32-141 (226)
145 3lcc_A Putative methyl chlorid 99.2 8E-11 2.7E-15 97.7 8.4 101 39-150 65-170 (235)
146 1pjz_A Thiopurine S-methyltran 99.1 1.1E-10 3.6E-15 95.9 8.9 113 24-146 7-135 (203)
147 3ujc_A Phosphoethanolamine N-m 99.1 3E-10 1E-14 95.0 11.5 122 21-152 33-160 (266)
148 3ckk_A TRNA (guanine-N(7)-)-me 99.1 1.8E-10 6.2E-15 97.3 10.1 103 39-149 45-166 (235)
149 1ne2_A Hypothetical protein TA 99.1 6.3E-10 2.1E-14 90.2 12.8 113 22-152 30-148 (200)
150 3tm4_A TRNA (guanine N2-)-meth 99.1 2.1E-10 7.3E-15 103.1 10.9 119 23-150 201-330 (373)
151 1y8c_A S-adenosylmethionine-de 99.1 1.6E-10 5.3E-15 95.5 9.2 114 26-150 21-141 (246)
152 3dli_A Methyltransferase; PSI- 99.1 1.2E-10 4.2E-15 97.1 8.6 99 38-152 39-141 (240)
153 3thr_A Glycine N-methyltransfe 99.1 7.1E-10 2.4E-14 94.8 13.5 120 22-150 39-174 (293)
154 2kw5_A SLR1183 protein; struct 99.1 2.7E-10 9.4E-15 92.1 10.3 113 30-152 19-132 (202)
155 3g07_A 7SK snRNA methylphospha 99.1 1.7E-10 5.8E-15 99.9 9.6 107 39-152 45-221 (292)
156 2vdv_E TRNA (guanine-N(7)-)-me 99.1 3.4E-10 1.2E-14 95.3 11.1 102 40-149 49-171 (246)
157 3pfg_A N-methyltransferase; N, 99.1 9E-10 3.1E-14 92.8 13.7 113 29-156 38-156 (263)
158 2jjq_A Uncharacterized RNA met 99.1 4.7E-10 1.6E-14 102.9 12.7 109 25-149 274-385 (425)
159 1wy7_A Hypothetical protein PH 99.1 2.9E-09 1E-13 86.4 16.1 114 21-150 27-148 (207)
160 3q7e_A Protein arginine N-meth 99.1 2.9E-10 9.8E-15 101.3 10.7 104 37-150 63-172 (349)
161 2yqz_A Hypothetical protein TT 99.1 3.9E-10 1.3E-14 94.3 10.8 103 38-150 37-140 (263)
162 3dmg_A Probable ribosomal RNA 99.1 3E-10 1E-14 102.8 10.7 120 24-153 212-343 (381)
163 3e8s_A Putative SAM dependent 99.1 6.8E-10 2.3E-14 90.4 11.8 108 30-152 43-153 (227)
164 2qm3_A Predicted methyltransfe 99.1 4.9E-10 1.7E-14 100.5 11.9 97 40-145 172-271 (373)
165 3l8d_A Methyltransferase; stru 99.1 6.8E-10 2.3E-14 91.9 11.9 101 39-151 52-153 (242)
166 1uwv_A 23S rRNA (uracil-5-)-me 99.1 6.2E-10 2.1E-14 102.0 12.5 99 38-149 284-387 (433)
167 2p8j_A S-adenosylmethionine-de 99.1 3.6E-10 1.2E-14 91.6 9.6 119 25-152 8-129 (209)
168 3hnr_A Probable methyltransfer 99.1 3E-10 1E-14 92.9 9.2 111 26-151 32-145 (220)
169 1ve3_A Hypothetical protein PH 99.1 8.1E-10 2.8E-14 90.4 11.8 102 40-151 38-142 (227)
170 3uwp_A Histone-lysine N-methyl 99.1 1.5E-09 5.2E-14 99.6 14.7 157 35-199 168-338 (438)
171 3g5l_A Putative S-adenosylmeth 99.1 2.5E-10 8.5E-15 95.6 8.8 102 38-150 42-144 (253)
172 2fyt_A Protein arginine N-meth 99.1 4.7E-10 1.6E-14 99.6 11.0 107 32-148 56-168 (340)
173 3bkw_A MLL3908 protein, S-aden 99.1 4.8E-10 1.6E-14 92.7 10.1 110 30-150 33-143 (243)
174 1sqg_A SUN protein, FMU protei 99.1 5.2E-10 1.8E-14 102.2 11.0 122 23-153 229-376 (429)
175 3d2l_A SAM-dependent methyltra 99.1 5.6E-10 1.9E-14 92.3 10.0 108 31-150 23-136 (243)
176 1g6q_1 HnRNP arginine N-methyl 99.1 9.7E-10 3.3E-14 97.0 12.0 109 30-148 28-142 (328)
177 3bkx_A SAM-dependent methyltra 99.1 8.6E-10 3E-14 93.2 11.2 111 37-153 40-161 (275)
178 2h00_A Methyltransferase 10 do 99.1 1.8E-09 6.3E-14 90.7 13.1 93 26-122 46-150 (254)
179 4fsd_A Arsenic methyltransfera 99.1 6.2E-10 2.1E-14 100.0 10.7 109 38-152 81-204 (383)
180 3r0q_C Probable protein argini 99.1 5.6E-10 1.9E-14 100.4 10.5 105 37-152 60-170 (376)
181 3g2m_A PCZA361.24; SAM-depende 99.1 4.2E-10 1.4E-14 97.0 9.1 103 40-153 82-192 (299)
182 3cgg_A SAM-dependent methyltra 99.1 1.6E-09 5.5E-14 85.9 11.9 108 27-150 35-146 (195)
183 3tos_A CALS11; methyltransfera 99.1 1.2E-09 4E-14 94.3 11.7 134 39-178 68-256 (257)
184 2b9e_A NOL1/NOP2/SUN domain fa 99.1 3.7E-10 1.3E-14 99.6 8.7 99 20-122 82-184 (309)
185 3bzb_A Uncharacterized protein 99.1 1.5E-09 5.1E-14 93.6 12.4 96 39-141 78-191 (281)
186 1ri5_A MRNA capping enzyme; me 99.1 9E-10 3.1E-14 93.7 10.8 104 39-150 63-173 (298)
187 3sm3_A SAM-dependent methyltra 99.1 8.8E-10 3E-14 90.3 10.4 103 39-151 29-141 (235)
188 3sso_A Methyltransferase; macr 99.0 5.1E-10 1.7E-14 102.3 8.8 111 30-153 204-326 (419)
189 2y1w_A Histone-arginine methyl 99.0 1.5E-09 5.2E-14 96.5 11.6 102 37-149 47-153 (348)
190 3e23_A Uncharacterized protein 99.0 1.3E-09 4.4E-14 88.8 10.2 106 29-150 31-140 (211)
191 2r6z_A UPF0341 protein in RSP 99.0 2E-10 6.9E-15 98.7 5.6 88 29-122 72-171 (258)
192 2p35_A Trans-aconitate 2-methy 99.0 6.6E-10 2.3E-14 92.8 8.6 101 37-150 30-131 (259)
193 1o9g_A RRNA methyltransferase; 99.0 5.1E-10 1.7E-14 94.2 7.9 115 30-149 38-212 (250)
194 3ccf_A Cyclopropane-fatty-acyl 99.0 1.1E-09 3.7E-14 93.4 10.0 104 32-150 49-153 (279)
195 3mq2_A 16S rRNA methyltransfer 99.0 1E-09 3.4E-14 90.0 9.3 103 37-149 24-138 (218)
196 3ege_A Putative methyltransfer 99.0 9.8E-10 3.4E-14 93.0 9.5 112 23-150 17-130 (261)
197 1xtp_A LMAJ004091AAA; SGPP, st 99.0 1.9E-09 6.4E-14 89.8 10.9 104 38-151 91-198 (254)
198 3q87_B N6 adenine specific DNA 99.0 2E-09 6.8E-14 85.9 10.6 104 26-150 8-123 (170)
199 3bxo_A N,N-dimethyltransferase 99.0 4.6E-09 1.6E-13 86.5 12.7 103 39-156 39-146 (239)
200 3htx_A HEN1; HEN1, small RNA m 99.0 2.2E-09 7.5E-14 105.6 12.1 113 29-149 710-833 (950)
201 3iv6_A Putative Zn-dependent a 99.0 1.8E-09 6.2E-14 93.2 10.1 112 26-149 31-146 (261)
202 1ej0_A FTSJ; methyltransferase 99.0 1.3E-09 4.5E-14 84.6 8.4 105 30-150 12-135 (180)
203 4hc4_A Protein arginine N-meth 99.0 1.7E-09 5.6E-14 98.0 10.2 104 37-151 80-189 (376)
204 2pxx_A Uncharacterized protein 99.0 5.9E-10 2E-14 90.1 6.5 111 31-151 32-159 (215)
205 3gru_A Dimethyladenosine trans 99.0 3.9E-09 1.3E-13 92.6 11.8 107 20-136 29-136 (295)
206 3i9f_A Putative type 11 methyl 99.0 1.8E-09 6.2E-14 84.9 8.3 100 37-153 14-114 (170)
207 3p2e_A 16S rRNA methylase; met 99.0 9.2E-10 3.2E-14 92.2 6.9 114 25-149 11-137 (225)
208 3dp7_A SAM-dependent methyltra 98.9 6.3E-09 2.2E-13 92.7 12.3 107 39-153 178-290 (363)
209 2oyr_A UPF0341 protein YHIQ; a 98.9 9.8E-10 3.4E-14 94.7 6.3 88 29-122 75-174 (258)
210 3b3j_A Histone-arginine methyl 98.9 3E-09 1E-13 98.9 9.8 99 39-148 157-260 (480)
211 2gs9_A Hypothetical protein TT 98.9 3.2E-09 1.1E-13 86.3 8.3 97 40-152 36-133 (211)
212 3o4f_A Spermidine synthase; am 98.9 6.7E-09 2.3E-13 91.2 10.8 109 35-150 78-197 (294)
213 2qe6_A Uncharacterized protein 98.9 2.2E-08 7.4E-13 86.3 13.9 107 39-153 76-198 (274)
214 3ggd_A SAM-dependent methyltra 98.9 5.6E-09 1.9E-13 86.9 9.7 112 29-151 44-164 (245)
215 3fzg_A 16S rRNA methylase; met 98.9 5.4E-09 1.9E-13 86.8 9.4 115 26-153 34-154 (200)
216 2avn_A Ubiquinone/menaquinone 98.9 1E-08 3.4E-13 86.6 11.1 96 40-150 54-151 (260)
217 2pjd_A Ribosomal RNA small sub 98.9 3.4E-09 1.2E-13 93.8 8.4 115 29-153 185-306 (343)
218 2i62_A Nicotinamide N-methyltr 98.9 1.8E-09 6.3E-14 90.3 6.3 106 39-153 55-200 (265)
219 3fut_A Dimethyladenosine trans 98.9 1.6E-08 5.6E-13 87.6 12.3 113 1-122 1-120 (271)
220 1zq9_A Probable dimethyladenos 98.9 1.6E-08 5.6E-13 87.5 12.3 104 20-134 7-113 (285)
221 3gwz_A MMCR; methyltransferase 98.9 1.5E-08 5.1E-13 90.4 12.4 105 39-153 201-310 (369)
222 3ll7_A Putative methyltransfer 98.9 2.2E-09 7.5E-14 98.2 6.6 75 41-122 94-173 (410)
223 3tqs_A Ribosomal RNA small sub 98.9 8.4E-09 2.9E-13 88.5 9.9 95 20-122 8-106 (255)
224 3bgv_A MRNA CAP guanine-N7 met 98.9 2.7E-08 9.2E-13 86.3 13.2 104 40-151 34-155 (313)
225 1p91_A Ribosomal RNA large sub 98.9 8.6E-09 2.9E-13 87.0 9.4 109 24-150 67-177 (269)
226 3i53_A O-methyltransferase; CO 98.9 1.1E-08 3.7E-13 89.6 10.3 104 40-153 169-277 (332)
227 3mcz_A O-methyltransferase; ad 98.8 1.3E-08 4.5E-13 89.5 10.6 105 41-153 180-290 (352)
228 2h1r_A Dimethyladenosine trans 98.8 7E-09 2.4E-13 90.5 8.4 100 20-131 21-123 (299)
229 2r3s_A Uncharacterized protein 98.8 2.1E-08 7.2E-13 87.3 11.1 105 39-153 164-274 (335)
230 1m6y_A S-adenosyl-methyltransf 98.8 1.2E-08 4E-13 89.7 9.3 89 29-122 16-108 (301)
231 1qam_A ERMC' methyltransferase 98.8 3.3E-08 1.1E-12 83.7 11.7 105 23-137 13-117 (244)
232 2f8l_A Hypothetical protein LM 98.8 1.6E-08 5.6E-13 89.4 9.6 120 21-149 107-254 (344)
233 1qzz_A RDMB, aclacinomycin-10- 98.8 1.8E-08 6.2E-13 89.2 9.4 102 39-151 181-288 (374)
234 2ip2_A Probable phenazine-spec 98.8 3.9E-08 1.3E-12 85.8 11.3 102 42-153 169-275 (334)
235 1tw3_A COMT, carminomycin 4-O- 98.8 2.6E-08 8.8E-13 87.9 9.9 103 39-152 182-290 (360)
236 1x19_A CRTF-related protein; m 98.8 5.9E-08 2E-12 85.9 12.3 104 38-152 188-297 (359)
237 1vlm_A SAM-dependent methyltra 98.8 2.6E-08 8.9E-13 81.8 8.7 104 29-152 36-140 (219)
238 3cc8_A Putative methyltransfer 98.7 2.1E-08 7.2E-13 81.6 7.8 97 39-150 31-129 (230)
239 2g72_A Phenylethanolamine N-me 98.7 2.4E-08 8.3E-13 85.5 8.5 105 40-152 71-216 (289)
240 2aot_A HMT, histamine N-methyl 98.7 3.5E-08 1.2E-12 84.8 9.2 106 39-150 51-171 (292)
241 2plw_A Ribosomal RNA methyltra 98.7 5E-08 1.7E-12 78.5 9.3 97 39-150 21-153 (201)
242 2ih2_A Modification methylase 98.7 3.4E-08 1.2E-12 88.7 8.6 89 20-121 19-107 (421)
243 2a14_A Indolethylamine N-methy 98.7 2.5E-08 8.4E-13 84.7 6.7 108 39-154 54-200 (263)
244 3dou_A Ribosomal RNA large sub 98.7 6.4E-08 2.2E-12 79.0 8.7 93 39-150 24-138 (191)
245 2vdw_A Vaccinia virus capping 98.7 1.5E-07 5E-12 82.3 11.2 104 40-152 48-170 (302)
246 3hp7_A Hemolysin, putative; st 98.7 6E-08 2.1E-12 84.9 8.4 113 23-149 65-183 (291)
247 3ldu_A Putative methylase; str 98.6 9.8E-08 3.3E-12 86.3 9.6 95 24-122 179-311 (385)
248 2zfu_A Nucleomethylin, cerebra 98.6 4.4E-08 1.5E-12 79.8 6.5 100 27-153 54-153 (215)
249 3uzu_A Ribosomal RNA small sub 98.6 1.6E-07 5.4E-12 81.6 10.2 81 20-105 21-102 (279)
250 3k0b_A Predicted N6-adenine-sp 98.6 1.8E-07 6E-12 84.9 10.9 96 23-122 184-317 (393)
251 3lst_A CALO1 methyltransferase 98.6 1.1E-07 3.7E-12 84.0 8.7 102 39-153 183-289 (348)
252 4e2x_A TCAB9; kijanose, tetron 98.6 3.8E-08 1.3E-12 88.7 5.8 100 39-150 106-207 (416)
253 3giw_A Protein of unknown func 98.6 2.3E-07 7.9E-12 80.7 10.5 117 32-154 70-203 (277)
254 3opn_A Putative hemolysin; str 98.6 1.1E-07 3.8E-12 80.1 8.2 114 22-149 16-135 (232)
255 2nyu_A Putative ribosomal RNA 98.6 1.4E-07 4.6E-12 75.5 8.3 97 39-150 21-144 (196)
256 3ldg_A Putative uncharacterize 98.6 3.1E-07 1.1E-11 83.2 11.2 95 24-122 178-310 (384)
257 3ftd_A Dimethyladenosine trans 98.6 5.2E-07 1.8E-11 76.9 11.9 106 20-136 10-117 (249)
258 4a6d_A Hydroxyindole O-methylt 98.5 8.3E-07 2.9E-11 78.8 12.7 106 39-154 178-287 (353)
259 1af7_A Chemotaxis receptor met 98.5 7.2E-07 2.5E-11 77.2 11.7 122 23-150 87-251 (274)
260 2oo3_A Protein involved in cat 98.5 2.7E-07 9.1E-12 80.5 8.8 125 24-156 76-204 (283)
261 1qyr_A KSGA, high level kasuga 98.5 2.6E-07 9E-12 78.9 8.5 90 24-122 5-100 (252)
262 4azs_A Methyltransferase WBDD; 98.5 3.1E-07 1.1E-11 86.7 9.4 73 39-118 65-140 (569)
263 4fzv_A Putative methyltransfer 98.5 6.7E-07 2.3E-11 80.4 10.5 119 28-153 136-286 (359)
264 2okc_A Type I restriction enzy 98.5 2.6E-07 9E-12 84.6 8.0 129 21-156 152-315 (445)
265 3c6k_A Spermine synthase; sper 98.4 9.6E-07 3.3E-11 79.9 10.8 104 39-150 204-330 (381)
266 2ar0_A M.ecoki, type I restric 98.4 1.1E-06 3.7E-11 82.8 10.8 132 20-156 149-320 (541)
267 2xyq_A Putative 2'-O-methyl tr 98.4 1.1E-06 3.9E-11 76.7 9.7 93 38-151 61-171 (290)
268 2wa2_A Non-structural protein 98.4 1.5E-07 5.1E-12 81.5 3.8 97 40-150 82-192 (276)
269 3frh_A 16S rRNA methylase; met 98.4 2.7E-06 9.4E-11 72.9 10.8 114 27-153 92-208 (253)
270 2oxt_A Nucleoside-2'-O-methylt 98.4 2.1E-07 7.3E-12 80.0 3.9 114 23-150 55-184 (265)
271 1yub_A Ermam, rRNA methyltrans 98.3 6.7E-08 2.3E-12 81.4 0.2 92 23-122 12-103 (245)
272 2p41_A Type II methyltransfera 98.3 3.2E-07 1.1E-11 80.4 4.3 112 24-150 64-190 (305)
273 3p9c_A Caffeic acid O-methyltr 98.3 1.2E-06 4E-11 78.2 8.0 99 39-153 200-301 (364)
274 3reo_A (ISO)eugenol O-methyltr 98.3 1.3E-06 4.5E-11 77.9 8.1 98 40-153 203-303 (368)
275 4gqb_A Protein arginine N-meth 98.3 1.2E-06 4E-11 84.2 7.7 101 41-149 358-465 (637)
276 3lcv_B Sisomicin-gentamicin re 98.3 1.8E-06 6.1E-11 74.9 7.5 117 26-152 117-237 (281)
277 3v97_A Ribosomal RNA large sub 98.2 9.1E-06 3.1E-10 78.8 12.2 97 24-122 174-313 (703)
278 1fp2_A Isoflavone O-methyltran 98.2 2.4E-06 8.4E-11 75.3 6.8 99 39-153 187-291 (352)
279 3ua3_A Protein arginine N-meth 98.2 3E-06 1E-10 82.1 7.3 105 41-150 410-533 (745)
280 1fp1_D Isoliquiritigenin 2'-O- 98.1 2.5E-06 8.7E-11 75.8 5.5 94 40-150 209-305 (372)
281 3pvc_A TRNA 5-methylaminomethy 98.1 8.8E-06 3E-10 78.1 8.6 108 39-153 57-213 (689)
282 1wg8_A Predicted S-adenosylmet 98.0 3E-05 1E-09 67.6 10.0 88 29-128 12-103 (285)
283 1zg3_A Isoflavanone 4'-O-methy 98.0 1.5E-05 5.1E-10 70.4 7.4 98 40-153 193-296 (358)
284 3khk_A Type I restriction-modi 97.9 9.6E-06 3.3E-10 76.5 6.2 100 20-122 225-339 (544)
285 2ld4_A Anamorsin; methyltransf 97.8 1.7E-05 5.8E-10 62.5 5.2 88 39-152 11-102 (176)
286 3lkd_A Type I restriction-modi 97.8 7.7E-05 2.6E-09 70.3 9.5 132 20-156 197-366 (542)
287 2k4m_A TR8_protein, UPF0146 pr 97.7 9.8E-05 3.3E-09 58.6 7.5 88 36-150 30-120 (153)
288 3s1s_A Restriction endonucleas 97.7 0.00025 8.4E-09 69.8 11.9 101 20-122 295-409 (878)
289 3tka_A Ribosomal RNA small sub 97.5 0.00019 6.4E-09 64.1 7.3 87 29-122 47-138 (347)
290 1i4w_A Mitochondrial replicati 97.5 0.00027 9.3E-09 63.3 8.0 80 20-105 31-117 (353)
291 3vyw_A MNMC2; tRNA wobble urid 97.5 0.0014 4.9E-08 57.5 12.4 133 38-178 94-260 (308)
292 3s2e_A Zinc-containing alcohol 97.2 0.001 3.5E-08 57.9 8.8 102 37-152 163-264 (340)
293 4auk_A Ribosomal RNA large sub 97.2 0.0011 3.8E-08 59.8 8.2 72 38-122 209-280 (375)
294 4a2c_A Galactitol-1-phosphate 97.1 0.0052 1.8E-07 53.3 11.5 107 35-154 155-263 (346)
295 1pl8_A Human sorbitol dehydrog 97.1 0.017 5.7E-07 50.6 14.8 99 37-152 168-274 (356)
296 4eez_A Alcohol dehydrogenase 1 97.0 0.0081 2.8E-07 52.1 12.2 103 37-152 160-264 (348)
297 2zig_A TTHA0409, putative modi 97.0 0.0024 8.2E-08 55.1 8.5 45 39-89 234-278 (297)
298 1f8f_A Benzyl alcohol dehydrog 97.0 0.0022 7.4E-08 56.6 8.1 102 38-153 188-291 (371)
299 3ps9_A TRNA 5-methylaminomethy 97.0 0.0044 1.5E-07 59.1 10.7 108 41-153 67-221 (676)
300 4ej6_A Putative zinc-binding d 96.9 0.0037 1.3E-07 55.4 9.4 106 35-154 177-287 (370)
301 1pqw_A Polyketide synthase; ro 96.8 0.0026 9.1E-08 50.8 6.9 100 38-152 36-138 (198)
302 3ufb_A Type I restriction-modi 96.8 0.0091 3.1E-07 55.9 11.3 100 20-122 197-312 (530)
303 3m6i_A L-arabinitol 4-dehydrog 96.8 0.023 7.8E-07 49.7 13.2 102 36-152 175-284 (363)
304 3fpc_A NADP-dependent alcohol 96.8 0.0019 6.6E-08 56.5 6.1 105 36-154 162-269 (352)
305 3g7u_A Cytosine-specific methy 96.7 0.0037 1.3E-07 56.1 7.9 97 42-153 3-121 (376)
306 2dph_A Formaldehyde dismutase; 96.7 0.0037 1.3E-07 55.7 7.6 106 36-153 181-301 (398)
307 3uko_A Alcohol dehydrogenase c 96.7 0.0032 1.1E-07 55.7 7.1 105 38-154 191-298 (378)
308 1p0f_A NADP-dependent alcohol 96.7 0.0053 1.8E-07 54.1 8.3 101 38-153 189-295 (373)
309 1g55_A DNA cytosine methyltran 96.6 0.0029 9.8E-08 56.0 6.4 101 41-153 2-121 (343)
310 1uuf_A YAHK, zinc-type alcohol 96.6 0.012 4.1E-07 52.1 10.5 99 37-152 191-289 (369)
311 1e3j_A NADP(H)-dependent ketos 96.6 0.01 3.4E-07 51.9 9.7 102 36-152 164-272 (352)
312 1e3i_A Alcohol dehydrogenase, 96.6 0.0062 2.1E-07 53.7 8.3 99 39-152 194-298 (376)
313 1cdo_A Alcohol dehydrogenase; 96.6 0.0071 2.4E-07 53.3 8.5 101 38-153 190-296 (374)
314 3ip1_A Alcohol dehydrogenase, 96.6 0.0062 2.1E-07 54.5 8.1 105 38-153 211-320 (404)
315 2jhf_A Alcohol dehydrogenase E 96.5 0.0079 2.7E-07 53.0 8.5 101 38-153 189-295 (374)
316 2fzw_A Alcohol dehydrogenase c 96.5 0.0081 2.8E-07 52.9 8.5 101 38-153 188-294 (373)
317 2py6_A Methyltransferase FKBM; 96.5 0.0043 1.5E-07 56.2 6.7 51 38-90 224-274 (409)
318 3jv7_A ADH-A; dehydrogenase, n 96.4 0.014 4.8E-07 50.7 9.4 103 37-153 168-272 (345)
319 4dvj_A Putative zinc-dependent 96.4 0.0098 3.4E-07 52.4 8.4 97 40-150 171-269 (363)
320 3uog_A Alcohol dehydrogenase; 96.4 0.011 3.8E-07 51.9 8.6 98 38-153 187-289 (363)
321 2h6e_A ADH-4, D-arabinose 1-de 96.4 0.024 8.3E-07 49.3 10.5 100 37-152 168-270 (344)
322 3jyn_A Quinone oxidoreductase; 96.4 0.0062 2.1E-07 52.6 6.6 101 38-153 138-241 (325)
323 3qwb_A Probable quinone oxidor 96.3 0.005 1.7E-07 53.4 5.9 100 38-153 146-249 (334)
324 2c0c_A Zinc binding alcohol de 96.3 0.011 3.8E-07 52.0 8.2 101 36-152 159-262 (362)
325 1kol_A Formaldehyde dehydrogen 96.3 0.012 4.1E-07 52.3 8.4 105 37-153 182-302 (398)
326 1rjw_A ADH-HT, alcohol dehydro 96.3 0.012 4.2E-07 51.1 8.3 102 37-153 161-263 (339)
327 2c7p_A Modification methylase 96.2 0.031 1.1E-06 49.1 10.5 97 41-153 11-122 (327)
328 1vj0_A Alcohol dehydrogenase, 96.2 0.0089 3.1E-07 53.0 7.0 99 38-153 193-300 (380)
329 4b7c_A Probable oxidoreductase 96.2 0.0096 3.3E-07 51.5 7.0 103 36-152 145-249 (336)
330 1piw_A Hypothetical zinc-type 96.2 0.011 3.7E-07 51.9 7.4 101 37-152 176-277 (360)
331 4eye_A Probable oxidoreductase 96.1 0.012 4.1E-07 51.3 7.3 97 38-151 157-257 (342)
332 1iz0_A Quinone oxidoreductase; 96.1 0.023 7.8E-07 48.4 8.9 94 38-151 123-218 (302)
333 3two_A Mannitol dehydrogenase; 96.1 0.026 9E-07 49.1 9.3 94 37-152 173-266 (348)
334 3fbg_A Putative arginate lyase 96.0 0.027 9.1E-07 49.1 8.9 96 40-150 150-247 (346)
335 1v3u_A Leukotriene B4 12- hydr 96.0 0.014 4.9E-07 50.4 6.9 101 37-152 142-245 (333)
336 2b5w_A Glucose dehydrogenase; 96.0 0.024 8.3E-07 49.6 8.5 96 42-153 174-275 (357)
337 2d8a_A PH0655, probable L-thre 95.8 0.019 6.5E-07 50.0 7.1 98 40-152 167-268 (348)
338 4dup_A Quinone oxidoreductase; 95.8 0.013 4.4E-07 51.3 6.1 101 38-153 165-267 (353)
339 2cf5_A Atccad5, CAD, cinnamyl 95.8 0.022 7.6E-07 49.9 7.5 97 40-152 180-276 (357)
340 3gms_A Putative NADPH:quinone 95.7 0.013 4.3E-07 51.0 5.7 102 37-153 141-245 (340)
341 3gaz_A Alcohol dehydrogenase s 95.7 0.027 9.3E-07 49.0 7.8 96 38-151 148-246 (343)
342 3gqv_A Enoyl reductase; medium 95.7 0.11 3.9E-06 45.6 11.7 101 39-153 163-265 (371)
343 2j3h_A NADP-dependent oxidored 95.7 0.016 5.6E-07 50.2 6.1 102 37-152 152-256 (345)
344 1yqd_A Sinapyl alcohol dehydro 95.7 0.062 2.1E-06 47.2 9.9 97 40-152 187-283 (366)
345 1wly_A CAAR, 2-haloacrylate re 95.6 0.018 6.2E-07 49.8 6.2 100 38-152 143-245 (333)
346 3r24_A NSP16, 2'-O-methyl tran 95.6 0.097 3.3E-06 46.0 10.6 90 41-150 110-216 (344)
347 2hcy_A Alcohol dehydrogenase 1 95.6 0.048 1.7E-06 47.4 8.9 102 38-153 167-271 (347)
348 4a0s_A Octenoyl-COA reductase/ 95.6 0.044 1.5E-06 49.4 8.9 101 37-152 217-337 (447)
349 3evf_A RNA-directed RNA polyme 95.5 0.013 4.6E-07 50.6 4.6 123 23-155 55-187 (277)
350 2zb4_A Prostaglandin reductase 95.4 0.035 1.2E-06 48.4 7.3 102 37-152 155-261 (357)
351 1qor_A Quinone oxidoreductase; 95.4 0.02 6.9E-07 49.3 5.6 100 38-152 138-240 (327)
352 3fwz_A Inner membrane protein 95.4 0.069 2.4E-06 40.3 8.1 92 42-149 8-103 (140)
353 2dq4_A L-threonine 3-dehydroge 95.3 0.015 5.1E-07 50.6 4.7 97 40-152 164-263 (343)
354 2j8z_A Quinone oxidoreductase; 95.3 0.021 7.3E-07 49.9 5.7 100 38-153 160-263 (354)
355 2eih_A Alcohol dehydrogenase; 95.3 0.022 7.5E-07 49.5 5.7 98 39-152 165-266 (343)
356 3goh_A Alcohol dehydrogenase, 95.3 0.03 1E-06 48.0 6.4 89 38-150 140-228 (315)
357 1yb5_A Quinone oxidoreductase; 95.2 0.026 8.9E-07 49.5 5.8 99 38-151 168-269 (351)
358 3tqh_A Quinone oxidoreductase; 95.1 0.14 4.6E-06 44.0 10.0 96 36-151 148-245 (321)
359 1jvb_A NAD(H)-dependent alcoho 95.1 0.048 1.6E-06 47.4 7.2 102 37-152 167-272 (347)
360 4dzz_A Plasmid partitioning pr 95.1 0.047 1.6E-06 43.1 6.5 82 50-137 11-97 (206)
361 3krt_A Crotonyl COA reductase; 95.0 0.13 4.5E-06 46.5 10.2 102 37-153 225-346 (456)
362 2vn8_A Reticulon-4-interacting 94.9 0.061 2.1E-06 47.3 7.4 98 38-151 181-280 (375)
363 3k9g_A PF-32 protein; ssgcid, 94.9 0.07 2.4E-06 44.3 7.4 40 39-80 25-67 (267)
364 1g60_A Adenine-specific methyl 94.9 0.026 9E-07 47.5 4.8 54 94-150 4-73 (260)
365 3nx4_A Putative oxidoreductase 94.9 0.12 4E-06 44.3 9.0 93 43-153 149-243 (324)
366 1boo_A Protein (N-4 cytosine-s 94.8 0.048 1.6E-06 47.6 6.4 54 93-149 13-82 (323)
367 3pi7_A NADH oxidoreductase; gr 94.8 0.12 4E-06 44.9 8.9 97 42-153 166-265 (349)
368 1pjc_A Protein (L-alanine dehy 94.8 0.1 3.6E-06 46.0 8.6 100 39-149 165-265 (361)
369 1g60_A Adenine-specific methyl 94.7 0.078 2.7E-06 44.5 7.2 45 39-89 211-255 (260)
370 3c85_A Putative glutathione-re 94.6 0.4 1.4E-05 37.4 10.7 94 41-149 39-137 (183)
371 1lss_A TRK system potassium up 94.5 0.46 1.6E-05 34.6 10.5 94 41-148 4-100 (140)
372 3ggo_A Prephenate dehydrogenas 94.4 0.35 1.2E-05 41.9 10.9 96 42-156 34-132 (314)
373 2qrv_A DNA (cytosine-5)-methyl 94.4 0.22 7.4E-06 43.1 9.5 102 39-153 14-142 (295)
374 3e8x_A Putative NAD-dependent 94.3 0.43 1.5E-05 38.4 10.6 74 40-122 20-94 (236)
375 3ea0_A ATPase, para family; al 94.3 0.045 1.5E-06 44.5 4.6 38 41-79 4-45 (245)
376 2oze_A ORF delta'; para, walke 94.2 0.3 1E-05 41.1 9.8 39 41-80 34-77 (298)
377 1eg2_A Modification methylase 94.2 0.07 2.4E-06 46.6 6.0 54 93-149 37-104 (319)
378 2g1u_A Hypothetical protein TM 94.2 0.38 1.3E-05 36.6 9.5 76 38-122 16-94 (155)
379 2cdc_A Glucose dehydrogenase g 94.0 0.087 3E-06 46.1 6.2 96 41-153 181-280 (366)
380 1xa0_A Putative NADPH dependen 93.9 0.1 3.5E-06 44.7 6.5 95 43-153 152-248 (328)
381 2vhw_A Alanine dehydrogenase; 93.9 0.15 5.1E-06 45.4 7.7 100 39-149 166-266 (377)
382 2eez_A Alanine dehydrogenase; 93.8 0.2 6.7E-06 44.3 8.2 101 39-150 164-265 (369)
383 3gg2_A Sugar dehydrogenase, UD 93.7 0.56 1.9E-05 42.8 11.3 103 42-156 3-127 (450)
384 3p8z_A Mtase, non-structural p 93.7 0.043 1.5E-06 46.8 3.4 121 22-156 58-190 (267)
385 3gcz_A Polyprotein; flavivirus 93.7 0.029 1E-06 48.6 2.5 120 23-154 71-203 (282)
386 1zu4_A FTSY; GTPase, signal re 93.6 0.25 8.4E-06 43.1 8.3 81 41-122 105-201 (320)
387 3la6_A Tyrosine-protein kinase 93.6 0.093 3.2E-06 45.0 5.5 41 39-80 90-133 (286)
388 4h0n_A DNMT2; SAH binding, tra 93.5 0.23 7.7E-06 43.7 8.0 100 42-153 4-121 (333)
389 1bg6_A N-(1-D-carboxylethyl)-L 93.5 0.49 1.7E-05 40.7 10.0 97 41-150 4-108 (359)
390 1tt7_A YHFP; alcohol dehydroge 93.5 0.11 3.7E-06 44.7 5.8 93 43-153 153-249 (330)
391 3end_A Light-independent proto 93.4 0.021 7.3E-07 48.7 1.2 43 37-80 37-81 (307)
392 3ic5_A Putative saccharopine d 93.4 0.55 1.9E-05 33.1 8.8 85 41-137 5-92 (118)
393 3eld_A Methyltransferase; flav 93.4 0.098 3.4E-06 45.6 5.3 121 22-154 61-193 (300)
394 3llv_A Exopolyphosphatase-rela 93.3 0.44 1.5E-05 35.4 8.4 86 41-137 6-94 (141)
395 1gu7_A Enoyl-[acyl-carrier-pro 93.3 0.13 4.3E-06 44.8 6.0 99 39-153 165-277 (364)
396 3q9l_A Septum site-determining 93.1 0.13 4.6E-06 42.0 5.6 34 44-78 5-41 (260)
397 1id1_A Putative potassium chan 93.1 0.54 1.8E-05 35.6 8.8 75 41-122 3-81 (153)
398 2g5c_A Prephenate dehydrogenas 93.1 0.71 2.4E-05 38.5 10.2 89 42-148 2-93 (281)
399 4a27_A Synaptic vesicle membra 93.1 0.11 3.6E-06 45.3 5.2 98 38-152 140-239 (349)
400 3ubt_Y Modification methylase 93.1 0.45 1.5E-05 40.8 9.1 95 43-153 2-112 (331)
401 3dqp_A Oxidoreductase YLBE; al 93.1 0.6 2.1E-05 37.1 9.4 84 43-137 2-96 (219)
402 2xj4_A MIPZ; replication, cell 93.0 0.15 5.2E-06 43.0 5.9 93 50-150 14-134 (286)
403 2px2_A Genome polyprotein [con 93.0 0.02 6.7E-07 49.2 0.2 117 23-155 54-186 (269)
404 2zig_A TTHA0409, putative modi 92.9 0.17 5.9E-06 43.2 6.2 30 93-122 20-50 (297)
405 1wcv_1 SOJ, segregation protei 92.8 0.57 1.9E-05 38.6 9.1 40 40-80 5-47 (257)
406 1jw9_B Molybdopterin biosynthe 92.7 0.48 1.6E-05 39.6 8.6 78 41-122 31-131 (249)
407 1g3q_A MIND ATPase, cell divis 92.6 0.33 1.1E-05 39.1 7.2 35 44-79 5-42 (237)
408 1y6j_A L-lactate dehydrogenase 92.4 1.1 3.8E-05 38.8 10.7 99 40-149 6-121 (318)
409 1lld_A L-lactate dehydrogenase 92.3 2 6.9E-05 36.4 12.2 76 40-122 6-85 (319)
410 3l4b_C TRKA K+ channel protien 92.2 1.1 3.8E-05 35.9 10.0 93 43-149 2-97 (218)
411 3lkz_A Non-structural protein 92.2 0.15 5.2E-06 44.6 4.9 185 22-217 74-300 (321)
412 3me5_A Cytosine-specific methy 92.2 0.69 2.4E-05 42.8 9.6 100 42-153 89-229 (482)
413 3cwq_A Para family chromosome 92.2 0.36 1.2E-05 38.9 6.9 65 50-122 10-77 (209)
414 2xxa_A Signal recognition part 92.0 0.16 5.4E-06 46.3 5.0 107 41-152 100-224 (433)
415 2y0c_A BCEC, UDP-glucose dehyd 92.0 0.88 3E-05 41.8 10.1 107 38-156 5-133 (478)
416 3ez2_A Plasmid partition prote 91.9 0.43 1.5E-05 42.2 7.7 38 42-80 108-155 (398)
417 3l9w_A Glutathione-regulated p 91.9 0.41 1.4E-05 43.2 7.6 85 41-137 4-92 (413)
418 3cio_A ETK, tyrosine-protein k 91.8 0.14 4.7E-06 44.0 4.2 40 39-79 102-144 (299)
419 1y1p_A ARII, aldehyde reductas 91.6 0.62 2.1E-05 39.2 8.0 80 40-122 10-93 (342)
420 3vku_A L-LDH, L-lactate dehydr 91.5 3.8 0.00013 35.8 13.1 103 40-152 8-127 (326)
421 2gn4_A FLAA1 protein, UDP-GLCN 91.5 0.51 1.7E-05 40.8 7.5 80 38-122 18-101 (344)
422 1j8m_F SRP54, signal recogniti 91.5 0.14 4.7E-06 44.2 3.8 106 41-151 98-222 (297)
423 2xxj_A L-LDH, L-lactate dehydr 91.4 4.1 0.00014 35.0 13.2 73 43-122 2-77 (310)
424 1l7d_A Nicotinamide nucleotide 91.4 0.44 1.5E-05 42.3 7.1 43 40-86 171-213 (384)
425 2v6b_A L-LDH, L-lactate dehydr 91.2 3.7 0.00013 35.0 12.7 99 43-152 2-118 (304)
426 3iup_A Putative NADPH:quinone 91.2 0.26 9E-06 43.4 5.4 91 39-136 169-263 (379)
427 3ce6_A Adenosylhomocysteinase; 91.2 1.1 3.7E-05 41.6 9.7 89 38-149 271-359 (494)
428 3ez9_A Para; DNA binding, wing 91.1 0.31 1.1E-05 43.2 5.9 41 39-80 109-158 (403)
429 1fmc_A 7 alpha-hydroxysteroid 91.1 0.65 2.2E-05 37.6 7.4 80 40-122 10-98 (255)
430 3k96_A Glycerol-3-phosphate de 91.1 1.3 4.3E-05 39.1 9.8 95 41-149 29-131 (356)
431 2aef_A Calcium-gated potassium 91.0 1.5 5E-05 35.5 9.4 92 41-150 9-104 (234)
432 4g65_A TRK system potassium up 90.9 0.84 2.9E-05 41.7 8.7 74 40-122 2-78 (461)
433 1f0y_A HCDH, L-3-hydroxyacyl-C 90.9 1.6 5.3E-05 37.0 9.9 99 41-153 15-137 (302)
434 1smk_A Malate dehydrogenase, g 90.9 3.2 0.00011 35.9 12.0 76 40-122 7-86 (326)
435 1boo_A Protein (N-4 cytosine-s 90.8 0.18 6.2E-06 43.8 3.9 76 24-106 237-312 (323)
436 3ruf_A WBGU; rossmann fold, UD 90.8 0.48 1.6E-05 40.4 6.6 80 40-122 24-110 (351)
437 1h2b_A Alcohol dehydrogenase; 90.8 0.53 1.8E-05 41.0 7.0 101 36-152 182-286 (359)
438 1ez4_A Lactate dehydrogenase; 90.7 4.2 0.00014 35.1 12.6 76 40-122 4-82 (318)
439 4g65_A TRK system potassium up 90.6 2.3 7.8E-05 38.8 11.3 113 27-152 220-336 (461)
440 3qvo_A NMRA family protein; st 90.6 1.3 4.4E-05 35.8 8.8 73 41-122 23-98 (236)
441 1a5z_A L-lactate dehydrogenase 90.6 5 0.00017 34.4 13.0 100 43-152 2-118 (319)
442 3o26_A Salutaridine reductase; 90.6 0.54 1.8E-05 39.2 6.6 80 40-122 11-101 (311)
443 3ew7_A LMO0794 protein; Q8Y8U8 90.6 1.1 3.9E-05 35.1 8.2 70 43-122 2-71 (221)
444 3pqe_A L-LDH, L-lactate dehydr 90.6 5 0.00017 34.9 13.0 76 40-122 4-83 (326)
445 2nvu_B Maltose binding protein 90.5 3 0.0001 40.4 12.7 80 40-122 410-510 (805)
446 3bfv_A CAPA1, CAPB2, membrane 90.4 0.21 7.3E-06 42.2 3.9 40 40-80 81-123 (271)
447 3dm5_A SRP54, signal recogniti 90.4 0.63 2.2E-05 42.6 7.3 107 41-152 100-223 (443)
448 3eqz_A Response regulator; str 90.4 2.6 8.8E-05 29.8 9.4 68 68-137 4-71 (135)
449 3f6c_A Positive transcription 90.3 1 3.5E-05 32.1 7.2 68 69-137 3-71 (134)
450 2rjn_A Response regulator rece 90.3 2.5 8.4E-05 31.0 9.5 69 67-137 7-76 (154)
451 2zqz_A L-LDH, L-lactate dehydr 90.3 5.9 0.0002 34.3 13.2 77 39-122 7-86 (326)
452 3h8v_A Ubiquitin-like modifier 90.2 1.2 4.1E-05 38.4 8.6 58 40-101 35-113 (292)
453 3h2s_A Putative NADH-flavin re 90.2 1.6 5.4E-05 34.4 8.9 71 43-122 2-72 (224)
454 3awd_A GOX2181, putative polyo 90.2 0.86 3E-05 37.0 7.4 79 40-121 12-99 (260)
455 3eod_A Protein HNR; response r 90.1 1.9 6.6E-05 30.5 8.5 69 67-137 7-76 (130)
456 2ffh_A Protein (FFH); SRP54, s 90.1 0.65 2.2E-05 42.2 7.1 106 41-151 98-220 (425)
457 3kjh_A CO dehydrogenase/acetyl 90.1 0.58 2E-05 37.6 6.2 32 47-79 6-39 (254)
458 3qiv_A Short-chain dehydrogena 90.1 0.87 3E-05 37.0 7.3 81 39-122 7-96 (253)
459 3ri6_A O-acetylhomoserine sulf 90.1 4.3 0.00015 36.3 12.5 127 22-156 78-209 (430)
460 1ldn_A L-lactate dehydrogenase 90.0 6.4 0.00022 33.7 13.2 103 40-152 5-125 (316)
461 1xg5_A ARPG836; short chain de 90.0 0.84 2.9E-05 37.8 7.3 80 39-121 30-120 (279)
462 3hv2_A Response regulator/HD d 90.0 2.2 7.4E-05 31.4 9.0 69 67-137 14-83 (153)
463 3ndn_A O-succinylhomoserine su 90.0 9.4 0.00032 33.7 14.6 125 22-155 77-207 (414)
464 3r6d_A NAD-dependent epimerase 89.8 0.91 3.1E-05 36.0 7.1 87 42-137 6-98 (221)
465 1zsy_A Mitochondrial 2-enoyl t 89.8 0.65 2.2E-05 40.3 6.6 97 37-151 164-270 (357)
466 1yb1_A 17-beta-hydroxysteroid 89.7 0.96 3.3E-05 37.5 7.4 80 40-122 30-118 (272)
467 1mld_A Malate dehydrogenase; o 89.7 8.3 0.00028 33.1 13.7 73 43-122 2-78 (314)
468 1xhl_A Short-chain dehydrogena 89.7 1.3 4.5E-05 37.4 8.4 81 39-122 24-116 (297)
469 1hyq_A MIND, cell division inh 89.6 0.3 1E-05 40.1 4.2 29 50-79 12-42 (263)
470 3b1f_A Putative prephenate deh 89.6 1.8 6.2E-05 36.1 9.1 93 40-148 5-98 (290)
471 3imf_A Short chain dehydrogena 89.6 0.88 3E-05 37.4 7.0 80 39-121 4-92 (257)
472 3i83_A 2-dehydropantoate 2-red 89.5 1 3.6E-05 38.5 7.7 97 42-153 3-108 (320)
473 3kto_A Response regulator rece 89.5 1.9 6.6E-05 31.0 8.2 69 67-137 6-77 (136)
474 3kcn_A Adenylate cyclase homol 89.5 3.5 0.00012 30.1 9.8 68 67-137 4-73 (151)
475 3cz5_A Two-component response 89.5 2.7 9.2E-05 30.8 9.1 70 67-137 5-76 (153)
476 3hwr_A 2-dehydropantoate 2-red 89.4 1.5 5E-05 37.7 8.5 94 40-149 18-118 (318)
477 3rc1_A Sugar 3-ketoreductase; 89.4 3.8 0.00013 35.4 11.3 85 40-137 26-112 (350)
478 3cea_A MYO-inositol 2-dehydrog 89.4 3.3 0.00011 35.4 10.8 87 39-136 6-93 (346)
479 3h5n_A MCCB protein; ubiquitin 89.3 4.2 0.00015 35.7 11.6 78 40-122 117-218 (353)
480 2ph1_A Nucleotide-binding prot 89.3 1.7 6E-05 35.7 8.7 39 41-80 18-59 (262)
481 1wma_A Carbonyl reductase [NAD 89.3 0.67 2.3E-05 37.7 6.0 80 40-122 3-92 (276)
482 2c07_A 3-oxoacyl-(acyl-carrier 89.3 2.1 7.3E-05 35.5 9.3 80 40-122 43-131 (285)
483 3lyl_A 3-oxoacyl-(acyl-carrier 89.3 1.4 4.7E-05 35.7 7.9 80 40-122 4-92 (247)
484 2qxy_A Response regulator; reg 89.2 2.9 0.0001 30.0 9.0 68 67-137 4-72 (142)
485 3sju_A Keto reductase; short-c 89.2 1.3 4.6E-05 36.9 8.0 80 40-122 23-111 (279)
486 4a7p_A UDP-glucose dehydrogena 89.2 1.7 5.9E-05 39.6 9.2 106 39-156 6-134 (446)
487 2ae2_A Protein (tropinone redu 89.1 1.4 4.7E-05 36.2 7.9 80 40-122 8-97 (260)
488 3ucx_A Short chain dehydrogena 89.1 1.4 4.8E-05 36.3 8.0 81 38-121 8-97 (264)
489 3a10_A Response regulator; pho 89.1 2.6 8.8E-05 29.1 8.4 67 69-137 3-70 (116)
490 3oig_A Enoyl-[acyl-carrier-pro 89.1 4 0.00014 33.3 10.8 80 40-122 6-97 (266)
491 3jte_A Response regulator rece 89.1 2.8 9.6E-05 30.2 8.9 68 68-137 4-74 (143)
492 3eul_A Possible nitrate/nitrit 89.1 2 7E-05 31.4 8.2 70 67-137 15-86 (152)
493 3lte_A Response regulator; str 89.0 2.9 9.9E-05 29.5 8.8 69 67-137 6-75 (132)
494 3g79_A NDP-N-acetyl-D-galactos 88.9 2.6 8.9E-05 38.8 10.3 106 38-156 15-152 (478)
495 4e7p_A Response regulator; DNA 88.9 3.7 0.00013 30.0 9.5 69 68-137 21-91 (150)
496 2f1k_A Prephenate dehydrogenas 88.8 1.4 4.8E-05 36.5 7.8 87 43-148 2-88 (279)
497 1hyh_A L-hicdh, L-2-hydroxyiso 88.8 8 0.00027 32.8 12.8 73 42-122 2-79 (309)
498 2rhc_B Actinorhodin polyketide 88.8 2.2 7.7E-05 35.4 9.1 80 40-122 21-109 (277)
499 3dhn_A NAD-dependent epimerase 88.8 0.91 3.1E-05 36.0 6.4 72 41-122 4-77 (227)
500 3crn_A Response regulator rece 88.8 2.8 9.4E-05 30.0 8.6 68 68-137 4-72 (132)
No 1
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.96 E-value=8.6e-29 Score=208.64 Aligned_cols=150 Identities=19% Similarity=0.205 Sum_probs=137.2
Q ss_pred CCCCChhHHHHHHHHHhhCCCC---EEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccC-Cc
Q 042616 21 KRGKEPDVGEFISALAAGNNAQ---LIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYA-NC 94 (220)
Q Consensus 21 ~~~~~p~~~~~L~~La~~~~a~---~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~-~~ 94 (220)
-..+.|..+++|..|+...+++ +||||||| +|++|++||.++++ +++|++||.+ +++++.|+++++ ++. ++
T Consensus 34 ~p~i~~~~~~~l~~l~~~~~~~~~~~vLdiG~G-~G~~~~~la~~~~~-~~~v~~vD~~-~~~~~~a~~~~~~~g~~~~~ 110 (221)
T 3dr5_A 34 LPAPDEMTGQLLTTLAATTNGNGSTGAIAITPA-AGLVGLYILNGLAD-NTTLTCIDPE-SEHQRQAKALFREAGYSPSR 110 (221)
T ss_dssp CCCCCHHHHHHHHHHHHHSCCTTCCEEEEESTT-HHHHHHHHHHHSCT-TSEEEEECSC-HHHHHHHHHHHHHTTCCGGG
T ss_pred CCCCCHHHHHHHHHHHHhhCCCCCCCEEEEcCC-chHHHHHHHHhCCC-CCEEEEEECC-HHHHHHHHHHHHHcCCCcCc
Confidence 4678999999999999999998 99999996 99999999999876 8999999999 999999999997 776 78
Q ss_pred EEEEEcchhhhhhhc-CCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCCCCCC----------------
Q 042616 95 IEFVKGDAQKLLMGD-YRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNALPKGS---------------- 157 (220)
Q Consensus 95 Ve~v~gda~~~L~~~-~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~~~g~---------------- 157 (220)
|++++||+.+.++.+ .++||+||+|+++ .+|.++++.+.+. |+| ||+|++||++++|.
T Consensus 111 i~~~~gda~~~l~~~~~~~fD~V~~d~~~--~~~~~~l~~~~~~--Lkp-GG~lv~dn~~~~g~v~~~~~~~~~~~~~~~ 185 (221)
T 3dr5_A 111 VRFLLSRPLDVMSRLANDSYQLVFGQVSP--MDLKALVDAAWPL--LRR-GGALVLADALLDGTIADQTRKDRDTQAARD 185 (221)
T ss_dssp EEEECSCHHHHGGGSCTTCEEEEEECCCT--TTHHHHHHHHHHH--EEE-EEEEEETTTTGGGTCSCSSCCCHHHHHHHH
T ss_pred EEEEEcCHHHHHHHhcCCCcCeEEEcCcH--HHHHHHHHHHHHH--cCC-CcEEEEeCCCCCCcCCCCCCCChHHHHHHH
Confidence 999999999999876 5789999999999 9999999999999 876 99999999998761
Q ss_pred cc-------ceEEEeeecCCcEEEEEEe
Q 042616 158 WR-------GYKTHFLPIGEGLLVTRIG 178 (220)
Q Consensus 158 ~~-------~~~s~~lPig~Gl~v~~~~ 178 (220)
|+ +|+++++|+|+|+.|+++-
T Consensus 186 ~~~~l~~~~~~~~~~lp~gdGl~~~~~~ 213 (221)
T 3dr5_A 186 ADEYIRSIEGAHVARLPLGAGLTVVTKA 213 (221)
T ss_dssp HHHHHTTCTTEEEEEESSTTCEEEEEEC
T ss_pred HHHHHhhCCCeeEEEeeccchHHHHHHH
Confidence 22 7999999999999999986
No 2
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.96 E-value=8.5e-29 Score=211.16 Aligned_cols=163 Identities=17% Similarity=0.173 Sum_probs=136.4
Q ss_pred CCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEE
Q 042616 22 RGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVK 99 (220)
Q Consensus 22 ~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~ 99 (220)
+.+.|..+++|..++...++++||||||| +|++|++||.++++ +++|++||.+ +++++.|+++++ ++.++|++++
T Consensus 42 ~~i~~~~~~~l~~l~~~~~~~~VLDiG~G-~G~~t~~la~~~~~-~~~v~~iD~~-~~~~~~a~~~~~~~g~~~~i~~~~ 118 (242)
T 3r3h_A 42 MQVAPEQAQFMQMLIRLTRAKKVLELGTF-TGYSALAMSLALPD-DGQVITCDIN-EGWTKHAHPYWREAKQEHKIKLRL 118 (242)
T ss_dssp TSCCHHHHHHHHHHHHHHTCSEEEEEESC-CSHHHHHHHHTSCT-TCEEEEEECC-CSSCCCSHHHHHHTTCTTTEEEEE
T ss_pred CccCHHHHHHHHHHHhhcCcCEEEEeeCC-cCHHHHHHHHhCCC-CCEEEEEECC-HHHHHHHHHHHHHcCCCCcEEEEE
Confidence 45889999999999999999999999996 99999999999876 8999999999 999999999997 7777999999
Q ss_pred cchhhhhhhc-----CCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCCCCCC----------------c
Q 042616 100 GDAQKLLMGD-----YRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNALPKGS----------------W 158 (220)
Q Consensus 100 gda~~~L~~~-----~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~~~g~----------------~ 158 (220)
||+.+.++.+ .++||+||+|+++ ..|..+++.+.+. |+| ||+|++||++++|. |
T Consensus 119 gda~~~l~~~~~~~~~~~fD~V~~d~~~--~~~~~~l~~~~~~--Lkp-GG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~ 193 (242)
T 3r3h_A 119 GPALDTLHSLLNEGGEHQFDFIFIDADK--TNYLNYYELALKL--VTP-KGLIAIDNIFWDGKVIDPNDTSGQTREIKKL 193 (242)
T ss_dssp SCHHHHHHHHHHHHCSSCEEEEEEESCG--GGHHHHHHHHHHH--EEE-EEEEEEECSSSSSCSSCTTCCCHHHHHHHHH
T ss_pred cCHHHHHHHHhhccCCCCEeEEEEcCCh--HHhHHHHHHHHHh--cCC-CeEEEEECCccCCcccCccccChHHHHHHHH
Confidence 9999988765 4789999999998 9999999999999 876 99999999998772 2
Q ss_pred c-------ceEEEeeecCCcEEEEEEeecCCCC-CCCcCcCc
Q 042616 159 R-------GYKTHFLPIGEGLLVTRIGENSDVG-GGRKRSRW 192 (220)
Q Consensus 159 ~-------~~~s~~lPig~Gl~v~~~~~~~~~~-~~~~~~~w 192 (220)
. +|+++++|+|+|+.|++++.....- ++--..+|
T Consensus 194 ~~~l~~~~~~~~~~lp~~dG~~~~~k~~~~~~~~~~~~~~~~ 235 (242)
T 3r3h_A 194 NQVIKNDSRVFVSLLAIADGMFLVQPIAENLYFQSHHHHHHW 235 (242)
T ss_dssp HHHHHTCCSEEEEEESSSSCEEEEEEC---------------
T ss_pred HHHHhhCCCEEEEEEEccCceEEEEEcCCCcchhhccccccc
Confidence 2 6999999999999999998654422 33344555
No 3
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.95 E-value=4.8e-27 Score=199.16 Aligned_cols=149 Identities=17% Similarity=0.147 Sum_probs=134.4
Q ss_pred CCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEE
Q 042616 22 RGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVK 99 (220)
Q Consensus 22 ~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~ 99 (220)
+.+.|..+++|..++...++++||||||| +|++|++||.++++ +++|++||.+ +++++.|+++++ ++.++|++++
T Consensus 52 ~~~~~~~~~~l~~l~~~~~~~~VLeiG~G-~G~~~~~la~~~~~-~~~v~~iD~~-~~~~~~a~~~~~~~g~~~~i~~~~ 128 (237)
T 3c3y_A 52 MSTSPLAGQLMSFVLKLVNAKKTIEVGVF-TGYSLLLTALSIPD-DGKITAIDFD-REAYEIGLPFIRKAGVEHKINFIE 128 (237)
T ss_dssp GSCCHHHHHHHHHHHHHTTCCEEEEECCT-TSHHHHHHHHHSCT-TCEEEEEESC-HHHHHHHHHHHHHTTCGGGEEEEE
T ss_pred CCcCHHHHHHHHHHHHhhCCCEEEEeCCC-CCHHHHHHHHhCCC-CCEEEEEECC-HHHHHHHHHHHHHcCCCCcEEEEE
Confidence 45789999999999999999999999996 99999999999876 7999999999 999999999997 7767899999
Q ss_pred cchhhhhhhc------CCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCCCCCC----------------
Q 042616 100 GDAQKLLMGD------YRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNALPKGS---------------- 157 (220)
Q Consensus 100 gda~~~L~~~------~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~~~g~---------------- 157 (220)
||+.+.++.+ .++||+||+|+++ ..|..+++.+.+. |+| ||+|++||++++|.
T Consensus 129 gda~~~l~~l~~~~~~~~~fD~I~~d~~~--~~~~~~l~~~~~~--L~p-GG~lv~d~~~~~g~~~~~~~~~~~~~r~~~ 203 (237)
T 3c3y_A 129 SDAMLALDNLLQGQESEGSYDFGFVDADK--PNYIKYHERLMKL--VKV-GGIVAYDNTLWGGTVAQPESEVPDFMKENR 203 (237)
T ss_dssp SCHHHHHHHHHHSTTCTTCEEEEEECSCG--GGHHHHHHHHHHH--EEE-EEEEEEECTTGGGGGGSCGGGSCGGGHHHH
T ss_pred cCHHHHHHHHHhccCCCCCcCEEEECCch--HHHHHHHHHHHHh--cCC-CeEEEEecCCcCCccCCCcccchhhHHHHH
Confidence 9999988765 4689999999999 9999999999999 876 99999999987651
Q ss_pred -----cc-------ceEEEeeecCCcEEEEEEe
Q 042616 158 -----WR-------GYKTHFLPIGEGLLVTRIG 178 (220)
Q Consensus 158 -----~~-------~~~s~~lPig~Gl~v~~~~ 178 (220)
++ +|.++++|+|+|+.+++++
T Consensus 204 ~~i~~~~~~l~~~~~~~~~~lp~~dG~~~~~~~ 236 (237)
T 3c3y_A 204 EAVIELNKLLAADPRIEIVHLPLGDGITFCRRL 236 (237)
T ss_dssp HHHHHHHHHHHHCTTEEEEEECSTTCEEEEEEC
T ss_pred HHHHHHHHHHhcCCCeEEEEEEeCCceEEEEEc
Confidence 11 7999999999999999986
No 4
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.95 E-value=5.2e-27 Score=200.62 Aligned_cols=149 Identities=22% Similarity=0.238 Sum_probs=134.5
Q ss_pred CCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEE
Q 042616 22 RGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVK 99 (220)
Q Consensus 22 ~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~ 99 (220)
+.+.|..+++|..++...++++||||||| +|++|++||.++++ +++|++||.+ +++++.|+++++ ++.++|++++
T Consensus 61 ~~~~~~~~~ll~~l~~~~~~~~VLeiG~G-~G~~~~~la~~~~~-~~~v~~iD~s-~~~~~~a~~~~~~~g~~~~i~~~~ 137 (247)
T 1sui_A 61 MTTSADEGQFLSMLLKLINAKNTMEIGVY-TGYSLLATALAIPE-DGKILAMDIN-KENYELGLPVIKKAGVDHKIDFRE 137 (247)
T ss_dssp GSCCHHHHHHHHHHHHHTTCCEEEEECCG-GGHHHHHHHHHSCT-TCEEEEEESC-CHHHHHHHHHHHHTTCGGGEEEEE
T ss_pred CCcCHHHHHHHHHHHHhhCcCEEEEeCCC-cCHHHHHHHHhCCC-CCEEEEEECC-HHHHHHHHHHHHHcCCCCCeEEEE
Confidence 56789999999999999999999999996 99999999999876 7999999999 999999999997 6767899999
Q ss_pred cchhhhhhhc------CCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCCCCCC----------------
Q 042616 100 GDAQKLLMGD------YRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNALPKGS---------------- 157 (220)
Q Consensus 100 gda~~~L~~~------~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~~~g~---------------- 157 (220)
||+.+.++.+ .++||+||+|+++ .+|..+++.+.+. |+| ||+|++||++++|.
T Consensus 138 gda~~~l~~l~~~~~~~~~fD~V~~d~~~--~~~~~~l~~~~~~--Lkp-GG~lv~d~~~~~g~v~~~~~~~~~~~~~~~ 212 (247)
T 1sui_A 138 GPALPVLDEMIKDEKNHGSYDFIFVDADK--DNYLNYHKRLIDL--VKV-GGVIGYDNTLWNGSVVAPPDAPLRKYVRYY 212 (247)
T ss_dssp SCHHHHHHHHHHSGGGTTCBSEEEECSCS--TTHHHHHHHHHHH--BCT-TCCEEEECTTGGGGGGCCTTSCCCHHHHHH
T ss_pred CCHHHHHHHHHhccCCCCCEEEEEEcCch--HHHHHHHHHHHHh--CCC-CeEEEEecCCcCCcccCCCccchhhhhhHH
Confidence 9999988765 4789999999999 8999999999999 876 99999999998761
Q ss_pred ------cc-------ceEEEeeecCCcEEEEEEe
Q 042616 158 ------WR-------GYKTHFLPIGEGLLVTRIG 178 (220)
Q Consensus 158 ------~~-------~~~s~~lPig~Gl~v~~~~ 178 (220)
++ +|.++++|+|+|+.+++|+
T Consensus 213 ~~~i~~~~~~l~~~~~~~~~~lp~~dG~~l~~k~ 246 (247)
T 1sui_A 213 RDFVLELNKALAVDPRIEICMLPVGDGITICRRI 246 (247)
T ss_dssp HHHHHHHHHHHHTCTTBCCEEECSTTCEEEECBC
T ss_pred HHHHHHHHHHHhhCCCeEEEEEecCCccEEEEEc
Confidence 11 6899999999999999875
No 5
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.93 E-value=1.8e-25 Score=185.69 Aligned_cols=149 Identities=16% Similarity=0.201 Sum_probs=134.5
Q ss_pred CCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEE
Q 042616 22 RGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVK 99 (220)
Q Consensus 22 ~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~ 99 (220)
+.+.|..+++|..++...++++||||||| +|++|++|+.++++ +++|+++|.+ +++++.|+++++ ++.++|++++
T Consensus 46 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G-~G~~~~~la~~~~~-~~~v~~vD~~-~~~~~~a~~~~~~~~~~~~v~~~~ 122 (225)
T 3tr6_A 46 MQTAPEQAQLLALLVKLMQAKKVIDIGTF-TGYSAIAMGLALPK-DGTLITCDVD-EKSTALAKEYWEKAGLSDKIGLRL 122 (225)
T ss_dssp GSCCHHHHHHHHHHHHHHTCSEEEEECCT-TSHHHHHHHTTCCT-TCEEEEEESC-HHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred cccCHHHHHHHHHHHHhhCCCEEEEeCCc-chHHHHHHHHhCCC-CCEEEEEeCC-HHHHHHHHHHHHHCCCCCceEEEe
Confidence 56889999999999999999999999997 99999999998775 7999999999 999999999997 7767899999
Q ss_pred cchhhhhhhcC-----CCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCCCCCC----------------c
Q 042616 100 GDAQKLLMGDY-----RGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNALPKGS----------------W 158 (220)
Q Consensus 100 gda~~~L~~~~-----~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~~~g~----------------~ 158 (220)
+|+.+.++.+. ++||+||+|+++ ..+..+++.+.+. |+| ||++++||++++|. |
T Consensus 123 ~d~~~~~~~~~~~~~~~~fD~v~~~~~~--~~~~~~l~~~~~~--L~p-gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~ 197 (225)
T 3tr6_A 123 SPAKDTLAELIHAGQAWQYDLIYIDADK--ANTDLYYEESLKL--LRE-GGLIAVDNVLRRGQVADEENQSENNQLIRLF 197 (225)
T ss_dssp SCHHHHHHHHHTTTCTTCEEEEEECSCG--GGHHHHHHHHHHH--EEE-EEEEEEECSSGGGGGGCTTCCCHHHHHHHHH
T ss_pred CCHHHHHHHhhhccCCCCccEEEECCCH--HHHHHHHHHHHHh--cCC-CcEEEEeCCCcCCcccCccccChHHHHHHHH
Confidence 99998887653 789999999998 8999999999998 876 99999999998762 1
Q ss_pred c-------ceEEEeeecCCcEEEEEEe
Q 042616 159 R-------GYKTHFLPIGEGLLVTRIG 178 (220)
Q Consensus 159 ~-------~~~s~~lPig~Gl~v~~~~ 178 (220)
. +|.++++|+|+|+.|++|+
T Consensus 198 ~~~l~~~~~~~~~~lp~~dG~~~~~k~ 224 (225)
T 3tr6_A 198 NQKVYKDERVDMILIPIGDGLTLARKK 224 (225)
T ss_dssp HHHHHHCTTEEEEEECSTTCEEEEEEC
T ss_pred HHHHhcCCCeEEEEEEcCCccEEEEEC
Confidence 1 6999999999999999986
No 6
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.93 E-value=1.1e-25 Score=189.73 Aligned_cols=148 Identities=17% Similarity=0.201 Sum_probs=132.7
Q ss_pred CCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEc
Q 042616 23 GKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKG 100 (220)
Q Consensus 23 ~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~g 100 (220)
.+.|..+++|..++...++++||||||| +|++|++|+.++++ +++|++||.+ +++++.|+++++ ++.++|+++++
T Consensus 55 ~~~~~~~~~l~~l~~~~~~~~vLdiG~G-~G~~~~~la~~~~~-~~~v~~iD~~-~~~~~~a~~~~~~~g~~~~i~~~~~ 131 (232)
T 3cbg_A 55 QISPEQAQFLGLLISLTGAKQVLEIGVF-RGYSALAMALQLPP-DGQIIACDQD-PNATAIAKKYWQKAGVAEKISLRLG 131 (232)
T ss_dssp SCCHHHHHHHHHHHHHHTCCEEEEECCT-TSHHHHHHHTTSCT-TCEEEEEESC-HHHHHHHHHHHHHHTCGGGEEEEES
T ss_pred CcCHHHHHHHHHHHHhcCCCEEEEecCC-CCHHHHHHHHhCCC-CCEEEEEECC-HHHHHHHHHHHHHcCCCCcEEEEEc
Confidence 6789999999999999999999999997 99999999998876 7899999999 999999999997 66678999999
Q ss_pred chhhhhhhc---C--CCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCCCCCC----------------cc
Q 042616 101 DAQKLLMGD---Y--RGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNALPKGS----------------WR 159 (220)
Q Consensus 101 da~~~L~~~---~--~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~~~g~----------------~~ 159 (220)
|+.+.++.+ . ++||+||+|+++ .+|..+++.+.+. |+| ||+|++||++++|. |+
T Consensus 132 d~~~~l~~l~~~~~~~~fD~V~~d~~~--~~~~~~l~~~~~~--Lkp-gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~ 206 (232)
T 3cbg_A 132 PALATLEQLTQGKPLPEFDLIFIDADK--RNYPRYYEIGLNL--LRR-GGLMVIDNVLWHGKVTEVDPQEAQTQVLQQFN 206 (232)
T ss_dssp CHHHHHHHHHTSSSCCCEEEEEECSCG--GGHHHHHHHHHHT--EEE-EEEEEEECTTGGGGGGCSSCCSHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCCCcCEEEECCCH--HHHHHHHHHHHHH--cCC-CeEEEEeCCCcCCccCCcccCChHHHHHHHHH
Confidence 999887654 1 689999999998 9999999999998 876 99999999998751 21
Q ss_pred -------ceEEEeeecCCcEEEEEEe
Q 042616 160 -------GYKTHFLPIGEGLLVTRIG 178 (220)
Q Consensus 160 -------~~~s~~lPig~Gl~v~~~~ 178 (220)
++.++++|+++|+.+++++
T Consensus 207 ~~l~~~~~~~~~~lp~~dG~~~~~~~ 232 (232)
T 3cbg_A 207 RDLAQDERVRISVIPLGDGMTLALKK 232 (232)
T ss_dssp HHHTTCTTEEEEEECSBTCEEEEEEC
T ss_pred HHHhhCCCeEEEEEEcCCeEEEEEeC
Confidence 6999999999999999874
No 7
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.93 E-value=2.8e-25 Score=187.15 Aligned_cols=148 Identities=21% Similarity=0.285 Sum_probs=133.6
Q ss_pred CCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEE
Q 042616 22 RGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVK 99 (220)
Q Consensus 22 ~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~ 99 (220)
..+.|..+++|..++...++++||||||| +|++|++||.+.+ +++|++||.+ +++++.|+++++ ++.++|++++
T Consensus 53 ~~~~~~~~~~l~~~~~~~~~~~vLDiG~G-~G~~~~~la~~~~--~~~v~~vD~~-~~~~~~a~~~~~~~~~~~~v~~~~ 128 (232)
T 3ntv_A 53 PIVDRLTLDLIKQLIRMNNVKNILEIGTA-IGYSSMQFASISD--DIHVTTIERN-ETMIQYAKQNLATYHFENQVRIIE 128 (232)
T ss_dssp CCCCHHHHHHHHHHHHHHTCCEEEEECCS-SSHHHHHHHTTCT--TCEEEEEECC-HHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred CCcCHHHHHHHHHHHhhcCCCEEEEEeCc-hhHHHHHHHHhCC--CCEEEEEECC-HHHHHHHHHHHHHcCCCCcEEEEE
Confidence 56789999999999999999999999997 9999999998544 7999999999 999999999997 6767899999
Q ss_pred cchhhhhh-hcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCCCCCC---------------------
Q 042616 100 GDAQKLLM-GDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNALPKGS--------------------- 157 (220)
Q Consensus 100 gda~~~L~-~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~~~g~--------------------- 157 (220)
+|+.+.++ .+.++||+||+|++. ..|.++++.+.+. |+| ||++++||++++|.
T Consensus 129 ~d~~~~~~~~~~~~fD~V~~~~~~--~~~~~~l~~~~~~--Lkp-gG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~~ 203 (232)
T 3ntv_A 129 GNALEQFENVNDKVYDMIFIDAAK--AQSKKFFEIYTPL--LKH-QGLVITDNVLYHGFVSDIGIVRSRNVRQMVKKVQD 203 (232)
T ss_dssp SCGGGCHHHHTTSCEEEEEEETTS--SSHHHHHHHHGGG--EEE-EEEEEEECTTGGGGGGCGGGGGCHHHHHHHHHHHH
T ss_pred CCHHHHHHhhccCCccEEEEcCcH--HHHHHHHHHHHHh--cCC-CeEEEEeeCCcCccccCcccccchhhhHHHHHHHH
Confidence 99999888 666889999999999 9999999999998 876 99999999998762
Q ss_pred cc-------ceEEEeeecCCcEEEEEEe
Q 042616 158 WR-------GYKTHFLPIGEGLLVTRIG 178 (220)
Q Consensus 158 ~~-------~~~s~~lPig~Gl~v~~~~ 178 (220)
|. +|.++++|+|+|+.|++|+
T Consensus 204 ~~~~l~~~~~~~~~~lp~~dG~~i~~k~ 231 (232)
T 3ntv_A 204 YNEWLIKQPGYTTNFLNIDDGLAISIKG 231 (232)
T ss_dssp HHHHHHTCTTEEEEEECSTTCEEEEEEC
T ss_pred HHHHHhcCCCeEEEEEEcCCceEEEEEC
Confidence 11 6999999999999999986
No 8
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.93 E-value=3.8e-25 Score=184.41 Aligned_cols=152 Identities=13% Similarity=0.132 Sum_probs=132.8
Q ss_pred CCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEE
Q 042616 22 RGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVK 99 (220)
Q Consensus 22 ~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~ 99 (220)
+.+.|..+++|..++...++++||||||| +|++|++||.++++ +++|++||.+ +.+++.|+++++ ++.++|++++
T Consensus 40 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G-~G~~~~~la~~~~~-~~~v~~vD~~-~~~~~~a~~~~~~~~~~~~v~~~~ 116 (221)
T 3u81_A 40 MNVGDAKGQIMDAVIREYSPSLVLELGAY-CGYSAVRMARLLQP-GARLLTMEIN-PDCAAITQQMLNFAGLQDKVTILN 116 (221)
T ss_dssp GGCCHHHHHHHHHHHHHHCCSEEEEECCT-TSHHHHHHHTTSCT-TCEEEEEESC-HHHHHHHHHHHHHHTCGGGEEEEE
T ss_pred cccCHHHHHHHHHHHHhcCCCEEEEECCC-CCHHHHHHHHhCCC-CCEEEEEeCC-hHHHHHHHHHHHHcCCCCceEEEE
Confidence 57899999999999999999999999997 99999999998765 7999999999 999999999997 7767899999
Q ss_pred cchhhhhhhcC-----CCccEEEEcCCCCCccHHHHHHHHH--hhcCCCCCCEEEEEecCCCCCC--cc-------ceEE
Q 042616 100 GDAQKLLMGDY-----RGADFVLIDCNIDIDGHKNVFRAAK--ESVMHGSGAGVIVGYNALPKGS--WR-------GYKT 163 (220)
Q Consensus 100 gda~~~L~~~~-----~~~D~VfiD~~k~~~~y~~~l~~l~--~~~~L~~~Ggviv~dNv~~~g~--~~-------~~~s 163 (220)
+|+.+.++.+. ++||+||+|+.. ..|.++++.+. +. |+| ||+++++|+.+++. |. +|.+
T Consensus 117 ~d~~~~l~~~~~~~~~~~fD~V~~d~~~--~~~~~~~~~~~~~~~--Lkp-gG~lv~~~~~~~~~~~~~~~l~~~~~~~~ 191 (221)
T 3u81_A 117 GASQDLIPQLKKKYDVDTLDMVFLDHWK--DRYLPDTLLLEKCGL--LRK-GTVLLADNVIVPGTPDFLAYVRGSSSFEC 191 (221)
T ss_dssp SCHHHHGGGTTTTSCCCCCSEEEECSCG--GGHHHHHHHHHHTTC--CCT-TCEEEESCCCCCCCHHHHHHHHHCTTEEE
T ss_pred CCHHHHHHHHHHhcCCCceEEEEEcCCc--ccchHHHHHHHhccc--cCC-CeEEEEeCCCCcchHHHHHHHhhCCCceE
Confidence 99999887764 689999999998 88877665554 55 765 99999999998872 21 6999
Q ss_pred Eeee-------cCCcEEEEEEeecC
Q 042616 164 HFLP-------IGEGLLVTRIGENS 181 (220)
Q Consensus 164 ~~lP-------ig~Gl~v~~~~~~~ 181 (220)
+++| +++|+.+++++..|
T Consensus 192 ~~~~~~~~~~~~~dG~~~~~~~g~~ 216 (221)
T 3u81_A 192 THYSSYLEYMKVVDGLEKAIYQGPS 216 (221)
T ss_dssp EEEEEEETTTTEEEEEEEEEECCCC
T ss_pred EEcccccccCCCCCceEEEEEeCCC
Confidence 9999 89999999998543
No 9
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.93 E-value=1.2e-24 Score=185.48 Aligned_cols=151 Identities=15% Similarity=0.242 Sum_probs=133.7
Q ss_pred CCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEc
Q 042616 23 GKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKG 100 (220)
Q Consensus 23 ~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~g 100 (220)
.+.|..+++|..++...++++||||||| +|++|++||.++++ +++|++||.+ +++++.|+++++ ++.++|+++++
T Consensus 46 ~~~~~~~~~l~~l~~~~~~~~VLdiG~G-~G~~~~~la~~~~~-~~~v~~vD~s-~~~~~~a~~~~~~~g~~~~v~~~~~ 122 (248)
T 3tfw_A 46 DVAANQGQFLALLVRLTQAKRILEIGTL-GGYSTIWMARELPA-DGQLLTLEAD-AHHAQVARENLQLAGVDQRVTLREG 122 (248)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEECCT-TSHHHHHHHTTSCT-TCEEEEEECC-HHHHHHHHHHHHHTTCTTTEEEEES
T ss_pred ccCHHHHHHHHHHHhhcCCCEEEEecCC-chHHHHHHHHhCCC-CCEEEEEECC-HHHHHHHHHHHHHcCCCCcEEEEEc
Confidence 4679999999999999999999999997 99999999998875 7999999999 999999999997 77778999999
Q ss_pred chhhhhhhcCC--CccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCCCCCC----------------cc---
Q 042616 101 DAQKLLMGDYR--GADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNALPKGS----------------WR--- 159 (220)
Q Consensus 101 da~~~L~~~~~--~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~~~g~----------------~~--- 159 (220)
|+.+.++.+.+ +||+||+|+++ ..|..+++.+.+. |+| ||+|++||+++.|. |.
T Consensus 123 d~~~~l~~~~~~~~fD~V~~d~~~--~~~~~~l~~~~~~--Lkp-GG~lv~~~~~~~g~v~~~~~~~~~~~~~~~~~~~l 197 (248)
T 3tfw_A 123 PALQSLESLGECPAFDLIFIDADK--PNNPHYLRWALRY--SRP-GTLIIGDNVVRDGEVVNPQSADERVQGVRQFIEMM 197 (248)
T ss_dssp CHHHHHHTCCSCCCCSEEEECSCG--GGHHHHHHHHHHT--CCT-TCEEEEECCSGGGGGGCTTCCCHHHHHHHHHHHHH
T ss_pred CHHHHHHhcCCCCCeEEEEECCch--HHHHHHHHHHHHh--cCC-CeEEEEeCCCcCCcccCccccchHHHHHHHHHHHH
Confidence 99998887643 89999999998 9999999999998 876 99999999998751 21
Q ss_pred ----ceEEEee-ecC----CcEEEEEEeecC
Q 042616 160 ----GYKTHFL-PIG----EGLLVTRIGENS 181 (220)
Q Consensus 160 ----~~~s~~l-Pig----~Gl~v~~~~~~~ 181 (220)
+|.++++ |+| ||+.|++++.+.
T Consensus 198 ~~~~~~~~~~l~~~g~~~~DG~~i~~~~~~~ 228 (248)
T 3tfw_A 198 GAEPRLTATALQTVGTKGWDGFTLAWVNAAE 228 (248)
T ss_dssp HHCTTEEEEEEEECSTTCSEEEEEEEECCC-
T ss_pred hhCCCEEEEEeecCCCCCCCeeEEEEEeCCc
Confidence 6888887 777 999999998543
No 10
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.93 E-value=6.1e-25 Score=182.88 Aligned_cols=149 Identities=16% Similarity=0.130 Sum_probs=133.3
Q ss_pred CCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEE
Q 042616 22 RGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVK 99 (220)
Q Consensus 22 ~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~ 99 (220)
+.+.|..+++|..++...++++||||||| +|+++++|+.++++ +++|+++|.+ +.+++.|+++++ ++.+++++++
T Consensus 51 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G-~G~~~~~la~~~~~-~~~v~~vD~~-~~~~~~a~~~~~~~g~~~~i~~~~ 127 (229)
T 2avd_A 51 SMMTCEQAQLLANLARLIQAKKALDLGTF-TGYSALALALALPA-DGRVVTCEVD-AQPPELGRPLWRQAEAEHKIDLRL 127 (229)
T ss_dssp GSCCHHHHHHHHHHHHHTTCCEEEEECCT-TSHHHHHHHTTSCT-TCEEEEEESC-SHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred CccCHHHHHHHHHHHHhcCCCEEEEEcCC-ccHHHHHHHHhCCC-CCEEEEEECC-HHHHHHHHHHHHHCCCCCeEEEEE
Confidence 57899999999999999999999999997 99999999998765 7899999999 999999999997 6667899999
Q ss_pred cchhhhhhhcC-----CCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCCCCCC----------------c
Q 042616 100 GDAQKLLMGDY-----RGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNALPKGS----------------W 158 (220)
Q Consensus 100 gda~~~L~~~~-----~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~~~g~----------------~ 158 (220)
+|+.+.++.+. ++||+||+|+++ ..|..+++.+.+. |+| ||+++++|++++|. |
T Consensus 128 ~d~~~~~~~~~~~~~~~~~D~v~~d~~~--~~~~~~l~~~~~~--L~p-gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~ 202 (229)
T 2avd_A 128 KPALETLDELLAAGEAGTFDVAVVDADK--ENCSAYYERCLQL--LRP-GGILAVLRVLWRGKVLQPPKGDVAAECVRNL 202 (229)
T ss_dssp SCHHHHHHHHHHTTCTTCEEEEEECSCS--TTHHHHHHHHHHH--EEE-EEEEEEECCSGGGGGGSCCTTCHHHHHHHHH
T ss_pred cCHHHHHHHHHhcCCCCCccEEEECCCH--HHHHHHHHHHHHH--cCC-CeEEEEECCCcCCcccCcccCChHHHHHHHH
Confidence 99998876542 689999999998 9999999999998 876 99999999997651 1
Q ss_pred c-------ceEEEeeecCCcEEEEEEe
Q 042616 159 R-------GYKTHFLPIGEGLLVTRIG 178 (220)
Q Consensus 159 ~-------~~~s~~lPig~Gl~v~~~~ 178 (220)
. ++.++++|+|+|+.|+++.
T Consensus 203 ~~~l~~~~~~~~~~lp~~dGl~~~~k~ 229 (229)
T 2avd_A 203 NERIRRDVRVYISLLPLGDGLTLAFKI 229 (229)
T ss_dssp HHHHHHCTTEEEEEECSTTCEEEEEEC
T ss_pred HHHHhhCCCEEEEEEecCCceEEEEEC
Confidence 1 6999999999999999874
No 11
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.93 E-value=1.1e-24 Score=181.01 Aligned_cols=149 Identities=21% Similarity=0.277 Sum_probs=133.0
Q ss_pred CCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEE
Q 042616 22 RGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVK 99 (220)
Q Consensus 22 ~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~ 99 (220)
+.+.|..+++|..++...++++||||||| +|++|++||.++++ +++|+++|.+ +++++.|+++++ ++.++|++++
T Consensus 40 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G-~G~~~~~la~~~~~-~~~v~~vD~~-~~~~~~a~~~~~~~~~~~~v~~~~ 116 (223)
T 3duw_A 40 HDVSPTQGKFLQLLVQIQGARNILEIGTL-GGYSTIWLARGLSS-GGRVVTLEAS-EKHADIARSNIERANLNDRVEVRT 116 (223)
T ss_dssp CSCCHHHHHHHHHHHHHHTCSEEEEECCT-TSHHHHHHHTTCCS-SCEEEEEESC-HHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred cccCHHHHHHHHHHHHhhCCCEEEEecCC-ccHHHHHHHHhCCC-CCEEEEEECC-HHHHHHHHHHHHHcCCCCcEEEEE
Confidence 34679999999999999999999999997 99999999998875 7899999999 999999999997 7777899999
Q ss_pred cchhhhhhhcC----CCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCCCCCC----------------cc
Q 042616 100 GDAQKLLMGDY----RGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNALPKGS----------------WR 159 (220)
Q Consensus 100 gda~~~L~~~~----~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~~~g~----------------~~ 159 (220)
+|+.+.++.+. ++||+||+|+.. ..+..+++.+.+. |+| ||++++||++++|. |.
T Consensus 117 ~d~~~~~~~~~~~~~~~fD~v~~d~~~--~~~~~~l~~~~~~--L~p-gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~ 191 (223)
T 3duw_A 117 GLALDSLQQIENEKYEPFDFIFIDADK--QNNPAYFEWALKL--SRP-GTVIIGDNVVREGEVIDNTSNDPRVQGIRRFY 191 (223)
T ss_dssp SCHHHHHHHHHHTTCCCCSEEEECSCG--GGHHHHHHHHHHT--CCT-TCEEEEESCSGGGGGGCTTCCCHHHHHHHHHH
T ss_pred cCHHHHHHHHHhcCCCCcCEEEEcCCc--HHHHHHHHHHHHh--cCC-CcEEEEeCCCcCCcccCccccchHHHHHHHHH
Confidence 99998876542 579999999998 9999999999998 876 99999999998751 21
Q ss_pred -------ceEEEeeec-----CCcEEEEEEe
Q 042616 160 -------GYKTHFLPI-----GEGLLVTRIG 178 (220)
Q Consensus 160 -------~~~s~~lPi-----g~Gl~v~~~~ 178 (220)
+|.++++|+ |+|+.+++++
T Consensus 192 ~~l~~~~~~~~~~~p~~~~~~~dG~~~~~~~ 222 (223)
T 3duw_A 192 ELIAAEPRVSATALQTVGSKGYDGFIMAVVK 222 (223)
T ss_dssp HHHHHCTTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred HHHhhCCCeEEEEEeccCCCCCCeeEEEEEe
Confidence 699999999 9999999986
No 12
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.92 E-value=5.1e-24 Score=175.82 Aligned_cols=148 Identities=20% Similarity=0.346 Sum_probs=132.7
Q ss_pred CCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEE
Q 042616 22 RGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVK 99 (220)
Q Consensus 22 ~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~ 99 (220)
+.+.|..++++..++...++++||||||| +|++|++|+.++++ +++|++||.+ +++++.|+++++ ++.++|++++
T Consensus 38 p~~~~~~~~~l~~l~~~~~~~~vLdiG~G-~G~~~~~la~~~~~-~~~v~~vD~~-~~~~~~a~~~~~~~~~~~~v~~~~ 114 (210)
T 3c3p_A 38 PIVDRQTGRLLYLLARIKQPQLVVVPGDG-LGCASWWFARAISI-SSRVVMIDPD-RDNVEHARRMLHDNGLIDRVELQV 114 (210)
T ss_dssp CCCCHHHHHHHHHHHHHHCCSEEEEESCG-GGHHHHHHHTTSCT-TCEEEEEESC-HHHHHHHHHHHHHHSGGGGEEEEE
T ss_pred CCcCHHHHHHHHHHHHhhCCCEEEEEcCC-ccHHHHHHHHhCCC-CCEEEEEECC-HHHHHHHHHHHHHCCCCceEEEEE
Confidence 57899999999999998899999999996 99999999998775 7999999999 999999999997 6667899999
Q ss_pred cchhhhhhhcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCCCCCC---------------cc-----
Q 042616 100 GDAQKLLMGDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNALPKGS---------------WR----- 159 (220)
Q Consensus 100 gda~~~L~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~~~g~---------------~~----- 159 (220)
+|+.+.++...+ ||+||+|+.+ ..+..+++.+.+. |+| ||+++++|+++.|. |.
T Consensus 115 ~d~~~~~~~~~~-fD~v~~~~~~--~~~~~~l~~~~~~--Lkp-gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~ 188 (210)
T 3c3p_A 115 GDPLGIAAGQRD-IDILFMDCDV--FNGADVLERMNRC--LAK-NALLIAVNALRRGSVAESHEDPETAALREFNHHLSR 188 (210)
T ss_dssp SCHHHHHTTCCS-EEEEEEETTT--SCHHHHHHHHGGG--EEE-EEEEEEESSSSCC------------CCCHHHHHHTT
T ss_pred ecHHHHhccCCC-CCEEEEcCCh--hhhHHHHHHHHHh--cCC-CeEEEEECccccCcccCcccchHHHHHHHHHHHHhh
Confidence 999998876556 9999999998 8999999999998 876 99999999988641 11
Q ss_pred --ceEEEeeecCCcEEEEEEe
Q 042616 160 --GYKTHFLPIGEGLLVTRIG 178 (220)
Q Consensus 160 --~~~s~~lPig~Gl~v~~~~ 178 (220)
++.++++|+++|+.+++|+
T Consensus 189 ~~~~~~~~~p~~~G~~~~~~~ 209 (210)
T 3c3p_A 189 RRDFFTTIVPVGNGVLLGYRL 209 (210)
T ss_dssp CTTEEEEEECSTTCEEEEEEC
T ss_pred CCCeEEEEEecCCceEEEEeC
Confidence 5899999999999999986
No 13
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.90 E-value=8.7e-23 Score=171.99 Aligned_cols=150 Identities=19% Similarity=0.249 Sum_probs=133.0
Q ss_pred CCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEE
Q 042616 22 RGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVK 99 (220)
Q Consensus 22 ~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~ 99 (220)
+.+.|..+++|..++...++++||||||| +|+++++|+...++ +++|+++|.+ ++.++.|+++++ ++.++|++++
T Consensus 42 ~~~~~~~~~~l~~l~~~~~~~~VLdiG~G-~G~~~~~la~~~~~-~~~v~~vD~~-~~~~~~a~~~~~~~g~~~~v~~~~ 118 (239)
T 2hnk_A 42 MQISPEEGQFLNILTKISGAKRIIEIGTF-TGYSSLCFASALPE-DGKILCCDVS-EEWTNVARKYWKENGLENKIFLKL 118 (239)
T ss_dssp CSCCHHHHHHHHHHHHHHTCSEEEEECCT-TCHHHHHHHHHSCT-TCEEEEEESC-HHHHHHHHHHHHHTTCGGGEEEEE
T ss_pred cccCHHHHHHHHHHHHhhCcCEEEEEeCC-CCHHHHHHHHhCCC-CCEEEEEECC-HHHHHHHHHHHHHcCCCCCEEEEE
Confidence 47899999999999999999999999997 99999999998765 7899999999 999999999996 6656799999
Q ss_pred cchhhhhhhc---------------C-CCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCCCCCC------
Q 042616 100 GDAQKLLMGD---------------Y-RGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNALPKGS------ 157 (220)
Q Consensus 100 gda~~~L~~~---------------~-~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~~~g~------ 157 (220)
+|+.+.++.+ . ++||+||+|+.. ..+..+++.+.+. |+| ||+++++|++++|.
T Consensus 119 ~d~~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~--~~~~~~l~~~~~~--L~p-gG~lv~~~~~~~g~~~~~~~ 193 (239)
T 2hnk_A 119 GSALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADK--ENYPNYYPLILKL--LKP-GGLLIADNVLWDGSVADLSH 193 (239)
T ss_dssp SCHHHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCG--GGHHHHHHHHHHH--EEE-EEEEEEECSSGGGGGGCTTC
T ss_pred CCHHHHHHHHHhhcccccccccccCCCCCcCEEEEeCCH--HHHHHHHHHHHHH--cCC-CeEEEEEccccCCcccCccc
Confidence 9999877643 2 689999999988 8999999999999 876 99999999988651
Q ss_pred ----------cc-------ceEEEeeecCCcEEEEEEee
Q 042616 158 ----------WR-------GYKTHFLPIGEGLLVTRIGE 179 (220)
Q Consensus 158 ----------~~-------~~~s~~lPig~Gl~v~~~~~ 179 (220)
|. +|.++++|+++|+.+++++.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~ 232 (239)
T 2hnk_A 194 QEPSTVGIRKFNELVYNDSLVDVSLVPIADGVSLVRKRL 232 (239)
T ss_dssp CCHHHHHHHHHHHHHHHCTTEEEEEECSTTCEEEEEECC
T ss_pred cchHHHHHHHHHHHHhhCCCeEEEEEEcCCceEeeeehh
Confidence 11 69999999999999999874
No 14
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.88 E-value=1.2e-21 Score=164.07 Aligned_cols=151 Identities=19% Similarity=0.195 Sum_probs=131.6
Q ss_pred CCCCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEE
Q 042616 20 GKRGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEF 97 (220)
Q Consensus 20 ~~~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~ 97 (220)
+..++.|..++++..++...++++||||||| +|+++++|+...+ +++|+++|.+ +.+++.|+++++ ++.++|++
T Consensus 34 ~~~~~~~~~~~~l~~~~~~~~~~~vLdiG~G-~G~~~~~la~~~~--~~~v~~vD~~-~~~~~~a~~~~~~~~~~~~v~~ 109 (233)
T 2gpy_A 34 QVPIMDLLGMESLLHLLKMAAPARILEIGTA-IGYSAIRMAQALP--EATIVSIERD-ERRYEEAHKHVKALGLESRIEL 109 (233)
T ss_dssp TCCCCCHHHHHHHHHHHHHHCCSEEEEECCT-TSHHHHHHHHHCT--TCEEEEECCC-HHHHHHHHHHHHHTTCTTTEEE
T ss_pred CCCCcCHHHHHHHHHHHhccCCCEEEEecCC-CcHHHHHHHHHCC--CCEEEEEECC-HHHHHHHHHHHHHcCCCCcEEE
Confidence 3467899999999999999999999999997 9999999999875 6899999999 999999999997 66678999
Q ss_pred EEcchhhhhhhc--CCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCCCCCC------------------
Q 042616 98 VKGDAQKLLMGD--YRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNALPKGS------------------ 157 (220)
Q Consensus 98 v~gda~~~L~~~--~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~~~g~------------------ 157 (220)
+++|+.+.++.. .++||+||+|+.. ..+..+++.+.+. |+| ||+++++|+++.|.
T Consensus 110 ~~~d~~~~~~~~~~~~~fD~I~~~~~~--~~~~~~l~~~~~~--L~p-gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~ 184 (233)
T 2gpy_A 110 LFGDALQLGEKLELYPLFDVLFIDAAK--GQYRRFFDMYSPM--VRP-GGLILSDNVLFRGLVAETDIEHKRHKQLATKI 184 (233)
T ss_dssp ECSCGGGSHHHHTTSCCEEEEEEEGGG--SCHHHHHHHHGGG--EEE-EEEEEEETTTC---------------------
T ss_pred EECCHHHHHHhcccCCCccEEEECCCH--HHHHHHHHHHHHH--cCC-CeEEEEEcCCcCCccCCccccccchhHHHHHH
Confidence 999999877765 4689999999998 8999999999998 876 99999999987651
Q ss_pred --c---c----ceEEEeeecCCcEEEEEEee
Q 042616 158 --W---R----GYKTHFLPIGEGLLVTRIGE 179 (220)
Q Consensus 158 --~---~----~~~s~~lPig~Gl~v~~~~~ 179 (220)
| . +|.++++|+++|+.+++++.
T Consensus 185 ~~~~~~l~~~~~~~~~~~p~~dG~~~~~~~~ 215 (233)
T 2gpy_A 185 DTYNQWLLEHPQYDTRIFPVGDGIAISIKRE 215 (233)
T ss_dssp ----CTTTTCTTEEEEEECSTTCEEEEEEC-
T ss_pred HHHHHHHHhCCCeEEEEEEcCCeEEEEEEcC
Confidence 1 1 68999999999999999874
No 15
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.87 E-value=1.4e-21 Score=163.62 Aligned_cols=122 Identities=17% Similarity=0.036 Sum_probs=101.3
Q ss_pred CCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--cc--CCcEEE
Q 042616 22 RGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RY--ANCIEF 97 (220)
Q Consensus 22 ~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~--~~~Ve~ 97 (220)
.++.|++++||.. ...++++|||||| ||||+|||+. . +|+|+|||.| ++.++.|+++++ ++ .++|++
T Consensus 14 ~~v~~~~~~~L~~--~l~~a~~VLEiGt---GySTl~lA~~--~-~g~VvtvE~d-~~~~~~ar~~l~~~g~~~~~~I~~ 84 (202)
T 3cvo_A 14 LTMPPAEAEALRM--AYEEAEVILEYGS---GGSTVVAAEL--P-GKHVTSVESD-RAWARMMKAWLAANPPAEGTEVNI 84 (202)
T ss_dssp CCSCHHHHHHHHH--HHHHCSEEEEESC---SHHHHHHHTS--T-TCEEEEEESC-HHHHHHHHHHHHHSCCCTTCEEEE
T ss_pred ccCCHHHHHHHHH--HhhCCCEEEEECc---hHHHHHHHHc--C-CCEEEEEeCC-HHHHHHHHHHHHHcCCCCCCceEE
Confidence 5789999999988 5568999999996 5899999983 2 7999999999 999999999997 77 789999
Q ss_pred EEcchhhh--------------hhh-------cC--CCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCCC
Q 042616 98 VKGDAQKL--------------LMG-------DY--RGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNALP 154 (220)
Q Consensus 98 v~gda~~~--------------L~~-------~~--~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~~ 154 (220)
++||+.+. ++. +. ++|||||||+++ . ..++..+.++ |+| ||+||+||+++
T Consensus 85 ~~gda~~~~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k--~--~~~~~~~l~~--l~~-GG~Iv~DNv~~ 157 (202)
T 3cvo_A 85 VWTDIGPTGDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRF--R--VGCALATAFS--ITR-PVTLLFDDYSQ 157 (202)
T ss_dssp EECCCSSBCGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSS--H--HHHHHHHHHH--CSS-CEEEEETTGGG
T ss_pred EEeCchhhhcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCCC--c--hhHHHHHHHh--cCC-CeEEEEeCCcC
Confidence 99997654 221 22 689999999998 4 3777778888 865 99999999887
Q ss_pred CCCcc
Q 042616 155 KGSWR 159 (220)
Q Consensus 155 ~g~~~ 159 (220)
++.|.
T Consensus 158 r~~y~ 162 (202)
T 3cvo_A 158 RRWQH 162 (202)
T ss_dssp CSSGG
T ss_pred CcchH
Confidence 66443
No 16
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=99.78 E-value=4.7e-19 Score=155.12 Aligned_cols=149 Identities=9% Similarity=-0.023 Sum_probs=118.1
Q ss_pred CCChhHHHHHHHHHhh----CCCCEEEEEcCCchHHHHHHHHHHcCC---CCcEEEEEeCCch-----------------
Q 042616 23 GKEPDVGEFISALAAG----NNAQLIVMACSSIAVSRTLALVAAARQ---TGGRVVCILSGVI----------------- 78 (220)
Q Consensus 23 ~~~p~~~~~L~~La~~----~~a~~ILEIGtg~~G~sTl~LA~A~~~---~~grV~tIE~d~~----------------- 78 (220)
++.+..+.+|+.|++. ..|+.|||+||. .|+|+++||.++++ ++++|+++|..|.
T Consensus 85 mv~~~r~~~L~~l~~~v~~~~~pg~IlEiGv~-~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~ 163 (282)
T 2wk1_A 85 MIGIKRLENIRQCVEDVIGNNVPGDLVETGVW-RGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMAL 163 (282)
T ss_dssp SSHHHHHHHHHHHHHHHHHTTCCCEEEEECCT-TSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCG
T ss_pred ccCHHHHHHHHHHHHHHHhcCCCCcEEEeecC-chHHHHHHHHHhHhcCCCCCEEEEEECCCCCCccccccccccccccc
Confidence 4667788888888876 559999999995 99999999998863 3689999997521
Q ss_pred --------hHHHHHHHHhc--cc-CCcEEEEEcchhhhhhhcC-CCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEE
Q 042616 79 --------GDIDASKKSLG--RY-ANCIEFVKGDAQKLLMGDY-RGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGV 146 (220)
Q Consensus 79 --------~~~~~Ar~~l~--g~-~~~Ve~v~gda~~~L~~~~-~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggv 146 (220)
..++.++++++ |+ .++|+++.|++.+.||.+. ++|||||||+++ +..|.++|+.+.++ |+| ||+
T Consensus 164 ~~~~~~~~~~~~~ar~n~~~~gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~-y~~~~~~Le~~~p~--L~p-GGi 239 (282)
T 2wk1_A 164 HRRNSVLAVSEEEVRRNFRNYDLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL-YESTWDTLTNLYPK--VSV-GGY 239 (282)
T ss_dssp GGGHHHHCCCHHHHHHHHHHTTCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS-HHHHHHHHHHHGGG--EEE-EEE
T ss_pred ccccccchhHHHHHHHHHHHcCCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc-cccHHHHHHHHHhh--cCC-CEE
Confidence 14677999997 77 4899999999999999863 689999999998 33467899999999 875 999
Q ss_pred EEEecCCC-CC---Ccc------ceEEEeeecCCcEEEEE
Q 042616 147 IVGYNALP-KG---SWR------GYKTHFLPIGEGLLVTR 176 (220)
Q Consensus 147 iv~dNv~~-~g---~~~------~~~s~~lPig~Gl~v~~ 176 (220)
||+||+.+ +| .|. ++...+++++.+...=+
T Consensus 240 Iv~DD~~~~~G~~~Av~Ef~~~~~i~~~i~~~~~~~v~~r 279 (282)
T 2wk1_A 240 VIVDDYMMCPPCKDAVDEYRAKFDIADELITIDRDGVYWQ 279 (282)
T ss_dssp EEESSCTTCHHHHHHHHHHHHHTTCCSCCEECSSSCEEEE
T ss_pred EEEcCCCCCHHHHHHHHHHHHhcCCceEEEEecCEEEEEE
Confidence 99999975 55 232 56667788876544433
No 17
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.66 E-value=3.2e-16 Score=132.71 Aligned_cols=118 Identities=12% Similarity=0.040 Sum_probs=99.4
Q ss_pred CCC-hhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHH---cCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEE
Q 042616 23 GKE-PDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAA---ARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFV 98 (220)
Q Consensus 23 ~~~-p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A---~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v 98 (220)
+.. |+.+.++..++...++++||||||| +|++|++||.. +.+ +++|++||.+ +++++.|+ ++.++|+++
T Consensus 63 ~~~~p~~~~~l~~~l~~~~~~~VLDiG~G-tG~~t~~la~~~~~~~~-~~~V~gvD~s-~~~l~~a~----~~~~~v~~~ 135 (236)
T 2bm8_A 63 MLKDPDTQAVYHDMLWELRPRTIVELGVY-NGGSLAWFRDLTKIMGI-DCQVIGIDRD-LSRCQIPA----SDMENITLH 135 (236)
T ss_dssp CCSCHHHHHHHHHHHHHHCCSEEEEECCT-TSHHHHHHHHHHHHTTC-CCEEEEEESC-CTTCCCCG----GGCTTEEEE
T ss_pred ccCCHHHHHHHHHHHHhcCCCEEEEEeCC-CCHHHHHHHHhhhhcCC-CCEEEEEeCC-hHHHHHHh----ccCCceEEE
Confidence 344 8899999998888889999999997 99999999987 344 7999999999 99988777 233689999
Q ss_pred Ecchhhh--hhhcCC-CccEEEEcCCCCCccHHHHHHHHHh-hcCCCCCCEEEEEecC
Q 042616 99 KGDAQKL--LMGDYR-GADFVLIDCNIDIDGHKNVFRAAKE-SVMHGSGAGVIVGYNA 152 (220)
Q Consensus 99 ~gda~~~--L~~~~~-~~D~VfiD~~k~~~~y~~~l~~l~~-~~~L~~~Ggviv~dNv 152 (220)
+||+.+. ++...+ +||+||+|+.+ .++...++.+.+ . |+| ||+++++|+
T Consensus 136 ~gD~~~~~~l~~~~~~~fD~I~~d~~~--~~~~~~l~~~~r~~--Lkp-GG~lv~~d~ 188 (236)
T 2bm8_A 136 QGDCSDLTTFEHLREMAHPLIFIDNAH--ANTFNIMKWAVDHL--LEE-GDYFIIEDM 188 (236)
T ss_dssp ECCSSCSGGGGGGSSSCSSEEEEESSC--SSHHHHHHHHHHHT--CCT-TCEEEECSC
T ss_pred ECcchhHHHHHhhccCCCCEEEECCch--HhHHHHHHHHHHhh--CCC-CCEEEEEeC
Confidence 9999875 554433 79999999998 789999999986 8 876 999999876
No 18
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.61 E-value=2.5e-14 Score=126.00 Aligned_cols=156 Identities=15% Similarity=0.137 Sum_probs=102.7
Q ss_pred HHHhhCCCCEEEEEcCCchH-HHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhcC
Q 042616 34 ALAAGNNAQLIVMACSSIAV-SRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGDY 110 (220)
Q Consensus 34 ~La~~~~a~~ILEIGtg~~G-~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~~ 110 (220)
.++...++++||||||| +| ++++.+|+. .+++|++||.+ +++++.||++++ ++ ++|++++||+.++ + .
T Consensus 116 ~la~l~~g~rVLDIGcG-~G~~ta~~lA~~---~ga~V~gIDis-~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l-~--d 186 (298)
T 3fpf_A 116 ALGRFRRGERAVFIGGG-PLPLTGILLSHV---YGMRVNVVEIE-PDIAELSRKVIEGLGV-DGVNVITGDETVI-D--G 186 (298)
T ss_dssp HHTTCCTTCEEEEECCC-SSCHHHHHHHHT---TCCEEEEEESS-HHHHHHHHHHHHHHTC-CSEEEEESCGGGG-G--G
T ss_pred HHcCCCCcCEEEEECCC-ccHHHHHHHHHc---cCCEEEEEECC-HHHHHHHHHHHHhcCC-CCeEEEECchhhC-C--C
Confidence 46788899999999997 65 555666653 37899999999 999999999997 77 8999999999984 4 4
Q ss_pred CCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCCC-CC------------CccceEEEeeecCC--c-EEE
Q 042616 111 RGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNALP-KG------------SWRGYKTHFLPIGE--G-LLV 174 (220)
Q Consensus 111 ~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~~-~g------------~~~~~~s~~lPig~--G-l~v 174 (220)
++||+||+++.. .++.++++.+.+. |+| ||++++.+... +. .| +......|.++ + +.+
T Consensus 187 ~~FDvV~~~a~~--~d~~~~l~el~r~--LkP-GG~Lvv~~~~~~r~~l~~~v~~~~~~gf-~~~~~~~p~~~v~N~vv~ 260 (298)
T 3fpf_A 187 LEFDVLMVAALA--EPKRRVFRNIHRY--VDT-ETRIIYRTYTGMRAILYAPVSDDDITGF-RRAGVVLPSGKVNNTSVL 260 (298)
T ss_dssp CCCSEEEECTTC--SCHHHHHHHHHHH--CCT-TCEEEEEECCGGGGGSSCCCCTGGGTTE-EEEEEECCCTTCCCEEEE
T ss_pred CCcCEEEECCCc--cCHHHHHHHHHHH--cCC-CcEEEEEcCcchhhhccccCChhhhhhh-hheeEECCCCCcCcEEEE
Confidence 789999999988 8999999999999 886 99988887532 11 12 34556777774 3 555
Q ss_pred EEEeecCC--CC---CCCcCcCceEecccCCCcee
Q 042616 175 TRIGENSD--VG---GGRKRSRWVVTVDKCTGEEH 204 (220)
Q Consensus 175 ~~~~~~~~--~~---~~~~~~~w~~~~d~~~~~~~ 204 (220)
+++....+ .+ +.++|.-|+.-=..+||..|
T Consensus 261 a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (298)
T 3fpf_A 261 VFKCPDKGELNSKLEGKPIPNPLLGLDSTRTGHHH 295 (298)
T ss_dssp EEECC------------------------------
T ss_pred EEccCCchHHHHHHhcccCCcceeccccccccccc
Confidence 54442212 11 56677777766566777655
No 19
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.56 E-value=2.9e-14 Score=120.07 Aligned_cols=130 Identities=21% Similarity=0.217 Sum_probs=109.1
Q ss_pred HHHHHHHhcCCCCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc-
Q 042616 11 KAYLQALKMGKRGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG- 89 (220)
Q Consensus 11 ~aY~~~l~~~~~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~- 89 (220)
..|...++.....+.|....++..++...+..+|||+||| +|..++.|+..+.+ +++|+++|.+ +++++.|+++++
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~vldiG~G-~G~~~~~l~~~~~~-~~~v~~~D~~-~~~~~~a~~~~~~ 140 (255)
T 3mb5_A 64 VDYLDKMKRGPQIVHPKDAALIVAYAGISPGDFIVEAGVG-SGALTLFLANIVGP-EGRVVSYEIR-EDFAKLAWENIKW 140 (255)
T ss_dssp HHHHHHSCCCSCCCCHHHHHHHHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCT-TSEEEEECSC-HHHHHHHHHHHHH
T ss_pred HHHHhhCccccccccHhHHHHHHHhhCCCCCCEEEEecCC-chHHHHHHHHHhCC-CeEEEEEecC-HHHHHHHHHHHHH
Confidence 5677777777777888888888888888889999999997 89999999998665 7999999999 999999999997
Q ss_pred -ccCCcEEEEEcchhhhhhhcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 90 -RYANCIEFVKGDAQKLLMGDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 90 -g~~~~Ve~v~gda~~~L~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
++.++++++++|+.+.++ ..+||+||+|.+. ...+++.+.+. |+| ||.+++...
T Consensus 141 ~~~~~~v~~~~~d~~~~~~--~~~~D~v~~~~~~----~~~~l~~~~~~--L~~-gG~l~~~~~ 195 (255)
T 3mb5_A 141 AGFDDRVTIKLKDIYEGIE--EENVDHVILDLPQ----PERVVEHAAKA--LKP-GGFFVAYTP 195 (255)
T ss_dssp HTCTTTEEEECSCGGGCCC--CCSEEEEEECSSC----GGGGHHHHHHH--EEE-EEEEEEEES
T ss_pred cCCCCceEEEECchhhccC--CCCcCEEEECCCC----HHHHHHHHHHH--cCC-CCEEEEEEC
Confidence 776779999999998654 3679999998765 45678888888 876 888877543
No 20
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.55 E-value=9.7e-14 Score=113.31 Aligned_cols=120 Identities=14% Similarity=0.068 Sum_probs=100.0
Q ss_pred CCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEc
Q 042616 23 GKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKG 100 (220)
Q Consensus 23 ~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~g 100 (220)
+..++....+...+...+..+|||+||| +|+.++.|+...+ .++|+++|.+ +++++.|+++++ ++ ++++++++
T Consensus 23 ~~~~~i~~~~l~~l~~~~~~~vLDiG~G-~G~~~~~la~~~~--~~~v~~vD~s-~~~~~~a~~~~~~~~~-~~v~~~~~ 97 (204)
T 3e05_A 23 ITKQEVRAVTLSKLRLQDDLVMWDIGAG-SASVSIEASNLMP--NGRIFALERN-PQYLGFIRDNLKKFVA-RNVTLVEA 97 (204)
T ss_dssp SCCHHHHHHHHHHTTCCTTCEEEEETCT-TCHHHHHHHHHCT--TSEEEEEECC-HHHHHHHHHHHHHHTC-TTEEEEEC
T ss_pred CChHHHHHHHHHHcCCCCCCEEEEECCC-CCHHHHHHHHHCC--CCEEEEEeCC-HHHHHHHHHHHHHhCC-CcEEEEeC
Confidence 3555665666555577788999999997 9999999998753 5899999999 999999999997 66 78999999
Q ss_pred chhhhhhhcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 101 DAQKLLMGDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 101 da~~~L~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
|+.+.++. .+.||+||++... .++..+++.+.+. |+| ||.+++....
T Consensus 98 d~~~~~~~-~~~~D~i~~~~~~--~~~~~~l~~~~~~--Lkp-gG~l~~~~~~ 144 (204)
T 3e05_A 98 FAPEGLDD-LPDPDRVFIGGSG--GMLEEIIDAVDRR--LKS-EGVIVLNAVT 144 (204)
T ss_dssp CTTTTCTT-SCCCSEEEESCCT--TCHHHHHHHHHHH--CCT-TCEEEEEECB
T ss_pred Chhhhhhc-CCCCCEEEECCCC--cCHHHHHHHHHHh--cCC-CeEEEEEecc
Confidence 99887754 3679999999988 7889999999999 886 8888876544
No 21
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.54 E-value=1.3e-13 Score=113.84 Aligned_cols=118 Identities=17% Similarity=0.149 Sum_probs=96.8
Q ss_pred CCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEE
Q 042616 22 RGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVK 99 (220)
Q Consensus 22 ~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~ 99 (220)
.+..+....++...+...+..+|||+||| +|+.++.||.. +++|++||.+ +++++.|+++++ ++.+++++++
T Consensus 37 ~~~~~~~~~~~l~~l~~~~~~~vLDlGcG-~G~~~~~la~~----~~~v~~vD~s-~~~~~~a~~~~~~~g~~~~v~~~~ 110 (204)
T 3njr_A 37 QITKSPMRALTLAALAPRRGELLWDIGGG-SGSVSVEWCLA----GGRAITIEPR-ADRIENIQKNIDTYGLSPRMRAVQ 110 (204)
T ss_dssp CCCCHHHHHHHHHHHCCCTTCEEEEETCT-TCHHHHHHHHT----TCEEEEEESC-HHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred CCCcHHHHHHHHHhcCCCCCCEEEEecCC-CCHHHHHHHHc----CCEEEEEeCC-HHHHHHHHHHHHHcCCCCCEEEEe
Confidence 44555666666666677778999999997 89999999875 6899999999 999999999997 6655899999
Q ss_pred cchhhhhhhcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 100 GDAQKLLMGDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 100 gda~~~L~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
+|+.+.++. ...||+||+++.. +.. +++.+.+. |+| ||.+++....
T Consensus 111 ~d~~~~~~~-~~~~D~v~~~~~~---~~~-~l~~~~~~--Lkp-gG~lv~~~~~ 156 (204)
T 3njr_A 111 GTAPAALAD-LPLPEAVFIGGGG---SQA-LYDRLWEW--LAP-GTRIVANAVT 156 (204)
T ss_dssp SCTTGGGTT-SCCCSEEEECSCC---CHH-HHHHHHHH--SCT-TCEEEEEECS
T ss_pred Cchhhhccc-CCCCCEEEECCcc---cHH-HHHHHHHh--cCC-CcEEEEEecC
Confidence 999997755 4579999999854 445 89999998 876 8888886554
No 22
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.53 E-value=2.7e-13 Score=109.54 Aligned_cols=106 Identities=10% Similarity=0.084 Sum_probs=85.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhc-CCCccE
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGD-YRGADF 115 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~-~~~~D~ 115 (220)
.+.++|||+||| +|..++.++.. ...+|++||.+ +++++.|+++++ ++ ++++++++|+.+.++.. .++||+
T Consensus 43 ~~~~~vLDlgcG-~G~~~~~~~~~---~~~~v~~vD~~-~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~fD~ 116 (189)
T 3p9n_A 43 LTGLAVLDLYAG-SGALGLEALSR---GAASVLFVESD-QRSAAVIARNIEALGL-SGATLRRGAVAAVVAAGTTSPVDL 116 (189)
T ss_dssp CTTCEEEEETCT-TCHHHHHHHHT---TCSEEEEEECC-HHHHHHHHHHHHHHTC-SCEEEEESCHHHHHHHCCSSCCSE
T ss_pred CCCCEEEEeCCC-cCHHHHHHHHC---CCCeEEEEECC-HHHHHHHHHHHHHcCC-CceEEEEccHHHHHhhccCCCccE
Confidence 577899999997 99999987762 25699999999 999999999997 66 68999999999987654 478999
Q ss_pred EEEcCCCCC--ccHHHHHHHHHhhcCCCCCCEEEEEec
Q 042616 116 VLIDCNIDI--DGHKNVFRAAKESVMHGSGAGVIVGYN 151 (220)
Q Consensus 116 VfiD~~k~~--~~y~~~l~~l~~~~~L~~~Ggviv~dN 151 (220)
|++|.+... .++.+.++.+.+..+|+| ||++++..
T Consensus 117 i~~~~p~~~~~~~~~~~l~~~~~~~~L~p-gG~l~~~~ 153 (189)
T 3p9n_A 117 VLADPPYNVDSADVDAILAALGTNGWTRE-GTVAVVER 153 (189)
T ss_dssp EEECCCTTSCHHHHHHHHHHHHHSSSCCT-TCEEEEEE
T ss_pred EEECCCCCcchhhHHHHHHHHHhcCccCC-CeEEEEEe
Confidence 999987622 246788888888222876 77776653
No 23
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.52 E-value=8.1e-14 Score=123.26 Aligned_cols=134 Identities=12% Similarity=0.146 Sum_probs=100.1
Q ss_pred hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc----cc-CCcEEEEEcchhhhhhhcCCC
Q 042616 38 GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG----RY-ANCIEFVKGDAQKLLMGDYRG 112 (220)
Q Consensus 38 ~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~----g~-~~~Ve~v~gda~~~L~~~~~~ 112 (220)
..++++||||||| +|+++..|++.. + .++|++||+| +.+++.|++++. ++ ..+++++++|+.+.++...++
T Consensus 106 ~~~~~~VLdIG~G-~G~~~~~l~~~~-~-~~~v~~vDid-~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~ 181 (314)
T 2b2c_A 106 HPDPKRVLIIGGG-DGGILREVLKHE-S-VEKVTMCEID-EMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNE 181 (314)
T ss_dssp SSSCCEEEEESCT-TSHHHHHHTTCT-T-CCEEEEECSC-HHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTC
T ss_pred CCCCCEEEEEcCC-cCHHHHHHHHcC-C-CCEEEEEECC-HHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCC
Confidence 4578999999996 999999998743 2 6899999999 999999999986 33 468999999999988664578
Q ss_pred ccEEEEcCCCC----CccH-HHHHHHHHhhcCCCCCCEEEEEecCC--CCC-C-----------cc--ceEEEeeec---
Q 042616 113 ADFVLIDCNID----IDGH-KNVFRAAKESVMHGSGAGVIVGYNAL--PKG-S-----------WR--GYKTHFLPI--- 168 (220)
Q Consensus 113 ~D~VfiD~~k~----~~~y-~~~l~~l~~~~~L~~~Ggviv~dNv~--~~g-~-----------~~--~~~s~~lPi--- 168 (220)
||+||+|.... ...| .++++.+.+. |+| ||++++++-. .+. . |. ++.++.+|+
T Consensus 182 fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~--Lkp-gG~lv~~~~~~~~~~~~~~~~~~~l~~vF~~v~~~~~~iP~~~~ 258 (314)
T 2b2c_A 182 FDVIITDSSDPVGPAESLFGQSYYELLRDA--LKE-DGILSSQGESVWLHLPLIAHLVAFNRKIFPAVTYAQSIVSTYPS 258 (314)
T ss_dssp EEEEEECCC-------------HHHHHHHH--EEE-EEEEEEECCCTTTCHHHHHHHHHHHHHHCSEEEEEEEECTTSGG
T ss_pred ceEEEEcCCCCCCcchhhhHHHHHHHHHhh--cCC-CeEEEEECCCcccCHHHHHHHHHHHHHHCCcceEEEEEecCcCC
Confidence 99999998431 1334 7889999999 876 9999998632 221 0 21 466778888
Q ss_pred CC-cEEEEEEe
Q 042616 169 GE-GLLVTRIG 178 (220)
Q Consensus 169 g~-Gl~v~~~~ 178 (220)
|+ |+.++.+.
T Consensus 259 g~~g~~~ask~ 269 (314)
T 2b2c_A 259 GSMGYLICAKN 269 (314)
T ss_dssp GEEEEEEEESS
T ss_pred CceEEEEEeCC
Confidence 45 77777655
No 24
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.51 E-value=1.3e-12 Score=109.74 Aligned_cols=101 Identities=14% Similarity=0.013 Sum_probs=84.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhh--hcCCCcc
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLM--GDYRGAD 114 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~--~~~~~~D 114 (220)
.++.+||||||| +|+.++.||...+ +++|++||++ +++++.|+++++ ++ .+|+++++|+.++.. ...++||
T Consensus 69 ~~~~~vLDiG~G-~G~~~~~la~~~~--~~~v~~vD~s-~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~fD 143 (240)
T 1xdz_A 69 NQVNTICDVGAG-AGFPSLPIKICFP--HLHVTIVDSL-NKRITFLEKLSEALQL-ENTTFCHDRAETFGQRKDVRESYD 143 (240)
T ss_dssp GGCCEEEEECSS-SCTTHHHHHHHCT--TCEEEEEESC-HHHHHHHHHHHHHHTC-SSEEEEESCHHHHTTCTTTTTCEE
T ss_pred CCCCEEEEecCC-CCHHHHHHHHhCC--CCEEEEEeCC-HHHHHHHHHHHHHcCC-CCEEEEeccHHHhcccccccCCcc
Confidence 367899999997 9999999997543 6899999999 999999999987 66 369999999988642 1246899
Q ss_pred EEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 115 FVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 115 ~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
+|+.++ . .++..+++.+.+. |+| ||.+++.
T Consensus 144 ~V~~~~-~--~~~~~~l~~~~~~--Lkp-gG~l~~~ 173 (240)
T 1xdz_A 144 IVTARA-V--ARLSVLSELCLPL--VKK-NGLFVAL 173 (240)
T ss_dssp EEEEEC-C--SCHHHHHHHHGGG--EEE-EEEEEEE
T ss_pred EEEEec-c--CCHHHHHHHHHHh--cCC-CCEEEEE
Confidence 999988 4 5789999999998 886 7777664
No 25
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.49 E-value=1.5e-13 Score=120.93 Aligned_cols=134 Identities=15% Similarity=0.135 Sum_probs=101.1
Q ss_pred hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc----cc-CCcEEEEEcchhhhhhhcCCC
Q 042616 38 GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG----RY-ANCIEFVKGDAQKLLMGDYRG 112 (220)
Q Consensus 38 ~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~----g~-~~~Ve~v~gda~~~L~~~~~~ 112 (220)
..++++||||||| +|+++..|++.. + ..+|++||+| +++++.|++++. ++ ..+++++++|+.+.++...++
T Consensus 93 ~~~~~~VLdiG~G-~G~~~~~l~~~~-~-~~~v~~vDid-~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~ 168 (304)
T 2o07_A 93 HPNPRKVLIIGGG-DGGVLREVVKHP-S-VESVVQCEID-EDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDA 168 (304)
T ss_dssp SSSCCEEEEEECT-TSHHHHHHTTCT-T-CCEEEEEESC-HHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSC
T ss_pred CCCCCEEEEECCC-chHHHHHHHHcC-C-CCEEEEEECC-HHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCC
Confidence 3578999999996 999999988642 2 5899999999 999999999985 34 478999999999988765578
Q ss_pred ccEEEEcCCCCC-----ccHHHHHHHHHhhcCCCCCCEEEEEecCC-CCC-----C--------cc--ceEEEeeecC--
Q 042616 113 ADFVLIDCNIDI-----DGHKNVFRAAKESVMHGSGAGVIVGYNAL-PKG-----S--------WR--GYKTHFLPIG-- 169 (220)
Q Consensus 113 ~D~VfiD~~k~~-----~~y~~~l~~l~~~~~L~~~Ggviv~dNv~-~~g-----~--------~~--~~~s~~lPig-- 169 (220)
||+||+|..... ..+.++++.+.+. |+| ||++++++.. +.. . |. ++.++.+|.-
T Consensus 169 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~--Lkp-gG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~~~ 245 (304)
T 2o07_A 169 FDVIITDSSDPMGPAESLFKESYYQLMKTA--LKE-DGVLCCQGECQWLHLDLIKEMRQFCQSLFPVVAYAYCTIPTYPS 245 (304)
T ss_dssp EEEEEEECC-----------CHHHHHHHHH--EEE-EEEEEEEEECTTTCHHHHHHHHHHHHHHCSEEEEEEEECTTSGG
T ss_pred ceEEEECCCCCCCcchhhhHHHHHHHHHhc--cCC-CeEEEEecCCcccchHHHHHHHHHHHHhCCCceeEEEEeccccC
Confidence 999999987511 1235789999998 876 9999998733 322 1 11 5666778883
Q ss_pred --CcEEEEEEe
Q 042616 170 --EGLLVTRIG 178 (220)
Q Consensus 170 --~Gl~v~~~~ 178 (220)
.|+.++.+.
T Consensus 246 g~~g~~~as~~ 256 (304)
T 2o07_A 246 GQIGFMLCSKN 256 (304)
T ss_dssp GEEEEEEEESS
T ss_pred cceEEEEEeCC
Confidence 367777654
No 26
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.49 E-value=1.1e-13 Score=110.19 Aligned_cols=106 Identities=10% Similarity=0.004 Sum_probs=85.8
Q ss_pred hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhcCCCccE
Q 042616 38 GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGDYRGADF 115 (220)
Q Consensus 38 ~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~~~~~D~ 115 (220)
..+.++|||+||| +|..++.++.. ...+|+++|.+ +++++.|+++++ ++.++++++++|+.+.++...+.||+
T Consensus 29 ~~~~~~vLDlGcG-~G~~~~~l~~~---~~~~v~~vD~~-~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~ 103 (177)
T 2esr_A 29 YFNGGRVLDLFAG-SGGLAIEAVSR---GMSAAVLVEKN-RKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDL 103 (177)
T ss_dssp CCCSCEEEEETCT-TCHHHHHHHHT---TCCEEEEECCC-HHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEE
T ss_pred hcCCCeEEEeCCC-CCHHHHHHHHc---CCCEEEEEECC-HHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCE
Confidence 4567899999997 99999998874 14799999999 999999999997 56568999999999987765678999
Q ss_pred EEEcCCCCCccHHHHHHHHH--hhcCCCCCCEEEEEec
Q 042616 116 VLIDCNIDIDGHKNVFRAAK--ESVMHGSGAGVIVGYN 151 (220)
Q Consensus 116 VfiD~~k~~~~y~~~l~~l~--~~~~L~~~Ggviv~dN 151 (220)
|+.|.+.....+.+.++.+. +. |+| ||++++..
T Consensus 104 i~~~~~~~~~~~~~~~~~l~~~~~--L~~-gG~l~~~~ 138 (177)
T 2esr_A 104 VFLDPPYAKETIVATIEALAAKNL--LSE-QVMVVCET 138 (177)
T ss_dssp EEECCSSHHHHHHHHHHHHHHTTC--EEE-EEEEEEEE
T ss_pred EEECCCCCcchHHHHHHHHHhCCC--cCC-CcEEEEEE
Confidence 99998741145567777776 55 776 88877753
No 27
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.48 E-value=3.8e-13 Score=106.44 Aligned_cols=117 Identities=14% Similarity=0.081 Sum_probs=92.5
Q ss_pred hHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhh
Q 042616 27 DVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQK 104 (220)
Q Consensus 27 ~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~ 104 (220)
+..+.+.......+..+|||+||| +|..++.++...+ +.+|+++|.+ +.+++.|+++++ ++.+++ ++++|+.+
T Consensus 12 ~~~~~~~~~~~~~~~~~vldiG~G-~G~~~~~l~~~~~--~~~v~~vD~~-~~~~~~a~~~~~~~~~~~~~-~~~~d~~~ 86 (178)
T 3hm2_A 12 HVRALAISALAPKPHETLWDIGGG-SGSIAIEWLRSTP--QTTAVCFEIS-EERRERILSNAINLGVSDRI-AVQQGAPR 86 (178)
T ss_dssp HHHHHHHHHHCCCTTEEEEEESTT-TTHHHHHHHTTSS--SEEEEEECSC-HHHHHHHHHHHHTTTCTTSE-EEECCTTG
T ss_pred HHHHHHHHHhcccCCCeEEEeCCC-CCHHHHHHHHHCC--CCeEEEEeCC-HHHHHHHHHHHHHhCCCCCE-EEecchHh
Confidence 344444444466677899999997 8999999998753 6899999999 999999999987 665589 99999988
Q ss_pred hhhhcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCCC
Q 042616 105 LLMGDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNALP 154 (220)
Q Consensus 105 ~L~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~~ 154 (220)
.++...++||+||++... .. ..+++.+.+. |+| ||.+++.....
T Consensus 87 ~~~~~~~~~D~i~~~~~~--~~-~~~l~~~~~~--L~~-gG~l~~~~~~~ 130 (178)
T 3hm2_A 87 AFDDVPDNPDVIFIGGGL--TA-PGVFAAAWKR--LPV-GGRLVANAVTV 130 (178)
T ss_dssp GGGGCCSCCSEEEECC-T--TC-TTHHHHHHHT--CCT-TCEEEEEECSH
T ss_pred hhhccCCCCCEEEECCcc--cH-HHHHHHHHHh--cCC-CCEEEEEeecc
Confidence 777644789999998877 33 6788999998 876 88887765543
No 28
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.48 E-value=1.9e-13 Score=115.26 Aligned_cols=116 Identities=15% Similarity=-0.010 Sum_probs=91.2
Q ss_pred HHHHHHHh--hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhh
Q 042616 30 EFISALAA--GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLM 107 (220)
Q Consensus 30 ~~L~~La~--~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~ 107 (220)
.++.+++. ..++.+||||||| +|+++.+|++.. ..+|++||++ |.+++.|+++.+....+++++.+|+.+.++
T Consensus 48 ~~m~~~a~~~~~~G~rVLdiG~G-~G~~~~~~~~~~---~~~v~~id~~-~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~ 122 (236)
T 3orh_A 48 PYMHALAAAASSKGGRVLEVGFG-MAIAASKVQEAP---IDEHWIIECN-DGVFQRLRDWAPRQTHKVIPLKGLWEDVAP 122 (236)
T ss_dssp HHHHHHHHHHTTTCEEEEEECCT-TSHHHHHHTTSC---EEEEEEEECC-HHHHHHHHHHGGGCSSEEEEEESCHHHHGG
T ss_pred HHHHHHHHhhccCCCeEEEECCC-ccHHHHHHHHhC---CcEEEEEeCC-HHHHHHHHHHHhhCCCceEEEeehHHhhcc
Confidence 34444443 3456899999997 999999988642 4689999999 999999999987444679999999999876
Q ss_pred hc-CCCccEEEEcCCCC------CccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 108 GD-YRGADFVLIDCNID------IDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 108 ~~-~~~~D~VfiD~~k~------~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
.+ .++||.|+.|.... ..+...+++.+.+. |+| ||++++.|..
T Consensus 123 ~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rv--LkP-GG~l~f~~~~ 172 (236)
T 3orh_A 123 TLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRL--LKP-GGVLTYCNLT 172 (236)
T ss_dssp GSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHH--EEE-EEEEEECCHH
T ss_pred cccccCCceEEEeeeecccchhhhcchhhhhhhhhhe--eCC-CCEEEEEecC
Confidence 65 46899999997541 13456788899998 886 9999998754
No 29
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.46 E-value=2.5e-13 Score=116.40 Aligned_cols=133 Identities=12% Similarity=0.062 Sum_probs=105.3
Q ss_pred hhHHHHHHHHhcCCCCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHH
Q 042616 8 NATKAYLQALKMGKRGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKS 87 (220)
Q Consensus 8 ~a~~aY~~~l~~~~~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~ 87 (220)
..+..|.+.+......+.|..+..+...+...+..+|||+||| +|..++.|+..+.+ +++|+++|.+ +++++.|+++
T Consensus 80 p~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~VLDiG~G-~G~~~~~la~~~~~-~~~v~~vD~s-~~~~~~a~~~ 156 (277)
T 1o54_A 80 PSLIDEIMNMKRRTQIVYPKDSSFIAMMLDVKEGDRIIDTGVG-SGAMCAVLARAVGS-SGKVFAYEKR-EEFAKLAESN 156 (277)
T ss_dssp CCHHHHHHTCCC-CCCCCHHHHHHHHHHTTCCTTCEEEEECCT-TSHHHHHHHHHTTT-TCEEEEECCC-HHHHHHHHHH
T ss_pred CCHHHHHhhccccCCccCHHHHHHHHHHhCCCCCCEEEEECCc-CCHHHHHHHHHhCC-CcEEEEEECC-HHHHHHHHHH
Confidence 3445666666666666777777777777777888999999997 89999999988654 6899999999 9999999999
Q ss_pred hc--ccCCcEEEEEcchhhhhhhcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 88 LG--RYANCIEFVKGDAQKLLMGDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 88 l~--g~~~~Ve~v~gda~~~L~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
++ ++.++++++++|+.+.++. ++||+||+|.+. ...+++.+.+. |+| ||.+++...
T Consensus 157 ~~~~~~~~~v~~~~~d~~~~~~~--~~~D~V~~~~~~----~~~~l~~~~~~--L~p-gG~l~~~~~ 214 (277)
T 1o54_A 157 LTKWGLIERVTIKVRDISEGFDE--KDVDALFLDVPD----PWNYIDKCWEA--LKG-GGRFATVCP 214 (277)
T ss_dssp HHHTTCGGGEEEECCCGGGCCSC--CSEEEEEECCSC----GGGTHHHHHHH--EEE-EEEEEEEES
T ss_pred HHHcCCCCCEEEEECCHHHcccC--CccCEEEECCcC----HHHHHHHHHHH--cCC-CCEEEEEeC
Confidence 97 5556899999999887543 679999998754 34678888888 876 777776543
No 30
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.45 E-value=7.7e-13 Score=108.77 Aligned_cols=105 Identities=10% Similarity=-0.007 Sum_probs=83.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhcCCCccEE
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGDYRGADFV 116 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~~~~~D~V 116 (220)
.+..+|||+||| +|..++.++... ..+|++||.+ +++++.|+++++ ++ ++++++++|+.+.++...+.||+|
T Consensus 53 ~~~~~vLDlgcG-~G~~~~~l~~~~---~~~V~~vD~s-~~~l~~a~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~fD~V 126 (202)
T 2fpo_A 53 IVDAQCLDCFAG-SGALGLEALSRY---AAGATLIEMD-RAVSQQLIKNLATLKA-GNARVVNSNAMSFLAQKGTPHNIV 126 (202)
T ss_dssp HTTCEEEETTCT-TCHHHHHHHHTT---CSEEEEECSC-HHHHHHHHHHHHHTTC-CSEEEECSCHHHHHSSCCCCEEEE
T ss_pred cCCCeEEEeCCC-cCHHHHHHHhcC---CCEEEEEECC-HHHHHHHHHHHHHcCC-CcEEEEECCHHHHHhhcCCCCCEE
Confidence 367899999997 999999877541 3599999999 999999999997 55 689999999999886545689999
Q ss_pred EEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 117 LIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 117 fiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
|+|.+-....+.+.++.+.+..+|+| ||++++.
T Consensus 127 ~~~~p~~~~~~~~~l~~l~~~~~L~p-gG~l~i~ 159 (202)
T 2fpo_A 127 FVDPPFRRGLLEETINLLEDNGWLAD-EALIYVE 159 (202)
T ss_dssp EECCSSSTTTHHHHHHHHHHTTCEEE-EEEEEEE
T ss_pred EECCCCCCCcHHHHHHHHHhcCccCC-CcEEEEE
Confidence 99988322577888888876212665 8877665
No 31
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.45 E-value=6.4e-13 Score=109.14 Aligned_cols=104 Identities=11% Similarity=0.041 Sum_probs=82.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccC-CcEEEEEcchhhhhhhc-CCC-c
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYA-NCIEFVKGDAQKLLMGD-YRG-A 113 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~-~~Ve~v~gda~~~L~~~-~~~-~ 113 (220)
.+..+|||+||| +|..++.++.. ..++|++||.+ +++++.|+++++ ++. ++++++++|+.+.++.+ .++ |
T Consensus 52 ~~~~~vLDlGcG-tG~~~~~~~~~---~~~~v~gvD~s-~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~f 126 (201)
T 2ift_A 52 IHQSECLDGFAG-SGSLGFEALSR---QAKKVTFLELD-KTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHF 126 (201)
T ss_dssp HTTCEEEETTCT-TCHHHHHHHHT---TCSEEEEECSC-HHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCE
T ss_pred cCCCeEEEcCCc-cCHHHHHHHHc---cCCEEEEEECC-HHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCC
Confidence 367899999997 99999986653 13699999999 999999999997 553 68999999999987653 467 9
Q ss_pred cEEEEcCCCCCccHHHHHHHHH--hhcCCCCCCEEEEEe
Q 042616 114 DFVLIDCNIDIDGHKNVFRAAK--ESVMHGSGAGVIVGY 150 (220)
Q Consensus 114 D~VfiD~~k~~~~y~~~l~~l~--~~~~L~~~Ggviv~d 150 (220)
|+||+|.+-....+.+.++.+. +. |+| ||++++.
T Consensus 127 D~I~~~~~~~~~~~~~~l~~~~~~~~--Lkp-gG~l~i~ 162 (201)
T 2ift_A 127 DVVFLDPPFHFNLAEQAISLLCENNW--LKP-NALIYVE 162 (201)
T ss_dssp EEEEECCCSSSCHHHHHHHHHHHTTC--EEE-EEEEEEE
T ss_pred CEEEECCCCCCccHHHHHHHHHhcCc--cCC-CcEEEEE
Confidence 9999998832256788888884 44 666 7877664
No 32
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.44 E-value=1.1e-12 Score=104.55 Aligned_cols=116 Identities=17% Similarity=0.139 Sum_probs=87.8
Q ss_pred hHHHHHHHHHh-hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchh
Q 042616 27 DVGEFISALAA-GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQ 103 (220)
Q Consensus 27 ~~~~~L~~La~-~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~ 103 (220)
...+.+...+. ..+.++|||+||| +|..++.++.. ...+|++||.+ +.+++.|+++++ ++.++++++++|+.
T Consensus 30 ~~~~~~~~~l~~~~~~~~vLD~GcG-~G~~~~~~~~~---~~~~v~~vD~~-~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 104 (187)
T 2fhp_A 30 KVKESIFNMIGPYFDGGMALDLYSG-SGGLAIEAVSR---GMDKSICIEKN-FAALKVIKENIAITKEPEKFEVRKMDAN 104 (187)
T ss_dssp HHHHHHHHHHCSCCSSCEEEETTCT-TCHHHHHHHHT---TCSEEEEEESC-HHHHHHHHHHHHHHTCGGGEEEEESCHH
T ss_pred HHHHHHHHHHHhhcCCCCEEEeCCc-cCHHHHHHHHc---CCCEEEEEECC-HHHHHHHHHHHHHhCCCcceEEEECcHH
Confidence 33444433332 3467899999997 99999988762 24799999999 999999999997 55568999999999
Q ss_pred hhhhhc---CCCccEEEEcCCCCCccHHHHHHHH--HhhcCCCCCCEEEEEe
Q 042616 104 KLLMGD---YRGADFVLIDCNIDIDGHKNVFRAA--KESVMHGSGAGVIVGY 150 (220)
Q Consensus 104 ~~L~~~---~~~~D~VfiD~~k~~~~y~~~l~~l--~~~~~L~~~Ggviv~d 150 (220)
+.++.+ .++||+|+.|.+-......+.++.+ .+. |+| ||++++.
T Consensus 105 ~~~~~~~~~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~--L~~-gG~l~~~ 153 (187)
T 2fhp_A 105 RALEQFYEEKLQFDLVLLDPPYAKQEIVSQLEKMLERQL--LTN-EAVIVCE 153 (187)
T ss_dssp HHHHHHHHTTCCEEEEEECCCGGGCCHHHHHHHHHHTTC--EEE-EEEEEEE
T ss_pred HHHHHHHhcCCCCCEEEECCCCCchhHHHHHHHHHHhcc--cCC-CCEEEEE
Confidence 876533 4689999999873125667778877 555 776 8887765
No 33
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.44 E-value=5.8e-13 Score=117.43 Aligned_cols=133 Identities=20% Similarity=0.170 Sum_probs=102.7
Q ss_pred hHHHHHHHHhcCCCCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHh
Q 042616 9 ATKAYLQALKMGKRGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSL 88 (220)
Q Consensus 9 a~~aY~~~l~~~~~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l 88 (220)
+...|...++.+..+..|....++..++...+..+|||+||| +|+.++.|+....+ .++|+++|.+ +.+++.|++++
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~~VLDiG~G-~G~~~~~la~~~g~-~~~v~~vD~~-~~~~~~a~~~~ 150 (336)
T 2b25_A 74 ALEDYVVLMKRGTAITFPKDINMILSMMDINPGDTVLEAGSG-SGGMSLFLSKAVGS-QGRVISFEVR-KDHHDLAKKNY 150 (336)
T ss_dssp CHHHHHHHSCCSSCCCCHHHHHHHHHHHTCCTTCEEEEECCT-TSHHHHHHHHHHCT-TCEEEEEESS-HHHHHHHHHHH
T ss_pred CHHHHhhhhcCCCcccCHHHHHHHHHhcCCCCCCEEEEeCCC-cCHHHHHHHHHhCC-CceEEEEeCC-HHHHHHHHHHH
Confidence 345676667777778888877777667678888999999997 89999999987644 5899999999 99999999998
Q ss_pred c--c----------cCCcEEEEEcchhhhhhhc-CCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEec
Q 042616 89 G--R----------YANCIEFVKGDAQKLLMGD-YRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYN 151 (220)
Q Consensus 89 ~--g----------~~~~Ve~v~gda~~~L~~~-~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dN 151 (220)
. + +.++|+++++|+.+.++.+ .++||+||+|... +...++.+.+. |+| ||.+++..
T Consensus 151 ~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~~----~~~~l~~~~~~--Lkp-gG~lv~~~ 219 (336)
T 2b25_A 151 KHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIKSLTFDAVALDMLN----PHVTLPVFYPH--LKH-GGVCAVYV 219 (336)
T ss_dssp HHHHHHHTTTCSSCCCCCEEEEESCTTCCC-------EEEEEECSSS----TTTTHHHHGGG--EEE-EEEEEEEE
T ss_pred HHhhcccccccccccCCceEEEECChHHcccccCCCCeeEEEECCCC----HHHHHHHHHHh--cCC-CcEEEEEe
Confidence 6 2 2368999999998865332 3579999998765 33478888888 876 88877643
No 34
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.44 E-value=2.4e-12 Score=102.25 Aligned_cols=118 Identities=19% Similarity=0.198 Sum_probs=97.9
Q ss_pred CCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEc
Q 042616 23 GKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKG 100 (220)
Q Consensus 23 ~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~g 100 (220)
...+...+++...+...+..+|||+||| +|..++.++.. ..+|+++|.+ +.+++.|+++++ ++.++++++++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~vldiG~G-~G~~~~~l~~~----~~~v~~~D~~-~~~~~~a~~~~~~~~~~~~~~~~~~ 89 (192)
T 1l3i_A 16 PTAMEVRCLIMCLAEPGKNDVAVDVGCG-TGGVTLELAGR----VRRVYAIDRN-PEAISTTEMNLQRHGLGDNVTLMEG 89 (192)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEEEEESCT-TSHHHHHHHTT----SSEEEEEESC-HHHHHHHHHHHHHTTCCTTEEEEES
T ss_pred CChHHHHHHHHHhcCCCCCCEEEEECCC-CCHHHHHHHHh----cCEEEEEECC-HHHHHHHHHHHHHcCCCcceEEEec
Confidence 4556667777777777888999999997 89999988875 3799999999 999999999987 55568999999
Q ss_pred chhhhhhhcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 101 DAQKLLMGDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 101 da~~~L~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
|+.+.++. .+.||+|+.+... ......++.+.+. |+| ||.++....
T Consensus 90 d~~~~~~~-~~~~D~v~~~~~~--~~~~~~l~~~~~~--l~~-gG~l~~~~~ 135 (192)
T 1l3i_A 90 DAPEALCK-IPDIDIAVVGGSG--GELQEILRIIKDK--LKP-GGRIIVTAI 135 (192)
T ss_dssp CHHHHHTT-SCCEEEEEESCCT--TCHHHHHHHHHHT--EEE-EEEEEEEEC
T ss_pred CHHHhccc-CCCCCEEEECCch--HHHHHHHHHHHHh--cCC-CcEEEEEec
Confidence 99886654 3589999999887 6789999999998 876 888777544
No 35
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.43 E-value=1.5e-12 Score=109.26 Aligned_cols=130 Identities=17% Similarity=0.144 Sum_probs=104.2
Q ss_pred HHHHHHHHhcCCCCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc
Q 042616 10 TKAYLQALKMGKRGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG 89 (220)
Q Consensus 10 ~~aY~~~l~~~~~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~ 89 (220)
...|...+......+.|.....+..++...+..+|||+||| +|..++.|+..+.+ +++|+++|.+ +.+++.|+++++
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~-~~~v~~~D~~-~~~~~~a~~~~~ 142 (258)
T 2pwy_A 66 LEEYLLHMKRSATPTYPKDASAMVTLLDLAPGMRVLEAGTG-SGGLTLFLARAVGE-KGLVESYEAR-PHHLAQAERNVR 142 (258)
T ss_dssp HHHHHHHSCCSSCCCCHHHHHHHHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCT-TSEEEEEESC-HHHHHHHHHHHH
T ss_pred HHHHhhcCccccccccchHHHHHHHHcCCCCCCEEEEECCC-cCHHHHHHHHHhCC-CCEEEEEeCC-HHHHHHHHHHHH
Confidence 44677777767777788777777777777888999999997 89999999998654 6899999999 999999999986
Q ss_pred cc--CCcEEEEEcchhhh-hhhcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEec
Q 042616 90 RY--ANCIEFVKGDAQKL-LMGDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYN 151 (220)
Q Consensus 90 g~--~~~Ve~v~gda~~~-L~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dN 151 (220)
.. .++++++++|+.+. ++ .++||+|++|.+. ....++.+.+. |+| ||.+++..
T Consensus 143 ~~~g~~~v~~~~~d~~~~~~~--~~~~D~v~~~~~~----~~~~l~~~~~~--L~~-gG~l~~~~ 198 (258)
T 2pwy_A 143 AFWQVENVRFHLGKLEEAELE--EAAYDGVALDLME----PWKVLEKAALA--LKP-DRFLVAYL 198 (258)
T ss_dssp HHCCCCCEEEEESCGGGCCCC--TTCEEEEEEESSC----GGGGHHHHHHH--EEE-EEEEEEEE
T ss_pred HhcCCCCEEEEECchhhcCCC--CCCcCEEEECCcC----HHHHHHHHHHh--CCC-CCEEEEEe
Confidence 22 46899999999886 43 3679999998754 44678888888 876 77766643
No 36
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.42 E-value=9.8e-13 Score=105.40 Aligned_cols=112 Identities=9% Similarity=0.020 Sum_probs=83.6
Q ss_pred HHHHHHHHhh--CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhh
Q 042616 29 GEFISALAAG--NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQK 104 (220)
Q Consensus 29 ~~~L~~La~~--~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~ 104 (220)
.++...+... .+..+|||+||| +|+.|+.|+.. +++|++||.+ +++++.|+++++ ++ +++++++++..+
T Consensus 9 ~~~~~~~l~~~~~~~~~vLDiGcG-~G~~~~~la~~----~~~v~~vD~s-~~~l~~a~~~~~~~~~-~~v~~~~~~~~~ 81 (185)
T 3mti_A 9 IHMSHDFLAEVLDDESIVVDATMG-NGNDTAFLAGL----SKKVYAFDVQ-EQALGKTSQRLSDLGI-ENTELILDGHEN 81 (185)
T ss_dssp HHHHHHHHHTTCCTTCEEEESCCT-TSHHHHHHHTT----SSEEEEEESC-HHHHHHHHHHHHHHTC-CCEEEEESCGGG
T ss_pred HHHHHHHHHHhCCCCCEEEEEcCC-CCHHHHHHHHh----CCEEEEEECC-HHHHHHHHHHHHHcCC-CcEEEEeCcHHH
Confidence 3444444443 356899999997 99999999874 6899999999 999999999997 66 789999988877
Q ss_pred hhhhcCCCccEEEEcC-CCC---------CccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 105 LLMGDYRGADFVLIDC-NID---------IDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 105 ~L~~~~~~~D~VfiD~-~k~---------~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
+.+...++||+|+.+. ... .......++.+.+. |+| ||.+++-
T Consensus 82 l~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--Lkp-gG~l~i~ 134 (185)
T 3mti_A 82 LDHYVREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDR--LEV-GGRLAIM 134 (185)
T ss_dssp GGGTCCSCEEEEEEEEC-----------CHHHHHHHHHHHHHH--EEE-EEEEEEE
T ss_pred HHhhccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHh--cCC-CcEEEEE
Confidence 5433356899999883 110 02335677888888 887 7776653
No 37
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.42 E-value=7.4e-13 Score=108.16 Aligned_cols=112 Identities=12% Similarity=0.020 Sum_probs=90.9
Q ss_pred CCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEc
Q 042616 23 GKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKG 100 (220)
Q Consensus 23 ~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~g 100 (220)
...|...+.+..++...+..+||||||| +|+.++.|+.. +++|+++|.+ +++++.|+++++ ++ .+++++++
T Consensus 60 ~~~~~~~~~~~~~l~~~~~~~vLdiG~G-~G~~~~~la~~----~~~v~~vD~~-~~~~~~a~~~~~~~~~-~~v~~~~~ 132 (210)
T 3lbf_A 60 ISQPYMVARMTELLELTPQSRVLEIGTG-SGYQTAILAHL----VQHVCSVERI-KGLQWQARRRLKNLDL-HNVSTRHG 132 (210)
T ss_dssp ECCHHHHHHHHHHTTCCTTCEEEEECCT-TSHHHHHHHHH----SSEEEEEESC-HHHHHHHHHHHHHTTC-CSEEEEES
T ss_pred eCCHHHHHHHHHhcCCCCCCEEEEEcCC-CCHHHHHHHHh----CCEEEEEecC-HHHHHHHHHHHHHcCC-CceEEEEC
Confidence 4467777777777777888999999997 99999999986 6899999999 999999999997 55 47999999
Q ss_pred chhhhhhhcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 101 DAQKLLMGDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 101 da~~~L~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
|+.+.++. .++||+|+++... ..+. +.+.+. |+| ||.+++.
T Consensus 133 d~~~~~~~-~~~~D~i~~~~~~--~~~~---~~~~~~--L~p-gG~lv~~ 173 (210)
T 3lbf_A 133 DGWQGWQA-RAPFDAIIVTAAP--PEIP---TALMTQ--LDE-GGILVLP 173 (210)
T ss_dssp CGGGCCGG-GCCEEEEEESSBC--SSCC---THHHHT--EEE-EEEEEEE
T ss_pred CcccCCcc-CCCccEEEEccch--hhhh---HHHHHh--ccc-CcEEEEE
Confidence 99886644 5789999999877 4443 345666 766 8877664
No 38
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.42 E-value=1e-12 Score=106.29 Aligned_cols=108 Identities=16% Similarity=0.083 Sum_probs=86.5
Q ss_pred hhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhcCCCcc
Q 042616 37 AGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGDYRGAD 114 (220)
Q Consensus 37 ~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~~~~~D 114 (220)
...+..+|||+||| +|..++.|+....+ .++|+++|.+ +.+++.|+++++ ++.++++++++|+.+......++||
T Consensus 19 ~~~~~~~vLDlGcG-~G~~~~~l~~~~~~-~~~v~~vD~s-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD 95 (197)
T 3eey_A 19 FVKEGDTVVDATCG-NGNDTAFLASLVGE-NGRVFGFDIQ-DKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVK 95 (197)
T ss_dssp HCCTTCEEEESCCT-TSHHHHHHHHHHCT-TCEEEEECSC-HHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEE
T ss_pred cCCCCCEEEEcCCC-CCHHHHHHHHHhCC-CCEEEEEECC-HHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCce
Confidence 34566899999997 99999999998754 5799999999 999999999997 5557899999999887544457899
Q ss_pred EEEEcCCC----------CCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 115 FVLIDCNI----------DIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 115 ~VfiD~~k----------~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
+|+.|..- ...++..+++.+.+. |+| ||.+++-
T Consensus 96 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--Lk~-gG~l~~~ 138 (197)
T 3eey_A 96 AVMFNLGYLPSGDHSISTRPETTIQALSKAMEL--LVT-GGIITVV 138 (197)
T ss_dssp EEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHH--EEE-EEEEEEE
T ss_pred EEEEcCCcccCcccccccCcccHHHHHHHHHHh--CcC-CCEEEEE
Confidence 99998622 002456789999998 886 7776654
No 39
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.40 E-value=2.1e-12 Score=115.19 Aligned_cols=120 Identities=18% Similarity=0.164 Sum_probs=93.2
Q ss_pred HHHHHHHh--hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc----cc-CCcEEEEEcch
Q 042616 30 EFISALAA--GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG----RY-ANCIEFVKGDA 102 (220)
Q Consensus 30 ~~L~~La~--~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~----g~-~~~Ve~v~gda 102 (220)
++|..++. ..++++||||||| +|..+..|++.. + ..+|++||++ +.+++.|++++. ++ ..+++++++|+
T Consensus 108 e~L~~l~l~~~~~~~~VLdIG~G-~G~~a~~la~~~-~-~~~V~~VDis-~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~ 183 (334)
T 1xj5_A 108 EMITHLPLCSIPNPKKVLVIGGG-DGGVLREVARHA-S-IEQIDMCEID-KMVVDVSKQFFPDVAIGYEDPRVNLVIGDG 183 (334)
T ss_dssp HHHHHHHHTTSSCCCEEEEETCS-SSHHHHHHTTCT-T-CCEEEEEESC-HHHHHHHHHHCHHHHGGGGSTTEEEEESCH
T ss_pred HHHHHHHHhhCCCCCEEEEECCC-ccHHHHHHHHcC-C-CCEEEEEECC-HHHHHHHHHHHHhhccccCCCcEEEEECCH
Confidence 44544432 3578999999997 999999998742 2 5899999999 999999999985 34 46899999999
Q ss_pred hhhhhhc-CCCccEEEEcCCCCC--cc---HHHHHHHHHhhcCCCCCCEEEEEe-cCCCCC
Q 042616 103 QKLLMGD-YRGADFVLIDCNIDI--DG---HKNVFRAAKESVMHGSGAGVIVGY-NALPKG 156 (220)
Q Consensus 103 ~~~L~~~-~~~~D~VfiD~~k~~--~~---y~~~l~~l~~~~~L~~~Ggviv~d-Nv~~~g 156 (220)
.+.++.. .++||+||+|+.... .. +.++++.+.+. |+| ||+++++ +..+.+
T Consensus 184 ~~~l~~~~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~--Lkp-gG~lv~~~~~~~~~ 241 (334)
T 1xj5_A 184 VAFLKNAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARA--LRP-GGVVCTQAESLWLH 241 (334)
T ss_dssp HHHHHTSCTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHH--EEE-EEEEEEECCCTTTC
T ss_pred HHHHHhccCCCccEEEECCCCccCcchhhhHHHHHHHHHHh--cCC-CcEEEEecCCcccc
Confidence 9988654 368999999986311 11 47899999999 876 9999986 555543
No 40
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.40 E-value=2.6e-12 Score=110.46 Aligned_cols=118 Identities=12% Similarity=0.213 Sum_probs=89.9
Q ss_pred HHHHHHHHHh--hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchh
Q 042616 28 VGEFISALAA--GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQ 103 (220)
Q Consensus 28 ~~~~L~~La~--~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~ 103 (220)
.-+++..|+. ..+..+|||+||| +|..++.|++.....+.+|++||++ +.+++.||++++ +...+|+++++|+.
T Consensus 56 ~~~~i~~l~~~~~~~~~~vLDlGcG-tG~~~~~la~~~~~~~~~v~gvD~s-~~ml~~A~~~~~~~~~~~~v~~~~~D~~ 133 (261)
T 4gek_A 56 IISMIGMLAERFVQPGTQVYDLGCS-LGAATLSVRRNIHHDNCKIIAIDNS-PAMIERCRRHIDAYKAPTPVDVIEGDIR 133 (261)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEETCT-TTHHHHHHHHTCCSSSCEEEEEESC-HHHHHHHHHHHHTSCCSSCEEEEESCTT
T ss_pred HHHHHHHHHHHhCCCCCEEEEEeCC-CCHHHHHHHHhcCCCCCEEEEEECC-HHHHHHHHHHHHhhccCceEEEeecccc
Confidence 3445555555 3466899999997 9999999999877657899999999 999999999987 56678999999998
Q ss_pred hhhhhcCCCccEEEEcCCCC---CccHHHHHHHHHhhcCCCCCCEEEE-EecCC
Q 042616 104 KLLMGDYRGADFVLIDCNID---IDGHKNVFRAAKESVMHGSGAGVIV-GYNAL 153 (220)
Q Consensus 104 ~~L~~~~~~~D~VfiD~~k~---~~~y~~~l~~l~~~~~L~~~Ggviv-~dNv~ 153 (220)
++ | .++||+|++-.... ..+...+++.+.+. |+| ||+++ .+...
T Consensus 134 ~~-~--~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~--Lkp-GG~lii~e~~~ 181 (261)
T 4gek_A 134 DI-A--IENASMVVLNFTLQFLEPSERQALLDKIYQG--LNP-GGALVLSEKFS 181 (261)
T ss_dssp TC-C--CCSEEEEEEESCGGGSCHHHHHHHHHHHHHH--EEE-EEEEEEEEEBC
T ss_pred cc-c--ccccccceeeeeeeecCchhHhHHHHHHHHH--cCC-CcEEEEEeccC
Confidence 73 3 36799998765430 02335679999999 987 66655 44443
No 41
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.39 E-value=1.4e-12 Score=111.11 Aligned_cols=130 Identities=15% Similarity=0.126 Sum_probs=102.9
Q ss_pred HHHHHHHhcCCCCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcc
Q 042616 11 KAYLQALKMGKRGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGR 90 (220)
Q Consensus 11 ~aY~~~l~~~~~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g 90 (220)
..|...++.....+.|.....+...+...+..+|||+||| +|..++.|+..+.+ +++|+++|.+ +++++.|+++++.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~-~~~v~~vD~~-~~~~~~a~~~~~~ 146 (280)
T 1i9g_A 70 VDYVMSMPRGPQVIYPKDAAQIVHEGDIFPGARVLEAGAG-SGALTLSLLRAVGP-AGQVISYEQR-ADHAEHARRNVSG 146 (280)
T ss_dssp HHHHTTSCSCSCCCCHHHHHHHHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCT-TSEEEEECSC-HHHHHHHHHHHHH
T ss_pred HHHHhhccccceeecHHHHHHHHHHcCCCCCCEEEEEccc-ccHHHHHHHHHhCC-CCEEEEEeCC-HHHHHHHHHHHHH
Confidence 4566566666667788777777777777788899999997 99999999987654 6899999999 9999999999862
Q ss_pred ----cCCcEEEEEcchhhhhhhcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEec
Q 042616 91 ----YANCIEFVKGDAQKLLMGDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYN 151 (220)
Q Consensus 91 ----~~~~Ve~v~gda~~~L~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dN 151 (220)
+.++++++++|+.+.. ...++||+||+|... ...+++.+.+. |+| ||.+++..
T Consensus 147 ~~g~~~~~v~~~~~d~~~~~-~~~~~~D~v~~~~~~----~~~~l~~~~~~--L~p-gG~l~~~~ 203 (280)
T 1i9g_A 147 CYGQPPDNWRLVVSDLADSE-LPDGSVDRAVLDMLA----PWEVLDAVSRL--LVA-GGVLMVYV 203 (280)
T ss_dssp HHTSCCTTEEEECSCGGGCC-CCTTCEEEEEEESSC----GGGGHHHHHHH--EEE-EEEEEEEE
T ss_pred hcCCCCCcEEEEECchHhcC-CCCCceeEEEECCcC----HHHHHHHHHHh--CCC-CCEEEEEe
Confidence 2478999999998752 114679999998764 44678888888 876 78777643
No 42
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.39 E-value=2.7e-12 Score=111.25 Aligned_cols=132 Identities=13% Similarity=0.102 Sum_probs=99.5
Q ss_pred hhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc---cc--------CCcEEEEEcchhhh
Q 042616 37 AGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG---RY--------ANCIEFVKGDAQKL 105 (220)
Q Consensus 37 ~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~---g~--------~~~Ve~v~gda~~~ 105 (220)
...++++||||||| +|..+..+++. + .++|++||.| +..++.|+++++ ++ ..+++++++|+.+.
T Consensus 72 ~~~~~~~VLdiG~G-~G~~~~~l~~~-~--~~~v~~vDid-~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~ 146 (281)
T 1mjf_A 72 AHPKPKRVLVIGGG-DGGTVREVLQH-D--VDEVIMVEID-EDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEF 146 (281)
T ss_dssp HSSCCCEEEEEECT-TSHHHHHHTTS-C--CSEEEEEESC-HHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHH
T ss_pred hCCCCCeEEEEcCC-cCHHHHHHHhC-C--CCEEEEEECC-HHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHH
Confidence 44678999999996 99999988875 2 6899999999 999999999982 22 36799999999998
Q ss_pred hhhcCCCccEEEEcCCCCC----cc-HHHHHHHHHhhcCCCCCCEEEEEecCC--CCCC------------cc--ceEEE
Q 042616 106 LMGDYRGADFVLIDCNIDI----DG-HKNVFRAAKESVMHGSGAGVIVGYNAL--PKGS------------WR--GYKTH 164 (220)
Q Consensus 106 L~~~~~~~D~VfiD~~k~~----~~-y~~~l~~l~~~~~L~~~Ggviv~dNv~--~~g~------------~~--~~~s~ 164 (220)
++. .++||+|++|..... .. ..++++.+.+. |+| ||++++.... .... |. .+.++
T Consensus 147 l~~-~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~--L~p-gG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~ 222 (281)
T 1mjf_A 147 IKN-NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDA--LNN-PGIYVTQAGSVYLFTDELISAYKEMKKVFDRVYYYSF 222 (281)
T ss_dssp HHH-CCCEEEEEEECCCCC-----TTSHHHHHHHHHH--EEE-EEEEEEEEEETTTSHHHHHHHHHHHHHHCSEEEEEEE
T ss_pred hcc-cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHh--cCC-CcEEEEEcCCcccCHHHHHHHHHHHHHHCCceEEEEE
Confidence 876 678999999987310 22 47889999998 876 9998886322 1110 11 45667
Q ss_pred eeecCCc---EEEEEE
Q 042616 165 FLPIGEG---LLVTRI 177 (220)
Q Consensus 165 ~lPig~G---l~v~~~ 177 (220)
.+|.++| +.++.+
T Consensus 223 ~vP~~~g~~~~~~as~ 238 (281)
T 1mjf_A 223 PVIGYASPWAFLVGVK 238 (281)
T ss_dssp CCTTSSSSEEEEEEEE
T ss_pred ecCCCCceEEEEEeeC
Confidence 7899877 455544
No 43
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.38 E-value=2.1e-12 Score=108.29 Aligned_cols=116 Identities=15% Similarity=0.060 Sum_probs=91.4
Q ss_pred HHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhh
Q 042616 28 VGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKL 105 (220)
Q Consensus 28 ~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~ 105 (220)
...++..+....+..+||||||| +|..++.|+...+ ++|+++|++ +.+++.|++++. ++.++++++++|+.+.
T Consensus 34 ~~~~l~~l~~~~~~~~vLDiG~G-~G~~~~~l~~~~~---~~v~~vD~s-~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 108 (257)
T 3f4k_A 34 TRKAVSFINELTDDAKIADIGCG-TGGQTLFLADYVK---GQITGIDLF-PDFIEIFNENAVKANCADRVKGITGSMDNL 108 (257)
T ss_dssp HHHHHTTSCCCCTTCEEEEETCT-TSHHHHHHHHHCC---SEEEEEESC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSC
T ss_pred HHHHHHHHhcCCCCCeEEEeCCC-CCHHHHHHHHhCC---CeEEEEECC-HHHHHHHHHHHHHcCCCCceEEEECChhhC
Confidence 34444444445567899999997 9999999998753 499999999 999999999987 7767899999999663
Q ss_pred hhhcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 106 LMGDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 106 L~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
+...++||+|+.......-+....++.+.+. |+| ||.+++.+.
T Consensus 109 -~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~--L~p-gG~l~~~~~ 151 (257)
T 3f4k_A 109 -PFQNEELDLIWSEGAIYNIGFERGMNEWSKY--LKK-GGFIAVSEA 151 (257)
T ss_dssp -SSCTTCEEEEEEESCSCCCCHHHHHHHHHTT--EEE-EEEEEEEEE
T ss_pred -CCCCCCEEEEEecChHhhcCHHHHHHHHHHH--cCC-CcEEEEEEe
Confidence 3324789999988765334678899999998 887 787777654
No 44
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.38 E-value=4.7e-12 Score=112.40 Aligned_cols=107 Identities=12% Similarity=0.050 Sum_probs=86.8
Q ss_pred CCCC--EEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc-ccCCcEEEEEcchhhhhhhc-CCCcc
Q 042616 39 NNAQ--LIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG-RYANCIEFVKGDAQKLLMGD-YRGAD 114 (220)
Q Consensus 39 ~~a~--~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~-g~~~~Ve~v~gda~~~L~~~-~~~~D 114 (220)
-+++ +||||||| .|+.+.+|++..+ +.+|++||+| +++++.||+++. ....+++++++|+.+++... .++||
T Consensus 86 p~p~~~rVLdIG~G-~G~la~~la~~~p--~~~v~~VEid-p~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fD 161 (317)
T 3gjy_A 86 QDASKLRITHLGGG-ACTMARYFADVYP--QSRNTVVELD-AELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRD 161 (317)
T ss_dssp SCGGGCEEEEESCG-GGHHHHHHHHHST--TCEEEEEESC-HHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEE
T ss_pred CCCCCCEEEEEECC-cCHHHHHHHHHCC--CcEEEEEECC-HHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCC
Confidence 3445 99999986 9999999998654 4699999999 999999999997 33468999999999998654 36899
Q ss_pred EEEEcCCCCC----cc-HHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 115 FVLIDCNIDI----DG-HKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 115 ~VfiD~~k~~----~~-y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
+||+|..... .. ..++++.+.+. |+| ||++++...
T Consensus 162 vIi~D~~~~~~~~~~L~t~efl~~~~r~--Lkp-gGvlv~~~~ 201 (317)
T 3gjy_A 162 VIIRDVFAGAITPQNFTTVEFFEHCHRG--LAP-GGLYVANCG 201 (317)
T ss_dssp EEEECCSTTSCCCGGGSBHHHHHHHHHH--EEE-EEEEEEEEE
T ss_pred EEEECCCCccccchhhhHHHHHHHHHHh--cCC-CcEEEEEec
Confidence 9999975411 11 17889999999 886 999888654
No 45
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.38 E-value=2.2e-12 Score=109.59 Aligned_cols=114 Identities=17% Similarity=0.076 Sum_probs=92.3
Q ss_pred HHHHHHHHHhhC-CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhh
Q 042616 28 VGEFISALAAGN-NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQK 104 (220)
Q Consensus 28 ~~~~L~~La~~~-~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~ 104 (220)
.+.+|..++... +..+|||+||| +|..++.|+... .++|++||.+ +.+++.|++++. ++.++++++++|+.+
T Consensus 36 d~~ll~~~~~~~~~~~~vLDlG~G-~G~~~~~la~~~---~~~v~gvDi~-~~~~~~a~~n~~~~~~~~~v~~~~~D~~~ 110 (259)
T 3lpm_A 36 DAVLLAKFSYLPIRKGKIIDLCSG-NGIIPLLLSTRT---KAKIVGVEIQ-ERLADMAKRSVAYNQLEDQIEIIEYDLKK 110 (259)
T ss_dssp HHHHHHHHCCCCSSCCEEEETTCT-TTHHHHHHHTTC---CCEEEEECCS-HHHHHHHHHHHHHTTCTTTEEEECSCGGG
T ss_pred HHHHHHHHhcCCCCCCEEEEcCCc-hhHHHHHHHHhc---CCcEEEEECC-HHHHHHHHHHHHHCCCcccEEEEECcHHH
Confidence 377888888777 78999999997 999999888752 3499999999 999999999997 777789999999999
Q ss_pred hhhhc-CCCccEEEEcCCCCC---------------------ccHHHHHHHHHhhcCCCCCCEEEEE
Q 042616 105 LLMGD-YRGADFVLIDCNIDI---------------------DGHKNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 105 ~L~~~-~~~~D~VfiD~~k~~---------------------~~y~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
..+.+ .++||+|+.|.+-.. ..+..+++.+.+. |+| ||.+++
T Consensus 111 ~~~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~--Lkp-gG~l~~ 174 (259)
T 3lpm_A 111 ITDLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASL--LKQ-GGKANF 174 (259)
T ss_dssp GGGTSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHH--EEE-EEEEEE
T ss_pred hhhhhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHH--ccC-CcEEEE
Confidence 77544 478999999865200 1245788999998 886 777666
No 46
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.38 E-value=2.5e-12 Score=113.31 Aligned_cols=128 Identities=13% Similarity=0.101 Sum_probs=98.6
Q ss_pred hhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc----c-c-CCcEEEEEcchhhhhhhcC
Q 042616 37 AGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG----R-Y-ANCIEFVKGDAQKLLMGDY 110 (220)
Q Consensus 37 ~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~----g-~-~~~Ve~v~gda~~~L~~~~ 110 (220)
...++++||||||| +|..+..+++.. ...+|++||+| +.+++.|++++. + + ..+++++++|+.+.++...
T Consensus 74 ~~~~~~~VLdiG~G-~G~~~~~l~~~~--~~~~v~~vDid-~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~ 149 (314)
T 1uir_A 74 THPEPKRVLIVGGG-EGATLREVLKHP--TVEKAVMVDID-GELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTE 149 (314)
T ss_dssp HSSCCCEEEEEECT-TSHHHHHHTTST--TCCEEEEEESC-HHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCC
T ss_pred cCCCCCeEEEEcCC-cCHHHHHHHhcC--CCCEEEEEECC-HHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcC
Confidence 34578999999996 999999888742 26799999999 999999999985 2 3 4689999999999887656
Q ss_pred CCccEEEEcCCCCCcc----------HHHHHHHHHhhcCCCCCCEEEEEecCC---CCC------------Ccc--ceEE
Q 042616 111 RGADFVLIDCNIDIDG----------HKNVFRAAKESVMHGSGAGVIVGYNAL---PKG------------SWR--GYKT 163 (220)
Q Consensus 111 ~~~D~VfiD~~k~~~~----------y~~~l~~l~~~~~L~~~Ggviv~dNv~---~~g------------~~~--~~~s 163 (220)
++||+|++|... .. ..++++.+.+. |+| ||++++.... .+. .|. .+.+
T Consensus 150 ~~fD~Ii~d~~~--~~~~~~~~~~l~~~~~l~~~~~~--Lkp-gG~lv~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~ 224 (314)
T 1uir_A 150 ERYDVVIIDLTD--PVGEDNPARLLYTVEFYRLVKAH--LNP-GGVMGMQTGMILLTHHRVHPVVHRTVREAFRYVRSYK 224 (314)
T ss_dssp CCEEEEEEECCC--CBSTTCGGGGGSSHHHHHHHHHT--EEE-EEEEEEEEEEECC---CHHHHHHHHHHTTCSEEEEEE
T ss_pred CCccEEEECCCC--cccccCcchhccHHHHHHHHHHh--cCC-CcEEEEEccCccccCHHHHHHHHHHHHHHCCceEEEE
Confidence 789999999876 33 47899999998 886 8888875221 111 121 4566
Q ss_pred EeeecCCcEE
Q 042616 164 HFLPIGEGLL 173 (220)
Q Consensus 164 ~~lPig~Gl~ 173 (220)
+.+|.++|..
T Consensus 225 ~~vP~~~g~~ 234 (314)
T 1uir_A 225 NHIPGFFLNF 234 (314)
T ss_dssp EEEGGGTEEE
T ss_pred EecCCCCCeE
Confidence 7889988743
No 47
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.38 E-value=2.4e-12 Score=107.80 Aligned_cols=120 Identities=10% Similarity=-0.028 Sum_probs=93.9
Q ss_pred CCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEE
Q 042616 22 RGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVK 99 (220)
Q Consensus 22 ~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~ 99 (220)
....+...+.+...+...+..+||||||| +|..+..|+... +.+|+++|++ +.+++.|+++++ ++.+++++++
T Consensus 18 ~~~~~~~~~~l~~~~~~~~~~~VLDiGcG-~G~~~~~la~~~---~~~v~gvD~s-~~~l~~a~~~~~~~~~~~~v~~~~ 92 (256)
T 1nkv_A 18 NPFTEEKYATLGRVLRMKPGTRILDLGSG-SGEMLCTWARDH---GITGTGIDMS-SLFTAQAKRRAEELGVSERVHFIH 92 (256)
T ss_dssp SSCCHHHHHHHHHHTCCCTTCEEEEETCT-TCHHHHHHHHHT---CCEEEEEESC-HHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred CCCCHHHHHHHHHhcCCCCCCEEEEECCC-CCHHHHHHHHhc---CCeEEEEeCC-HHHHHHHHHHHHhcCCCcceEEEE
Confidence 44555666666666666778899999997 899999999864 5699999999 999999999986 6767899999
Q ss_pred cchhhhhhhcCCCccEEEEcCCC-CCccHHHHHHHHHhhcCCCCCCEEEEEec
Q 042616 100 GDAQKLLMGDYRGADFVLIDCNI-DIDGHKNVFRAAKESVMHGSGAGVIVGYN 151 (220)
Q Consensus 100 gda~~~L~~~~~~~D~VfiD~~k-~~~~y~~~l~~l~~~~~L~~~Ggviv~dN 151 (220)
+|+.+.. . .++||+|+.-... ...+....++.+.+. |+| ||.+++.+
T Consensus 93 ~d~~~~~-~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~--Lkp-gG~l~~~~ 140 (256)
T 1nkv_A 93 NDAAGYV-A-NEKCDVAACVGATWIAGGFAGAEELLAQS--LKP-GGIMLIGE 140 (256)
T ss_dssp SCCTTCC-C-SSCEEEEEEESCGGGTSSSHHHHHHHTTS--EEE-EEEEEEEE
T ss_pred CChHhCC-c-CCCCCEEEECCChHhcCCHHHHHHHHHHH--cCC-CeEEEEec
Confidence 9998854 3 5789999974332 113567889999998 887 77766643
No 48
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.38 E-value=3.9e-12 Score=106.03 Aligned_cols=128 Identities=9% Similarity=-0.013 Sum_probs=100.0
Q ss_pred hhHHHHHHH-HhcCCCCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHH
Q 042616 8 NATKAYLQA-LKMGKRGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKK 86 (220)
Q Consensus 8 ~a~~aY~~~-l~~~~~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~ 86 (220)
.....+.+. +......+.|....++...+...+..+|||+||| +|..++.++.. +++|+++|.+ +++++.|++
T Consensus 58 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vldiG~G-~G~~~~~l~~~----~~~v~~vD~~-~~~~~~a~~ 131 (248)
T 2yvl_A 58 PTLEEIILLGFERKTQIIYPKDSFYIALKLNLNKEKRVLEFGTG-SGALLAVLSEV----AGEVWTFEAV-EEFYKTAQK 131 (248)
T ss_dssp CCHHHHHHHTSCCSSCCCCHHHHHHHHHHTTCCTTCEEEEECCT-TSHHHHHHHHH----SSEEEEECSC-HHHHHHHHH
T ss_pred CCHHHHHHhcCcCCCCcccchhHHHHHHhcCCCCCCEEEEeCCC-ccHHHHHHHHh----CCEEEEEecC-HHHHHHHHH
Confidence 334455544 3334456778888888777777788999999997 89999999986 5799999999 999999999
Q ss_pred Hhc--ccCCcEEEEEcchhhhh-hhcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 87 SLG--RYANCIEFVKGDAQKLL-MGDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 87 ~l~--g~~~~Ve~v~gda~~~L-~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
+++ ++.++++++.+|+.+.. + .++||+||.|.+. ....++.+.+. |+| ||.+++.
T Consensus 132 ~~~~~~~~~~~~~~~~d~~~~~~~--~~~~D~v~~~~~~----~~~~l~~~~~~--L~~-gG~l~~~ 189 (248)
T 2yvl_A 132 NLKKFNLGKNVKFFNVDFKDAEVP--EGIFHAAFVDVRE----PWHYLEKVHKS--LME-GAPVGFL 189 (248)
T ss_dssp HHHHTTCCTTEEEECSCTTTSCCC--TTCBSEEEECSSC----GGGGHHHHHHH--BCT-TCEEEEE
T ss_pred HHHHcCCCCcEEEEEcChhhcccC--CCcccEEEECCcC----HHHHHHHHHHH--cCC-CCEEEEE
Confidence 986 66578999999998855 3 3679999997654 44678888888 877 6665553
No 49
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.36 E-value=3.3e-12 Score=100.17 Aligned_cols=99 Identities=9% Similarity=-0.017 Sum_probs=79.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhc---CCCcc
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGD---YRGAD 114 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~---~~~~D 114 (220)
+.++|||+||| +|..++.++.. +.+|+++|.+ +++++.|++++. ++ +++++++|+.+.++.. .++||
T Consensus 41 ~~~~vLD~GcG-~G~~~~~l~~~----~~~v~~vD~~-~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~D 112 (171)
T 1ws6_A 41 RRGRFLDPFAG-SGAVGLEAASE----GWEAVLVEKD-PEAVRLLKENVRRTGL--GARVVALPVEVFLPEAKAQGERFT 112 (171)
T ss_dssp TCCEEEEETCS-SCHHHHHHHHT----TCEEEEECCC-HHHHHHHHHHHHHHTC--CCEEECSCHHHHHHHHHHTTCCEE
T ss_pred CCCeEEEeCCC-cCHHHHHHHHC----CCeEEEEeCC-HHHHHHHHHHHHHcCC--ceEEEeccHHHHHHhhhccCCceE
Confidence 77899999997 99999999875 3459999999 999999999997 44 7999999999876543 23799
Q ss_pred EEEEcCCCCCccHHHHHHHHH--hhcCCCCCCEEEEEe
Q 042616 115 FVLIDCNIDIDGHKNVFRAAK--ESVMHGSGAGVIVGY 150 (220)
Q Consensus 115 ~VfiD~~k~~~~y~~~l~~l~--~~~~L~~~Ggviv~d 150 (220)
+|+.|.... ....+.++.+. +. |+| ||++++.
T Consensus 113 ~i~~~~~~~-~~~~~~~~~~~~~~~--L~~-gG~~~~~ 146 (171)
T 1ws6_A 113 VAFMAPPYA-MDLAALFGELLASGL--VEA-GGLYVLQ 146 (171)
T ss_dssp EEEECCCTT-SCTTHHHHHHHHHTC--EEE-EEEEEEE
T ss_pred EEEECCCCc-hhHHHHHHHHHhhcc--cCC-CcEEEEE
Confidence 999997653 45567777777 66 776 7777664
No 50
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.36 E-value=3.7e-12 Score=113.28 Aligned_cols=115 Identities=15% Similarity=0.101 Sum_probs=88.8
Q ss_pred HHHHHHh-hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCC-cEEEEEcchhhhh
Q 042616 31 FISALAA-GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYAN-CIEFVKGDAQKLL 106 (220)
Q Consensus 31 ~L~~La~-~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~-~Ve~v~gda~~~L 106 (220)
++..++. ..+.++|||+||| +|..++.+|.. +.+|++||.+ +.+++.|++|++ ++.+ +++++++|+.+++
T Consensus 143 ~l~~~~~~~~~~~~VLDlgcG-tG~~sl~la~~----ga~V~~VD~s-~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l 216 (332)
T 2igt_A 143 WLKNAVETADRPLKVLNLFGY-TGVASLVAAAA----GAEVTHVDAS-KKAIGWAKENQVLAGLEQAPIRWICEDAMKFI 216 (332)
T ss_dssp HHHHHHHHSSSCCEEEEETCT-TCHHHHHHHHT----TCEEEEECSC-HHHHHHHHHHHHHHTCTTSCEEEECSCHHHHH
T ss_pred HHHHHHHhcCCCCcEEEcccc-cCHHHHHHHHc----CCEEEEEECC-HHHHHHHHHHHHHcCCCccceEEEECcHHHHH
Confidence 3455544 3456799999997 99999999873 4599999999 999999999997 6654 5999999999987
Q ss_pred hhc---CCCccEEEEcCCCCC-----------ccHHHHHHHHHhhcCCCCCCEEEEEecCCC
Q 042616 107 MGD---YRGADFVLIDCNIDI-----------DGHKNVFRAAKESVMHGSGAGVIVGYNALP 154 (220)
Q Consensus 107 ~~~---~~~~D~VfiD~~k~~-----------~~y~~~l~~l~~~~~L~~~Ggviv~dNv~~ 154 (220)
+.. ...||+|++|.+.-. ..|.++++.+.+. |+| ||++++.+...
T Consensus 217 ~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~--Lkp-gG~lli~~~~~ 275 (332)
T 2igt_A 217 QREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREI--LSP-KALGLVLTAYS 275 (332)
T ss_dssp HHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHT--BCT-TCCEEEEEECC
T ss_pred HHHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHh--cCc-CcEEEEEECCC
Confidence 643 468999999987300 2367888888888 876 88766655443
No 51
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.36 E-value=4.1e-12 Score=108.33 Aligned_cols=131 Identities=10% Similarity=-0.018 Sum_probs=96.4
Q ss_pred hHHHHHHHHhcCCC------CCChhH---HHHHHHHHhh-----CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEe
Q 042616 9 ATKAYLQALKMGKR------GKEPDV---GEFISALAAG-----NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCIL 74 (220)
Q Consensus 9 a~~aY~~~l~~~~~------~~~p~~---~~~L~~La~~-----~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE 74 (220)
..+.|.+.+..... +.+++. -.|+..+... .++.+||||||| +|+.++.||...+ +++|++||
T Consensus 35 ~~~~~~~~l~~~~~~~nl~~i~~~~~~~~~~~~ds~~~l~~~~~~~~~~vLDiG~G-~G~~~i~la~~~~--~~~v~~vD 111 (249)
T 3g89_A 35 AFSRLYALLQEASGKVNLTALRGEEEVVVKHFLDSLTLLRLPLWQGPLRVLDLGTG-AGFPGLPLKIVRP--ELELVLVD 111 (249)
T ss_dssp HHHHHHHHHHHC----------CHHHHHHHHHHHHHGGGGSSCCCSSCEEEEETCT-TTTTHHHHHHHCT--TCEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCCceECCHHHHhhceeeechhhhcccccCCCCEEEEEcCC-CCHHHHHHHHHCC--CCEEEEEE
Confidence 45677777666431 223222 1233333322 357899999997 9999999998764 68999999
Q ss_pred CCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhh--cCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 75 SGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMG--DYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 75 ~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~--~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
++ +++++.|+++++ ++ .+|+++++|++++.+. ..++||+|+..+- .++..+++.+.+. |+| ||.+++-
T Consensus 112 ~s-~~~~~~a~~~~~~~~l-~~v~~~~~d~~~~~~~~~~~~~fD~I~s~a~---~~~~~ll~~~~~~--Lkp-gG~l~~~ 183 (249)
T 3g89_A 112 AT-RKKVAFVERAIEVLGL-KGARALWGRAEVLAREAGHREAYARAVARAV---APLCVLSELLLPF--LEV-GGAAVAM 183 (249)
T ss_dssp SC-HHHHHHHHHHHHHHTC-SSEEEEECCHHHHTTSTTTTTCEEEEEEESS---CCHHHHHHHHGGG--EEE-EEEEEEE
T ss_pred CC-HHHHHHHHHHHHHhCC-CceEEEECcHHHhhcccccCCCceEEEECCc---CCHHHHHHHHHHH--cCC-CeEEEEE
Confidence 99 999999999997 66 4599999999987542 2368999999875 4678899999998 886 8876653
No 52
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.36 E-value=2.7e-12 Score=108.78 Aligned_cols=115 Identities=15% Similarity=0.083 Sum_probs=90.1
Q ss_pred HHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhh
Q 042616 30 EFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLM 107 (220)
Q Consensus 30 ~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~ 107 (220)
.++..+....++.+||||||| +|..++.|+.. .+++|++||++ +.+++.|+++++ ++.++++++++|+.+. +
T Consensus 36 ~~l~~l~~~~~~~~vLDiGcG-~G~~~~~la~~---~~~~v~gvD~s-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~ 109 (267)
T 3kkz_A 36 KALSFIDNLTEKSLIADIGCG-TGGQTMVLAGH---VTGQVTGLDFL-SGFIDIFNRNARQSGLQNRVTGIVGSMDDL-P 109 (267)
T ss_dssp HHHTTCCCCCTTCEEEEETCT-TCHHHHHHHTT---CSSEEEEEESC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSC-C
T ss_pred HHHHhcccCCCCCEEEEeCCC-CCHHHHHHHhc---cCCEEEEEeCC-HHHHHHHHHHHHHcCCCcCcEEEEcChhhC-C
Confidence 334333334567899999997 99999999875 25799999999 999999999987 7777899999999773 3
Q ss_pred hcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 108 GDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 108 ~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
...++||+|+....-..-+...+++.+.+. |+| ||.+++.+..
T Consensus 110 ~~~~~fD~i~~~~~~~~~~~~~~l~~~~~~--Lkp-gG~l~~~~~~ 152 (267)
T 3kkz_A 110 FRNEELDLIWSEGAIYNIGFERGLNEWRKY--LKK-GGYLAVSECS 152 (267)
T ss_dssp CCTTCEEEEEESSCGGGTCHHHHHHHHGGG--EEE-EEEEEEEEEE
T ss_pred CCCCCEEEEEEcCCceecCHHHHHHHHHHH--cCC-CCEEEEEEee
Confidence 224789999987765223568889999998 886 8887776553
No 53
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.36 E-value=2.7e-12 Score=110.61 Aligned_cols=114 Identities=14% Similarity=0.038 Sum_probs=91.5
Q ss_pred CChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcc
Q 042616 24 KEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGD 101 (220)
Q Consensus 24 ~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gd 101 (220)
..+...+.+..+....+.++|||+||| +|..++.||...+ .++|++||.+ +++++.|++|++ ++ ++++++++|
T Consensus 103 ~~~~~~e~~~~~~~~~~~~~VLDlgcG-~G~~s~~la~~~~--~~~V~~vD~s-~~av~~a~~n~~~n~l-~~~~~~~~d 177 (272)
T 3a27_A 103 SQGNIEERKRMAFISNENEVVVDMFAG-IGYFTIPLAKYSK--PKLVYAIEKN-PTAYHYLCENIKLNKL-NNVIPILAD 177 (272)
T ss_dssp CGGGHHHHHHHHTSCCTTCEEEETTCT-TTTTHHHHHHHTC--CSEEEEEECC-HHHHHHHHHHHHHTTC-SSEEEEESC
T ss_pred CCCchHHHHHHHHhcCCCCEEEEecCc-CCHHHHHHHHhCC--CCEEEEEeCC-HHHHHHHHHHHHHcCC-CCEEEEECC
Confidence 344455556555556677899999997 9999999998754 5799999999 999999999997 55 568999999
Q ss_pred hhhhhhhcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 102 AQKLLMGDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 102 a~~~L~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
+.+. +. .+.||+|++|.+. .+.+.++.+.+. |+| ||++++.
T Consensus 178 ~~~~-~~-~~~~D~Vi~d~p~---~~~~~l~~~~~~--Lkp-gG~l~~s 218 (272)
T 3a27_A 178 NRDV-EL-KDVADRVIMGYVH---KTHKFLDKTFEF--LKD-RGVIHYH 218 (272)
T ss_dssp GGGC-CC-TTCEEEEEECCCS---SGGGGHHHHHHH--EEE-EEEEEEE
T ss_pred hHHc-Cc-cCCceEEEECCcc---cHHHHHHHHHHH--cCC-CCEEEEE
Confidence 9987 54 5689999999876 566778888887 876 7776554
No 54
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.36 E-value=3.4e-12 Score=109.91 Aligned_cols=123 Identities=13% Similarity=0.065 Sum_probs=96.3
Q ss_pred CChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcc
Q 042616 24 KEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGD 101 (220)
Q Consensus 24 ~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gd 101 (220)
+......++..++...+..+|||+||| +|..|+.|+..++. .++|+++|.+ +.+++.++++++ ++ .+++++++|
T Consensus 67 ~qd~~s~l~~~~l~~~~g~~VLDlgaG-~G~~t~~la~~~~~-~~~v~avD~~-~~~l~~~~~~~~~~g~-~~v~~~~~D 142 (274)
T 3ajd_A 67 PQSISSMIPPIVLNPREDDFILDMCAA-PGGKTTHLAQLMKN-KGTIVAVEIS-KTRTKALKSNINRMGV-LNTIIINAD 142 (274)
T ss_dssp ECCSGGGHHHHHHCCCTTCEEEETTCT-TCHHHHHHHHHTTT-CSEEEEEESC-HHHHHHHHHHHHHTTC-CSEEEEESC
T ss_pred EeCHHHHHHHHHhCCCCcCEEEEeCCC-ccHHHHHHHHHcCC-CCEEEEECCC-HHHHHHHHHHHHHhCC-CcEEEEeCC
Confidence 444455666667777788999999996 99999999987653 5899999999 999999999997 66 489999999
Q ss_pred hhhhhhhc---CCCccEEEEcCCCCC-------------------ccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 102 AQKLLMGD---YRGADFVLIDCNIDI-------------------DGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 102 a~~~L~~~---~~~~D~VfiD~~k~~-------------------~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
+.+..+.. .+.||+|++|++-.. ..+..+++.+.+. |+| ||.++.....
T Consensus 143 ~~~~~~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~--Lkp-gG~lv~stcs 213 (274)
T 3ajd_A 143 MRKYKDYLLKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDL--LKK-DGELVYSTCS 213 (274)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHH--EEE-EEEEEEEESC
T ss_pred hHhcchhhhhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHh--CCC-CCEEEEEECC
Confidence 98875421 468999999955311 2347788988888 876 8887775544
No 55
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.35 E-value=8.3e-12 Score=103.25 Aligned_cols=118 Identities=7% Similarity=-0.034 Sum_probs=88.7
Q ss_pred CCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEc
Q 042616 23 GKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKG 100 (220)
Q Consensus 23 ~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~g 100 (220)
.+++...++|.......+.++|||+|||.+|..++.|+... +++|+++|.+ +.+++.|+++++ ++ +++++++
T Consensus 38 ~~p~~~~~~l~~~~~~~~~~~vLDlG~G~~G~~~~~la~~~---~~~v~~vD~s-~~~~~~a~~~~~~~~~--~v~~~~~ 111 (230)
T 3evz_A 38 LVTTPISRYIFLKTFLRGGEVALEIGTGHTAMMALMAEKFF---NCKVTATEVD-EEFFEYARRNIERNNS--NVRLVKS 111 (230)
T ss_dssp CCCCHHHHHHHHHTTCCSSCEEEEECCTTTCHHHHHHHHHH---CCEEEEEECC-HHHHHHHHHHHHHTTC--CCEEEEC
T ss_pred EeCCCchhhhHhHhhcCCCCEEEEcCCCHHHHHHHHHHHhc---CCEEEEEECC-HHHHHHHHHHHHHhCC--CcEEEeC
Confidence 34444567764444456789999999832899999999864 5799999999 999999999997 44 7999999
Q ss_pred chhhhhhhcCCCccEEEEcCCCC--------------------CccHHHHHHHHHhhcCCCCCCEEEEE
Q 042616 101 DAQKLLMGDYRGADFVLIDCNID--------------------IDGHKNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 101 da~~~L~~~~~~~D~VfiD~~k~--------------------~~~y~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
|+....+...++||+|+.+.+-. ...+..+++.+.+. |+| ||.+++
T Consensus 112 d~~~~~~~~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--Lkp-gG~l~~ 177 (230)
T 3evz_A 112 NGGIIKGVVEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDH--LNP-GGKVAL 177 (230)
T ss_dssp SSCSSTTTCCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGG--EEE-EEEEEE
T ss_pred CchhhhhcccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHH--hCC-CeEEEE
Confidence 97543322237899999985420 02257889999998 886 888776
No 56
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.35 E-value=4.5e-12 Score=111.62 Aligned_cols=127 Identities=9% Similarity=0.039 Sum_probs=99.1
Q ss_pred CCCCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEE
Q 042616 20 GKRGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEF 97 (220)
Q Consensus 20 ~~~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~ 97 (220)
+...+....+.++..++...+..+|||+||| +|..|+.||..++. .++|+++|.+ +.+++.++++++ ++ .+|++
T Consensus 98 G~~~~qd~~s~l~~~~l~~~~g~~VLDlg~G-~G~~t~~la~~~~~-~~~v~avD~s-~~~l~~a~~~~~~~g~-~~v~~ 173 (315)
T 1ixk_A 98 GLIYIQEASSMYPPVALDPKPGEIVADMAAA-PGGKTSYLAQLMRN-DGVIYAFDVD-ENRLRETRLNLSRLGV-LNVIL 173 (315)
T ss_dssp TSEEECCHHHHHHHHHHCCCTTCEEEECCSS-CSHHHHHHHHHTTT-CSEEEEECSC-HHHHHHHHHHHHHHTC-CSEEE
T ss_pred ceEEEeCHHHHHHHHHhCCCCCCEEEEeCCC-CCHHHHHHHHHhCC-CCEEEEEcCC-HHHHHHHHHHHHHhCC-CeEEE
Confidence 3344555566777777777888999999996 99999999988764 6899999999 999999999997 66 47999
Q ss_pred EEcchhhhhhhcCCCccEEEEcCCCCC-------c----------------cHHHHHHHHHhhcCCCCCCEEEEEecCCC
Q 042616 98 VKGDAQKLLMGDYRGADFVLIDCNIDI-------D----------------GHKNVFRAAKESVMHGSGAGVIVGYNALP 154 (220)
Q Consensus 98 v~gda~~~L~~~~~~~D~VfiD~~k~~-------~----------------~y~~~l~~l~~~~~L~~~Ggviv~dNv~~ 154 (220)
+++|+.++.+ ..+.||+|++|++-.. . .+..+++.+.+. |+| ||.+|......
T Consensus 174 ~~~D~~~~~~-~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~--Lkp-GG~lv~stcs~ 249 (315)
T 1ixk_A 174 FHSSSLHIGE-LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEV--LKP-GGILVYSTCSL 249 (315)
T ss_dssp ESSCGGGGGG-GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHH--EEE-EEEEEEEESCC
T ss_pred EECChhhccc-ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHh--CCC-CCEEEEEeCCC
Confidence 9999988653 3568999999976200 0 014778888888 876 88888765543
No 57
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.35 E-value=5.2e-12 Score=110.37 Aligned_cols=107 Identities=12% Similarity=0.095 Sum_probs=85.1
Q ss_pred hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc----cc-CCcEEEEEcchhhhhhhcCCC
Q 042616 38 GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG----RY-ANCIEFVKGDAQKLLMGDYRG 112 (220)
Q Consensus 38 ~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~----g~-~~~Ve~v~gda~~~L~~~~~~ 112 (220)
..++++||||||| +|..+..+++..+ .++|++||.| +.+++.|++++. ++ ..+++++++|+.+.++...++
T Consensus 88 ~~~~~~VLdiG~G-~G~~~~~l~~~~~--~~~v~~vDid-~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~ 163 (296)
T 1inl_A 88 HPNPKKVLIIGGG-DGGTLREVLKHDS--VEKAILCEVD-GLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNE 163 (296)
T ss_dssp SSSCCEEEEEECT-TCHHHHHHTTSTT--CSEEEEEESC-HHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSC
T ss_pred CCCCCEEEEEcCC-cCHHHHHHHhcCC--CCEEEEEECC-HHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCC
Confidence 4567999999996 8999998886422 5899999999 999999999984 33 468999999999988665578
Q ss_pred ccEEEEcCCCC-Cc-----cHHHHHHHHHhhcCCCCCCEEEEEec
Q 042616 113 ADFVLIDCNID-ID-----GHKNVFRAAKESVMHGSGAGVIVGYN 151 (220)
Q Consensus 113 ~D~VfiD~~k~-~~-----~y~~~l~~l~~~~~L~~~Ggviv~dN 151 (220)
||+|++|.... .. ...++++.+.+. |+| ||++++..
T Consensus 164 fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~--Lkp-gG~lv~~~ 205 (296)
T 1inl_A 164 FDVIIIDSTDPTAGQGGHLFTEEFYQACYDA--LKE-DGVFSAET 205 (296)
T ss_dssp EEEEEEEC----------CCSHHHHHHHHHH--EEE-EEEEEEEC
T ss_pred ceEEEEcCCCcccCchhhhhHHHHHHHHHHh--cCC-CcEEEEEc
Confidence 99999998651 01 237889999998 886 99988863
No 58
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.35 E-value=3.5e-12 Score=105.45 Aligned_cols=116 Identities=6% Similarity=-0.026 Sum_probs=88.2
Q ss_pred CCChhHHHHHHHHH--hhCCCCEEEEEcCCchHHHHHHHHHHcC----CCCcEEEEEeCCchhHHHHHHHHhc--cc---
Q 042616 23 GKEPDVGEFISALA--AGNNAQLIVMACSSIAVSRTLALVAAAR----QTGGRVVCILSGVIGDIDASKKSLG--RY--- 91 (220)
Q Consensus 23 ~~~p~~~~~L~~La--~~~~a~~ILEIGtg~~G~sTl~LA~A~~----~~~grV~tIE~d~~~~~~~Ar~~l~--g~--- 91 (220)
+..|...+.+..++ ...+..+||||||| +|+.++.|+.... + .++|+++|.+ +++++.|+++++ ++
T Consensus 61 ~~~p~~~~~~~~~l~~~~~~~~~VLdiG~G-~G~~~~~la~~~~~~~~~-~~~v~~vD~~-~~~~~~a~~~~~~~~~~~~ 137 (227)
T 2pbf_A 61 ISAPHMHALSLKRLINVLKPGSRAIDVGSG-SGYLTVCMAIKMNVLENK-NSYVIGLERV-KDLVNFSLENIKRDKPELL 137 (227)
T ss_dssp ECCHHHHHHHHHHHTTTSCTTCEEEEESCT-TSHHHHHHHHHTTTTTCT-TCEEEEEESC-HHHHHHHHHHHHHHCGGGG
T ss_pred cCChHHHHHHHHHHHhhCCCCCEEEEECCC-CCHHHHHHHHHhcccCCC-CCEEEEEeCC-HHHHHHHHHHHHHcCcccc
Confidence 34555554444444 35667899999997 8999999998764 3 5799999999 999999999987 42
Q ss_pred -CCcEEEEEcchhhhh----hhcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 92 -ANCIEFVKGDAQKLL----MGDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 92 -~~~Ve~v~gda~~~L----~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
.++++++++|+.+.. +. .++||+|++++.. ... ++.+.+. |+| ||++++.
T Consensus 138 ~~~~v~~~~~d~~~~~~~~~~~-~~~fD~I~~~~~~--~~~---~~~~~~~--Lkp-gG~lv~~ 192 (227)
T 2pbf_A 138 KIDNFKIIHKNIYQVNEEEKKE-LGLFDAIHVGASA--SEL---PEILVDL--LAE-NGKLIIP 192 (227)
T ss_dssp SSTTEEEEECCGGGCCHHHHHH-HCCEEEEEECSBB--SSC---CHHHHHH--EEE-EEEEEEE
T ss_pred ccCCEEEEECChHhcccccCcc-CCCcCEEEECCch--HHH---HHHHHHh--cCC-CcEEEEE
Confidence 368999999998754 22 4689999999887 443 4666776 766 8887764
No 59
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.34 E-value=1.6e-12 Score=111.57 Aligned_cols=127 Identities=9% Similarity=0.046 Sum_probs=88.1
Q ss_pred HHHHHHhcCCCCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhccc
Q 042616 12 AYLQALKMGKRGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRY 91 (220)
Q Consensus 12 aY~~~l~~~~~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~ 91 (220)
.|+..+......+.|...+++..++...+..+|||+||| +|..++.|+..+.+ +++|+++|.+ +++++.|+++++..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VLD~G~G-~G~~~~~la~~~~~-~~~v~~vD~s-~~~~~~a~~~~~~~ 158 (275)
T 1yb2_A 82 YFGRVIRRNTQIISEIDASYIIMRCGLRPGMDILEVGVG-SGNMSSYILYALNG-KGTLTVVERD-EDNLKKAMDNLSEF 158 (275)
T ss_dssp GHHHHC------------------CCCCTTCEEEEECCT-TSHHHHHHHHHHTT-SSEEEEECSC-HHHHHHHHHHHHTT
T ss_pred HHHhhccccccccChhhHHHHHHHcCCCCcCEEEEecCC-CCHHHHHHHHHcCC-CCEEEEEECC-HHHHHHHHHHHHhc
Confidence 455555555556666666777777777788999999997 99999999987554 6899999999 99999999998632
Q ss_pred --CCcEEEEEcchhhhhhhcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 92 --ANCIEFVKGDAQKLLMGDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 92 --~~~Ve~v~gda~~~L~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
.++++++++|+.+.++ .++||+|++|.+. ...+++.+.+. |+| ||.+++.
T Consensus 159 ~g~~~v~~~~~d~~~~~~--~~~fD~Vi~~~~~----~~~~l~~~~~~--Lkp-gG~l~i~ 210 (275)
T 1yb2_A 159 YDIGNVRTSRSDIADFIS--DQMYDAVIADIPD----PWNHVQKIASM--MKP-GSVATFY 210 (275)
T ss_dssp SCCTTEEEECSCTTTCCC--SCCEEEEEECCSC----GGGSHHHHHHT--EEE-EEEEEEE
T ss_pred CCCCcEEEEECchhccCc--CCCccEEEEcCcC----HHHHHHHHHHH--cCC-CCEEEEE
Confidence 3679999999988543 3679999997655 45778889888 876 7776654
No 60
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.34 E-value=5.2e-12 Score=109.27 Aligned_cols=107 Identities=11% Similarity=0.109 Sum_probs=86.1
Q ss_pred hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc----cc-CCcEEEEEcchhhhhhhcCCC
Q 042616 38 GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG----RY-ANCIEFVKGDAQKLLMGDYRG 112 (220)
Q Consensus 38 ~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~----g~-~~~Ve~v~gda~~~L~~~~~~ 112 (220)
..++++||||||| +|..+..+++.. ...+|++||.| ++.++.|++++. ++ ..+++++++|+.+.++...++
T Consensus 73 ~~~~~~VLdiG~G-~G~~~~~l~~~~--~~~~v~~vEid-~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~ 148 (275)
T 1iy9_A 73 HPNPEHVLVVGGG-DGGVIREILKHP--SVKKATLVDID-GKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQ 148 (275)
T ss_dssp SSSCCEEEEESCT-TCHHHHHHTTCT--TCSEEEEEESC-HHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSC
T ss_pred CCCCCEEEEECCc-hHHHHHHHHhCC--CCceEEEEECC-HHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCC
Confidence 3468999999996 899998887531 25799999999 999999999984 34 368999999999988765578
Q ss_pred ccEEEEcCCCCCc----c-HHHHHHHHHhhcCCCCCCEEEEEec
Q 042616 113 ADFVLIDCNIDID----G-HKNVFRAAKESVMHGSGAGVIVGYN 151 (220)
Q Consensus 113 ~D~VfiD~~k~~~----~-y~~~l~~l~~~~~L~~~Ggviv~dN 151 (220)
||+|++|...... . ..++++.+.+. |+| ||++++..
T Consensus 149 fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~--L~p-gG~lv~~~ 189 (275)
T 1iy9_A 149 YDVIMVDSTEPVGPAVNLFTKGFYAGIAKA--LKE-DGIFVAQT 189 (275)
T ss_dssp EEEEEESCSSCCSCCCCCSTTHHHHHHHHH--EEE-EEEEEEEC
T ss_pred eeEEEECCCCCCCcchhhhHHHHHHHHHHh--cCC-CcEEEEEc
Confidence 9999999865110 1 26789999998 876 99998874
No 61
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.34 E-value=7.8e-12 Score=104.41 Aligned_cols=116 Identities=15% Similarity=0.003 Sum_probs=86.2
Q ss_pred HHHHHHHHhh--CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhh
Q 042616 29 GEFISALAAG--NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLL 106 (220)
Q Consensus 29 ~~~L~~La~~--~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L 106 (220)
.+++..++.. .+..+||||||| +|..+..|+... ..+|++||.+ +.+++.|+++.+....+++++++|+.+.+
T Consensus 47 ~~~~~~l~~~~~~~~~~vLDiGcG-tG~~~~~l~~~~---~~~v~gvD~s-~~~l~~a~~~~~~~~~~v~~~~~d~~~~~ 121 (236)
T 1zx0_A 47 TPYMHALAAAASSKGGRVLEVGFG-MAIAASKVQEAP---IDEHWIIECN-DGVFQRLRDWAPRQTHKVIPLKGLWEDVA 121 (236)
T ss_dssp HHHHHHHHHHHTTTCEEEEEECCT-TSHHHHHHHTSC---EEEEEEEECC-HHHHHHHHHHGGGCSSEEEEEESCHHHHG
T ss_pred HHHHHHHHhhcCCCCCeEEEEecc-CCHHHHHHHhcC---CCeEEEEcCC-HHHHHHHHHHHHhcCCCeEEEecCHHHhh
Confidence 4444444443 456799999997 999999986531 3489999999 99999999998743368999999999975
Q ss_pred hhc-CCCccEEEEcCCC------CCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 107 MGD-YRGADFVLIDCNI------DIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 107 ~~~-~~~~D~VfiD~~k------~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
+.+ .++||+|+.|... .......+++.+.+. |+| ||++++-+.
T Consensus 122 ~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~--Lkp-gG~l~~~~~ 171 (236)
T 1zx0_A 122 PTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRL--LKP-GGVLTYCNL 171 (236)
T ss_dssp GGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHH--EEE-EEEEEECCH
T ss_pred cccCCCceEEEEECCcccchhhhhhhhHHHHHHHHHHh--cCC-CeEEEEEec
Confidence 433 3689999995432 012233568889998 886 898887654
No 62
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.33 E-value=3.7e-12 Score=118.06 Aligned_cols=128 Identities=10% Similarity=0.068 Sum_probs=101.5
Q ss_pred cCCCCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEE
Q 042616 19 MGKRGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIE 96 (220)
Q Consensus 19 ~~~~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve 96 (220)
.+...+....++++..++...+..+|||+||| +|..|+.||..++. .|+|+++|++ +.+++.+++|++ |+ .+|+
T Consensus 84 ~G~~~vQd~ss~l~~~~L~~~~g~~VLDlcaG-pGgkt~~lA~~~~~-~g~V~AvDis-~~rl~~~~~n~~r~g~-~nv~ 159 (456)
T 3m4x_A 84 AGYEYSQEPSAMIVGTAAAAKPGEKVLDLCAA-PGGKSTQLAAQMKG-KGLLVTNEIF-PKRAKILSENIERWGV-SNAI 159 (456)
T ss_dssp TTSCEECCTTTHHHHHHHCCCTTCEEEESSCT-TCHHHHHHHHHHTT-CSEEEEECSS-HHHHHHHHHHHHHHTC-SSEE
T ss_pred CCcEEEECHHHHHHHHHcCCCCCCEEEEECCC-cCHHHHHHHHHcCC-CCEEEEEeCC-HHHHHHHHHHHHHcCC-CceE
Confidence 34455666667888888888889999999996 99999999988765 6899999999 999999999997 66 4799
Q ss_pred EEEcchhhhhhhcCCCccEEEEcCCCCC---------------c--------cHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 97 FVKGDAQKLLMGDYRGADFVLIDCNIDI---------------D--------GHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 97 ~v~gda~~~L~~~~~~~D~VfiD~~k~~---------------~--------~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
++++|+.++.+...+.||.|++|++-.. . ...++++.+.+. |+| ||.||.-...
T Consensus 160 v~~~Da~~l~~~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~--Lkp-GG~LvYsTCs 236 (456)
T 3m4x_A 160 VTNHAPAELVPHFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKM--LKN-KGQLIYSTCT 236 (456)
T ss_dssp EECCCHHHHHHHHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHT--EEE-EEEEEEEESC
T ss_pred EEeCCHHHhhhhccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHh--cCC-CcEEEEEEee
Confidence 9999999876444578999999997200 0 112667888887 876 8888865443
No 63
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.33 E-value=8.6e-12 Score=102.14 Aligned_cols=115 Identities=10% Similarity=-0.001 Sum_probs=91.0
Q ss_pred CCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEc
Q 042616 23 GKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKG 100 (220)
Q Consensus 23 ~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~g 100 (220)
...|...+.+..++...+..+||||||| +|+.++.|+....+ .++|+++|.+ +.+++.|++++. ++ ++++++++
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~-~~~v~~vD~~-~~~~~~a~~~~~~~~~-~~v~~~~~ 135 (215)
T 2yxe_A 60 ISAIHMVGMMCELLDLKPGMKVLEIGTG-CGYHAAVTAEIVGE-DGLVVSIERI-PELAEKAERTLRKLGY-DNVIVIVG 135 (215)
T ss_dssp ECCHHHHHHHHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCT-TSEEEEEESC-HHHHHHHHHHHHHHTC-TTEEEEES
T ss_pred eCcHHHHHHHHHhhCCCCCCEEEEECCC-ccHHHHHHHHHhCC-CCEEEEEeCC-HHHHHHHHHHHHHcCC-CCeEEEEC
Confidence 4567777777777777788999999997 99999999988643 4899999999 999999999987 55 46999999
Q ss_pred chhhhhhhcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 101 DAQKLLMGDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 101 da~~~L~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
|+.+.++. .++||+|+++... .... +.+.+. |+| ||.+++.
T Consensus 136 d~~~~~~~-~~~fD~v~~~~~~--~~~~---~~~~~~--L~p-gG~lv~~ 176 (215)
T 2yxe_A 136 DGTLGYEP-LAPYDRIYTTAAG--PKIP---EPLIRQ--LKD-GGKLLMP 176 (215)
T ss_dssp CGGGCCGG-GCCEEEEEESSBB--SSCC---HHHHHT--EEE-EEEEEEE
T ss_pred CcccCCCC-CCCeeEEEECCch--HHHH---HHHHHH--cCC-CcEEEEE
Confidence 99765542 4689999999876 4433 466666 776 7777664
No 64
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.32 E-value=8.4e-12 Score=103.33 Aligned_cols=103 Identities=11% Similarity=-0.001 Sum_probs=83.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhh--hhcCCCccEE
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLL--MGDYRGADFV 116 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L--~~~~~~~D~V 116 (220)
.+..+|||+||| +|..++.|+..+.+ +++|+++|.+ +.+++.++++++.. .+++++++|+.+.. +...++||+|
T Consensus 72 ~~~~~vLDlG~G-~G~~~~~la~~~~~-~~~v~~vD~s-~~~~~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~D~v 147 (227)
T 1g8a_A 72 KPGKSVLYLGIA-SGTTASHVSDIVGW-EGKIFGIEFS-PRVLRELVPIVEER-RNIVPILGDATKPEEYRALVPKVDVI 147 (227)
T ss_dssp CTTCEEEEETTT-STTHHHHHHHHHCT-TSEEEEEESC-HHHHHHHHHHHSSC-TTEEEEECCTTCGGGGTTTCCCEEEE
T ss_pred CCCCEEEEEecc-CCHHHHHHHHHhCC-CeEEEEEECC-HHHHHHHHHHHhcc-CCCEEEEccCCCcchhhcccCCceEE
Confidence 456899999997 89999999988654 6899999999 99999999998744 68999999998732 2234689999
Q ss_pred EEcCCCCCccHHHH-HHHHHhhcCCCCCCEEEEEe
Q 042616 117 LIDCNIDIDGHKNV-FRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 117 fiD~~k~~~~y~~~-l~~l~~~~~L~~~Ggviv~d 150 (220)
+.|... .+.... ++.+.+. |+| ||.+++-
T Consensus 148 ~~~~~~--~~~~~~~l~~~~~~--Lkp-gG~l~~~ 177 (227)
T 1g8a_A 148 FEDVAQ--PTQAKILIDNAEVY--LKR-GGYGMIA 177 (227)
T ss_dssp EECCCS--TTHHHHHHHHHHHH--EEE-EEEEEEE
T ss_pred EECCCC--HhHHHHHHHHHHHh--cCC-CCEEEEE
Confidence 999876 555444 8999998 886 8877664
No 65
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.32 E-value=7.1e-12 Score=99.67 Aligned_cols=114 Identities=13% Similarity=0.022 Sum_probs=89.3
Q ss_pred hHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCC-cEEEEEcchh
Q 042616 27 DVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYAN-CIEFVKGDAQ 103 (220)
Q Consensus 27 ~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~-~Ve~v~gda~ 103 (220)
...+.+...+...+..+|||+||| +|..++.++.. +.+++++|.+ +.+++.|++++. ++.+ +++++++|+.
T Consensus 39 ~~~~~l~~~~~~~~~~~vLdiG~G-~G~~~~~~~~~----~~~v~~~D~~-~~~~~~a~~~~~~~~~~~~~~~~~~~d~~ 112 (194)
T 1dus_A 39 KGTKILVENVVVDKDDDILDLGCG-YGVIGIALADE----VKSTTMADIN-RRAIKLAKENIKLNNLDNYDIRVVHSDLY 112 (194)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCT-TSHHHHHHGGG----SSEEEEEESC-HHHHHHHHHHHHHTTCTTSCEEEEECSTT
T ss_pred hHHHHHHHHcccCCCCeEEEeCCC-CCHHHHHHHHc----CCeEEEEECC-HHHHHHHHHHHHHcCCCccceEEEECchh
Confidence 345555555566678899999997 99999988875 6799999999 999999999987 5533 4999999998
Q ss_pred hhhhhcCCCccEEEEcCCCCC--ccHHHHHHHHHhhcCCCCCCEEEEEec
Q 042616 104 KLLMGDYRGADFVLIDCNIDI--DGHKNVFRAAKESVMHGSGAGVIVGYN 151 (220)
Q Consensus 104 ~~L~~~~~~~D~VfiD~~k~~--~~y~~~l~~l~~~~~L~~~Ggviv~dN 151 (220)
+.++ .++||+|+.+..-.. .....+++.+.+. |+| ||.+++..
T Consensus 113 ~~~~--~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~--L~~-gG~l~~~~ 157 (194)
T 1dus_A 113 ENVK--DRKYNKIITNPPIRAGKEVLHRIIEEGKEL--LKD-NGEIWVVI 157 (194)
T ss_dssp TTCT--TSCEEEEEECCCSTTCHHHHHHHHHHHHHH--EEE-EEEEEEEE
T ss_pred cccc--cCCceEEEECCCcccchhHHHHHHHHHHHH--cCC-CCEEEEEE
Confidence 8654 468999999986411 3457888999998 876 77766643
No 66
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.32 E-value=2.7e-12 Score=112.44 Aligned_cols=108 Identities=14% Similarity=0.205 Sum_probs=82.4
Q ss_pred hhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--c---c-CCcEEEEEcchhhhhhhcC
Q 042616 37 AGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--R---Y-ANCIEFVKGDAQKLLMGDY 110 (220)
Q Consensus 37 ~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g---~-~~~Ve~v~gda~~~L~~~~ 110 (220)
...++++||||||| +|..+..|++.. ...+|++||+| +++++.|++++. + + ..+++++++|+.+.++...
T Consensus 80 ~~~~~~~VLdiG~G-~G~~~~~l~~~~--~~~~V~~VDid-~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~ 155 (294)
T 3adn_A 80 AHGHAKHVLIIGGG-DGAMLREVTRHK--NVESITMVEID-AGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTS 155 (294)
T ss_dssp HSTTCCEEEEESCT-TCHHHHHHHTCT--TCCEEEEECSC-TTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCC
T ss_pred cCCCCCEEEEEeCC-hhHHHHHHHhCC--CCCEEEEEECC-HHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcC
Confidence 34578999999986 999999988742 26899999999 999999999986 2 2 3589999999999886545
Q ss_pred CCccEEEEcCCCCCc-----cHHHHHHHHHhhcCCCCCCEEEEEec
Q 042616 111 RGADFVLIDCNIDID-----GHKNVFRAAKESVMHGSGAGVIVGYN 151 (220)
Q Consensus 111 ~~~D~VfiD~~k~~~-----~y~~~l~~l~~~~~L~~~Ggviv~dN 151 (220)
++||+|++|...... ...++++.+.+. |+| ||++++..
T Consensus 156 ~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~--Lkp-gG~lv~~~ 198 (294)
T 3adn_A 156 QTFDVIISDCTDPIGPGESLFTSAFYEGCKRC--LNP-GGIFVAQN 198 (294)
T ss_dssp CCEEEEEECC----------CCHHHHHHHHHT--EEE-EEEEEEEE
T ss_pred CCccEEEECCCCccCcchhccHHHHHHHHHHh--cCC-CCEEEEec
Confidence 789999999875110 116789999998 876 99888853
No 67
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=99.32 E-value=5.9e-12 Score=108.49 Aligned_cols=108 Identities=11% Similarity=0.033 Sum_probs=81.7
Q ss_pred hCCCCEEEEEcCCchHHHHHHHHHHc------CCCC----cEEEEEeCCch--------------hHHHHHHHHhcc---
Q 042616 38 GNNAQLIVMACSSIAVSRTLALVAAA------RQTG----GRVVCILSGVI--------------GDIDASKKSLGR--- 90 (220)
Q Consensus 38 ~~~a~~ILEIGtg~~G~sTl~LA~A~------~~~~----grV~tIE~d~~--------------~~~~~Ar~~l~g--- 90 (220)
..++.+|||||+| +||++++++.+. .+.+ .+++++|.+ | +..+.|+++++.
T Consensus 58 ~~~~~~ILEiGfG-tG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~-p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~ 135 (257)
T 2qy6_A 58 PHPLFVVAESGFG-TGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKF-PLTRADLALAHQHWPELAPWAEQLQAQWPM 135 (257)
T ss_dssp SSSEEEEEESCCT-TSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESS-CCCHHHHHHHHTTCGGGHHHHHHHHHTCCC
T ss_pred CCCCCEEEEECCC-hHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECC-cCCHHHHHHHHhcChhHHHHHHHHHHhccc
Confidence 3456899999996 999999988775 3322 589999999 7 334466666531
Q ss_pred ---------cC---CcEEEEEcchhhhhhhcCC----CccEEEEcCCCC--Ccc--HHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 91 ---------YA---NCIEFVKGDAQKLLMGDYR----GADFVLIDCNID--IDG--HKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 91 ---------~~---~~Ve~v~gda~~~L~~~~~----~~D~VfiD~~k~--~~~--y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
+. .+++++.||+.+.|+.+.. .||+||+|+... +.+ +.++|+.+.+. |+| ||++++.
T Consensus 136 ~~~g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~--L~p-GG~l~ty 212 (257)
T 2qy6_A 136 PLPGCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARL--ARP-GGTLATF 212 (257)
T ss_dssp SCSEEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHH--EEE-EEEEEES
T ss_pred cccchhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHH--cCC-CcEEEEE
Confidence 22 4588999999999988643 799999998431 122 68899999999 876 9999974
No 68
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.32 E-value=9e-12 Score=110.22 Aligned_cols=108 Identities=13% Similarity=0.085 Sum_probs=87.0
Q ss_pred hhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcc----c-CCcEEEEEcchhhhhhhcCC
Q 042616 37 AGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGR----Y-ANCIEFVKGDAQKLLMGDYR 111 (220)
Q Consensus 37 ~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g----~-~~~Ve~v~gda~~~L~~~~~ 111 (220)
...++++||||||| +|..+..+++.. ...+|+++|.| +++++.|++++.. + ..+++++++|+.+.++...+
T Consensus 113 ~~~~~~~VLdiG~G-~G~~~~~l~~~~--~~~~v~~vDis-~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~ 188 (321)
T 2pt6_A 113 VSKEPKNVLVVGGG-DGGIIRELCKYK--SVENIDICEID-ETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTN 188 (321)
T ss_dssp HSSSCCEEEEEECT-TCHHHHHHTTCT--TCCEEEEEESC-HHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCS
T ss_pred cCCCCCEEEEEcCC-ccHHHHHHHHcC--CCCEEEEEECC-HHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCC
Confidence 34578999999996 899999888642 26899999999 9999999999862 3 46799999999998865557
Q ss_pred CccEEEEcCCCC----CccH-HHHHHHHHhhcCCCCCCEEEEEec
Q 042616 112 GADFVLIDCNID----IDGH-KNVFRAAKESVMHGSGAGVIVGYN 151 (220)
Q Consensus 112 ~~D~VfiD~~k~----~~~y-~~~l~~l~~~~~L~~~Ggviv~dN 151 (220)
+||+|++|.... ...| .++++.+.+. |+| ||++++..
T Consensus 189 ~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~--Lkp-gG~lv~~~ 230 (321)
T 2pt6_A 189 TYDVIIVDSSDPIGPAETLFNQNFYEKIYNA--LKP-NGYCVAQC 230 (321)
T ss_dssp CEEEEEEECCCSSSGGGGGSSHHHHHHHHHH--EEE-EEEEEEEE
T ss_pred CceEEEECCcCCCCcchhhhHHHHHHHHHHh--cCC-CcEEEEEc
Confidence 899999998431 0223 7889999998 876 99988864
No 69
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.31 E-value=5.7e-11 Score=93.68 Aligned_cols=113 Identities=14% Similarity=0.125 Sum_probs=91.9
Q ss_pred CCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEE
Q 042616 22 RGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVK 99 (220)
Q Consensus 22 ~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~ 99 (220)
....+...+.+.......+..+|||+||| +|..++.|+. . +.+++++|.+ +.+++.|+++++ ++ +++++++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~vLdiG~G-~G~~~~~l~~---~-~~~v~~vD~~-~~~~~~a~~~~~~~~~-~~~~~~~ 89 (183)
T 2yxd_A 17 PITKEEIRAVSIGKLNLNKDDVVVDVGCG-SGGMTVEIAK---R-CKFVYAIDYL-DGAIEVTKQNLAKFNI-KNCQIIK 89 (183)
T ss_dssp CCCCHHHHHHHHHHHCCCTTCEEEEESCC-CSHHHHHHHT---T-SSEEEEEECS-HHHHHHHHHHHHHTTC-CSEEEEE
T ss_pred CcCHHHHHHHHHHHcCCCCCCEEEEeCCC-CCHHHHHHHh---c-CCeEEEEeCC-HHHHHHHHHHHHHcCC-CcEEEEE
Confidence 34556666777777677788999999997 8999999887 2 7899999999 999999999997 55 6799999
Q ss_pred cchhhhhhhcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEec
Q 042616 100 GDAQKLLMGDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYN 151 (220)
Q Consensus 100 gda~~~L~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dN 151 (220)
+|+.+.++. ++||+|+.+.. ....+.++.+.+ + | ||.+++..
T Consensus 90 ~d~~~~~~~--~~~D~i~~~~~---~~~~~~l~~~~~---~-~-gG~l~~~~ 131 (183)
T 2yxd_A 90 GRAEDVLDK--LEFNKAFIGGT---KNIEKIIEILDK---K-K-INHIVANT 131 (183)
T ss_dssp SCHHHHGGG--CCCSEEEECSC---SCHHHHHHHHHH---T-T-CCEEEEEE
T ss_pred CCccccccC--CCCcEEEECCc---ccHHHHHHHHhh---C-C-CCEEEEEe
Confidence 999986654 68999999887 467888888887 4 5 77766654
No 70
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.31 E-value=4.5e-12 Score=108.36 Aligned_cols=115 Identities=16% Similarity=0.088 Sum_probs=90.8
Q ss_pred HHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcc-----cCCcEEEEEcch
Q 042616 28 VGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGR-----YANCIEFVKGDA 102 (220)
Q Consensus 28 ~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g-----~~~~Ve~v~gda 102 (220)
.+.+|..++...+..+|||+||| +|..++.|+...+ +.+|++||.+ +++++.|++++.. +.++++++++|+
T Consensus 24 D~~lL~~~~~~~~~~~VLDlG~G-~G~~~l~la~~~~--~~~v~gvDi~-~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~ 99 (260)
T 2ozv_A 24 DAMLLASLVADDRACRIADLGAG-AGAAGMAVAARLE--KAEVTLYERS-QEMAEFARRSLELPDNAAFSARIEVLEADV 99 (260)
T ss_dssp HHHHHHHTCCCCSCEEEEECCSS-SSHHHHHHHHHCT--TEEEEEEESS-HHHHHHHHHHTTSGGGTTTGGGEEEEECCT
T ss_pred HHHHHHHHhcccCCCEEEEeCCh-HhHHHHHHHHhCC--CCeEEEEECC-HHHHHHHHHHHHhhhhCCCcceEEEEeCCH
Confidence 46677777777778899999997 9999999998754 5899999999 9999999999863 345799999999
Q ss_pred hhhhhh-----c-CCCccEEEEcCCCCC-------------------ccHHHHHHHHHhhcCCCCCCEEEEE
Q 042616 103 QKLLMG-----D-YRGADFVLIDCNIDI-------------------DGHKNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 103 ~~~L~~-----~-~~~~D~VfiD~~k~~-------------------~~y~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
.+.++. + .++||+|+.+.+-.. ..+..+++.+.+. |+| ||.+++
T Consensus 100 ~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~--Lkp-gG~l~~ 168 (260)
T 2ozv_A 100 TLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAI--MVS-GGQLSL 168 (260)
T ss_dssp TCCHHHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHH--EEE-EEEEEE
T ss_pred HHHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHH--cCC-CCEEEE
Confidence 887531 1 368999999854310 2367889999998 887 776655
No 71
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.31 E-value=8.8e-12 Score=109.32 Aligned_cols=117 Identities=10% Similarity=0.111 Sum_probs=93.7
Q ss_pred CCCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEE
Q 042616 21 KRGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFV 98 (220)
Q Consensus 21 ~~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v 98 (220)
+....|...+.+...+...+..+||||||| +|+.++.|+...++ .++|+++|.+ +++++.|+++++ ++ .+++++
T Consensus 56 q~~~~~~~~~~l~~~l~~~~~~~VLDiGcG-~G~~~~~la~~~~~-~~~v~gvD~s-~~~~~~a~~~~~~~g~-~~v~~~ 131 (317)
T 1dl5_A 56 STSSQPSLMALFMEWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGE-KGLVVSVEYS-RKICEIAKRNVERLGI-ENVIFV 131 (317)
T ss_dssp EEECCHHHHHHHHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCT-TCEEEEEESC-HHHHHHHHHHHHHTTC-CSEEEE
T ss_pred eeccCHHHHHHHHHhcCCCCcCEEEEecCC-chHHHHHHHHhcCC-CCEEEEEECC-HHHHHHHHHHHHHcCC-CCeEEE
Confidence 445567777777777777788999999997 89999999987654 6899999999 999999999997 66 459999
Q ss_pred EcchhhhhhhcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 99 KGDAQKLLMGDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 99 ~gda~~~L~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
++|+.+.++. .++||+|+++... .... +.+.+. |+| ||++++.
T Consensus 132 ~~d~~~~~~~-~~~fD~Iv~~~~~--~~~~---~~~~~~--Lkp-gG~lvi~ 174 (317)
T 1dl5_A 132 CGDGYYGVPE-FSPYDVIFVTVGV--DEVP---ETWFTQ--LKE-GGRVIVP 174 (317)
T ss_dssp ESCGGGCCGG-GCCEEEEEECSBB--SCCC---HHHHHH--EEE-EEEEEEE
T ss_pred ECChhhcccc-CCCeEEEEEcCCH--HHHH---HHHHHh--cCC-CcEEEEE
Confidence 9999886643 4689999999877 4433 456666 776 8887775
No 72
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.31 E-value=1.2e-11 Score=107.39 Aligned_cols=116 Identities=14% Similarity=0.126 Sum_probs=90.1
Q ss_pred HHHHHHHh--hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcc----c-CCcEEEEEcch
Q 042616 30 EFISALAA--GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGR----Y-ANCIEFVKGDA 102 (220)
Q Consensus 30 ~~L~~La~--~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g----~-~~~Ve~v~gda 102 (220)
+++..++. ..++++||||||| .|..+..+++.. ...+|++||+| +..++.|++++.. + ..+++++++|+
T Consensus 66 e~l~~~~l~~~~~~~~VLdiG~G-~G~~~~~l~~~~--~~~~v~~vDid-~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~ 141 (283)
T 2i7c_A 66 EMMTHVPMTVSKEPKNVLVVGGG-DGGIIRELCKYK--SVENIDICEID-ETVIEVSKIYFKNISCGYEDKRVNVFIEDA 141 (283)
T ss_dssp HHHHHHHHTTSSSCCEEEEEECT-TSHHHHHHTTCT--TCCEEEEEESC-HHHHHHHHHHCTTTSGGGGSTTEEEEESCH
T ss_pred HHHHHHHHhcCCCCCeEEEEeCC-cCHHHHHHHHcC--CCCEEEEEECC-HHHHHHHHHHhHHhccccCCCcEEEEECCh
Confidence 44444332 3568999999986 899999888642 25899999999 9999999999862 2 46899999999
Q ss_pred hhhhhhcCCCccEEEEcCCCCC----ccH-HHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 103 QKLLMGDYRGADFVLIDCNIDI----DGH-KNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 103 ~~~L~~~~~~~D~VfiD~~k~~----~~y-~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
.+.++...++||+|++|..... ..| .++++.+.+. |+| ||++++...
T Consensus 142 ~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~--L~p-gG~lv~~~~ 193 (283)
T 2i7c_A 142 SKFLENVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNA--LKP-NGYCVAQCE 193 (283)
T ss_dssp HHHHHHCCSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHH--EEE-EEEEEEECC
T ss_pred HHHHHhCCCCceEEEEcCCCCCCcchhhhHHHHHHHHHHh--cCC-CcEEEEECC
Confidence 9988665678999999985311 122 6899999999 876 999888743
No 73
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.31 E-value=2.6e-11 Score=99.54 Aligned_cols=119 Identities=13% Similarity=0.061 Sum_probs=91.2
Q ss_pred CCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCC----cEE
Q 042616 23 GKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYAN----CIE 96 (220)
Q Consensus 23 ~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~----~Ve 96 (220)
.+.+...+++..++...++.+|||+||| +|..+..|+...+ ..+|++||.+ +.+++.|++++. ++.+ +++
T Consensus 12 ~~~~~~~~~l~~~l~~~~~~~vLDiGcG-~G~~~~~l~~~~~--~~~v~gvD~s-~~~~~~a~~~~~~~~~~~~~~~~v~ 87 (217)
T 3jwh_A 12 SLNQQRMNGVVAALKQSNARRVIDLGCG-QGNLLKILLKDSF--FEQITGVDVS-YRSLEIAQERLDRLRLPRNQWERLQ 87 (217)
T ss_dssp CHHHHHHHHHHHHHHHTTCCEEEEETCT-TCHHHHHHHHCTT--CSEEEEEESC-HHHHHHHHHHHTTCCCCHHHHTTEE
T ss_pred CHHHHHHHHHHHHHHhcCCCEEEEeCCC-CCHHHHHHHhhCC--CCEEEEEECC-HHHHHHHHHHHHHhcCCcccCcceE
Confidence 3445667777777788889999999997 9999999987532 3799999999 999999999986 4433 799
Q ss_pred EEEcchhhhhhhcCCCccEEEEcCCCC---CccHHHHHHHHHhhcCCCCCCEEEEE
Q 042616 97 FVKGDAQKLLMGDYRGADFVLIDCNID---IDGHKNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 97 ~v~gda~~~L~~~~~~~D~VfiD~~k~---~~~y~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
++++|+.. ++...++||+|+...-.. ..+...+++.+.+. |+| ||++++
T Consensus 88 ~~~~d~~~-~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~--Lkp-gG~li~ 139 (217)
T 3jwh_A 88 LIQGALTY-QDKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEF--AQP-KIVIVT 139 (217)
T ss_dssp EEECCTTS-CCGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTT--TCC-SEEEEE
T ss_pred EEeCCccc-ccccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHH--cCC-CEEEEE
Confidence 99999854 322246899999776441 12457889999998 887 666654
No 74
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.30 E-value=2.2e-11 Score=100.16 Aligned_cols=104 Identities=12% Similarity=-0.081 Sum_probs=82.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhc-CCCccE
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGD-YRGADF 115 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~-~~~~D~ 115 (220)
.+..+||||||| +|..++.||...+ +.++++||.+ +.+++.|++++. ++ ++++++++|+.++...+ .+.||+
T Consensus 40 ~~~~~vLDiGcG-~G~~~~~la~~~p--~~~v~gvD~s-~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~D~ 114 (214)
T 1yzh_A 40 NDNPIHVEVGSG-KGAFVSGMAKQNP--DINYIGIDIQ-KSVLSYALDKVLEVGV-PNIKLLWVDGSDLTDYFEDGEIDR 114 (214)
T ss_dssp SCCCEEEEESCT-TSHHHHHHHHHCT--TSEEEEEESC-HHHHHHHHHHHHHHCC-SSEEEEECCSSCGGGTSCTTCCSE
T ss_pred CCCCeEEEEccC-cCHHHHHHHHHCC--CCCEEEEEcC-HHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhcCCCCCCE
Confidence 457899999997 9999999998764 5899999999 999999999997 66 68999999998843112 367999
Q ss_pred EEEcCCCCC---------ccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 116 VLIDCNIDI---------DGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 116 VfiD~~k~~---------~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
|+++.+... ..+..+++.+.+. |+| ||++++.
T Consensus 115 i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--Lkp-gG~l~~~ 155 (214)
T 1yzh_A 115 LYLNFSDPWPKKRHEKRRLTYKTFLDTFKRI--LPE-NGEIHFK 155 (214)
T ss_dssp EEEESCCCCCSGGGGGGSTTSHHHHHHHHHH--SCT-TCEEEEE
T ss_pred EEEECCCCccccchhhhccCCHHHHHHHHHH--cCC-CcEEEEE
Confidence 999866410 0346899999998 887 7766553
No 75
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.30 E-value=6.3e-12 Score=116.74 Aligned_cols=126 Identities=13% Similarity=0.053 Sum_probs=99.8
Q ss_pred CCCCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEE
Q 042616 20 GKRGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEF 97 (220)
Q Consensus 20 ~~~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~ 97 (220)
+...+....++++..++...+..+|||+||| +|..|+.||..++. .|+|+++|.+ +.+++.+++|++ |+ . |++
T Consensus 81 G~~~vQd~ss~l~a~~L~~~~g~~VLDlgaG-pG~kt~~LA~~~~~-~g~V~AvDis-~~~l~~a~~n~~r~G~-~-v~~ 155 (464)
T 3m6w_A 81 GLYYIQEPSAQAVGVLLDPKPGERVLDLAAA-PGGKTTHLAARMGG-KGLLLANEVD-GKRVRGLLENVERWGA-P-LAV 155 (464)
T ss_dssp TSEEECCTTTHHHHHHHCCCTTCEEEESSCT-TCHHHHHHHHHTTT-CSEEEEECSC-HHHHHHHHHHHHHHCC-C-CEE
T ss_pred CeEEEECHHHHHHHHhcCcCCCCEEEEEcCC-cCHHHHHHHHhCCC-CCEEEEEECC-HHHHHHHHHHHHHcCC-e-EEE
Confidence 3344555567777777788888999999996 99999999988765 6899999999 999999999997 76 3 999
Q ss_pred EEcchhhhhhhcCCCccEEEEcCCCCC-------c----------------cHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 98 VKGDAQKLLMGDYRGADFVLIDCNIDI-------D----------------GHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 98 v~gda~~~L~~~~~~~D~VfiD~~k~~-------~----------------~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
+++|+.++.+...+.||.|++|++-.. . .+.++++.+.+. |+| ||.+|.-...
T Consensus 156 ~~~Da~~l~~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~--Lkp-GG~LvysTCs 231 (464)
T 3m6w_A 156 TQAPPRALAEAFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRL--LGP-GGVLVYSTCT 231 (464)
T ss_dssp ECSCHHHHHHHHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTT--EEE-EEEEEEEESC
T ss_pred EECCHHHhhhhccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHh--cCC-CcEEEEEecc
Confidence 999999876434578999999987410 0 126678888887 876 8888865443
No 76
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.30 E-value=1.2e-11 Score=103.34 Aligned_cols=103 Identities=12% Similarity=-0.035 Sum_probs=81.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhh-c-CCCcc
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMG-D-YRGAD 114 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~-~-~~~~D 114 (220)
.+...||||||| +|.+++.||...+ +.+|++||.+ +.+++.|+++++ ++ .+|+++++|+.++++. + .++||
T Consensus 33 ~~~~~vLDiGcG-~G~~~~~lA~~~p--~~~v~giD~s-~~~l~~a~~~~~~~~l-~nv~~~~~Da~~~l~~~~~~~~~d 107 (218)
T 3dxy_A 33 REAPVTLEIGFG-MGASLVAMAKDRP--EQDFLGIEVH-SPGVGACLASAHEEGL-SNLRVMCHDAVEVLHKMIPDNSLR 107 (218)
T ss_dssp SCCCEEEEESCT-TCHHHHHHHHHCT--TSEEEEECSC-HHHHHHHHHHHHHTTC-SSEEEECSCHHHHHHHHSCTTCEE
T ss_pred CCCCeEEEEeee-ChHHHHHHHHHCC--CCeEEEEEec-HHHHHHHHHHHHHhCC-CcEEEEECCHHHHHHHHcCCCChh
Confidence 367899999997 9999999998764 5899999999 999999999986 55 5799999999998764 2 47899
Q ss_pred EEEEc---CCCCCcc------HHHHHHHHHhhcCCCCCCEEEEE
Q 042616 115 FVLID---CNIDIDG------HKNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 115 ~VfiD---~~k~~~~------y~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
.|++. .+..... ...+++.+.+. |+| ||++++
T Consensus 108 ~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~--Lkp-GG~l~i 148 (218)
T 3dxy_A 108 MVQLFFPDPWHKARHNKRRIVQVPFAELVKSK--LQL-GGVFHM 148 (218)
T ss_dssp EEEEESCCCCCSGGGGGGSSCSHHHHHHHHHH--EEE-EEEEEE
T ss_pred eEEEeCCCCccchhhhhhhhhhHHHHHHHHHH--cCC-CcEEEE
Confidence 99985 3221111 13589999998 887 777654
No 77
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.30 E-value=7.3e-12 Score=108.14 Aligned_cols=101 Identities=12% Similarity=0.086 Sum_probs=83.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhcCCCccEE
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGDYRGADFV 116 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~~~~~D~V 116 (220)
.+.++|||+||| +|+.++.+|.... .+|+++|.+ +.+++.|++|++ ++.++++++++|+.+.++ .+.||+|
T Consensus 124 ~~~~~VLDlgcG-~G~~~~~la~~~~---~~V~~vD~s-~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~--~~~fD~V 196 (278)
T 2frn_A 124 KPDELVVDMFAG-IGHLSLPIAVYGK---AKVIAIEKD-PYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG--ENIADRI 196 (278)
T ss_dssp CTTCEEEETTCT-TTTTHHHHHHHTC---CEEEEECCC-HHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC--CSCEEEE
T ss_pred CCCCEEEEeccc-CCHHHHHHHHhCC---CEEEEEECC-HHHHHHHHHHHHHcCCCceEEEEECCHHHhcc--cCCccEE
Confidence 347899999997 9999999998642 289999999 999999999997 776779999999999775 5789999
Q ss_pred EEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 117 LIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 117 fiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
++|.+. ...++++.+.+. |+| ||++++...
T Consensus 197 i~~~p~---~~~~~l~~~~~~--Lkp-gG~l~~~~~ 226 (278)
T 2frn_A 197 LMGYVV---RTHEFIPKALSI--AKD-GAIIHYHNT 226 (278)
T ss_dssp EECCCS---SGGGGHHHHHHH--EEE-EEEEEEEEE
T ss_pred EECCch---hHHHHHHHHHHH--CCC-CeEEEEEEe
Confidence 999876 335677888888 876 888777543
No 78
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.30 E-value=2.9e-11 Score=99.25 Aligned_cols=118 Identities=13% Similarity=0.041 Sum_probs=89.7
Q ss_pred CChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCC----cEEE
Q 042616 24 KEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYAN----CIEF 97 (220)
Q Consensus 24 ~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~----~Ve~ 97 (220)
+.+...+++..++...++.+||||||| +|..+..|+...+ ..+|++||++ +.+++.|++++. ++.+ ++++
T Consensus 13 ~~~~~~~~l~~~l~~~~~~~vLDiGcG-~G~~~~~l~~~~~--~~~v~gvD~s-~~~~~~a~~~~~~~~~~~~~~~~v~~ 88 (219)
T 3jwg_A 13 LNQQRLGTVVAVLKSVNAKKVIDLGCG-EGNLLSLLLKDKS--FEQITGVDVS-YSVLERAKDRLKIDRLPEMQRKRISL 88 (219)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEETCT-TCHHHHHHHTSTT--CCEEEEEESC-HHHHHHHHHHHTGGGSCHHHHTTEEE
T ss_pred chHHHHHHHHHHHhhcCCCEEEEecCC-CCHHHHHHHhcCC--CCEEEEEECC-HHHHHHHHHHHHhhccccccCcceEE
Confidence 345566777777777889999999997 9999999987542 3799999999 999999999986 4433 8999
Q ss_pred EEcchhhhhhhcCCCccEEEEcCCCCC---ccHHHHHHHHHhhcCCCCCCEEEEE
Q 042616 98 VKGDAQKLLMGDYRGADFVLIDCNIDI---DGHKNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 98 v~gda~~~L~~~~~~~D~VfiD~~k~~---~~y~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
+++|+.. ++...++||+|+...-... .+...+++.+.+. |+| ||+++.
T Consensus 89 ~~~d~~~-~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~--Lkp-gG~~i~ 139 (219)
T 3jwg_A 89 FQSSLVY-RDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEF--TRP-QTVIVS 139 (219)
T ss_dssp EECCSSS-CCGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTT--TCC-SEEEEE
T ss_pred EeCcccc-cccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHh--hCC-CEEEEE
Confidence 9999854 3322468999997654311 1335788999998 887 777665
No 79
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.30 E-value=2.3e-11 Score=98.70 Aligned_cols=118 Identities=15% Similarity=0.084 Sum_probs=88.7
Q ss_pred hhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchh
Q 042616 26 PDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQ 103 (220)
Q Consensus 26 p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~ 103 (220)
+...+.+....... +.+|||+||| +|..+..|+.. . +.+++++|++ +.+++.|++++. ++.++++++++|+.
T Consensus 30 ~~~~~~~~~~~~~~-~~~vLdiG~G-~G~~~~~l~~~--~-~~~v~~~D~s-~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 103 (219)
T 3dlc_A 30 PIIAENIINRFGIT-AGTCIDIGSG-PGALSIALAKQ--S-DFSIRALDFS-KHMNEIALKNIADANLNDRIQIVQGDVH 103 (219)
T ss_dssp HHHHHHHHHHHCCC-EEEEEEETCT-TSHHHHHHHHH--S-EEEEEEEESC-HHHHHHHHHHHHHTTCTTTEEEEECBTT
T ss_pred HHHHHHHHHhcCCC-CCEEEEECCC-CCHHHHHHHHc--C-CCeEEEEECC-HHHHHHHHHHHHhccccCceEEEEcCHH
Confidence 33344443333333 3499999997 99999999986 2 6799999999 999999999987 66678999999998
Q ss_pred hhhhhcCCCccEEEEcCCC-CCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 104 KLLMGDYRGADFVLIDCNI-DIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 104 ~~L~~~~~~~D~VfiD~~k-~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
+. +...++||+|+..... ...+....++.+.+. |+| ||.+++.+.+
T Consensus 104 ~~-~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~--L~p-gG~l~~~~~~ 150 (219)
T 3dlc_A 104 NI-PIEDNYADLIVSRGSVFFWEDVATAFREIYRI--LKS-GGKTYIGGGF 150 (219)
T ss_dssp BC-SSCTTCEEEEEEESCGGGCSCHHHHHHHHHHH--EEE-EEEEEEEECC
T ss_pred HC-CCCcccccEEEECchHhhccCHHHHHHHHHHh--CCC-CCEEEEEecc
Confidence 73 3224789999987643 114568899999998 886 7777665433
No 80
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.29 E-value=2e-11 Score=103.49 Aligned_cols=111 Identities=7% Similarity=-0.041 Sum_probs=86.4
Q ss_pred HHHHHHhhCC-CCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhh
Q 042616 31 FISALAAGNN-AQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLM 107 (220)
Q Consensus 31 ~L~~La~~~~-a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~ 107 (220)
-|.+++...+ ..+|+||||| +|+.++.||...+ .++|+++|.+ +..++.|++|++ ++.++|+++.+|+.+.++
T Consensus 5 RL~~l~~~v~~g~~VlDIGtG-sG~l~i~la~~~~--~~~V~avDi~-~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~ 80 (225)
T 3kr9_A 5 RLELVASFVSQGAILLDVGSD-HAYLPIELVERGQ--IKSAIAGEVV-EGPYQSAVKNVEAHGLKEKIQVRLANGLAAFE 80 (225)
T ss_dssp HHHHHHTTSCTTEEEEEETCS-TTHHHHHHHHTTS--EEEEEEEESS-HHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC
T ss_pred HHHHHHHhCCCCCEEEEeCCC-cHHHHHHHHHhCC--CCEEEEEECC-HHHHHHHHHHHHHcCCCceEEEEECchhhhcc
Confidence 3566666554 4689999997 9999999998533 5799999999 999999999997 787889999999988775
Q ss_pred hcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 108 GDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 108 ~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
. .++||.|++-+-- .....+.++..... |++ ++.+|.-
T Consensus 81 ~-~~~~D~IviaG~G-g~~i~~Il~~~~~~--L~~-~~~lVlq 118 (225)
T 3kr9_A 81 E-TDQVSVITIAGMG-GRLIARILEEGLGK--LAN-VERLILQ 118 (225)
T ss_dssp G-GGCCCEEEEEEEC-HHHHHHHHHHTGGG--CTT-CCEEEEE
T ss_pred c-CcCCCEEEEcCCC-hHHHHHHHHHHHHH--hCC-CCEEEEE
Confidence 3 2369999985543 12357888888888 876 5555543
No 81
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.29 E-value=1.4e-11 Score=100.08 Aligned_cols=98 Identities=9% Similarity=0.004 Sum_probs=81.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhcCCCccEEE
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGDYRGADFVL 117 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~~~~~D~Vf 117 (220)
+..+|||+||| +|..++.|+...+ +.+++++|.+ +.+++.|++++. ++. +++++++|+.+..+ .++||+|+
T Consensus 65 ~~~~vLDiG~G-~G~~~~~l~~~~~--~~~v~~vD~s-~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~--~~~~D~i~ 137 (207)
T 1jsx_A 65 QGERFIDVGTG-PGLPGIPLSIVRP--EAHFTLLDSL-GKRVRFLRQVQHELKLE-NIEPVQSRVEEFPS--EPPFDGVI 137 (207)
T ss_dssp CSSEEEEETCT-TTTTHHHHHHHCT--TSEEEEEESC-HHHHHHHHHHHHHTTCS-SEEEEECCTTTSCC--CSCEEEEE
T ss_pred CCCeEEEECCC-CCHHHHHHHHHCC--CCEEEEEeCC-HHHHHHHHHHHHHcCCC-CeEEEecchhhCCc--cCCcCEEE
Confidence 47899999997 9999999998764 6899999999 999999999987 553 49999999988653 36899999
Q ss_pred EcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 118 IDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 118 iD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
..+- ..+..+++.+.+. |+| ||.+++.
T Consensus 138 ~~~~---~~~~~~l~~~~~~--L~~-gG~l~~~ 164 (207)
T 1jsx_A 138 SRAF---ASLNDMVSWCHHL--PGE-QGRFYAL 164 (207)
T ss_dssp CSCS---SSHHHHHHHHTTS--EEE-EEEEEEE
T ss_pred Eecc---CCHHHHHHHHHHh--cCC-CcEEEEE
Confidence 7653 5788999999998 876 7777665
No 82
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.29 E-value=2.9e-11 Score=109.30 Aligned_cols=106 Identities=11% Similarity=0.032 Sum_probs=83.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCC-cEEEEEcchhhhhhhc---CCC
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYAN-CIEFVKGDAQKLLMGD---YRG 112 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~-~Ve~v~gda~~~L~~~---~~~ 112 (220)
.+.++|||+||| +|..++.+|... ..+|++||.+ +.+++.|++|++ ++.+ +++++++|+.+.++.+ ...
T Consensus 211 ~~~~~VLDl~cG-tG~~sl~la~~g---a~~V~~vD~s-~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~ 285 (385)
T 2b78_A 211 AAGKTVLNLFSY-TAAFSVAAAMGG---AMATTSVDLA-KRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLT 285 (385)
T ss_dssp TBTCEEEEETCT-TTHHHHHHHHTT---BSEEEEEESC-TTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCC
T ss_pred cCCCeEEEEeec-cCHHHHHHHHCC---CCEEEEEECC-HHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCC
Confidence 567899999997 999999998741 3599999999 999999999997 6655 8999999999988654 358
Q ss_pred ccEEEEcCCCCC----------ccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 113 ADFVLIDCNIDI----------DGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 113 ~D~VfiD~~k~~----------~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
||+|++|++.-. ..|.++++.+.+. |+| ||++++...
T Consensus 286 fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~--L~p-gG~l~~~~~ 332 (385)
T 2b78_A 286 YDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEI--LSE-NGLIIASTN 332 (385)
T ss_dssp EEEEEECCCCC-----CCCCHHHHHHHHHHHHHHT--EEE-EEEEEEEEC
T ss_pred ccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHh--cCC-CcEEEEEeC
Confidence 999999987610 1345566777777 876 777766543
No 83
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.28 E-value=5.1e-12 Score=109.68 Aligned_cols=108 Identities=19% Similarity=0.110 Sum_probs=85.4
Q ss_pred hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhcCCCccE
Q 042616 38 GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGDYRGADF 115 (220)
Q Consensus 38 ~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~~~~~D~ 115 (220)
..++.+||||||| +|..++.||.+..+ +.+|++||.+ +.+++.|++++. ++.++++++++|+.+.. . .++||+
T Consensus 116 l~~~~~vLDiGcG-~G~~~~~la~~~~~-~~~v~gvD~s-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~-~~~fD~ 190 (305)
T 3ocj_A 116 LRPGCVVASVPCG-WMSELLALDYSACP-GVQLVGIDYD-PEALDGATRLAAGHALAGQITLHRQDAWKLD-T-REGYDL 190 (305)
T ss_dssp CCTTCEEEETTCT-TCHHHHTSCCTTCT-TCEEEEEESC-HHHHHHHHHHHTTSTTGGGEEEEECCGGGCC-C-CSCEEE
T ss_pred CCCCCEEEEecCC-CCHHHHHHHHhcCC-CCeEEEEECC-HHHHHHHHHHHHhcCCCCceEEEECchhcCC-c-cCCeEE
Confidence 4667899999997 99999988744443 7899999999 999999999997 66677999999999853 2 378999
Q ss_pred EEEcCCC----CCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 116 VLIDCNI----DIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 116 VfiD~~k----~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
|+..... +...+..+++.+.+. |+| ||.+++.+..
T Consensus 191 v~~~~~~~~~~~~~~~~~~l~~~~~~--Lkp-gG~l~i~~~~ 229 (305)
T 3ocj_A 191 LTSNGLNIYEPDDARVTELYRRFWQA--LKP-GGALVTSFLT 229 (305)
T ss_dssp EECCSSGGGCCCHHHHHHHHHHHHHH--EEE-EEEEEEECCC
T ss_pred EEECChhhhcCCHHHHHHHHHHHHHh--cCC-CeEEEEEecC
Confidence 9986532 012334579999998 886 8888887654
No 84
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.28 E-value=2e-11 Score=113.64 Aligned_cols=127 Identities=11% Similarity=0.066 Sum_probs=98.1
Q ss_pred CCCCCChhHHHHHHHHHhhC--CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcE
Q 042616 20 GKRGKEPDVGEFISALAAGN--NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCI 95 (220)
Q Consensus 20 ~~~~~~p~~~~~L~~La~~~--~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~V 95 (220)
+...+....+.++..++... +..+|||+||| +|..|+.||..++. .|+|+++|.+ +.+++.+++|++ ++ .+|
T Consensus 95 G~~~~Qd~~s~l~~~~L~~~~~~g~~VLDl~aG-pG~kt~~lA~~~~~-~g~V~avDis-~~~l~~~~~n~~r~g~-~nv 170 (479)
T 2frx_A 95 GLFYIQEASSMLPVAALFADGNAPQRVMDVAAA-PGSKTTQISARMNN-EGAILANEFS-ASRVKVLHANISRCGI-SNV 170 (479)
T ss_dssp TSEEECCHHHHHHHHHHTTTTCCCSEEEESSCT-TSHHHHHHHHHTTT-CSEEEEECSS-HHHHHHHHHHHHHHTC-CSE
T ss_pred cEEEEECHHHHHHHHHhCcccCCCCEEEEeCCC-CCHHHHHHHHhCCC-CCEEEEEECC-HHHHHHHHHHHHHcCC-CcE
Confidence 33445555566666666666 78899999996 99999999998764 6999999999 999999999997 66 479
Q ss_pred EEEEcchhhhhhhcCCCccEEEEcCCCCC-------c----------------cHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 96 EFVKGDAQKLLMGDYRGADFVLIDCNIDI-------D----------------GHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 96 e~v~gda~~~L~~~~~~~D~VfiD~~k~~-------~----------------~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
+++++|+.++.+...+.||.|++|++-.. . ...++++.+.+. |+| ||.+|....
T Consensus 171 ~~~~~D~~~~~~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~--Lkp-GG~LvysTc 247 (479)
T 2frx_A 171 ALTHFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHA--LRP-GGTLVYSTC 247 (479)
T ss_dssp EEECCCSTTHHHHSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHH--EEE-EEEEEEEES
T ss_pred EEEeCCHHHhhhhccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHh--cCC-CCEEEEecc
Confidence 99999998865434568999999976410 0 024567888888 876 898887655
Q ss_pred C
Q 042616 153 L 153 (220)
Q Consensus 153 ~ 153 (220)
.
T Consensus 248 s 248 (479)
T 2frx_A 248 T 248 (479)
T ss_dssp C
T ss_pred c
Confidence 4
No 85
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.28 E-value=2.1e-11 Score=118.27 Aligned_cols=113 Identities=13% Similarity=0.077 Sum_probs=91.6
Q ss_pred HHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccC-CcEEEEEcchhhhhhhc
Q 042616 33 SALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYA-NCIEFVKGDAQKLLMGD 109 (220)
Q Consensus 33 ~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~-~~Ve~v~gda~~~L~~~ 109 (220)
..++...+.++|||+||| +|..++.+|.. ...+|++||.+ +.+++.|++|++ ++. ++++++++|+.+.++..
T Consensus 532 ~~l~~~~~g~~VLDlg~G-tG~~sl~aa~~---ga~~V~aVD~s-~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~ 606 (703)
T 3v97_A 532 RMLGQMSKGKDFLNLFSY-TGSATVHAGLG---GARSTTTVDMS-RTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREA 606 (703)
T ss_dssp HHHHHHCTTCEEEEESCT-TCHHHHHHHHT---TCSEEEEEESC-HHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHC
T ss_pred HHHHHhcCCCcEEEeeec-hhHHHHHHHHC---CCCEEEEEeCC-HHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhc
Confidence 334455678999999996 99999988863 14589999999 999999999997 675 58999999999998775
Q ss_pred CCCccEEEEcCCCC------------CccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 110 YRGADFVLIDCNID------------IDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 110 ~~~~D~VfiD~~k~------------~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
.++||+|++|++.- ...|.++++.+.+. |+| ||++++.+..
T Consensus 607 ~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~--Lkp-gG~L~~s~~~ 659 (703)
T 3v97_A 607 NEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRL--LRA-GGTIMFSNNK 659 (703)
T ss_dssp CCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHH--EEE-EEEEEEEECC
T ss_pred CCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHh--cCC-CcEEEEEECC
Confidence 67899999999730 13577888888898 876 8888876554
No 86
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.28 E-value=3.2e-11 Score=102.68 Aligned_cols=104 Identities=13% Similarity=0.019 Sum_probs=84.4
Q ss_pred hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhh--hhhcCCCccE
Q 042616 38 GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKL--LMGDYRGADF 115 (220)
Q Consensus 38 ~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~--L~~~~~~~D~ 115 (220)
..+..+|||+||| +|++|..||....+ .|+|+++|.+ +++++.++++.+.. .+++.+.+|+.+. .+...+.+|+
T Consensus 75 ikpG~~VldlG~G-~G~~~~~la~~VG~-~G~V~avD~s-~~~~~~l~~~a~~~-~ni~~V~~d~~~p~~~~~~~~~vDv 150 (233)
T 4df3_A 75 VKEGDRILYLGIA-SGTTASHMSDIIGP-RGRIYGVEFA-PRVMRDLLTVVRDR-RNIFPILGDARFPEKYRHLVEGVDG 150 (233)
T ss_dssp CCTTCEEEEETCT-TSHHHHHHHHHHCT-TCEEEEEECC-HHHHHHHHHHSTTC-TTEEEEESCTTCGGGGTTTCCCEEE
T ss_pred CCCCCEEEEecCc-CCHHHHHHHHHhCC-CceEEEEeCC-HHHHHHHHHhhHhh-cCeeEEEEeccCccccccccceEEE
Confidence 4667999999997 99999999999877 8999999999 99999999988744 5799999998653 2333578999
Q ss_pred EEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEE
Q 042616 116 VLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 116 VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
||.|-.. ..+....+..+.+. |+| ||.++.
T Consensus 151 Vf~d~~~-~~~~~~~l~~~~r~--LKp-GG~lvI 180 (233)
T 4df3_A 151 LYADVAQ-PEQAAIVVRNARFF--LRD-GGYMLM 180 (233)
T ss_dssp EEECCCC-TTHHHHHHHHHHHH--EEE-EEEEEE
T ss_pred EEEeccC-ChhHHHHHHHHHHh--ccC-CCEEEE
Confidence 9999877 24456778888888 887 665543
No 87
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.28 E-value=1.5e-11 Score=102.81 Aligned_cols=113 Identities=12% Similarity=0.059 Sum_probs=87.6
Q ss_pred CCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEc
Q 042616 23 GKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKG 100 (220)
Q Consensus 23 ~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~g 100 (220)
...|...+.+..++...+..+||||||| +|+.++.|+...+ ++|+++|.+ +..++.|+++++ ++ .+++++.+
T Consensus 74 ~~~~~~~~~~~~~l~~~~~~~vLdiG~G-~G~~~~~la~~~~---~~v~~vD~~-~~~~~~a~~~~~~~~~-~~v~~~~~ 147 (235)
T 1jg1_A 74 VSAPHMVAIMLEIANLKPGMNILEVGTG-SGWNAALISEIVK---TDVYTIERI-PELVEFAKRNLERAGV-KNVHVILG 147 (235)
T ss_dssp ECCHHHHHHHHHHHTCCTTCCEEEECCT-TSHHHHHHHHHHC---SCEEEEESC-HHHHHHHHHHHHHTTC-CSEEEEES
T ss_pred eccHHHHHHHHHhcCCCCCCEEEEEeCC-cCHHHHHHHHHhC---CEEEEEeCC-HHHHHHHHHHHHHcCC-CCcEEEEC
Confidence 3456677777677777788899999997 9999999998753 799999999 999999999997 55 45999999
Q ss_pred chhhhhhhcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 101 DAQKLLMGDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 101 da~~~L~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
|+...++. ..+||+|+++... .... +.+.+. |+| ||.+++.
T Consensus 148 d~~~~~~~-~~~fD~Ii~~~~~--~~~~---~~~~~~--L~p-gG~lvi~ 188 (235)
T 1jg1_A 148 DGSKGFPP-KAPYDVIIVTAGA--PKIP---EPLIEQ--LKI-GGKLIIP 188 (235)
T ss_dssp CGGGCCGG-GCCEEEEEECSBB--SSCC---HHHHHT--EEE-EEEEEEE
T ss_pred CcccCCCC-CCCccEEEECCcH--HHHH---HHHHHh--cCC-CcEEEEE
Confidence 98544433 3469999999876 4443 355666 766 8877664
No 88
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.27 E-value=6.6e-11 Score=102.08 Aligned_cols=131 Identities=11% Similarity=0.034 Sum_probs=98.6
Q ss_pred hhhHHHHHHHHhcCCCCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHH
Q 042616 7 ENATKAYLQALKMGKRGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKK 86 (220)
Q Consensus 7 e~a~~aY~~~l~~~~~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~ 86 (220)
....+.|.+. .....+...++|..+.. .+..+||||||| +|..+..|+...++ +.+|++||++ +.+++.|++
T Consensus 8 ~~~~~~y~~~----rp~y~~~~~~~l~~~~~-~~~~~vLDiGcG-~G~~~~~la~~~~~-~~~v~gvD~s-~~~~~~a~~ 79 (299)
T 3g5t_A 8 DFNSERYSSS----RPSYPSDFYKMIDEYHD-GERKLLVDVGCG-PGTATLQMAQELKP-FEQIIGSDLS-ATMIKTAEV 79 (299)
T ss_dssp TCCHHHHHHH----SCCCCHHHHHHHHHHCC-SCCSEEEEETCT-TTHHHHHHHHHSSC-CSEEEEEESC-HHHHHHHHH
T ss_pred ccChHHHhhc----CCCCCHHHHHHHHHHhc-CCCCEEEEECCC-CCHHHHHHHHhCCC-CCEEEEEeCC-HHHHHHHHH
Confidence 3344455443 34455666666665533 478999999997 99999999986544 7899999999 999999999
Q ss_pred Hhcc---cCCcEEEEEcchhhhhhhcC------CCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEE
Q 042616 87 SLGR---YANCIEFVKGDAQKLLMGDY------RGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 87 ~l~g---~~~~Ve~v~gda~~~L~~~~------~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
+++. ...+++++++|+.+.- ... ++||+|+.......-+....++.+.+. |+| ||.+++
T Consensus 80 ~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~--Lkp-gG~l~i 147 (299)
T 3g5t_A 80 IKEGSPDTYKNVSFKISSSDDFK-FLGADSVDKQKIDMITAVECAHWFDFEKFQRSAYAN--LRK-DGTIAI 147 (299)
T ss_dssp HHHHCC-CCTTEEEEECCTTCCG-GGCTTTTTSSCEEEEEEESCGGGSCHHHHHHHHHHH--EEE-EEEEEE
T ss_pred HHHhccCCCCceEEEEcCHHhCC-ccccccccCCCeeEEeHhhHHHHhCHHHHHHHHHHh--cCC-CcEEEE
Confidence 9873 3578999999998743 223 689999987654223678899999999 886 888776
No 89
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.27 E-value=2.7e-12 Score=107.12 Aligned_cols=110 Identities=17% Similarity=0.142 Sum_probs=82.9
Q ss_pred HHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhh
Q 042616 30 EFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLM 107 (220)
Q Consensus 30 ~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~ 107 (220)
.++..+....+..+|||+||| +|..++.|+.. +++|+++|.+ +.+++.|+++++ ++.++++++++|+.+..+
T Consensus 68 ~l~~~~~~~~~~~~vLD~gcG-~G~~~~~la~~----~~~v~~vD~s-~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 141 (241)
T 3gdh_A 68 HIAGRVSQSFKCDVVVDAFCG-VGGNTIQFALT----GMRVIAIDID-PVKIALARNNAEVYGIADKIEFICGDFLLLAS 141 (241)
T ss_dssp HHHHHHHHHSCCSEEEETTCT-TSHHHHHHHHT----TCEEEEEESC-HHHHHHHHHHHHHTTCGGGEEEEESCHHHHGG
T ss_pred HHHHHhhhccCCCEEEECccc-cCHHHHHHHHc----CCEEEEEECC-HHHHHHHHHHHHHcCCCcCeEEEECChHHhcc
Confidence 334444445578999999997 99999999974 6899999999 999999999997 555689999999999764
Q ss_pred hcCCCccEEEEcCCCCCccH-HHHHHHHHhhcCCCCCCEEEEEe
Q 042616 108 GDYRGADFVLIDCNIDIDGH-KNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 108 ~~~~~~D~VfiD~~k~~~~y-~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
..+||+|+.|.......+ ...+..+.+. |+| ||+++++
T Consensus 142 --~~~~D~v~~~~~~~~~~~~~~~~~~~~~~--L~p-gG~~i~~ 180 (241)
T 3gdh_A 142 --FLKADVVFLSPPWGGPDYATAETFDIRTM--MSP-DGFEIFR 180 (241)
T ss_dssp --GCCCSEEEECCCCSSGGGGGSSSBCTTTS--CSS-CHHHHHH
T ss_pred --cCCCCEEEECCCcCCcchhhhHHHHHHhh--cCC-cceeHHH
Confidence 378999999987621111 1133345555 665 7776655
No 90
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.27 E-value=2e-11 Score=101.73 Aligned_cols=101 Identities=17% Similarity=0.026 Sum_probs=81.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhh---hhhcCCCccE
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKL---LMGDYRGADF 115 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~---L~~~~~~~D~ 115 (220)
.+..+|||+||| +|..++.|+...+ .++|++||.+ +.+++.|+++++.. .+++++.+|+.+. ++. .+.||+
T Consensus 73 ~~~~~VLDlGcG-~G~~~~~la~~~~--~~~v~gvD~s-~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~~~~~-~~~~D~ 146 (230)
T 1fbn_A 73 KRDSKILYLGAS-AGTTPSHVADIAD--KGIVYAIEYA-PRIMRELLDACAER-ENIIPILGDANKPQEYANI-VEKVDV 146 (230)
T ss_dssp CTTCEEEEESCC-SSHHHHHHHHHTT--TSEEEEEESC-HHHHHHHHHHTTTC-TTEEEEECCTTCGGGGTTT-SCCEEE
T ss_pred CCCCEEEEEccc-CCHHHHHHHHHcC--CcEEEEEECC-HHHHHHHHHHhhcC-CCeEEEECCCCCccccccc-CccEEE
Confidence 456899999997 8999999998765 4899999999 99999999998744 6899999999762 222 268999
Q ss_pred EEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEE
Q 042616 116 VLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 116 VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
||.|... ...+..+++.+.+. |+| ||.+++
T Consensus 147 v~~~~~~-~~~~~~~l~~~~~~--Lkp-gG~l~i 176 (230)
T 1fbn_A 147 IYEDVAQ-PNQAEILIKNAKWF--LKK-GGYGMI 176 (230)
T ss_dssp EEECCCS-TTHHHHHHHHHHHH--EEE-EEEEEE
T ss_pred EEEecCC-hhHHHHHHHHHHHh--CCC-CcEEEE
Confidence 9988644 14557779999988 887 777766
No 91
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.27 E-value=2.6e-11 Score=100.11 Aligned_cols=115 Identities=13% Similarity=0.031 Sum_probs=86.1
Q ss_pred CChhHH-HHHHHHH-hhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--cc----CCcE
Q 042616 24 KEPDVG-EFISALA-AGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RY----ANCI 95 (220)
Q Consensus 24 ~~p~~~-~~L~~La-~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~----~~~V 95 (220)
..|... .++..+. ...+..+|||+||| +|+.+..|+....+ .++|+++|.+ +.+++.|++++. +. .+++
T Consensus 59 ~~p~~~~~~l~~l~~~~~~~~~vLDiG~G-~G~~~~~la~~~~~-~~~v~~vD~s-~~~~~~a~~~~~~~~~~~~~~~~v 135 (226)
T 1i1n_A 59 SAPHMHAYALELLFDQLHEGAKALDVGSG-SGILTACFARMVGC-TGKVIGIDHI-KELVDDSVNNVRKDDPTLLSSGRV 135 (226)
T ss_dssp CCHHHHHHHHHHTTTTSCTTCEEEEETCT-TSHHHHHHHHHHCT-TCEEEEEESC-HHHHHHHHHHHHHHCTHHHHTSSE
T ss_pred cCHHHHHHHHHHHHhhCCCCCEEEEEcCC-cCHHHHHHHHHhCC-CcEEEEEeCC-HHHHHHHHHHHHhhcccccCCCcE
Confidence 445544 3444443 25567899999997 99999999987643 5799999999 999999999986 32 3689
Q ss_pred EEEEcchhhhhhhcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 96 EFVKGDAQKLLMGDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 96 e~v~gda~~~L~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
+++++|+.+..+. .++||+|+++... ... ++.+.+. |+| ||++++-
T Consensus 136 ~~~~~d~~~~~~~-~~~fD~i~~~~~~--~~~---~~~~~~~--Lkp-gG~lv~~ 181 (226)
T 1i1n_A 136 QLVVGDGRMGYAE-EAPYDAIHVGAAA--PVV---PQALIDQ--LKP-GGRLILP 181 (226)
T ss_dssp EEEESCGGGCCGG-GCCEEEEEECSBB--SSC---CHHHHHT--EEE-EEEEEEE
T ss_pred EEEECCcccCccc-CCCcCEEEECCch--HHH---HHHHHHh--cCC-CcEEEEE
Confidence 9999999865432 4689999999876 443 3566676 776 8877764
No 92
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.26 E-value=4.3e-11 Score=103.40 Aligned_cols=114 Identities=8% Similarity=-0.084 Sum_probs=89.5
Q ss_pred HHHHHHHHhh---CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchh
Q 042616 29 GEFISALAAG---NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQ 103 (220)
Q Consensus 29 ~~~L~~La~~---~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~ 103 (220)
.+.+..++.. .+..+||||||| +|..++.|+... +.+|++||++ +++++.|++++. ++.++++++++|+.
T Consensus 58 ~~~~~~~~~~~~~~~~~~vLDiGcG-~G~~~~~la~~~---~~~v~gvD~s-~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 132 (302)
T 3hem_A 58 YAKRKLALDKLNLEPGMTLLDIGCG-WGSTMRHAVAEY---DVNVIGLTLS-ENQYAHDKAMFDEVDSPRRKEVRIQGWE 132 (302)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCT-TSHHHHHHHHHH---CCEEEEEECC-HHHHHHHHHHHHHSCCSSCEEEEECCGG
T ss_pred HHHHHHHHHHcCCCCcCEEEEeecc-CcHHHHHHHHhC---CCEEEEEECC-HHHHHHHHHHHHhcCCCCceEEEECCHH
Confidence 3444444443 456799999997 999999999865 4799999999 999999999987 67678999999998
Q ss_pred hhhhhcCCCccEEEEcCCC----------CCccHHHHHHHHHhhcCCCCCCEEEEEecCCC
Q 042616 104 KLLMGDYRGADFVLIDCNI----------DIDGHKNVFRAAKESVMHGSGAGVIVGYNALP 154 (220)
Q Consensus 104 ~~L~~~~~~~D~VfiD~~k----------~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~~ 154 (220)
++ .++||+|+....- ...++..+++.+.+. |+| ||.+++.....
T Consensus 133 ~~----~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~--Lkp-gG~l~i~~~~~ 186 (302)
T 3hem_A 133 EF----DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNL--TPD-DGRMLLHTITI 186 (302)
T ss_dssp GC----CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHS--SCT-TCEEEEEEEEC
T ss_pred Hc----CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHh--cCC-CcEEEEEEEec
Confidence 75 4789999975422 004568999999998 886 88877765543
No 93
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.26 E-value=4.9e-11 Score=101.91 Aligned_cols=102 Identities=14% Similarity=0.164 Sum_probs=84.0
Q ss_pred CCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhcCCCccEEEE
Q 042616 41 AQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGDYRGADFVLI 118 (220)
Q Consensus 41 a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~~~~~D~Vfi 118 (220)
+.+||||||| +|..+..|+.. +.+|++||++ +.+++.|++++. ++..+++++++|+.+..+...++||+|+.
T Consensus 69 ~~~vLDiGcG-~G~~~~~l~~~----~~~v~gvD~s-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 142 (285)
T 4htf_A 69 KLRVLDAGGG-EGQTAIKMAER----GHQVILCDLS-AQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILF 142 (285)
T ss_dssp CCEEEEETCT-TCHHHHHHHHT----TCEEEEEESC-HHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEE
T ss_pred CCEEEEeCCc-chHHHHHHHHC----CCEEEEEECC-HHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEE
Confidence 5699999997 99999999875 6799999999 999999999987 66578999999998865343578999998
Q ss_pred cCCCC-CccHHHHHHHHHhhcCCCCCCEEEEEec
Q 042616 119 DCNID-IDGHKNVFRAAKESVMHGSGAGVIVGYN 151 (220)
Q Consensus 119 D~~k~-~~~y~~~l~~l~~~~~L~~~Ggviv~dN 151 (220)
..... -.+...+++.+.+. |+| ||++++..
T Consensus 143 ~~~l~~~~~~~~~l~~~~~~--Lkp-gG~l~~~~ 173 (285)
T 4htf_A 143 HAVLEWVADPRSVLQTLWSV--LRP-GGVLSLMF 173 (285)
T ss_dssp ESCGGGCSCHHHHHHHHHHT--EEE-EEEEEEEE
T ss_pred CchhhcccCHHHHHHHHHHH--cCC-CeEEEEEE
Confidence 76441 14567899999998 886 88877653
No 94
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.26 E-value=8.2e-12 Score=101.05 Aligned_cols=119 Identities=8% Similarity=0.078 Sum_probs=72.6
Q ss_pred ChhHHHHHHHHHhh----CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEc
Q 042616 25 EPDVGEFISALAAG----NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKG 100 (220)
Q Consensus 25 ~p~~~~~L~~La~~----~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~g 100 (220)
.|+...++..+... .++.+|||+||| +|..++.++...+ +.+++++|.+ +.+++.|++++.....+++++++
T Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G-~G~~~~~l~~~~~--~~~v~~vD~~-~~~~~~a~~~~~~~~~~~~~~~~ 86 (215)
T 4dzr_A 11 RPDTEVLVEEAIRFLKRMPSGTRVIDVGTG-SGCIAVSIALACP--GVSVTAVDLS-MDALAVARRNAERFGAVVDWAAA 86 (215)
T ss_dssp CHHHHHHHHHHHHHHTTCCTTEEEEEEESS-BCHHHHHHHHHCT--TEEEEEEECC--------------------CCHH
T ss_pred CccHHHHHHHHHHHhhhcCCCCEEEEecCC-HhHHHHHHHHhCC--CCeEEEEECC-HHHHHHHHHHHHHhCCceEEEEc
Confidence 34555555555443 678899999997 9999999998753 5799999999 99999999998722127999999
Q ss_pred chhhhhhh---cCCCccEEEEcCCCCC---------------------------ccHHHHHHHHHhhcCCCCCCEE-EEE
Q 042616 101 DAQKLLMG---DYRGADFVLIDCNIDI---------------------------DGHKNVFRAAKESVMHGSGAGV-IVG 149 (220)
Q Consensus 101 da~~~L~~---~~~~~D~VfiD~~k~~---------------------------~~y~~~l~~l~~~~~L~~~Ggv-iv~ 149 (220)
|+.+.++. ..++||+|+.|.+-.. ..|..+++.+.+. |+| ||. +++
T Consensus 87 d~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--Lkp-gG~l~~~ 163 (215)
T 4dzr_A 87 DGIEWLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYV--LAR-GRAGVFL 163 (215)
T ss_dssp HHHHHHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGG--BCS-SSEEEEE
T ss_pred chHhhhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHH--hcC-CCeEEEE
Confidence 99986653 1378999999754200 1126677777887 876 777 555
Q ss_pred e
Q 042616 150 Y 150 (220)
Q Consensus 150 d 150 (220)
.
T Consensus 164 ~ 164 (215)
T 4dzr_A 164 E 164 (215)
T ss_dssp E
T ss_pred E
Confidence 4
No 95
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.26 E-value=3.4e-11 Score=99.58 Aligned_cols=113 Identities=14% Similarity=0.067 Sum_probs=89.9
Q ss_pred CCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcc
Q 042616 22 RGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGD 101 (220)
Q Consensus 22 ~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gd 101 (220)
....|...+.+..++...+..+||||||| +|+.+..|+.. +++|+++|++ +.+++.|++++.... +++++++|
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~----~~~v~~vD~~-~~~~~~a~~~~~~~~-~v~~~~~d 124 (231)
T 1vbf_A 52 NTTALNLGIFMLDELDLHKGQKVLEIGTG-IGYYTALIAEI----VDKVVSVEIN-EKMYNYASKLLSYYN-NIKLILGD 124 (231)
T ss_dssp EECCHHHHHHHHHHTTCCTTCEEEEECCT-TSHHHHHHHHH----SSEEEEEESC-HHHHHHHHHHHTTCS-SEEEEESC
T ss_pred ccCCHHHHHHHHHhcCCCCCCEEEEEcCC-CCHHHHHHHHH----cCEEEEEeCC-HHHHHHHHHHHhhcC-CeEEEECC
Confidence 45677777777777777788999999997 89999999986 3799999999 999999999987433 89999999
Q ss_pred hhhhhhhcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 102 AQKLLMGDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 102 a~~~L~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
+.+.++. .++||+|+++... .... +.+.+. |+| ||.+++.
T Consensus 125 ~~~~~~~-~~~fD~v~~~~~~--~~~~---~~~~~~--L~p-gG~l~~~ 164 (231)
T 1vbf_A 125 GTLGYEE-EKPYDRVVVWATA--PTLL---CKPYEQ--LKE-GGIMILP 164 (231)
T ss_dssp GGGCCGG-GCCEEEEEESSBB--SSCC---HHHHHT--EEE-EEEEEEE
T ss_pred ccccccc-CCCccEEEECCcH--HHHH---HHHHHH--cCC-CcEEEEE
Confidence 9885542 4689999999876 4333 456666 776 8877765
No 96
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.25 E-value=5.1e-11 Score=98.70 Aligned_cols=103 Identities=11% Similarity=-0.024 Sum_probs=80.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhc-CCCccE
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGD-YRGADF 115 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~-~~~~D~ 115 (220)
.+..+||||||| +|..++.||...+ +.++++||.+ +.+++.|+++++ ++ .+|+++++|+.++...+ .+.||.
T Consensus 37 ~~~~~vLDiGcG-~G~~~~~la~~~p--~~~v~giD~s-~~~l~~a~~~~~~~~~-~nv~~~~~d~~~l~~~~~~~~~d~ 111 (213)
T 2fca_A 37 NDNPIHIEVGTG-KGQFISGMAKQNP--DINYIGIELF-KSVIVTAVQKVKDSEA-QNVKLLNIDADTLTDVFEPGEVKR 111 (213)
T ss_dssp SCCCEEEEECCT-TSHHHHHHHHHCT--TSEEEEECSC-HHHHHHHHHHHHHSCC-SSEEEECCCGGGHHHHCCTTSCCE
T ss_pred CCCceEEEEecC-CCHHHHHHHHHCC--CCCEEEEEec-hHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhcCcCCcCE
Confidence 457889999997 9999999998754 6899999999 999999999987 55 57999999998843212 367999
Q ss_pred EEEcCCCC---------CccHHHHHHHHHhhcCCCCCCEEEEE
Q 042616 116 VLIDCNID---------IDGHKNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 116 VfiD~~k~---------~~~y~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
|++..... .-.+..+++.+.+. |+| ||.+++
T Consensus 112 v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~--Lkp-gG~l~~ 151 (213)
T 2fca_A 112 VYLNFSDPWPKKRHEKRRLTYSHFLKKYEEV--MGK-GGSIHF 151 (213)
T ss_dssp EEEESCCCCCSGGGGGGSTTSHHHHHHHHHH--HTT-SCEEEE
T ss_pred EEEECCCCCcCccccccccCcHHHHHHHHHH--cCC-CCEEEE
Confidence 99854320 01157889999998 887 776654
No 97
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.25 E-value=7.9e-11 Score=100.86 Aligned_cols=118 Identities=10% Similarity=0.082 Sum_probs=92.2
Q ss_pred CChhHHHHHHHHHhh--CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEE
Q 042616 24 KEPDVGEFISALAAG--NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVK 99 (220)
Q Consensus 24 ~~p~~~~~L~~La~~--~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~ 99 (220)
..|+...++..+... .++.+|||+||| +|..++.|+...+ +.+|+++|.+ +.+++.|+++++ ++ .++++++
T Consensus 91 pr~~te~l~~~~l~~~~~~~~~vLDlG~G-sG~~~~~la~~~~--~~~v~~vD~s-~~~l~~a~~n~~~~~~-~~v~~~~ 165 (276)
T 2b3t_A 91 PRPDTECLVEQALARLPEQPCRILDLGTG-TGAIALALASERP--DCEIIAVDRM-PDAVSLAQRNAQHLAI-KNIHILQ 165 (276)
T ss_dssp CCTTHHHHHHHHHHHSCSSCCEEEEETCT-TSHHHHHHHHHCT--TSEEEEECSS-HHHHHHHHHHHHHHTC-CSEEEEC
T ss_pred cCchHHHHHHHHHHhcccCCCEEEEecCC-ccHHHHHHHHhCC--CCEEEEEECC-HHHHHHHHHHHHHcCC-CceEEEE
Confidence 346666666666554 457899999997 9999999998764 5899999999 999999999997 55 4799999
Q ss_pred cchhhhhhhcCCCccEEEEcCCCCC--------------------------ccHHHHHHHHHhhcCCCCCCEEEEEec
Q 042616 100 GDAQKLLMGDYRGADFVLIDCNIDI--------------------------DGHKNVFRAAKESVMHGSGAGVIVGYN 151 (220)
Q Consensus 100 gda~~~L~~~~~~~D~VfiD~~k~~--------------------------~~y~~~l~~l~~~~~L~~~Ggviv~dN 151 (220)
+|+.+.++ .++||+|+.+.+-.. ..|..+++.+.+. |+| ||.+++..
T Consensus 166 ~d~~~~~~--~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~--Lkp-gG~l~~~~ 238 (276)
T 2b3t_A 166 SDWFSALA--GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNA--LVS-GGFLLLEH 238 (276)
T ss_dssp CSTTGGGT--TCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGG--EEE-EEEEEEEC
T ss_pred cchhhhcc--cCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHh--cCC-CCEEEEEE
Confidence 99988664 368999999853200 2357778888888 876 88887753
No 98
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.25 E-value=8e-11 Score=104.57 Aligned_cols=120 Identities=13% Similarity=0.078 Sum_probs=95.5
Q ss_pred CCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEE
Q 042616 22 RGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVK 99 (220)
Q Consensus 22 ~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~ 99 (220)
..+.+..++.+..++...+...|||+||| +|..++.+|....+ ..+++++|.| +.+++.|++|++ ++. +|++++
T Consensus 185 a~l~~~la~~l~~~~~~~~~~~vLD~gcG-sG~~~ie~a~~~~~-~~~v~g~Di~-~~~i~~a~~n~~~~g~~-~i~~~~ 260 (354)
T 3tma_A 185 GSLTPVLAQALLRLADARPGMRVLDPFTG-SGTIALEAASTLGP-TSPVYAGDLD-EKRLGLAREAALASGLS-WIRFLR 260 (354)
T ss_dssp CSCCHHHHHHHHHHTTCCTTCCEEESSCT-TSHHHHHHHHHHCT-TSCEEEEESC-HHHHHHHHHHHHHTTCT-TCEEEE
T ss_pred CCcCHHHHHHHHHHhCCCCCCEEEeCCCC-cCHHHHHHHHhhCC-CceEEEEECC-HHHHHHHHHHHHHcCCC-ceEEEe
Confidence 34666777777777777778899999997 99999999987633 5899999999 999999999997 775 899999
Q ss_pred cchhhhhhhcCCCccEEEEcCCCCC---------ccHHHHHHHHHhhcCCCCCCEEEEE
Q 042616 100 GDAQKLLMGDYRGADFVLIDCNIDI---------DGHKNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 100 gda~~~L~~~~~~~D~VfiD~~k~~---------~~y~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
+|+.++.+. ...||+|+.|.+-.. ..|..+++.+.+. |+| ||.+++
T Consensus 261 ~D~~~~~~~-~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~--Lkp-gG~l~i 315 (354)
T 3tma_A 261 ADARHLPRF-FPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALAL--LPP-GGRVAL 315 (354)
T ss_dssp CCGGGGGGT-CCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHT--SCT-TCEEEE
T ss_pred CChhhCccc-cCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHh--cCC-CcEEEE
Confidence 999996533 456899999976410 1257788888888 876 666555
No 99
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.25 E-value=1.1e-10 Score=101.44 Aligned_cols=116 Identities=8% Similarity=0.064 Sum_probs=88.0
Q ss_pred CChhHHHHHHHHHh---hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEE
Q 042616 24 KEPDVGEFISALAA---GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFV 98 (220)
Q Consensus 24 ~~p~~~~~L~~La~---~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v 98 (220)
..|+...++..+.. ..+..+|||+||| +|..++.|+.. + +.+|+++|.+ +++++.|++|++ ++.++++++
T Consensus 104 pr~~te~lv~~~l~~~~~~~~~~vLDlG~G-sG~~~~~la~~-~--~~~v~~vDis-~~al~~A~~n~~~~~l~~~v~~~ 178 (284)
T 1nv8_A 104 PRPETEELVELALELIRKYGIKTVADIGTG-SGAIGVSVAKF-S--DAIVFATDVS-SKAVEIARKNAERHGVSDRFFVR 178 (284)
T ss_dssp CCTTHHHHHHHHHHHHHHHTCCEEEEESCT-TSHHHHHHHHH-S--SCEEEEEESC-HHHHHHHHHHHHHTTCTTSEEEE
T ss_pred cChhHHHHHHHHHHHhcccCCCEEEEEeCc-hhHHHHHHHHC-C--CCEEEEEECC-HHHHHHHHHHHHHcCCCCceEEE
Confidence 44555555554443 2356799999997 99999999987 3 6899999999 999999999997 676679999
Q ss_pred EcchhhhhhhcCCCc---cEEEEcCCCCC--------------------ccHHHHHHHHH-hhcCCCCCCEEEEEe
Q 042616 99 KGDAQKLLMGDYRGA---DFVLIDCNIDI--------------------DGHKNVFRAAK-ESVMHGSGAGVIVGY 150 (220)
Q Consensus 99 ~gda~~~L~~~~~~~---D~VfiD~~k~~--------------------~~y~~~l~~l~-~~~~L~~~Ggviv~d 150 (220)
++|+.+.++ ++| |+|+.+.+--. .+-...++.+. +. |+| ||.+++.
T Consensus 179 ~~D~~~~~~---~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~--l~p-gG~l~~e 248 (284)
T 1nv8_A 179 KGEFLEPFK---EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRY--DTS-GKIVLME 248 (284)
T ss_dssp ESSTTGGGG---GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHC--CCT-TCEEEEE
T ss_pred ECcchhhcc---cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhc--CCC-CCEEEEE
Confidence 999998664 367 99999854300 00126788888 87 765 8888774
No 100
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.24 E-value=4.6e-11 Score=107.99 Aligned_cols=109 Identities=16% Similarity=0.192 Sum_probs=87.3
Q ss_pred HHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--cc-CCcEEEEEcchhhhhhhc--
Q 042616 35 LAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RY-ANCIEFVKGDAQKLLMGD-- 109 (220)
Q Consensus 35 La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~-~~~Ve~v~gda~~~L~~~-- 109 (220)
++...+.++|||+||| +|..++.+|... .++|++||.+ +.+++.|++|++ ++ .++++++++|+.+.++.+
T Consensus 215 l~~~~~~~~VLDl~cG-~G~~sl~la~~g---~~~V~~vD~s-~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~ 289 (396)
T 3c0k_A 215 TRRYVENKRVLNCFSY-TGGFAVSALMGG---CSQVVSVDTS-QEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRD 289 (396)
T ss_dssp HHHHCTTCEEEEESCT-TCSHHHHHHHTT---CSEEEEEESC-HHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHH
T ss_pred HHHhhCCCeEEEeecc-CCHHHHHHHHCC---CCEEEEEECC-HHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHh
Confidence 3334678899999997 999999998741 3699999999 999999999997 66 558999999999987653
Q ss_pred -CCCccEEEEcCCCCC----------ccHHHHHHHHHhhcCCCCCCEEEEEec
Q 042616 110 -YRGADFVLIDCNIDI----------DGHKNVFRAAKESVMHGSGAGVIVGYN 151 (220)
Q Consensus 110 -~~~~D~VfiD~~k~~----------~~y~~~l~~l~~~~~L~~~Ggviv~dN 151 (220)
...||+|++|++.-. ..+.+.+..+.+. |+| ||++++.+
T Consensus 290 ~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~--Lkp-gG~l~~~~ 339 (396)
T 3c0k_A 290 RGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQL--LNE-GGILLTFS 339 (396)
T ss_dssp TTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHT--EEE-EEEEEEEE
T ss_pred cCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHh--cCC-CcEEEEEe
Confidence 358999999986511 3567888888888 876 77766643
No 101
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.24 E-value=3.7e-11 Score=108.53 Aligned_cols=103 Identities=16% Similarity=0.108 Sum_probs=84.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhc---CCCcc
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGD---YRGAD 114 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~---~~~~D 114 (220)
+.++|||+||| +|..++.+|.. ..++|+++|.+ +.+++.|++|++ ++.++++++++|+.+.++.+ ...||
T Consensus 217 ~~~~VLDl~~G-~G~~~~~la~~---g~~~v~~vD~s-~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD 291 (396)
T 2as0_A 217 PGDRVLDVFTY-TGGFAIHAAIA---GADEVIGIDKS-PRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFD 291 (396)
T ss_dssp TTCEEEETTCT-TTHHHHHHHHT---TCSEEEEEESC-HHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred CCCeEEEecCC-CCHHHHHHHHC---CCCEEEEEeCC-HHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCC
Confidence 67899999997 99999999874 14699999999 999999999997 66458999999999987643 46899
Q ss_pred EEEEcCCCCC----------ccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 115 FVLIDCNIDI----------DGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 115 ~VfiD~~k~~----------~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
+|++|++.-. ..+.+++..+.+. |+| ||++++-
T Consensus 292 ~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~--Lkp-gG~lv~~ 334 (396)
T 2as0_A 292 IVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNL--VKD-GGILVTC 334 (396)
T ss_dssp EEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTT--EEE-EEEEEEE
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHh--cCC-CcEEEEE
Confidence 9999987611 3467788888888 876 8865554
No 102
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.24 E-value=5e-11 Score=108.42 Aligned_cols=101 Identities=13% Similarity=0.073 Sum_probs=81.7
Q ss_pred CCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhcCCCccEEEE
Q 042616 41 AQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGDYRGADFVLI 118 (220)
Q Consensus 41 a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~~~~~D~Vfi 118 (220)
.++|||+||| +|..|+.+|.. +.+|++||.+ +.+++.|++|++ ++.. ++.++|+.+.++...+.||+|++
T Consensus 215 g~~VLDlg~G-tG~~sl~~a~~----ga~V~avDis-~~al~~a~~n~~~ng~~~--~~~~~D~~~~l~~~~~~fD~Ii~ 286 (393)
T 4dmg_A 215 GERVLDVYSY-VGGFALRAARK----GAYALAVDKD-LEALGVLDQAALRLGLRV--DIRHGEALPTLRGLEGPFHHVLL 286 (393)
T ss_dssp TCEEEEESCT-TTHHHHHHHHT----TCEEEEEESC-HHHHHHHHHHHHHHTCCC--EEEESCHHHHHHTCCCCEEEEEE
T ss_pred CCeEEEcccc-hhHHHHHHHHc----CCeEEEEECC-HHHHHHHHHHHHHhCCCC--cEEEccHHHHHHHhcCCCCEEEE
Confidence 7899999996 99999999874 5569999999 999999999997 6643 46699999998765555999999
Q ss_pred cCCCCC----------ccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 119 DCNIDI----------DGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 119 D~~k~~----------~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
|++.-. ..|.++++.+.+. |+| ||+++.-..
T Consensus 287 dpP~f~~~~~~~~~~~~~~~~ll~~a~~~--Lkp-GG~Lv~~s~ 327 (393)
T 4dmg_A 287 DPPTLVKRPEELPAMKRHLVDLVREALRL--LAE-EGFLWLSSC 327 (393)
T ss_dssp CCCCCCSSGGGHHHHHHHHHHHHHHHHHT--EEE-EEEEEEEEC
T ss_pred CCCcCCCCHHHHHHHHHHHHHHHHHHHHh--cCC-CCEEEEEEC
Confidence 987411 3567888888888 876 888874433
No 103
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.24 E-value=2e-11 Score=99.81 Aligned_cols=110 Identities=11% Similarity=0.032 Sum_probs=85.8
Q ss_pred HHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhh
Q 042616 29 GEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMG 108 (220)
Q Consensus 29 ~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~ 108 (220)
.+++..+....++.+|||+||| +|..+..|+.. +.+|+++|.+ +.+++.|++++... .+++++++|+.+..+
T Consensus 40 ~~~l~~~~~~~~~~~vLDiGcG-~G~~~~~l~~~----~~~v~~vD~s-~~~~~~a~~~~~~~-~~~~~~~~d~~~~~~- 111 (216)
T 3ofk_A 40 TQLLRLSLSSGAVSNGLEIGCA-AGAFTEKLAPH----CKRLTVIDVM-PRAIGRACQRTKRW-SHISWAATDILQFST- 111 (216)
T ss_dssp HHHHHHHTTTSSEEEEEEECCT-TSHHHHHHGGG----EEEEEEEESC-HHHHHHHHHHTTTC-SSEEEEECCTTTCCC-
T ss_pred HHHHHHHcccCCCCcEEEEcCC-CCHHHHHHHHc----CCEEEEEECC-HHHHHHHHHhcccC-CCeEEEEcchhhCCC-
Confidence 3555555556667899999997 99999998875 5699999999 99999999998743 489999999988653
Q ss_pred cCCCccEEEEcCCCC----CccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 109 DYRGADFVLIDCNID----IDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 109 ~~~~~D~VfiD~~k~----~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
.++||+|+...... .......++.+.+. |+| ||++++.
T Consensus 112 -~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~--L~p-gG~l~~~ 153 (216)
T 3ofk_A 112 -AELFDLIVVAEVLYYLEDMTQMRTAIDNMVKM--LAP-GGHLVFG 153 (216)
T ss_dssp -SCCEEEEEEESCGGGSSSHHHHHHHHHHHHHT--EEE-EEEEEEE
T ss_pred -CCCccEEEEccHHHhCCCHHHHHHHHHHHHHH--cCC-CCEEEEE
Confidence 57899999874331 02335678999998 876 8887774
No 104
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.23 E-value=2.4e-11 Score=105.93 Aligned_cols=101 Identities=12% Similarity=0.076 Sum_probs=84.0
Q ss_pred hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhcCCCccE
Q 042616 38 GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGDYRGADF 115 (220)
Q Consensus 38 ~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~~~~~D~ 115 (220)
..+.+.|||+||| +|++|+.+|... ..+|+++|.| |.+++.+++|++ ++.++|+++++|+.++++ .+.||.
T Consensus 123 ~~~g~~VlD~~aG-~G~~~i~~a~~g---~~~V~avD~n-p~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~--~~~~D~ 195 (278)
T 3k6r_A 123 AKPDELVVDMFAG-IGHLSLPIAVYG---KAKVIAIEKD-PYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG--ENIADR 195 (278)
T ss_dssp CCTTCEEEETTCT-TTTTTHHHHHHT---CCEEEEECCC-HHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC--CSCEEE
T ss_pred cCCCCEEEEecCc-CcHHHHHHHHhc---CCeEEEEECC-HHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc--ccCCCE
Confidence 3557899999997 999999888752 3699999999 999999999998 888899999999999775 378999
Q ss_pred EEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEec
Q 042616 116 VLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYN 151 (220)
Q Consensus 116 VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dN 151 (220)
|++|.+. . ..++++.+.+. |++ ||+|.++.
T Consensus 196 Vi~~~p~--~-~~~~l~~a~~~--lk~-gG~ih~~~ 225 (278)
T 3k6r_A 196 ILMGYVV--R-THEFIPKALSI--AKD-GAIIHYHN 225 (278)
T ss_dssp EEECCCS--S-GGGGHHHHHHH--EEE-EEEEEEEE
T ss_pred EEECCCC--c-HHHHHHHHHHH--cCC-CCEEEEEe
Confidence 9999876 2 24567777777 765 99887764
No 105
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.23 E-value=4.3e-11 Score=99.00 Aligned_cols=105 Identities=10% Similarity=0.092 Sum_probs=82.7
Q ss_pred hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccEEE
Q 042616 38 GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFVL 117 (220)
Q Consensus 38 ~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~Vf 117 (220)
..++.+|||+||| +|..+..|+...+ +.+++++|++ +.+++.|++++.... +++++++|+.+.... ++||+|+
T Consensus 42 ~~~~~~vLDiG~G-~G~~~~~l~~~~~--~~~v~~vD~s-~~~~~~a~~~~~~~~-~~~~~~~d~~~~~~~--~~fD~v~ 114 (234)
T 3dtn_A 42 DTENPDILDLGAG-TGLLSAFLMEKYP--EATFTLVDMS-EKMLEIAKNRFRGNL-KVKYIEADYSKYDFE--EKYDMVV 114 (234)
T ss_dssp SCSSCEEEEETCT-TSHHHHHHHHHCT--TCEEEEEESC-HHHHHHHHHHTCSCT-TEEEEESCTTTCCCC--SCEEEEE
T ss_pred CCCCCeEEEecCC-CCHHHHHHHHhCC--CCeEEEEECC-HHHHHHHHHhhccCC-CEEEEeCchhccCCC--CCceEEE
Confidence 4567899999997 9999999998764 6899999999 999999999987442 899999999885433 7899999
Q ss_pred EcCCCCCc---cHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 118 IDCNIDID---GHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 118 iD~~k~~~---~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
.......- .....++.+.+. |+| ||.+++-+.
T Consensus 115 ~~~~l~~~~~~~~~~~l~~~~~~--Lkp-gG~l~~~~~ 149 (234)
T 3dtn_A 115 SALSIHHLEDEDKKELYKRSYSI--LKE-SGIFINADL 149 (234)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHH--EEE-EEEEEEEEE
T ss_pred EeCccccCCHHHHHHHHHHHHHh--cCC-CcEEEEEEe
Confidence 88654111 122478999998 887 777665443
No 106
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.23 E-value=3.5e-11 Score=108.37 Aligned_cols=102 Identities=17% Similarity=0.083 Sum_probs=84.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhc---CCCcc
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGD---YRGAD 114 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~---~~~~D 114 (220)
+.++|||+||| +|..++.+|.. +.+|+++|.+ +.+++.|++|++ ++. +++++++|+.+.++.+ ..+||
T Consensus 209 ~~~~VLDlg~G-~G~~~~~la~~----~~~v~~vD~s-~~~~~~a~~n~~~n~~~-~~~~~~~d~~~~~~~~~~~~~~fD 281 (382)
T 1wxx_A 209 RGERALDVFSY-AGGFALHLALG----FREVVAVDSS-AEALRRAEENARLNGLG-NVRVLEANAFDLLRRLEKEGERFD 281 (382)
T ss_dssp CEEEEEEETCT-TTHHHHHHHHH----EEEEEEEESC-HHHHHHHHHHHHHTTCT-TEEEEESCHHHHHHHHHHTTCCEE
T ss_pred CCCeEEEeeec-cCHHHHHHHHh----CCEEEEEECC-HHHHHHHHHHHHHcCCC-CceEEECCHHHHHHHHHhcCCCee
Confidence 67899999997 99999999986 4799999999 999999999997 664 4999999999988654 46899
Q ss_pred EEEEcCCCCC----------ccHHHHHHHHHhhcCCCCCCEEEEEec
Q 042616 115 FVLIDCNIDI----------DGHKNVFRAAKESVMHGSGAGVIVGYN 151 (220)
Q Consensus 115 ~VfiD~~k~~----------~~y~~~l~~l~~~~~L~~~Ggviv~dN 151 (220)
+|++|++.-. ..|.++++.+.+. |+| ||++++..
T Consensus 282 ~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~--Lkp-gG~l~~~~ 325 (382)
T 1wxx_A 282 LVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKL--LKE-GGILATAS 325 (382)
T ss_dssp EEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHT--EEE-EEEEEEEE
T ss_pred EEEECCCCCCCChhHHHHHHHHHHHHHHHHHHh--cCC-CCEEEEEE
Confidence 9999987511 3467788888888 876 77766543
No 107
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.23 E-value=3.3e-11 Score=98.10 Aligned_cols=114 Identities=6% Similarity=-0.047 Sum_probs=89.4
Q ss_pred hhHHHHHHHHHh-hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcch
Q 042616 26 PDVGEFISALAA-GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDA 102 (220)
Q Consensus 26 p~~~~~L~~La~-~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda 102 (220)
+....++..+.. ..+..+|||+||| +|..++.|+.. ...+|+++|.+ +.+++.|++++. ++.+ ++++++|+
T Consensus 45 ~~~~~~~~~l~~~~~~~~~vLDiG~G-~G~~~~~l~~~---~~~~v~~vD~s-~~~~~~a~~~~~~~~~~~-v~~~~~d~ 118 (205)
T 3grz_A 45 QTTQLAMLGIERAMVKPLTVADVGTG-SGILAIAAHKL---GAKSVLATDIS-DESMTAAEENAALNGIYD-IALQKTSL 118 (205)
T ss_dssp HHHHHHHHHHHHHCSSCCEEEEETCT-TSHHHHHHHHT---TCSEEEEEESC-HHHHHHHHHHHHHTTCCC-CEEEESST
T ss_pred ccHHHHHHHHHHhccCCCEEEEECCC-CCHHHHHHHHC---CCCEEEEEECC-HHHHHHHHHHHHHcCCCc-eEEEeccc
Confidence 344455555544 3457899999997 89999998863 24699999999 999999999997 5533 99999999
Q ss_pred hhhhhhcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 103 QKLLMGDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 103 ~~~L~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
.+.. .++||+|+.+... ..+...++.+.+. |+| ||.+++....
T Consensus 119 ~~~~---~~~fD~i~~~~~~--~~~~~~l~~~~~~--L~~-gG~l~~~~~~ 161 (205)
T 3grz_A 119 LADV---DGKFDLIVANILA--EILLDLIPQLDSH--LNE-DGQVIFSGID 161 (205)
T ss_dssp TTTC---CSCEEEEEEESCH--HHHHHHGGGSGGG--EEE-EEEEEEEEEE
T ss_pred cccC---CCCceEEEECCcH--HHHHHHHHHHHHh--cCC-CCEEEEEecC
Confidence 8754 3789999999877 6677888888888 876 8887775433
No 108
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.23 E-value=1.1e-10 Score=107.45 Aligned_cols=173 Identities=12% Similarity=-0.019 Sum_probs=109.8
Q ss_pred hhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHH-------HHHhc--ccC-CcE
Q 042616 26 PDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDAS-------KKSLG--RYA-NCI 95 (220)
Q Consensus 26 p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~A-------r~~l~--g~~-~~V 95 (220)
|.....+..++...+..+||||||| +|+.++.||...+ ..+|++||.+ +..++.| +++++ |+. ++|
T Consensus 228 p~~v~~ml~~l~l~~g~~VLDLGCG-sG~la~~LA~~~g--~~~V~GVDis-~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV 303 (433)
T 1u2z_A 228 PNFLSDVYQQCQLKKGDTFMDLGSG-VGNCVVQAALECG--CALSFGCEIM-DDASDLTILQYEELKKRCKLYGMRLNNV 303 (433)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEESCT-TSHHHHHHHHHHC--CSEEEEEECC-HHHHHHHHHHHHHHHHHHHHTTBCCCCE
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCC-cCHHHHHHHHHCC--CCEEEEEeCC-HHHHHHHHHhHHHHHHHHHHcCCCCCce
Confidence 4444444444466678899999997 9999999998654 3699999999 9999999 77775 543 689
Q ss_pred EEEEcchhhh---hhhcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCCCCCCccceEEEeeecCCcE
Q 042616 96 EFVKGDAQKL---LMGDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNALPKGSWRGYKTHFLPIGEGL 172 (220)
Q Consensus 96 e~v~gda~~~---L~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~~~g~~~~~~s~~lPig~Gl 172 (220)
+++++|.... ++...++||+||+....-..+....++.+.+. |+| ||.||+.+.+.+..|+--......+.+.+
T Consensus 304 ~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l~~~d~~~~L~el~r~--LKp-GG~lVi~d~f~p~~~~i~~~~l~~i~~~~ 380 (433)
T 1u2z_A 304 EFSLKKSFVDNNRVAELIPQCDVILVNNFLFDEDLNKKVEKILQT--AKV-GCKIISLKSLRSLTYQINFYNVENIFNRL 380 (433)
T ss_dssp EEEESSCSTTCHHHHHHGGGCSEEEECCTTCCHHHHHHHHHHHTT--CCT-TCEEEESSCSSCTTCCCCSSSTTCGGGGE
T ss_pred EEEEcCccccccccccccCCCCEEEEeCccccccHHHHHHHHHHh--CCC-CeEEEEeeccCCcccccccccccchhccc
Confidence 9999865421 21113689999986432114567778888888 876 89888887765442220000111233445
Q ss_pred EEEEEeecCCCC--CCCcCcCceEecccCCCceeE
Q 042616 173 LVTRIGENSDVG--GGRKRSRWVVTVDKCTGEEHV 205 (220)
Q Consensus 173 ~v~~~~~~~~~~--~~~~~~~w~~~~d~~~~~~~~ 205 (220)
.+..+..-.+.. ....-+-|+-.|++.-=|+.+
T Consensus 381 ~v~~~~~~~~~vsW~~~~~~yyl~tv~~~~~e~~~ 415 (433)
T 1u2z_A 381 KVQRYDLKEDSVSWTHSGGEYYISTVMEDVDESLF 415 (433)
T ss_dssp EEEEEECCTTCBTTBSSCCEEEEEEECSSCCGGGS
T ss_pred chheecccccccccccCCccEEEEEechhhhHhhh
Confidence 555553222111 123345566666665555443
No 109
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.23 E-value=6.9e-11 Score=98.43 Aligned_cols=104 Identities=13% Similarity=-0.033 Sum_probs=80.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhh--hhhcCCCccEE
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKL--LMGDYRGADFV 116 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~--L~~~~~~~D~V 116 (220)
.+..+|||+||| +|..+..|+....+ +++|++||.+ +.+++.+.++.+.. .+++++++|+.+. ++...++||+|
T Consensus 76 ~~~~~vLDlG~G-~G~~~~~la~~~g~-~~~v~gvD~s-~~~i~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~~~~D~V 151 (233)
T 2ipx_A 76 KPGAKVLYLGAA-SGTTVSHVSDIVGP-DGLVYAVEFS-HRSGRDLINLAKKR-TNIIPVIEDARHPHKYRMLIAMVDVI 151 (233)
T ss_dssp CTTCEEEEECCT-TSHHHHHHHHHHCT-TCEEEEECCC-HHHHHHHHHHHHHC-TTEEEECSCTTCGGGGGGGCCCEEEE
T ss_pred CCCCEEEEEccc-CCHHHHHHHHHhCC-CcEEEEEECC-HHHHHHHHHHhhcc-CCeEEEEcccCChhhhcccCCcEEEE
Confidence 456799999997 99999999988644 5899999999 98877777776532 6799999999874 34335789999
Q ss_pred EEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 117 LIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 117 fiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
+.|... ......+++.+.+. |+| ||.+++.
T Consensus 152 ~~~~~~-~~~~~~~~~~~~~~--Lkp-gG~l~i~ 181 (233)
T 2ipx_A 152 FADVAQ-PDQTRIVALNAHTF--LRN-GGHFVIS 181 (233)
T ss_dssp EECCCC-TTHHHHHHHHHHHH--EEE-EEEEEEE
T ss_pred EEcCCC-ccHHHHHHHHHHHH--cCC-CeEEEEE
Confidence 999875 13335557778888 876 8887773
No 110
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.23 E-value=2.6e-11 Score=110.46 Aligned_cols=102 Identities=13% Similarity=0.037 Sum_probs=85.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCc-EEEEEcchhhhhh-hcCCCcc
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANC-IEFVKGDAQKLLM-GDYRGAD 114 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~-Ve~v~gda~~~L~-~~~~~~D 114 (220)
.+..+|||++|| +|..++.+|..++. .++|+++|.+ +.+++.+++|++ ++.++ ++++++|+.+++. .....||
T Consensus 51 ~~g~~VLDlfaG-tG~~sl~aa~~~~g-a~~V~avDi~-~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD 127 (392)
T 3axs_A 51 GRPVKVADPLSA-SGIRAIRFLLETSC-VEKAYANDIS-SKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFD 127 (392)
T ss_dssp CSCEEEEESSCT-TSHHHHHHHHHCSC-EEEEEEECSC-HHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEE
T ss_pred CCCCEEEECCCc-ccHHHHHHHHhCCC-CCEEEEEECC-HHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCc
Confidence 346899999996 99999999886431 2789999999 999999999998 77666 9999999999987 6556899
Q ss_pred EEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEE
Q 042616 115 FVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 115 ~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
+||+|+ . ....++++.+.+. |++ ||+|++
T Consensus 128 ~V~lDP-~--g~~~~~l~~a~~~--Lk~-gGll~~ 156 (392)
T 3axs_A 128 YVDLDP-F--GTPVPFIESVALS--MKR-GGILSL 156 (392)
T ss_dssp EEEECC-S--SCCHHHHHHHHHH--EEE-EEEEEE
T ss_pred EEEECC-C--cCHHHHHHHHHHH--hCC-CCEEEE
Confidence 999999 3 4556789999888 775 888776
No 111
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.22 E-value=3.2e-11 Score=103.57 Aligned_cols=119 Identities=16% Similarity=0.152 Sum_probs=91.1
Q ss_pred hhHHHHHH-HHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhh
Q 042616 26 PDVGEFIS-ALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQK 104 (220)
Q Consensus 26 p~~~~~L~-~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~ 104 (220)
+...+++. .+....++.+||||||| +|..++.|+...+. +.+|+++|++ +.+++.|++++.....+++++++|+.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~vLDiGcG-~G~~~~~l~~~~~~-~~~v~gvD~s-~~~~~~a~~~~~~~~~~v~~~~~d~~~ 83 (284)
T 3gu3_A 7 DDYVSFLVNTVWKITKPVHIVDYGCG-YGYLGLVLMPLLPE-GSKYTGIDSG-ETLLAEARELFRLLPYDSEFLEGDATE 83 (284)
T ss_dssp HHHHHHHHHTTSCCCSCCEEEEETCT-TTHHHHHHTTTSCT-TCEEEEEESC-HHHHHHHHHHHHSSSSEEEEEESCTTT
T ss_pred hHHHHHHHHHHhccCCCCeEEEecCC-CCHHHHHHHHhCCC-CCEEEEEECC-HHHHHHHHHHHHhcCCceEEEEcchhh
Confidence 34433333 33345678999999997 99999999987664 6899999999 999999999987433489999999987
Q ss_pred hhhhcCCCccEEEEcCCC-CCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 105 LLMGDYRGADFVLIDCNI-DIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 105 ~L~~~~~~~D~VfiD~~k-~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
. +. .++||+|+...-. ...+....++.+.+. |+| ||.+++-+.
T Consensus 84 ~-~~-~~~fD~v~~~~~l~~~~~~~~~l~~~~~~--Lkp-gG~l~~~~~ 127 (284)
T 3gu3_A 84 I-EL-NDKYDIAICHAFLLHMTTPETMLQKMIHS--VKK-GGKIICFEP 127 (284)
T ss_dssp C-CC-SSCEEEEEEESCGGGCSSHHHHHHHHHHT--EEE-EEEEEEEEC
T ss_pred c-Cc-CCCeeEEEECChhhcCCCHHHHHHHHHHH--cCC-CCEEEEEec
Confidence 4 33 4689999987653 114668899999998 887 777775443
No 112
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.22 E-value=9.4e-11 Score=100.18 Aligned_cols=117 Identities=8% Similarity=-0.042 Sum_probs=87.5
Q ss_pred CCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc-------------
Q 042616 23 GKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG------------- 89 (220)
Q Consensus 23 ~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~------------- 89 (220)
...|...+++..+....+..+|||+||| +|..+.+||.. |.+|++||.+ +.+++.|++..+
T Consensus 51 ~~~~~l~~~~~~~~~~~~~~~vLD~GCG-~G~~~~~La~~----G~~V~gvD~S-~~~i~~a~~~~~~~~~~~~~~~~~~ 124 (252)
T 2gb4_A 51 QGHQLLKKHLDTFLKGQSGLRVFFPLCG-KAIEMKWFADR----GHTVVGVEIS-EIGIREFFAEQNLSYTEEPLAEIAG 124 (252)
T ss_dssp TCCHHHHHHHHHHHTTCCSCEEEETTCT-TCTHHHHHHHT----TCEEEEECSC-HHHHHHHHHHTTCCEEEEECTTSTT
T ss_pred CCCHHHHHHHHHhccCCCCCeEEEeCCC-CcHHHHHHHHC----CCeEEEEECC-HHHHHHHHHhccccccccccccccc
Confidence 4556667777666554577899999997 99999999974 6799999999 999999987653
Q ss_pred -----ccCCcEEEEEcchhhhhhhcCCCccEEEEcCCC---CCccHHHHHHHHHhhcCCCCCCEEEE
Q 042616 90 -----RYANCIEFVKGDAQKLLMGDYRGADFVLIDCNI---DIDGHKNVFRAAKESVMHGSGAGVIV 148 (220)
Q Consensus 90 -----g~~~~Ve~v~gda~~~L~~~~~~~D~VfiD~~k---~~~~y~~~l~~l~~~~~L~~~Ggviv 148 (220)
....+|+++++|+.+.-+...++||+|+.-+.- ....-..+++.+.+. |+| ||.++
T Consensus 125 ~~~~~~~~~~i~~~~~D~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~--Lkp-GG~l~ 188 (252)
T 2gb4_A 125 AKVFKSSSGSISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSL--LRK-EFQYL 188 (252)
T ss_dssp CEEEEETTSSEEEEESCTTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHT--EEE-EEEEE
T ss_pred ccccccCCCceEEEECccccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHH--cCC-CeEEE
Confidence 012579999999988543323789999843321 113446789999998 886 88764
No 113
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.22 E-value=7.5e-11 Score=100.24 Aligned_cols=114 Identities=8% Similarity=-0.050 Sum_probs=87.0
Q ss_pred HHHHHHHhhCC-CCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhh
Q 042616 30 EFISALAAGNN-AQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLL 106 (220)
Q Consensus 30 ~~L~~La~~~~-a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L 106 (220)
.-|.+++..-+ ..+|+||||| +|+.++.||...+ .++|+++|.+ +..++.|++|++ ++.++|++++||+.+.+
T Consensus 10 ~RL~~i~~~v~~g~~VlDIGtG-sG~l~i~la~~~~--~~~V~AvDi~-~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~ 85 (230)
T 3lec_A 10 KRLQKVANYVPKGARLLDVGSD-HAYLPIFLLQMGY--CDFAIAGEVV-NGPYQSALKNVSEHGLTSKIDVRLANGLSAF 85 (230)
T ss_dssp HHHHHHHTTSCTTEEEEEETCS-TTHHHHHHHHTTC--EEEEEEEESS-HHHHHHHHHHHHHTTCTTTEEEEECSGGGGC
T ss_pred HHHHHHHHhCCCCCEEEEECCc-hHHHHHHHHHhCC--CCEEEEEECC-HHHHHHHHHHHHHcCCCCcEEEEECchhhcc
Confidence 34556666544 5689999997 9999999997532 5799999999 999999999997 78788999999999877
Q ss_pred hhcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEec
Q 042616 107 MGDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYN 151 (220)
Q Consensus 107 ~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dN 151 (220)
+. .++||.|++-+-- .....+.++..... |.+.|-+|+.-|
T Consensus 86 ~~-~~~~D~IviaGmG-g~lI~~IL~~~~~~--l~~~~~lIlqp~ 126 (230)
T 3lec_A 86 EE-ADNIDTITICGMG-GRLIADILNNDIDK--LQHVKTLVLQPN 126 (230)
T ss_dssp CG-GGCCCEEEEEEEC-HHHHHHHHHHTGGG--GTTCCEEEEEES
T ss_pred cc-ccccCEEEEeCCc-hHHHHHHHHHHHHH--hCcCCEEEEECC
Confidence 43 2379999986543 13457778888777 766444455554
No 114
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.21 E-value=1.1e-10 Score=102.16 Aligned_cols=114 Identities=10% Similarity=0.038 Sum_probs=86.3
Q ss_pred HHHHHHHh--hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc----c-cCCcEEEEEcch
Q 042616 30 EFISALAA--GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG----R-YANCIEFVKGDA 102 (220)
Q Consensus 30 ~~L~~La~--~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~----g-~~~~Ve~v~gda 102 (220)
++|..++. ..++++||||||| .|..+..+++.. ...+|++||+| +..++.|++++. + ...+++++++|+
T Consensus 83 e~l~~~~l~~~~~~~~VLdiG~G-~G~~~~~l~~~~--~~~~v~~vDid-~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~ 158 (304)
T 3bwc_A 83 EVLGHTSLCSHPKPERVLIIGGG-DGGVLREVLRHG--TVEHCDLVDID-GEVMEQSKQHFPQISRSLADPRATVRVGDG 158 (304)
T ss_dssp HHHHHHHHTTSSSCCEEEEEECT-TSHHHHHHHTCT--TCCEEEEEESC-HHHHHHHHHHCHHHHGGGGCTTEEEEESCH
T ss_pred HHHhhhhhhcCCCCCeEEEEcCC-CCHHHHHHHhCC--CCCEEEEEECC-HHHHHHHHHHhHHhhcccCCCcEEEEECcH
Confidence 44544432 3568999999996 899999888642 25799999999 999999999883 2 246799999999
Q ss_pred hhhhhh-cCCCccEEEEcCCCCC----ccH-HHHHHHHHhhcCCCCCCEEEEEe
Q 042616 103 QKLLMG-DYRGADFVLIDCNIDI----DGH-KNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 103 ~~~L~~-~~~~~D~VfiD~~k~~----~~y-~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
.+.+.. ..++||+|++|..... ..| .++++.+.+. |+| ||++++.
T Consensus 159 ~~~~~~~~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~--Lkp-gG~lv~~ 209 (304)
T 3bwc_A 159 LAFVRQTPDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRI--LKP-DGICCNQ 209 (304)
T ss_dssp HHHHHSSCTTCEEEEEEECC---------CCHHHHHHHHHH--EEE-EEEEEEE
T ss_pred HHHHHhccCCceeEEEECCCCccccchhhhHHHHHHHHHHh--cCC-CcEEEEe
Confidence 998754 2578999999986411 111 5889999998 886 8888775
No 115
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.21 E-value=8.5e-11 Score=99.87 Aligned_cols=104 Identities=10% Similarity=-0.040 Sum_probs=77.5
Q ss_pred hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhh--hcCCCccE
Q 042616 38 GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLM--GDYRGADF 115 (220)
Q Consensus 38 ~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~--~~~~~~D~ 115 (220)
..+..+|||+||| +|+.|..||..+.+ .|+|+++|.+ +.+++...+..+.. .+|+++++|+..... .+.++||+
T Consensus 74 l~~g~~VLDlG~G-tG~~t~~la~~v~~-~G~V~avD~s-~~~l~~l~~~a~~r-~nv~~i~~Da~~~~~~~~~~~~~D~ 149 (232)
T 3id6_C 74 IRKGTKVLYLGAA-SGTTISHVSDIIEL-NGKAYGVEFS-PRVVRELLLVAQRR-PNIFPLLADARFPQSYKSVVENVDV 149 (232)
T ss_dssp CCTTCEEEEETCT-TSHHHHHHHHHHTT-TSEEEEEECC-HHHHHHHHHHHHHC-TTEEEEECCTTCGGGTTTTCCCEEE
T ss_pred CCCCCEEEEEeec-CCHHHHHHHHHhCC-CCEEEEEECc-HHHHHHHHHHhhhc-CCeEEEEcccccchhhhccccceEE
Confidence 4567999999996 99999999998776 7999999999 88765444333322 579999999976321 22468999
Q ss_pred EEEcCCCCCccHHHHHH-HHHhhcCCCCCCEEEEEe
Q 042616 116 VLIDCNIDIDGHKNVFR-AAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 116 VfiD~~k~~~~y~~~l~-~l~~~~~L~~~Ggviv~d 150 (220)
||+|... .+-.+.+. .+.+. |+| ||.+++-
T Consensus 150 I~~d~a~--~~~~~il~~~~~~~--Lkp-GG~lvis 180 (232)
T 3id6_C 150 LYVDIAQ--PDQTDIAIYNAKFF--LKV-NGDMLLV 180 (232)
T ss_dssp EEECCCC--TTHHHHHHHHHHHH--EEE-EEEEEEE
T ss_pred EEecCCC--hhHHHHHHHHHHHh--CCC-CeEEEEE
Confidence 9999987 66666554 44446 776 8887753
No 116
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.21 E-value=2.1e-11 Score=105.05 Aligned_cols=95 Identities=8% Similarity=0.011 Sum_probs=79.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc----cc-CCcEEEEEcchhhhhhhcCCCc
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG----RY-ANCIEFVKGDAQKLLMGDYRGA 113 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~----g~-~~~Ve~v~gda~~~L~~~~~~~ 113 (220)
.++++||||||| +|+++..+++. . ++|++||+| +++++.|++++. ++ ..+++++.+|+.+++ ++|
T Consensus 71 ~~~~~VL~iG~G-~G~~~~~ll~~---~-~~v~~veid-~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~----~~f 140 (262)
T 2cmg_A 71 KELKEVLIVDGF-DLELAHQLFKY---D-THIDFVQAD-EKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI----KKY 140 (262)
T ss_dssp SCCCEEEEESSC-CHHHHHHHTTS---S-CEEEEECSC-HHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC----CCE
T ss_pred CCCCEEEEEeCC-cCHHHHHHHhC---C-CEEEEEECC-HHHHHHHHHHHHhhccccCCCeEEEEechHHHHH----hhC
Confidence 467999999986 89998887764 2 799999999 999999999884 23 357999999998865 689
Q ss_pred cEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 114 DFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 114 D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
|+|++|... . ..+++.+.+. |+| ||++++.
T Consensus 141 D~Ii~d~~d--p--~~~~~~~~~~--L~p-gG~lv~~ 170 (262)
T 2cmg_A 141 DLIFCLQEP--D--IHRIDGLKRM--LKE-DGVFISV 170 (262)
T ss_dssp EEEEESSCC--C--HHHHHHHHTT--EEE-EEEEEEE
T ss_pred CEEEECCCC--h--HHHHHHHHHh--cCC-CcEEEEE
Confidence 999999765 3 2488999998 886 9998885
No 117
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.20 E-value=6.2e-11 Score=103.08 Aligned_cols=105 Identities=10% Similarity=-0.007 Sum_probs=84.1
Q ss_pred hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhcCCCccE
Q 042616 38 GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGDYRGADF 115 (220)
Q Consensus 38 ~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~~~~~D~ 115 (220)
..+..+||||||| +|..++.|+... +.+|++||.+ +++++.|+++++ ++.++++++++|+.+. +...+.||+
T Consensus 115 ~~~~~~vLDiGcG-~G~~~~~la~~~---~~~v~gvD~s-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~ 188 (312)
T 3vc1_A 115 AGPDDTLVDAGCG-RGGSMVMAHRRF---GSRVEGVTLS-AAQADFGNRRARELRIDDHVRSRVCNMLDT-PFDKGAVTA 188 (312)
T ss_dssp CCTTCEEEEESCT-TSHHHHHHHHHH---CCEEEEEESC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSC-CCCTTCEEE
T ss_pred CCCCCEEEEecCC-CCHHHHHHHHHc---CCEEEEEeCC-HHHHHHHHHHHHHcCCCCceEEEECChhcC-CCCCCCEeE
Confidence 4457899999997 999999999864 5799999999 999999999987 6767899999999873 322478999
Q ss_pred EEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEec
Q 042616 116 VLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYN 151 (220)
Q Consensus 116 VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dN 151 (220)
|+...-...-+...+++.+.+. |+| ||.+++-.
T Consensus 189 V~~~~~l~~~~~~~~l~~~~~~--Lkp-gG~l~~~~ 221 (312)
T 3vc1_A 189 SWNNESTMYVDLHDLFSEHSRF--LKV-GGRYVTIT 221 (312)
T ss_dssp EEEESCGGGSCHHHHHHHHHHH--EEE-EEEEEEEE
T ss_pred EEECCchhhCCHHHHHHHHHHH--cCC-CcEEEEEE
Confidence 9976543223478899999999 887 77766543
No 118
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.20 E-value=1.3e-10 Score=93.10 Aligned_cols=105 Identities=12% Similarity=-0.008 Sum_probs=83.2
Q ss_pred HHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhcC
Q 042616 33 SALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGDY 110 (220)
Q Consensus 33 ~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~~ 110 (220)
..++...++.+|||+||| +|..+..|+.. +.+++++|.+ +.+++.|++++. ++ .+++++++|+.+.. . .
T Consensus 25 ~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~----~~~v~~vD~s-~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~-~-~ 95 (199)
T 2xvm_A 25 LEAVKVVKPGKTLDLGCG-NGRNSLYLAAN----GYDVDAWDKN-AMSIANVERIKSIENL-DNLHTRVVDLNNLT-F-D 95 (199)
T ss_dssp HHHTTTSCSCEEEEETCT-TSHHHHHHHHT----TCEEEEEESC-HHHHHHHHHHHHHHTC-TTEEEEECCGGGCC-C-C
T ss_pred HHHhhccCCCeEEEEcCC-CCHHHHHHHHC----CCeEEEEECC-HHHHHHHHHHHHhCCC-CCcEEEEcchhhCC-C-C
Confidence 334455678899999997 99999999874 5799999999 999999999986 55 46999999998743 3 5
Q ss_pred CCccEEEEcCCCC---CccHHHHHHHHHhhcCCCCCCEEEEE
Q 042616 111 RGADFVLIDCNID---IDGHKNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 111 ~~~D~VfiD~~k~---~~~y~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
++||+|+...... ..+...+++.+.+. |+| ||.+++
T Consensus 96 ~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~--L~~-gG~l~~ 134 (199)
T 2xvm_A 96 RQYDFILSTVVLMFLEAKTIPGLIANMQRC--TKP-GGYNLI 134 (199)
T ss_dssp CCEEEEEEESCGGGSCGGGHHHHHHHHHHT--EEE-EEEEEE
T ss_pred CCceEEEEcchhhhCCHHHHHHHHHHHHHh--cCC-CeEEEE
Confidence 7899999875431 13678889999998 886 777544
No 119
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.20 E-value=4.9e-11 Score=98.96 Aligned_cols=115 Identities=15% Similarity=0.061 Sum_probs=85.5
Q ss_pred ChhHH-HHHHHHH-hhCCCCEEEEEcCCchHHHHHHHHHHcCC----CCcEEEEEeCCchhHHHHHHHHhc--cc----C
Q 042616 25 EPDVG-EFISALA-AGNNAQLIVMACSSIAVSRTLALVAAARQ----TGGRVVCILSGVIGDIDASKKSLG--RY----A 92 (220)
Q Consensus 25 ~p~~~-~~L~~La-~~~~a~~ILEIGtg~~G~sTl~LA~A~~~----~~grV~tIE~d~~~~~~~Ar~~l~--g~----~ 92 (220)
.|... .++..+. ...+..+||||||| +|+.+..|+..... ..++|+++|.+ +++++.|++++. ++ .
T Consensus 67 ~p~~~~~~~~~l~~~~~~~~~VLdiG~G-~G~~~~~la~~~~~~~~~~~~~v~~vD~~-~~~~~~a~~~~~~~~~~~~~~ 144 (227)
T 1r18_A 67 APHMHAFALEYLRDHLKPGARILDVGSG-SGYLTACFYRYIKAKGVDADTRIVGIEHQ-AELVRRSKANLNTDDRSMLDS 144 (227)
T ss_dssp CHHHHHHHHHHTTTTCCTTCEEEEESCT-TSHHHHHHHHHHHHSCCCTTCEEEEEESC-HHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHhhCCCCCEEEEECCC-ccHHHHHHHHhcccccCCccCEEEEEEcC-HHHHHHHHHHHHhcCccccCC
Confidence 55543 4444443 34566899999997 89999999986531 02699999999 999999999986 41 2
Q ss_pred CcEEEEEcchhhhhhhcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 93 NCIEFVKGDAQKLLMGDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 93 ~~Ve~v~gda~~~L~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
++++++++|+.+.++. .++||+|++++.. ... .+.+.+. |+| ||.+++.
T Consensus 145 ~~v~~~~~d~~~~~~~-~~~fD~I~~~~~~--~~~---~~~~~~~--Lkp-gG~lvi~ 193 (227)
T 1r18_A 145 GQLLIVEGDGRKGYPP-NAPYNAIHVGAAA--PDT---PTELINQ--LAS-GGRLIVP 193 (227)
T ss_dssp TSEEEEESCGGGCCGG-GCSEEEEEECSCB--SSC---CHHHHHT--EEE-EEEEEEE
T ss_pred CceEEEECCcccCCCc-CCCccEEEECCch--HHH---HHHHHHH--hcC-CCEEEEE
Confidence 6899999999885543 3689999999887 443 3566676 766 8877764
No 120
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.20 E-value=9.4e-11 Score=97.26 Aligned_cols=101 Identities=12% Similarity=-0.005 Sum_probs=77.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhh---hhhcCCCccE
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKL---LMGDYRGADF 115 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~---L~~~~~~~D~ 115 (220)
.+..+|||+||| +|+.+..|+...+ .++|++||.+ +.+++.+.+..+.. .+++++++|+.+. .+ ..++||+
T Consensus 56 ~~g~~VLDlGcG-tG~~~~~la~~~~--~~~V~gvD~s-~~~l~~~~~~a~~~-~~v~~~~~d~~~~~~~~~-~~~~fD~ 129 (210)
T 1nt2_A 56 RGDERVLYLGAA-SGTTVSHLADIVD--EGIIYAVEYS-AKPFEKLLELVRER-NNIIPLLFDASKPWKYSG-IVEKVDL 129 (210)
T ss_dssp CSSCEEEEETCT-TSHHHHHHHHHTT--TSEEEEECCC-HHHHHHHHHHHHHC-SSEEEECSCTTCGGGTTT-TCCCEEE
T ss_pred CCCCEEEEECCc-CCHHHHHHHHHcC--CCEEEEEECC-HHHHHHHHHHHhcC-CCeEEEEcCCCCchhhcc-cccceeE
Confidence 456799999997 9999999998765 5899999999 98776665554433 5799999998764 22 2478999
Q ss_pred EEEcCCCCCcc-HHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 116 VLIDCNIDIDG-HKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 116 VfiD~~k~~~~-y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
|+.|... .. ....++.+.+. |+| ||.+++.
T Consensus 130 V~~~~~~--~~~~~~~l~~~~r~--Lkp-gG~l~i~ 160 (210)
T 1nt2_A 130 IYQDIAQ--KNQIEILKANAEFF--LKE-KGEVVIM 160 (210)
T ss_dssp EEECCCS--TTHHHHHHHHHHHH--EEE-EEEEEEE
T ss_pred EEEeccC--hhHHHHHHHHHHHH--hCC-CCEEEEE
Confidence 9999755 33 33458888888 887 8877764
No 121
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.20 E-value=1.6e-10 Score=97.63 Aligned_cols=116 Identities=14% Similarity=0.097 Sum_probs=89.3
Q ss_pred HHHHHHHHhh---CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchh
Q 042616 29 GEFISALAAG---NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQ 103 (220)
Q Consensus 29 ~~~L~~La~~---~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~ 103 (220)
.+++..++.. .+..+||||||| +|..+..|+... +.+|+++|.+ +.+++.|++++. ++.++++++++|+.
T Consensus 47 ~~~~~~l~~~~~~~~~~~vLDiGcG-~G~~~~~l~~~~---~~~v~gvD~s-~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 121 (273)
T 3bus_A 47 DRLTDEMIALLDVRSGDRVLDVGCG-IGKPAVRLATAR---DVRVTGISIS-RPQVNQANARATAAGLANRVTFSYADAM 121 (273)
T ss_dssp HHHHHHHHHHSCCCTTCEEEEESCT-TSHHHHHHHHHS---CCEEEEEESC-HHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCC-CCHHHHHHHHhc---CCEEEEEeCC-HHHHHHHHHHHHhcCCCcceEEEECccc
Confidence 3444444443 467899999997 999999998763 5799999999 999999999986 66678999999998
Q ss_pred hhhhhcCCCccEEEEcCCC-CCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 104 KLLMGDYRGADFVLIDCNI-DIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 104 ~~L~~~~~~~D~VfiD~~k-~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
+ +|...++||+|+.-... .-.+...+++.+.+. |+| ||.+++.+..
T Consensus 122 ~-~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~--L~p-gG~l~i~~~~ 168 (273)
T 3bus_A 122 D-LPFEDASFDAVWALESLHHMPDRGRALREMARV--LRP-GGTVAIADFV 168 (273)
T ss_dssp S-CCSCTTCEEEEEEESCTTTSSCHHHHHHHHHTT--EEE-EEEEEEEEEE
T ss_pred c-CCCCCCCccEEEEechhhhCCCHHHHHHHHHHH--cCC-CeEEEEEEee
Confidence 7 33324689999965533 124678899999998 886 8877766544
No 122
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.20 E-value=1.5e-10 Score=96.74 Aligned_cols=112 Identities=10% Similarity=0.038 Sum_probs=87.4
Q ss_pred HHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhh
Q 042616 28 VGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKL 105 (220)
Q Consensus 28 ~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~ 105 (220)
....+..+....+..+|||+||| +|..+..|+.. +.+|+++|++ +.+++.|++++. ++ .+++++++|+.+
T Consensus 9 ~~~~~~~~~~~~~~~~vLDiGcG-~G~~~~~l~~~----~~~v~~vD~s-~~~~~~a~~~~~~~~~-~~v~~~~~d~~~- 80 (239)
T 1xxl_A 9 SLGLMIKTAECRAEHRVLDIGAG-AGHTALAFSPY----VQECIGVDAT-KEMVEVASSFAQEKGV-ENVRFQQGTAES- 80 (239)
T ss_dssp HHHHHHHHHTCCTTCEEEEESCT-TSHHHHHHGGG----SSEEEEEESC-HHHHHHHHHHHHHHTC-CSEEEEECBTTB-
T ss_pred CcchHHHHhCcCCCCEEEEEccC-cCHHHHHHHHh----CCEEEEEECC-HHHHHHHHHHHHHcCC-CCeEEEeccccc-
Confidence 34444555577888999999997 89999988864 4699999999 999999999986 55 579999999977
Q ss_pred hhhcCCCccEEEEcCCC-CCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 106 LMGDYRGADFVLIDCNI-DIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 106 L~~~~~~~D~VfiD~~k-~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
++...++||+|+..... .-.+....++.+.+. |+| ||.+++-
T Consensus 81 ~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~--Lkp-gG~l~~~ 123 (239)
T 1xxl_A 81 LPFPDDSFDIITCRYAAHHFSDVRKAVREVARV--LKQ-DGRFLLV 123 (239)
T ss_dssp CCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHH--EEE-EEEEEEE
T ss_pred CCCCCCcEEEEEECCchhhccCHHHHHHHHHHH--cCC-CcEEEEE
Confidence 44324789999987533 114668889999998 887 7776664
No 123
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.20 E-value=7.3e-11 Score=108.67 Aligned_cols=124 Identities=13% Similarity=0.073 Sum_probs=96.1
Q ss_pred CCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEc
Q 042616 23 GKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKG 100 (220)
Q Consensus 23 ~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~g 100 (220)
.+....++++..++...+..+|||+||| +|..|+.|+..++. .++|+++|.+ +.+++.++++++ ++ .+|+++++
T Consensus 242 ~~qd~~s~l~~~~l~~~~g~~VLDlgaG-~G~~t~~la~~~~~-~~~v~a~D~s-~~~l~~~~~~~~~~g~-~~v~~~~~ 317 (450)
T 2yxl_A 242 IVQEEASAVASIVLDPKPGETVVDLAAA-PGGKTTHLAELMKN-KGKIYAFDVD-KMRMKRLKDFVKRMGI-KIVKPLVK 317 (450)
T ss_dssp EECCHHHHHHHHHHCCCTTCEEEESSCT-TCHHHHHHHHHTTT-CSEEEEECSC-HHHHHHHHHHHHHTTC-CSEEEECS
T ss_pred EecCchhHHHHHhcCCCCcCEEEEeCCC-ccHHHHHHHHHcCC-CCEEEEEcCC-HHHHHHHHHHHHHcCC-CcEEEEEc
Confidence 3445566777777777888999999996 89999999988753 5899999999 999999999997 66 57999999
Q ss_pred chhhhhhhcC-CCccEEEEcCCCCCc-------c----------------HHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 101 DAQKLLMGDY-RGADFVLIDCNIDID-------G----------------HKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 101 da~~~L~~~~-~~~D~VfiD~~k~~~-------~----------------y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
|+.+..+.+. +.||+|++|++-... + ...+++.+.+. |+| ||.+|.-...
T Consensus 318 D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~--Lkp-GG~lvy~tcs 391 (450)
T 2yxl_A 318 DARKAPEIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARL--VKP-GGRLLYTTCS 391 (450)
T ss_dssp CTTCCSSSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTT--EEE-EEEEEEEESC
T ss_pred ChhhcchhhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHh--cCC-CcEEEEEeCC
Confidence 9988643333 679999999764111 0 14678888888 876 8887765444
No 124
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.19 E-value=1.5e-10 Score=98.97 Aligned_cols=108 Identities=12% Similarity=0.034 Sum_probs=83.9
Q ss_pred HHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc
Q 042616 30 EFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD 109 (220)
Q Consensus 30 ~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~ 109 (220)
+++..+ ...++.+|||+||| +|..++.|+.. +.+|+++|.+ +.+++.|++++....-+++++++|+.+...
T Consensus 111 ~~~~~~-~~~~~~~vLD~GcG-~G~~~~~l~~~----g~~v~~vD~s-~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-- 181 (286)
T 3m70_A 111 DVVDAA-KIISPCKVLDLGCG-QGRNSLYLSLL----GYDVTSWDHN-ENSIAFLNETKEKENLNISTALYDINAANI-- 181 (286)
T ss_dssp HHHHHH-HHSCSCEEEEESCT-TCHHHHHHHHT----TCEEEEEESC-HHHHHHHHHHHHHTTCCEEEEECCGGGCCC--
T ss_pred HHHHHh-hccCCCcEEEECCC-CCHHHHHHHHC----CCeEEEEECC-HHHHHHHHHHHHHcCCceEEEEeccccccc--
Confidence 444444 34478999999997 99999999875 6799999999 999999999987221289999999988543
Q ss_pred CCCccEEEEcCCC---CCccHHHHHHHHHhhcCCCCCCEEEEE
Q 042616 110 YRGADFVLIDCNI---DIDGHKNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 110 ~~~~D~VfiD~~k---~~~~y~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
.++||+|+....- +......+++.+.+. |+| ||++++
T Consensus 182 ~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~--Lkp-gG~l~i 221 (286)
T 3m70_A 182 QENYDFIVSTVVFMFLNRERVPSIIKNMKEH--TNV-GGYNLI 221 (286)
T ss_dssp CSCEEEEEECSSGGGSCGGGHHHHHHHHHHT--EEE-EEEEEE
T ss_pred cCCccEEEEccchhhCCHHHHHHHHHHHHHh--cCC-CcEEEE
Confidence 5789999987632 114567899999998 886 777443
No 125
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.19 E-value=1.6e-10 Score=98.36 Aligned_cols=113 Identities=12% Similarity=0.066 Sum_probs=88.9
Q ss_pred hhHHHHHHHHHhh-CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcch
Q 042616 26 PDVGEFISALAAG-NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDA 102 (220)
Q Consensus 26 p~~~~~L~~La~~-~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda 102 (220)
|.....+..+... .+.++|||+||| +|..++.++.. +.+|+++|.+ +.+++.|+++++ ++ + ++++++|+
T Consensus 105 ~tt~~~~~~l~~~~~~~~~VLDiGcG-~G~l~~~la~~----g~~v~gvDi~-~~~v~~a~~n~~~~~~-~-v~~~~~d~ 176 (254)
T 2nxc_A 105 ETTRLALKALARHLRPGDKVLDLGTG-SGVLAIAAEKL----GGKALGVDID-PMVLPQAEANAKRNGV-R-PRFLEGSL 176 (254)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEEETCT-TSHHHHHHHHT----TCEEEEEESC-GGGHHHHHHHHHHTTC-C-CEEEESCH
T ss_pred HHHHHHHHHHHHhcCCCCEEEEecCC-CcHHHHHHHHh----CCeEEEEECC-HHHHHHHHHHHHHcCC-c-EEEEECCh
Confidence 3344445555443 567899999997 89999987763 4499999999 999999999987 44 3 99999999
Q ss_pred hhhhhhcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 103 QKLLMGDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 103 ~~~L~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
.+.++. ++||+|+.+... ......++.+.+. |+| ||.++...+.
T Consensus 177 ~~~~~~--~~fD~Vv~n~~~--~~~~~~l~~~~~~--Lkp-gG~lils~~~ 220 (254)
T 2nxc_A 177 EAALPF--GPFDLLVANLYA--ELHAALAPRYREA--LVP-GGRALLTGIL 220 (254)
T ss_dssp HHHGGG--CCEEEEEEECCH--HHHHHHHHHHHHH--EEE-EEEEEEEEEE
T ss_pred hhcCcC--CCCCEEEECCcH--HHHHHHHHHHHHH--cCC-CCEEEEEeec
Confidence 886643 689999998766 6678889999998 876 8888775444
No 126
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.19 E-value=1e-10 Score=98.49 Aligned_cols=112 Identities=13% Similarity=0.104 Sum_probs=85.3
Q ss_pred hHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhh
Q 042616 27 DVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQK 104 (220)
Q Consensus 27 ~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~ 104 (220)
+...++ ..+...++.+||||||| +|..+..|+.. +++|+++|++ +.+++.|+++++ ++ .+++++++|+.+
T Consensus 25 ~~~~l~-~~l~~~~~~~vLDiGcG-~G~~~~~l~~~----~~~v~gvD~s-~~~l~~a~~~~~~~~~-~~v~~~~~d~~~ 96 (260)
T 1vl5_A 25 DLAKLM-QIAALKGNEEVLDVATG-GGHVANAFAPF----VKKVVAFDLT-EDILKVARAFIEGNGH-QQVEYVQGDAEQ 96 (260)
T ss_dssp CHHHHH-HHHTCCSCCEEEEETCT-TCHHHHHHGGG----SSEEEEEESC-HHHHHHHHHHHHHTTC-CSEEEEECCC-C
T ss_pred HHHHHH-HHhCCCCCCEEEEEeCC-CCHHHHHHHHh----CCEEEEEeCC-HHHHHHHHHHHHhcCC-CceEEEEecHHh
Confidence 333444 44466678999999997 99999988875 4599999999 999999999986 55 479999999987
Q ss_pred hhhhcCCCccEEEEcCCC-CCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 105 LLMGDYRGADFVLIDCNI-DIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 105 ~L~~~~~~~D~VfiD~~k-~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
+|...++||+|+..... .-.+....++.+.+. |+| ||.+++-
T Consensus 97 -l~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~--Lkp-gG~l~~~ 139 (260)
T 1vl5_A 97 -MPFTDERFHIVTCRIAAHHFPNPASFVSEAYRV--LKK-GGQLLLV 139 (260)
T ss_dssp -CCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHH--EEE-EEEEEEE
T ss_pred -CCCCCCCEEEEEEhhhhHhcCCHHHHHHHHHHH--cCC-CCEEEEE
Confidence 34324789999977433 114567899999999 887 7776663
No 127
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.19 E-value=1.4e-10 Score=105.00 Aligned_cols=102 Identities=16% Similarity=0.083 Sum_probs=84.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc-c---------------cCCcEEEEEcch
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG-R---------------YANCIEFVKGDA 102 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~-g---------------~~~~Ve~v~gda 102 (220)
.++.+|||+||| +|..++.+|...+ +.+|+++|.+ +++++.|++|++ . --++++++++|+
T Consensus 46 ~~~~~VLDl~aG-tG~~~l~~a~~~~--~~~V~avDi~-~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da 121 (378)
T 2dul_A 46 LNPKIVLDALSA-TGIRGIRFALETP--AEEVWLNDIS-EDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDA 121 (378)
T ss_dssp HCCSEEEESSCT-TSHHHHHHHHHSS--CSEEEEEESC-HHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCH
T ss_pred cCCCEEEECCCc-hhHHHHHHHHhCC--CCeEEEEECC-HHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcH
Confidence 478899999996 9999999998754 4689999999 999999999997 3 113499999999
Q ss_pred hhhhhhcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 103 QKLLMGDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 103 ~~~L~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
.+++......||+|++|+.. ...++++.+.+. |++ ||+|.+.
T Consensus 122 ~~~~~~~~~~fD~I~lDP~~---~~~~~l~~a~~~--lk~-gG~l~vt 163 (378)
T 2dul_A 122 NRLMAERHRYFHFIDLDPFG---SPMEFLDTALRS--AKR-RGILGVT 163 (378)
T ss_dssp HHHHHHSTTCEEEEEECCSS---CCHHHHHHHHHH--EEE-EEEEEEE
T ss_pred HHHHHhccCCCCEEEeCCCC---CHHHHHHHHHHh--cCC-CCEEEEE
Confidence 99886645689999999854 457888988888 775 8887664
No 128
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.19 E-value=2e-10 Score=95.94 Aligned_cols=112 Identities=17% Similarity=0.178 Sum_probs=85.9
Q ss_pred HHHHHHHHHhh---CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhh
Q 042616 28 VGEFISALAAG---NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQK 104 (220)
Q Consensus 28 ~~~~L~~La~~---~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~ 104 (220)
..+++..+... .++.+|||+||| +|..++.|+.. +.+|+++|++ +.+++.|++++.....+++++++|+.+
T Consensus 26 ~~~~~~~~~~~~~~~~~~~vLDlGcG-~G~~~~~l~~~----~~~v~gvD~s-~~~l~~a~~~~~~~~~~v~~~~~d~~~ 99 (252)
T 1wzn_A 26 EIDFVEEIFKEDAKREVRRVLDLACG-TGIPTLELAER----GYEVVGLDLH-EEMLRVARRKAKERNLKIEFLQGDVLE 99 (252)
T ss_dssp HHHHHHHHHHHTCSSCCCEEEEETCT-TCHHHHHHHHT----TCEEEEEESC-HHHHHHHHHHHHHTTCCCEEEESCGGG
T ss_pred HHHHHHHHHHHhcccCCCEEEEeCCC-CCHHHHHHHHC----CCeEEEEECC-HHHHHHHHHHHHhcCCceEEEECChhh
Confidence 45666666554 346899999997 99999998874 6799999999 999999999987322379999999988
Q ss_pred hhhhcCCCccEEEEcCCC----CCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 105 LLMGDYRGADFVLIDCNI----DIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 105 ~L~~~~~~~D~VfiD~~k----~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
.. ..++||+|++.... +..+....++.+.+. |+| ||+++++
T Consensus 100 ~~--~~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~--L~p-gG~li~~ 144 (252)
T 1wzn_A 100 IA--FKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEA--LKP-GGVFITD 144 (252)
T ss_dssp CC--CCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHH--EEE-EEEEEEE
T ss_pred cc--cCCCccEEEEcCCchhcCCHHHHHHHHHHHHHH--cCC-CeEEEEe
Confidence 43 24689999975322 112456788888888 876 8888876
No 129
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.18 E-value=1.5e-10 Score=100.56 Aligned_cols=113 Identities=5% Similarity=-0.033 Sum_probs=88.0
Q ss_pred HHHHHHHHhh---CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchh
Q 042616 29 GEFISALAAG---NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQ 103 (220)
Q Consensus 29 ~~~L~~La~~---~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~ 103 (220)
.+.+..++.. .+..+||||||| +|..++.|+... +.+|++||++ +++++.|++++. ++.++++++++|+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~vLDiGcG-~G~~~~~la~~~---~~~v~gvD~s-~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 150 (318)
T 2fk8_A 76 YAKVDLNLDKLDLKPGMTLLDIGCG-WGTTMRRAVERF---DVNVIGLTLS-KNQHARCEQVLASIDTNRSRQVLLQGWE 150 (318)
T ss_dssp HHHHHHHHTTSCCCTTCEEEEESCT-TSHHHHHHHHHH---CCEEEEEESC-HHHHHHHHHHHHTSCCSSCEEEEESCGG
T ss_pred HHHHHHHHHhcCCCCcCEEEEEccc-chHHHHHHHHHC---CCEEEEEECC-HHHHHHHHHHHHhcCCCCceEEEECChH
Confidence 3444455443 456799999997 899999999865 4699999999 999999999986 66678999999987
Q ss_pred hhhhhcCCCccEEEEcCCCC---CccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 104 KLLMGDYRGADFVLIDCNID---IDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 104 ~~L~~~~~~~D~VfiD~~k~---~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
++ + ++||+|+....-. ..++..+++.+.+. |+| ||.+++....
T Consensus 151 ~~-~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~--Lkp-gG~l~~~~~~ 196 (318)
T 2fk8_A 151 DF-A---EPVDRIVSIEAFEHFGHENYDDFFKRCFNI--MPA-DGRMTVQSSV 196 (318)
T ss_dssp GC-C---CCCSEEEEESCGGGTCGGGHHHHHHHHHHH--SCT-TCEEEEEEEE
T ss_pred HC-C---CCcCEEEEeChHHhcCHHHHHHHHHHHHHh--cCC-CcEEEEEEec
Confidence 64 3 6899999774220 14678899999999 887 7777765544
No 130
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.18 E-value=1.4e-10 Score=99.47 Aligned_cols=140 Identities=10% Similarity=0.030 Sum_probs=97.7
Q ss_pred HHHHHHhhCC-CCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhh
Q 042616 31 FISALAAGNN-AQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLM 107 (220)
Q Consensus 31 ~L~~La~~~~-a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~ 107 (220)
-|.+++..-+ ..+||||||| +|+.++.||...+ .++|+++|.+ +..++.|++|++ ++.++|+++.+|+.+.++
T Consensus 11 RL~~i~~~v~~g~~VlDIGtG-sG~l~i~la~~~~--~~~V~avDi~-~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~ 86 (244)
T 3gnl_A 11 RLEKVASYITKNERIADIGSD-HAYLPCFAVKNQT--ASFAIAGEVV-DGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIE 86 (244)
T ss_dssp HHHHHHTTCCSSEEEEEETCS-TTHHHHHHHHTTS--EEEEEEEESS-HHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC
T ss_pred HHHHHHHhCCCCCEEEEECCc-cHHHHHHHHHhCC--CCEEEEEECC-HHHHHHHHHHHHHcCCCceEEEEecchhhccC
Confidence 3555555544 4689999997 9999999998532 5799999999 999999999997 787889999999998774
Q ss_pred hcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCCCCC--Ccc---ceE----EEeeecCCcEEEEEEe
Q 042616 108 GDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNALPKG--SWR---GYK----THFLPIGEGLLVTRIG 178 (220)
Q Consensus 108 ~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~~~g--~~~---~~~----s~~lPig~Gl~v~~~~ 178 (220)
. ..+||.|++-+-- .....+.++..... |.+.+-+|+.-|.-... .|. +|. ..+..-+.+.+|....
T Consensus 87 ~-~~~~D~IviagmG-g~lI~~IL~~~~~~--L~~~~~lIlq~~~~~~~lr~~L~~~Gf~i~~E~lv~e~~k~Yeii~~~ 162 (244)
T 3gnl_A 87 K-KDAIDTIVIAGMG-GTLIRTILEEGAAK--LAGVTKLILQPNIAAWQLREWSEQNNWLITSEAILREDNKVYEIMVLA 162 (244)
T ss_dssp G-GGCCCEEEEEEEC-HHHHHHHHHHTGGG--GTTCCEEEEEESSCHHHHHHHHHHHTEEEEEEEEEEETTEEEEEEEEE
T ss_pred c-cccccEEEEeCCc-hHHHHHHHHHHHHH--hCCCCEEEEEcCCChHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEE
Confidence 3 2359999874433 13467788888887 76644455555421111 344 443 3445566666665544
No 131
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.18 E-value=9e-11 Score=99.54 Aligned_cols=113 Identities=9% Similarity=0.130 Sum_probs=87.1
Q ss_pred HHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhh
Q 042616 29 GEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLL 106 (220)
Q Consensus 29 ~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L 106 (220)
.+++.......+..+||||||| +|..+..|+...+ +++|+++|++ +.+++.|++++. ++ .+++++.+|+.+..
T Consensus 26 ~~~l~~~~~~~~~~~vLDiG~G-~G~~~~~l~~~~~--~~~v~~vD~s-~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~ 100 (276)
T 3mgg_A 26 EKLLHHDTVYPPGAKVLEAGCG-IGAQTVILAKNNP--DAEITSIDIS-PESLEKARENTEKNGI-KNVKFLQANIFSLP 100 (276)
T ss_dssp HHHHHTTCCCCTTCEEEETTCT-TSHHHHHHHHHCT--TSEEEEEESC-HHHHHHHHHHHHHTTC-CSEEEEECCGGGCC
T ss_pred HHHHhhcccCCCCCeEEEecCC-CCHHHHHHHHhCC--CCEEEEEECC-HHHHHHHHHHHHHcCC-CCcEEEEcccccCC
Confidence 3333333334567899999997 9999999998743 6899999999 999999999987 55 57999999998743
Q ss_pred hhcCCCccEEEEcCCC-CCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 107 MGDYRGADFVLIDCNI-DIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 107 ~~~~~~~D~VfiD~~k-~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
...++||+|+..... .-.+....++.+.+. |+| ||++++-
T Consensus 101 -~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~--L~p-gG~l~~~ 141 (276)
T 3mgg_A 101 -FEDSSFDHIFVCFVLEHLQSPEEALKSLKKV--LKP-GGTITVI 141 (276)
T ss_dssp -SCTTCEEEEEEESCGGGCSCHHHHHHHHHHH--EEE-EEEEEEE
T ss_pred -CCCCCeeEEEEechhhhcCCHHHHHHHHHHH--cCC-CcEEEEE
Confidence 325789999987533 114567889999998 887 7777664
No 132
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.18 E-value=1.1e-10 Score=95.50 Aligned_cols=114 Identities=10% Similarity=0.068 Sum_probs=88.6
Q ss_pred HHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhh
Q 042616 29 GEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLL 106 (220)
Q Consensus 29 ~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L 106 (220)
.+++. .....+..+|||+||| +|..+..|+....+ .++|+++|.+ +.+++.|++++. ++ .+++++++|+.+.
T Consensus 27 ~~~~~-~~~~~~~~~vLDiG~G-~G~~~~~l~~~~~~-~~~v~~vD~s-~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~- 100 (219)
T 3dh0_A 27 EKVLK-EFGLKEGMTVLDVGTG-AGFYLPYLSKMVGE-KGKVYAIDVQ-EEMVNYAWEKVNKLGL-KNVEVLKSEENKI- 100 (219)
T ss_dssp HHHHH-HHTCCTTCEEEESSCT-TCTTHHHHHHHHTT-TCEEEEEESC-HHHHHHHHHHHHHHTC-TTEEEEECBTTBC-
T ss_pred HHHHH-HhCCCCCCEEEEEecC-CCHHHHHHHHHhCC-CcEEEEEECC-HHHHHHHHHHHHHcCC-CcEEEEecccccC-
Confidence 34444 3456677899999997 99999999988644 6799999999 999999999986 55 4799999999774
Q ss_pred hhcCCCccEEEEcCCCC-CccHHHHHHHHHhhcCCCCCCEEEEEec
Q 042616 107 MGDYRGADFVLIDCNID-IDGHKNVFRAAKESVMHGSGAGVIVGYN 151 (220)
Q Consensus 107 ~~~~~~~D~VfiD~~k~-~~~y~~~l~~l~~~~~L~~~Ggviv~dN 151 (220)
+...++||+|+...... -.+...+++.+.+. |+| ||.+++-+
T Consensus 101 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~--Lkp-gG~l~i~~ 143 (219)
T 3dh0_A 101 PLPDNTVDFIFMAFTFHELSEPLKFLEELKRV--AKP-FAYLAIID 143 (219)
T ss_dssp SSCSSCEEEEEEESCGGGCSSHHHHHHHHHHH--EEE-EEEEEEEE
T ss_pred CCCCCCeeEEEeehhhhhcCCHHHHHHHHHHH--hCC-CeEEEEEE
Confidence 22246899999876541 13567889999998 887 77766644
No 133
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.18 E-value=1.8e-10 Score=98.75 Aligned_cols=108 Identities=12% Similarity=0.053 Sum_probs=86.1
Q ss_pred hhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhcCCCcc
Q 042616 37 AGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGDYRGAD 114 (220)
Q Consensus 37 ~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~~~~~D 114 (220)
...++.+||||||| +|..+..|+... +.+|++||++ +.+++.|++++. ++.++++++++|+.+ +|...++||
T Consensus 79 ~~~~~~~vLDiGcG-~G~~~~~l~~~~---~~~v~gvD~s-~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~fD 152 (297)
T 2o57_A 79 VLQRQAKGLDLGAG-YGGAARFLVRKF---GVSIDCLNIA-PVQNKRNEEYNNQAGLADNITVKYGSFLE-IPCEDNSYD 152 (297)
T ss_dssp CCCTTCEEEEETCT-TSHHHHHHHHHH---CCEEEEEESC-HHHHHHHHHHHHHHTCTTTEEEEECCTTS-CSSCTTCEE
T ss_pred CCCCCCEEEEeCCC-CCHHHHHHHHHh---CCEEEEEeCC-HHHHHHHHHHHHhcCCCcceEEEEcCccc-CCCCCCCEe
Confidence 44567899999997 999999999864 4699999999 999999999986 776789999999987 343246899
Q ss_pred EEEEcCCC-CCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 115 FVLIDCNI-DIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 115 ~VfiD~~k-~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
+|+..... .-.+...+++.+.+. |+| ||.+++....
T Consensus 153 ~v~~~~~l~~~~~~~~~l~~~~~~--Lkp-gG~l~~~~~~ 189 (297)
T 2o57_A 153 FIWSQDAFLHSPDKLKVFQECARV--LKP-RGVMAITDPM 189 (297)
T ss_dssp EEEEESCGGGCSCHHHHHHHHHHH--EEE-EEEEEEEEEE
T ss_pred EEEecchhhhcCCHHHHHHHHHHH--cCC-CeEEEEEEec
Confidence 99976432 114568899999999 887 7777765443
No 134
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.17 E-value=2.5e-10 Score=97.45 Aligned_cols=112 Identities=8% Similarity=-0.009 Sum_probs=86.9
Q ss_pred HHHHHHHhh---CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhh
Q 042616 30 EFISALAAG---NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQK 104 (220)
Q Consensus 30 ~~L~~La~~---~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~ 104 (220)
+++..++.. .+..+||||||| +|..+..|+... +.+|++||++ ++.++.|++++. ++.++++++++|+.+
T Consensus 51 ~~~~~~~~~~~~~~~~~vLDiGcG-~G~~~~~l~~~~---~~~v~gvd~s-~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 125 (287)
T 1kpg_A 51 AKIDLALGKLGLQPGMTLLDVGCG-WGATMMRAVEKY---DVNVVGLTLS-KNQANHVQQLVANSENLRSKRVLLAGWEQ 125 (287)
T ss_dssp HHHHHHHTTTTCCTTCEEEEETCT-TSHHHHHHHHHH---CCEEEEEESC-HHHHHHHHHHHHTCCCCSCEEEEESCGGG
T ss_pred HHHHHHHHHcCCCCcCEEEEECCc-ccHHHHHHHHHc---CCEEEEEECC-HHHHHHHHHHHHhcCCCCCeEEEECChhh
Confidence 344444443 456799999997 899999999654 4599999999 999999999986 666789999999976
Q ss_pred hhhhcCCCccEEEEcCCC---CCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 105 LLMGDYRGADFVLIDCNI---DIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 105 ~L~~~~~~~D~VfiD~~k---~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
++ ++||+|+...-- ...++..+++.+.+. |+| ||.+++....
T Consensus 126 -~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~--Lkp-gG~l~~~~~~ 170 (287)
T 1kpg_A 126 -FD---EPVDRIVSIGAFEHFGHERYDAFFSLAHRL--LPA-DGVMLLHTIT 170 (287)
T ss_dssp -CC---CCCSEEEEESCGGGTCTTTHHHHHHHHHHH--SCT-TCEEEEEEEE
T ss_pred -CC---CCeeEEEEeCchhhcChHHHHHHHHHHHHh--cCC-CCEEEEEEec
Confidence 33 789999976422 114678899999999 887 7777765443
No 135
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.17 E-value=1.1e-10 Score=96.23 Aligned_cols=110 Identities=12% Similarity=0.088 Sum_probs=85.6
Q ss_pred HHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhh
Q 042616 28 VGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLM 107 (220)
Q Consensus 28 ~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~ 107 (220)
...++..+....++.+||||||| +|..+..|+.. +.+|++||++ +.+++.|++.+.. +++++++|+.+..+
T Consensus 30 ~~~~~~~l~~~~~~~~vLDiGcG-~G~~~~~l~~~----~~~v~gvD~s-~~~~~~a~~~~~~---~v~~~~~d~~~~~~ 100 (250)
T 2p7i_A 30 HPFMVRAFTPFFRPGNLLELGSF-KGDFTSRLQEH----FNDITCVEAS-EEAISHAQGRLKD---GITYIHSRFEDAQL 100 (250)
T ss_dssp HHHHHHHHGGGCCSSCEEEESCT-TSHHHHHHTTT----CSCEEEEESC-HHHHHHHHHHSCS---CEEEEESCGGGCCC
T ss_pred HHHHHHHHHhhcCCCcEEEECCC-CCHHHHHHHHh----CCcEEEEeCC-HHHHHHHHHhhhC---CeEEEEccHHHcCc
Confidence 34455555556678899999997 99999988864 4589999999 9999999998753 79999999988632
Q ss_pred hcCCCccEEEEcCCC-CCccHHHHHHHHH-hhcCCCCCCEEEEEec
Q 042616 108 GDYRGADFVLIDCNI-DIDGHKNVFRAAK-ESVMHGSGAGVIVGYN 151 (220)
Q Consensus 108 ~~~~~~D~VfiD~~k-~~~~y~~~l~~l~-~~~~L~~~Ggviv~dN 151 (220)
.++||+|+.-.-. .-.+....++.+. +. |+| ||.+++..
T Consensus 101 --~~~fD~v~~~~~l~~~~~~~~~l~~~~~~~--Lkp-gG~l~i~~ 141 (250)
T 2p7i_A 101 --PRRYDNIVLTHVLEHIDDPVALLKRINDDW--LAE-GGRLFLVC 141 (250)
T ss_dssp --SSCEEEEEEESCGGGCSSHHHHHHHHHHTT--EEE-EEEEEEEE
T ss_pred --CCcccEEEEhhHHHhhcCHHHHHHHHHHHh--cCC-CCEEEEEc
Confidence 4789999986543 1135678899999 88 886 77766643
No 136
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.17 E-value=1.3e-10 Score=104.70 Aligned_cols=106 Identities=16% Similarity=0.129 Sum_probs=81.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcc-----cCC----cEEEEEcchhhhhhhc-
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGR-----YAN----CIEFVKGDAQKLLMGD- 109 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g-----~~~----~Ve~v~gda~~~L~~~- 109 (220)
++++||+||+| .|+++..+++. . ..+|++||+| +..++.||+++.. +.+ +++++++|+.++++..
T Consensus 188 ~pkrVL~IGgG-~G~~arellk~--~-~~~Vt~VEID-~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~ 262 (364)
T 2qfm_A 188 TGKDVLILGGG-DGGILCEIVKL--K-PKMVTMVEID-QMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYA 262 (364)
T ss_dssp TTCEEEEEECT-TCHHHHHHHTT--C-CSEEEEEESC-HHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHH
T ss_pred CCCEEEEEECC-hhHHHHHHHHC--C-CCEEEEEECC-HHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhh
Confidence 58999999986 89988877754 2 3799999999 9999999999861 322 7999999999999753
Q ss_pred --CCCccEEEEcCCC-CC---c--cH-HHHHHHH----HhhcCCCCCCEEEEEecCC
Q 042616 110 --YRGADFVLIDCNI-DI---D--GH-KNVFRAA----KESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 110 --~~~~D~VfiD~~k-~~---~--~y-~~~l~~l----~~~~~L~~~Ggviv~dNv~ 153 (220)
.+.||+||+|+.. +. . .| .+.++.+ .+. |+| ||++++....
T Consensus 263 ~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~--L~p-gGilv~qs~s 316 (364)
T 2qfm_A 263 KEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKV--LKQ-DGKYFTQGNC 316 (364)
T ss_dssp HHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHT--EEE-EEEEEEEEEE
T ss_pred ccCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhh--CCC-CcEEEEEcCC
Confidence 5789999999853 10 1 12 4556665 777 876 9999887543
No 137
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.17 E-value=7.1e-11 Score=101.37 Aligned_cols=109 Identities=9% Similarity=0.042 Sum_probs=80.7
Q ss_pred CChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchh
Q 042616 24 KEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQ 103 (220)
Q Consensus 24 ~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~ 103 (220)
-+++..++|..++ ....+||||||| +|..|..|+.. +.+|++||++ +.+++.|+++ .+|++++++++
T Consensus 25 yp~~l~~~l~~~~--~~~~~vLDvGcG-tG~~~~~l~~~----~~~v~gvD~s-~~ml~~a~~~-----~~v~~~~~~~e 91 (257)
T 4hg2_A 25 YPRALFRWLGEVA--PARGDALDCGCG-SGQASLGLAEF----FERVHAVDPG-EAQIRQALRH-----PRVTYAVAPAE 91 (257)
T ss_dssp CCHHHHHHHHHHS--SCSSEEEEESCT-TTTTHHHHHTT----CSEEEEEESC-HHHHHTCCCC-----TTEEEEECCTT
T ss_pred cHHHHHHHHHHhc--CCCCCEEEEcCC-CCHHHHHHHHh----CCEEEEEeCc-HHhhhhhhhc-----CCceeehhhhh
Confidence 3444445544432 234789999997 99999988863 6899999999 9888776643 57999999998
Q ss_pred hhhhhcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEE
Q 042616 104 KLLMGDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 104 ~~L~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
++ +--.++||+|+.-..-+--+....++.+.+. |+| ||++++
T Consensus 92 ~~-~~~~~sfD~v~~~~~~h~~~~~~~~~e~~rv--Lkp-gG~l~~ 133 (257)
T 4hg2_A 92 DT-GLPPASVDVAIAAQAMHWFDLDRFWAELRRV--ARP-GAVFAA 133 (257)
T ss_dssp CC-CCCSSCEEEEEECSCCTTCCHHHHHHHHHHH--EEE-EEEEEE
T ss_pred hh-cccCCcccEEEEeeehhHhhHHHHHHHHHHH--cCC-CCEEEE
Confidence 74 3325789999986554334568889999999 887 776544
No 138
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.17 E-value=1.1e-10 Score=103.64 Aligned_cols=108 Identities=15% Similarity=0.113 Sum_probs=84.8
Q ss_pred HHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhh
Q 042616 28 VGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKL 105 (220)
Q Consensus 28 ~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~ 105 (220)
..+.+..+....+.++|||+||| +|..++. |. . +.+|+++|.+ +.+++.|++|++ ++.++++++++|+.++
T Consensus 183 ~~er~~i~~~~~~~~~VLDlg~G-~G~~~l~-a~---~-~~~V~~vD~s-~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~ 255 (336)
T 2yx1_A 183 GGERARIMKKVSLNDVVVDMFAG-VGPFSIA-CK---N-AKKIYAIDIN-PHAIELLKKNIKLNKLEHKIIPILSDVREV 255 (336)
T ss_dssp HHHHHHHHHHCCTTCEEEETTCT-TSHHHHH-TT---T-SSEEEEEESC-HHHHHHHHHHHHHTTCTTTEEEEESCGGGC
T ss_pred HHHHHHHHHhcCCCCEEEEccCc-cCHHHHh-cc---C-CCEEEEEECC-HHHHHHHHHHHHHcCCCCcEEEEECChHHh
Confidence 34444333333577899999997 9999998 65 2 6899999999 999999999997 6667899999999987
Q ss_pred hhhcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 106 LMGDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 106 L~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
+ ..||+||+|.+. . ..++++.+.+. |+| ||++++...
T Consensus 256 ~----~~fD~Vi~dpP~--~-~~~~l~~~~~~--L~~-gG~l~~~~~ 292 (336)
T 2yx1_A 256 D----VKGNRVIMNLPK--F-AHKFIDKALDI--VEE-GGVIHYYTI 292 (336)
T ss_dssp C----CCEEEEEECCTT--T-GGGGHHHHHHH--EEE-EEEEEEEEE
T ss_pred c----CCCcEEEECCcH--h-HHHHHHHHHHH--cCC-CCEEEEEEe
Confidence 6 689999999876 2 34778888888 776 887766533
No 139
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.17 E-value=1.1e-10 Score=104.68 Aligned_cols=86 Identities=9% Similarity=0.064 Sum_probs=69.7
Q ss_pred CCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhcC--------
Q 042616 41 AQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGDY-------- 110 (220)
Q Consensus 41 a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~~-------- 110 (220)
+++|||+||| +|..|+.||.. .++|++||.+ +++++.|++|++ ++ ++++++++|+.+.++.+.
T Consensus 214 ~~~vLDl~cG-~G~~~l~la~~----~~~V~gvd~~-~~ai~~a~~n~~~ng~-~~v~~~~~d~~~~~~~~~~~~~~~~l 286 (369)
T 3bt7_A 214 KGDLLELYCG-NGNFSLALARN----FDRVLATEIA-KPSVAAAQYNIAANHI-DNVQIIRMAAEEFTQAMNGVREFNRL 286 (369)
T ss_dssp CSEEEEESCT-TSHHHHHHGGG----SSEEEEECCC-HHHHHHHHHHHHHTTC-CSEEEECCCSHHHHHHHSSCCCCTTG
T ss_pred CCEEEEccCC-CCHHHHHHHhc----CCEEEEEECC-HHHHHHHHHHHHHcCC-CceEEEECCHHHHHHHHhhccccccc
Confidence 5789999997 99999988863 5799999999 999999999997 66 689999999999876432
Q ss_pred -------CCccEEEEcCCCCCccHHHHHHHH
Q 042616 111 -------RGADFVLIDCNIDIDGHKNVFRAA 134 (220)
Q Consensus 111 -------~~~D~VfiD~~k~~~~y~~~l~~l 134 (220)
..||+||+|.+. .+...+.++.+
T Consensus 287 ~~~~~~~~~fD~Vv~dPPr-~g~~~~~~~~l 316 (369)
T 3bt7_A 287 QGIDLKSYQCETIFVDPPR-SGLDSETEKMV 316 (369)
T ss_dssp GGSCGGGCCEEEEEECCCT-TCCCHHHHHHH
T ss_pred cccccccCCCCEEEECcCc-cccHHHHHHHH
Confidence 279999999987 12334444444
No 140
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.16 E-value=9.8e-11 Score=97.70 Aligned_cols=117 Identities=15% Similarity=0.060 Sum_probs=86.2
Q ss_pred hHHHHHHHHHhhC----CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhccc-CCcEEEEEcc
Q 042616 27 DVGEFISALAAGN----NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRY-ANCIEFVKGD 101 (220)
Q Consensus 27 ~~~~~L~~La~~~----~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~-~~~Ve~v~gd 101 (220)
....++..++... ++.+||||||| +|..+..|+... ..+|+++|.+ +.+++.|++++... ..+++++++|
T Consensus 62 ~~~~~~~~l~~~~~~~~~~~~vLDiGcG-~G~~~~~l~~~~---~~~v~~vD~s-~~~~~~a~~~~~~~~~~~~~~~~~d 136 (241)
T 2ex4_A 62 SSRKFLQRFLREGPNKTGTSCALDCGAG-IGRITKRLLLPL---FREVDMVDIT-EDFLVQAKTYLGEEGKRVRNYFCCG 136 (241)
T ss_dssp HHHHHHHGGGC----CCCCSEEEEETCT-TTHHHHHTTTTT---CSEEEEEESC-HHHHHHHHHHTGGGGGGEEEEEECC
T ss_pred hHHHHHHHHHHhcccCCCCCEEEEECCC-CCHHHHHHHHhc---CCEEEEEeCC-HHHHHHHHHHhhhcCCceEEEEEcC
Confidence 3456666665543 57899999997 999999887643 4699999999 99999999998732 3579999999
Q ss_pred hhhhhhhcCCCccEEEEcCCCCC---ccHHHHHHHHHhhcCCCCCCEEEEE-ecC
Q 042616 102 AQKLLMGDYRGADFVLIDCNIDI---DGHKNVFRAAKESVMHGSGAGVIVG-YNA 152 (220)
Q Consensus 102 a~~~L~~~~~~~D~VfiD~~k~~---~~y~~~l~~l~~~~~L~~~Ggviv~-dNv 152 (220)
+.+.... .++||+|+.+..... ..+..+++.+.+. |+| ||.+++ ++.
T Consensus 137 ~~~~~~~-~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~--Lkp-gG~l~i~~~~ 187 (241)
T 2ex4_A 137 LQDFTPE-PDSYDVIWIQWVIGHLTDQHLAEFLRRCKGS--LRP-NGIIVIKDNM 187 (241)
T ss_dssp GGGCCCC-SSCEEEEEEESCGGGSCHHHHHHHHHHHHHH--EEE-EEEEEEEEEE
T ss_pred hhhcCCC-CCCEEEEEEcchhhhCCHHHHHHHHHHHHHh--cCC-CeEEEEEEcc
Confidence 8775322 457999998865311 2245789999998 887 666655 543
No 141
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.16 E-value=1.1e-10 Score=105.37 Aligned_cols=110 Identities=15% Similarity=0.037 Sum_probs=84.3
Q ss_pred HHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCC--cEEEEEcchhhhh
Q 042616 31 FISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYAN--CIEFVKGDAQKLL 106 (220)
Q Consensus 31 ~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~--~Ve~v~gda~~~L 106 (220)
++.......+..+|||+||| +|..++.++...+ +.+|++||.+ +.+++.|+++++ ++.+ +++++.+|+.+.+
T Consensus 213 ~ll~~l~~~~~~~VLDlGcG-~G~~s~~la~~~p--~~~V~gvD~s-~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~ 288 (375)
T 4dcm_A 213 FFMQHLPENLEGEIVDLGCG-NGVIGLTLLDKNP--QAKVVFVDES-PMAVASSRLNVETNMPEALDRCEFMINNALSGV 288 (375)
T ss_dssp HHHHTCCCSCCSEEEEETCT-TCHHHHHHHHHCT--TCEEEEEESC-HHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTC
T ss_pred HHHHhCcccCCCeEEEEeCc-chHHHHHHHHHCC--CCEEEEEECc-HHHHHHHHHHHHHcCCCcCceEEEEechhhccC
Confidence 34333344455899999997 9999999998754 6899999999 999999999997 5533 5899999998865
Q ss_pred hhcCCCccEEEEcCCCC------CccHHHHHHHHHhhcCCCCCCEEEEE
Q 042616 107 MGDYRGADFVLIDCNID------IDGHKNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 107 ~~~~~~~D~VfiD~~k~------~~~y~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
+ .+.||+|+.|.+-. .....++++.+.+. |+| ||.+++
T Consensus 289 ~--~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~--Lkp-gG~l~i 332 (375)
T 4dcm_A 289 E--PFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRC--LKI-NGELYI 332 (375)
T ss_dssp C--TTCEEEEEECCCC-------CCHHHHHHHHHHHH--EEE-EEEEEE
T ss_pred C--CCCeeEEEECCCcccCcccCHHHHHHHHHHHHHh--CCC-CcEEEE
Confidence 4 36899999987641 12335678999998 887 666544
No 142
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.16 E-value=1.8e-10 Score=93.21 Aligned_cols=113 Identities=13% Similarity=0.073 Sum_probs=88.9
Q ss_pred CChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchh
Q 042616 24 KEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQ 103 (220)
Q Consensus 24 ~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~ 103 (220)
..+...+++..+.... ..+|||+||| +|..+..|+.. +.+|+++|++ +.+++.|+++. .+++++++|+.
T Consensus 26 ~~~~~~~~l~~~~~~~-~~~vLDiGcG-~G~~~~~l~~~----~~~v~gvD~s-~~~~~~a~~~~----~~~~~~~~d~~ 94 (203)
T 3h2b_A 26 AEDPDRVLIEPWATGV-DGVILDVGSG-TGRWTGHLASL----GHQIEGLEPA-TRLVELARQTH----PSVTFHHGTIT 94 (203)
T ss_dssp TTCTTHHHHHHHHHHC-CSCEEEETCT-TCHHHHHHHHT----TCCEEEECCC-HHHHHHHHHHC----TTSEEECCCGG
T ss_pred ccHHHHHHHHHHhccC-CCeEEEecCC-CCHHHHHHHhc----CCeEEEEeCC-HHHHHHHHHhC----CCCeEEeCccc
Confidence 3455667777776655 7889999997 99999999875 5699999999 99999999884 47999999998
Q ss_pred hhhhhcCCCccEEEEcCCCC---CccHHHHHHHHHhhcCCCCCCEEEEEec
Q 042616 104 KLLMGDYRGADFVLIDCNID---IDGHKNVFRAAKESVMHGSGAGVIVGYN 151 (220)
Q Consensus 104 ~~L~~~~~~~D~VfiD~~k~---~~~y~~~l~~l~~~~~L~~~Ggviv~dN 151 (220)
+. +...++||+|+...... ..+....++.+.+. |+| ||.+++..
T Consensus 95 ~~-~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~--L~p-gG~l~i~~ 141 (203)
T 3h2b_A 95 DL-SDSPKRWAGLLAWYSLIHMGPGELPDALVALRMA--VED-GGGLLMSF 141 (203)
T ss_dssp GG-GGSCCCEEEEEEESSSTTCCTTTHHHHHHHHHHT--EEE-EEEEEEEE
T ss_pred cc-ccCCCCeEEEEehhhHhcCCHHHHHHHHHHHHHH--cCC-CcEEEEEE
Confidence 84 33357899999865321 14678899999998 886 78777654
No 143
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.16 E-value=2e-10 Score=93.32 Aligned_cols=111 Identities=17% Similarity=0.141 Sum_probs=86.0
Q ss_pred HHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhh
Q 042616 28 VGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLM 107 (220)
Q Consensus 28 ~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~ 107 (220)
...++..+....+..+||||||| +|..+..|+.. +.+|+++|++ +.+++.|++ .+. .+++++++|+.+..+
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G-~G~~~~~l~~~----~~~v~~~D~s-~~~~~~a~~--~~~-~~~~~~~~d~~~~~~ 104 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASG-TGYWTRHLSGL----ADRVTALDGS-AEMIAEAGR--HGL-DNVEFRQQDLFDWTP 104 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCT-TSHHHHHHHHH----SSEEEEEESC-HHHHHHHGG--GCC-TTEEEEECCTTSCCC
T ss_pred HHHHHHHHhcCCCCCeEEEECCC-CCHHHHHHHhc----CCeEEEEeCC-HHHHHHHHh--cCC-CCeEEEecccccCCC
Confidence 44566666556677899999997 99999999986 6799999999 999999998 343 579999999988632
Q ss_pred hcCCCccEEEEcCCCCC---ccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 108 GDYRGADFVLIDCNIDI---DGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 108 ~~~~~~D~VfiD~~k~~---~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
.++||+|+....... .....+++.+.+. |+| ||.+++...
T Consensus 105 --~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~--L~p-gG~l~~~~~ 147 (218)
T 3ou2_A 105 --DRQWDAVFFAHWLAHVPDDRFEAFWESVRSA--VAP-GGVVEFVDV 147 (218)
T ss_dssp --SSCEEEEEEESCGGGSCHHHHHHHHHHHHHH--EEE-EEEEEEEEE
T ss_pred --CCceeEEEEechhhcCCHHHHHHHHHHHHHH--cCC-CeEEEEEeC
Confidence 478999998764411 1237789999998 887 777666544
No 144
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.16 E-value=4.1e-11 Score=99.48 Aligned_cols=107 Identities=7% Similarity=-0.067 Sum_probs=82.4
Q ss_pred hhHHHHHHHHHh--hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchh
Q 042616 26 PDVGEFISALAA--GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQ 103 (220)
Q Consensus 26 p~~~~~L~~La~--~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~ 103 (220)
|....++..+.. ..+..+|||+||| +|+.+..|+.. +.+|+++|++ +.+++.|+++. .+++++++|+.
T Consensus 32 ~~~~~l~~~~~~~~~~~~~~vLDiGcG-~G~~~~~l~~~----~~~v~~vD~s-~~~~~~a~~~~----~~~~~~~~d~~ 101 (226)
T 3m33_A 32 PDPELTFDLWLSRLLTPQTRVLEAGCG-HGPDAARFGPQ----AARWAAYDFS-PELLKLARANA----PHADVYEWNGK 101 (226)
T ss_dssp SCTTHHHHHHHHHHCCTTCEEEEESCT-TSHHHHHHGGG----SSEEEEEESC-HHHHHHHHHHC----TTSEEEECCSC
T ss_pred CCHHHHHHHHHHhcCCCCCeEEEeCCC-CCHHHHHHHHc----CCEEEEEECC-HHHHHHHHHhC----CCceEEEcchh
Confidence 444444444443 3567899999997 99999998875 6799999999 99999999983 57999999997
Q ss_pred hhhhhc-CCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 104 KLLMGD-YRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 104 ~~L~~~-~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
+.+|.. .++||+|+...+. ...++.+.+. |+| ||.++..
T Consensus 102 ~~~~~~~~~~fD~v~~~~~~-----~~~l~~~~~~--Lkp-gG~l~~~ 141 (226)
T 3m33_A 102 GELPAGLGAPFGLIVSRRGP-----TSVILRLPEL--AAP-DAHFLYV 141 (226)
T ss_dssp SSCCTTCCCCEEEEEEESCC-----SGGGGGHHHH--EEE-EEEEEEE
T ss_pred hccCCcCCCCEEEEEeCCCH-----HHHHHHHHHH--cCC-CcEEEEe
Confidence 767643 4689999987444 3556777777 776 8888843
No 145
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.15 E-value=8e-11 Score=97.74 Aligned_cols=101 Identities=12% Similarity=0.051 Sum_probs=80.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhcCCCccEE
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGDYRGADFV 116 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~~~~~D~V 116 (220)
.++.+||||||| +|..+..|+. + +.+|+++|++ +.+++.|++++. +...+++++++|+.+..+ ..+||+|
T Consensus 65 ~~~~~vLDiGcG-~G~~~~~l~~---~-~~~v~gvD~s-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~fD~v 136 (235)
T 3lcc_A 65 LPLGRALVPGCG-GGHDVVAMAS---P-ERFVVGLDIS-ESALAKANETYGSSPKAEYFSFVKEDVFTWRP--TELFDLI 136 (235)
T ss_dssp SCCEEEEEETCT-TCHHHHHHCB---T-TEEEEEECSC-HHHHHHHHHHHTTSGGGGGEEEECCCTTTCCC--SSCEEEE
T ss_pred CCCCCEEEeCCC-CCHHHHHHHh---C-CCeEEEEECC-HHHHHHHHHHhhccCCCcceEEEECchhcCCC--CCCeeEE
Confidence 345799999997 9999998864 2 7899999999 999999999987 455789999999988543 3689999
Q ss_pred EEcCCC---CCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 117 LIDCNI---DIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 117 fiD~~k---~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
+.-... +..+...+++.+.+. |+| ||.+++-
T Consensus 137 ~~~~~l~~~~~~~~~~~l~~~~~~--Lkp-gG~l~~~ 170 (235)
T 3lcc_A 137 FDYVFFCAIEPEMRPAWAKSMYEL--LKP-DGELITL 170 (235)
T ss_dssp EEESSTTTSCGGGHHHHHHHHHHH--EEE-EEEEEEE
T ss_pred EEChhhhcCCHHHHHHHHHHHHHH--CCC-CcEEEEE
Confidence 965432 113678899999998 886 7777654
No 146
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.15 E-value=1.1e-10 Score=95.94 Aligned_cols=113 Identities=15% Similarity=0.050 Sum_probs=82.1
Q ss_pred CChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcc-------------
Q 042616 24 KEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGR------------- 90 (220)
Q Consensus 24 ~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g------------- 90 (220)
..|...+++..+ ...++.+|||+||| +|..+.+||.. +.+|++||.+ +++++.|++..+.
T Consensus 7 ~~~~l~~~~~~l-~~~~~~~vLD~GCG-~G~~~~~la~~----g~~V~gvD~S-~~~l~~a~~~~~~~~~~~~~~~~~~~ 79 (203)
T 1pjz_A 7 VNKDLQQYWSSL-NVVPGARVLVPLCG-KSQDMSWLSGQ----GYHVVGAELS-EAAVERYFTERGEQPHITSQGDFKVY 79 (203)
T ss_dssp STHHHHHHHHHH-CCCTTCEEEETTTC-CSHHHHHHHHH----CCEEEEEEEC-HHHHHHHHHHHCSCSEEEEETTEEEE
T ss_pred CCHHHHHHHHhc-ccCCCCEEEEeCCC-CcHhHHHHHHC----CCeEEEEeCC-HHHHHHHHHHccCCcccccccccccc
Confidence 345555665544 33467899999997 99999999984 6799999999 9999999987641
Q ss_pred cCCcEEEEEcchhhhhhhcCCCccEEEEcCCC---CCccHHHHHHHHHhhcCCCCCCEE
Q 042616 91 YANCIEFVKGDAQKLLMGDYRGADFVLIDCNI---DIDGHKNVFRAAKESVMHGSGAGV 146 (220)
Q Consensus 91 ~~~~Ve~v~gda~~~L~~~~~~~D~VfiD~~k---~~~~y~~~l~~l~~~~~L~~~Ggv 146 (220)
...+|+++++|+.+.-+...++||+|+.-..- ...+...+++.+.+. |+| ||.
T Consensus 80 ~~~~v~~~~~d~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~--Lkp-gG~ 135 (203)
T 1pjz_A 80 AAPGIEIWCGDFFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEAL--MPQ-ACS 135 (203)
T ss_dssp ECSSSEEEEECCSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHH--SCS-EEE
T ss_pred cCCccEEEECccccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHH--cCC-CcE
Confidence 13579999999987532211589999853322 012335688999998 886 886
No 147
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.14 E-value=3e-10 Score=94.98 Aligned_cols=122 Identities=11% Similarity=0.013 Sum_probs=93.0
Q ss_pred CCCCChhHHHHHHHHHhh---CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEE
Q 042616 21 KRGKEPDVGEFISALAAG---NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEF 97 (220)
Q Consensus 21 ~~~~~p~~~~~L~~La~~---~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~ 97 (220)
...+.|...+.+..++.. .++.+||||||| +|..+..|+... +.+|++||++ +.+++.|++++... .++++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~---~~~v~~vD~s-~~~~~~a~~~~~~~-~~~~~ 106 (266)
T 3ujc_A 33 ENYISSGGLEATKKILSDIELNENSKVLDIGSG-LGGGCMYINEKY---GAHTHGIDIC-SNIVNMANERVSGN-NKIIF 106 (266)
T ss_dssp TTCCSTTHHHHHHHHTTTCCCCTTCEEEEETCT-TSHHHHHHHHHH---CCEEEEEESC-HHHHHHHHHTCCSC-TTEEE
T ss_pred CCccccchHHHHHHHHHhcCCCCCCEEEEECCC-CCHHHHHHHHHc---CCEEEEEeCC-HHHHHHHHHHhhcC-CCeEE
Confidence 344555555555555554 456799999997 999999999865 5799999999 99999999998744 78999
Q ss_pred EEcchhhhhhhcCCCccEEEEcCCCCC---ccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 98 VKGDAQKLLMGDYRGADFVLIDCNIDI---DGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 98 v~gda~~~L~~~~~~~D~VfiD~~k~~---~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
+++|+.+. +...++||+|+....... .+...+++.+.+. |+| ||.+++.+.
T Consensus 107 ~~~d~~~~-~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~--L~p-gG~l~~~~~ 160 (266)
T 3ujc_A 107 EANDILTK-EFPENNFDLIYSRDAILALSLENKNKLFQKCYKW--LKP-TGTLLITDY 160 (266)
T ss_dssp EECCTTTC-CCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHH--EEE-EEEEEEEEE
T ss_pred EECccccC-CCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHH--cCC-CCEEEEEEe
Confidence 99999874 332578999998754311 4567889999998 887 777776544
No 148
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.14 E-value=1.8e-10 Score=97.30 Aligned_cols=103 Identities=7% Similarity=-0.095 Sum_probs=79.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--------ccCCcEEEEEcchhhhhhhc-
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--------RYANCIEFVKGDAQKLLMGD- 109 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--------g~~~~Ve~v~gda~~~L~~~- 109 (220)
.+..+||||||| +|..++.||...+ +..|++||++ +.+++.|+++++ ++ .+|+++++|+.+.++..
T Consensus 45 ~~~~~vLDiGcG-~G~~~~~la~~~p--~~~v~GiDis-~~~l~~A~~~~~~l~~~~~~~~-~nv~~~~~d~~~~l~~~~ 119 (235)
T 3ckk_A 45 QAQVEFADIGCG-YGGLLVELSPLFP--DTLILGLEIR-VKVSDYVQDRIRALRAAPAGGF-QNIACLRSNAMKHLPNFF 119 (235)
T ss_dssp -CCEEEEEETCT-TCHHHHHHGGGST--TSEEEEEESC-HHHHHHHHHHHHHHHHSTTCCC-TTEEEEECCTTTCHHHHC
T ss_pred CCCCeEEEEccC-CcHHHHHHHHHCC--CCeEEEEECC-HHHHHHHHHHHHHHHHHHhcCC-CeEEEEECcHHHhhhhhC
Confidence 456789999997 9999999998654 5799999999 999999998764 23 57999999998866532
Q ss_pred -CCCccEEEEcCCC---------CCccHHHHHHHHHhhcCCCCCCEEEEE
Q 042616 110 -YRGADFVLIDCNI---------DIDGHKNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 110 -~~~~D~VfiD~~k---------~~~~y~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
.+.||.|++.... +.-.+..+++.+.+. |+| ||.+++
T Consensus 120 ~~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~--Lkp-GG~l~~ 166 (235)
T 3ckk_A 120 YKGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYV--LRV-GGLVYT 166 (235)
T ss_dssp CTTCEEEEEEESCC-----------CCCHHHHHHHHHH--EEE-EEEEEE
T ss_pred CCcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHH--CCC-CCEEEE
Confidence 4689999986432 001235789999998 887 777665
No 149
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.13 E-value=6.3e-10 Score=90.21 Aligned_cols=113 Identities=11% Similarity=0.063 Sum_probs=84.9
Q ss_pred CCCChhHHHHHHHHHhh---CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEE
Q 042616 22 RGKEPDVGEFISALAAG---NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFV 98 (220)
Q Consensus 22 ~~~~p~~~~~L~~La~~---~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v 98 (220)
....+..++.+..++.. .++++|||+||| +|..++.|+.. + ..+|++||.+ +.+++.|++++. +++++
T Consensus 30 ~~~~~~~~~~l~~~~~~~~~~~~~~vlD~gcG-~G~~~~~l~~~-~--~~~v~~vD~~-~~~~~~a~~~~~----~~~~~ 100 (200)
T 1ne2_A 30 YPTDASTAAYFLIEIYNDGNIGGRSVIDAGTG-NGILACGSYLL-G--AESVTAFDID-PDAIETAKRNCG----GVNFM 100 (200)
T ss_dssp CCCCHHHHHHHHHHHHHHTSSBTSEEEEETCT-TCHHHHHHHHT-T--BSEEEEEESC-HHHHHHHHHHCT----TSEEE
T ss_pred cCCCHHHHHHHHHHHHhcCCCCCCEEEEEeCC-ccHHHHHHHHc-C--CCEEEEEECC-HHHHHHHHHhcC----CCEEE
Confidence 34566666666665553 367899999997 99999998875 1 4589999999 999999999975 79999
Q ss_pred EcchhhhhhhcCCCccEEEEcCCCC---CccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 99 KGDAQKLLMGDYRGADFVLIDCNID---IDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 99 ~gda~~~L~~~~~~~D~VfiD~~k~---~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
++|+.+ ++ ++||+|+.|.+-. ......+++.+.+. + |+++++.|.
T Consensus 101 ~~d~~~-~~---~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~--~---g~~~~~~~~ 148 (200)
T 1ne2_A 101 VADVSE-IS---GKYDTWIMNPPFGSVVKHSDRAFIDKAFET--S---MWIYSIGNA 148 (200)
T ss_dssp ECCGGG-CC---CCEEEEEECCCC-------CHHHHHHHHHH--E---EEEEEEEEG
T ss_pred ECcHHH-CC---CCeeEEEECCCchhccCchhHHHHHHHHHh--c---CcEEEEEcC
Confidence 999988 33 6899999998731 02335678888887 3 667666643
No 150
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.13 E-value=2.1e-10 Score=103.06 Aligned_cols=119 Identities=14% Similarity=0.160 Sum_probs=92.2
Q ss_pred CCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEc
Q 042616 23 GKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKG 100 (220)
Q Consensus 23 ~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~g 100 (220)
.+.+..++.|..++ ..+...|||+||| +|..++.+|...+ .++|+++|.+ +.+++.|++|++ ++.++|+++++
T Consensus 201 ~l~~~la~~l~~~~-~~~~~~vLD~gCG-sG~~~i~~a~~~~--~~~v~g~Dis-~~~l~~A~~n~~~~gl~~~i~~~~~ 275 (373)
T 3tm4_A 201 HLKASIANAMIELA-ELDGGSVLDPMCG-SGTILIELALRRY--SGEIIGIEKY-RKHLIGAEMNALAAGVLDKIKFIQG 275 (373)
T ss_dssp CCCHHHHHHHHHHH-TCCSCCEEETTCT-TCHHHHHHHHTTC--CSCEEEEESC-HHHHHHHHHHHHHTTCGGGCEEEEC
T ss_pred CccHHHHHHHHHhh-cCCCCEEEEccCc-CcHHHHHHHHhCC--CCeEEEEeCC-HHHHHHHHHHHHHcCCCCceEEEEC
Confidence 45677888888887 6677899999997 9999999887543 3699999999 999999999997 77678999999
Q ss_pred chhhhhhhcCCCccEEEEcCCCCC---------ccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 101 DAQKLLMGDYRGADFVLIDCNIDI---------DGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 101 da~~~L~~~~~~~D~VfiD~~k~~---------~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
|+.+.. ...++||+|+.|.+-.. ..|..+++.+.+. | +.+++++..
T Consensus 276 D~~~~~-~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~--l-~g~~~~i~~ 330 (373)
T 3tm4_A 276 DATQLS-QYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKV--L-EKRGVFITT 330 (373)
T ss_dssp CGGGGG-GTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHH--E-EEEEEEEES
T ss_pred ChhhCC-cccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHH--c-CCeEEEEEC
Confidence 999854 32478999999976310 1357788888887 6 334444443
No 151
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.13 E-value=1.6e-10 Score=95.52 Aligned_cols=114 Identities=14% Similarity=0.028 Sum_probs=88.2
Q ss_pred hhHHHHHHHHHhhC--CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchh
Q 042616 26 PDVGEFISALAAGN--NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQ 103 (220)
Q Consensus 26 p~~~~~L~~La~~~--~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~ 103 (220)
....+++..++... ++.+|||+||| +|..+..|+.. +.+++++|++ +.+++.|++++.....+++++++|+.
T Consensus 21 ~~~~~~~~~~l~~~~~~~~~vLdiG~G-~G~~~~~l~~~----~~~~~~~D~s-~~~~~~a~~~~~~~~~~~~~~~~d~~ 94 (246)
T 1y8c_A 21 KKWSDFIIEKCVENNLVFDDYLDLACG-TGNLTENLCPK----FKNTWAVDLS-QEMLSEAENKFRSQGLKPRLACQDIS 94 (246)
T ss_dssp HHHHHHHHHHHHTTTCCTTEEEEETCT-TSTTHHHHGGG----SSEEEEECSC-HHHHHHHHHHHHHTTCCCEEECCCGG
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEeCCC-CCHHHHHHHHC----CCcEEEEECC-HHHHHHHHHHHhhcCCCeEEEecccc
Confidence 44566777776665 77899999997 99999988874 5699999999 99999999998732237999999998
Q ss_pred hhhhhcCCCccEEEEcC-CC-CC---ccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 104 KLLMGDYRGADFVLIDC-NI-DI---DGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 104 ~~L~~~~~~~D~VfiD~-~k-~~---~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
+.. . .++||+|+... .- .- .+....++.+.+. |+| ||+++++
T Consensus 95 ~~~-~-~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~--L~p-gG~l~~~ 141 (246)
T 1y8c_A 95 NLN-I-NRKFDLITCCLDSTNYIIDSDDLKKYFKAVSNH--LKE-GGVFIFD 141 (246)
T ss_dssp GCC-C-SCCEEEEEECTTGGGGCCSHHHHHHHHHHHHTT--EEE-EEEEEEE
T ss_pred cCC-c-cCCceEEEEcCccccccCCHHHHHHHHHHHHHh--cCC-CcEEEEE
Confidence 743 2 37899999976 21 01 3457788888888 876 8988874
No 152
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.13 E-value=1.2e-10 Score=97.05 Aligned_cols=99 Identities=13% Similarity=-0.020 Sum_probs=78.2
Q ss_pred hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc-CCCccEE
Q 042616 38 GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD-YRGADFV 116 (220)
Q Consensus 38 ~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~-~~~~D~V 116 (220)
..++++||||||| +|..+..|+.. +.+|++||++ +++++.|+++ ++++++|+.+.+..+ .++||+|
T Consensus 39 ~~~~~~vLDiGcG-~G~~~~~l~~~----~~~v~gvD~s-~~~~~~a~~~-------~~~~~~d~~~~~~~~~~~~fD~i 105 (240)
T 3dli_A 39 FKGCRRVLDIGCG-RGEFLELCKEE----GIESIGVDIN-EDMIKFCEGK-------FNVVKSDAIEYLKSLPDKYLDGV 105 (240)
T ss_dssp TTTCSCEEEETCT-TTHHHHHHHHH----TCCEEEECSC-HHHHHHHHTT-------SEEECSCHHHHHHTSCTTCBSEE
T ss_pred hcCCCeEEEEeCC-CCHHHHHHHhC----CCcEEEEECC-HHHHHHHHhh-------cceeeccHHHHhhhcCCCCeeEE
Confidence 3456899999997 99999988875 5689999999 9999988875 789999999876332 4789999
Q ss_pred EEcCCC---CCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 117 LIDCNI---DIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 117 fiD~~k---~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
+...-. ...++..+++.+.+. |+| ||.+++...
T Consensus 106 ~~~~~l~~~~~~~~~~~l~~~~~~--Lkp-gG~l~~~~~ 141 (240)
T 3dli_A 106 MISHFVEHLDPERLFELLSLCYSK--MKY-SSYIVIESP 141 (240)
T ss_dssp EEESCGGGSCGGGHHHHHHHHHHH--BCT-TCCEEEEEE
T ss_pred EECCchhhCCcHHHHHHHHHHHHH--cCC-CcEEEEEeC
Confidence 986533 113668899999999 887 777766533
No 153
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.13 E-value=7.1e-10 Score=94.76 Aligned_cols=120 Identities=13% Similarity=0.074 Sum_probs=91.9
Q ss_pred CCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--cc---CCcEE
Q 042616 22 RGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RY---ANCIE 96 (220)
Q Consensus 22 ~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~---~~~Ve 96 (220)
........++|..++...++.+||||||| +|..+..|+.. +.+|+++|++ +.+++.|++++. +. ..+++
T Consensus 39 ~~~~~~~~~~l~~~l~~~~~~~vLDiGcG-~G~~~~~l~~~----~~~v~gvD~s-~~~l~~a~~~~~~~~~~~~~~~~~ 112 (293)
T 3thr_A 39 RSRTAEYKAWLLGLLRQHGCHRVLDVACG-TGVDSIMLVEE----GFSVTSVDAS-DKMLKYALKERWNRRKEPAFDKWV 112 (293)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEETTCT-TSHHHHHHHHT----TCEEEEEESC-HHHHHHHHHHHHHTTTSHHHHTCE
T ss_pred cchHHHHHHHHHHHhcccCCCEEEEecCC-CCHHHHHHHHC----CCeEEEEECC-HHHHHHHHHhhhhcccccccceee
Confidence 34445667888888888889999999997 99999999875 5699999999 999999998863 11 14689
Q ss_pred EEEcchhhhhhh--cCCCccEEEEcC--CCCCcc-------HHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 97 FVKGDAQKLLMG--DYRGADFVLIDC--NIDIDG-------HKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 97 ~v~gda~~~L~~--~~~~~D~VfiD~--~k~~~~-------y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
+..+|+.+.... ..++||+|+.-+ -..-.+ ...+++.+.+. |+| ||++++.
T Consensus 113 ~~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~--Lkp-gG~l~~~ 174 (293)
T 3thr_A 113 IEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASM--VRP-GGLLVID 174 (293)
T ss_dssp EEECCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHT--EEE-EEEEEEE
T ss_pred EeecChhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHH--cCC-CeEEEEE
Confidence 999999875411 147899999852 111123 67889999998 886 8888765
No 154
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.13 E-value=2.7e-10 Score=92.07 Aligned_cols=113 Identities=10% Similarity=-0.003 Sum_probs=83.6
Q ss_pred HHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc
Q 042616 30 EFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD 109 (220)
Q Consensus 30 ~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~ 109 (220)
+++..++...++.+||||||| +|..+..|+.. +.+|+++|.+ +.+++.|++++.....+++++++|+.+. +..
T Consensus 19 ~~l~~~~~~~~~~~vLdiGcG-~G~~~~~l~~~----~~~v~~vD~s-~~~~~~a~~~~~~~~~~~~~~~~d~~~~-~~~ 91 (202)
T 2kw5_A 19 DFLVSVANQIPQGKILCLAEG-EGRNACFLASL----GYEVTAVDQS-SVGLAKAKQLAQEKGVKITTVQSNLADF-DIV 91 (202)
T ss_dssp SSHHHHHHHSCSSEEEECCCS-CTHHHHHHHTT----TCEEEEECSS-HHHHHHHHHHHHHHTCCEEEECCBTTTB-SCC
T ss_pred HHHHHHHHhCCCCCEEEECCC-CCHhHHHHHhC----CCeEEEEECC-HHHHHHHHHHHHhcCCceEEEEcChhhc-CCC
Confidence 444445554455599999997 89999988864 5799999999 9999999999872223799999998874 322
Q ss_pred CCCccEEEEcCCCC-CccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 110 YRGADFVLIDCNID-IDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 110 ~~~~D~VfiD~~k~-~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
.+.||+|+.....- ..+...+++.+.+. |+| ||.+++...
T Consensus 92 ~~~fD~v~~~~~~~~~~~~~~~l~~~~~~--L~p-gG~l~~~~~ 132 (202)
T 2kw5_A 92 ADAWEGIVSIFCHLPSSLRQQLYPKVYQG--LKP-GGVFILEGF 132 (202)
T ss_dssp TTTCSEEEEECCCCCHHHHHHHHHHHHTT--CCS-SEEEEEEEE
T ss_pred cCCccEEEEEhhcCCHHHHHHHHHHHHHh--cCC-CcEEEEEEe
Confidence 46899999754331 13457788899988 876 887776643
No 155
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.13 E-value=1.7e-10 Score=99.88 Aligned_cols=107 Identities=17% Similarity=0.115 Sum_probs=81.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccC------------------------
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYA------------------------ 92 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~------------------------ 92 (220)
.++++||||||| +|..++.|+...+ +.+|++||++ +.+++.|++++. +..
T Consensus 45 ~~~~~VLDiGCG-~G~~~~~la~~~~--~~~v~gvDis-~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (292)
T 3g07_A 45 FRGRDVLDLGCN-VGHLTLSIACKWG--PSRMVGLDID-SRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTV 120 (292)
T ss_dssp TTTSEEEEESCT-TCHHHHHHHHHTC--CSEEEEEESC-HHHHHHHHHTC------------------------------
T ss_pred cCCCcEEEeCCC-CCHHHHHHHHHcC--CCEEEEECCC-HHHHHHHHHHHHhhhhhhccccccccccccccccccccccc
Confidence 367899999997 9999999998764 4799999999 999999999876 221
Q ss_pred ---------------------------------CcEEEEEcchhhh----hhhcCCCccEEEEcCCC-------CCccHH
Q 042616 93 ---------------------------------NCIEFVKGDAQKL----LMGDYRGADFVLIDCNI-------DIDGHK 128 (220)
Q Consensus 93 ---------------------------------~~Ve~v~gda~~~----L~~~~~~~D~VfiD~~k-------~~~~y~ 128 (220)
++|+|+++|..+. ++...++||+|+.-.-. ......
T Consensus 121 ~~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~ 200 (292)
T 3g07_A 121 RKRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLK 200 (292)
T ss_dssp ---------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHH
T ss_pred cccccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHH
Confidence 5899999998632 22225789999976632 002456
Q ss_pred HHHHHHHhhcCCCCCCEEEEEecC
Q 042616 129 NVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 129 ~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
.+++.+.+. |+| ||+++...-
T Consensus 201 ~~l~~~~~~--Lkp-GG~lil~~~ 221 (292)
T 3g07_A 201 RMFRRIYRH--LRP-GGILVLEPQ 221 (292)
T ss_dssp HHHHHHHHH--EEE-EEEEEEECC
T ss_pred HHHHHHHHH--hCC-CcEEEEecC
Confidence 789999998 886 888888643
No 156
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.12 E-value=3.4e-10 Score=95.28 Aligned_cols=102 Identities=10% Similarity=-0.009 Sum_probs=80.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc----------ccCCcEEEEEcchhhhhhhc
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG----------RYANCIEFVKGDAQKLLMGD 109 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~----------g~~~~Ve~v~gda~~~L~~~ 109 (220)
+..+||||||| +|..++.||...+ +.+|++||++ +.+++.|+++++ ++ .+++++++|+.+.++..
T Consensus 49 ~~~~vLDiGcG-~G~~~~~la~~~~--~~~v~gvD~s-~~~l~~a~~~~~~~~~~~~~~~~~-~nv~~~~~D~~~~l~~~ 123 (246)
T 2vdv_E 49 KKVTIADIGCG-FGGLMIDLSPAFP--EDLILGMEIR-VQVTNYVEDRIIALRNNTASKHGF-QNINVLRGNAMKFLPNF 123 (246)
T ss_dssp CCEEEEEETCT-TSHHHHHHHHHST--TSEEEEEESC-HHHHHHHHHHHHHHHHTC-CCSTT-TTEEEEECCTTSCGGGT
T ss_pred CCCEEEEEcCC-CCHHHHHHHHhCC--CCCEEEEEcC-HHHHHHHHHHHHHHhhccccccCC-CcEEEEeccHHHHHHHh
Confidence 56789999997 9999999998764 5799999999 999999999875 23 57999999999877643
Q ss_pred --CCCccEEEEcCCCC---------CccHHHHHHHHHhhcCCCCCCEEEEE
Q 042616 110 --YRGADFVLIDCNID---------IDGHKNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 110 --~~~~D~VfiD~~k~---------~~~y~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
.+.+|.|++..+.. ...+..+++.+.+. |+| ||++++
T Consensus 124 ~~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~--Lkp-gG~l~~ 171 (246)
T 2vdv_E 124 FEKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYV--LKE-GGVVYT 171 (246)
T ss_dssp SCTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHH--EEE-EEEEEE
T ss_pred ccccccCEEEEECCCcccccchhHHhhccHHHHHHHHHH--cCC-CCEEEE
Confidence 36799998764430 01236889999998 876 887766
No 157
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.12 E-value=9e-10 Score=92.81 Aligned_cols=113 Identities=11% Similarity=-0.020 Sum_probs=84.4
Q ss_pred HHHHHHHHhhC-CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhh
Q 042616 29 GEFISALAAGN-NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLM 107 (220)
Q Consensus 29 ~~~L~~La~~~-~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~ 107 (220)
..++..+.... ++.+||||||| +|..+..|+.. +.+|++||++ +.+++.|++++. +++++++|+.+..
T Consensus 38 ~~~~~~l~~~~~~~~~vLDiGcG-~G~~~~~l~~~----~~~v~gvD~s-~~~~~~a~~~~~----~~~~~~~d~~~~~- 106 (263)
T 3pfg_A 38 ADLAALVRRHSPKAASLLDVACG-TGMHLRHLADS----FGTVEGLELS-ADMLAIARRRNP----DAVLHHGDMRDFS- 106 (263)
T ss_dssp HHHHHHHHHHCTTCCEEEEETCT-TSHHHHHHTTT----SSEEEEEESC-HHHHHHHHHHCT----TSEEEECCTTTCC-
T ss_pred HHHHHHHHhhCCCCCcEEEeCCc-CCHHHHHHHHc----CCeEEEEECC-HHHHHHHHhhCC----CCEEEECChHHCC-
Confidence 33444444333 45899999997 99999988764 5799999999 999999999863 7899999998843
Q ss_pred hcCCCccEEEEcCC-CC----CccHHHHHHHHHhhcCCCCCCEEEEEecCCCCC
Q 042616 108 GDYRGADFVLIDCN-ID----IDGHKNVFRAAKESVMHGSGAGVIVGYNALPKG 156 (220)
Q Consensus 108 ~~~~~~D~VfiD~~-k~----~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~~~g 156 (220)
. .++||+|+...+ .. ..+...+++.+.+. |+| ||+++++....+.
T Consensus 107 ~-~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~--L~p-gG~l~i~~~~~~~ 156 (263)
T 3pfg_A 107 L-GRRFSAVTCMFSSIGHLAGQAELDAALERFAAH--VLP-DGVVVVEPWWFPE 156 (263)
T ss_dssp C-SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHT--EEE-EEEEEECCCCCTT
T ss_pred c-cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHh--cCC-CcEEEEEeccChh
Confidence 2 578999998762 10 02445778899988 876 9999987544433
No 158
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.12 E-value=4.7e-10 Score=102.93 Aligned_cols=109 Identities=13% Similarity=0.079 Sum_probs=84.4
Q ss_pred ChhHHHHHHHHHh-hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcc
Q 042616 25 EPDVGEFISALAA-GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGD 101 (220)
Q Consensus 25 ~p~~~~~L~~La~-~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gd 101 (220)
.+...+.|...+. ..+.++|||+||| +|..++.||.. +.+|++||.+ +++++.|++|++ ++ + ++|+++|
T Consensus 274 n~~~~e~l~~~~~~~~~~~~VLDlgcG-~G~~sl~la~~----~~~V~gvD~s-~~ai~~A~~n~~~ngl-~-v~~~~~d 345 (425)
T 2jjq_A 274 NSYQAVNLVRKVSELVEGEKILDMYSG-VGTFGIYLAKR----GFNVKGFDSN-EFAIEMARRNVEINNV-D-AEFEVAS 345 (425)
T ss_dssp BHHHHHHHHHHHHHHCCSSEEEEETCT-TTHHHHHHHHT----TCEEEEEESC-HHHHHHHHHHHHHHTC-C-EEEEECC
T ss_pred CHHHHHHHHHHhhccCCCCEEEEeecc-chHHHHHHHHc----CCEEEEEECC-HHHHHHHHHHHHHcCC-c-EEEEECC
Confidence 4555555444433 5667899999997 99999999874 5799999999 999999999997 66 4 9999999
Q ss_pred hhhhhhhcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEE
Q 042616 102 AQKLLMGDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 102 a~~~L~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
+.+.++. .||+|++|.+. .+....+++.+.. |+| ||++++
T Consensus 346 ~~~~~~~---~fD~Vv~dPPr-~g~~~~~~~~l~~---l~p-~givyv 385 (425)
T 2jjq_A 346 DREVSVK---GFDTVIVDPPR-AGLHPRLVKRLNR---EKP-GVIVYV 385 (425)
T ss_dssp TTTCCCT---TCSEEEECCCT-TCSCHHHHHHHHH---HCC-SEEEEE
T ss_pred hHHcCcc---CCCEEEEcCCc-cchHHHHHHHHHh---cCC-CcEEEE
Confidence 9997643 89999999987 2333457777765 456 666555
No 159
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.12 E-value=2.9e-09 Score=86.40 Aligned_cols=114 Identities=12% Similarity=0.105 Sum_probs=87.7
Q ss_pred CCCCChhHHHHHHHHHh---hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcE
Q 042616 21 KRGKEPDVGEFISALAA---GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCI 95 (220)
Q Consensus 21 ~~~~~p~~~~~L~~La~---~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~V 95 (220)
+....+..++.+..++. ..+.++|||+||| +|..++.++.. . .++|+++|.+ +.+++.|+++++ ++ ++
T Consensus 27 ~~~~~~~~~~~l~~~~~~~~~~~~~~vlD~g~G-~G~~~~~l~~~-~--~~~v~~vD~~-~~~~~~a~~~~~~~~~--~~ 99 (207)
T 1wy7_A 27 QYRTPGNAASELLWLAYSLGDIEGKVVADLGAG-TGVLSYGALLL-G--AKEVICVEVD-KEAVDVLIENLGEFKG--KF 99 (207)
T ss_dssp CCCCCHHHHHHHHHHHHHTTSSTTCEEEEETCT-TCHHHHHHHHT-T--CSEEEEEESC-HHHHHHHHHHTGGGTT--SE
T ss_pred eecCchHHHHHHHHHHHHcCCCCcCEEEEeeCC-CCHHHHHHHHc-C--CCEEEEEECC-HHHHHHHHHHHHHcCC--CE
Confidence 34566777777666655 3457899999997 99999998875 1 3589999999 999999999997 44 79
Q ss_pred EEEEcchhhhhhhcCCCccEEEEcCCCC---CccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 96 EFVKGDAQKLLMGDYRGADFVLIDCNID---IDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 96 e~v~gda~~~L~~~~~~~D~VfiD~~k~---~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
+++++|+.++ + .+||+|++|.+-. ......+++.+.+. + |++++..
T Consensus 100 ~~~~~d~~~~-~---~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~--l---~~~~~~~ 148 (207)
T 1wy7_A 100 KVFIGDVSEF-N---SRVDIVIMNPPFGSQRKHADRPFLLKAFEI--S---DVVYSIH 148 (207)
T ss_dssp EEEESCGGGC-C---CCCSEEEECCCCSSSSTTTTHHHHHHHHHH--C---SEEEEEE
T ss_pred EEEECchHHc-C---CCCCEEEEcCCCccccCCchHHHHHHHHHh--c---CcEEEEE
Confidence 9999999883 3 4899999998731 13446788888887 4 6666554
No 160
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.11 E-value=2.9e-10 Score=101.27 Aligned_cols=104 Identities=13% Similarity=0.090 Sum_probs=82.9
Q ss_pred hhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhcCCCcc
Q 042616 37 AGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGDYRGAD 114 (220)
Q Consensus 37 ~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~~~~~D 114 (220)
...+.++|||+||| +|..++.++.+ + ..+|++||.+ + +++.|+++++ ++.++|+++++|+.+. +...++||
T Consensus 63 ~~~~~~~VLDvGcG-~G~~~~~la~~-g--~~~v~gvD~s-~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD 135 (349)
T 3q7e_A 63 HLFKDKVVLDVGSG-TGILCMFAAKA-G--ARKVIGIECS-S-ISDYAVKIVKANKLDHVVTIIKGKVEEV-ELPVEKVD 135 (349)
T ss_dssp HHHTTCEEEEESCT-TSHHHHHHHHT-T--CSEEEEEECS-T-HHHHHHHHHHHTTCTTTEEEEESCTTTC-CCSSSCEE
T ss_pred ccCCCCEEEEEecc-chHHHHHHHHC-C--CCEEEEECcH-H-HHHHHHHHHHHcCCCCcEEEEECcHHHc-cCCCCceE
Confidence 45678999999997 99999999986 1 4699999999 7 9999999987 7777899999999886 22147899
Q ss_pred EEEEcCC----CCCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 115 FVLIDCN----IDIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 115 ~VfiD~~----k~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
+|+.+.- ........+++.+.+. |+| ||+++.+
T Consensus 136 ~Iis~~~~~~l~~~~~~~~~l~~~~r~--Lkp-gG~li~~ 172 (349)
T 3q7e_A 136 IIISEWMGYCLFYESMLNTVLHARDKW--LAP-DGLIFPD 172 (349)
T ss_dssp EEEECCCBBTBTBTCCHHHHHHHHHHH--EEE-EEEEESC
T ss_pred EEEEccccccccCchhHHHHHHHHHHh--CCC-CCEEccc
Confidence 9998652 1114667788888888 876 9988744
No 161
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.11 E-value=3.9e-10 Score=94.32 Aligned_cols=103 Identities=12% Similarity=0.125 Sum_probs=81.3
Q ss_pred hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccEEE
Q 042616 38 GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFVL 117 (220)
Q Consensus 38 ~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~Vf 117 (220)
..++.+|||+||| +|..+..|+.. +.+|+++|++ +.+++.|++++.+...+++++++|+.+. +...++||+|+
T Consensus 37 ~~~~~~vLDiG~G-~G~~~~~l~~~----~~~v~~vD~s-~~~~~~a~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~v~ 109 (263)
T 2yqz_A 37 KGEEPVFLELGVG-TGRIALPLIAR----GYRYIALDAD-AAMLEVFRQKIAGVDRKVQVVQADARAI-PLPDESVHGVI 109 (263)
T ss_dssp SSSCCEEEEETCT-TSTTHHHHHTT----TCEEEEEESC-HHHHHHHHHHTTTSCTTEEEEESCTTSC-CSCTTCEEEEE
T ss_pred CCCCCEEEEeCCc-CCHHHHHHHHC----CCEEEEEECC-HHHHHHHHHHhhccCCceEEEEcccccC-CCCCCCeeEEE
Confidence 3567899999997 99999988864 6799999999 9999999999853336799999999763 32246899999
Q ss_pred EcCCCC-CccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 118 IDCNID-IDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 118 iD~~k~-~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
...... -.+....++.+.+. |+| ||.+++.
T Consensus 110 ~~~~l~~~~~~~~~l~~~~~~--L~p-gG~l~~~ 140 (263)
T 2yqz_A 110 VVHLWHLVPDWPKVLAEAIRV--LKP-GGALLEG 140 (263)
T ss_dssp EESCGGGCTTHHHHHHHHHHH--EEE-EEEEEEE
T ss_pred ECCchhhcCCHHHHHHHHHHH--CCC-CcEEEEE
Confidence 875431 13567889999998 886 7877664
No 162
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.11 E-value=3e-10 Score=102.84 Aligned_cols=120 Identities=17% Similarity=0.163 Sum_probs=91.2
Q ss_pred CChhHHHHHHHHHhhC-----CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEE
Q 042616 24 KEPDVGEFISALAAGN-----NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFV 98 (220)
Q Consensus 24 ~~p~~~~~L~~La~~~-----~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v 98 (220)
..+....++..+.... +..+|||+||| +|..++.|+.. +.+|++||.+ +.+++.|+++++...-.++++
T Consensus 212 ~d~~t~~ll~~l~~~l~~~~~~~~~VLDlGcG-~G~~~~~la~~----g~~V~gvDis-~~al~~A~~n~~~~~~~v~~~ 285 (381)
T 3dmg_A 212 VDPASLLLLEALQERLGPEGVRGRQVLDLGAG-YGALTLPLARM----GAEVVGVEDD-LASVLSLQKGLEANALKAQAL 285 (381)
T ss_dssp CCHHHHHHHHHHHHHHCTTTTTTCEEEEETCT-TSTTHHHHHHT----TCEEEEEESB-HHHHHHHHHHHHHTTCCCEEE
T ss_pred CCHHHHHHHHHHHHhhcccCCCCCEEEEEeee-CCHHHHHHHHc----CCEEEEEECC-HHHHHHHHHHHHHcCCCeEEE
Confidence 4566666777776542 56899999997 99999999874 5799999999 999999999997222249999
Q ss_pred EcchhhhhhhcCCCccEEEEcCCCCC------ccHHHHHHHHHhhcCCCCCCEEEEE-ecCC
Q 042616 99 KGDAQKLLMGDYRGADFVLIDCNIDI------DGHKNVFRAAKESVMHGSGAGVIVG-YNAL 153 (220)
Q Consensus 99 ~gda~~~L~~~~~~~D~VfiD~~k~~------~~y~~~l~~l~~~~~L~~~Ggviv~-dNv~ 153 (220)
++|+.+..+. .++||+|+.+.+-.. .....+++.+.+. |+| ||.+++ .|-.
T Consensus 286 ~~D~~~~~~~-~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~--Lkp-GG~l~iv~n~~ 343 (381)
T 3dmg_A 286 HSDVDEALTE-EARFDIIVTNPPFHVGGAVILDVAQAFVNVAAAR--LRP-GGVFFLVSNPF 343 (381)
T ss_dssp ECSTTTTSCT-TCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHH--EEE-EEEEEEEECTT
T ss_pred Ecchhhcccc-CCCeEEEEECCchhhcccccHHHHHHHHHHHHHh--cCc-CcEEEEEEcCC
Confidence 9999887643 468999999865421 3456788999998 887 665544 4443
No 163
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.11 E-value=6.8e-10 Score=90.37 Aligned_cols=108 Identities=13% Similarity=0.052 Sum_probs=83.4
Q ss_pred HHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhh--
Q 042616 30 EFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLM-- 107 (220)
Q Consensus 30 ~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~-- 107 (220)
.++..+ ...++.+||||||| +|..+..|+.. +.+|+++|++ +.+++.|+++ .+++++++|+.+...
T Consensus 43 ~~~~~~-~~~~~~~vLdiG~G-~G~~~~~l~~~----~~~v~~vD~s-~~~~~~a~~~-----~~~~~~~~~~~~~~~~~ 110 (227)
T 3e8s_A 43 AILLAI-LGRQPERVLDLGCG-EGWLLRALADR----GIEAVGVDGD-RTLVDAARAA-----GAGEVHLASYAQLAEAK 110 (227)
T ss_dssp HHHHHH-HHTCCSEEEEETCT-TCHHHHHHHTT----TCEEEEEESC-HHHHHHHHHT-----CSSCEEECCHHHHHTTC
T ss_pred HHHHHh-hcCCCCEEEEeCCC-CCHHHHHHHHC----CCEEEEEcCC-HHHHHHHHHh-----cccccchhhHHhhcccc
Confidence 344444 55667999999997 99999988874 6799999999 9999999987 467889999988621
Q ss_pred hc-CCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 108 GD-YRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 108 ~~-~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
.. ..+||+|+........+...+++.+.+. |+| ||.+++...
T Consensus 111 ~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~--L~p-gG~l~~~~~ 153 (227)
T 3e8s_A 111 VPVGKDYDLICANFALLHQDIIELLSAMRTL--LVP-GGALVIQTL 153 (227)
T ss_dssp SCCCCCEEEEEEESCCCSSCCHHHHHHHHHT--EEE-EEEEEEEEC
T ss_pred cccCCCccEEEECchhhhhhHHHHHHHHHHH--hCC-CeEEEEEec
Confidence 11 2459999987654235678899999998 876 888777544
No 164
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.10 E-value=4.9e-10 Score=100.53 Aligned_cols=97 Identities=13% Similarity=0.061 Sum_probs=78.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhh-cCCCccEE
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMG-DYRGADFV 116 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~-~~~~~D~V 116 (220)
++++|||+| | +|..++.++...+ .++|+++|.+ +.+++.|+++++ ++. +|+++++|+.+.+|. ..++||+|
T Consensus 172 ~~~~VLDlG-G-~G~~~~~la~~~~--~~~v~~vDi~-~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~l~~~~~~~fD~V 245 (373)
T 2qm3_A 172 ENKDIFVLG-D-DDLTSIALMLSGL--PKRIAVLDID-ERLTKFIEKAANEIGYE-DIEIFTFDLRKPLPDYALHKFDTF 245 (373)
T ss_dssp TTCEEEEES-C-TTCHHHHHHHHTC--CSEEEEECSC-HHHHHHHHHHHHHHTCC-CEEEECCCTTSCCCTTTSSCBSEE
T ss_pred CCCEEEEEC-C-CCHHHHHHHHhCC--CCEEEEEECC-HHHHHHHHHHHHHcCCC-CEEEEEChhhhhchhhccCCccEE
Confidence 578999999 8 9999999987532 4799999999 999999999997 664 899999999886653 34689999
Q ss_pred EEcCCCCCccHHHHHHHHHhhcCCCCCCE
Q 042616 117 LIDCNIDIDGHKNVFRAAKESVMHGSGAG 145 (220)
Q Consensus 117 fiD~~k~~~~y~~~l~~l~~~~~L~~~Gg 145 (220)
|+|.+........+++.+.+. |+| ||
T Consensus 246 i~~~p~~~~~~~~~l~~~~~~--Lkp-gG 271 (373)
T 2qm3_A 246 ITDPPETLEAIRAFVGRGIAT--LKG-PR 271 (373)
T ss_dssp EECCCSSHHHHHHHHHHHHHT--BCS-TT
T ss_pred EECCCCchHHHHHHHHHHHHH--ccc-CC
Confidence 999865112246778888888 876 77
No 165
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.10 E-value=6.8e-10 Score=91.86 Aligned_cols=101 Identities=14% Similarity=0.031 Sum_probs=80.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccEEEE
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFVLI 118 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~Vfi 118 (220)
.+..+||||||| +|..+..|+.. +.+|++||++ +.+++.|+++... .+++++++|+.+. +...++||+|+.
T Consensus 52 ~~~~~vLDiG~G-~G~~~~~l~~~----~~~v~~vD~s-~~~~~~a~~~~~~--~~~~~~~~d~~~~-~~~~~~fD~v~~ 122 (242)
T 3l8d_A 52 KKEAEVLDVGCG-DGYGTYKLSRT----GYKAVGVDIS-EVMIQKGKERGEG--PDLSFIKGDLSSL-PFENEQFEAIMA 122 (242)
T ss_dssp CTTCEEEEETCT-TSHHHHHHHHT----TCEEEEEESC-HHHHHHHHTTTCB--TTEEEEECBTTBC-SSCTTCEEEEEE
T ss_pred CCCCeEEEEcCC-CCHHHHHHHHc----CCeEEEEECC-HHHHHHHHhhccc--CCceEEEcchhcC-CCCCCCccEEEE
Confidence 357899999997 99999999875 6799999999 9999999988633 5799999999874 322578999997
Q ss_pred cCCC-CCccHHHHHHHHHhhcCCCCCCEEEEEec
Q 042616 119 DCNI-DIDGHKNVFRAAKESVMHGSGAGVIVGYN 151 (220)
Q Consensus 119 D~~k-~~~~y~~~l~~l~~~~~L~~~Ggviv~dN 151 (220)
.... .-.+....++.+.+. |+| ||++++..
T Consensus 123 ~~~l~~~~~~~~~l~~~~~~--L~p-gG~l~i~~ 153 (242)
T 3l8d_A 123 INSLEWTEEPLRALNEIKRV--LKS-DGYACIAI 153 (242)
T ss_dssp ESCTTSSSCHHHHHHHHHHH--EEE-EEEEEEEE
T ss_pred cChHhhccCHHHHHHHHHHH--hCC-CeEEEEEE
Confidence 6644 124667889999999 886 77766654
No 166
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.10 E-value=6.2e-10 Score=101.97 Aligned_cols=99 Identities=13% Similarity=0.114 Sum_probs=80.4
Q ss_pred hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhc---CCC
Q 042616 38 GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGD---YRG 112 (220)
Q Consensus 38 ~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~---~~~ 112 (220)
..+..+|||+||| +|..++.||.. +++|++||.+ +++++.|++|++ ++ ++++|+++|+.+.++.+ .++
T Consensus 284 ~~~~~~VLDlgcG-~G~~~~~la~~----~~~V~gvD~s-~~al~~A~~n~~~~~~-~~v~f~~~d~~~~l~~~~~~~~~ 356 (433)
T 1uwv_A 284 VQPEDRVLDLFCG-MGNFTLPLATQ----AASVVGVEGV-PALVEKGQQNARLNGL-QNVTFYHENLEEDVTKQPWAKNG 356 (433)
T ss_dssp CCTTCEEEEESCT-TTTTHHHHHTT----SSEEEEEESC-HHHHHHHHHHHHHTTC-CSEEEEECCTTSCCSSSGGGTTC
T ss_pred CCCCCEEEECCCC-CCHHHHHHHhh----CCEEEEEeCC-HHHHHHHHHHHHHcCC-CceEEEECCHHHHhhhhhhhcCC
Confidence 3456899999997 99999999874 6899999999 999999999997 55 48999999999866432 357
Q ss_pred ccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEE
Q 042616 113 ADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 113 ~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
||+|++|.+. ....+.++.+.+. .| ++++.+
T Consensus 357 fD~Vv~dPPr--~g~~~~~~~l~~~---~p-~~ivyv 387 (433)
T 1uwv_A 357 FDKVLLDPAR--AGAAGVMQQIIKL---EP-IRIVYV 387 (433)
T ss_dssp CSEEEECCCT--TCCHHHHHHHHHH---CC-SEEEEE
T ss_pred CCEEEECCCC--ccHHHHHHHHHhc---CC-CeEEEE
Confidence 9999999998 5556788888775 35 666543
No 167
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.09 E-value=3.6e-10 Score=91.56 Aligned_cols=119 Identities=14% Similarity=0.085 Sum_probs=88.5
Q ss_pred ChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhh
Q 042616 25 EPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQK 104 (220)
Q Consensus 25 ~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~ 104 (220)
.+...+++..+....++.+|||+||| +|..++.++.. . +.+|+++|.+ +.+++.|++++.....+++++++|+.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~vLDiGcG-~G~~~~~~~~~--~-~~~v~~vD~s-~~~~~~a~~~~~~~~~~~~~~~~d~~~ 82 (209)
T 2p8j_A 8 QPQLYRFLKYCNESNLDKTVLDCGAG-GDLPPLSIFVE--D-GYKTYGIEIS-DLQLKKAENFSRENNFKLNISKGDIRK 82 (209)
T ss_dssp CTHHHHHHHHHHHSSSCSEEEEESCC-SSSCTHHHHHH--T-TCEEEEEECC-HHHHHHHHHHHHHHTCCCCEEECCTTS
T ss_pred hhhHHHHHHHHhccCCCCEEEEECCC-CCHHHHHHHHh--C-CCEEEEEECC-HHHHHHHHHHHHhcCCceEEEECchhh
Confidence 44566778777777788999999997 89875544432 2 6799999999 999999999987322579999999987
Q ss_pred hhhhcCCCccEEEEcCCCC---CccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 105 LLMGDYRGADFVLIDCNID---IDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 105 ~L~~~~~~~D~VfiD~~k~---~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
. +...++||+|+....-. ..+....++.+.+. |+| ||.+++...
T Consensus 83 ~-~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~--Lkp-gG~l~~~~~ 129 (209)
T 2p8j_A 83 L-PFKDESMSFVYSYGTIFHMRKNDVKEAIDEIKRV--LKP-GGLACINFL 129 (209)
T ss_dssp C-CSCTTCEEEEEECSCGGGSCHHHHHHHHHHHHHH--EEE-EEEEEEEEE
T ss_pred C-CCCCCceeEEEEcChHHhCCHHHHHHHHHHHHHH--cCC-CcEEEEEEe
Confidence 3 32246899999764321 13557788999998 886 888777643
No 168
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.09 E-value=3e-10 Score=92.88 Aligned_cols=111 Identities=13% Similarity=0.046 Sum_probs=84.7
Q ss_pred hhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhh
Q 042616 26 PDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKL 105 (220)
Q Consensus 26 p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~ 105 (220)
....+++..+. ..++.+|||+||| +|..+..|+.. +.+++++|++ +.+++.|++++. .+++++++|+.+.
T Consensus 32 ~~~~~~l~~~~-~~~~~~vLDiGcG-~G~~~~~l~~~----~~~v~~vD~s-~~~~~~a~~~~~---~~~~~~~~d~~~~ 101 (220)
T 3hnr_A 32 AHYEDILEDVV-NKSFGNVLEFGVG-TGNLTNKLLLA----GRTVYGIEPS-REMRMIAKEKLP---KEFSITEGDFLSF 101 (220)
T ss_dssp TTHHHHHHHHH-HTCCSEEEEECCT-TSHHHHHHHHT----TCEEEEECSC-HHHHHHHHHHSC---TTCCEESCCSSSC
T ss_pred HHHHHHHHHhh-ccCCCeEEEeCCC-CCHHHHHHHhC----CCeEEEEeCC-HHHHHHHHHhCC---CceEEEeCChhhc
Confidence 34456666664 4477899999997 99999999874 6799999999 999999999875 5799999999885
Q ss_pred hhhcCCCccEEEEcCCCCC-ccHH--HHHHHHHhhcCCCCCCEEEEEec
Q 042616 106 LMGDYRGADFVLIDCNIDI-DGHK--NVFRAAKESVMHGSGAGVIVGYN 151 (220)
Q Consensus 106 L~~~~~~~D~VfiD~~k~~-~~y~--~~l~~l~~~~~L~~~Ggviv~dN 151 (220)
. . .++||+|+....... .+.. ..++.+.+. |+| ||.+++.+
T Consensus 102 ~-~-~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~--Lkp-gG~l~i~~ 145 (220)
T 3hnr_A 102 E-V-PTSIDTIVSTYAFHHLTDDEKNVAIAKYSQL--LNK-GGKIVFAD 145 (220)
T ss_dssp C-C-CSCCSEEEEESCGGGSCHHHHHHHHHHHHHH--SCT-TCEEEEEE
T ss_pred C-C-CCCeEEEEECcchhcCChHHHHHHHHHHHHh--cCC-CCEEEEEe
Confidence 3 3 278999998865411 1222 388999998 887 66655543
No 169
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.09 E-value=8.1e-10 Score=90.40 Aligned_cols=102 Identities=18% Similarity=0.173 Sum_probs=79.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccEEEEc
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFVLID 119 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~VfiD 119 (220)
+..+|||+||| +|..+..|+.. +.+++++|.+ +.+++.|++++.....+++++++|+.+. +...++||+|+..
T Consensus 38 ~~~~vLDlG~G-~G~~~~~l~~~----~~~v~~vD~s-~~~~~~a~~~~~~~~~~~~~~~~d~~~~-~~~~~~~D~v~~~ 110 (227)
T 1ve3_A 38 KRGKVLDLACG-VGGFSFLLEDY----GFEVVGVDIS-EDMIRKAREYAKSRESNVEFIVGDARKL-SFEDKTFDYVIFI 110 (227)
T ss_dssp SCCEEEEETCT-TSHHHHHHHHT----TCEEEEEESC-HHHHHHHHHHHHHTTCCCEEEECCTTSC-CSCTTCEEEEEEE
T ss_pred CCCeEEEEecc-CCHHHHHHHHc----CCEEEEEECC-HHHHHHHHHHHHhcCCCceEEECchhcC-CCCCCcEEEEEEc
Confidence 46899999997 99999988875 3499999999 9999999999873336799999998873 2213689999987
Q ss_pred CC--C-CCccHHHHHHHHHhhcCCCCCCEEEEEec
Q 042616 120 CN--I-DIDGHKNVFRAAKESVMHGSGAGVIVGYN 151 (220)
Q Consensus 120 ~~--k-~~~~y~~~l~~l~~~~~L~~~Ggviv~dN 151 (220)
.. . ...+....++.+.+. |+| ||.+++..
T Consensus 111 ~~~~~~~~~~~~~~l~~~~~~--L~~-gG~l~~~~ 142 (227)
T 1ve3_A 111 DSIVHFEPLELNQVFKEVRRV--LKP-SGKFIMYF 142 (227)
T ss_dssp SCGGGCCHHHHHHHHHHHHHH--EEE-EEEEEEEE
T ss_pred CchHhCCHHHHHHHHHHHHHH--cCC-CcEEEEEe
Confidence 65 3 113456788999998 876 77776653
No 170
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.09 E-value=1.5e-09 Score=99.59 Aligned_cols=157 Identities=13% Similarity=0.062 Sum_probs=104.9
Q ss_pred HHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHh-------c--cc-CCcEEEEEcchhh
Q 042616 35 LAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSL-------G--RY-ANCIEFVKGDAQK 104 (220)
Q Consensus 35 La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l-------~--g~-~~~Ve~v~gda~~ 104 (220)
.+...+..+||||||| +|..++.+|...+ ..+|++||.+ +.+++.|+++. + ++ .++|+|++||+.+
T Consensus 168 ~l~l~~gd~VLDLGCG-tG~l~l~lA~~~g--~~kVvGIDiS-~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~ 243 (438)
T 3uwp_A 168 EIKMTDDDLFVDLGSG-VGQVVLQVAAATN--CKHHYGVEKA-DIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLS 243 (438)
T ss_dssp HHCCCTTCEEEEESCT-TSHHHHHHHHHCC--CSEEEEEECC-HHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTS
T ss_pred hcCCCCCCEEEEeCCC-CCHHHHHHHHHCC--CCEEEEEeCC-HHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccC
Confidence 3356677899999997 9999999887542 4579999999 99999999864 2 44 3689999999977
Q ss_pred hhhh-cCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCCCCCCcc-ceEEEeeecCCcEEEEEEeecCC
Q 042616 105 LLMG-DYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNALPKGSWR-GYKTHFLPIGEGLLVTRIGENSD 182 (220)
Q Consensus 105 ~L~~-~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~~~g~~~-~~~s~~lPig~Gl~v~~~~~~~~ 182 (220)
.--. ....+|+||+....-..+....|..+.+. |+| ||.||+-+.+.+..|+ ..+ .+-++++=+.+.....-.+
T Consensus 244 lp~~d~~~~aDVVf~Nn~~F~pdl~~aL~Ei~Rv--LKP-GGrIVssE~f~p~d~~i~~r-nl~di~~il~v~el~~~~~ 319 (438)
T 3uwp_A 244 EEWRERIANTSVIFVNNFAFGPEVDHQLKERFAN--MKE-GGRIVSSKPFAPLNFRINSR-NLSDIGTIMRVVELSPLKG 319 (438)
T ss_dssp HHHHHHHHTCSEEEECCTTCCHHHHHHHHHHHTT--SCT-TCEEEESSCSSCTTCCCCSS-STTSGGGSEEEEECCCCTT
T ss_pred CccccccCCccEEEEcccccCchHHHHHHHHHHc--CCC-CcEEEEeecccCCCCCCCcc-cccChhhhheeeeccCCCC
Confidence 4211 12479999987643114556667777777 876 9999988888766554 111 2234555455544442222
Q ss_pred -CC-CCCcCcCceEecccC
Q 042616 183 -VG-GGRKRSRWVVTVDKC 199 (220)
Q Consensus 183 -~~-~~~~~~~w~~~~d~~ 199 (220)
++ ....-+-+|-.||.-
T Consensus 320 sVSWT~~~g~yyi~tvdr~ 338 (438)
T 3uwp_A 320 SVSWTGKPVSYYLHTIDRT 338 (438)
T ss_dssp CCCTTSSCCCCEEEEECTH
T ss_pred ceeeccCCccEEEEEechH
Confidence 22 234456667776653
No 171
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.09 E-value=2.5e-10 Score=95.60 Aligned_cols=102 Identities=9% Similarity=0.042 Sum_probs=81.7
Q ss_pred hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccEEE
Q 042616 38 GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFVL 117 (220)
Q Consensus 38 ~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~Vf 117 (220)
..++.+|||+||| +|..+..|+... ..+|+++|++ +.+++.|++++. ..+++++++|+.+. +...++||+|+
T Consensus 42 ~~~~~~vLD~GcG-~G~~~~~l~~~~---~~~v~~vD~s-~~~~~~a~~~~~--~~~~~~~~~d~~~~-~~~~~~fD~v~ 113 (253)
T 3g5l_A 42 DFNQKTVLDLGCG-FGWHCIYAAEHG---AKKVLGIDLS-ERMLTEAKRKTT--SPVVCYEQKAIEDI-AIEPDAYNVVL 113 (253)
T ss_dssp CCTTCEEEEETCT-TCHHHHHHHHTT---CSEEEEEESC-HHHHHHHHHHCC--CTTEEEEECCGGGC-CCCTTCEEEEE
T ss_pred ccCCCEEEEECCC-CCHHHHHHHHcC---CCEEEEEECC-HHHHHHHHHhhc--cCCeEEEEcchhhC-CCCCCCeEEEE
Confidence 3467899999997 999999998752 2399999999 999999999887 36799999999763 33247899999
Q ss_pred EcCCC-CCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 118 IDCNI-DIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 118 iD~~k-~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
..... ...+....++.+.+. |+| ||.+++.
T Consensus 114 ~~~~l~~~~~~~~~l~~~~~~--Lkp-gG~l~~~ 144 (253)
T 3g5l_A 114 SSLALHYIASFDDICKKVYIN--LKS-SGSFIFS 144 (253)
T ss_dssp EESCGGGCSCHHHHHHHHHHH--EEE-EEEEEEE
T ss_pred EchhhhhhhhHHHHHHHHHHH--cCC-CcEEEEE
Confidence 87643 114678899999998 886 8887775
No 172
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.09 E-value=4.7e-10 Score=99.64 Aligned_cols=107 Identities=9% Similarity=0.069 Sum_probs=81.9
Q ss_pred HHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhc
Q 042616 32 ISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGD 109 (220)
Q Consensus 32 L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~ 109 (220)
|.......+.++||||||| +|..++.++++ . ..+|++||.+ + +++.|+++++ ++.++|+++++|+.+. +.-
T Consensus 56 i~~~~~~~~~~~VLDiGcG-tG~ls~~la~~-g--~~~v~gvD~s-~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~ 128 (340)
T 2fyt_A 56 IYQNPHIFKDKVVLDVGCG-TGILSMFAAKA-G--AKKVLGVDQS-E-ILYQAMDIIRLNKLEDTITLIKGKIEEV-HLP 128 (340)
T ss_dssp HHHCGGGTTTCEEEEETCT-TSHHHHHHHHT-T--CSEEEEEESS-T-HHHHHHHHHHHTTCTTTEEEEESCTTTS-CCS
T ss_pred HHhhhhhcCCCEEEEeecc-CcHHHHHHHHc-C--CCEEEEEChH-H-HHHHHHHHHHHcCCCCcEEEEEeeHHHh-cCC
Confidence 3333345678999999997 99999988875 1 4699999999 7 8999999987 6668899999999874 221
Q ss_pred CCCccEEEEcCC---C-CCccHHHHHHHHHhhcCCCCCCEEEE
Q 042616 110 YRGADFVLIDCN---I-DIDGHKNVFRAAKESVMHGSGAGVIV 148 (220)
Q Consensus 110 ~~~~D~VfiD~~---k-~~~~y~~~l~~l~~~~~L~~~Ggviv 148 (220)
.++||+|+.+.- . .......+++.+.+. |+| ||+++
T Consensus 129 ~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~--Lkp-gG~li 168 (340)
T 2fyt_A 129 VEKVDVIISEWMGYFLLFESMLDSVLYAKNKY--LAK-GGSVY 168 (340)
T ss_dssp CSCEEEEEECCCBTTBTTTCHHHHHHHHHHHH--EEE-EEEEE
T ss_pred CCcEEEEEEcCchhhccCHHHHHHHHHHHHhh--cCC-CcEEE
Confidence 368999998761 1 113456678888888 876 88887
No 173
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.09 E-value=4.8e-10 Score=92.70 Aligned_cols=110 Identities=12% Similarity=0.020 Sum_probs=85.1
Q ss_pred HHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc
Q 042616 30 EFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD 109 (220)
Q Consensus 30 ~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~ 109 (220)
+.+..++...+..+||||||| +|..+..|+.. . ..+++++|++ +.+++.|++++.. .+++++++|+.+. +..
T Consensus 33 ~~l~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~-~--~~~v~~vD~s-~~~~~~a~~~~~~--~~~~~~~~d~~~~-~~~ 104 (243)
T 3bkw_A 33 PALRAMLPEVGGLRIVDLGCG-FGWFCRWAHEH-G--ASYVLGLDLS-EKMLARARAAGPD--TGITYERADLDKL-HLP 104 (243)
T ss_dssp HHHHHHSCCCTTCEEEEETCT-TCHHHHHHHHT-T--CSEEEEEESC-HHHHHHHHHTSCS--SSEEEEECCGGGC-CCC
T ss_pred HHHHHhccccCCCEEEEEcCc-CCHHHHHHHHC-C--CCeEEEEcCC-HHHHHHHHHhccc--CCceEEEcChhhc-cCC
Confidence 355555566678999999997 99999988875 1 2399999999 9999999998753 3699999999874 322
Q ss_pred CCCccEEEEcCCC-CCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 110 YRGADFVLIDCNI-DIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 110 ~~~~D~VfiD~~k-~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
.++||+|+..... ...+....++.+.+. |+| ||.+++.
T Consensus 105 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~--L~p-gG~l~~~ 143 (243)
T 3bkw_A 105 QDSFDLAYSSLALHYVEDVARLFRTVHQA--LSP-GGHFVFS 143 (243)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHH--EEE-EEEEEEE
T ss_pred CCCceEEEEeccccccchHHHHHHHHHHh--cCc-CcEEEEE
Confidence 4689999987543 114568889999998 876 8877764
No 174
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.08 E-value=5.2e-10 Score=102.23 Aligned_cols=122 Identities=14% Similarity=0.098 Sum_probs=95.5
Q ss_pred CCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEc
Q 042616 23 GKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKG 100 (220)
Q Consensus 23 ~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~g 100 (220)
.+....++++..++...+..+|||+||| +|..|+.|+...+ +++|+++|.+ +.+++.++++++ ++ +++++++
T Consensus 229 ~~qd~~s~~~~~~l~~~~g~~VLDlgaG-~G~~t~~la~~~~--~~~v~a~D~~-~~~l~~~~~~~~~~g~--~~~~~~~ 302 (429)
T 1sqg_A 229 TVQDASAQGCMTWLAPQNGEHILDLCAA-PGGKTTHILEVAP--EAQVVAVDID-EQRLSRVYDNLKRLGM--KATVKQG 302 (429)
T ss_dssp EECCHHHHTHHHHHCCCTTCEEEEESCT-TCHHHHHHHHHCT--TCEEEEEESS-TTTHHHHHHHHHHTTC--CCEEEEC
T ss_pred EeeCHHHHHHHHHcCCCCcCeEEEECCC-chHHHHHHHHHcC--CCEEEEECCC-HHHHHHHHHHHHHcCC--CeEEEeC
Confidence 3556677888888888888999999996 9999999998765 4899999999 999999999997 54 4899999
Q ss_pred chhhhhhhc-CCCccEEEEcCCCCC-------cc----------------HHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 101 DAQKLLMGD-YRGADFVLIDCNIDI-------DG----------------HKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 101 da~~~L~~~-~~~~D~VfiD~~k~~-------~~----------------y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
|+.+..+.. .+.||+|++|++-.. .+ +..+++.+.+. |+| ||.+|.-...
T Consensus 303 D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~--Lkp-GG~lvystcs 376 (429)
T 1sqg_A 303 DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPH--LKT-GGTLVYATCS 376 (429)
T ss_dssp CTTCTHHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGG--EEE-EEEEEEEESC
T ss_pred chhhchhhcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHh--cCC-CCEEEEEECC
Confidence 998764322 257999999986411 00 14678888888 876 8888776544
No 175
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.07 E-value=5.6e-10 Score=92.27 Aligned_cols=108 Identities=14% Similarity=0.089 Sum_probs=81.1
Q ss_pred HHHHHHhh-CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc
Q 042616 31 FISALAAG-NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD 109 (220)
Q Consensus 31 ~L~~La~~-~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~ 109 (220)
++..+... .+..+|||+||| +|..+..|+.. .+++++|++ +.+++.|++++.....+++++++|+.+.. .
T Consensus 23 ~~~~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~-----~~v~~vD~s-~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~- 93 (243)
T 3d2l_A 23 WVAWVLEQVEPGKRIADIGCG-TGTATLLLADH-----YEVTGVDLS-EEMLEIAQEKAMETNRHVDFWVQDMRELE-L- 93 (243)
T ss_dssp HHHHHHHHSCTTCEEEEESCT-TCHHHHHHTTT-----SEEEEEESC-HHHHHHHHHHHHHTTCCCEEEECCGGGCC-C-
T ss_pred HHHHHHHHcCCCCeEEEecCC-CCHHHHHHhhC-----CeEEEEECC-HHHHHHHHHhhhhcCCceEEEEcChhhcC-C-
Confidence 33333333 345899999997 89998887763 699999999 99999999998733357999999998743 2
Q ss_pred CCCccEEEEcCCC-----CCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 110 YRGADFVLIDCNI-----DIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 110 ~~~~D~VfiD~~k-----~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
.++||+|++..+. +..+....++.+.+. |+| ||.++++
T Consensus 94 ~~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~--L~p-gG~l~~~ 136 (243)
T 3d2l_A 94 PEPVDAITILCDSLNYLQTEADVKQTFDSAARL--LTD-GGKLLFD 136 (243)
T ss_dssp SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHH--EEE-EEEEEEE
T ss_pred CCCcCEEEEeCCchhhcCCHHHHHHHHHHHHHh--cCC-CeEEEEE
Confidence 3789999986521 113456778888888 876 8888874
No 176
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.07 E-value=9.7e-10 Score=96.95 Aligned_cols=109 Identities=10% Similarity=0.074 Sum_probs=83.0
Q ss_pred HHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhh
Q 042616 30 EFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLM 107 (220)
Q Consensus 30 ~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~ 107 (220)
+.|.......+.++||||||| +|..++.++++ + ..+|++||.+ + +++.|+++++ ++.++|+++++|+.+.-
T Consensus 28 ~ai~~~~~~~~~~~VLDiGcG-tG~ls~~la~~-g--~~~v~~vD~s-~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~- 100 (328)
T 1g6q_1 28 NAIIQNKDLFKDKIVLDVGCG-TGILSMFAAKH-G--AKHVIGVDMS-S-IIEMAKELVELNGFSDKITLLRGKLEDVH- 100 (328)
T ss_dssp HHHHHHHHHHTTCEEEEETCT-TSHHHHHHHHT-C--CSEEEEEESS-T-HHHHHHHHHHHTTCTTTEEEEESCTTTSC-
T ss_pred HHHHhhHhhcCCCEEEEecCc-cHHHHHHHHHC-C--CCEEEEEChH-H-HHHHHHHHHHHcCCCCCEEEEECchhhcc-
Confidence 334344456678999999997 99999988875 1 3699999999 6 8999999986 77788999999998752
Q ss_pred hcCCCccEEEEcCCC----CCccHHHHHHHHHhhcCCCCCCEEEE
Q 042616 108 GDYRGADFVLIDCNI----DIDGHKNVFRAAKESVMHGSGAGVIV 148 (220)
Q Consensus 108 ~~~~~~D~VfiD~~k----~~~~y~~~l~~l~~~~~L~~~Ggviv 148 (220)
.-.++||+|+.+..- .......+++.+.+. |+| ||+++
T Consensus 101 ~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~--Lkp-gG~li 142 (328)
T 1g6q_1 101 LPFPKVDIIISEWMGYFLLYESMMDTVLYARDHY--LVE-GGLIF 142 (328)
T ss_dssp CSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHH--EEE-EEEEE
T ss_pred CCCCcccEEEEeCchhhcccHHHHHHHHHHHHhh--cCC-CeEEE
Confidence 113689999987421 113456788888888 876 88887
No 177
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.07 E-value=8.6e-10 Score=93.24 Aligned_cols=111 Identities=9% Similarity=-0.074 Sum_probs=79.3
Q ss_pred hhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchh------HHHHHHHHhc--ccCCcEEEEEcc-hhh-hh
Q 042616 37 AGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIG------DIDASKKSLG--RYANCIEFVKGD-AQK-LL 106 (220)
Q Consensus 37 ~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~------~~~~Ar~~l~--g~~~~Ve~v~gd-a~~-~L 106 (220)
...+..+||||||| +|+.+..|+....+ .++|++||++ +. +++.|++++. ++.++|+++++| ... .+
T Consensus 40 ~~~~~~~vLDiGcG-~G~~~~~l~~~~g~-~~~v~gvD~s-~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 116 (275)
T 3bkx_A 40 QVKPGEKILEIGCG-QGDLSAVLADQVGS-SGHVTGIDIA-SPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLG 116 (275)
T ss_dssp TCCTTCEEEEESCT-TSHHHHHHHHHHCT-TCEEEEECSS-CTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCG
T ss_pred CCCCCCEEEEeCCC-CCHHHHHHHHHhCC-CCEEEEEECC-ccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccC
Confidence 34667899999997 99999999987533 5899999999 86 8999999986 555789999998 321 12
Q ss_pred hhcCCCccEEEEcCCCC-CccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 107 MGDYRGADFVLIDCNID-IDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 107 ~~~~~~~D~VfiD~~k~-~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
+...++||+|+....-. ..+...+++.+..+ + ++||.++..+..
T Consensus 117 ~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l--~-~~gG~l~~~~~~ 161 (275)
T 3bkx_A 117 PIADQHFDRVVLAHSLWYFASANALALLFKNM--A-AVCDHVDVAEWS 161 (275)
T ss_dssp GGTTCCCSEEEEESCGGGSSCHHHHHHHHHHH--T-TTCSEEEEEEEC
T ss_pred CCCCCCEEEEEEccchhhCCCHHHHHHHHHHH--h-CCCCEEEEEEec
Confidence 32247899999876431 12344556666665 4 447777665433
No 178
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.07 E-value=1.8e-09 Score=90.73 Aligned_cols=93 Identities=14% Similarity=0.024 Sum_probs=73.5
Q ss_pred hhHHHHHHHHHhhC-----CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEE
Q 042616 26 PDVGEFISALAAGN-----NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFV 98 (220)
Q Consensus 26 p~~~~~L~~La~~~-----~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v 98 (220)
|+...++..++... ++.+|||+||| +|..++.|+...+ +.+|+++|.+ +.+++.|+++++ ++.++++++
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G-~G~~~~~la~~~~--~~~v~gvD~s-~~~~~~a~~~~~~~~~~~~v~~~ 121 (254)
T 2h00_A 46 LNYIHWVEDLIGHQDSDKSTLRRGIDIGTG-ASCIYPLLGATLN--GWYFLATEVD-DMCFNYAKKNVEQNNLSDLIKVV 121 (254)
T ss_dssp HHHHHHHHHHHCCCCGGGCCCCEEEEESCT-TTTHHHHHHHHHH--CCEEEEEESC-HHHHHHHHHHHHHTTCTTTEEEE
T ss_pred HHHHHHHHHHHhhccccCCCCCEEEEeCCC-hhHHHHHHHHhCC--CCeEEEEECC-HHHHHHHHHHHHHcCCCccEEEE
Confidence 55666777776543 46799999997 9999999987654 5899999999 999999999997 676679999
Q ss_pred Ecchhhh-hhhcC----CCccEEEEcCCC
Q 042616 99 KGDAQKL-LMGDY----RGADFVLIDCNI 122 (220)
Q Consensus 99 ~gda~~~-L~~~~----~~~D~VfiD~~k 122 (220)
++|+.+. +..+. ++||+|+.+.+-
T Consensus 122 ~~d~~~~~~~~~~~~~~~~fD~i~~npp~ 150 (254)
T 2h00_A 122 KVPQKTLLMDALKEESEIIYDFCMCNPPF 150 (254)
T ss_dssp ECCTTCSSTTTSTTCCSCCBSEEEECCCC
T ss_pred EcchhhhhhhhhhcccCCcccEEEECCCC
Confidence 9998762 32222 479999998654
No 179
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.06 E-value=6.2e-10 Score=100.02 Aligned_cols=109 Identities=11% Similarity=0.145 Sum_probs=86.5
Q ss_pred hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc-------c-cC-CcEEEEEcchhhhh--
Q 042616 38 GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG-------R-YA-NCIEFVKGDAQKLL-- 106 (220)
Q Consensus 38 ~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~-------g-~~-~~Ve~v~gda~~~L-- 106 (220)
..++.+||||||| +|..++.|+....+ +++|+++|++ +.+++.|+++++ | +. .+++++++|+.+..
T Consensus 81 ~~~~~~VLDlGcG-~G~~~~~la~~~~~-~~~v~gvD~s-~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~ 157 (383)
T 4fsd_A 81 SLEGATVLDLGCG-TGRDVYLASKLVGE-HGKVIGVDML-DNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATA 157 (383)
T ss_dssp GGTTCEEEEESCT-TSHHHHHHHHHHTT-TCEEEEEECC-HHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGC
T ss_pred CCCCCEEEEecCc-cCHHHHHHHHHhCC-CCEEEEEECC-HHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhc
Confidence 4467899999997 99999999988755 6899999999 999999999885 1 22 68999999998752
Q ss_pred ---hhcCCCccEEEEcCCCCC-ccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 107 ---MGDYRGADFVLIDCNIDI-DGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 107 ---~~~~~~~D~VfiD~~k~~-~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
+...++||+|+....... .+...+++.+.+. |+| ||.+++-+.
T Consensus 158 ~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~--Lkp-gG~l~i~~~ 204 (383)
T 4fsd_A 158 EPEGVPDSSVDIVISNCVCNLSTNKLALFKEIHRV--LRD-GGELYFSDV 204 (383)
T ss_dssp BSCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHH--EEE-EEEEEEEEE
T ss_pred ccCCCCCCCEEEEEEccchhcCCCHHHHHHHHHHH--cCC-CCEEEEEEe
Confidence 222468999998875411 4568899999999 887 888777544
No 180
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.06 E-value=5.6e-10 Score=100.39 Aligned_cols=105 Identities=10% Similarity=0.102 Sum_probs=82.4
Q ss_pred hhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhcCCCcc
Q 042616 37 AGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGDYRGAD 114 (220)
Q Consensus 37 ~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~~~~~D 114 (220)
...+.++|||+||| +|..++.++.+. ..+|++||.+ .+++.|+++++ ++.++|+++++|+.++.. .++||
T Consensus 60 ~~~~~~~VLDlGcG-tG~ls~~la~~g---~~~V~gvD~s--~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~~D 131 (376)
T 3r0q_C 60 HHFEGKTVLDVGTG-SGILAIWSAQAG---ARKVYAVEAT--KMADHARALVKANNLDHIVEVIEGSVEDISL--PEKVD 131 (376)
T ss_dssp TTTTTCEEEEESCT-TTHHHHHHHHTT---CSEEEEEESS--TTHHHHHHHHHHTTCTTTEEEEESCGGGCCC--SSCEE
T ss_pred ccCCCCEEEEeccC-cCHHHHHHHhcC---CCEEEEEccH--HHHHHHHHHHHHcCCCCeEEEEECchhhcCc--CCcce
Confidence 44667999999997 999999998861 3599999999 67899999987 777889999999988542 37899
Q ss_pred EEEEcCCC----CCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 115 FVLIDCNI----DIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 115 ~VfiD~~k----~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
+|+.+.-. .......+++.+.+. |+| ||+++....
T Consensus 132 ~Iv~~~~~~~l~~e~~~~~~l~~~~~~--Lkp-gG~li~~~~ 170 (376)
T 3r0q_C 132 VIISEWMGYFLLRESMFDSVISARDRW--LKP-TGVMYPSHA 170 (376)
T ss_dssp EEEECCCBTTBTTTCTHHHHHHHHHHH--EEE-EEEEESSEE
T ss_pred EEEEcChhhcccchHHHHHHHHHHHhh--CCC-CeEEEEecC
Confidence 99997621 013356688888888 876 999877544
No 181
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.06 E-value=4.2e-10 Score=97.02 Aligned_cols=103 Identities=15% Similarity=0.175 Sum_probs=80.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhccc----CCcEEEEEcchhhhhhhcCCCccE
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRY----ANCIEFVKGDAQKLLMGDYRGADF 115 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~----~~~Ve~v~gda~~~L~~~~~~~D~ 115 (220)
++.+||||||| +|..+..|+.. +.+|++||++ +.+++.|++++... ..+|+++++|+.++ +. .++||+
T Consensus 82 ~~~~vLDlGcG-~G~~~~~l~~~----~~~v~gvD~s-~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~-~~-~~~fD~ 153 (299)
T 3g2m_A 82 VSGPVLELAAG-MGRLTFPFLDL----GWEVTALELS-TSVLAAFRKRLAEAPADVRDRCTLVQGDMSAF-AL-DKRFGT 153 (299)
T ss_dssp CCSCEEEETCT-TTTTHHHHHTT----TCCEEEEESC-HHHHHHHHHHHHTSCHHHHTTEEEEECBTTBC-CC-SCCEEE
T ss_pred CCCcEEEEecc-CCHHHHHHHHc----CCeEEEEECC-HHHHHHHHHHHhhcccccccceEEEeCchhcC-Cc-CCCcCE
Confidence 34589999997 99999998874 6799999999 99999999998732 26899999999884 33 578999
Q ss_pred EEEcCC----CCCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 116 VLIDCN----IDIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 116 VfiD~~----k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
|++... .+..+...+++.+.+. |+| ||.+++....
T Consensus 154 v~~~~~~~~~~~~~~~~~~l~~~~~~--L~p-gG~l~~~~~~ 192 (299)
T 3g2m_A 154 VVISSGSINELDEADRRGLYASVREH--LEP-GGKFLLSLAM 192 (299)
T ss_dssp EEECHHHHTTSCHHHHHHHHHHHHHH--EEE-EEEEEEEEEC
T ss_pred EEECCcccccCCHHHHHHHHHHHHHH--cCC-CcEEEEEeec
Confidence 986421 1112457889999998 886 8888876433
No 182
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.06 E-value=1.6e-09 Score=85.93 Aligned_cols=108 Identities=19% Similarity=0.102 Sum_probs=82.8
Q ss_pred hHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhh
Q 042616 27 DVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLL 106 (220)
Q Consensus 27 ~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L 106 (220)
...+++..+ ..++.+|||+||| +|..+..|+.. +.+++++|++ +.+++.|++++ .+++++++|+.+.
T Consensus 35 ~~~~~l~~~--~~~~~~vLdiG~G-~G~~~~~l~~~----~~~v~~~D~~-~~~~~~a~~~~----~~~~~~~~d~~~~- 101 (195)
T 3cgg_A 35 GEARLIDAM--APRGAKILDAGCG-QGRIGGYLSKQ----GHDVLGTDLD-PILIDYAKQDF----PEARWVVGDLSVD- 101 (195)
T ss_dssp HHHHHHHHH--SCTTCEEEEETCT-TTHHHHHHHHT----TCEEEEEESC-HHHHHHHHHHC----TTSEEEECCTTTS-
T ss_pred hHHHHHHHh--ccCCCeEEEECCC-CCHHHHHHHHC----CCcEEEEcCC-HHHHHHHHHhC----CCCcEEEcccccC-
Confidence 345677666 4577899999997 99999998875 5799999999 99999999987 3589999998874
Q ss_pred hhcCCCccEEEEcCCC----CCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 107 MGDYRGADFVLIDCNI----DIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 107 ~~~~~~~D~VfiD~~k----~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
+...++||+|+..++. ...+...+++.+.+. |+| ||.+++.
T Consensus 102 ~~~~~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~--l~~-~G~l~~~ 146 (195)
T 3cgg_A 102 QISETDFDLIVSAGNVMGFLAEDGREPALANIHRA--LGA-DGRAVIG 146 (195)
T ss_dssp CCCCCCEEEEEECCCCGGGSCHHHHHHHHHHHHHH--EEE-EEEEEEE
T ss_pred CCCCCceeEEEECCcHHhhcChHHHHHHHHHHHHH--hCC-CCEEEEE
Confidence 2214689999997432 002346788889988 876 7777764
No 183
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=99.06 E-value=1.2e-09 Score=94.34 Aligned_cols=134 Identities=13% Similarity=0.084 Sum_probs=95.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcC-----CCCcEEEEEe-----CCchhH----------------------HHH---
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAAR-----QTGGRVVCIL-----SGVIGD----------------------IDA--- 83 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~-----~~~grV~tIE-----~d~~~~----------------------~~~--- 83 (220)
.-+..|+|+|+. -|.|++.++.... .+..+|+++| +. +.. ++.
T Consensus 68 ~vpG~ivE~GV~-rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~-~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~ 145 (257)
T 3tos_A 68 DVPGVIMEFGVR-FGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPD-VNDVDRVGPTAYQGRFAVPGGYPAYLKEVLD 145 (257)
T ss_dssp TSCSEEEEECCT-TCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCS-CCGGGTTSTTCSTTTTCCCTTHHHHHHHHHH
T ss_pred CCCCeEEEEecc-cCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCC-CccccccccccccCcccccchhHHHHHHHHH
Confidence 458899999994 7888887765321 2368999999 43 310 111
Q ss_pred HHHHhc--cc-CCcEEEEEcchhhhhhhc-----CCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCC--
Q 042616 84 SKKSLG--RY-ANCIEFVKGDAQKLLMGD-----YRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNAL-- 153 (220)
Q Consensus 84 Ar~~l~--g~-~~~Ve~v~gda~~~L~~~-----~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~-- 153 (220)
.+++++ +. .++|+++.|++.+.||.+ ..+|||||||+++ +..+.++++.+.++ |+| ||+||+||..
T Consensus 146 ~~~~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~-Y~~t~~~le~~~p~--l~~-GGvIv~DD~~~~ 221 (257)
T 3tos_A 146 AHECSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL-YEPTKAVLEAIRPY--LTK-GSIVAFDELDNP 221 (257)
T ss_dssp HHHTTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC-HHHHHHHHHHHGGG--EEE-EEEEEESSTTCT
T ss_pred HHhhhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc-cchHHHHHHHHHHH--hCC-CcEEEEcCCCCC
Confidence 122333 43 488999999999999874 2469999999997 45667789999998 865 9999999985
Q ss_pred -CCC---Ccc------ceEEEeeecCCcEEEEEEe
Q 042616 154 -PKG---SWR------GYKTHFLPIGEGLLVTRIG 178 (220)
Q Consensus 154 -~~g---~~~------~~~s~~lPig~Gl~v~~~~ 178 (220)
++| .|. +..-..+|++.+....++.
T Consensus 222 ~w~G~~~A~~ef~~~~~~~i~~~p~~~~~~y~~~~ 256 (257)
T 3tos_A 222 KWPGENIAMRKVLGLDHAPLRLLPGRPAPAYLRWG 256 (257)
T ss_dssp TCTHHHHHHHHHTCTTSSCCEECTTCSCCEEEETT
T ss_pred CChHHHHHHHHHHhhCCCeEEEccCCCCCEEEEec
Confidence 344 233 4666678888887766653
No 184
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.06 E-value=3.7e-10 Score=99.57 Aligned_cols=99 Identities=16% Similarity=0.247 Sum_probs=80.9
Q ss_pred CCCCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEE
Q 042616 20 GKRGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEF 97 (220)
Q Consensus 20 ~~~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~ 97 (220)
+...+....+.++..++...+..+|||+||| +|..|+.||..+.. .|+|+++|.+ +.+++.+++|++ ++ .+|++
T Consensus 82 G~~~~Qd~~s~l~~~~l~~~~g~~VLDlcaG-~G~kt~~la~~~~~-~g~V~a~D~~-~~~l~~~~~n~~r~g~-~~v~~ 157 (309)
T 2b9e_A 82 GHLILQDRASCLPAMLLDPPPGSHVIDACAA-PGNKTSHLAALLKN-QGKIFAFDLD-AKRLASMATLLARAGV-SCCEL 157 (309)
T ss_dssp TSEEECCTGGGHHHHHHCCCTTCEEEESSCT-TCHHHHHHHHHHTT-CSEEEEEESC-HHHHHHHHHHHHHTTC-CSEEE
T ss_pred CeEEEECHHHHHHHHHhCCCCCCEEEEeCCC-hhHHHHHHHHHhCC-CCEEEEEeCC-HHHHHHHHHHHHHcCC-CeEEE
Confidence 4444555566777777777888999999996 99999999988754 6999999999 999999999997 66 57999
Q ss_pred EEcchhhhhhhc--CCCccEEEEcCCC
Q 042616 98 VKGDAQKLLMGD--YRGADFVLIDCNI 122 (220)
Q Consensus 98 v~gda~~~L~~~--~~~~D~VfiD~~k 122 (220)
+++|+.++.+.. ..+||.|++|++-
T Consensus 158 ~~~D~~~~~~~~~~~~~fD~Vl~D~Pc 184 (309)
T 2b9e_A 158 AEEDFLAVSPSDPRYHEVHYILLDPSC 184 (309)
T ss_dssp EECCGGGSCTTCGGGTTEEEEEECCCC
T ss_pred EeCChHhcCccccccCCCCEEEEcCCc
Confidence 999998865432 2579999999764
No 185
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.05 E-value=1.5e-09 Score=93.59 Aligned_cols=96 Identities=13% Similarity=0.030 Sum_probs=71.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeC-CchhHHHHHHHHh-----c--ccC----CcEEEEEcch----
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILS-GVIGDIDASKKSL-----G--RYA----NCIEFVKGDA---- 102 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~-d~~~~~~~Ar~~l-----~--g~~----~~Ve~v~gda---- 102 (220)
.+.++|||+||| +|+.++.++.. . .++|+++|. + +++++.|++|+ + ++. ++|+++..+.
T Consensus 78 ~~~~~vLDlG~G-~G~~~~~~a~~-~--~~~v~~~D~s~-~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~ 152 (281)
T 3bzb_A 78 IAGKTVCELGAG-AGLVSIVAFLA-G--ADQVVATDYPD-PEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSP 152 (281)
T ss_dssp TTTCEEEETTCT-TSHHHHHHHHT-T--CSEEEEEECSC-HHHHHHHHHHHHTTCC----------CCCEEEECCTTSCT
T ss_pred cCCCeEEEeccc-ccHHHHHHHHc-C--CCEEEEEeCCC-HHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCcc
Confidence 467899999997 99999988874 1 359999999 9 99999999998 4 443 4788885543
Q ss_pred hhhhhh-cCCCccEEEE-cCCCCCccHHHHHHHHHhhcCCC
Q 042616 103 QKLLMG-DYRGADFVLI-DCNIDIDGHKNVFRAAKESVMHG 141 (220)
Q Consensus 103 ~~~L~~-~~~~~D~Vfi-D~~k~~~~y~~~l~~l~~~~~L~ 141 (220)
.++.+. ..++||+|+. |.-....++..+++.+.+. |+
T Consensus 153 ~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~--Lk 191 (281)
T 3bzb_A 153 DSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKML--LA 191 (281)
T ss_dssp HHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHH--BC
T ss_pred HHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHH--hc
Confidence 233221 1468999987 7655335678899999998 86
No 186
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.05 E-value=9e-10 Score=93.72 Aligned_cols=104 Identities=10% Similarity=-0.023 Sum_probs=81.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhcCCCccEE
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGDYRGADFV 116 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~~~~~D~V 116 (220)
.+..+||||||| +|..+..|+.. + .++|+++|++ +.+++.|++++. ++..+++++++|+.+......++||+|
T Consensus 63 ~~~~~vLDiGcG-~G~~~~~l~~~-~--~~~v~gvD~s-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v 137 (298)
T 1ri5_A 63 KRGDSVLDLGCG-KGGDLLKYERA-G--IGEYYGVDIA-EVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVI 137 (298)
T ss_dssp CTTCEEEEETCT-TTTTHHHHHHH-T--CSEEEEEESC-HHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEE
T ss_pred CCCCeEEEECCC-CCHHHHHHHHC-C--CCEEEEEECC-HHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEE
Confidence 577899999997 99988888764 1 4699999999 999999999987 555689999999987421124689999
Q ss_pred EEcCCCC-----CccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 117 LIDCNID-----IDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 117 fiD~~k~-----~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
+...... ..+....++.+.+. |+| ||.+++.
T Consensus 138 ~~~~~l~~~~~~~~~~~~~l~~~~~~--Lkp-gG~l~~~ 173 (298)
T 1ri5_A 138 SSQFSFHYAFSTSESLDIAQRNIARH--LRP-GGYFIMT 173 (298)
T ss_dssp EEESCGGGGGSSHHHHHHHHHHHHHT--EEE-EEEEEEE
T ss_pred EECchhhhhcCCHHHHHHHHHHHHHh--cCC-CCEEEEE
Confidence 9875431 13457788999988 876 8887765
No 187
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.05 E-value=8.8e-10 Score=90.31 Aligned_cols=103 Identities=13% Similarity=0.076 Sum_probs=80.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--cc----CCcEEEEEcchhhhhhhcCCC
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RY----ANCIEFVKGDAQKLLMGDYRG 112 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~----~~~Ve~v~gda~~~L~~~~~~ 112 (220)
.+..+|||+||| +|..+..|+.. +.+|+++|.+ +.+++.|++++. ++ .++++++++|+.+. +...++
T Consensus 29 ~~~~~vLdiG~G-~G~~~~~l~~~----~~~v~~vD~s-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~ 101 (235)
T 3sm3_A 29 QEDDEILDIGCG-SGKISLELASK----GYSVTGIDIN-SEAIRLAETAARSPGLNQKTGGKAEFKVENASSL-SFHDSS 101 (235)
T ss_dssp CTTCEEEEETCT-TSHHHHHHHHT----TCEEEEEESC-HHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSC-CSCTTC
T ss_pred CCCCeEEEECCC-CCHHHHHHHhC----CCeEEEEECC-HHHHHHHHHHHHhcCCccccCcceEEEEeccccc-CCCCCc
Confidence 467899999997 99999999875 6799999999 999999999986 43 24699999999874 332578
Q ss_pred ccEEEEcCCCCC-cc---HHHHHHHHHhhcCCCCCCEEEEEec
Q 042616 113 ADFVLIDCNIDI-DG---HKNVFRAAKESVMHGSGAGVIVGYN 151 (220)
Q Consensus 113 ~D~VfiD~~k~~-~~---y~~~l~~l~~~~~L~~~Ggviv~dN 151 (220)
||+|+....... .+ ...+++.+.+. |+| ||.+++-.
T Consensus 102 ~D~v~~~~~l~~~~~~~~~~~~l~~~~~~--L~p-gG~l~~~~ 141 (235)
T 3sm3_A 102 FDFAVMQAFLTSVPDPKERSRIIKEVFRV--LKP-GAYLYLVE 141 (235)
T ss_dssp EEEEEEESCGGGCCCHHHHHHHHHHHHHH--EEE-EEEEEEEE
T ss_pred eeEEEEcchhhcCCCHHHHHHHHHHHHHH--cCC-CeEEEEEE
Confidence 999998764311 12 23789999998 886 77776643
No 188
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.03 E-value=5.1e-10 Score=102.34 Aligned_cols=111 Identities=14% Similarity=-0.029 Sum_probs=81.4
Q ss_pred HHHHHHHhh--CCCCEEEEEcCCc-----hHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcch
Q 042616 30 EFISALAAG--NNAQLIVMACSSI-----AVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDA 102 (220)
Q Consensus 30 ~~L~~La~~--~~a~~ILEIGtg~-----~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda 102 (220)
+++..+... .++.+|||||||+ +|..++.++....+ +++|++||.+ +++. . ...+|+++++|+
T Consensus 204 ~~Ye~lL~~l~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP-~a~V~GVDiS-p~m~-------~-~~~rI~fv~GDa 273 (419)
T 3sso_A 204 PHYDRHFRDYRNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFP-RGQIYGLDIM-DKSH-------V-DELRIRTIQGDQ 273 (419)
T ss_dssp HHHHHHHGGGTTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCT-TCEEEEEESS-CCGG-------G-CBTTEEEEECCT
T ss_pred HHHHHHHHhhcCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCC-CCEEEEEECC-HHHh-------h-cCCCcEEEEecc
Confidence 344444332 3689999999962 46677888776544 7899999999 7752 1 126899999999
Q ss_pred hhh--hhhc---CCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 103 QKL--LMGD---YRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 103 ~~~--L~~~---~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
.+. +..+ .++||+||.|+.+...++...|+.+.+. |+| ||++++.|+.
T Consensus 274 ~dlpf~~~l~~~d~sFDlVisdgsH~~~d~~~aL~el~rv--LKP-GGvlVi~Dl~ 326 (419)
T 3sso_A 274 NDAEFLDRIARRYGPFDIVIDDGSHINAHVRTSFAALFPH--VRP-GGLYVIEDMW 326 (419)
T ss_dssp TCHHHHHHHHHHHCCEEEEEECSCCCHHHHHHHHHHHGGG--EEE-EEEEEEECGG
T ss_pred cccchhhhhhcccCCccEEEECCcccchhHHHHHHHHHHh--cCC-CeEEEEEecc
Confidence 763 2111 3789999999876334567889999998 886 9999999887
No 189
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.03 E-value=1.5e-09 Score=96.47 Aligned_cols=102 Identities=7% Similarity=0.040 Sum_probs=80.3
Q ss_pred hhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhcCCCcc
Q 042616 37 AGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGDYRGAD 114 (220)
Q Consensus 37 ~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~~~~~D 114 (220)
...+.++||||||| +|..++.++.+ ..++|++||.+ + +++.|+++++ ++.++|+++.+|+.+.- +.++||
T Consensus 47 ~~~~~~~VLDiGcG-tG~ls~~la~~---g~~~V~~vD~s-~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~--~~~~~D 118 (348)
T 2y1w_A 47 TDFKDKIVLDVGCG-SGILSFFAAQA---GARKIYAVEAS-T-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS--LPEQVD 118 (348)
T ss_dssp GGTTTCEEEEETCT-TSHHHHHHHHT---TCSEEEEEECS-T-HHHHHHHHHHHTTCTTTEEEEESCTTTCC--CSSCEE
T ss_pred ccCCcCEEEEcCCC-ccHHHHHHHhC---CCCEEEEECCH-H-HHHHHHHHHHHcCCCCcEEEEEcchhhCC--CCCcee
Confidence 44578999999997 99999988874 14699999999 7 7899999886 67688999999998752 236899
Q ss_pred EEEEcCCC---CCccHHHHHHHHHhhcCCCCCCEEEEE
Q 042616 115 FVLIDCNI---DIDGHKNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 115 ~VfiD~~k---~~~~y~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
+|+..... ....+.+.+..+.+. |+| ||+++.
T Consensus 119 ~Ivs~~~~~~~~~~~~~~~l~~~~~~--Lkp-gG~li~ 153 (348)
T 2y1w_A 119 IIISEPMGYMLFNERMLESYLHAKKY--LKP-SGNMFP 153 (348)
T ss_dssp EEEECCCBTTBTTTSHHHHHHHGGGG--EEE-EEEEES
T ss_pred EEEEeCchhcCChHHHHHHHHHHHhh--cCC-CeEEEE
Confidence 99988532 114567788888887 876 888873
No 190
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.03 E-value=1.3e-09 Score=88.80 Aligned_cols=106 Identities=13% Similarity=-0.001 Sum_probs=81.6
Q ss_pred HHHHHHHHh-hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhh
Q 042616 29 GEFISALAA-GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLM 107 (220)
Q Consensus 29 ~~~L~~La~-~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~ 107 (220)
.+.+..++. ..+..+|||+||| +|..+..|+.. +.+|+++|.+ +.+++.|++++ +++++++|+.+..
T Consensus 31 ~~~~~~~~~~~~~~~~vLDiGcG-~G~~~~~l~~~----~~~v~~vD~s-~~~~~~a~~~~-----~~~~~~~d~~~~~- 98 (211)
T 3e23_A 31 SATLTKFLGELPAGAKILELGCG-AGYQAEAMLAA----GFDVDATDGS-PELAAEASRRL-----GRPVRTMLFHQLD- 98 (211)
T ss_dssp CHHHHHHHTTSCTTCEEEESSCT-TSHHHHHHHHT----TCEEEEEESC-HHHHHHHHHHH-----TSCCEECCGGGCC-
T ss_pred hHHHHHHHHhcCCCCcEEEECCC-CCHHHHHHHHc----CCeEEEECCC-HHHHHHHHHhc-----CCceEEeeeccCC-
Confidence 334444444 3457899999997 99999999874 6799999999 99999999987 4778889988753
Q ss_pred hcCCCccEEEEcCCCCC---ccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 108 GDYRGADFVLIDCNIDI---DGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 108 ~~~~~~D~VfiD~~k~~---~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
..++||+|+....... .+...+++.+.+. |+| ||++++.
T Consensus 99 -~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~--Lkp-gG~l~~~ 140 (211)
T 3e23_A 99 -AIDAYDAVWAHACLLHVPRDELADVLKLIWRA--LKP-GGLFYAS 140 (211)
T ss_dssp -CCSCEEEEEECSCGGGSCHHHHHHHHHHHHHH--EEE-EEEEEEE
T ss_pred -CCCcEEEEEecCchhhcCHHHHHHHHHHHHHh--cCC-CcEEEEE
Confidence 3578999998764311 2556889999998 886 7877765
No 191
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.03 E-value=2e-10 Score=98.73 Aligned_cols=88 Identities=17% Similarity=0.109 Sum_probs=71.3
Q ss_pred HHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCch-------hHHHHHHHHhc--ccCCcEEEEE
Q 042616 29 GEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVI-------GDIDASKKSLG--RYANCIEFVK 99 (220)
Q Consensus 29 ~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~-------~~~~~Ar~~l~--g~~~~Ve~v~ 99 (220)
.++|...+...+..+|||+||| +|..|+.||.. +++|++||.+ + ++++.|++|++ ++.++|++++
T Consensus 72 ~~~l~~a~~~~~~~~VLDlgcG-~G~~a~~lA~~----g~~V~~vD~s-~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~ 145 (258)
T 2r6z_A 72 GELIAKAVNHTAHPTVWDATAG-LGRDSFVLASL----GLTVTAFEQH-PAVACLLSDGIRRALLNPETQDTAARINLHF 145 (258)
T ss_dssp -CHHHHHTTGGGCCCEEETTCT-TCHHHHHHHHT----TCCEEEEECC-HHHHHHHHHHHHHHHHSHHHHHHHTTEEEEE
T ss_pred hHHHHHHhCcCCcCeEEEeeCc-cCHHHHHHHHh----CCEEEEEECC-hhhhHHHHHHHHHHHhHHHhhCCccCeEEEE
Confidence 3455554455556899999997 99999999973 6899999999 9 99999999886 6656799999
Q ss_pred cchhhhhhhcC---CCccEEEEcCCC
Q 042616 100 GDAQKLLMGDY---RGADFVLIDCNI 122 (220)
Q Consensus 100 gda~~~L~~~~---~~~D~VfiD~~k 122 (220)
+|+.++++.+. ++||+|++|+.-
T Consensus 146 ~d~~~~l~~~~~~~~~fD~V~~dP~~ 171 (258)
T 2r6z_A 146 GNAAEQMPALVKTQGKPDIVYLDPMY 171 (258)
T ss_dssp SCHHHHHHHHHHHHCCCSEEEECCCC
T ss_pred CCHHHHHHhhhccCCCccEEEECCCC
Confidence 99999886543 689999999743
No 192
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.02 E-value=6.6e-10 Score=92.85 Aligned_cols=101 Identities=15% Similarity=0.049 Sum_probs=81.3
Q ss_pred hhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccEE
Q 042616 37 AGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFV 116 (220)
Q Consensus 37 ~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~V 116 (220)
...++.+|||+||| +|..+..|+...+ +++|+++|++ +.+++.|+++. .+++++++|+.+.. ..++||+|
T Consensus 30 ~~~~~~~vLdiG~G-~G~~~~~l~~~~~--~~~v~~~D~s-~~~~~~a~~~~----~~~~~~~~d~~~~~--~~~~fD~v 99 (259)
T 2p35_A 30 PLERVLNGYDLGCG-PGNSTELLTDRYG--VNVITGIDSD-DDMLEKAADRL----PNTNFGKADLATWK--PAQKADLL 99 (259)
T ss_dssp CCSCCSSEEEETCT-TTHHHHHHHHHHC--TTSEEEEESC-HHHHHHHHHHS----TTSEEEECCTTTCC--CSSCEEEE
T ss_pred CCCCCCEEEEecCc-CCHHHHHHHHhCC--CCEEEEEECC-HHHHHHHHHhC----CCcEEEECChhhcC--ccCCcCEE
Confidence 34567899999997 9999999998764 6899999999 99999999883 57999999998754 35789999
Q ss_pred EEcCCCC-CccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 117 LIDCNID-IDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 117 fiD~~k~-~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
+...... -.+....++.+.+. |+| ||.+++.
T Consensus 100 ~~~~~l~~~~~~~~~l~~~~~~--L~p-gG~l~~~ 131 (259)
T 2p35_A 100 YANAVFQWVPDHLAVLSQLMDQ--LES-GGVLAVQ 131 (259)
T ss_dssp EEESCGGGSTTHHHHHHHHGGG--EEE-EEEEEEE
T ss_pred EEeCchhhCCCHHHHHHHHHHh--cCC-CeEEEEE
Confidence 9876431 13568889999998 887 7776664
No 193
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.02 E-value=5.1e-10 Score=94.21 Aligned_cols=115 Identities=14% Similarity=0.052 Sum_probs=82.4
Q ss_pred HHHHHHHhhC---CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcc-----cCCc-------
Q 042616 30 EFISALAAGN---NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGR-----YANC------- 94 (220)
Q Consensus 30 ~~L~~La~~~---~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g-----~~~~------- 94 (220)
+++..+.... ++.+|||+||| +|..++.|+..+...+.+|+++|.+ +.+++.|++++.. +.++
T Consensus 38 ~l~~~~l~~~~~~~~~~vLD~gcG-sG~~~~~la~~~~~~~~~v~gvDis-~~~l~~A~~~~~~~~~~~~~~~~~~~~~~ 115 (250)
T 1o9g_A 38 EIFQRALARLPGDGPVTLWDPCCG-SGYLLTVLGLLHRRSLRQVIASDVD-PAPLELAAKNLALLSPAGLTARELERREQ 115 (250)
T ss_dssp HHHHHHHHTSSCCSCEEEEETTCT-TSHHHHHHHHHTGGGEEEEEEEESC-HHHHHHHHHHHHTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCeEEECCCC-CCHHHHHHHHHhccCCCeEEEEECC-HHHHHHHHHHHHHhhhccccccchhhhhh
Confidence 4555554432 56799999997 9999999998631125799999999 9999999988752 2122
Q ss_pred ------------------EE-------------EEEcchhhhhhh----cCCCccEEEEcCCCC----------CccHHH
Q 042616 95 ------------------IE-------------FVKGDAQKLLMG----DYRGADFVLIDCNID----------IDGHKN 129 (220)
Q Consensus 95 ------------------Ve-------------~v~gda~~~L~~----~~~~~D~VfiD~~k~----------~~~y~~ 129 (220)
|+ ++++|+.+.++. ...+||+||.+.+-. ...+..
T Consensus 116 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~ 195 (250)
T 1o9g_A 116 SERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAG 195 (250)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHH
T ss_pred hhhcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHH
Confidence 67 999999886531 234899999985420 023568
Q ss_pred HHHHHHhhcCCCCCCEEEEE
Q 042616 130 VFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 130 ~l~~l~~~~~L~~~Ggviv~ 149 (220)
+++.+.+. |+| ||++++
T Consensus 196 ~l~~~~~~--Lkp-gG~l~~ 212 (250)
T 1o9g_A 196 LLRSLASA--LPA-HAVIAV 212 (250)
T ss_dssp HHHHHHHH--SCT-TCEEEE
T ss_pred HHHHHHHh--cCC-CcEEEE
Confidence 88999998 887 666554
No 194
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.02 E-value=1.1e-09 Score=93.38 Aligned_cols=104 Identities=13% Similarity=0.142 Sum_probs=82.8
Q ss_pred HHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCC
Q 042616 32 ISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYR 111 (220)
Q Consensus 32 L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~ 111 (220)
+...+...++.+||||||| +|..+..|+. + +++|+++|++ +.+++.|++++ .+++++++|+.+ ++. .+
T Consensus 49 l~~~l~~~~~~~vLDiGcG-~G~~~~~l~~---~-~~~v~gvD~s-~~~~~~a~~~~----~~~~~~~~d~~~-~~~-~~ 116 (279)
T 3ccf_A 49 LLQLLNPQPGEFILDLGCG-TGQLTEKIAQ---S-GAEVLGTDNA-ATMIEKARQNY----PHLHFDVADARN-FRV-DK 116 (279)
T ss_dssp HHHHHCCCTTCEEEEETCT-TSHHHHHHHH---T-TCEEEEEESC-HHHHHHHHHHC----TTSCEEECCTTT-CCC-SS
T ss_pred HHHHhCCCCCCEEEEecCC-CCHHHHHHHh---C-CCeEEEEECC-HHHHHHHHhhC----CCCEEEECChhh-CCc-CC
Confidence 3344456678899999997 9999999987 2 7899999999 99999999876 578999999987 443 57
Q ss_pred CccEEEEcCCCCC-ccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 112 GADFVLIDCNIDI-DGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 112 ~~D~VfiD~~k~~-~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
+||+|+....... .+....++.+.+. |+| ||.+++.
T Consensus 117 ~fD~v~~~~~l~~~~d~~~~l~~~~~~--Lkp-gG~l~~~ 153 (279)
T 3ccf_A 117 PLDAVFSNAMLHWVKEPEAAIASIHQA--LKS-GGRFVAE 153 (279)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHH--EEE-EEEEEEE
T ss_pred CcCEEEEcchhhhCcCHHHHHHHHHHh--cCC-CcEEEEE
Confidence 8999998764311 4567889999998 886 8877764
No 195
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.02 E-value=1e-09 Score=90.05 Aligned_cols=103 Identities=5% Similarity=0.000 Sum_probs=75.1
Q ss_pred hhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHH----HHHhc--ccCCcEEEEEcchhhhhhhcC
Q 042616 37 AGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDAS----KKSLG--RYANCIEFVKGDAQKLLMGDY 110 (220)
Q Consensus 37 ~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~A----r~~l~--g~~~~Ve~v~gda~~~L~~~~ 110 (220)
...+..+|||+||| +|..+..|+...+ +++|++||.+ +++++.+ +++.. ++ .+++++++|+.+ +|...
T Consensus 24 ~~~~~~~vLDiGcG-~G~~~~~la~~~p--~~~v~gvD~s-~~~l~~~~~~a~~~~~~~~~-~~v~~~~~d~~~-l~~~~ 97 (218)
T 3mq2_A 24 RSQYDDVVLDVGTG-DGKHPYKVARQNP--SRLVVALDAD-KSRMEKISAKAAAKPAKGGL-PNLLYLWATAER-LPPLS 97 (218)
T ss_dssp HTTSSEEEEEESCT-TCHHHHHHHHHCT--TEEEEEEESC-GGGGHHHHHHHTSCGGGTCC-TTEEEEECCSTT-CCSCC
T ss_pred hccCCCEEEEecCC-CCHHHHHHHHHCC--CCEEEEEECC-HHHHHHHHHHHHHhhhhcCC-CceEEEecchhh-CCCCC
Confidence 45677899999997 9999999998643 6899999999 9977743 33332 33 579999999988 44433
Q ss_pred CCccEEEEcCCCC------CccHHHHHHHHHhhcCCCCCCEEEEE
Q 042616 111 RGADFVLIDCNID------IDGHKNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 111 ~~~D~VfiD~~k~------~~~y~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
+. |.+++..... ..+...+++.+.+. |+| ||.+++
T Consensus 98 ~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~--Lkp-gG~l~~ 138 (218)
T 3mq2_A 98 GV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAV--CRP-GASFLV 138 (218)
T ss_dssp CE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHT--EEE-EEEEEE
T ss_pred CC-CEEEEEccchhhhhhhhccHHHHHHHHHHH--cCC-CcEEEE
Confidence 44 8877655320 01226788999998 887 787776
No 196
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.02 E-value=9.8e-10 Score=93.02 Aligned_cols=112 Identities=16% Similarity=0.088 Sum_probs=86.6
Q ss_pred CCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcch
Q 042616 23 GKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDA 102 (220)
Q Consensus 23 ~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda 102 (220)
...+...+.+..++...++.+||||||| +|..+..|+. + +.+|+++|++ +.+++.|+++. +++++++|+
T Consensus 17 ~~~~~~~~~l~~~~~~~~~~~vLDiGcG-~G~~~~~l~~---~-~~~v~gvD~s-~~~~~~a~~~~-----~~~~~~~d~ 85 (261)
T 3ege_A 17 VPDIRIVNAIINLLNLPKGSVIADIGAG-TGGYSVALAN---Q-GLFVYAVEPS-IVMRQQAVVHP-----QVEWFTGYA 85 (261)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEEEEETCT-TSHHHHHHHT---T-TCEEEEECSC-HHHHHSSCCCT-----TEEEECCCT
T ss_pred cccHHHHHHHHHHhCCCCCCEEEEEcCc-ccHHHHHHHh---C-CCEEEEEeCC-HHHHHHHHhcc-----CCEEEECch
Confidence 3456677777777777788999999997 9999999986 2 7899999999 88887766653 799999999
Q ss_pred hhhhhhcCCCccEEEEcCCC-CCccHHHHHHHHHhhcCCCCCCE-EEEEe
Q 042616 103 QKLLMGDYRGADFVLIDCNI-DIDGHKNVFRAAKESVMHGSGAG-VIVGY 150 (220)
Q Consensus 103 ~~~L~~~~~~~D~VfiD~~k-~~~~y~~~l~~l~~~~~L~~~Gg-viv~d 150 (220)
.+ ++...++||+|+.-... .-.+....++.+.+. |+ || +++.+
T Consensus 86 ~~-~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~--Lk--gG~~~~~~ 130 (261)
T 3ege_A 86 EN-LALPDKSVDGVISILAIHHFSHLEKSFQEMQRI--IR--DGTIVLLT 130 (261)
T ss_dssp TS-CCSCTTCBSEEEEESCGGGCSSHHHHHHHHHHH--BC--SSCEEEEE
T ss_pred hh-CCCCCCCEeEEEEcchHhhccCHHHHHHHHHHH--hC--CcEEEEEE
Confidence 77 44324789999987643 115678899999998 85 55 55554
No 197
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.01 E-value=1.9e-09 Score=89.84 Aligned_cols=104 Identities=12% Similarity=0.067 Sum_probs=80.6
Q ss_pred hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccEEE
Q 042616 38 GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFVL 117 (220)
Q Consensus 38 ~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~Vf 117 (220)
..++.+||||||| +|..+..|+... ..+|+++|++ +.+++.|++++... .+++++++|+.+. +...++||+|+
T Consensus 91 ~~~~~~vLDiG~G-~G~~~~~l~~~~---~~~v~~vD~s-~~~~~~a~~~~~~~-~~~~~~~~d~~~~-~~~~~~fD~v~ 163 (254)
T 1xtp_A 91 GHGTSRALDCGAG-IGRITKNLLTKL---YATTDLLEPV-KHMLEEAKRELAGM-PVGKFILASMETA-TLPPNTYDLIV 163 (254)
T ss_dssp TCCCSEEEEETCT-TTHHHHHTHHHH---CSEEEEEESC-HHHHHHHHHHTTTS-SEEEEEESCGGGC-CCCSSCEEEEE
T ss_pred ccCCCEEEEECCC-cCHHHHHHHHhh---cCEEEEEeCC-HHHHHHHHHHhccC-CceEEEEccHHHC-CCCCCCeEEEE
Confidence 3457899999997 999999988764 4689999999 99999999998744 6799999999874 32246899999
Q ss_pred EcCCCCC---ccHHHHHHHHHhhcCCCCCCEEEEE-ec
Q 042616 118 IDCNIDI---DGHKNVFRAAKESVMHGSGAGVIVG-YN 151 (220)
Q Consensus 118 iD~~k~~---~~y~~~l~~l~~~~~L~~~Ggviv~-dN 151 (220)
....... .+...+++.+.+. |+| ||.+++ ++
T Consensus 164 ~~~~l~~~~~~~~~~~l~~~~~~--Lkp-gG~l~i~~~ 198 (254)
T 1xtp_A 164 IQWTAIYLTDADFVKFFKHCQQA--LTP-NGYIFFKEN 198 (254)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHH--EEE-EEEEEEEEE
T ss_pred EcchhhhCCHHHHHHHHHHHHHh--cCC-CeEEEEEec
Confidence 8665311 2356788999998 887 665544 44
No 198
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.01 E-value=2e-09 Score=85.90 Aligned_cols=104 Identities=13% Similarity=0.020 Sum_probs=75.4
Q ss_pred hhHHHHHHHHHhh--CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchh
Q 042616 26 PDVGEFISALAAG--NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQ 103 (220)
Q Consensus 26 p~~~~~L~~La~~--~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~ 103 (220)
|+...++.. ... .++.+|||+||| +|..++.|+.. + +|++||.+ +.+++. ..+++++++|+.
T Consensus 8 ~~~~~l~~~-l~~~~~~~~~vLD~GcG-~G~~~~~l~~~----~-~v~gvD~s-~~~~~~--------~~~~~~~~~d~~ 71 (170)
T 3q87_B 8 EDTYTLMDA-LEREGLEMKIVLDLGTS-TGVITEQLRKR----N-TVVSTDLN-IRALES--------HRGGNLVRADLL 71 (170)
T ss_dssp HHHHHHHHH-HHHHTCCSCEEEEETCT-TCHHHHHHTTT----S-EEEEEESC-HHHHHT--------CSSSCEEECSTT
T ss_pred ccHHHHHHH-HHhhcCCCCeEEEeccC-ccHHHHHHHhc----C-cEEEEECC-HHHHhc--------ccCCeEEECChh
Confidence 444444444 454 677899999997 99999988763 4 99999999 888876 367999999998
Q ss_pred hhhhhcCCCccEEEEcCCCCC----------ccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 104 KLLMGDYRGADFVLIDCNIDI----------DGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 104 ~~L~~~~~~~D~VfiD~~k~~----------~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
+.++. ++||+|+.+.+-.. .+....++.+.+. + |.|-+++..
T Consensus 72 ~~~~~--~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l-pgG~l~~~~ 123 (170)
T 3q87_B 72 CSINQ--ESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDA--V-TVGMLYLLV 123 (170)
T ss_dssp TTBCG--GGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHH--C-CSSEEEEEE
T ss_pred hhccc--CCCCEEEECCCCccCCccccccCCcchHHHHHHHHhh--C-CCCEEEEEE
Confidence 85543 78999999876410 1235677888887 7 644444444
No 199
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.00 E-value=4.6e-09 Score=86.54 Aligned_cols=103 Identities=12% Similarity=0.028 Sum_probs=79.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccEEEE
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFVLI 118 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~Vfi 118 (220)
.++.+|||+||| +|..+..|+... .+++++|++ +.+++.|++++ .+++++++|+.+.. . .++||+|+.
T Consensus 39 ~~~~~vLdiG~G-~G~~~~~l~~~~----~~v~~~D~s-~~~~~~a~~~~----~~~~~~~~d~~~~~-~-~~~~D~v~~ 106 (239)
T 3bxo_A 39 PEASSLLDVACG-TGTHLEHFTKEF----GDTAGLELS-EDMLTHARKRL----PDATLHQGDMRDFR-L-GRKFSAVVS 106 (239)
T ss_dssp TTCCEEEEETCT-TSHHHHHHHHHH----SEEEEEESC-HHHHHHHHHHC----TTCEEEECCTTTCC-C-SSCEEEEEE
T ss_pred CCCCeEEEeccc-CCHHHHHHHHhC----CcEEEEeCC-HHHHHHHHHhC----CCCEEEECCHHHcc-c-CCCCcEEEE
Confidence 467899999997 999999998863 489999999 99999999886 46899999998743 2 568999994
Q ss_pred cCC----C-CCccHHHHHHHHHhhcCCCCCCEEEEEecCCCCC
Q 042616 119 DCN----I-DIDGHKNVFRAAKESVMHGSGAGVIVGYNALPKG 156 (220)
Q Consensus 119 D~~----k-~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~~~g 156 (220)
-.. . +..+....++.+.+. |+| ||.+++.....+.
T Consensus 107 ~~~~~~~~~~~~~~~~~l~~~~~~--L~p-gG~l~~~~~~~~~ 146 (239)
T 3bxo_A 107 MFSSVGYLKTTEELGAAVASFAEH--LEP-GGVVVVEPWWFPE 146 (239)
T ss_dssp CTTGGGGCCSHHHHHHHHHHHHHT--EEE-EEEEEECCCCCTT
T ss_pred cCchHhhcCCHHHHHHHHHHHHHh--cCC-CeEEEEEeccCcc
Confidence 321 1 013456788899988 876 9998887554433
No 200
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.99 E-value=2.2e-09 Score=105.55 Aligned_cols=113 Identities=12% Similarity=-0.013 Sum_probs=84.2
Q ss_pred HHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--------ccCCcEEEEEc
Q 042616 29 GEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--------RYANCIEFVKG 100 (220)
Q Consensus 29 ~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--------g~~~~Ve~v~g 100 (220)
.+++..++...++.+||||||| +|+.++.|+...++ ..+|++||++ +.+++.|+++++ ++ .+|+++++
T Consensus 710 le~LLelL~~~~g~rVLDVGCG-TG~lai~LAr~g~p-~a~VtGVDIS-~emLe~AReRLa~~lnAkr~gl-~nVefiqG 785 (950)
T 3htx_A 710 VEYALKHIRESSASTLVDFGCG-SGSLLDSLLDYPTS-LQTIIGVDIS-PKGLARAAKMLHVKLNKEACNV-KSATLYDG 785 (950)
T ss_dssp HHHHHHHHHHSCCSEEEEETCS-SSHHHHHHTSSCCC-CCEEEEEESC-HHHHHHHHHHHHHHTTTTCSSC-SEEEEEES
T ss_pred HHHHHHHhcccCCCEEEEECCC-CCHHHHHHHHhCCC-CCeEEEEECC-HHHHHHHHHHhhhccchhhcCC-CceEEEEC
Confidence 3445555566788999999997 99999999875432 4799999999 999999999664 22 47999999
Q ss_pred chhhhhhhcCCCccEEEEcCCCCC---ccHHHHHHHHHhhcCCCCCCEEEEE
Q 042616 101 DAQKLLMGDYRGADFVLIDCNIDI---DGHKNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 101 da~~~L~~~~~~~D~VfiD~~k~~---~~y~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
|+.++ +...++||+|+...-... .....+++.+.+. |+| |.+|+.
T Consensus 786 Da~dL-p~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~Rv--LKP-G~LIIS 833 (950)
T 3htx_A 786 SILEF-DSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSL--FHP-KLLIVS 833 (950)
T ss_dssp CTTSC-CTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHT--TCC-SEEEEE
T ss_pred chHhC-CcccCCeeEEEEeCchhhCChHHHHHHHHHHHHH--cCC-CEEEEE
Confidence 99884 333578999998665411 1223477888888 887 755554
No 201
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.99 E-value=1.8e-09 Score=93.16 Aligned_cols=112 Identities=15% Similarity=0.047 Sum_probs=77.5
Q ss_pred hhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhh-
Q 042616 26 PDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQK- 104 (220)
Q Consensus 26 p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~- 104 (220)
|...+.+..++...+..+||||||| +|..|+.|+.. +.+|++||.+ +.+++.|++++... .+.....+...
T Consensus 31 ~~~~~~il~~l~l~~g~~VLDlGcG-tG~~a~~La~~----g~~V~gvD~S-~~ml~~Ar~~~~~~--~v~~~~~~~~~~ 102 (261)
T 3iv6_A 31 PSDRENDIFLENIVPGSTVAVIGAS-TRFLIEKALER----GASVTVFDFS-QRMCDDLAEALADR--CVTIDLLDITAE 102 (261)
T ss_dssp CCHHHHHHHTTTCCTTCEEEEECTT-CHHHHHHHHHT----TCEEEEEESC-HHHHHHHHHHTSSS--CCEEEECCTTSC
T ss_pred HHHHHHHHHhcCCCCcCEEEEEeCc-chHHHHHHHhc----CCEEEEEECC-HHHHHHHHHHHHhc--cceeeeeecccc
Confidence 4455555555566778899999997 99999999874 6899999999 99999999998632 22222222211
Q ss_pred hhhhcCCCccEEEEcCCCC---CccHHHHHHHHHhhcCCCCCCEEEEE
Q 042616 105 LLMGDYRGADFVLIDCNID---IDGHKNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 105 ~L~~~~~~~D~VfiD~~k~---~~~y~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
......++||+|+.+.--. ..+....++.+.+. | | ||.+++
T Consensus 103 ~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~l--L-P-GG~l~l 146 (261)
T 3iv6_A 103 IPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSL--V-G-SGTVRA 146 (261)
T ss_dssp CCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHH--H-T-TSEEEE
T ss_pred cccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHh--C-c-CcEEEE
Confidence 0112246899999987531 12445678888887 7 7 666554
No 202
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.98 E-value=1.3e-09 Score=84.65 Aligned_cols=105 Identities=12% Similarity=0.071 Sum_probs=75.2
Q ss_pred HHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhh----
Q 042616 30 EFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKL---- 105 (220)
Q Consensus 30 ~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~---- 105 (220)
+++..+....+..+|||+||| +|..+..|+....+ +.+++++|.+ + +++. .+++++++|+.+.
T Consensus 12 ~~~~~~~~~~~~~~vLd~G~G-~G~~~~~l~~~~~~-~~~v~~~D~~-~-~~~~---------~~~~~~~~d~~~~~~~~ 78 (180)
T 1ej0_A 12 EIQQSDKLFKPGMTVVDLGAA-PGGWSQYVVTQIGG-KGRIIACDLL-P-MDPI---------VGVDFLQGDFRDELVMK 78 (180)
T ss_dssp HHHHHHCCCCTTCEEEEESCT-TCHHHHHHHHHHCT-TCEEEEEESS-C-CCCC---------TTEEEEESCTTSHHHHH
T ss_pred HHHHHhCCCCCCCeEEEeCCC-CCHHHHHHHHHhCC-CCeEEEEECc-c-cccc---------CcEEEEEcccccchhhh
Confidence 333333334567899999997 89999999987644 6899999999 6 4321 5799999998764
Q ss_pred -hhh-c-CCCccEEEEcCCCCC-ccH-----------HHHHHHHHhhcCCCCCCEEEEEe
Q 042616 106 -LMG-D-YRGADFVLIDCNIDI-DGH-----------KNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 106 -L~~-~-~~~~D~VfiD~~k~~-~~y-----------~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
++. . .++||+|+.|..... ... ...++.+.+. |+| ||.+++.
T Consensus 79 ~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--L~~-gG~l~~~ 135 (180)
T 1ej0_A 79 ALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDV--LAP-GGSFVVK 135 (180)
T ss_dssp HHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHH--EEE-EEEEEEE
T ss_pred hhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHH--cCC-CcEEEEE
Confidence 111 1 368999999876411 122 5778888888 876 8877764
No 203
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.98 E-value=1.7e-09 Score=98.01 Aligned_cols=104 Identities=9% Similarity=0.087 Sum_probs=79.5
Q ss_pred hhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhcCCCcc
Q 042616 37 AGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGDYRGAD 114 (220)
Q Consensus 37 ~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~~~~~D 114 (220)
...+.+.||||||| +|..++..|++- ..+|++||.+ + +++.|+++++ ++.++|++++++++++ .+.+++|
T Consensus 80 ~~~~~k~VLDvG~G-tGiLs~~Aa~aG---A~~V~ave~s-~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~--~lpe~~D 151 (376)
T 4hc4_A 80 AALRGKTVLDVGAG-TGILSIFCAQAG---ARRVYAVEAS-A-IWQQAREVVRFNGLEDRVHVLPGPVETV--ELPEQVD 151 (376)
T ss_dssp HHHTTCEEEEETCT-TSHHHHHHHHTT---CSEEEEEECS-T-THHHHHHHHHHTTCTTTEEEEESCTTTC--CCSSCEE
T ss_pred HhcCCCEEEEeCCC-ccHHHHHHHHhC---CCEEEEEeCh-H-HHHHHHHHHHHcCCCceEEEEeeeeeee--cCCcccc
Confidence 34578999999997 999998888752 2589999999 6 7899999987 8889999999999885 2347899
Q ss_pred EEEEc---CCCCC-ccHHHHHHHHHhhcCCCCCCEEEEEec
Q 042616 115 FVLID---CNIDI-DGHKNVFRAAKESVMHGSGAGVIVGYN 151 (220)
Q Consensus 115 ~VfiD---~~k~~-~~y~~~l~~l~~~~~L~~~Ggviv~dN 151 (220)
+|+-. ..... .....++....+. |+| ||+++-+-
T Consensus 152 vivsE~~~~~l~~e~~l~~~l~a~~r~--Lkp-~G~~iP~~ 189 (376)
T 4hc4_A 152 AIVSEWMGYGLLHESMLSSVLHARTKW--LKE-GGLLLPAS 189 (376)
T ss_dssp EEECCCCBTTBTTTCSHHHHHHHHHHH--EEE-EEEEESCE
T ss_pred EEEeecccccccccchhhhHHHHHHhh--CCC-CceECCcc
Confidence 99853 22211 3456777777777 876 88877543
No 204
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.98 E-value=5.9e-10 Score=90.15 Aligned_cols=111 Identities=14% Similarity=0.096 Sum_probs=81.9
Q ss_pred HHHHHHhh-CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc
Q 042616 31 FISALAAG-NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD 109 (220)
Q Consensus 31 ~L~~La~~-~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~ 109 (220)
+...+... .+..+|||+||| +|..++.|+... ..+|+++|.+ +.+++.|++++... .+++++++|+.+. +..
T Consensus 32 ~~~~l~~~~~~~~~vLdiGcG-~G~~~~~l~~~~---~~~v~~~D~s-~~~~~~a~~~~~~~-~~i~~~~~d~~~~-~~~ 104 (215)
T 2pxx_A 32 FRALLEPELRPEDRILVLGCG-NSALSYELFLGG---FPNVTSVDYS-SVVVAAMQACYAHV-PQLRWETMDVRKL-DFP 104 (215)
T ss_dssp HHHHHGGGCCTTCCEEEETCT-TCSHHHHHHHTT---CCCEEEEESC-HHHHHHHHHHTTTC-TTCEEEECCTTSC-CSC
T ss_pred HHHHHHHhcCCCCeEEEECCC-CcHHHHHHHHcC---CCcEEEEeCC-HHHHHHHHHhcccC-CCcEEEEcchhcC-CCC
Confidence 44444433 556899999997 899999988752 1389999999 99999999998743 5799999999874 322
Q ss_pred CCCccEEEEcCCCC----------------CccHHHHHHHHHhhcCCCCCCEEEEEec
Q 042616 110 YRGADFVLIDCNID----------------IDGHKNVFRAAKESVMHGSGAGVIVGYN 151 (220)
Q Consensus 110 ~~~~D~VfiD~~k~----------------~~~y~~~l~~l~~~~~L~~~Ggviv~dN 151 (220)
.++||+|+....-+ ..+....++.+.+. |+| ||.+++-.
T Consensus 105 ~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--Lkp-gG~li~~~ 159 (215)
T 2pxx_A 105 SASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRV--LVP-GGRFISMT 159 (215)
T ss_dssp SSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHH--EEE-EEEEEEEE
T ss_pred CCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHh--CcC-CCEEEEEe
Confidence 46899999653210 02447888999998 886 77766643
No 205
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.97 E-value=3.9e-09 Score=92.60 Aligned_cols=107 Identities=15% Similarity=0.002 Sum_probs=82.7
Q ss_pred CC-CCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEE
Q 042616 20 GK-RGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFV 98 (220)
Q Consensus 20 ~~-~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v 98 (220)
+| ..+.+...+.+...+...+..+||||||| +|+.|..|+.. +++|++||.| +.+++.+++++++. ++++++
T Consensus 29 GQnfL~d~~i~~~Iv~~l~~~~~~~VLEIG~G-~G~lT~~La~~----~~~V~aVEid-~~li~~a~~~~~~~-~~v~vi 101 (295)
T 3gru_A 29 GQCFLIDKNFVNKAVESANLTKDDVVLEIGLG-KGILTEELAKN----AKKVYVIEID-KSLEPYANKLKELY-NNIEII 101 (295)
T ss_dssp -CCEECCHHHHHHHHHHTTCCTTCEEEEECCT-TSHHHHHHHHH----SSEEEEEESC-GGGHHHHHHHHHHC-SSEEEE
T ss_pred CccccCCHHHHHHHHHhcCCCCcCEEEEECCC-chHHHHHHHhc----CCEEEEEECC-HHHHHHHHHHhccC-CCeEEE
Confidence 44 35678888888777777888999999997 99999999986 5799999999 99999999998744 689999
Q ss_pred EcchhhhhhhcCCCccEEEEcCCCCCccHHHHHHHHHh
Q 042616 99 KGDAQKLLMGDYRGADFVLIDCNIDIDGHKNVFRAAKE 136 (220)
Q Consensus 99 ~gda~~~L~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~ 136 (220)
++|+.++-.. ..+||.|+.+.+- .....++..+.+
T Consensus 102 ~gD~l~~~~~-~~~fD~Iv~NlPy--~is~pil~~lL~ 136 (295)
T 3gru_A 102 WGDALKVDLN-KLDFNKVVANLPY--QISSPITFKLIK 136 (295)
T ss_dssp ESCTTTSCGG-GSCCSEEEEECCG--GGHHHHHHHHHH
T ss_pred ECchhhCCcc-cCCccEEEEeCcc--cccHHHHHHHHh
Confidence 9999874211 2479999977665 333444333333
No 206
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.96 E-value=1.8e-09 Score=84.88 Aligned_cols=100 Identities=14% Similarity=0.129 Sum_probs=78.8
Q ss_pred hhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccEE
Q 042616 37 AGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFV 116 (220)
Q Consensus 37 ~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~V 116 (220)
...+..+|||+||| +|..+..|+... .+++++|.+ +..++.|+++. .+++++.+| ++...++||+|
T Consensus 14 ~~~~~~~vLDiG~G-~G~~~~~l~~~~----~~v~~vD~s-~~~~~~a~~~~----~~v~~~~~d----~~~~~~~~D~v 79 (170)
T 3i9f_A 14 FEGKKGVIVDYGCG-NGFYCKYLLEFA----TKLYCIDIN-VIALKEVKEKF----DSVITLSDP----KEIPDNSVDFI 79 (170)
T ss_dssp HSSCCEEEEEETCT-TCTTHHHHHTTE----EEEEEECSC-HHHHHHHHHHC----TTSEEESSG----GGSCTTCEEEE
T ss_pred CcCCCCeEEEECCC-CCHHHHHHHhhc----CeEEEEeCC-HHHHHHHHHhC----CCcEEEeCC----CCCCCCceEEE
Confidence 55677899999997 899999988753 599999999 99999999982 679999999 33324789999
Q ss_pred EEcCCCC-CccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 117 LIDCNID-IDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 117 fiD~~k~-~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
+...... -.+....++.+.+. |+| ||.++.-+..
T Consensus 80 ~~~~~l~~~~~~~~~l~~~~~~--L~p-gG~l~~~~~~ 114 (170)
T 3i9f_A 80 LFANSFHDMDDKQHVISEVKRI--LKD-DGRVIIIDWR 114 (170)
T ss_dssp EEESCSTTCSCHHHHHHHHHHH--EEE-EEEEEEEEEC
T ss_pred EEccchhcccCHHHHHHHHHHh--cCC-CCEEEEEEcC
Confidence 9876541 14668889999998 886 7777665443
No 207
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.96 E-value=9.2e-10 Score=92.25 Aligned_cols=114 Identities=13% Similarity=0.039 Sum_probs=80.9
Q ss_pred ChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHH-HH---HHHHhc--ccCCcEEEE
Q 042616 25 EPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDI-DA---SKKSLG--RYANCIEFV 98 (220)
Q Consensus 25 ~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~-~~---Ar~~l~--g~~~~Ve~v 98 (220)
+-...+++..+ ..++++||||||| +|..++.||... + +.+|++||++ ++.+ +. |++++. ++ .+++++
T Consensus 11 ~~~~~~~~~~~--~~~~~~vLDiGCG-~G~~~~~la~~~-~-~~~v~GvD~s-~~~ml~~A~~A~~~~~~~~~-~~v~~~ 83 (225)
T 3p2e_A 11 DLSKDELTEII--GQFDRVHIDLGTG-DGRNIYKLAIND-Q-NTFYIGIDPV-KENLFDISKKIIKKPSKGGL-SNVVFV 83 (225)
T ss_dssp CCCHHHHHHHH--TTCSEEEEEETCT-TSHHHHHHHHTC-T-TEEEEEECSC-CGGGHHHHHHHTSCGGGTCC-SSEEEE
T ss_pred cCCHHHHHHHh--CCCCCEEEEEecc-CcHHHHHHHHhC-C-CCEEEEEeCC-HHHHHHHHHHHHHHHHHcCC-CCeEEE
Confidence 33344555433 3567899999997 999999998643 2 7899999999 5554 44 477775 55 579999
Q ss_pred Ecchhhhhhh-cCCCccEEEEcCCCC------CccHHHHHHHHHhhcCCCCCCEEEEE
Q 042616 99 KGDAQKLLMG-DYRGADFVLIDCNID------IDGHKNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 99 ~gda~~~L~~-~~~~~D~VfiD~~k~------~~~y~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
++|+.++ |. ..+.+|.+++..+-. ...+...++.+.+. |+| ||.+++
T Consensus 84 ~~d~~~l-~~~~~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~--Lkp-GG~l~i 137 (225)
T 3p2e_A 84 IAAAESL-PFELKNIADSISILFPWGTLLEYVIKPNRDILSNVADL--AKK-EAHFEF 137 (225)
T ss_dssp CCBTTBC-CGGGTTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTT--EEE-EEEEEE
T ss_pred EcCHHHh-hhhccCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHh--cCC-CcEEEE
Confidence 9999886 43 246788888765320 01345678999998 887 888777
No 208
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.94 E-value=6.3e-09 Score=92.68 Aligned_cols=107 Identities=10% Similarity=-0.006 Sum_probs=81.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhh-hhcCCCccE
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLL-MGDYRGADF 115 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L-~~~~~~~D~ 115 (220)
.++++||||||| +|..+..|++..+ +.+++.+|. +..++.|++++. ++.++|+++.+|..+.- | +.++||+
T Consensus 178 ~~~~~vlDvG~G-~G~~~~~l~~~~p--~~~~~~~D~--~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~p~~~D~ 251 (363)
T 3dp7_A 178 HHPKRLLDIGGN-TGKWATQCVQYNK--EVEVTIVDL--PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVP-FPTGFDA 251 (363)
T ss_dssp GCCSEEEEESCT-TCHHHHHHHHHST--TCEEEEEEC--HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCC-CCCCCSE
T ss_pred cCCCEEEEeCCC-cCHHHHHHHHhCC--CCEEEEEeC--HHHHHHHHHHHHhcCcccceEEEEccccccCCC-CCCCcCE
Confidence 577999999996 9999999998865 579999997 789999999987 56678999999997741 1 1258999
Q ss_pred EEEcCCCC---CccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 116 VLIDCNID---IDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 116 VfiD~~k~---~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
|++-.--. ..+...+++.+.+. |+|.|-+++.+.+.
T Consensus 252 v~~~~vlh~~~~~~~~~~l~~~~~~--L~pgG~l~i~e~~~ 290 (363)
T 3dp7_A 252 VWMSQFLDCFSEEEVISILTRVAQS--IGKDSKVYIMETLW 290 (363)
T ss_dssp EEEESCSTTSCHHHHHHHHHHHHHH--CCTTCEEEEEECCT
T ss_pred EEEechhhhCCHHHHHHHHHHHHHh--cCCCcEEEEEeecc
Confidence 99854331 03345779999998 88744445555444
No 209
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.93 E-value=9.8e-10 Score=94.71 Aligned_cols=88 Identities=14% Similarity=0.104 Sum_probs=70.0
Q ss_pred HHHHHHHHhhCCC--CEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc---------c-cCCcEE
Q 042616 29 GEFISALAAGNNA--QLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG---------R-YANCIE 96 (220)
Q Consensus 29 ~~~L~~La~~~~a--~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~---------g-~~~~Ve 96 (220)
.+.+...+...+. .+|||++|| +|..|+.||.. +++|++||.+ +..++.++++++ + +.++++
T Consensus 75 ~e~l~~al~l~~g~~~~VLDl~~G-~G~dal~lA~~----g~~V~~vE~~-~~~~~l~~~~l~~a~~~~~~~~~l~~~i~ 148 (258)
T 2oyr_A 75 GEAVAKAVGIKGDYLPDVVDATAG-LGRDAFVLASV----GCRVRMLERN-PVVAALLDDGLARGYADAEIGGWLQERLQ 148 (258)
T ss_dssp GSHHHHHTTCBTTBCCCEEETTCT-TCHHHHHHHHH----TCCEEEEECC-HHHHHHHHHHHHHHHHCTTTHHHHHHHEE
T ss_pred HHHHHHHhcccCCCCCEEEEcCCc-CCHHHHHHHHc----CCEEEEEECC-HHHHHHHHHHHHHHHhhHhhhhhhhcCEE
Confidence 3444444455555 799999996 99999999985 6799999999 988777777764 2 335799
Q ss_pred EEEcchhhhhhhcCCCccEEEEcCCC
Q 042616 97 FVKGDAQKLLMGDYRGADFVLIDCNI 122 (220)
Q Consensus 97 ~v~gda~~~L~~~~~~~D~VfiD~~k 122 (220)
++++|+.++++.+..+||+||+|+..
T Consensus 149 ~~~~D~~~~L~~~~~~fDvV~lDP~y 174 (258)
T 2oyr_A 149 LIHASSLTALTDITPRPQVVYLDPMF 174 (258)
T ss_dssp EEESCHHHHSTTCSSCCSEEEECCCC
T ss_pred EEECCHHHHHHhCcccCCEEEEcCCC
Confidence 99999999987665679999999865
No 210
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.92 E-value=3e-09 Score=98.95 Aligned_cols=99 Identities=7% Similarity=0.044 Sum_probs=76.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhcCCCccEE
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGDYRGADFV 116 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~~~~~D~V 116 (220)
.+.++||||||| +|..++.++.. ...+|++||.+ + +++.|+++++ ++.++|+++++|+.+.- +.++||+|
T Consensus 157 ~~~~~VLDiGcG-tG~la~~la~~---~~~~V~gvD~s-~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~--~~~~fD~I 228 (480)
T 3b3j_A 157 FKDKIVLDVGCG-SGILSFFAAQA---GARKIYAVEAS-T-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS--LPEQVDII 228 (480)
T ss_dssp TTTCEEEEESCS-TTHHHHHHHHT---TCSEEEEEECH-H-HHHHHHHHHHHTTCTTTEEEEESCTTTCC--CSSCEEEE
T ss_pred cCCCEEEEecCc-ccHHHHHHHHc---CCCEEEEEEcH-H-HHHHHHHHHHHcCCCCcEEEEECchhhCc--cCCCeEEE
Confidence 467899999997 99999988863 14699999999 7 8999999987 77788999999998842 23689999
Q ss_pred EEcCCC---CCccHHHHHHHHHhhcCCCCCCEEEE
Q 042616 117 LIDCNI---DIDGHKNVFRAAKESVMHGSGAGVIV 148 (220)
Q Consensus 117 fiD~~k---~~~~y~~~l~~l~~~~~L~~~Ggviv 148 (220)
+.+..- ..+.+.+.+..+.+. |+| ||+++
T Consensus 229 vs~~~~~~~~~e~~~~~l~~~~~~--Lkp-gG~li 260 (480)
T 3b3j_A 229 ISEPMGYMLFNERMLESYLHAKKY--LKP-SGNMF 260 (480)
T ss_dssp ECCCCHHHHTCHHHHHHHHHGGGG--EEE-EEEEE
T ss_pred EEeCchHhcCcHHHHHHHHHHHHh--cCC-CCEEE
Confidence 987541 013445566666777 876 88877
No 211
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.91 E-value=3.2e-09 Score=86.27 Aligned_cols=97 Identities=11% Similarity=0.054 Sum_probs=76.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccEEEEc
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFVLID 119 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~VfiD 119 (220)
+..+|||+||| +|..+..| . ..+++++|++ +.+++.|++++ .+++++++|+.+. +...++||+|+..
T Consensus 36 ~~~~vLdiG~G-~G~~~~~l-----~-~~~v~~vD~s-~~~~~~a~~~~----~~~~~~~~d~~~~-~~~~~~fD~v~~~ 102 (211)
T 2gs9_A 36 PGESLLEVGAG-TGYWLRRL-----P-YPQKVGVEPS-EAMLAVGRRRA----PEATWVRAWGEAL-PFPGESFDVVLLF 102 (211)
T ss_dssp CCSEEEEETCT-TCHHHHHC-----C-CSEEEEECCC-HHHHHHHHHHC----TTSEEECCCTTSC-CSCSSCEEEEEEE
T ss_pred CCCeEEEECCC-CCHhHHhC-----C-CCeEEEEeCC-HHHHHHHHHhC----CCcEEEEcccccC-CCCCCcEEEEEEc
Confidence 67899999997 89988766 1 2399999999 99999999987 5789999998773 3324689999987
Q ss_pred CCCC-CccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 120 CNID-IDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 120 ~~k~-~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
.... -.+....++.+.+. |+| ||.+++...
T Consensus 103 ~~l~~~~~~~~~l~~~~~~--L~p-gG~l~i~~~ 133 (211)
T 2gs9_A 103 TTLEFVEDVERVLLEARRV--LRP-GGALVVGVL 133 (211)
T ss_dssp SCTTTCSCHHHHHHHHHHH--EEE-EEEEEEEEE
T ss_pred ChhhhcCCHHHHHHHHHHH--cCC-CCEEEEEec
Confidence 6541 14678899999998 886 887776543
No 212
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.91 E-value=6.7e-09 Score=91.18 Aligned_cols=109 Identities=14% Similarity=0.206 Sum_probs=85.9
Q ss_pred HHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc----c-c-CCcEEEEEcchhhhhhh
Q 042616 35 LAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG----R-Y-ANCIEFVKGDAQKLLMG 108 (220)
Q Consensus 35 La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~----g-~-~~~Ve~v~gda~~~L~~ 108 (220)
|+...+|++||-||.| .|..+-.+++- +...+|+.||+| ++.++.||+++. + + ..+++++.+|+.+++..
T Consensus 78 l~~~p~pk~VLIiGgG-dG~~~revlk~--~~v~~v~~VEID-~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~ 153 (294)
T 3o4f_A 78 LLAHGHAKHVLIIGGG-DGAMLREVTRH--KNVESITMVEID-AGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ 153 (294)
T ss_dssp HHHSSCCCEEEEESCT-TSHHHHHHHTC--TTCCEEEEEESC-HHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSC
T ss_pred HhhCCCCCeEEEECCC-chHHHHHHHHc--CCcceEEEEcCC-HHHHHHHHhcCccccccccCCCcEEEEechHHHHHhh
Confidence 4445679999999954 78776666653 225799999999 999999999983 2 2 36799999999999976
Q ss_pred cCCCccEEEEcCCCCC----ccH-HHHHHHHHhhcCCCCCCEEEEEe
Q 042616 109 DYRGADFVLIDCNIDI----DGH-KNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 109 ~~~~~D~VfiD~~k~~----~~y-~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
..+.||+|++|..... ..| .++++.+.+. |+| ||++++.
T Consensus 154 ~~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~--L~p-~Gv~v~q 197 (294)
T 3o4f_A 154 TSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRC--LNP-GGIFVAQ 197 (294)
T ss_dssp SSCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHT--EEE-EEEEEEE
T ss_pred ccccCCEEEEeCCCcCCCchhhcCHHHHHHHHHH--hCC-CCEEEEe
Confidence 6688999999986411 233 6789999998 876 9999985
No 213
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.91 E-value=2.2e-08 Score=86.29 Aligned_cols=107 Identities=8% Similarity=-0.005 Sum_probs=78.6
Q ss_pred CCCCEEEEEcCCch---HHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhh---------
Q 042616 39 NNAQLIVMACSSIA---VSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLL--------- 106 (220)
Q Consensus 39 ~~a~~ILEIGtg~~---G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L--------- 106 (220)
.+..+||||||| + |..+..++...+ +++|+.||.+ +.+++.||+++... ++++++++|..+.-
T Consensus 76 ~~~~~vLDlGcG-~pt~G~~~~~~~~~~p--~~~v~~vD~s-p~~l~~Ar~~~~~~-~~v~~~~~D~~~~~~~~~~~~~~ 150 (274)
T 2qe6_A 76 AGISQFLDLGSG-LPTVQNTHEVAQSVNP--DARVVYVDID-PMVLTHGRALLAKD-PNTAVFTADVRDPEYILNHPDVR 150 (274)
T ss_dssp TCCCEEEEETCC-SCCSSCHHHHHHHHCT--TCEEEEEESS-HHHHHHHHHHHTTC-TTEEEEECCTTCHHHHHHSHHHH
T ss_pred cCCCEEEEECCC-CCCCChHHHHHHHhCC--CCEEEEEECC-hHHHHHHHHhcCCC-CCeEEEEeeCCCchhhhccchhh
Confidence 456899999997 8 977665554433 6899999999 99999999998632 57999999986531
Q ss_pred hhc-CCCccEEEEcCCC---CCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 107 MGD-YRGADFVLIDCNI---DIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 107 ~~~-~~~~D~VfiD~~k---~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
..+ ..+||+|++-.-. ...+...+++.+.+. |+| ||.+++.+..
T Consensus 151 ~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~--L~p-GG~l~i~~~~ 198 (274)
T 2qe6_A 151 RMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDA--LAP-GSYLFMTSLV 198 (274)
T ss_dssp HHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHH--SCT-TCEEEEEEEB
T ss_pred ccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHh--CCC-CcEEEEEEec
Confidence 112 2579999976532 113467899999998 886 7776665444
No 214
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.90 E-value=5.6e-09 Score=86.87 Aligned_cols=112 Identities=10% Similarity=-0.033 Sum_probs=82.7
Q ss_pred HHHHHHHHh-hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhh
Q 042616 29 GEFISALAA-GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLM 107 (220)
Q Consensus 29 ~~~L~~La~-~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~ 107 (220)
.+.+..+.. ..+..+|||+||| +|..+..|+... .+|++||.+ +.+++.|++++.. .+++++++|+.+.-.
T Consensus 44 ~~~~~~~~~~~~~~~~vLD~GcG-~G~~~~~la~~~----~~v~gvD~s-~~~~~~a~~~~~~--~~~~~~~~d~~~~~~ 115 (245)
T 3ggd_A 44 VVDLPRFELLFNPELPLIDFACG-NGTQTKFLSQFF----PRVIGLDVS-KSALEIAAKENTA--ANISYRLLDGLVPEQ 115 (245)
T ss_dssp HHHHHHHTTTSCTTSCEEEETCT-TSHHHHHHHHHS----SCEEEEESC-HHHHHHHHHHSCC--TTEEEEECCTTCHHH
T ss_pred HHHHHHHhhccCCCCeEEEEcCC-CCHHHHHHHHhC----CCEEEEECC-HHHHHHHHHhCcc--cCceEEECccccccc
Confidence 444444443 3456789999997 999999999863 489999999 9999999998842 479999999977432
Q ss_pred hc----CCCccEEEEcCCCCC---ccHHHHHHHHHhhcCCCCCCEE-EEEec
Q 042616 108 GD----YRGADFVLIDCNIDI---DGHKNVFRAAKESVMHGSGAGV-IVGYN 151 (220)
Q Consensus 108 ~~----~~~~D~VfiD~~k~~---~~y~~~l~~l~~~~~L~~~Ggv-iv~dN 151 (220)
.. ...||+|+...-... .+...+++.+.+. |+| ||. ++++.
T Consensus 116 ~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~--Lkp-gG~l~i~~~ 164 (245)
T 3ggd_A 116 AAQIHSEIGDANIYMRTGFHHIPVEKRELLGQSLRIL--LGK-QGAMYLIEL 164 (245)
T ss_dssp HHHHHHHHCSCEEEEESSSTTSCGGGHHHHHHHHHHH--HTT-TCEEEEEEE
T ss_pred ccccccccCccEEEEcchhhcCCHHHHHHHHHHHHHH--cCC-CCEEEEEeC
Confidence 11 135899998864411 3567899999998 887 665 66654
No 215
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.90 E-value=5.4e-09 Score=86.78 Aligned_cols=115 Identities=7% Similarity=-0.034 Sum_probs=81.5
Q ss_pred hhHHHHHHHHHhh-CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcch
Q 042616 26 PDVGEFISALAAG-NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDA 102 (220)
Q Consensus 26 p~~~~~L~~La~~-~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda 102 (220)
|.--+|....... .++.+|||+||| +|..++.++...+. .+++++|.| +.+++.++++++ |..+++++ .|.
T Consensus 34 p~ld~fY~~~~~~l~~~~~VLDlGCG-~GplAl~l~~~~p~--a~~~A~Di~-~~~leiar~~~~~~g~~~~v~~--~d~ 107 (200)
T 3fzg_A 34 ATLNDFYTYVFGNIKHVSSILDFGCG-FNPLALYQWNENEK--IIYHAYDID-RAEIAFLSSIIGKLKTTIKYRF--LNK 107 (200)
T ss_dssp GGHHHHHHHHHHHSCCCSEEEEETCT-THHHHHHHHCSSCC--CEEEEECSC-HHHHHHHHHHHHHSCCSSEEEE--ECC
T ss_pred HhHHHHHHHHHhhcCCCCeEEEecCC-CCHHHHHHHhcCCC--CEEEEEeCC-HHHHHHHHHHHHhcCCCccEEE--ecc
Confidence 7777787775554 558999999997 99999999877664 599999999 999999999997 66557777 555
Q ss_pred hhhhhhcCCCccEEEEcCCCCCccH---HHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 103 QKLLMGDYRGADFVLIDCNIDIDGH---KNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 103 ~~~L~~~~~~~D~VfiD~~k~~~~y---~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
.+..+ .++||+|+.---- ... ...+..+... |+| ||++|.-.+-
T Consensus 108 ~~~~~--~~~~DvVLa~k~L--HlL~~~~~al~~v~~~--L~p-ggvfISfptk 154 (200)
T 3fzg_A 108 ESDVY--KGTYDVVFLLKML--PVLKQQDVNILDFLQL--FHT-QNFVISFPIK 154 (200)
T ss_dssp HHHHT--TSEEEEEEEETCH--HHHHHTTCCHHHHHHT--CEE-EEEEEEEECC
T ss_pred cccCC--CCCcChhhHhhHH--HhhhhhHHHHHHHHHH--hCC-CCEEEEeChH
Confidence 55443 4789999843221 100 0112234444 666 8888876643
No 216
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.89 E-value=1e-08 Score=86.58 Aligned_cols=96 Identities=14% Similarity=0.131 Sum_probs=74.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccEEEEc
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFVLID 119 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~VfiD 119 (220)
++.+||||||| +|..+..|+.. +.+|+++|++ +.+++.|+++... + ++++|+.+. +...++||+|+..
T Consensus 54 ~~~~vLDiGcG-~G~~~~~l~~~----~~~v~gvD~s-~~~l~~a~~~~~~---~--~~~~d~~~~-~~~~~~fD~v~~~ 121 (260)
T 2avn_A 54 NPCRVLDLGGG-TGKWSLFLQER----GFEVVLVDPS-KEMLEVAREKGVK---N--VVEAKAEDL-PFPSGAFEAVLAL 121 (260)
T ss_dssp SCCEEEEETCT-TCHHHHHHHTT----TCEEEEEESC-HHHHHHHHHHTCS---C--EEECCTTSC-CSCTTCEEEEEEC
T ss_pred CCCeEEEeCCC-cCHHHHHHHHc----CCeEEEEeCC-HHHHHHHHhhcCC---C--EEECcHHHC-CCCCCCEEEEEEc
Confidence 67899999997 99999988864 6799999999 9999999988652 2 888998773 3224689999986
Q ss_pred CCC-C-CccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 120 CNI-D-IDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 120 ~~k-~-~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
... . ..+....++.+.+. |+| ||.+++.
T Consensus 122 ~~~~~~~~~~~~~l~~~~~~--Lkp-gG~l~~~ 151 (260)
T 2avn_A 122 GDVLSYVENKDKAFSEIRRV--LVP-DGLLIAT 151 (260)
T ss_dssp SSHHHHCSCHHHHHHHHHHH--EEE-EEEEEEE
T ss_pred chhhhccccHHHHHHHHHHH--cCC-CeEEEEE
Confidence 532 0 03467889999998 886 8887764
No 217
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.89 E-value=3.4e-09 Score=93.80 Aligned_cols=115 Identities=13% Similarity=0.087 Sum_probs=84.2
Q ss_pred HHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhh
Q 042616 29 GEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMG 108 (220)
Q Consensus 29 ~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~ 108 (220)
.+++.......+..+|||+||| +|..++.|+...+ ..+|+++|.+ +.+++.|++++....-.++++.+|+.+..
T Consensus 185 ~~~ll~~l~~~~~~~VLDlGcG-~G~~~~~la~~~~--~~~v~~vD~s-~~~l~~a~~~~~~~~~~~~~~~~d~~~~~-- 258 (343)
T 2pjd_A 185 SQLLLSTLTPHTKGKVLDVGCG-AGVLSVAFARHSP--KIRLTLCDVS-APAVEASRATLAANGVEGEVFASNVFSEV-- 258 (343)
T ss_dssp HHHHHHHSCTTCCSBCCBTTCT-TSHHHHHHHHHCT--TCBCEEEESB-HHHHHHHHHHHHHTTCCCEEEECSTTTTC--
T ss_pred HHHHHHhcCcCCCCeEEEecCc-cCHHHHHHHHHCC--CCEEEEEECC-HHHHHHHHHHHHHhCCCCEEEEccccccc--
Confidence 3444443334456789999997 9999999998754 4699999999 99999999999722123678999987754
Q ss_pred cCCCccEEEEcCCCCC------ccHHHHHHHHHhhcCCCCCCEE-EEEecCC
Q 042616 109 DYRGADFVLIDCNIDI------DGHKNVFRAAKESVMHGSGAGV-IVGYNAL 153 (220)
Q Consensus 109 ~~~~~D~VfiD~~k~~------~~y~~~l~~l~~~~~L~~~Ggv-iv~dNv~ 153 (220)
.++||+|+.+..-.. ......++.+.+. |+| ||. ++..|..
T Consensus 259 -~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~--Lkp-gG~l~i~~~~~ 306 (343)
T 2pjd_A 259 -KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRH--LNS-GGELRIVANAF 306 (343)
T ss_dssp -CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGG--EEE-EEEEEEEEETT
T ss_pred -cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHh--CCC-CcEEEEEEcCC
Confidence 468999999876521 2346778888998 887 555 4545544
No 218
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.89 E-value=1.8e-09 Score=90.26 Aligned_cols=106 Identities=16% Similarity=0.110 Sum_probs=79.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCC-cEEEEEeCCchhHHHHHHHHhcccC-------------------------
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTG-GRVVCILSGVIGDIDASKKSLGRYA------------------------- 92 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~-grV~tIE~d~~~~~~~Ar~~l~g~~------------------------- 92 (220)
.++++|||+||| +|..++.++.. + .+|+++|.+ +.+++.|++++....
T Consensus 55 ~~~~~vLDlGcG-~G~~~~~l~~~----~~~~v~gvD~s-~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (265)
T 2i62_A 55 VKGELLIDIGSG-PTIYQLLSACE----SFTEIIVSDYT-DQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEK 128 (265)
T ss_dssp CCEEEEEEESCT-TCCGGGTTGGG----TEEEEEEEESC-HHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHH
T ss_pred cCCCEEEEECCC-ccHHHHHHhhc----ccCeEEEecCC-HHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHH
Confidence 456889999997 89988877753 3 489999999 999999999886211
Q ss_pred -----CcE-EEEEcchhhhhhhcC---CCccEEEEcCCCC-----CccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 93 -----NCI-EFVKGDAQKLLMGDY---RGADFVLIDCNID-----IDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 93 -----~~V-e~v~gda~~~L~~~~---~~~D~VfiD~~k~-----~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
+++ +++++|+.+..+... ++||+|+.-.... ..++...++.+.+. |+| ||.+++...+
T Consensus 129 ~~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~--Lkp-gG~li~~~~~ 200 (265)
T 2i62_A 129 EEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSL--LKP-GGFLVMVDAL 200 (265)
T ss_dssp HHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTT--EEE-EEEEEEEEES
T ss_pred HHHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhh--CCC-CcEEEEEecC
Confidence 138 999999987644223 6899999765430 12567888999988 886 8887776544
No 219
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.88 E-value=1.6e-08 Score=87.58 Aligned_cols=113 Identities=17% Similarity=0.094 Sum_probs=83.8
Q ss_pred CCCCChhhhHHHHHHHHhc------CCC-CCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEE
Q 042616 1 MSSWSSENATKAYLQALKM------GKR-GKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCI 73 (220)
Q Consensus 1 ~~~w~~e~a~~aY~~~l~~------~~~-~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tI 73 (220)
|..-..-..+.+.++.... +|. .+.+...+-+...+...+. +||||||| +|..|..|+.. +++|++|
T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~k~~GQnfL~d~~i~~~Iv~~~~~~~~-~VLEIG~G-~G~lt~~L~~~----~~~V~av 74 (271)
T 3fut_A 1 MSKLASPQSVRALLERHGLFADKRFGQNFLVSEAHLRRIVEAARPFTG-PVFEVGPG-LGALTRALLEA----GAEVTAI 74 (271)
T ss_dssp ----CCHHHHHHHHHHTTCCCSTTSSCCEECCHHHHHHHHHHHCCCCS-CEEEECCT-TSHHHHHHHHT----TCCEEEE
T ss_pred CccccCHHHHHHHHHhcCCCccccCCccccCCHHHHHHHHHhcCCCCC-eEEEEeCc-hHHHHHHHHHc----CCEEEEE
Confidence 3333333456667776432 444 4678888888887777777 99999997 99999999985 5799999
Q ss_pred eCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccEEEEcCCC
Q 042616 74 LSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFVLIDCNI 122 (220)
Q Consensus 74 E~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~VfiD~~k 122 (220)
|.| +.+++.+++++.+ +++++++||+.++-......+|.|+-..+-
T Consensus 75 Eid-~~~~~~l~~~~~~--~~v~vi~~D~l~~~~~~~~~~~~iv~NlPy 120 (271)
T 3fut_A 75 EKD-LRLRPVLEETLSG--LPVRLVFQDALLYPWEEVPQGSLLVANLPY 120 (271)
T ss_dssp ESC-GGGHHHHHHHTTT--SSEEEEESCGGGSCGGGSCTTEEEEEEECS
T ss_pred ECC-HHHHHHHHHhcCC--CCEEEEECChhhCChhhccCccEEEecCcc
Confidence 999 9999999999873 589999999988532212368888877665
No 220
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.88 E-value=1.6e-08 Score=87.55 Aligned_cols=104 Identities=15% Similarity=0.057 Sum_probs=81.8
Q ss_pred CCCC-CChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEE
Q 042616 20 GKRG-KEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIE 96 (220)
Q Consensus 20 ~~~~-~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve 96 (220)
++.+ ..+...+.+...+...+..+||||||| +|..|..|+.. +++|++||.| +.+++.+++++. +..++++
T Consensus 7 gq~fl~d~~i~~~i~~~~~~~~~~~VLDiG~G-~G~lt~~L~~~----~~~v~~vD~~-~~~~~~a~~~~~~~~~~~~v~ 80 (285)
T 1zq9_A 7 GQHILKNPLIINSIIDKAALRPTDVVLEVGPG-TGNMTVKLLEK----AKKVVACELD-PRLVAELHKRVQGTPVASKLQ 80 (285)
T ss_dssp -CCEECCHHHHHHHHHHTCCCTTCEEEEECCT-TSTTHHHHHHH----SSEEEEEESC-HHHHHHHHHHHTTSTTGGGEE
T ss_pred CcCccCCHHHHHHHHHhcCCCCCCEEEEEcCc-ccHHHHHHHhh----CCEEEEEECC-HHHHHHHHHHHHhcCCCCceE
Confidence 4554 578888888777777788999999997 99999999986 5799999999 999999999986 4446899
Q ss_pred EEEcchhhhhhhcCCCccEEEEcCCCCCccHHHHHHHH
Q 042616 97 FVKGDAQKLLMGDYRGADFVLIDCNIDIDGHKNVFRAA 134 (220)
Q Consensus 97 ~v~gda~~~L~~~~~~~D~VfiD~~k~~~~y~~~l~~l 134 (220)
++++|+.+. + ...||.|+.+.+- ....+.+..+
T Consensus 81 ~~~~D~~~~-~--~~~fD~vv~nlpy--~~~~~~~~~~ 113 (285)
T 1zq9_A 81 VLVGDVLKT-D--LPFFDTCVANLPY--QISSPFVFKL 113 (285)
T ss_dssp EEESCTTTS-C--CCCCSEEEEECCG--GGHHHHHHHH
T ss_pred EEEcceecc-c--chhhcEEEEecCc--ccchHHHHHH
Confidence 999999874 2 2479999998776 4444444333
No 221
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.88 E-value=1.5e-08 Score=90.43 Aligned_cols=105 Identities=20% Similarity=0.147 Sum_probs=80.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhcCCCccEE
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGDYRGADFV 116 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~~~~~D~V 116 (220)
.+..+|||+||| +|..+..|++..+ +.+++.+|. +..++.|++++. ++.++|+++.+|..+.+| .+||+|
T Consensus 201 ~~~~~vlDvG~G-~G~~~~~l~~~~p--~~~~~~~D~--~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p---~~~D~v 272 (369)
T 3gwz_A 201 SGAATAVDIGGG-RGSLMAAVLDAFP--GLRGTLLER--PPVAEEARELLTGRGLADRCEILPGDFFETIP---DGADVY 272 (369)
T ss_dssp TTCSEEEEETCT-TSHHHHHHHHHCT--TCEEEEEEC--HHHHHHHHHHHHHTTCTTTEEEEECCTTTCCC---SSCSEE
T ss_pred ccCcEEEEeCCC-ccHHHHHHHHHCC--CCeEEEEcC--HHHHHHHHHhhhhcCcCCceEEeccCCCCCCC---CCceEE
Confidence 457899999996 9999999998865 579999999 789999999886 667889999999985443 379999
Q ss_pred EEcCCCCC---ccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 117 LIDCNIDI---DGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 117 fiD~~k~~---~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
|+-.-... .....+++.+.+. |+|.|-+++.+.+.
T Consensus 273 ~~~~vlh~~~d~~~~~~L~~~~~~--L~pgG~l~i~e~~~ 310 (369)
T 3gwz_A 273 LIKHVLHDWDDDDVVRILRRIATA--MKPDSRLLVIDNLI 310 (369)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHTT--CCTTCEEEEEEEBC
T ss_pred EhhhhhccCCHHHHHHHHHHHHHH--cCCCCEEEEEEecc
Confidence 98553311 2234689999998 88744445555444
No 222
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.87 E-value=2.2e-09 Score=98.24 Aligned_cols=75 Identities=13% Similarity=0.100 Sum_probs=65.3
Q ss_pred CCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc----ccCCcEEEEEcchhhhhhhc-CCCccE
Q 042616 41 AQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG----RYANCIEFVKGDAQKLLMGD-YRGADF 115 (220)
Q Consensus 41 a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~----g~~~~Ve~v~gda~~~L~~~-~~~~D~ 115 (220)
.++|||+||| +|+.+++||.. +++|++||.| +.+++.|++|++ ++ ++|+++++|+.++++.. ..+||+
T Consensus 94 g~~VLDLgcG-~G~~al~LA~~----g~~V~~VD~s-~~~l~~Ar~N~~~~~~gl-~~i~~i~~Da~~~L~~~~~~~fDv 166 (410)
T 3ll7_A 94 GTKVVDLTGG-LGIDFIALMSK----ASQGIYIERN-DETAVAARHNIPLLLNEG-KDVNILTGDFKEYLPLIKTFHPDY 166 (410)
T ss_dssp TCEEEESSCS-SSHHHHHHHTT----CSEEEEEESC-HHHHHHHHHHHHHHSCTT-CEEEEEESCGGGSHHHHHHHCCSE
T ss_pred CCEEEEeCCC-chHHHHHHHhc----CCEEEEEECC-HHHHHHHHHhHHHhccCC-CcEEEEECcHHHhhhhccCCCceE
Confidence 6899999997 99999988864 6799999999 999999999997 44 68999999999987643 258999
Q ss_pred EEEcCCC
Q 042616 116 VLIDCNI 122 (220)
Q Consensus 116 VfiD~~k 122 (220)
||+|.+.
T Consensus 167 V~lDPPr 173 (410)
T 3ll7_A 167 IYVDPAR 173 (410)
T ss_dssp EEECCEE
T ss_pred EEECCCC
Confidence 9999876
No 223
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.87 E-value=8.4e-09 Score=88.51 Aligned_cols=95 Identities=12% Similarity=0.020 Sum_probs=76.0
Q ss_pred CCC-CCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEE
Q 042616 20 GKR-GKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFV 98 (220)
Q Consensus 20 ~~~-~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v 98 (220)
+|. .+.+...+.+...+...+..+||||||| +|+.|..|+.. +++|++||.| +.+++.+++++... ++++++
T Consensus 8 GQnFL~d~~i~~~iv~~~~~~~~~~VLEIG~G-~G~lt~~La~~----~~~V~avEid-~~~~~~~~~~~~~~-~~v~~i 80 (255)
T 3tqs_A 8 GQHFLHDSFVLQKIVSAIHPQKTDTLVEIGPG-RGALTDYLLTE----CDNLALVEID-RDLVAFLQKKYNQQ-KNITIY 80 (255)
T ss_dssp -CCEECCHHHHHHHHHHHCCCTTCEEEEECCT-TTTTHHHHTTT----SSEEEEEECC-HHHHHHHHHHHTTC-TTEEEE
T ss_pred CcccccCHHHHHHHHHhcCCCCcCEEEEEccc-ccHHHHHHHHh----CCEEEEEECC-HHHHHHHHHHHhhC-CCcEEE
Confidence 554 4678888888888888888999999997 99999999874 5799999999 99999999998753 689999
Q ss_pred Ecchhhh-hhhc--CCCccEEEEcCCC
Q 042616 99 KGDAQKL-LMGD--YRGADFVLIDCNI 122 (220)
Q Consensus 99 ~gda~~~-L~~~--~~~~D~VfiD~~k 122 (220)
++|+.++ ++.+ ..+|| |+-+.+-
T Consensus 81 ~~D~~~~~~~~~~~~~~~~-vv~NlPY 106 (255)
T 3tqs_A 81 QNDALQFDFSSVKTDKPLR-VVGNLPY 106 (255)
T ss_dssp ESCTTTCCGGGSCCSSCEE-EEEECCH
T ss_pred EcchHhCCHHHhccCCCeE-EEecCCc
Confidence 9999886 3443 24688 6655543
No 224
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.87 E-value=2.7e-08 Score=86.26 Aligned_cols=104 Identities=14% Similarity=0.141 Sum_probs=78.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcc--------cCCcEEEEEcchhhhh-----
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGR--------YANCIEFVKGDAQKLL----- 106 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g--------~~~~Ve~v~gda~~~L----- 106 (220)
++.+|||+||| +|..+..|+.. . +.+++++|++ +.+++.|++++.. ...+++++++|+.+..
T Consensus 34 ~~~~VLDlGcG-~G~~~~~l~~~--~-~~~v~gvD~s-~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 108 (313)
T 3bgv_A 34 RDITVLDLGCG-KGGDLLKWKKG--R-INKLVCTDIA-DVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKF 108 (313)
T ss_dssp -CCEEEEETCT-TTTTHHHHHHT--T-CSEEEEEESC-HHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTC
T ss_pred CCCEEEEECCC-CcHHHHHHHhc--C-CCEEEEEeCC-HHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhc
Confidence 67899999997 99999988863 2 6799999999 9999999998762 2347999999998752
Q ss_pred hhcCCCccEEEEcCCCCC-----ccHHHHHHHHHhhcCCCCCCEEEEEec
Q 042616 107 MGDYRGADFVLIDCNIDI-----DGHKNVFRAAKESVMHGSGAGVIVGYN 151 (220)
Q Consensus 107 ~~~~~~~D~VfiD~~k~~-----~~y~~~l~~l~~~~~L~~~Ggviv~dN 151 (220)
+...++||+|+....... .+....++.+.+. |+| ||++++..
T Consensus 109 ~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~--Lkp-gG~li~~~ 155 (313)
T 3bgv_A 109 RDPQMCFDICSCQFVCHYSFESYEQADMMLRNACER--LSP-GGYFIGTT 155 (313)
T ss_dssp SSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTT--EEE-EEEEEEEE
T ss_pred ccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHH--hCC-CcEEEEec
Confidence 111248999997654310 2335788999988 876 88887753
No 225
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.86 E-value=8.6e-09 Score=87.04 Aligned_cols=109 Identities=12% Similarity=0.019 Sum_probs=78.9
Q ss_pred CChhHHHHHHHHHhh--CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcc
Q 042616 24 KEPDVGEFISALAAG--NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGD 101 (220)
Q Consensus 24 ~~p~~~~~L~~La~~--~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gd 101 (220)
..|-...+...+... .+..+||||||| +|..+..|+...+ +.+|+++|++ +.+++.|+++. .+++++.+|
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~--~~~v~~vD~s-~~~~~~a~~~~----~~~~~~~~d 138 (269)
T 1p91_A 67 YQPLRDAIVAQLRERLDDKATAVLDIGCG-EGYYTHAFADALP--EITTFGLDVS-KVAIKAAAKRY----PQVTFCVAS 138 (269)
T ss_dssp THHHHHHHHHHHHHHSCTTCCEEEEETCT-TSTTHHHHHHTCT--TSEEEEEESC-HHHHHHHHHHC----TTSEEEECC
T ss_pred cHHHHHHHHHHHHHhcCCCCCEEEEECCC-CCHHHHHHHHhCC--CCeEEEEeCC-HHHHHHHHHhC----CCcEEEEcc
Confidence 334334444444443 467899999997 8999999998763 6799999999 99999999875 468999999
Q ss_pred hhhhhhhcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 102 AQKLLMGDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 102 a~~~L~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
+.+. +...++||+|+.-... . .++.+.+. |+| ||.+++-
T Consensus 139 ~~~~-~~~~~~fD~v~~~~~~--~----~l~~~~~~--L~p-gG~l~~~ 177 (269)
T 1p91_A 139 SHRL-PFSDTSMDAIIRIYAP--C----KAEELARV--VKP-GGWVITA 177 (269)
T ss_dssp TTSC-SBCTTCEEEEEEESCC--C----CHHHHHHH--EEE-EEEEEEE
T ss_pred hhhC-CCCCCceeEEEEeCCh--h----hHHHHHHh--cCC-CcEEEEE
Confidence 8763 3324689999975544 3 35677777 776 6665543
No 226
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.85 E-value=1.1e-08 Score=89.56 Aligned_cols=104 Identities=17% Similarity=0.088 Sum_probs=79.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhcCCCccEEE
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGDYRGADFVL 117 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~~~~~D~Vf 117 (220)
+..+||||||| +|..+..|++..+ +.+++.+|. +..++.|++++. ++.++|+++.+|..+.+| .+||+|+
T Consensus 169 ~~~~vlDvG~G-~G~~~~~l~~~~p--~~~~~~~D~--~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p---~~~D~v~ 240 (332)
T 3i53_A 169 ALGHVVDVGGG-SGGLLSALLTAHE--DLSGTVLDL--QGPASAAHRRFLDTGLSGRAQVVVGSFFDPLP---AGAGGYV 240 (332)
T ss_dssp GGSEEEEETCT-TSHHHHHHHHHCT--TCEEEEEEC--HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCC---CSCSEEE
T ss_pred CCCEEEEeCCC-hhHHHHHHHHHCC--CCeEEEecC--HHHHHHHHHhhhhcCcCcCeEEecCCCCCCCC---CCCcEEE
Confidence 35899999996 9999999998875 579999998 789999999886 667889999999975443 2799999
Q ss_pred EcCCCCC---ccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 118 IDCNIDI---DGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 118 iD~~k~~---~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
+-.--.. .....+++.+.+. |+|.|-+++.+.+.
T Consensus 241 ~~~vlh~~~~~~~~~~l~~~~~~--L~pgG~l~i~e~~~ 277 (332)
T 3i53_A 241 LSAVLHDWDDLSAVAILRRCAEA--AGSGGVVLVIEAVA 277 (332)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHH--HTTTCEEEEEECCC
T ss_pred EehhhccCCHHHHHHHHHHHHHh--cCCCCEEEEEeecC
Confidence 7443210 3347789999998 88744444555443
No 227
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.85 E-value=1.3e-08 Score=89.49 Aligned_cols=105 Identities=11% Similarity=0.051 Sum_probs=80.0
Q ss_pred CCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhcCCCccEEEE
Q 042616 41 AQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGDYRGADFVLI 118 (220)
Q Consensus 41 a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~~~~~D~Vfi 118 (220)
+.+||||||| +|..+..|+...+ +.+++.+|. +..++.|++++. ++.++|+++.+|..+..+....+||+|++
T Consensus 180 ~~~vlDvG~G-~G~~~~~l~~~~p--~~~~~~~D~--~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~ 254 (352)
T 3mcz_A 180 ARTVIDLAGG-HGTYLAQVLRRHP--QLTGQIWDL--PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVML 254 (352)
T ss_dssp CCEEEEETCT-TCHHHHHHHHHCT--TCEEEEEEC--GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEE
T ss_pred CCEEEEeCCC-cCHHHHHHHHhCC--CCeEEEEEC--HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEE
Confidence 7899999996 9999999998765 489999999 468999999886 66678999999998753212457999998
Q ss_pred cCCCCC---ccHHHHHHHHHhhcCCCCCCEEE-EEecCC
Q 042616 119 DCNIDI---DGHKNVFRAAKESVMHGSGAGVI-VGYNAL 153 (220)
Q Consensus 119 D~~k~~---~~y~~~l~~l~~~~~L~~~Ggvi-v~dNv~ 153 (220)
-.-.+. .+...+++.+.+. |+| ||.+ +.+.+.
T Consensus 255 ~~vlh~~~~~~~~~~l~~~~~~--L~p-gG~l~i~e~~~ 290 (352)
T 3mcz_A 255 NDCLHYFDAREAREVIGHAAGL--VKP-GGALLILTMTM 290 (352)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHT--EEE-EEEEEEEEECC
T ss_pred ecccccCCHHHHHHHHHHHHHH--cCC-CCEEEEEEecc
Confidence 543310 2346789999998 887 6655 444443
No 228
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.84 E-value=7e-09 Score=90.53 Aligned_cols=100 Identities=20% Similarity=0.197 Sum_probs=76.0
Q ss_pred CCCC-CChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEE
Q 042616 20 GKRG-KEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIE 96 (220)
Q Consensus 20 ~~~~-~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve 96 (220)
++.+ +.+...+.+...+...+..+||||||| +|..|..|+.. +++|++||.| +.+++.|++++. ++ ++++
T Consensus 21 Gq~fl~~~~i~~~i~~~~~~~~~~~VLDiG~G-~G~lt~~La~~----~~~v~~vDi~-~~~~~~a~~~~~~~~~-~~v~ 93 (299)
T 2h1r_A 21 GQHLLKNPGILDKIIYAAKIKSSDIVLEIGCG-TGNLTVKLLPL----AKKVITIDID-SRMISEVKKRCLYEGY-NNLE 93 (299)
T ss_dssp --CEECCHHHHHHHHHHHCCCTTCEEEEECCT-TSTTHHHHTTT----SSEEEEECSC-HHHHHHHHHHHHHTTC-CCEE
T ss_pred ccceecCHHHHHHHHHhcCCCCcCEEEEEcCc-CcHHHHHHHhc----CCEEEEEECC-HHHHHHHHHHHHHcCC-CceE
Confidence 4544 578888888888777788999999997 99999988863 6799999999 999999999986 55 6899
Q ss_pred EEEcchhhhhhhcCCCccEEEEcCCCCCccHHHHH
Q 042616 97 FVKGDAQKLLMGDYRGADFVLIDCNIDIDGHKNVF 131 (220)
Q Consensus 97 ~v~gda~~~L~~~~~~~D~VfiD~~k~~~~y~~~l 131 (220)
++++|+.+.. ...||+|+.|.+. ......+
T Consensus 94 ~~~~D~~~~~---~~~~D~Vv~n~py--~~~~~~~ 123 (299)
T 2h1r_A 94 VYEGDAIKTV---FPKFDVCTANIPY--KISSPLI 123 (299)
T ss_dssp C----CCSSC---CCCCSEEEEECCG--GGHHHHH
T ss_pred EEECchhhCC---cccCCEEEEcCCc--ccccHHH
Confidence 9999998743 3589999999876 4444443
No 229
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.83 E-value=2.1e-08 Score=87.27 Aligned_cols=105 Identities=14% Similarity=0.069 Sum_probs=80.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhcCCCccEE
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGDYRGADFV 116 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~~~~~D~V 116 (220)
.+..+|||+||| +|..+..|+...+ +.+++++|.+ ..++.|++++. ++.++|+++.+|..+. + ....||+|
T Consensus 164 ~~~~~vlDvG~G-~G~~~~~l~~~~p--~~~~~~~D~~--~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-~~~~~D~v 236 (335)
T 2r3s_A 164 IEPLKVLDISAS-HGLFGIAVAQHNP--NAEIFGVDWA--SVLEVAKENARIQGVASRYHTIAGSAFEV-D-YGNDYDLV 236 (335)
T ss_dssp CCCSEEEEETCT-TCHHHHHHHHHCT--TCEEEEEECH--HHHHHHHHHHHHHTCGGGEEEEESCTTTS-C-CCSCEEEE
T ss_pred CCCCEEEEECCC-cCHHHHHHHHHCC--CCeEEEEecH--HHHHHHHHHHHhcCCCcceEEEecccccC-C-CCCCCcEE
Confidence 567899999996 9999999998764 5799999997 88999999886 6667899999998763 2 23459999
Q ss_pred EEcCCCCC---ccHHHHHHHHHhhcCCCCCCE-EEEEecCC
Q 042616 117 LIDCNIDI---DGHKNVFRAAKESVMHGSGAG-VIVGYNAL 153 (220)
Q Consensus 117 fiD~~k~~---~~y~~~l~~l~~~~~L~~~Gg-viv~dNv~ 153 (220)
++-..... .+...+++.+.+. |+| || +++.+...
T Consensus 237 ~~~~~l~~~~~~~~~~~l~~~~~~--L~p-gG~l~i~e~~~ 274 (335)
T 2r3s_A 237 LLPNFLHHFDVATCEQLLRKIKTA--LAV-EGKVIVFDFIP 274 (335)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHH--EEE-EEEEEEEECCC
T ss_pred EEcchhccCCHHHHHHHHHHHHHh--CCC-CcEEEEEeecC
Confidence 98433211 3446889999998 876 77 55555443
No 230
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.82 E-value=1.2e-08 Score=89.72 Aligned_cols=89 Identities=16% Similarity=0.207 Sum_probs=71.2
Q ss_pred HHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhh---
Q 042616 29 GEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKL--- 105 (220)
Q Consensus 29 ~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~--- 105 (220)
.+.+..| ...+..+|||+||| +|..|+.|+...+ +++|++||.| +++++.|+++++...++++++++|+.++
T Consensus 16 ~e~l~~L-~~~~g~~vLD~g~G-~G~~s~~la~~~~--~~~VigvD~d-~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~ 90 (301)
T 1m6y_A 16 REVIEFL-KPEDEKIILDCTVG-EGGHSRAILEHCP--GCRIIGIDVD-SEVLRIAEEKLKEFSDRVSLFKVSYREADFL 90 (301)
T ss_dssp HHHHHHH-CCCTTCEEEETTCT-TSHHHHHHHHHCT--TCEEEEEESC-HHHHHHHHHHTGGGTTTEEEEECCGGGHHHH
T ss_pred HHHHHhc-CCCCCCEEEEEeCC-cCHHHHHHHHHCC--CCEEEEEECC-HHHHHHHHHHHHhcCCcEEEEECCHHHHHHH
Confidence 3444443 45567899999997 9999999998764 6899999999 9999999999973336899999998775
Q ss_pred hhhcC-CCccEEEEcCCC
Q 042616 106 LMGDY-RGADFVLIDCNI 122 (220)
Q Consensus 106 L~~~~-~~~D~VfiD~~k 122 (220)
++... .+||.|++|.+.
T Consensus 91 l~~~g~~~~D~Vl~D~gv 108 (301)
T 1m6y_A 91 LKTLGIEKVDGILMDLGV 108 (301)
T ss_dssp HHHTTCSCEEEEEEECSC
T ss_pred HHhcCCCCCCEEEEcCcc
Confidence 22211 579999999976
No 231
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.82 E-value=3.3e-08 Score=83.67 Aligned_cols=105 Identities=12% Similarity=-0.023 Sum_probs=77.1
Q ss_pred CCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcch
Q 042616 23 GKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDA 102 (220)
Q Consensus 23 ~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda 102 (220)
.+.+...+.+...+...+..+||||||| +|..|..|+.. +++|++||.| +.+++.++++++.. ++++++++|+
T Consensus 13 l~d~~~~~~i~~~~~~~~~~~VLDiG~G-~G~lt~~l~~~----~~~v~~vD~~-~~~~~~a~~~~~~~-~~v~~~~~D~ 85 (244)
T 1qam_A 13 ITSKHNIDKIMTNIRLNEHDNIFEIGSG-KGHFTLELVQR----CNFVTAIEID-HKLCKTTENKLVDH-DNFQVLNKDI 85 (244)
T ss_dssp CCCHHHHHHHHTTCCCCTTCEEEEECCT-TSHHHHHHHHH----SSEEEEECSC-HHHHHHHHHHTTTC-CSEEEECCCG
T ss_pred cCCHHHHHHHHHhCCCCCCCEEEEEeCC-chHHHHHHHHc----CCeEEEEECC-HHHHHHHHHhhccC-CCeEEEEChH
Confidence 4567777777666666678899999997 99999999986 4799999999 99999999998754 6899999999
Q ss_pred hhhhhhcCCCccEEEEcCCCCCccHHHHHHHHHhh
Q 042616 103 QKLLMGDYRGADFVLIDCNIDIDGHKNVFRAAKES 137 (220)
Q Consensus 103 ~~~L~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~ 137 (220)
.+.-......| .|+.+.+- ......+..+...
T Consensus 86 ~~~~~~~~~~~-~vv~nlPy--~~~~~~l~~~l~~ 117 (244)
T 1qam_A 86 LQFKFPKNQSY-KIFGNIPY--NISTDIIRKIVFD 117 (244)
T ss_dssp GGCCCCSSCCC-EEEEECCG--GGHHHHHHHHHHS
T ss_pred HhCCcccCCCe-EEEEeCCc--ccCHHHHHHHHhc
Confidence 88531111234 46666654 3334455555443
No 232
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.80 E-value=1.6e-08 Score=89.38 Aligned_cols=120 Identities=9% Similarity=0.014 Sum_probs=88.5
Q ss_pred CCCCChhHHHHHHHHHh----hCCCCEEEEEcCCchHHHHHHHHHHcCCC---CcEEEEEeCCchhHHHHHHHHhc--cc
Q 042616 21 KRGKEPDVGEFISALAA----GNNAQLIVMACSSIAVSRTLALVAAARQT---GGRVVCILSGVIGDIDASKKSLG--RY 91 (220)
Q Consensus 21 ~~~~~p~~~~~L~~La~----~~~a~~ILEIGtg~~G~sTl~LA~A~~~~---~grV~tIE~d~~~~~~~Ar~~l~--g~ 91 (220)
+...++.+..++..++. ..+..+|||+||| +|..++.++..++.. ..+++++|.+ +..++.|+.++. ++
T Consensus 107 ~~~TP~~i~~~~~~ll~~l~~~~~~~~VlDp~cG-sG~~l~~~~~~~~~~~~~~~~v~GiDi~-~~~~~~a~~n~~~~g~ 184 (344)
T 2f8l_A 107 HQMTPDSIGFIVAYLLEKVIQKKKNVSILDPACG-TANLLTTVINQLELKGDVDVHASGVDVD-DLLISLALVGADLQRQ 184 (344)
T ss_dssp GCCCCHHHHHHHHHHHHHHHTTCSEEEEEETTCT-TSHHHHHHHHHHHTTSSCEEEEEEEESC-HHHHHHHHHHHHHHTC
T ss_pred cCCChHHHHHHHHHHHHHhcCCCCCCEEEeCCCC-ccHHHHHHHHHHHHhcCCCceEEEEECC-HHHHHHHHHHHHhCCC
Confidence 34566666777666653 3356799999997 999999998887641 2789999999 999999999986 55
Q ss_pred CCcEEEEEcchhhhhhhcCCCccEEEEcCCCCC------------------ccH-HHHHHHHHhhcCCCCCCEEEEE
Q 042616 92 ANCIEFVKGDAQKLLMGDYRGADFVLIDCNIDI------------------DGH-KNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 92 ~~~Ve~v~gda~~~L~~~~~~~D~VfiD~~k~~------------------~~y-~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
+++++++|+.+..+ ..+||+|+.+.+-.. .++ ..+++.+.+. |+| ||.+++
T Consensus 185 --~~~i~~~D~l~~~~--~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~--Lk~-gG~~~~ 254 (344)
T 2f8l_A 185 --KMTLLHQDGLANLL--VDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRY--TKP-GGYLFF 254 (344)
T ss_dssp --CCEEEESCTTSCCC--CCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHT--EEE-EEEEEE
T ss_pred --CceEEECCCCCccc--cCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHH--hCC-CCEEEE
Confidence 68999999876432 368999999987200 011 3578888888 876 776443
No 233
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.78 E-value=1.8e-08 Score=89.22 Aligned_cols=102 Identities=16% Similarity=0.139 Sum_probs=79.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhcCCCccEE
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGDYRGADFV 116 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~~~~~D~V 116 (220)
.+..+||||||| +|..+..|+...+ +.+++++|. +.+++.|++++. ++.++|+++.+|..+.+| ..||+|
T Consensus 181 ~~~~~vlDvG~G-~G~~~~~l~~~~~--~~~~~~~D~--~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---~~~D~v 252 (374)
T 1qzz_A 181 SAVRHVLDVGGG-NGGMLAAIALRAP--HLRGTLVEL--AGPAERARRRFADAGLADRVTVAEGDFFKPLP---VTADVV 252 (374)
T ss_dssp TTCCEEEEETCT-TSHHHHHHHHHCT--TCEEEEEEC--HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCS---CCEEEE
T ss_pred CCCCEEEEECCC-cCHHHHHHHHHCC--CCEEEEEeC--HHHHHHHHHHHHhcCCCCceEEEeCCCCCcCC---CCCCEE
Confidence 457899999996 9999999998864 579999999 689999999986 666789999999977554 349999
Q ss_pred EEcCCCCC---ccHHHHHHHHHhhcCCCCCCEE-EEEec
Q 042616 117 LIDCNIDI---DGHKNVFRAAKESVMHGSGAGV-IVGYN 151 (220)
Q Consensus 117 fiD~~k~~---~~y~~~l~~l~~~~~L~~~Ggv-iv~dN 151 (220)
++..-... .....+++.+.+. |+| ||. ++.+.
T Consensus 253 ~~~~vl~~~~~~~~~~~l~~~~~~--L~p-gG~l~i~e~ 288 (374)
T 1qzz_A 253 LLSFVLLNWSDEDALTILRGCVRA--LEP-GGRLLVLDR 288 (374)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHH--EEE-EEEEEEEEC
T ss_pred EEeccccCCCHHHHHHHHHHHHHh--cCC-CcEEEEEec
Confidence 98654311 2224789999998 887 775 45554
No 234
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.78 E-value=3.9e-08 Score=85.83 Aligned_cols=102 Identities=17% Similarity=0.187 Sum_probs=78.7
Q ss_pred CEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhcCCCccEEEEc
Q 042616 42 QLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGDYRGADFVLID 119 (220)
Q Consensus 42 ~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~~~~~D~VfiD 119 (220)
.+|||+||| +|..+..|+...+ +.+++++|. +..++.|++++. ++.++|+++.+|..+.+ ..+||+|++.
T Consensus 169 ~~vlDvG~G-~G~~~~~l~~~~p--~~~~~~~D~--~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~D~v~~~ 240 (334)
T 2ip2_A 169 RSFVDVGGG-SGELTKAILQAEP--SARGVMLDR--EGSLGVARDNLSSLLAGERVSLVGGDMLQEV---PSNGDIYLLS 240 (334)
T ss_dssp CEEEEETCT-TCHHHHHHHHHCT--TCEEEEEEC--TTCTHHHHHHTHHHHHTTSEEEEESCTTTCC---CSSCSEEEEE
T ss_pred CEEEEeCCC-chHHHHHHHHHCC--CCEEEEeCc--HHHHHHHHHHHhhcCCCCcEEEecCCCCCCC---CCCCCEEEEc
Confidence 899999996 9999999998864 579999999 688999999886 66678999999997743 3579999986
Q ss_pred CCCC---CccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 120 CNID---IDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 120 ~~k~---~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
.-.. ......+++.+.+. |+|.|-+++.+.+.
T Consensus 241 ~vl~~~~~~~~~~~l~~~~~~--L~pgG~l~i~e~~~ 275 (334)
T 2ip2_A 241 RIIGDLDEAASLRLLGNCREA--MAGDGRVVVIERTI 275 (334)
T ss_dssp SCGGGCCHHHHHHHHHHHHHH--SCTTCEEEEEECCB
T ss_pred hhccCCCHHHHHHHHHHHHHh--cCCCCEEEEEEecc
Confidence 5441 02334789999998 88744445555443
No 235
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.77 E-value=2.6e-08 Score=87.90 Aligned_cols=103 Identities=15% Similarity=0.184 Sum_probs=79.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhcCCCccEE
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGDYRGADFV 116 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~~~~~D~V 116 (220)
.+..+||||||| +|..+..|+...+ +.+++.+|. +.+++.|++++. ++.++|+++.+|..+.+| ..||+|
T Consensus 182 ~~~~~vLDvG~G-~G~~~~~l~~~~~--~~~~~~~D~--~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---~~~D~v 253 (360)
T 1tw3_A 182 TNVRHVLDVGGG-KGGFAAAIARRAP--HVSATVLEM--AGTVDTARSYLKDEGLSDRVDVVEGDFFEPLP---RKADAI 253 (360)
T ss_dssp TTCSEEEEETCT-TSHHHHHHHHHCT--TCEEEEEEC--TTHHHHHHHHHHHTTCTTTEEEEECCTTSCCS---SCEEEE
T ss_pred ccCcEEEEeCCc-CcHHHHHHHHhCC--CCEEEEecC--HHHHHHHHHHHHhcCCCCceEEEeCCCCCCCC---CCccEE
Confidence 457899999996 9999999998764 478999998 578999999986 666789999999977554 359999
Q ss_pred EEcCCCCC---ccHHHHHHHHHhhcCCCCCCEE-EEEecC
Q 042616 117 LIDCNIDI---DGHKNVFRAAKESVMHGSGAGV-IVGYNA 152 (220)
Q Consensus 117 fiD~~k~~---~~y~~~l~~l~~~~~L~~~Ggv-iv~dNv 152 (220)
++..-... .+...+++.+.+. |+| ||. ++.+.+
T Consensus 254 ~~~~vl~~~~~~~~~~~l~~~~~~--L~p-gG~l~i~e~~ 290 (360)
T 1tw3_A 254 ILSFVLLNWPDHDAVRILTRCAEA--LEP-GGRILIHERD 290 (360)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHT--EEE-EEEEEEEECC
T ss_pred EEcccccCCCHHHHHHHHHHHHHh--cCC-CcEEEEEEEe
Confidence 98654310 2235789999998 887 665 555555
No 236
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.77 E-value=5.9e-08 Score=85.86 Aligned_cols=104 Identities=14% Similarity=0.027 Sum_probs=80.1
Q ss_pred hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhcCCCccE
Q 042616 38 GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGDYRGADF 115 (220)
Q Consensus 38 ~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~~~~~D~ 115 (220)
..+..+||||||| +|..+..|+...+ +.+++++|. +..++.|+++++ ++.++|+++.+|+.+. + ...+|+
T Consensus 188 ~~~~~~vLDvG~G-~G~~~~~l~~~~p--~~~~~~~D~--~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~--~~~~D~ 259 (359)
T 1x19_A 188 LDGVKKMIDVGGG-IGDISAAMLKHFP--ELDSTILNL--PGAIDLVNENAAEKGVADRMRGIAVDIYKE-S--YPEADA 259 (359)
T ss_dssp CTTCCEEEEESCT-TCHHHHHHHHHCT--TCEEEEEEC--GGGHHHHHHHHHHTTCTTTEEEEECCTTTS-C--CCCCSE
T ss_pred CCCCCEEEEECCc-ccHHHHHHHHHCC--CCeEEEEec--HHHHHHHHHHHHhcCCCCCEEEEeCccccC-C--CCCCCE
Confidence 3557899999996 9999999998864 579999999 688999999987 6667799999999874 2 234599
Q ss_pred EEEcCCCCC---ccHHHHHHHHHhhcCCCCCCEEE-EEecC
Q 042616 116 VLIDCNIDI---DGHKNVFRAAKESVMHGSGAGVI-VGYNA 152 (220)
Q Consensus 116 VfiD~~k~~---~~y~~~l~~l~~~~~L~~~Ggvi-v~dNv 152 (220)
|++..-... .....+++.+.+. |+| ||.+ +.+.+
T Consensus 260 v~~~~vlh~~~d~~~~~~l~~~~~~--L~p-gG~l~i~e~~ 297 (359)
T 1x19_A 260 VLFCRILYSANEQLSTIMCKKAFDA--MRS-GGRLLILDMV 297 (359)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHTT--CCT-TCEEEEEEEC
T ss_pred EEEechhccCCHHHHHHHHHHHHHh--cCC-CCEEEEEecc
Confidence 998654411 2257789999998 887 6655 66543
No 237
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.75 E-value=2.6e-08 Score=81.79 Aligned_cols=104 Identities=14% Similarity=0.056 Sum_probs=78.3
Q ss_pred HHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhh
Q 042616 29 GEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMG 108 (220)
Q Consensus 29 ~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~ 108 (220)
.+.+..+....++.+|||+||| +|..+..|+.. +++|.+ +.+++.|+++ +++++++|+.+. +.
T Consensus 36 ~~~~~~l~~~~~~~~vLDiG~G-~G~~~~~l~~~--------~~vD~s-~~~~~~a~~~------~~~~~~~d~~~~-~~ 98 (219)
T 1vlm_A 36 LSELQAVKCLLPEGRGVEIGVG-TGRFAVPLKIK--------IGVEPS-ERMAEIARKR------GVFVLKGTAENL-PL 98 (219)
T ss_dssp HHHHHHHHHHCCSSCEEEETCT-TSTTHHHHTCC--------EEEESC-HHHHHHHHHT------TCEEEECBTTBC-CS
T ss_pred HHHHHHHHHhCCCCcEEEeCCC-CCHHHHHHHHH--------hccCCC-HHHHHHHHhc------CCEEEEcccccC-CC
Confidence 3444555555668899999997 89988877641 999999 9999999886 588999998763 33
Q ss_pred cCCCccEEEEcCCCC-CccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 109 DYRGADFVLIDCNID-IDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 109 ~~~~~D~VfiD~~k~-~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
..+.||+|+...... ..+...+++.+.+. |+| ||.+++...
T Consensus 99 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~--L~p-gG~l~i~~~ 140 (219)
T 1vlm_A 99 KDESFDFALMVTTICFVDDPERALKEAYRI--LKK-GGYLIVGIV 140 (219)
T ss_dssp CTTCEEEEEEESCGGGSSCHHHHHHHHHHH--EEE-EEEEEEEEE
T ss_pred CCCCeeEEEEcchHhhccCHHHHHHHHHHH--cCC-CcEEEEEEe
Confidence 246899999876531 14567889999998 876 887776533
No 238
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.74 E-value=2.1e-08 Score=81.60 Aligned_cols=97 Identities=19% Similarity=0.128 Sum_probs=75.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhh-hhhcCCCccEEE
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKL-LMGDYRGADFVL 117 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~-L~~~~~~~D~Vf 117 (220)
.++.+|||+||| +|..+..|+.. +.+++++|++ +.+++.|++++ .+++++|+.+. ++...++||+|+
T Consensus 31 ~~~~~vLdiG~G-~G~~~~~l~~~----~~~~~~~D~~-~~~~~~~~~~~------~~~~~~d~~~~~~~~~~~~fD~v~ 98 (230)
T 3cc8_A 31 KEWKEVLDIGCS-SGALGAAIKEN----GTRVSGIEAF-PEAAEQAKEKL------DHVVLGDIETMDMPYEEEQFDCVI 98 (230)
T ss_dssp TTCSEEEEETCT-TSHHHHHHHTT----TCEEEEEESS-HHHHHHHHTTS------SEEEESCTTTCCCCSCTTCEEEEE
T ss_pred cCCCcEEEeCCC-CCHHHHHHHhc----CCeEEEEeCC-HHHHHHHHHhC------CcEEEcchhhcCCCCCCCccCEEE
Confidence 577899999997 99999988864 4799999999 99999988765 36888998764 322236899999
Q ss_pred EcCCC-CCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 118 IDCNI-DIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 118 iD~~k-~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
..... ...+....++.+.+. |+| ||.+++.
T Consensus 99 ~~~~l~~~~~~~~~l~~~~~~--L~~-gG~l~~~ 129 (230)
T 3cc8_A 99 FGDVLEHLFDPWAVIEKVKPY--IKQ-NGVILAS 129 (230)
T ss_dssp EESCGGGSSCHHHHHHHTGGG--EEE-EEEEEEE
T ss_pred ECChhhhcCCHHHHHHHHHHH--cCC-CCEEEEE
Confidence 86543 113557889999998 876 8877764
No 239
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.74 E-value=2.4e-08 Score=85.45 Aligned_cols=105 Identities=8% Similarity=-0.051 Sum_probs=73.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcc----------------cC-----------
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGR----------------YA----------- 92 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g----------------~~----------- 92 (220)
++.+||||||| +|..++.++. .. +.+|++||++ +.+++.|++.++. +.
T Consensus 71 ~~~~vLDiGcG-~G~~~~l~~~--~~-~~~v~gvD~s-~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 145 (289)
T 2g72_A 71 SGRTLIDIGSG-PTVYQLLSAC--SH-FEDITMTDFL-EVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKER 145 (289)
T ss_dssp CCSEEEEETCT-TCCGGGTTGG--GG-CSEEEEECSC-HHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHH
T ss_pred CCCeEEEECCC-cChHHHHhhc--cC-CCeEEEeCCC-HHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHH
Confidence 67899999997 8984433332 22 5799999999 9999999886531 00
Q ss_pred ----CcEEEEEcchhhhhhh----c-CCCccEEEEcCCCC-----CccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 93 ----NCIEFVKGDAQKLLMG----D-YRGADFVLIDCNID-----IDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 93 ----~~Ve~v~gda~~~L~~----~-~~~~D~VfiD~~k~-----~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
..++++.+|+.+.+|. . .++||+|+.-.... ..++...++.+.+. |+| ||.+++...
T Consensus 146 ~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~--Lkp-GG~l~~~~~ 216 (289)
T 2g72_A 146 QLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTL--LRP-GGHLLLIGA 216 (289)
T ss_dssp HHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTT--EEE-EEEEEEEEE
T ss_pred HHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHh--cCC-CCEEEEEEe
Confidence 0267888898875441 1 24599999765430 02567889999998 887 888777543
No 240
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.73 E-value=3.5e-08 Score=84.84 Aligned_cols=106 Identities=9% Similarity=0.099 Sum_probs=74.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCC--CCcEE--EEEeCCchhHHHHHHHHhc---ccCCcE--EEEEcchhhhhh--
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQ--TGGRV--VCILSGVIGDIDASKKSLG---RYANCI--EFVKGDAQKLLM-- 107 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~--~~grV--~tIE~d~~~~~~~Ar~~l~---g~~~~V--e~v~gda~~~L~-- 107 (220)
.++.+||||||| +|..|..++..+.. .+.+| ++||++ +++++.|++.++ ++ .++ ++..++++++.+
T Consensus 51 ~~~~~VLDiG~G-tG~~~~~~l~~l~~~~~~~~v~~~~vD~S-~~ml~~a~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~ 127 (292)
T 2aot_A 51 KSEIKILSIGGG-AGEIDLQILSKVQAQYPGVCINNEVVEPS-AEQIAKYKELVAKTSNL-ENVKFAWHKETSSEYQSRM 127 (292)
T ss_dssp CSEEEEEEETCT-TSHHHHHHHHHHHHHSTTCEEEEEEECSC-HHHHHHHHHHHHTCSSC-TTEEEEEECSCHHHHHHHH
T ss_pred CCCCeEEEEcCC-CCHHHHHHHHHHHhhCCCceeeEEEEeCC-HHHHHHHHHHHHhccCC-CcceEEEEecchhhhhhhh
Confidence 345789999997 99887654433211 14555 999999 999999999875 33 344 556778876542
Q ss_pred ---hcCCCccEEEEcCCC-CCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 108 ---GDYRGADFVLIDCNI-DIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 108 ---~~~~~~D~VfiD~~k-~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
...++||+|+.-.-- .-.+....++.+.+. |+| ||.+++-
T Consensus 128 ~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~--Lkp-gG~l~i~ 171 (292)
T 2aot_A 128 LEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSL--LGT-NAKMLII 171 (292)
T ss_dssp HTTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHT--EEE-EEEEEEE
T ss_pred ccccCCCceeEEEEeeeeeecCCHHHHHHHHHHH--cCC-CcEEEEE
Confidence 124689999976433 114678889999998 887 7776653
No 241
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.72 E-value=5e-08 Score=78.53 Aligned_cols=97 Identities=13% Similarity=0.116 Sum_probs=68.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhh------------
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLL------------ 106 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L------------ 106 (220)
.+..+|||+||| +|..|+.|+...++.+++|+++|.+ +.. .. .+++++++|+.+..
T Consensus 21 ~~~~~vLDlGcG-~G~~~~~l~~~~~~~~~~v~gvD~s-~~~---------~~-~~v~~~~~d~~~~~~~~~~~~~~i~~ 88 (201)
T 2plw_A 21 KKNKIILDIGCY-PGSWCQVILERTKNYKNKIIGIDKK-IMD---------PI-PNVYFIQGEIGKDNMNNIKNINYIDN 88 (201)
T ss_dssp CTTEEEEEESCT-TCHHHHHHHHHTTTSCEEEEEEESS-CCC---------CC-TTCEEEECCTTTTSSCCC--------
T ss_pred CCCCEEEEeCCC-CCHHHHHHHHHcCCCCceEEEEeCC-ccC---------CC-CCceEEEccccchhhhhhcccccccc
Confidence 456799999997 9999999998765225899999999 631 12 46899999987642
Q ss_pred -----------hhc-CCCccEEEEcCCCCCc-----cH-------HHHHHHHHhhcCCCCCCEEEEEe
Q 042616 107 -----------MGD-YRGADFVLIDCNIDID-----GH-------KNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 107 -----------~~~-~~~~D~VfiD~~k~~~-----~y-------~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
..+ ..+||+|+.|...... +. ...++.+.+. |+| ||.+++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~--Lkp-gG~lv~~ 153 (201)
T 2plw_A 89 MNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQY--INI-GGTYIVK 153 (201)
T ss_dssp ---CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHH--EEE-EEEEEEE
T ss_pred ccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHH--ccC-CCEEEEE
Confidence 001 3589999998754110 11 1256778887 876 8888774
No 242
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.70 E-value=3.4e-08 Score=88.65 Aligned_cols=89 Identities=17% Similarity=0.100 Sum_probs=70.6
Q ss_pred CCCCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEE
Q 042616 20 GKRGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVK 99 (220)
Q Consensus 20 ~~~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~ 99 (220)
++...++..++++..++...+..+|||+||| +|..++.+++.... ..+++++|.+ +.+++.| .++++++
T Consensus 19 g~~~TP~~l~~~~~~~~~~~~~~~vLD~gcG-tG~~~~~~~~~~~~-~~~i~gvDi~-~~~~~~a--------~~~~~~~ 87 (421)
T 2ih2_A 19 GRVETPPEVVDFMVSLAEAPRGGRVLEPACA-HGPFLRAFREAHGT-AYRFVGVEID-PKALDLP--------PWAEGIL 87 (421)
T ss_dssp --CCCCHHHHHHHHHHCCCCTTCEEEEETCT-TCHHHHHHHHHHCS-CSEEEEEESC-TTTCCCC--------TTEEEEE
T ss_pred ceEeCCHHHHHHHHHhhccCCCCEEEECCCC-ChHHHHHHHHHhCC-CCeEEEEECC-HHHHHhC--------CCCcEEe
Confidence 5667778888888888765567799999997 99999999876533 5799999999 8887665 4799999
Q ss_pred cchhhhhhhcCCCccEEEEcCC
Q 042616 100 GDAQKLLMGDYRGADFVLIDCN 121 (220)
Q Consensus 100 gda~~~L~~~~~~~D~VfiD~~ 121 (220)
+|+.+..+ .+.||+|+.+.+
T Consensus 88 ~D~~~~~~--~~~fD~Ii~NPP 107 (421)
T 2ih2_A 88 ADFLLWEP--GEAFDLILGNPP 107 (421)
T ss_dssp SCGGGCCC--SSCEEEEEECCC
T ss_pred CChhhcCc--cCCCCEEEECcC
Confidence 99988643 368999999643
No 243
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.68 E-value=2.5e-08 Score=84.74 Aligned_cols=108 Identities=13% Similarity=0.019 Sum_probs=74.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcc----c-----------------------
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGR----Y----------------------- 91 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g----~----------------------- 91 (220)
.+.++||||||| +|..++.++. ....+|+++|.+ +.+++.|+++++. +
T Consensus 54 ~~g~~vLDiGCG-~G~~~~~~~~---~~~~~v~g~D~s-~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~ 128 (263)
T 2a14_A 54 LQGDTLIDIGSG-PTIYQVLAAC---DSFQDITLSDFT-DRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKE 128 (263)
T ss_dssp CCEEEEEESSCT-TCCGGGTTGG---GTEEEEEEEESC-HHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHH
T ss_pred CCCceEEEeCCC-ccHHHHHHHH---hhhcceeecccc-HHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHH
Confidence 456789999997 7866554442 212479999999 9999999987641 0
Q ss_pred ---CCcEE-EEEcchhhhhhh---cCCCccEEEEcCCC-----CCccHHHHHHHHHhhcCCCCCCEEEEEecCCC
Q 042616 92 ---ANCIE-FVKGDAQKLLMG---DYRGADFVLIDCNI-----DIDGHKNVFRAAKESVMHGSGAGVIVGYNALP 154 (220)
Q Consensus 92 ---~~~Ve-~v~gda~~~L~~---~~~~~D~VfiD~~k-----~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~~ 154 (220)
..+|+ ++++|..+..|. ..++||+|+.-.-- +..++...++.+.+. |+| ||.+++.....
T Consensus 129 ~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~--LKP-GG~li~~~~~~ 200 (263)
T 2a14_A 129 EKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASL--LKP-GGHLVTTVTLR 200 (263)
T ss_dssp HHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTT--EEE-EEEEEEEEESS
T ss_pred HHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHH--cCC-CcEEEEEEeec
Confidence 11354 899998874331 14689999974211 114567788888898 887 88888775543
No 244
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.67 E-value=6.4e-08 Score=79.00 Aligned_cols=93 Identities=15% Similarity=0.073 Sum_probs=67.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhh-----hh-cC--
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLL-----MG-DY-- 110 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L-----~~-~~-- 110 (220)
.+..+|||+||| +|..|..|++. +++|++||.+ +.. .. .+++++++|+.+.- .. +.
T Consensus 24 ~~g~~VLDlG~G-~G~~s~~la~~----~~~V~gvD~~-~~~---------~~-~~v~~~~~D~~~~~~~~~~~~~~~~~ 87 (191)
T 3dou_A 24 RKGDAVIEIGSS-PGGWTQVLNSL----ARKIISIDLQ-EME---------EI-AGVRFIRCDIFKETIFDDIDRALREE 87 (191)
T ss_dssp CTTCEEEEESCT-TCHHHHHHTTT----CSEEEEEESS-CCC---------CC-TTCEEEECCTTSSSHHHHHHHHHHHH
T ss_pred CCCCEEEEEeec-CCHHHHHHHHc----CCcEEEEecc-ccc---------cC-CCeEEEEccccCHHHHHHHHHHhhcc
Confidence 567899999996 99999988764 7899999999 641 12 57999999986521 01 11
Q ss_pred --CCccEEEEcCCCCC-c-----------cHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 111 --RGADFVLIDCNIDI-D-----------GHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 111 --~~~D~VfiD~~k~~-~-----------~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
++||+|+.|+.... + .....++.+.+. |+| ||.+++.
T Consensus 88 ~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~--Lkp-GG~lv~k 138 (191)
T 3dou_A 88 GIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRY--LRN-GGNVLLK 138 (191)
T ss_dssp TCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHH--EEE-EEEEEEE
T ss_pred cCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHH--ccC-CCEEEEE
Confidence 48999999975411 1 113456777787 876 8888875
No 245
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.66 E-value=1.5e-07 Score=82.28 Aligned_cols=104 Identities=8% Similarity=0.016 Sum_probs=71.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCC-----cEEEEEcch------hhhh
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYAN-----CIEFVKGDA------QKLL 106 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~-----~Ve~v~gda------~~~L 106 (220)
+..+||||||| +|..+..++.. .+++|++||++ +++++.|++... +... ++++.++|. .+ |
T Consensus 48 ~~~~VLDlGCG-~G~~l~~~~~~---~~~~v~GiD~S-~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~-l 121 (302)
T 2vdw_A 48 NKRKVLAIDFG-NGADLEKYFYG---EIALLVATDPD-ADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSS-V 121 (302)
T ss_dssp SCCEEEETTCT-TTTTHHHHHHT---TCSEEEEEESC-HHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHH-H
T ss_pred CCCeEEEEecC-CcHhHHHHHhc---CCCeEEEEECC-HHHHHHHHHHHHhccccccccccccchhhhhcccchhhhh-h
Confidence 35799999997 88644444432 15799999999 999999999876 3211 377888877 33 2
Q ss_pred hh--cCCCccEEEEcCCC----CCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 107 MG--DYRGADFVLIDCNI----DIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 107 ~~--~~~~~D~VfiD~~k----~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
+. ..++||+|+.-..- +.......++.+.+. |+| ||++++...
T Consensus 122 ~~~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~--Lkp-GG~~i~~~~ 170 (302)
T 2vdw_A 122 REVFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSEL--TAS-GGKVLITTM 170 (302)
T ss_dssp HTTCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHH--EEE-EEEEEEEEE
T ss_pred hccccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHH--cCC-CCEEEEEeC
Confidence 21 13689999853211 012347889999999 987 998887643
No 246
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.65 E-value=6e-08 Score=84.94 Aligned_cols=113 Identities=12% Similarity=-0.035 Sum_probs=75.8
Q ss_pred CCChhHHHHHHHHHhh---CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEE
Q 042616 23 GKEPDVGEFISALAAG---NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVK 99 (220)
Q Consensus 23 ~~~p~~~~~L~~La~~---~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~ 99 (220)
.++..--.+..+|... .+.+.||||||| +|++|.+|++. ..++|++||.+ +.+++.+.++- .++....
T Consensus 65 yvsrg~~Kl~~~l~~~~~~~~g~~vLDiGcG-TG~~t~~L~~~---ga~~V~aVDvs-~~mL~~a~r~~----~rv~~~~ 135 (291)
T 3hp7_A 65 YVSRGGLKLEKALAVFNLSVEDMITIDIGAS-TGGFTDVMLQN---GAKLVYAVDVG-TNQLVWKLRQD----DRVRSME 135 (291)
T ss_dssp SSSTTHHHHHHHHHHTTCCCTTCEEEEETCT-TSHHHHHHHHT---TCSEEEEECSS-SSCSCHHHHTC----TTEEEEC
T ss_pred cccchHHHHHHHHHhcCCCccccEEEecCCC-ccHHHHHHHhC---CCCEEEEEECC-HHHHHHHHHhC----cccceec
Confidence 4555555555555433 245799999997 99999998874 24799999999 99888754431 2232222
Q ss_pred -cchhhhhh-hcC-CCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEE
Q 042616 100 -GDAQKLLM-GDY-RGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 100 -gda~~~L~-~~~-~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
.++..+-+ .+. .+||+|++|..- ......+..+.+. |+| ||.+++
T Consensus 136 ~~ni~~l~~~~l~~~~fD~v~~d~sf--~sl~~vL~e~~rv--Lkp-GG~lv~ 183 (291)
T 3hp7_A 136 QYNFRYAEPVDFTEGLPSFASIDVSF--ISLNLILPALAKI--LVD-GGQVVA 183 (291)
T ss_dssp SCCGGGCCGGGCTTCCCSEEEECCSS--SCGGGTHHHHHHH--SCT-TCEEEE
T ss_pred ccCceecchhhCCCCCCCEEEEEeeH--hhHHHHHHHHHHH--cCc-CCEEEE
Confidence 23322111 112 349999999987 6778899999999 987 666655
No 247
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.64 E-value=9.8e-08 Score=86.33 Aligned_cols=95 Identities=12% Similarity=0.083 Sum_probs=74.8
Q ss_pred CChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCC------------------------------------CC
Q 042616 24 KEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQ------------------------------------TG 67 (220)
Q Consensus 24 ~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~------------------------------------~~ 67 (220)
+.+..++.|..++.-.+...|||.+|| +|..++.+|..+.. ..
T Consensus 179 l~e~lAa~ll~~~~~~~~~~vlDp~CG-SGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 257 (385)
T 3ldu_A 179 IRETLAAGLIYLTPWKAGRVLVDPMCG-SGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESK 257 (385)
T ss_dssp CCHHHHHHHHHTSCCCTTSCEEETTCT-TCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCC
T ss_pred CcHHHHHHHHHhhCCCCCCeEEEcCCC-CCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCC
Confidence 344556655555555567889999997 89998887765432 12
Q ss_pred cEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhcCCCccEEEEcCCC
Q 042616 68 GRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGDYRGADFVLIDCNI 122 (220)
Q Consensus 68 grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~~~~~D~VfiD~~k 122 (220)
.+|+++|.| +.+++.|++|+. ++.++|++.++|+.++.+ ..+||+|+.|.+-
T Consensus 258 ~~V~GvDid-~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~--~~~~D~Iv~NPPy 311 (385)
T 3ldu_A 258 FKIYGYDID-EESIDIARENAEIAGVDEYIEFNVGDATQFKS--EDEFGFIITNPPY 311 (385)
T ss_dssp CCEEEEESC-HHHHHHHHHHHHHHTCGGGEEEEECCGGGCCC--SCBSCEEEECCCC
T ss_pred ceEEEEECC-HHHHHHHHHHHHHcCCCCceEEEECChhhcCc--CCCCcEEEECCCC
Confidence 689999999 999999999997 776789999999998654 3589999999985
No 248
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.63 E-value=4.4e-08 Score=79.80 Aligned_cols=100 Identities=8% Similarity=0.007 Sum_probs=74.1
Q ss_pred hHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhh
Q 042616 27 DVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLL 106 (220)
Q Consensus 27 ~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L 106 (220)
....++..+....+..+||||||| +|..+..|+ .+++++|.+ +. +++++++|+.+ +
T Consensus 54 ~~~~~~~~l~~~~~~~~vLDiG~G-~G~~~~~l~-------~~v~~~D~s-~~--------------~~~~~~~d~~~-~ 109 (215)
T 2zfu_A 54 PVDRIARDLRQRPASLVVADFGCG-DCRLASSIR-------NPVHCFDLA-SL--------------DPRVTVCDMAQ-V 109 (215)
T ss_dssp HHHHHHHHHHTSCTTSCEEEETCT-TCHHHHHCC-------SCEEEEESS-CS--------------STTEEESCTTS-C
T ss_pred HHHHHHHHHhccCCCCeEEEECCc-CCHHHHHhh-------ccEEEEeCC-CC--------------CceEEEecccc-C
Confidence 344567666656677899999997 899887662 589999999 65 46788888877 3
Q ss_pred hhcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 107 MGDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 107 ~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
+...++||+|+........+....++.+.+. |+| ||.+++-+..
T Consensus 110 ~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~--L~~-gG~l~i~~~~ 153 (215)
T 2zfu_A 110 PLEDESVDVAVFCLSLMGTNIRDFLEEANRV--LKP-GGLLKVAEVS 153 (215)
T ss_dssp SCCTTCEEEEEEESCCCSSCHHHHHHHHHHH--EEE-EEEEEEEECG
T ss_pred CCCCCCEeEEEEehhccccCHHHHHHHHHHh--CCC-CeEEEEEEcC
Confidence 3224689999987654335678899999998 886 7777665443
No 249
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.62 E-value=1.6e-07 Score=81.57 Aligned_cols=81 Identities=16% Similarity=0.125 Sum_probs=67.4
Q ss_pred CCC-CCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEE
Q 042616 20 GKR-GKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFV 98 (220)
Q Consensus 20 ~~~-~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v 98 (220)
++. .+.+...+.+...+...+..+||||||| +|..|..|+....+.+++|++||.| +.+++.++++. .++++++
T Consensus 21 GQ~fL~d~~i~~~iv~~~~~~~~~~VLEIG~G-~G~lt~~La~~~~~~~~~V~avDid-~~~l~~a~~~~---~~~v~~i 95 (279)
T 3uzu_A 21 GQNFLVDHGVIDAIVAAIRPERGERMVEIGPG-LGALTGPVIARLATPGSPLHAVELD-RDLIGRLEQRF---GELLELH 95 (279)
T ss_dssp SCCEECCHHHHHHHHHHHCCCTTCEEEEECCT-TSTTHHHHHHHHCBTTBCEEEEECC-HHHHHHHHHHH---GGGEEEE
T ss_pred CccccCCHHHHHHHHHhcCCCCcCEEEEEccc-cHHHHHHHHHhCCCcCCeEEEEECC-HHHHHHHHHhc---CCCcEEE
Confidence 454 4678888888888888888999999997 9999999998754223569999999 99999999984 3689999
Q ss_pred Ecchhhh
Q 042616 99 KGDAQKL 105 (220)
Q Consensus 99 ~gda~~~ 105 (220)
++|+.++
T Consensus 96 ~~D~~~~ 102 (279)
T 3uzu_A 96 AGDALTF 102 (279)
T ss_dssp ESCGGGC
T ss_pred ECChhcC
Confidence 9999885
No 250
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.62 E-value=1.8e-07 Score=84.94 Aligned_cols=96 Identities=6% Similarity=-0.034 Sum_probs=75.8
Q ss_pred CCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCC------------------------------------C
Q 042616 23 GKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQ------------------------------------T 66 (220)
Q Consensus 23 ~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~------------------------------------~ 66 (220)
.+.+..+..|-.++.-.+...+||.+|| +|..++.+|..+.. .
T Consensus 184 pl~e~lAa~ll~l~~~~~~~~vlDp~CG-SGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~ 262 (393)
T 3k0b_A 184 PIKETMAAALVLLTSWHPDRPFYDPVCG-SGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQ 262 (393)
T ss_dssp SCCHHHHHHHHHHSCCCTTSCEEETTCT-TSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTC
T ss_pred CCcHHHHHHHHHHhCCCCCCeEEEcCCC-CCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccC
Confidence 3455666666666655667889999997 89998877764432 1
Q ss_pred CcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhcCCCccEEEEcCCC
Q 042616 67 GGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGDYRGADFVLIDCNI 122 (220)
Q Consensus 67 ~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~~~~~D~VfiD~~k 122 (220)
..+|+++|.| +.+++.|++|++ ++.++|+++++|+.+..+ ..+||+|+.|.+-
T Consensus 263 ~~~V~GvDid-~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~--~~~fD~Iv~NPPY 317 (393)
T 3k0b_A 263 PLNIIGGDID-ARLIEIAKQNAVEAGLGDLITFRQLQVADFQT--EDEYGVVVANPPY 317 (393)
T ss_dssp CCCEEEEESC-HHHHHHHHHHHHHTTCTTCSEEEECCGGGCCC--CCCSCEEEECCCC
T ss_pred CceEEEEECC-HHHHHHHHHHHHHcCCCCceEEEECChHhCCC--CCCCCEEEECCCC
Confidence 2579999999 999999999997 777789999999998653 3589999999884
No 251
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.60 E-value=1.1e-07 Score=83.98 Aligned_cols=102 Identities=12% Similarity=0.083 Sum_probs=73.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhcCCCccEE
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGDYRGADFV 116 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~~~~~D~V 116 (220)
.+..+||||||| +|..+..|++..+ +.+++.+|.. ..++ +++++ ++.++|+++.+|+.+.+| +||+|
T Consensus 183 ~~~~~vLDvG~G-~G~~~~~l~~~~p--~~~~~~~D~~--~~~~--~~~~~~~~~~~~v~~~~~d~~~~~p----~~D~v 251 (348)
T 3lst_A 183 PATGTVADVGGG-RGGFLLTVLREHP--GLQGVLLDRA--EVVA--RHRLDAPDVAGRWKVVEGDFLREVP----HADVH 251 (348)
T ss_dssp CSSEEEEEETCT-TSHHHHHHHHHCT--TEEEEEEECH--HHHT--TCCCCCGGGTTSEEEEECCTTTCCC----CCSEE
T ss_pred cCCceEEEECCc-cCHHHHHHHHHCC--CCEEEEecCH--HHhh--cccccccCCCCCeEEEecCCCCCCC----CCcEE
Confidence 456899999996 9999999998875 5788999985 3343 44443 666789999999975443 89999
Q ss_pred EEcCCCCC---ccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 117 LIDCNIDI---DGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 117 fiD~~k~~---~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
++-.--.. .+....++.+.+. |+|.|-+++.|.+.
T Consensus 252 ~~~~vlh~~~d~~~~~~L~~~~~~--LkpgG~l~i~e~~~ 289 (348)
T 3lst_A 252 VLKRILHNWGDEDSVRILTNCRRV--MPAHGRVLVIDAVV 289 (348)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHT--CCTTCEEEEEECCB
T ss_pred EEehhccCCCHHHHHHHHHHHHHh--cCCCCEEEEEEecc
Confidence 98553311 2235889999998 88744445555444
No 252
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.60 E-value=3.8e-08 Score=88.70 Aligned_cols=100 Identities=15% Similarity=0.098 Sum_probs=72.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEE-EEEcchhhhhhhcCCCccEEE
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIE-FVKGDAQKLLMGDYRGADFVL 117 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve-~v~gda~~~L~~~~~~~D~Vf 117 (220)
.+..+||||||| +|..+..|+.. +.+|++||++ +.+++.|++. ++..... +..+++.+ ++...++||+|+
T Consensus 106 ~~~~~VLDiGcG-~G~~~~~l~~~----g~~v~gvD~s-~~~~~~a~~~--~~~~~~~~~~~~~~~~-l~~~~~~fD~I~ 176 (416)
T 4e2x_A 106 GPDPFIVEIGCN-DGIMLRTIQEA----GVRHLGFEPS-SGVAAKAREK--GIRVRTDFFEKATADD-VRRTEGPANVIY 176 (416)
T ss_dssp SSSCEEEEETCT-TTTTHHHHHHT----TCEEEEECCC-HHHHHHHHTT--TCCEECSCCSHHHHHH-HHHHHCCEEEEE
T ss_pred CCCCEEEEecCC-CCHHHHHHHHc----CCcEEEECCC-HHHHHHHHHc--CCCcceeeechhhHhh-cccCCCCEEEEE
Confidence 356799999997 99999988874 6799999999 9999999886 3211122 22334433 433247899999
Q ss_pred EcCCC-CCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 118 IDCNI-DIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 118 iD~~k-~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
...-- .-.+....++.+.+. |+| ||++++.
T Consensus 177 ~~~vl~h~~d~~~~l~~~~r~--Lkp-gG~l~i~ 207 (416)
T 4e2x_A 177 AANTLCHIPYVQSVLEGVDAL--LAP-DGVFVFE 207 (416)
T ss_dssp EESCGGGCTTHHHHHHHHHHH--EEE-EEEEEEE
T ss_pred ECChHHhcCCHHHHHHHHHHH--cCC-CeEEEEE
Confidence 87653 114678899999999 886 8888875
No 253
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.60 E-value=2.3e-07 Score=80.74 Aligned_cols=117 Identities=13% Similarity=0.043 Sum_probs=79.0
Q ss_pred HHHHHhhCCCCEEEEEcCCch--HHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhccc-CCcEEEEEcchhhhh--
Q 042616 32 ISALAAGNNAQLIVMACSSIA--VSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRY-ANCIEFVKGDAQKLL-- 106 (220)
Q Consensus 32 L~~La~~~~a~~ILEIGtg~~--G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~-~~~Ve~v~gda~~~L-- 106 (220)
+..|+...+.+.||||||| + +-.+..++....+ +.+|+.||.+ |.+++.||+.+.+. ..+++++++|..+.-
T Consensus 70 v~~l~~~~g~~q~LDLGcG-~pT~~~~~~la~~~~P-~arVv~VD~s-p~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~ 146 (277)
T 3giw_A 70 VAHLAKEAGIRQFLDIGTG-IPTSPNLHEIAQSVAP-ESRVVYVDND-PIVLTLSQGLLASTPEGRTAYVEADMLDPASI 146 (277)
T ss_dssp HHHHHHTSCCCEEEEESCC-SCCSSCHHHHHHHHCT-TCEEEEEECC-HHHHHTTHHHHCCCSSSEEEEEECCTTCHHHH
T ss_pred HHHhccccCCCEEEEeCCC-CCcccHHHHHHHHHCC-CCEEEEEeCC-hHHHHHHHHHhccCCCCcEEEEEecccChhhh
Confidence 3344444567899999996 5 3345666665544 7899999999 99999999999732 357999999997742
Q ss_pred -h--hcCCCcc-----EEEEcCCC----CCccHHHHHHHHHhhcCCCCCCEEEEEecCCC
Q 042616 107 -M--GDYRGAD-----FVLIDCNI----DIDGHKNVFRAAKESVMHGSGAGVIVGYNALP 154 (220)
Q Consensus 107 -~--~~~~~~D-----~VfiD~~k----~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~~ 154 (220)
. ...+.|| .|++.+-. +..+...+++.+... |+| ||+++......
T Consensus 147 l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~--L~P-GG~Lvls~~~~ 203 (277)
T 3giw_A 147 LDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEP--LPS-GSYLAMSIGTA 203 (277)
T ss_dssp HTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTT--SCT-TCEEEEEEECC
T ss_pred hcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHh--CCC-CcEEEEEeccC
Confidence 1 1113455 35554433 001235789999988 876 88877765543
No 254
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.59 E-value=1.1e-07 Score=80.13 Aligned_cols=114 Identities=13% Similarity=0.017 Sum_probs=73.9
Q ss_pred CCCChhHHHHHHHHHhh---CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEE
Q 042616 22 RGKEPDVGEFISALAAG---NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFV 98 (220)
Q Consensus 22 ~~~~p~~~~~L~~La~~---~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v 98 (220)
..+++..-.+..+|... .+.++||||||| +|..|..|++. . ..+|++||.+ +.+++.|+++.. ++...
T Consensus 16 ~yvsrg~~kL~~~L~~~~~~~~g~~VLDiGcG-tG~~t~~la~~-g--~~~V~gvDis-~~ml~~a~~~~~----~~~~~ 86 (232)
T 3opn_A 16 RYVSRGGLKLEKALKEFHLEINGKTCLDIGSS-TGGFTDVMLQN-G--AKLVYALDVG-TNQLAWKIRSDE----RVVVM 86 (232)
T ss_dssp CSSSTTHHHHHHHHHHTTCCCTTCEEEEETCT-TSHHHHHHHHT-T--CSEEEEECSS-CCCCCHHHHTCT----TEEEE
T ss_pred CccCCcHHHHHHHHHHcCCCCCCCEEEEEccC-CCHHHHHHHhc-C--CCEEEEEcCC-HHHHHHHHHhCc----ccccc
Confidence 35555444444444332 345799999997 99999999874 1 2599999999 999998887643 22211
Q ss_pred Ec-chhhhh-hhcCC-CccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEE
Q 042616 99 KG-DAQKLL-MGDYR-GADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 99 ~g-da~~~L-~~~~~-~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
.. +..... ..+.. .||.+..|.-- .....+++.+.+. |+| ||.+++
T Consensus 87 ~~~~~~~~~~~~~~~~~~d~~~~D~v~--~~l~~~l~~i~rv--Lkp-gG~lv~ 135 (232)
T 3opn_A 87 EQFNFRNAVLADFEQGRPSFTSIDVSF--ISLDLILPPLYEI--LEK-NGEVAA 135 (232)
T ss_dssp CSCCGGGCCGGGCCSCCCSEEEECCSS--SCGGGTHHHHHHH--SCT-TCEEEE
T ss_pred ccceEEEeCHhHcCcCCCCEEEEEEEh--hhHHHHHHHHHHh--ccC-CCEEEE
Confidence 11 111111 01112 36888888776 6668889999999 987 776665
No 255
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.59 E-value=1.4e-07 Score=75.55 Aligned_cols=97 Identities=12% Similarity=0.012 Sum_probs=68.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCC-------CcEEEEEeCCchhHHHHHHHHhcccCCcEEEE-Ecchhhhhh---
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQT-------GGRVVCILSGVIGDIDASKKSLGRYANCIEFV-KGDAQKLLM--- 107 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~-------~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v-~gda~~~L~--- 107 (220)
.+..+|||+||| +|..++.|+...+.. .++|+++|.+ +.. .. .+++++ .+|..+...
T Consensus 21 ~~~~~vLDlGcG-~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s-~~~---------~~-~~~~~~~~~d~~~~~~~~~ 88 (196)
T 2nyu_A 21 RPGLRVLDCGAA-PGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLL-HIF---------PL-EGATFLCPADVTDPRTSQR 88 (196)
T ss_dssp CTTCEEEEETCC-SCHHHHHHHHHTTTTCCCTTSCCCEEEEECSS-CCC---------CC-TTCEEECSCCTTSHHHHHH
T ss_pred CCCCEEEEeCCC-CCHHHHHHHHHhccccccccCCCceEEEEech-hcc---------cC-CCCeEEEeccCCCHHHHHH
Confidence 457899999997 899999999886531 1899999999 631 12 468888 888654311
Q ss_pred ---hc-CCCccEEEEcCCCCC-cc----H-------HHHHHHHHhhcCCCCCCEEEEEe
Q 042616 108 ---GD-YRGADFVLIDCNIDI-DG----H-------KNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 108 ---~~-~~~~D~VfiD~~k~~-~~----y-------~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
.+ .++||+|+.|...+. .. . ...++.+.+. |+| ||.+++.
T Consensus 89 ~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--Lkp-gG~lv~~ 144 (196)
T 2nyu_A 89 ILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDI--LQP-GGTFLCK 144 (196)
T ss_dssp HHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHH--EEE-EEEEEEE
T ss_pred HHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHH--hcC-CCEEEEE
Confidence 11 247999999874310 11 1 3678888888 876 8887775
No 256
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.58 E-value=3.1e-07 Score=83.15 Aligned_cols=95 Identities=5% Similarity=-0.045 Sum_probs=74.8
Q ss_pred CChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCC------------------------------------CC
Q 042616 24 KEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQ------------------------------------TG 67 (220)
Q Consensus 24 ~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~------------------------------------~~ 67 (220)
+.+..+..|-.++.-.+...+||.+|| +|...+.+|..+.. ..
T Consensus 178 l~e~LAaall~l~~~~~~~~llDp~CG-SGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 256 (384)
T 3ldg_A 178 IKENMAAAIILLSNWFPDKPFVDPTCG-SGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQ 256 (384)
T ss_dssp CCHHHHHHHHHHTTCCTTSCEEETTCT-TSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCC
T ss_pred CcHHHHHHHHHHhCCCCCCeEEEeCCc-CCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCC
Confidence 445566666666555667889999997 89988877654432 12
Q ss_pred cEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhcCCCccEEEEcCCC
Q 042616 68 GRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGDYRGADFVLIDCNI 122 (220)
Q Consensus 68 grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~~~~~D~VfiD~~k 122 (220)
.+|+++|.| +.+++.|++|++ |+.++|+++++|+.++.+ ..+||+|+.|.+-
T Consensus 257 ~~v~GvDid-~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~--~~~fD~Iv~NPPY 310 (384)
T 3ldg_A 257 LDISGFDFD-GRMVEIARKNAREVGLEDVVKLKQMRLQDFKT--NKINGVLISNPPY 310 (384)
T ss_dssp CCEEEEESC-HHHHHHHHHHHHHTTCTTTEEEEECCGGGCCC--CCCSCEEEECCCC
T ss_pred ceEEEEECC-HHHHHHHHHHHHHcCCCCceEEEECChHHCCc--cCCcCEEEECCch
Confidence 579999999 999999999997 787789999999998653 3589999999874
No 257
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.57 E-value=5.2e-07 Score=76.89 Aligned_cols=106 Identities=13% Similarity=0.038 Sum_probs=77.2
Q ss_pred CCC-CCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEE
Q 042616 20 GKR-GKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFV 98 (220)
Q Consensus 20 ~~~-~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v 98 (220)
++. ...+...+.+...+...+..+||||||| +|..|..|+.. ..++|++||.| +.+++.++++ . ..+++++
T Consensus 10 GQnfl~d~~i~~~iv~~~~~~~~~~VLDiG~G-~G~lt~~L~~~---~~~~v~avEid-~~~~~~~~~~-~--~~~v~~i 81 (249)
T 3ftd_A 10 GQHLLVSEGVLKKIAEELNIEEGNTVVEVGGG-TGNLTKVLLQH---PLKKLYVIELD-REMVENLKSI-G--DERLEVI 81 (249)
T ss_dssp CSSCEECHHHHHHHHHHTTCCTTCEEEEEESC-HHHHHHHHTTS---CCSEEEEECCC-HHHHHHHTTS-C--CTTEEEE
T ss_pred cccccCCHHHHHHHHHhcCCCCcCEEEEEcCc-hHHHHHHHHHc---CCCeEEEEECC-HHHHHHHHhc-c--CCCeEEE
Confidence 553 4567778777777777788999999997 99999998864 14799999999 9999999988 3 3579999
Q ss_pred Ecchhhh-hhhcCCCccEEEEcCCCCCccHHHHHHHHHh
Q 042616 99 KGDAQKL-LMGDYRGADFVLIDCNIDIDGHKNVFRAAKE 136 (220)
Q Consensus 99 ~gda~~~-L~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~ 136 (220)
++|+.++ ++.+.+++ .|+-+.+- ......+..+..
T Consensus 82 ~~D~~~~~~~~~~~~~-~vv~NlPy--~i~~~il~~ll~ 117 (249)
T 3ftd_A 82 NEDASKFPFCSLGKEL-KVVGNLPY--NVASLIIENTVY 117 (249)
T ss_dssp CSCTTTCCGGGSCSSE-EEEEECCT--TTHHHHHHHHHH
T ss_pred EcchhhCChhHccCCc-EEEEECch--hccHHHHHHHHh
Confidence 9999875 33322333 56656554 444555444444
No 258
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.54 E-value=8.3e-07 Score=78.82 Aligned_cols=106 Identities=14% Similarity=0.114 Sum_probs=79.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc-ccCCcEEEEEcchhhhhhhcCCCccEEE
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG-RYANCIEFVKGDAQKLLMGDYRGADFVL 117 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~-g~~~~Ve~v~gda~~~L~~~~~~~D~Vf 117 (220)
.+.++||||||| +|..++.|+++.| +-+++..|. |+.++.|++++. +..++|+++.||..+. | ...+|+++
T Consensus 178 ~~~~~v~DvGgG-~G~~~~~l~~~~p--~~~~~~~dl--p~v~~~a~~~~~~~~~~rv~~~~gD~~~~-~--~~~~D~~~ 249 (353)
T 4a6d_A 178 SVFPLMCDLGGG-AGALAKECMSLYP--GCKITVFDI--PEVVWTAKQHFSFQEEEQIDFQEGDFFKD-P--LPEADLYI 249 (353)
T ss_dssp GGCSEEEEETCT-TSHHHHHHHHHCS--SCEEEEEEC--HHHHHHHHHHSCC--CCSEEEEESCTTTS-C--CCCCSEEE
T ss_pred ccCCeEEeeCCC-CCHHHHHHHHhCC--CceeEeccC--HHHHHHHHHhhhhcccCceeeecCccccC-C--CCCceEEE
Confidence 446899999986 9999999999876 467777775 789999999987 4468999999998652 1 34689998
Q ss_pred EcCCCCC---ccHHHHHHHHHhhcCCCCCCEEEEEecCCC
Q 042616 118 IDCNIDI---DGHKNVFRAAKESVMHGSGAGVIVGYNALP 154 (220)
Q Consensus 118 iD~~k~~---~~y~~~l~~l~~~~~L~~~Ggviv~dNv~~ 154 (220)
+-.--+. ++-..+|+.+.+. |+|.|-++|+|.++.
T Consensus 250 ~~~vlh~~~d~~~~~iL~~~~~a--l~pgg~lli~e~~~~ 287 (353)
T 4a6d_A 250 LARVLHDWADGKCSHLLERIYHT--CKPGGGILVIESLLD 287 (353)
T ss_dssp EESSGGGSCHHHHHHHHHHHHHH--CCTTCEEEEEECCCC
T ss_pred eeeecccCCHHHHHHHHHHHHhh--CCCCCEEEEEEeeeC
Confidence 7543310 2335779999999 888666788887764
No 259
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.53 E-value=7.2e-07 Score=77.25 Aligned_cols=122 Identities=11% Similarity=0.051 Sum_probs=81.8
Q ss_pred CCChhHHHHHHHH-HhhCCCCEEEEEcCCchHH----HHHHHHHHcCCC--CcEEEEEeCCchhHHHHHHHHhc------
Q 042616 23 GKEPDVGEFISAL-AAGNNAQLIVMACSSIAVS----RTLALVAAARQT--GGRVVCILSGVIGDIDASKKSLG------ 89 (220)
Q Consensus 23 ~~~p~~~~~L~~L-a~~~~a~~ILEIGtg~~G~----sTl~LA~A~~~~--~grV~tIE~d~~~~~~~Ar~~l~------ 89 (220)
+-+|..=+.+... ....++.+|+++||| +|. .++.|++..+.. +.+|+++|++ +++++.|++++-
T Consensus 87 fRd~~~f~~l~~~llp~~~~~rIld~GCg-TGee~ysiAi~L~e~~~~~~~~~~I~atDis-~~~L~~Ar~~~y~~~~~~ 164 (274)
T 1af7_A 87 FREAHHFPILAEHARRRHGEYRVWSAAAS-TGEEPYSIAITLADALGMAPGRWKVFASDID-TEVLEKARSGIYRLSELK 164 (274)
T ss_dssp TTTTTHHHHHHHHHHHSCSCEEEEESCCT-TTHHHHHHHHHHHHHHCSCTTSEEEEEEESC-HHHHHHHHHTEEEGGGGT
T ss_pred cCChHHHHHHHHHccCCCCCcEEEEeecc-CChhHHHHHHHHHHhcccCCCCeEEEEEECC-HHHHHHHHhcCCchhhhh
Confidence 3444554444432 222245789999996 997 455667665432 2489999999 999999999751
Q ss_pred --------------------------ccCCcEEEEEcchhhh-hhhcCCCccEEEEcCCC---CCccHHHHHHHHHhhcC
Q 042616 90 --------------------------RYANCIEFVKGDAQKL-LMGDYRGADFVLIDCNI---DIDGHKNVFRAAKESVM 139 (220)
Q Consensus 90 --------------------------g~~~~Ve~v~gda~~~-L~~~~~~~D~VfiD~~k---~~~~y~~~l~~l~~~~~ 139 (220)
.+.++|+|.++|..+. ++ ..++||+||.-.-. +.....++++.+...
T Consensus 165 ~~~~~~~~~~f~~~~~~~~~~~~v~~~lr~~V~F~~~dl~~~~~~-~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~-- 241 (274)
T 1af7_A 165 TLSPQQLQRYFMRGTGPHEGLVRVRQELANYVEFSSVNLLEKQYN-VPGPFDAIFCRNVMIYFDKTTQEDILRRFVPL-- 241 (274)
T ss_dssp TSCHHHHHHHEEECCTTSCSEEEECHHHHTTEEEEECCTTCSSCC-CCCCEEEEEECSSGGGSCHHHHHHHHHHHGGG--
T ss_pred cCCHHHHHHHhhccccCCCCceeechhhcccCeEEecccCCCCCC-cCCCeeEEEECCchHhCCHHHHHHHHHHHHHH--
Confidence 0113699999998772 22 13689999973321 112336788888888
Q ss_pred CCCCCEEEEEe
Q 042616 140 HGSGAGVIVGY 150 (220)
Q Consensus 140 L~~~Ggviv~d 150 (220)
|+| ||+++.-
T Consensus 242 L~p-gG~L~lg 251 (274)
T 1af7_A 242 LKP-DGLLFAG 251 (274)
T ss_dssp EEE-EEEEEEC
T ss_pred hCC-CcEEEEE
Confidence 886 8988874
No 260
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.52 E-value=2.7e-07 Score=80.52 Aligned_cols=125 Identities=14% Similarity=0.009 Sum_probs=94.3
Q ss_pred CChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchh
Q 042616 24 KEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQ 103 (220)
Q Consensus 24 ~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~ 103 (220)
.++....++..+.. .++..+||+.+| +|..++ ++++. +.+++.||.+ ++.++..++|++. .++++++.+|+.
T Consensus 76 ~p~~l~~yf~~l~~-~n~~~~LDlfaG-SGaLgi---EaLS~-~d~~vfvE~~-~~a~~~L~~Nl~~-~~~~~V~~~D~~ 147 (283)
T 2oo3_A 76 LPSLFLEYISVIKQ-INLNSTLSYYPG-SPYFAI---NQLRS-QDRLYLCELH-PTEYNFLLKLPHF-NKKVYVNHTDGV 147 (283)
T ss_dssp SCGGGHHHHHHHHH-HSSSSSCCEEEC-HHHHHH---HHSCT-TSEEEEECCS-HHHHHHHTTSCCT-TSCEEEECSCHH
T ss_pred CcHHHHHHHHHHHH-hcCCCceeEeCC-cHHHHH---HHcCC-CCeEEEEeCC-HHHHHHHHHHhCc-CCcEEEEeCcHH
Confidence 44445667777766 566779999986 888777 45554 6899999999 9999999999985 368999999998
Q ss_pred hhhhhcC---CCccEEEEcCCCC-CccHHHHHHHHHhhcCCCCCCEEEEEecCCCCC
Q 042616 104 KLLMGDY---RGADFVLIDCNID-IDGHKNVFRAAKESVMHGSGAGVIVGYNALPKG 156 (220)
Q Consensus 104 ~~L~~~~---~~~D~VfiD~~k~-~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~~~g 156 (220)
..|..+. .+||+||+|++-. ...|.+.++.+.+...+-+.|-++|-+-+..+.
T Consensus 148 ~~L~~l~~~~~~fdLVfiDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~~~ 204 (283)
T 2oo3_A 148 SKLNALLPPPEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVNKA 204 (283)
T ss_dssp HHHHHHCSCTTSCEEEEECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEEEEEESSHH
T ss_pred HHHHHhcCCCCCccEEEECCCCCCCcHHHHHHHHHHHhCccCCCeEEEEEEeccchH
Confidence 8886543 3699999999874 247888888777643345667777777776543
No 261
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.51 E-value=2.6e-07 Score=78.94 Aligned_cols=90 Identities=11% Similarity=-0.119 Sum_probs=67.6
Q ss_pred CChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcE--EEEEeCCchhHHHHHHHHhcccCCcEEEEEcc
Q 042616 24 KEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGR--VVCILSGVIGDIDASKKSLGRYANCIEFVKGD 101 (220)
Q Consensus 24 ~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~gr--V~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gd 101 (220)
+.|...+.+...+...+..+||||||| +|+.|. |+. +++ |++||.| +.+++.+++++... ++++++++|
T Consensus 5 ~d~~i~~~iv~~~~~~~~~~VLEIG~G-~G~lt~-l~~-----~~~~~v~avEid-~~~~~~a~~~~~~~-~~v~~i~~D 75 (252)
T 1qyr_A 5 NDQFVIDSIVSAINPQKGQAMVEIGPG-LAALTE-PVG-----ERLDQLTVIELD-RDLAARLQTHPFLG-PKLTIYQQD 75 (252)
T ss_dssp CCHHHHHHHHHHHCCCTTCCEEEECCT-TTTTHH-HHH-----TTCSCEEEECCC-HHHHHHHHTCTTTG-GGEEEECSC
T ss_pred CCHHHHHHHHHhcCCCCcCEEEEECCC-CcHHHH-hhh-----CCCCeEEEEECC-HHHHHHHHHHhccC-CceEEEECc
Confidence 567777777777777777899999997 999999 654 245 9999999 99999999988643 589999999
Q ss_pred hhhh-hhhcC---CCccEEEEcCCC
Q 042616 102 AQKL-LMGDY---RGADFVLIDCNI 122 (220)
Q Consensus 102 a~~~-L~~~~---~~~D~VfiD~~k 122 (220)
+.++ ++... +..|.|+-..+-
T Consensus 76 ~~~~~~~~~~~~~~~~~~vvsNlPY 100 (252)
T 1qyr_A 76 AMTFNFGELAEKMGQPLRVFGNLPY 100 (252)
T ss_dssp GGGCCHHHHHHHHTSCEEEEEECCT
T ss_pred hhhCCHHHhhcccCCceEEEECCCC
Confidence 9874 33321 234566655544
No 262
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.50 E-value=3.1e-07 Score=86.74 Aligned_cols=73 Identities=14% Similarity=0.079 Sum_probs=61.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhc-CCCccE
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGD-YRGADF 115 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~-~~~~D~ 115 (220)
.++.+||||||| .|..+.+||+. |.+|++||.+ +.+++.||.+.. +. -+|++++++++++.... .+.||+
T Consensus 65 ~~~~~vLDvGCG-~G~~~~~la~~----ga~V~giD~~-~~~i~~a~~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~fD~ 137 (569)
T 4azs_A 65 GRPLNVLDLGCA-QGFFSLSLASK----GATIVGIDFQ-QENINVCRALAEENPD-FAAEFRVGRIEEVIAALEEGEFDL 137 (569)
T ss_dssp TSCCEEEEETCT-TSHHHHHHHHT----TCEEEEEESC-HHHHHHHHHHHHTSTT-SEEEEEECCHHHHHHHCCTTSCSE
T ss_pred CCCCeEEEECCC-CcHHHHHHHhC----CCEEEEECCC-HHHHHHHHHHHHhcCC-CceEEEECCHHHHhhhccCCCccE
Confidence 467899999997 89999999974 8899999999 999999999886 43 36999999999986543 468999
Q ss_pred EEE
Q 042616 116 VLI 118 (220)
Q Consensus 116 Vfi 118 (220)
|+.
T Consensus 138 v~~ 140 (569)
T 4azs_A 138 AIG 140 (569)
T ss_dssp EEE
T ss_pred EEE
Confidence 974
No 263
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.48 E-value=6.7e-07 Score=80.39 Aligned_cols=119 Identities=15% Similarity=0.060 Sum_probs=88.2
Q ss_pred HHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--cc-----CCcEEEEEc
Q 042616 28 VGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RY-----ANCIEFVKG 100 (220)
Q Consensus 28 ~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~-----~~~Ve~v~g 100 (220)
...+...+....+..+|||++++ .|-=|+.||+.+. +|+|+++|.+ +.+++..+++++ +. ..+|++.+.
T Consensus 136 aS~l~~~~L~~~pg~~VLD~CAa-PGGKT~~la~~~~--~~~l~A~D~~-~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~ 211 (359)
T 4fzv_A 136 ASLLPVLALGLQPGDIVLDLCAA-PGGKTLALLQTGC--CRNLAANDLS-PSRIARLQKILHSYVPEEIRDGNQVRVTSW 211 (359)
T ss_dssp GGHHHHHHHCCCTTEEEEESSCT-TCHHHHHHHHTTC--EEEEEEECSC-HHHHHHHHHHHHHHSCTTTTTSSSEEEECC
T ss_pred HHHHHHHHhCCCCCCEEEEecCC-ccHHHHHHHHhcC--CCcEEEEcCC-HHHHHHHHHHHHHhhhhhhccCCceEEEeC
Confidence 45566666667778999999985 7888888887543 5899999999 999999999986 32 257999999
Q ss_pred chhhhhhhcCCCccEEEEcCCCCC---------c------------cH----HHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 101 DAQKLLMGDYRGADFVLIDCNIDI---------D------------GH----KNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 101 da~~~L~~~~~~~D~VfiD~~k~~---------~------------~y----~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
|+..+-+...+.||.|++|++=.. . .. .++++.+.+. |+| ||+||.-...
T Consensus 212 D~~~~~~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~--lkp-GG~LVYsTCS 286 (359)
T 4fzv_A 212 DGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLA--TKP-GGHVVYSTCS 286 (359)
T ss_dssp CGGGHHHHSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHT--EEE-EEEEEEEESC
T ss_pred chhhcchhccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhc--CCC-CcEEEEEeCC
Confidence 998865443578999999987310 0 01 2455666666 776 9988876554
No 264
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.48 E-value=2.6e-07 Score=84.60 Aligned_cols=129 Identities=8% Similarity=-0.071 Sum_probs=94.9
Q ss_pred CCCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCC-----------CcEEEEEeCCchhHHHHHHHHhc
Q 042616 21 KRGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQT-----------GGRVVCILSGVIGDIDASKKSLG 89 (220)
Q Consensus 21 ~~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~-----------~grV~tIE~d~~~~~~~Ar~~l~ 89 (220)
+...++.+.+++..++...+..+|+|.||| +|.+.+.++..+... ..+++++|.+ +..++.|+.++.
T Consensus 152 ~fyTP~~v~~~mv~~l~~~~~~~VlDpacG-sG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~-~~~~~lA~~nl~ 229 (445)
T 2okc_A 152 QYFTPRPLIQAMVDCINPQMGETVCDPACG-TGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNT-PLVVTLASMNLY 229 (445)
T ss_dssp GGCCCHHHHHHHHHHHCCCTTCCEEETTCT-TCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESC-HHHHHHHHHHHH
T ss_pred cccCcHHHHHHHHHHhCCCCCCEEeccCCC-cchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCC-HHHHHHHHHHHH
Confidence 446677788999888877777899999997 899988888765321 3679999999 999999999886
Q ss_pred --ccCC-cEEEEEcchhhhhhhcCCCccEEEEcCCCCCc------------------cHHHHHHHHHhhcCCCCCCEEE-
Q 042616 90 --RYAN-CIEFVKGDAQKLLMGDYRGADFVLIDCNIDID------------------GHKNVFRAAKESVMHGSGAGVI- 147 (220)
Q Consensus 90 --g~~~-~Ve~v~gda~~~L~~~~~~~D~VfiD~~k~~~------------------~y~~~l~~l~~~~~L~~~Ggvi- 147 (220)
++.. ++.++++|+..... ...||+|+.+++-... ....+++.+... |+| ||.+
T Consensus 230 l~g~~~~~~~i~~gD~l~~~~--~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~--Lk~-gG~~a 304 (445)
T 2okc_A 230 LHGIGTDRSPIVCEDSLEKEP--STLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLM--LKT-GGRAA 304 (445)
T ss_dssp HTTCCSSCCSEEECCTTTSCC--SSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHH--EEE-EEEEE
T ss_pred HhCCCcCCCCEeeCCCCCCcc--cCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHH--hcc-CCEEE
Confidence 6632 68899999877532 2489999998654110 023678888888 876 6553
Q ss_pred --EEecCCCCC
Q 042616 148 --VGYNALPKG 156 (220)
Q Consensus 148 --v~dNv~~~g 156 (220)
+.+++++.+
T Consensus 305 ~V~p~~~L~~~ 315 (445)
T 2okc_A 305 VVLPDNVLFEA 315 (445)
T ss_dssp EEEEHHHHHCS
T ss_pred EEECCcccccC
Confidence 445556554
No 265
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.45 E-value=9.6e-07 Score=79.93 Aligned_cols=104 Identities=13% Similarity=0.081 Sum_probs=77.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc----c-c----CCcEEEEEcchhhhhhhc
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG----R-Y----ANCIEFVKGDAQKLLMGD 109 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~----g-~----~~~Ve~v~gda~~~L~~~ 109 (220)
.+|++||-||.| .|..+-.+.+- + ..+|+.||+| |+.++.|++++. + + .++++++.+|+.+++.+.
T Consensus 204 ~~pkrVLIIGgG-dG~~~revlkh--~-~~~V~~VEID-p~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~ 278 (381)
T 3c6k_A 204 YTGKDVLILGGG-DGGILCEIVKL--K-PKMVTMVEID-QMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRY 278 (381)
T ss_dssp CTTCEEEEEECT-TCHHHHHHHTT--C-CSEEEEEESC-HHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHH
T ss_pred CCCCeEEEECCC-cHHHHHHHHhc--C-CceeEEEccC-HHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhh
Confidence 457999999954 77766655542 3 4799999999 999999999874 1 1 245999999999998542
Q ss_pred ---CCCccEEEEcCCCCC----------ccH-HHHHHHHHhhcCCCCCCEEEEEe
Q 042616 110 ---YRGADFVLIDCNIDI----------DGH-KNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 110 ---~~~~D~VfiD~~k~~----------~~y-~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
.+.||+|++|..... ..| .++++.+.+. |+| ||+++..
T Consensus 279 ~~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~--L~p-~GVlv~Q 330 (381)
T 3c6k_A 279 AKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKV--LKQ-DGKYFTQ 330 (381)
T ss_dssp HHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHT--EEE-EEEEEEE
T ss_pred hhccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHh--cCC-CCEEEEe
Confidence 467999999964200 122 5778899998 876 9999874
No 266
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.42 E-value=1.1e-06 Score=82.84 Aligned_cols=132 Identities=10% Similarity=-0.020 Sum_probs=95.5
Q ss_pred CCCCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCC----------------cEEEEEeCCchhHHHH
Q 042616 20 GKRGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTG----------------GRVVCILSGVIGDIDA 83 (220)
Q Consensus 20 ~~~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~----------------grV~tIE~d~~~~~~~ 83 (220)
++...++.+.++|..++...+..+|+|.+|| +|.+.+.++..+.... .+++++|.+ +..++.
T Consensus 149 G~fyTP~~iv~~mv~~l~p~~~~~VlDPaCG-SG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid-~~~~~l 226 (541)
T 2ar0_A 149 GQYFTPRPLIKTIIHLLKPQPREVVQDPAAG-TAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELV-PGTRRL 226 (541)
T ss_dssp -CCCCCHHHHHHHHHHHCCCTTCCEEETTCT-TTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESC-HHHHHH
T ss_pred CeeeCCHHHHHHHHHHhccCCCCeEecCCcc-cchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCC-HHHHHH
Confidence 4566777788998888877777899999997 8998888877654322 379999999 999999
Q ss_pred HHHHhc--ccCC----cEEEEEcchhhhhhhcCCCccEEEEcCCCCC---------------ccHHHHHHHHHhhcCCCC
Q 042616 84 SKKSLG--RYAN----CIEFVKGDAQKLLMGDYRGADFVLIDCNIDI---------------DGHKNVFRAAKESVMHGS 142 (220)
Q Consensus 84 Ar~~l~--g~~~----~Ve~v~gda~~~L~~~~~~~D~VfiD~~k~~---------------~~y~~~l~~l~~~~~L~~ 142 (220)
|+.++. +... ++.++++|+....+.....||+|+.+++-.. ..+..+++.+... |+|
T Consensus 227 A~~nl~l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~--Lk~ 304 (541)
T 2ar0_A 227 ALMNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIET--LHP 304 (541)
T ss_dssp HHHHHHTTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHH--EEE
T ss_pred HHHHHHHhCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHH--hCC
Confidence 999885 6533 2889999987654322468999999876411 1123578888888 876
Q ss_pred CCEE---EEEecCCCCC
Q 042616 143 GAGV---IVGYNALPKG 156 (220)
Q Consensus 143 ~Ggv---iv~dNv~~~g 156 (220)
||. |+.+.+++.+
T Consensus 305 -gGr~a~V~p~~~L~~~ 320 (541)
T 2ar0_A 305 -GGRAAVVVPDNVLFEG 320 (541)
T ss_dssp -EEEEEEEEEHHHHHCC
T ss_pred -CCEEEEEecCcceecC
Confidence 654 4445555554
No 267
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.40 E-value=1.1e-06 Score=76.69 Aligned_cols=93 Identities=11% Similarity=-0.077 Sum_probs=67.1
Q ss_pred hCCCCEEEEEcCC-----chHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEE-EEcchhhhhhhcCC
Q 042616 38 GNNAQLIVMACSS-----IAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEF-VKGDAQKLLMGDYR 111 (220)
Q Consensus 38 ~~~a~~ILEIGtg-----~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~-v~gda~~~L~~~~~ 111 (220)
..+..+|||+||| ++|. ..++..+++ +++|++||.+ +. + .++++ +++|+.+.. ..+
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~-~~~V~gvDis-~~--------v----~~v~~~i~gD~~~~~--~~~ 122 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPT-GTLLVDSDLN-DF--------V----SDADSTLIGDCATVH--TAN 122 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCT-TCEEEEEESS-CC--------B----CSSSEEEESCGGGCC--CSS
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCC-CCEEEEEECC-CC--------C----CCCEEEEECccccCC--ccC
Confidence 3556799999993 1576 445655554 6899999999 66 2 46888 999998742 136
Q ss_pred CccEEEEcCCCC------------CccHHHHHHHHHhhcCCCCCCEEEEEec
Q 042616 112 GADFVLIDCNID------------IDGHKNVFRAAKESVMHGSGAGVIVGYN 151 (220)
Q Consensus 112 ~~D~VfiD~~k~------------~~~y~~~l~~l~~~~~L~~~Ggviv~dN 151 (220)
+||+|+.|.... ...+...++.+.+. |+| ||.+++..
T Consensus 123 ~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~--Lkp-GG~~v~~~ 171 (290)
T 2xyq_A 123 KWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQK--LAL-GGSIAVKI 171 (290)
T ss_dssp CEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHH--EEE-EEEEEEEE
T ss_pred cccEEEEcCCccccccccccccchHHHHHHHHHHHHHh--cCC-CcEEEEEE
Confidence 899999986431 01245788999998 886 88888863
No 268
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.39 E-value=1.5e-07 Score=81.53 Aligned_cols=97 Identities=12% Similarity=-0.108 Sum_probs=66.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHh-c--ccCCcEEEE--EcchhhhhhhcCCCcc
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSL-G--RYANCIEFV--KGDAQKLLMGDYRGAD 114 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l-~--g~~~~Ve~v--~gda~~~L~~~~~~~D 114 (220)
+.++|||+||| +|..|..|+.. ++|++||.+ + ++..+++.. . ....+|+++ ++|+.+ ++ .++||
T Consensus 82 ~g~~VLDlGcG-tG~~s~~la~~-----~~V~gVD~s-~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~-l~--~~~fD 150 (276)
T 2wa2_A 82 LKGTVVDLGCG-RGSWSYYAASQ-----PNVREVKAY-T-LGTSGHEKPRLVETFGWNLITFKSKVDVTK-ME--PFQAD 150 (276)
T ss_dssp CCEEEEEESCT-TCHHHHHHHTS-----TTEEEEEEE-C-CCCTTSCCCCCCCCTTGGGEEEECSCCGGG-CC--CCCCS
T ss_pred CCCEEEEeccC-CCHHHHHHHHc-----CCEEEEECc-h-hhhhhhhchhhhhhcCCCeEEEeccCcHhh-CC--CCCcC
Confidence 46799999997 99999988863 799999999 7 433332221 1 122278999 999887 44 46899
Q ss_pred EEEEcCCCCCccH-------HHHHHHHHhhcCCCCCCE--EEEEe
Q 042616 115 FVLIDCNIDIDGH-------KNVFRAAKESVMHGSGAG--VIVGY 150 (220)
Q Consensus 115 ~VfiD~~k~~~~y-------~~~l~~l~~~~~L~~~Gg--viv~d 150 (220)
+|+.|...-...+ ...++.+.+. |+| || .++++
T Consensus 151 ~Vvsd~~~~~~~~~~d~~~~l~~L~~~~r~--Lkp-GG~~~~v~~ 192 (276)
T 2wa2_A 151 TVLCDIGESNPTAAVEASRTLTVLNVISRW--LEY-NQGCGFCVK 192 (276)
T ss_dssp EEEECCCCCCSCHHHHHHHHHHHHHHHHHH--HHH-STTCEEEEE
T ss_pred EEEECCCcCCCchhhhHHHHHHHHHHHHHH--hcc-CCCcEEEEE
Confidence 9999975200121 1367778787 776 77 77765
No 269
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.36 E-value=2.7e-06 Score=72.85 Aligned_cols=114 Identities=10% Similarity=-0.049 Sum_probs=76.5
Q ss_pred hHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhh
Q 042616 27 DVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLL 106 (220)
Q Consensus 27 ~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L 106 (220)
.--+|...+.....|.+||||||| +|..++.++ + ..+++++|+| +.+++.+++++.....+..+.+.|.....
T Consensus 92 ~ld~fY~~i~~~~~p~~VLDlGCG-~gpLal~~~----~-~~~y~a~DId-~~~i~~ar~~~~~~g~~~~~~v~D~~~~~ 164 (253)
T 3frh_A 92 ELDTLYDFIFSAETPRRVLDIACG-LNPLALYER----G-IASVWGCDIH-QGLGDVITPFAREKDWDFTFALQDVLCAP 164 (253)
T ss_dssp GHHHHHHHHTSSCCCSEEEEETCT-TTHHHHHHT----T-CSEEEEEESB-HHHHHHHHHHHHHTTCEEEEEECCTTTSC
T ss_pred hHHHHHHHHhcCCCCCeEEEecCC-ccHHHHHhc----c-CCeEEEEeCC-HHHHHHHHHHHHhcCCCceEEEeecccCC
Confidence 334455544444569999999996 898887655 2 7899999999 99999999998743357899999987654
Q ss_pred hhcCCCccEEEEcCC-C--CCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 107 MGDYRGADFVLIDCN-I--DIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 107 ~~~~~~~D~VfiD~~-k--~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
+ .+++|+|++--- + +...-...++.+. . |++ ++++|.-.+-
T Consensus 165 ~--~~~~DvvLllk~lh~LE~q~~~~~~~ll~-a--L~~-~~vvVsfPtk 208 (253)
T 3frh_A 165 P--AEAGDLALIFKLLPLLEREQAGSAMALLQ-S--LNT-PRMAVSFPTR 208 (253)
T ss_dssp C--CCBCSEEEEESCHHHHHHHSTTHHHHHHH-H--CBC-SEEEEEEECC
T ss_pred C--CCCcchHHHHHHHHHhhhhchhhHHHHHH-H--hcC-CCEEEEcChH
Confidence 4 368999975411 1 0001112333333 4 666 6777765543
No 270
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.35 E-value=2.1e-07 Score=80.02 Aligned_cols=114 Identities=8% Similarity=-0.077 Sum_probs=72.9
Q ss_pred CCChhHHHHHHHHHh--hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHh---cccCCcEEE
Q 042616 23 GKEPDVGEFISALAA--GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSL---GRYANCIEF 97 (220)
Q Consensus 23 ~~~p~~~~~L~~La~--~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l---~g~~~~Ve~ 97 (220)
........+...+.. ..+.++|||+||| +|..|..++.. ++|++||.+ + ++..+++.. +....+|++
T Consensus 55 ~~sR~a~KL~~i~~~~~~~~g~~VLDlGcG-tG~~s~~la~~-----~~V~gvD~s-~-m~~~a~~~~~~~~~~~~~v~~ 126 (265)
T 2oxt_A 55 SVSRGTAKLAWMEERGYVELTGRVVDLGCG-RGGWSYYAASR-----PHVMDVRAY-T-LGVGGHEVPRITESYGWNIVK 126 (265)
T ss_dssp CSSTHHHHHHHHHHHTSCCCCEEEEEESCT-TSHHHHHHHTS-----TTEEEEEEE-C-CCCSSCCCCCCCCBTTGGGEE
T ss_pred ccchHHHHHHHHHHcCCCCCCCEEEEeCcC-CCHHHHHHHHc-----CcEEEEECc-h-hhhhhhhhhhhhhccCCCeEE
Confidence 344444333333332 2346799999996 99999888763 799999999 6 332222211 112226899
Q ss_pred E--EcchhhhhhhcCCCccEEEEcCCCCCccH-------HHHHHHHHhhcCCCCCCE--EEEEe
Q 042616 98 V--KGDAQKLLMGDYRGADFVLIDCNIDIDGH-------KNVFRAAKESVMHGSGAG--VIVGY 150 (220)
Q Consensus 98 v--~gda~~~L~~~~~~~D~VfiD~~k~~~~y-------~~~l~~l~~~~~L~~~Gg--viv~d 150 (220)
+ ++|+.+ ++ .++||+|+.|...-...+ ...++.+.+. |+| || .++++
T Consensus 127 ~~~~~D~~~-l~--~~~fD~V~sd~~~~~~~~~~d~~~~l~~L~~~~r~--Lkp-GG~~~fv~k 184 (265)
T 2oxt_A 127 FKSRVDIHT-LP--VERTDVIMCDVGESSPKWSVESERTIKILELLEKW--KVK-NPSADFVVK 184 (265)
T ss_dssp EECSCCTTT-SC--CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHH--HHH-CTTCEEEEE
T ss_pred EecccCHhH-CC--CCCCcEEEEeCcccCCccchhHHHHHHHHHHHHHH--hcc-CCCeEEEEE
Confidence 9 899887 33 468999999975211221 1367778787 876 77 77775
No 271
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.33 E-value=6.7e-08 Score=81.40 Aligned_cols=92 Identities=10% Similarity=-0.021 Sum_probs=71.7
Q ss_pred CCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcch
Q 042616 23 GKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDA 102 (220)
Q Consensus 23 ~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda 102 (220)
.+.+...+.+...+...+..+||||||| +|..|..|+.. +++|++||.+ +.+++.|+++++. .++++++++|+
T Consensus 12 l~~~~~~~~i~~~~~~~~~~~VLDiG~G-~G~~~~~l~~~----~~~v~~id~~-~~~~~~a~~~~~~-~~~v~~~~~D~ 84 (245)
T 1yub_A 12 LTSEKVLNQIIKQLNLKETDTVYEIGTG-KGHLTTKLAKI----SKQVTSIELD-SHLFNLSSEKLKL-NTRVTLIHQDI 84 (245)
T ss_dssp CCCTTTHHHHHHHCCCCSSEEEEECSCC-CSSCSHHHHHH----SSEEEESSSS-CSSSSSSSCTTTT-CSEEEECCSCC
T ss_pred CCCHHHHHHHHHhcCCCCCCEEEEEeCC-CCHHHHHHHHh----CCeEEEEECC-HHHHHHHHHHhcc-CCceEEEECCh
Confidence 5667777777777677778899999997 99999999975 4799999999 9999999888763 36899999999
Q ss_pred hhhhhhcCCCccEEEEcCCC
Q 042616 103 QKLLMGDYRGADFVLIDCNI 122 (220)
Q Consensus 103 ~~~L~~~~~~~D~VfiD~~k 122 (220)
.+.-....++| .|+.+.+-
T Consensus 85 ~~~~~~~~~~f-~vv~n~Py 103 (245)
T 1yub_A 85 LQFQFPNKQRY-KIVGNIPY 103 (245)
T ss_dssp TTTTCCCSSEE-EEEEECCS
T ss_pred hhcCcccCCCc-EEEEeCCc
Confidence 87531112467 67766654
No 272
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.32 E-value=3.2e-07 Score=80.45 Aligned_cols=112 Identities=11% Similarity=0.009 Sum_probs=71.7
Q ss_pred CChhHHHHHHHHHh--hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeC----CchhHHHHHHHHhccc-CCcEE
Q 042616 24 KEPDVGEFISALAA--GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILS----GVIGDIDASKKSLGRY-ANCIE 96 (220)
Q Consensus 24 ~~p~~~~~L~~La~--~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~----d~~~~~~~Ar~~l~g~-~~~Ve 96 (220)
.....-+++..+.. ..+.++|||+||| +|..|..|++. ++|++||. . +..++.+ ..+.. .++|+
T Consensus 64 ~sR~a~KL~~i~~~~~~~~g~~VLDlGcG-~G~~s~~la~~-----~~V~gvD~~~~~~-~~~~~~~--~~~~~~~~~v~ 134 (305)
T 2p41_A 64 VSRGSAKLRWFVERNLVTPEGKVVDLGCG-RGGWSYYCGGL-----KNVREVKGLTKGG-PGHEEPI--PMSTYGWNLVR 134 (305)
T ss_dssp SSTHHHHHHHHHHTTSSCCCEEEEEETCT-TSHHHHHHHTS-----TTEEEEEEECCCS-TTSCCCC--CCCSTTGGGEE
T ss_pred cccHHHHHHHHHHcCCCCCCCEEEEEcCC-CCHHHHHHHhc-----CCEEEEeccccCc-hhHHHHH--HhhhcCCCCeE
Confidence 44444444443332 2345799999996 99999988863 68999998 4 3322111 11211 15699
Q ss_pred EEEc-chhhhhhhcCCCccEEEEcCCCCCccH----H---HHHHHHHhhcCCCCCCEEEEEe
Q 042616 97 FVKG-DAQKLLMGDYRGADFVLIDCNIDIDGH----K---NVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 97 ~v~g-da~~~L~~~~~~~D~VfiD~~k~~~~y----~---~~l~~l~~~~~L~~~Ggviv~d 150 (220)
++++ |+.+. + ..+||+|+.|.......+ . ..++.+.+. |+| ||.++++
T Consensus 135 ~~~~~D~~~l-~--~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~--Lkp-GG~~v~k 190 (305)
T 2p41_A 135 LQSGVDVFFI-P--PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENW--LSN-NTQFCVK 190 (305)
T ss_dssp EECSCCTTTS-C--CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHH--CCT-TCEEEEE
T ss_pred EEeccccccC-C--cCCCCEEEECCccccCcchhhHHHHHHHHHHHHHH--hCC-CCEEEEE
Confidence 9999 88764 3 368999999976410111 1 457777787 876 8888885
No 273
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.32 E-value=1.2e-06 Score=78.16 Aligned_cols=99 Identities=14% Similarity=0.066 Sum_probs=72.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccEEEE
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFVLI 118 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~Vfi 118 (220)
.+..+||||||| +|..+..|++..+ +.+++.+|. +..++.|++. ++|+++.+|..+-+| .. |+|++
T Consensus 200 ~~~~~vlDvG~G-~G~~~~~l~~~~p--~~~~~~~D~--~~~~~~a~~~-----~~v~~~~~D~~~~~p---~~-D~v~~ 265 (364)
T 3p9c_A 200 EGLGTLVDVGGG-VGATVAAIAAHYP--TIKGVNFDL--PHVISEAPQF-----PGVTHVGGDMFKEVP---SG-DTILM 265 (364)
T ss_dssp TTCSEEEEETCT-TSHHHHHHHHHCT--TCEEEEEEC--HHHHTTCCCC-----TTEEEEECCTTTCCC---CC-SEEEE
T ss_pred cCCCEEEEeCCC-CCHHHHHHHHHCC--CCeEEEecC--HHHHHhhhhc-----CCeEEEeCCcCCCCC---CC-CEEEe
Confidence 346899999986 9999999999875 478999998 5666555432 689999999987444 23 99998
Q ss_pred cCCCC---CccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 119 DCNID---IDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 119 D~~k~---~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
-.-.+ ..+...+++.+.+. |+|.|-+++.|.+.
T Consensus 266 ~~vlh~~~d~~~~~~L~~~~~~--L~pgG~l~i~e~~~ 301 (364)
T 3p9c_A 266 KWILHDWSDQHCATLLKNCYDA--LPAHGKVVLVQCIL 301 (364)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHH--SCTTCEEEEEECCB
T ss_pred hHHhccCCHHHHHHHHHHHHHH--cCCCCEEEEEEecc
Confidence 55441 03346789999999 88744455655554
No 274
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.31 E-value=1.3e-06 Score=77.86 Aligned_cols=98 Identities=15% Similarity=0.072 Sum_probs=71.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccEEEEc
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFVLID 119 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~VfiD 119 (220)
+..+||||||| +|..+..|++..+ +.+++.+|. +..++.|++. .+|+++.+|..+.+| .. |+|++-
T Consensus 203 ~~~~vlDvG~G-~G~~~~~l~~~~p--~~~~~~~D~--~~~~~~a~~~-----~~v~~~~~d~~~~~p---~~-D~v~~~ 268 (368)
T 3reo_A 203 GLTTIVDVGGG-TGAVASMIVAKYP--SINAINFDL--PHVIQDAPAF-----SGVEHLGGDMFDGVP---KG-DAIFIK 268 (368)
T ss_dssp TCSEEEEETCT-TSHHHHHHHHHCT--TCEEEEEEC--HHHHTTCCCC-----TTEEEEECCTTTCCC---CC-SEEEEE
T ss_pred CCCEEEEeCCC-cCHHHHHHHHhCC--CCEEEEEeh--HHHHHhhhhc-----CCCEEEecCCCCCCC---CC-CEEEEe
Confidence 46899999996 9999999999875 578999998 5666555432 579999999987444 23 999986
Q ss_pred CCCCC---ccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 120 CNIDI---DGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 120 ~~k~~---~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
.-.+. .+...+++.+.+. |+|.|-+++.|.+.
T Consensus 269 ~vlh~~~~~~~~~~l~~~~~~--L~pgG~l~i~e~~~ 303 (368)
T 3reo_A 269 WICHDWSDEHCLKLLKNCYAA--LPDHGKVIVAEYIL 303 (368)
T ss_dssp SCGGGBCHHHHHHHHHHHHHH--SCTTCEEEEEECCC
T ss_pred chhhcCCHHHHHHHHHHHHHH--cCCCCEEEEEEecc
Confidence 54410 2335779999998 88744455665554
No 275
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.29 E-value=1.2e-06 Score=84.18 Aligned_cols=101 Identities=13% Similarity=0.141 Sum_probs=74.6
Q ss_pred CCEEEEEcCCchHHHHHHHHHHcCCCCc--EEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhcCCCccEE
Q 042616 41 AQLIVMACSSIAVSRTLALVAAARQTGG--RVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGDYRGADFV 116 (220)
Q Consensus 41 a~~ILEIGtg~~G~sTl~LA~A~~~~~g--rV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~~~~~D~V 116 (220)
.+.|+++||| +|......+.|+...+. +|++||.+ + ++..|++..+ ++.++|++++||.+++ .+.+++|+|
T Consensus 358 ~~vVldVGaG-rGpLv~~al~A~a~~~~~vkVyAVEkn-p-~A~~a~~~v~~N~~~dkVtVI~gd~eev--~LPEKVDII 432 (637)
T 4gqb_A 358 VQVLMVLGAG-RGPLVNASLRAAKQADRRIKLYAVEKN-P-NAVVTLENWQFEEWGSQVTVVSSDMREW--VAPEKADII 432 (637)
T ss_dssp EEEEEEESCT-TSHHHHHHHHHHHHTTCEEEEEEEESC-H-HHHHHHHHHHHHTTGGGEEEEESCTTTC--CCSSCEEEE
T ss_pred CcEEEEECCC-CcHHHHHHHHHHHhcCCCcEEEEEECC-H-HHHHHHHHHHhccCCCeEEEEeCcceec--cCCcccCEE
Confidence 4578999997 99886665555554333 68999999 6 6777888776 7889999999999986 335789999
Q ss_pred EEc---CCCCCccHHHHHHHHHhhcCCCCCCEEEEE
Q 042616 117 LID---CNIDIDGHKNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 117 fiD---~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
+-. .--.++.-++++....+. |+| ||+++=
T Consensus 433 VSEwMG~fLl~E~mlevL~Ardr~--LKP-gGimiP 465 (637)
T 4gqb_A 433 VSELLGSFADNELSPECLDGAQHF--LKD-DGVSIP 465 (637)
T ss_dssp ECCCCBTTBGGGCHHHHHHHHGGG--EEE-EEEEES
T ss_pred EEEcCcccccccCCHHHHHHHHHh--cCC-CcEEcc
Confidence 833 222224557788877777 876 888753
No 276
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.26 E-value=1.8e-06 Score=74.88 Aligned_cols=117 Identities=10% Similarity=0.047 Sum_probs=80.3
Q ss_pred hhHHHHHHHHHhh-CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhh
Q 042616 26 PDVGEFISALAAG-NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQK 104 (220)
Q Consensus 26 p~~~~~L~~La~~-~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~ 104 (220)
|..-+|...+... ..|.+||||||| .|..++.++...+ ..+++++|+| +.+++.+++|+..+.-..++.+.|...
T Consensus 117 p~lD~fY~~i~~~i~~p~~VLDLGCG-~GpLAl~~~~~~p--~a~y~a~DId-~~~le~a~~~l~~~g~~~~~~v~D~~~ 192 (281)
T 3lcv_B 117 PHLDEFYRELFRHLPRPNTLRDLACG-LNPLAAPWMGLPA--ETVYIASDID-ARLVGFVDEALTRLNVPHRTNVADLLE 192 (281)
T ss_dssp GGHHHHHHHHGGGSCCCSEEEETTCT-TGGGCCTTTTCCT--TCEEEEEESB-HHHHHHHHHHHHHTTCCEEEEECCTTT
T ss_pred HhHHHHHHHHHhccCCCceeeeeccC-ccHHHHHHHhhCC--CCEEEEEeCC-HHHHHHHHHHHHhcCCCceEEEeeecc
Confidence 4445565555554 458999999997 9999988776433 6899999999 999999999997322347888888766
Q ss_pred hhhhcCCCccEEEEcCCC---CCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 105 LLMGDYRGADFVLIDCNI---DIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 105 ~L~~~~~~~D~VfiD~~k---~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
-.| ..+||++++---- +...=...|+ +... |++ ++++|.-.+
T Consensus 193 ~~p--~~~~DvaL~lkti~~Le~q~kg~g~~-ll~a--L~~-~~vvVSfp~ 237 (281)
T 3lcv_B 193 DRL--DEPADVTLLLKTLPCLETQQRGSGWE-VIDI--VNS-PNIVVTFPT 237 (281)
T ss_dssp SCC--CSCCSEEEETTCHHHHHHHSTTHHHH-HHHH--SSC-SEEEEEEEC
T ss_pred cCC--CCCcchHHHHHHHHHhhhhhhHHHHH-HHHH--hCC-CCEEEeccc
Confidence 544 4789999854322 0000112344 4444 666 888887777
No 277
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.21 E-value=9.1e-06 Score=78.79 Aligned_cols=97 Identities=10% Similarity=-0.035 Sum_probs=74.4
Q ss_pred CChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcC---------------------------------------
Q 042616 24 KEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAAR--------------------------------------- 64 (220)
Q Consensus 24 ~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~--------------------------------------- 64 (220)
+.+..+..|-.++.-.+...+||.+|| +|...+.+|..+.
T Consensus 174 l~e~LAa~ll~~~~~~~~~~llDP~CG-SGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~ 252 (703)
T 3v97_A 174 IKETLAAAIVMRSGWQPGTPLLDPMCG-SGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGL 252 (703)
T ss_dssp SCHHHHHHHHHHTTCCTTSCEEETTCT-TSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHhhCCCCCCeEEecCCC-CcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhcc
Confidence 445566666666555566789999997 8998887665431
Q ss_pred -CCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhhhhhcC-CCccEEEEcCCC
Q 042616 65 -QTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKLLMGDY-RGADFVLIDCNI 122 (220)
Q Consensus 65 -~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~L~~~~-~~~D~VfiD~~k 122 (220)
....+++++|.| +.+++.|++|+. |+.+.|+|.++|+.++.+... ++||+|+.+++-
T Consensus 253 ~~~~~~i~G~Did-~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPY 313 (703)
T 3v97_A 253 AEYSSHFYGSDSD-ARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPY 313 (703)
T ss_dssp HHCCCCEEEEESC-HHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCC
T ss_pred ccCCccEEEEECC-HHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCc
Confidence 113589999999 999999999997 887789999999998643322 379999999874
No 278
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.18 E-value=2.4e-06 Score=75.27 Aligned_cols=99 Identities=13% Similarity=0.111 Sum_probs=71.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccEEEE
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFVLI 118 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~Vfi 118 (220)
.+..+||||||| +|..+..|++..+ +.+++.+|. +.+++.|++ . .+|+++.+|..+.+| .||+|++
T Consensus 187 ~~~~~vlDvG~G-~G~~~~~l~~~~p--~~~~~~~D~--~~~~~~a~~----~-~~v~~~~~d~~~~~p----~~D~v~~ 252 (352)
T 1fp2_A 187 DGLESIVDVGGG-TGTTAKIICETFP--KLKCIVFDR--PQVVENLSG----S-NNLTYVGGDMFTSIP----NADAVLL 252 (352)
T ss_dssp TTCSEEEEETCT-TSHHHHHHHHHCT--TCEEEEEEC--HHHHTTCCC----B-TTEEEEECCTTTCCC----CCSEEEE
T ss_pred ccCceEEEeCCC-ccHHHHHHHHHCC--CCeEEEeeC--HHHHhhccc----C-CCcEEEeccccCCCC----CccEEEe
Confidence 356899999996 9999999998765 579999999 577766654 2 359999999976333 4999998
Q ss_pred cCCCCC---ccHHHHHHHHHhhcCCCC---CCEEEEEecCC
Q 042616 119 DCNIDI---DGHKNVFRAAKESVMHGS---GAGVIVGYNAL 153 (220)
Q Consensus 119 D~~k~~---~~y~~~l~~l~~~~~L~~---~Ggviv~dNv~ 153 (220)
-.--.. .....+++.+.+. |+| .|-+++.+.+.
T Consensus 253 ~~~lh~~~d~~~~~~l~~~~~~--L~p~~~gG~l~i~e~~~ 291 (352)
T 1fp2_A 253 KYILHNWTDKDCLRILKKCKEA--VTNDGKRGKVTIIDMVI 291 (352)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHH--HSGGGCCCEEEEEECEE
T ss_pred ehhhccCCHHHHHHHHHHHHHh--CCCCCCCcEEEEEEeec
Confidence 654310 1223788999998 876 44455665443
No 279
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.15 E-value=3e-06 Score=82.09 Aligned_cols=105 Identities=8% Similarity=0.043 Sum_probs=74.5
Q ss_pred CCEEEEEcCCchHHHHHHHHHHcCC-----------CCcEEEEEeCCchhHHHHHHHHhc-ccCCcEEEEEcchhhhhh-
Q 042616 41 AQLIVMACSSIAVSRTLALVAAARQ-----------TGGRVVCILSGVIGDIDASKKSLG-RYANCIEFVKGDAQKLLM- 107 (220)
Q Consensus 41 a~~ILEIGtg~~G~sTl~LA~A~~~-----------~~grV~tIE~d~~~~~~~Ar~~l~-g~~~~Ve~v~gda~~~L~- 107 (220)
.+.|||+||| +|..+...+.|+.. ...+|++||.+ +.+....+.... ++.++|+++.||.+++-.
T Consensus 410 ~~VVldVGaG-tGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEkn-p~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp 487 (745)
T 3ua3_A 410 TVVIYLLGGG-RGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKN-PNAIVTLKYMNVRTWKRRVTIIESDMRSLPGI 487 (745)
T ss_dssp EEEEEEESCT-TCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECC-HHHHHHHHHHHHHTTTTCSEEEESCGGGHHHH
T ss_pred CcEEEEECCC-CCHHHHHHHHHHHHhCccccccccccccEEEEEeCC-hHHHHHHHHHHhcCCCCeEEEEeCchhhcccc
Confidence 4689999997 99987654444321 12499999999 877666555554 888899999999998732
Q ss_pred ---hcCCCccEEEEcCC---CCCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 108 ---GDYRGADFVLIDCN---IDIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 108 ---~~~~~~D~VfiD~~---k~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
...+++|+|+-..- -+++...+.++.+.+. |+| ||+++=+
T Consensus 488 ~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~--Lkp-~Gi~iP~ 533 (745)
T 3ua3_A 488 AKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGF--LKP-TTISIPQ 533 (745)
T ss_dssp HHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGG--SCT-TCEEESC
T ss_pred cccCCCCcccEEEEeccccccchhccHHHHHHHHHh--CCC-CcEEECC
Confidence 11468999985432 1225667888888887 876 8876644
No 280
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.11 E-value=2.5e-06 Score=75.80 Aligned_cols=94 Identities=10% Similarity=0.021 Sum_probs=69.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccEEEEc
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFVLID 119 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~VfiD 119 (220)
+..+||||||| +|..+..|+...+ ..+++.+|. +.+++.|++. .+|+++.+|..+.+| .||+|++-
T Consensus 209 ~~~~vLDvG~G-~G~~~~~l~~~~~--~~~~~~~D~--~~~~~~a~~~-----~~v~~~~~d~~~~~~----~~D~v~~~ 274 (372)
T 1fp1_D 209 GISTLVDVGGG-SGRNLELIISKYP--LIKGINFDL--PQVIENAPPL-----SGIEHVGGDMFASVP----QGDAMILK 274 (372)
T ss_dssp TCSEEEEETCT-TSHHHHHHHHHCT--TCEEEEEEC--HHHHTTCCCC-----TTEEEEECCTTTCCC----CEEEEEEE
T ss_pred CCCEEEEeCCC-CcHHHHHHHHHCC--CCeEEEeCh--HHHHHhhhhc-----CCCEEEeCCcccCCC----CCCEEEEe
Confidence 46899999996 9999999998875 468899998 5666655542 469999999977332 39999986
Q ss_pred CCCCC-c--cHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 120 CNIDI-D--GHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 120 ~~k~~-~--~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
.--+. . ....+++.+.+. |+| ||.+++.
T Consensus 275 ~~lh~~~d~~~~~~l~~~~~~--L~p-gG~l~i~ 305 (372)
T 1fp1_D 275 AVCHNWSDEKCIEFLSNCHKA--LSP-NGKVIIV 305 (372)
T ss_dssp SSGGGSCHHHHHHHHHHHHHH--EEE-EEEEEEE
T ss_pred cccccCCHHHHHHHHHHHHHh--cCC-CCEEEEE
Confidence 54311 1 223789999998 887 6655543
No 281
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.06 E-value=8.8e-06 Score=78.15 Aligned_cols=108 Identities=13% Similarity=0.059 Sum_probs=76.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCC--------CC--cEEEEEeCCchhHHHHHHHHh--------------c-----
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQ--------TG--GRVVCILSGVIGDIDASKKSL--------------G----- 89 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~--------~~--grV~tIE~d~~~~~~~Ar~~l--------------~----- 89 (220)
.++-+|+|+|.| +|++.+.+.++..+ .. -+++++|.. |-..+..++.+ +
T Consensus 57 ~~~~~i~e~gfG-~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~-p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~ 134 (689)
T 3pvc_A 57 QQSCIFAETGFG-TGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKY-PLHVADLASAHARWPELASFAEQLRAQWPLP 134 (689)
T ss_dssp SSEEEEEEECCT-TSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESS-CCCHHHHHHHHTTCGGGHHHHHHHHHTCCCC
T ss_pred CCceEEEEecCc-hHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCC-CCCHHHHHHHHHhCcchhHHHHHHHHhCccc
Confidence 345789999975 99999988776421 12 468999996 64443333311 1
Q ss_pred --c-----cCC---cEEEEEcchhhhhhhc----CCCccEEEEcCCCCCccH------HHHHHHHHhhcCCCCCCEEEEE
Q 042616 90 --R-----YAN---CIEFVKGDAQKLLMGD----YRGADFVLIDCNIDIDGH------KNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 90 --g-----~~~---~Ve~v~gda~~~L~~~----~~~~D~VfiD~~k~~~~y------~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
| +.+ .++++.||+.+.|+++ ...+|.+|+|+-. ..+ .++|..+.++ +++ |+.+..
T Consensus 135 ~~~~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~--p~~np~~w~~~~~~~l~~~--~~~-g~~~~t 209 (689)
T 3pvc_A 135 LAGCHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFA--PAKNPDMWNEQLFNAMARM--TRP-GGTFST 209 (689)
T ss_dssp CSEEEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSC--C--CCTTCSHHHHHHHHHH--EEE-EEEEEE
T ss_pred CCCceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCC--CCCChhhhhHHHHHHHHHH--hCC-CCEEEe
Confidence 1 122 4789999999999987 3679999999976 433 8889999988 765 888887
Q ss_pred ecCC
Q 042616 150 YNAL 153 (220)
Q Consensus 150 dNv~ 153 (220)
..+.
T Consensus 210 ~~~~ 213 (689)
T 3pvc_A 210 FTAA 213 (689)
T ss_dssp SCCC
T ss_pred ccCc
Confidence 6553
No 282
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.00 E-value=3e-05 Score=67.58 Aligned_cols=88 Identities=20% Similarity=0.243 Sum_probs=68.8
Q ss_pred HHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhh---
Q 042616 29 GEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKL--- 105 (220)
Q Consensus 29 ~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~--- 105 (220)
-+.+..| ...+...+||.++| .|--|..|++. +|+|+++|.| |++++.|++ ++. +++++++++..++
T Consensus 12 ~e~le~L-~~~~gg~~VD~T~G-~GGHS~~il~~----~g~VigiD~D-p~Ai~~A~~-L~~--~rv~lv~~~f~~l~~~ 81 (285)
T 1wg8_A 12 QEALDLL-AVRPGGVYVDATLG-GAGHARGILER----GGRVIGLDQD-PEAVARAKG-LHL--PGLTVVQGNFRHLKRH 81 (285)
T ss_dssp HHHHHHH-TCCTTCEEEETTCT-TSHHHHHHHHT----TCEEEEEESC-HHHHHHHHH-TCC--TTEEEEESCGGGHHHH
T ss_pred HHHHHhh-CCCCCCEEEEeCCC-CcHHHHHHHHC----CCEEEEEeCC-HHHHHHHHh-hcc--CCEEEEECCcchHHHH
Confidence 3445444 45667899998886 77778888875 6899999999 999999999 865 5899999999876
Q ss_pred hhhc-CCCccEEEEcCCCCCccHH
Q 042616 106 LMGD-YRGADFVLIDCNIDIDGHK 128 (220)
Q Consensus 106 L~~~-~~~~D~VfiD~~k~~~~y~ 128 (220)
|... ..++|.|+.|-.. ..++
T Consensus 82 L~~~g~~~vDgIL~DLGv--SS~Q 103 (285)
T 1wg8_A 82 LAALGVERVDGILADLGV--SSFH 103 (285)
T ss_dssp HHHTTCSCEEEEEEECSC--CHHH
T ss_pred HHHcCCCCcCEEEeCCcc--cccc
Confidence 4332 2579999999887 5443
No 283
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=97.95 E-value=1.5e-05 Score=70.37 Aligned_cols=98 Identities=15% Similarity=0.114 Sum_probs=70.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccEEEEc
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFVLID 119 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~VfiD 119 (220)
+..+||||||| +|..+..|++..+ +.+++.+|. +..++.|++ + .+|+++.+|..+-+ ..||+|++-
T Consensus 193 ~~~~vlDvG~G-~G~~~~~l~~~~p--~~~~~~~D~--~~~~~~a~~----~-~~v~~~~~d~~~~~----~~~D~v~~~ 258 (358)
T 1zg3_A 193 GLESLVDVGGG-TGGVTKLIHEIFP--HLKCTVFDQ--PQVVGNLTG----N-ENLNFVGGDMFKSI----PSADAVLLK 258 (358)
T ss_dssp TCSEEEEETCT-TSHHHHHHHHHCT--TSEEEEEEC--HHHHSSCCC----C-SSEEEEECCTTTCC----CCCSEEEEE
T ss_pred CCCEEEEECCC-cCHHHHHHHHHCC--CCeEEEecc--HHHHhhccc----C-CCcEEEeCccCCCC----CCceEEEEc
Confidence 56899999986 9999999998875 478999997 466655543 2 45999999987732 359999986
Q ss_pred CCCCC-cc--HHHHHHHHHhhcCCCC---CCEEEEEecCC
Q 042616 120 CNIDI-DG--HKNVFRAAKESVMHGS---GAGVIVGYNAL 153 (220)
Q Consensus 120 ~~k~~-~~--y~~~l~~l~~~~~L~~---~Ggviv~dNv~ 153 (220)
.--+. .+ ...+++.+.+. |+| .|-+++.+.+.
T Consensus 259 ~vlh~~~d~~~~~~l~~~~~~--L~p~~~gG~l~i~e~~~ 296 (358)
T 1zg3_A 259 WVLHDWNDEQSLKILKNSKEA--ISHKGKDGKVIIIDISI 296 (358)
T ss_dssp SCGGGSCHHHHHHHHHHHHHH--TGGGGGGCEEEEEECEE
T ss_pred ccccCCCHHHHHHHHHHHHHh--CCCCCCCcEEEEEEecc
Confidence 54310 12 34888999998 876 44456666443
No 284
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.94 E-value=9.6e-06 Score=76.49 Aligned_cols=100 Identities=9% Similarity=-0.096 Sum_probs=74.9
Q ss_pred CCCCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCC-------------CcEEEEEeCCchhHHHHHHH
Q 042616 20 GKRGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQT-------------GGRVVCILSGVIGDIDASKK 86 (220)
Q Consensus 20 ~~~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~-------------~grV~tIE~d~~~~~~~Ar~ 86 (220)
++...++.+.++|..++...+. +|+|.+|| +|.+.+.++..+... ..+++++|.+ +..++.|+.
T Consensus 225 G~fyTP~~Vv~lmv~ll~p~~~-~VlDPaCG-SG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid-~~~~~lA~~ 301 (544)
T 3khk_A 225 GQYYTPKSIVTLIVEMLEPYKG-RVYDPAMG-SGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESN-PTTWKLAAM 301 (544)
T ss_dssp TTTCCCHHHHHHHHHHHCCCSE-EEEESSCT-TCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCC-HHHHHHHHH
T ss_pred CeEeCCHHHHHHHHHHHhcCCC-eEeCcccC-cCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCC-HHHHHHHHH
Confidence 5567888889999999876554 89999997 888777665433210 2589999999 999999999
Q ss_pred Hhc--ccCCcEEEEEcchhhhhhhcCCCccEEEEcCCC
Q 042616 87 SLG--RYANCIEFVKGDAQKLLMGDYRGADFVLIDCNI 122 (220)
Q Consensus 87 ~l~--g~~~~Ve~v~gda~~~L~~~~~~~D~VfiD~~k 122 (220)
|+. ++..++.+++||....-......||+|+.+++-
T Consensus 302 Nl~l~gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf 339 (544)
T 3khk_A 302 NMVIRGIDFNFGKKNADSFLDDQHPDLRADFVMTNPPF 339 (544)
T ss_dssp HHHHTTCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCS
T ss_pred HHHHhCCCcccceeccchhcCcccccccccEEEECCCc
Confidence 886 765566668898765322213689999987765
No 285
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.84 E-value=1.7e-05 Score=62.47 Aligned_cols=88 Identities=11% Similarity=0.074 Sum_probs=65.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhh--cCCCccEE
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMG--DYRGADFV 116 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~--~~~~~D~V 116 (220)
.+..+||++||| . ++||.+ +++++.|++.+. .+++++++|+.+.... ..++||+|
T Consensus 11 ~~g~~vL~~~~g-~------------------v~vD~s-~~ml~~a~~~~~---~~~~~~~~d~~~~~~~~~~~~~fD~V 67 (176)
T 2ld4_A 11 SAGQFVAVVWDK-S------------------SPVEAL-KGLVDKLQALTG---NEGRVSVENIKQLLQSAHKESSFDII 67 (176)
T ss_dssp CTTSEEEEEECT-T------------------SCHHHH-HHHHHHHHHHTT---TTSEEEEEEGGGGGGGCCCSSCEEEE
T ss_pred CCCCEEEEecCC-c------------------eeeeCC-HHHHHHHHHhcc---cCcEEEEechhcCccccCCCCCEeEE
Confidence 457899999986 2 238999 999999998864 2489999999875321 24689999
Q ss_pred EEcCCC-CC-ccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 117 LIDCNI-DI-DGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 117 fiD~~k-~~-~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
+.-... .- .+....++.+.+. |+| ||.+++.+.
T Consensus 68 ~~~~~l~~~~~~~~~~l~~~~r~--Lkp-gG~l~~~~~ 102 (176)
T 2ld4_A 68 LSGLVPGSTTLHSAEILAEIARI--LRP-GGCLFLKEP 102 (176)
T ss_dssp EECCSTTCCCCCCHHHHHHHHHH--EEE-EEEEEEEEE
T ss_pred EECChhhhcccCHHHHHHHHHHH--CCC-CEEEEEEcc
Confidence 974322 11 3558899999999 887 887777543
No 286
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.78 E-value=7.7e-05 Score=70.31 Aligned_cols=132 Identities=12% Similarity=-0.007 Sum_probs=96.2
Q ss_pred CCCCCChhHHHHHHHHHh----hCCCCEEEEEcCCchHHHHHHHHHHcCCC-CcEEEEEeCCchhHHHHHHHHhc--ccC
Q 042616 20 GKRGKEPDVGEFISALAA----GNNAQLIVMACSSIAVSRTLALVAAARQT-GGRVVCILSGVIGDIDASKKSLG--RYA 92 (220)
Q Consensus 20 ~~~~~~p~~~~~L~~La~----~~~a~~ILEIGtg~~G~sTl~LA~A~~~~-~grV~tIE~d~~~~~~~Ar~~l~--g~~ 92 (220)
++...++.+.++|..++. ..+..+|+|.+|| +|.+.+.++..+... ...++++|.+ +..++.|+.|+. |+.
T Consensus 197 G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCG-SG~fLi~a~~~l~~~~~~~i~G~Eid-~~~~~lA~~Nl~l~gi~ 274 (542)
T 3lkd_A 197 GEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMG-SGSLLLNAKRYSRQPQTVVYFGQELN-TSTYNLARMNMILHGVP 274 (542)
T ss_dssp SSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCT-TSTTGGGHHHHCSCTTTCEEEEEESC-HHHHHHHHHHHHHTTCC
T ss_pred CeecccHHHHHHHHHHHhcccCCCCCCEEeecccc-hhHHHHHHHHHHHhccCceEEEEECc-HHHHHHHHHHHHHcCCC
Confidence 566788889999999998 4566799999997 898888887776432 4689999999 999999999885 664
Q ss_pred -CcEEEEEcchhhhh-hhc-CCCccEEEEcCCCCC-----------cc---H----------HHHHHHHHhhcCCC-CCC
Q 042616 93 -NCIEFVKGDAQKLL-MGD-YRGADFVLIDCNIDI-----------DG---H----------KNVFRAAKESVMHG-SGA 144 (220)
Q Consensus 93 -~~Ve~v~gda~~~L-~~~-~~~~D~VfiD~~k~~-----------~~---y----------~~~l~~l~~~~~L~-~~G 144 (220)
+++.++++|....- |.. ...||+|+.+++-.. .. | ..++..+..+ |+ + |
T Consensus 275 ~~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~--Lk~~-g 351 (542)
T 3lkd_A 275 IENQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYH--LKQD-N 351 (542)
T ss_dssp GGGEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHT--BCTT-T
T ss_pred cCccceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHH--hCCC-c
Confidence 57899999987641 221 467999997755310 00 1 2367778887 87 6 5
Q ss_pred EE---EEEecCCCCC
Q 042616 145 GV---IVGYNALPKG 156 (220)
Q Consensus 145 gv---iv~dNv~~~g 156 (220)
|. |+-+++++.+
T Consensus 352 Gr~a~VlP~g~Lf~~ 366 (542)
T 3lkd_A 352 GVMAIVLPHGVLFRG 366 (542)
T ss_dssp CEEEEEEETHHHHCC
T ss_pred eeEEEEecchHhhCC
Confidence 44 4555566654
No 287
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.71 E-value=9.8e-05 Score=58.58 Aligned_cols=88 Identities=15% Similarity=0.079 Sum_probs=63.4
Q ss_pred HhhCC-CCEEEEEcCCchH-HHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCc
Q 042616 36 AAGNN-AQLIVMACSSIAV-SRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGA 113 (220)
Q Consensus 36 a~~~~-a~~ILEIGtg~~G-~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~ 113 (220)
++..+ +.+||||||| .| ..+++|++-. +-.|+++|.+ |..++ ++.+|..+-...+..+|
T Consensus 30 ~~~~~~~~rVlEVG~G-~g~~vA~~La~~~---g~~V~atDIn-p~Av~--------------~v~dDiF~P~~~~Y~~~ 90 (153)
T 2k4m_A 30 IRCSGPGTRVVEVGAG-RFLYVSDYIRKHS---KVDLVLTDIK-PSHGG--------------IVRDDITSPRMEIYRGA 90 (153)
T ss_dssp HHHSCSSSEEEEETCT-TCCHHHHHHHHHS---CCEEEEECSS-CSSTT--------------EECCCSSSCCHHHHTTE
T ss_pred HhcCCCCCcEEEEccC-CChHHHHHHHHhC---CCeEEEEECC-ccccc--------------eEEccCCCCcccccCCc
Confidence 33433 5799999997 89 5899998631 6689999999 76654 77777765333334689
Q ss_pred cEE-EEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 114 DFV-LIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 114 D~V-fiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
|+| -+-++. +.....++.+++. |+-+++.
T Consensus 91 DLIYsirPP~--El~~~i~~lA~~v------~adliI~ 120 (153)
T 2k4m_A 91 ALIYSIRPPA--EIHSSLMRVADAV------GARLIIK 120 (153)
T ss_dssp EEEEEESCCT--TTHHHHHHHHHHH------TCEEEEE
T ss_pred CEEEEcCCCH--HHHHHHHHHHHHc------CCCEEEE
Confidence 999 678877 7777777777775 5555554
No 288
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.70 E-value=0.00025 Score=69.84 Aligned_cols=101 Identities=11% Similarity=0.089 Sum_probs=71.0
Q ss_pred CCCCCChhHHHHHHHHHhh------CCCCEEEEEcCCchHHHHHHHHHHcCCC-CcEEEEEeCCchhHHHHH--HHHhc-
Q 042616 20 GKRGKEPDVGEFISALAAG------NNAQLIVMACSSIAVSRTLALVAAARQT-GGRVVCILSGVIGDIDAS--KKSLG- 89 (220)
Q Consensus 20 ~~~~~~p~~~~~L~~La~~------~~a~~ILEIGtg~~G~sTl~LA~A~~~~-~grV~tIE~d~~~~~~~A--r~~l~- 89 (220)
++...++..++++..+|.. .+..+|||.||| +|...+.++..++.. ..+++++|.| +..++.| +.++.
T Consensus 295 GqFYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCG-SG~FLIaaA~~l~ei~~~~IyGvEID-p~Al~LAK~RlNL~l 372 (878)
T 3s1s_A 295 GVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAG-SGNLLATVSAGFNNVMPRQIWANDIE-TLFLELLSIRLGLLF 372 (878)
T ss_dssp BSSSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCT-TSHHHHHHHHTSTTCCGGGEEEECSC-GGGHHHHHHHHHTTS
T ss_pred ceEcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCC-ccHHHHHHHHHhcccCCCeEEEEECC-HHHHHHHHHHHHHHH
Confidence 4567888889999888432 136799999997 999988888766421 3679999999 9999999 66653
Q ss_pred -ccC---CcEEEEEcchhhhhhhcCCCccEEEEcCCC
Q 042616 90 -RYA---NCIEFVKGDAQKLLMGDYRGADFVLIDCNI 122 (220)
Q Consensus 90 -g~~---~~Ve~v~gda~~~L~~~~~~~D~VfiD~~k 122 (220)
.+. +...+..+|..+.-+.....||+|+.+++-
T Consensus 373 N~LlhGi~~~~I~~dD~L~~~~~~~~kFDVVIgNPPY 409 (878)
T 3s1s_A 373 PQLVSSNNAPTITGEDVCSLNPEDFANVSVVVMNPPY 409 (878)
T ss_dssp TTTCBTTBCCEEECCCGGGCCGGGGTTEEEEEECCBC
T ss_pred hhhhcCCCcceEEecchhcccccccCCCCEEEECCCc
Confidence 121 223555666655221224689999988765
No 289
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.51 E-value=0.00019 Score=64.08 Aligned_cols=87 Identities=14% Similarity=0.157 Sum_probs=65.2
Q ss_pred HHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhh--
Q 042616 29 GEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLL-- 106 (220)
Q Consensus 29 ~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L-- 106 (220)
.|.+..| ...+...+||..+| .|--|..|++.+.+ .|+|+++|.| +++++.|+ .+. .+++++++++..++.
T Consensus 47 ~Evl~~L-~i~pggiyVD~TlG-~GGHS~~iL~~lg~-~GrVig~D~D-p~Al~~A~-rL~--~~Rv~lv~~nF~~l~~~ 119 (347)
T 3tka_A 47 DEAVNGL-NIRPDGIYIDGTFG-RGGHSRLILSQLGE-EGRLLAIDRD-PQAIAVAK-TID--DPRFSIIHGPFSALGEY 119 (347)
T ss_dssp HHHHHHT-CCCTTCEEEESCCT-TSHHHHHHHTTCCT-TCEEEEEESC-HHHHHHHT-TCC--CTTEEEEESCGGGHHHH
T ss_pred HHHHHhh-CCCCCCEEEEeCcC-CCHHHHHHHHhCCC-CCEEEEEECC-HHHHHHHH-hhc--CCcEEEEeCCHHHHHHH
Confidence 3444444 34556789997655 77788888888766 7999999999 99999985 442 378999999987754
Q ss_pred -hhcC--CCccEEEEcCCC
Q 042616 107 -MGDY--RGADFVLIDCNI 122 (220)
Q Consensus 107 -~~~~--~~~D~VfiD~~k 122 (220)
+... +++|.|++|-..
T Consensus 120 L~~~g~~~~vDgILfDLGV 138 (347)
T 3tka_A 120 VAERDLIGKIDGILLDLGV 138 (347)
T ss_dssp HHHTTCTTCEEEEEEECSC
T ss_pred HHhcCCCCcccEEEECCcc
Confidence 3321 369999999887
No 290
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.48 E-value=0.00027 Score=63.26 Aligned_cols=80 Identities=8% Similarity=-0.059 Sum_probs=63.1
Q ss_pred CCC-CCChhHHHHHHHHHhhCC------CCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccC
Q 042616 20 GKR-GKEPDVGEFISALAAGNN------AQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYA 92 (220)
Q Consensus 20 ~~~-~~~p~~~~~L~~La~~~~------a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~ 92 (220)
||. .+.+..++-|...+...+ ...|||||.| .|..|..|+.... ..+|++||+| +..+...++.+ . .
T Consensus 31 GQnFL~d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG-~G~LT~~Ll~~~~--~~~vvavE~D-~~l~~~L~~~~-~-~ 104 (353)
T 1i4w_A 31 GFKYLWNPTVYNKIFDKLDLTKTYKHPEELKVLDLYPG-VGIQSAIFYNKYC--PRQYSLLEKR-SSLYKFLNAKF-E-G 104 (353)
T ss_dssp GCCCBCCHHHHHHHHHHHCGGGTCCCTTTCEEEEESCT-TCHHHHHHHHHHC--CSEEEEECCC-HHHHHHHHHHT-T-T
T ss_pred CcCccCCHHHHHHHHHhccCCcccCcCCCCEEEEECCC-CCHHHHHHHhhCC--CCEEEEEecC-HHHHHHHHHhc-c-C
Confidence 443 577888877777776553 4889999997 9999999998543 3699999999 88888877766 3 3
Q ss_pred CcEEEEEcchhhh
Q 042616 93 NCIEFVKGDAQKL 105 (220)
Q Consensus 93 ~~Ve~v~gda~~~ 105 (220)
++++++++|+.++
T Consensus 105 ~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 105 SPLQILKRDPYDW 117 (353)
T ss_dssp SSCEEECSCTTCH
T ss_pred CCEEEEECCccch
Confidence 6899999999654
No 291
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.47 E-value=0.0014 Score=57.54 Aligned_cols=133 Identities=18% Similarity=0.130 Sum_probs=81.3
Q ss_pred hCCCCEEEEEcCCchHHHHHHHHH---HcCCCCcE--EEEEeCCchh---------HHHHHHHHhc---cc-CCc--EEE
Q 042616 38 GNNAQLIVMACSSIAVSRTLALVA---AARQTGGR--VVCILSGVIG---------DIDASKKSLG---RY-ANC--IEF 97 (220)
Q Consensus 38 ~~~a~~ILEIGtg~~G~sTl~LA~---A~~~~~gr--V~tIE~d~~~---------~~~~Ar~~l~---g~-~~~--Ve~ 97 (220)
..+.-+|+|+|-| +|+.++.... ...+ ..+ .+++|.+ +- ..+..+..+. .. ..+ .++
T Consensus 94 ~~~~~~IlE~GFG-TGLNfl~t~~~~~~~~~-~~~L~~iS~Ek~-pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l 170 (308)
T 3vyw_A 94 ERKVIRILDVGFG-LGYNLAVALKHLWEVNP-KLRVEIISFEKE-LLKEFPILPEPYREIHEFLLERVPEYEGERLSLKV 170 (308)
T ss_dssp HCSEEEEEEECCT-TSHHHHHHHHHHHHHCT-TCEEEEEEEESS-CCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEE
T ss_pred CCCCcEEEEeCCC-ccHHHHHHHHHHHHhCC-CcceEEEeecHH-HHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEE
Confidence 3444579999964 9998764332 2232 455 4788864 32 1222333322 11 233 578
Q ss_pred EEcchhhhhhhcCC-CccEEEEcCCCCCcc---H-HHHHHHHHhhcCCCCCCEEEEEecCCCCCCcc------ceEEEee
Q 042616 98 VKGDAQKLLMGDYR-GADFVLIDCNIDIDG---H-KNVFRAAKESVMHGSGAGVIVGYNALPKGSWR------GYKTHFL 166 (220)
Q Consensus 98 v~gda~~~L~~~~~-~~D~VfiD~~k~~~~---y-~~~l~~l~~~~~L~~~Ggviv~dNv~~~g~~~------~~~s~~l 166 (220)
..||+.+.++++.. .+|.+|+|+--+..+ + .++|+.+.++ ++| ||+++.+-+ .|..+ +|.-.-+
T Consensus 171 ~~GDa~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~--~~p-gg~laTYta--ag~VRR~L~~aGF~V~k~ 245 (308)
T 3vyw_A 171 LLGDARKRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKER--IDE-KGYWVSYSS--SLSVRKSLLTLGFKVGSS 245 (308)
T ss_dssp EESCHHHHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTT--EEE-EEEEEESCC--CHHHHHHHHHTTCEEEEE
T ss_pred EechHHHHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHH--hCC-CcEEEEEeC--cHHHHHHHHHCCCEEEec
Confidence 89999999998754 799999998332222 2 7899999998 775 999998633 33222 4554434
Q ss_pred e-cC--CcEEEEEEe
Q 042616 167 P-IG--EGLLVTRIG 178 (220)
Q Consensus 167 P-ig--~Gl~v~~~~ 178 (220)
| .| ..|+++.+.
T Consensus 246 ~G~g~KReml~A~~~ 260 (308)
T 3vyw_A 246 REIGRKRKGTVASLK 260 (308)
T ss_dssp ECC---CEEEEEESS
T ss_pred CCCCCCCceeEEecC
Confidence 3 22 257777654
No 292
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=97.24 E-value=0.001 Score=57.93 Aligned_cols=102 Identities=16% Similarity=0.105 Sum_probs=68.7
Q ss_pred hhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccEE
Q 042616 37 AGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFV 116 (220)
Q Consensus 37 ~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~V 116 (220)
...+.++||-+|+|++|..++.+|++. +.+|++++.+ +++.+.+++. |...-+.....+..+.+....+.+|.+
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~---Ga~Vi~~~~~-~~~~~~~~~l--Ga~~~i~~~~~~~~~~~~~~~g~~d~v 236 (340)
T 3s2e_A 163 DTRPGQWVVISGIGGLGHVAVQYARAM---GLRVAAVDID-DAKLNLARRL--GAEVAVNARDTDPAAWLQKEIGGAHGV 236 (340)
T ss_dssp TCCTTSEEEEECCSTTHHHHHHHHHHT---TCEEEEEESC-HHHHHHHHHT--TCSEEEETTTSCHHHHHHHHHSSEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC---CCeEEEEeCC-HHHHHHHHHc--CCCEEEeCCCcCHHHHHHHhCCCCCEE
Confidence 345678999999988999999999875 6799999999 9999888764 221111111123333332223479999
Q ss_pred EEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 117 LIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 117 fiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
|..... ...++.+.+. |++ ||.++.-..
T Consensus 237 id~~g~-----~~~~~~~~~~--l~~-~G~iv~~G~ 264 (340)
T 3s2e_A 237 LVTAVS-----PKAFSQAIGM--VRR-GGTIALNGL 264 (340)
T ss_dssp EESSCC-----HHHHHHHHHH--EEE-EEEEEECSC
T ss_pred EEeCCC-----HHHHHHHHHH--hcc-CCEEEEeCC
Confidence 766544 3456777777 765 888776543
No 293
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.16 E-value=0.0011 Score=59.76 Aligned_cols=72 Identities=14% Similarity=0.052 Sum_probs=55.0
Q ss_pred hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccEEE
Q 042616 38 GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFVL 117 (220)
Q Consensus 38 ~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~Vf 117 (220)
..+.+++||+|++ .|-+|-.|+.- +++|++||+. +-. ..... ..+|+++.+|+.+..+. ..++|.|+
T Consensus 209 l~~G~~vlDLGAa-PGGWT~~l~~r----g~~V~aVD~~-~l~-~~l~~-----~~~V~~~~~d~~~~~~~-~~~~D~vv 275 (375)
T 4auk_A 209 LANGMWAVDLGAC-PGGWTYQLVKR----NMWVYSVDNG-PMA-QSLMD-----TGQVTWLREDGFKFRPT-RSNISWMV 275 (375)
T ss_dssp SCTTCEEEEETCT-TCHHHHHHHHT----TCEEEEECSS-CCC-HHHHT-----TTCEEEECSCTTTCCCC-SSCEEEEE
T ss_pred CCCCCEEEEeCcC-CCHHHHHHHHC----CCEEEEEEhh-hcC-hhhcc-----CCCeEEEeCccccccCC-CCCcCEEE
Confidence 3567899999984 99999988763 8999999987 421 11111 25799999999887654 46899999
Q ss_pred EcCCC
Q 042616 118 IDCNI 122 (220)
Q Consensus 118 iD~~k 122 (220)
.|-.-
T Consensus 276 sDm~~ 280 (375)
T 4auk_A 276 CDMVE 280 (375)
T ss_dssp ECCSS
T ss_pred EcCCC
Confidence 99876
No 294
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=97.06 E-value=0.0052 Score=53.32 Aligned_cols=107 Identities=13% Similarity=0.065 Sum_probs=70.2
Q ss_pred HHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc--CCC
Q 042616 35 LAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD--YRG 112 (220)
Q Consensus 35 La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~--~~~ 112 (220)
.+...+.++||-+|+|+.|..++.+|+++. ...+++++.+ +++.+.|++. |....+.....+..+....+ ...
T Consensus 155 ~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G--~~~vi~~~~~-~~k~~~a~~l--Ga~~~i~~~~~~~~~~~~~~~~~~g 229 (346)
T 4a2c_A 155 LAQGCENKNVIIIGAGTIGLLAIQCAVALG--AKSVTAIDIS-SEKLALAKSF--GAMQTFNSSEMSAPQMQSVLRELRF 229 (346)
T ss_dssp HTTCCTTSEEEEECCSHHHHHHHHHHHHTT--CSEEEEEESC-HHHHHHHHHT--TCSEEEETTTSCHHHHHHHHGGGCS
T ss_pred HhccCCCCEEEEECCCCcchHHHHHHHHcC--CcEEEEEech-HHHHHHHHHc--CCeEEEeCCCCCHHHHHHhhcccCC
Confidence 344566799999999889999999998863 3567999999 9999988875 22111222223444433322 345
Q ss_pred ccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCCC
Q 042616 113 ADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNALP 154 (220)
Q Consensus 113 ~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~~ 154 (220)
+|+||-.... ...++.+.+. +++ ||.++......
T Consensus 230 ~d~v~d~~G~-----~~~~~~~~~~--l~~-~G~~v~~g~~~ 263 (346)
T 4a2c_A 230 NQLILETAGV-----PQTVELAVEI--AGP-HAQLALVGTLH 263 (346)
T ss_dssp SEEEEECSCS-----HHHHHHHHHH--CCT-TCEEEECCCCS
T ss_pred cccccccccc-----cchhhhhhhe--ecC-CeEEEEEeccC
Confidence 7776644433 4567777777 765 78777765554
No 295
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=97.06 E-value=0.017 Score=50.59 Aligned_cols=99 Identities=13% Similarity=0.066 Sum_probs=65.7
Q ss_pred hhCCCCEEEEEcCCchHHHHHHHHHHcCCCCc-EEEEEeCCchhHHHHHHHHhcccCCcEEEEEcc---hhh---hhhhc
Q 042616 37 AGNNAQLIVMACSSIAVSRTLALVAAARQTGG-RVVCILSGVIGDIDASKKSLGRYANCIEFVKGD---AQK---LLMGD 109 (220)
Q Consensus 37 ~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~g-rV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gd---a~~---~L~~~ 109 (220)
...+.++||.+|+|++|..++.||+++ +. +|++++.+ +++.+.+++. |. + .++..+ ..+ .+...
T Consensus 168 ~~~~g~~VlV~GaG~vG~~aiqlak~~---Ga~~Vi~~~~~-~~~~~~a~~l--Ga-~--~vi~~~~~~~~~~~~~i~~~ 238 (356)
T 1pl8_A 168 GVTLGHKVLVCGAGPIGMVTLLVAKAM---GAAQVVVTDLS-ATRLSKAKEI--GA-D--LVLQISKESPQEIARKVEGQ 238 (356)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHT---TCSEEEEEESC-HHHHHHHHHT--TC-S--EEEECSSCCHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc---CCCEEEEECCC-HHHHHHHHHh--CC-C--EEEcCcccccchHHHHHHHH
Confidence 455678999999988999999999875 55 99999999 8888888753 22 2 222222 122 22121
Q ss_pred -CCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 110 -YRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 110 -~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
...+|+||--... ...++.+.+. |++ ||.++.-..
T Consensus 239 ~~~g~D~vid~~g~-----~~~~~~~~~~--l~~-~G~iv~~G~ 274 (356)
T 1pl8_A 239 LGCKPEVTIECTGA-----EASIQAGIYA--TRS-GGTLVLVGL 274 (356)
T ss_dssp HTSCCSEEEECSCC-----HHHHHHHHHH--SCT-TCEEEECSC
T ss_pred hCCCCCEEEECCCC-----hHHHHHHHHH--hcC-CCEEEEEec
Confidence 2579998744333 3456777777 766 777776543
No 296
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=97.01 E-value=0.0081 Score=52.13 Aligned_cols=103 Identities=12% Similarity=0.045 Sum_probs=69.0
Q ss_pred hhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcC--CCcc
Q 042616 37 AGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDY--RGAD 114 (220)
Q Consensus 37 ~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~--~~~D 114 (220)
...+.++||-+|+|+.|..++.+++.+. +.+|++++.+ +++.+.+++.-. ..-+.....|..+.+..+. ..+|
T Consensus 160 ~~~~g~~VlV~GaG~~g~~a~~~a~~~~--g~~Vi~~~~~-~~r~~~~~~~Ga--~~~i~~~~~~~~~~v~~~t~g~g~d 234 (348)
T 4eez_A 160 GVKPGDWQVIFGAGGLGNLAIQYAKNVF--GAKVIAVDIN-QDKLNLAKKIGA--DVTINSGDVNPVDEIKKITGGLGVQ 234 (348)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTS--CCEEEEEESC-HHHHHHHHHTTC--SEEEEC-CCCHHHHHHHHTTSSCEE
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHhC--CCEEEEEECc-HHHhhhhhhcCC--eEEEeCCCCCHHHHhhhhcCCCCce
Confidence 3456789999999878888777776543 6899999999 998888877532 1223334455555444432 4678
Q ss_pred EEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 115 FVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 115 ~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
.++.+... ...++..... |++ ||.++.-..
T Consensus 235 ~~~~~~~~-----~~~~~~~~~~--l~~-~G~~v~~g~ 264 (348)
T 4eez_A 235 SAIVCAVA-----RIAFEQAVAS--LKP-MGKMVAVAV 264 (348)
T ss_dssp EEEECCSC-----HHHHHHHHHT--EEE-EEEEEECCC
T ss_pred EEEEeccC-----cchhheehee--ecC-CceEEEEec
Confidence 88877665 3456677776 765 777776544
No 297
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.98 E-value=0.0024 Score=55.05 Aligned_cols=45 Identities=9% Similarity=0.028 Sum_probs=38.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG 89 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~ 89 (220)
.+...|||++|| +|.+++.++. .+.++++||.+ ++.++.|+++++
T Consensus 234 ~~~~~vlD~f~G-sGt~~~~a~~----~g~~~~g~e~~-~~~~~~a~~r~~ 278 (297)
T 2zig_A 234 FVGDVVLDPFAG-TGTTLIAAAR----WGRRALGVELV-PRYAQLAKERFA 278 (297)
T ss_dssp CTTCEEEETTCT-TTHHHHHHHH----TTCEEEEEESC-HHHHHHHHHHHH
T ss_pred CCCCEEEECCCC-CCHHHHHHHH----cCCeEEEEeCC-HHHHHHHHHHHH
Confidence 567899999997 8988876554 27899999999 999999999997
No 298
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.96 E-value=0.0022 Score=56.62 Aligned_cols=102 Identities=14% Similarity=0.108 Sum_probs=67.0
Q ss_pred hCCCCEEEEEcCCchHHHHHHHHHHcCCCCc-EEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc-CCCccE
Q 042616 38 GNNAQLIVMACSSIAVSRTLALVAAARQTGG-RVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD-YRGADF 115 (220)
Q Consensus 38 ~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~g-rV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~-~~~~D~ 115 (220)
..+.++||.+|+|++|..++.+|+++ +. +|++++.+ +++.+.+++. |....+.....+..+.+..+ .+.+|+
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~---Ga~~Vi~~~~~-~~~~~~a~~l--Ga~~vi~~~~~~~~~~~~~~~~gg~D~ 261 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVC---GASIIIAVDIV-ESRLELAKQL--GATHVINSKTQDPVAAIKEITDGGVNF 261 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHH---TCSEEEEEESC-HHHHHHHHHH--TCSEEEETTTSCHHHHHHHHTTSCEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc---CCCeEEEECCC-HHHHHHHHHc--CCCEEecCCccCHHHHHHHhcCCCCcE
Confidence 44568999999988899999999876 44 79999999 9999988764 22111111112333333332 237998
Q ss_pred EEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 116 VLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 116 VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
|| |+.- ....++.+.+. |++ ||.++.-...
T Consensus 262 vi-d~~g----~~~~~~~~~~~--l~~-~G~iv~~G~~ 291 (371)
T 1f8f_A 262 AL-ESTG----SPEILKQGVDA--LGI-LGKIAVVGAP 291 (371)
T ss_dssp EE-ECSC----CHHHHHHHHHT--EEE-EEEEEECCCC
T ss_pred EE-ECCC----CHHHHHHHHHH--Hhc-CCEEEEeCCC
Confidence 87 4433 23557777777 765 8887776544
No 299
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=96.95 E-value=0.0044 Score=59.10 Aligned_cols=108 Identities=14% Similarity=0.071 Sum_probs=73.1
Q ss_pred CCEEEEEcCCchHHHHHHHHHHcCC--------CC--cEEEEEeC---CchhHHHHHHH-----------Hhc-------
Q 042616 41 AQLIVMACSSIAVSRTLALVAAARQ--------TG--GRVVCILS---GVIGDIDASKK-----------SLG------- 89 (220)
Q Consensus 41 a~~ILEIGtg~~G~sTl~LA~A~~~--------~~--grV~tIE~---d~~~~~~~Ar~-----------~l~------- 89 (220)
.-+|+|+|- |+|+..+....+..+ .. -+++++|. + ++.++.+-. .++
T Consensus 67 ~~~i~e~gf-G~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~-~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~ 144 (676)
T 3ps9_A 67 LFVVAESGF-GTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLT-RADLALAHQHWPELAPWAEQLQAQWPMPLP 144 (676)
T ss_dssp EEEEEEECC-TTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCC-HHHHHHHHTTCGGGHHHHHHHHHHCCCCCS
T ss_pred ceEEEEeCC-chHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCC-HHHHHHHHHhChhhHHHHHHHHHhCcccCC
Confidence 358899996 499999887666421 12 34799999 6 555542222 211
Q ss_pred c-----cC---CcEEEEEcchhhhhhhcC----CCccEEEEcCCCCC---ccH-HHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 90 R-----YA---NCIEFVKGDAQKLLMGDY----RGADFVLIDCNIDI---DGH-KNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 90 g-----~~---~~Ve~v~gda~~~L~~~~----~~~D~VfiD~~k~~---~~y-~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
+ +. -.+++..||+.+.|+++. ..||.+|+|+-... +.+ .++|..+.+. +++ ||.+....+.
T Consensus 145 ~~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~--~~~-g~~~~t~~~~ 221 (676)
T 3ps9_A 145 GCHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARL--ARP-GGTLATFTSA 221 (676)
T ss_dssp EEEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHH--EEE-EEEEEESCCC
T ss_pred CceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHH--hCC-CCEEEeccCc
Confidence 1 11 236789999999999873 67999999986411 222 7788999988 765 9998887553
No 300
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.92 E-value=0.0037 Score=55.36 Aligned_cols=106 Identities=16% Similarity=0.217 Sum_probs=71.1
Q ss_pred HHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCc-EEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhh---c-
Q 042616 35 LAAGNNAQLIVMACSSIAVSRTLALVAAARQTGG-RVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMG---D- 109 (220)
Q Consensus 35 La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~g-rV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~---~- 109 (220)
.+...+.++||-+|+|++|..++.+|+++ |. +|++++.+ +++.+.+++. |...-+.....|..+.+.. +
T Consensus 177 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~---Ga~~Vi~~~~~-~~~~~~a~~l--Ga~~vi~~~~~~~~~~i~~~~~~~ 250 (370)
T 4ej6_A 177 LSGIKAGSTVAILGGGVIGLLTVQLARLA---GATTVILSTRQ-ATKRRLAEEV--GATATVDPSAGDVVEAIAGPVGLV 250 (370)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHT---TCSEEEEECSC-HHHHHHHHHH--TCSEEECTTSSCHHHHHHSTTSSS
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHc---CCCEEEEECCC-HHHHHHHHHc--CCCEEECCCCcCHHHHHHhhhhcc
Confidence 34556789999999998999999999875 44 99999999 9999888874 2211121122344444433 2
Q ss_pred CCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCCC
Q 042616 110 YRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNALP 154 (220)
Q Consensus 110 ~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~~ 154 (220)
.+.+|+|| |+.- ....++.+.+. |++ ||.++.-....
T Consensus 251 ~gg~Dvvi-d~~G----~~~~~~~~~~~--l~~-~G~vv~~G~~~ 287 (370)
T 4ej6_A 251 PGGVDVVI-ECAG----VAETVKQSTRL--AKA-GGTVVILGVLP 287 (370)
T ss_dssp TTCEEEEE-ECSC----CHHHHHHHHHH--EEE-EEEEEECSCCC
T ss_pred CCCCCEEE-ECCC----CHHHHHHHHHH--hcc-CCEEEEEeccC
Confidence 24799987 4432 23557777777 765 88887765543
No 301
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.81 E-value=0.0026 Score=50.75 Aligned_cols=100 Identities=8% Similarity=0.041 Sum_probs=61.8
Q ss_pred hCCCCEEEEEc-CCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc--CCCcc
Q 042616 38 GNNAQLIVMAC-SSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD--YRGAD 114 (220)
Q Consensus 38 ~~~a~~ILEIG-tg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~--~~~~D 114 (220)
..+.++||.+| +|++|..++.++.+. +.+|++++.+ ++..+.+++. +....+.....+..+.+... ...+|
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~---G~~V~~~~~~-~~~~~~~~~~--g~~~~~d~~~~~~~~~~~~~~~~~~~D 109 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMI---GARIYTTAGS-DAKREMLSRL--GVEYVGDSRSVDFADEILELTDGYGVD 109 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHH---TCEEEEEESS-HHHHHHHHTT--CCSEEEETTCSTHHHHHHHHTTTCCEE
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHc---CCEEEEEeCC-HHHHHHHHHc--CCCEEeeCCcHHHHHHHHHHhCCCCCe
Confidence 34568999999 577888888777654 6799999999 8887776542 32111111112332323222 24699
Q ss_pred EEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 115 FVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 115 ~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
.+|--. - . ..++.+.+. +++ ||.+|.-..
T Consensus 110 ~vi~~~-g--~---~~~~~~~~~--l~~-~G~~v~~g~ 138 (198)
T 1pqw_A 110 VVLNSL-A--G---EAIQRGVQI--LAP-GGRFIELGK 138 (198)
T ss_dssp EEEECC-C--T---HHHHHHHHT--EEE-EEEEEECSC
T ss_pred EEEECC-c--h---HHHHHHHHH--hcc-CCEEEEEcC
Confidence 998433 2 2 456777777 765 888776533
No 302
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=96.79 E-value=0.0091 Score=55.90 Aligned_cols=100 Identities=7% Similarity=-0.038 Sum_probs=74.5
Q ss_pred CCCCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCC-----------CcEEEEEeCCchhHHHHHHHHh
Q 042616 20 GKRGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQT-----------GGRVVCILSGVIGDIDASKKSL 88 (220)
Q Consensus 20 ~~~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~-----------~grV~tIE~d~~~~~~~Ar~~l 88 (220)
|+...++.+.+++..++...+..+|+|-.|| +|.+-+.....+... ...++++|.+ +..+..|+-|+
T Consensus 197 GqfyTP~~Vv~lmv~l~~p~~~~~I~DPacG-sGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~-~~~~~la~mNl 274 (530)
T 3ufb_A 197 GEFYTPRPVVRFMVEVMDPQLGESVLDPACG-TGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAK-SLPYLLVQMNL 274 (530)
T ss_dssp CCCCCCHHHHHHHHHHHCCCTTCCEEETTCT-TTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCS-HHHHHHHHHHH
T ss_pred ceECCcHHHHHHHHHhhccCCCCEEEeCCCC-cchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhcc-HHHHHHHHHHH
Confidence 5567888899999999998888999999987 787766555444321 2469999999 99999999887
Q ss_pred c--ccCCcEEEEEcchhhh-hhhc--CCCccEEEEcCCC
Q 042616 89 G--RYANCIEFVKGDAQKL-LMGD--YRGADFVLIDCNI 122 (220)
Q Consensus 89 ~--g~~~~Ve~v~gda~~~-L~~~--~~~~D~VfiD~~k 122 (220)
- |. +...+.++|.... +... ...||+|+-.++-
T Consensus 275 ~lhg~-~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf 312 (530)
T 3ufb_A 275 LLHGL-EYPRIDPENSLRFPLREMGDKDRVDVILTNPPF 312 (530)
T ss_dssp HHHTC-SCCEEECSCTTCSCGGGCCGGGCBSEEEECCCS
T ss_pred HhcCC-ccccccccccccCchhhhcccccceEEEecCCC
Confidence 5 65 3456778887542 1111 2479999988775
No 303
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.77 E-value=0.023 Score=49.72 Aligned_cols=102 Identities=13% Similarity=0.036 Sum_probs=68.4
Q ss_pred HhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcE-EEEEeCCchhHHHHHHHHhcccCCcEEEEE-----cchhhhhhhc
Q 042616 36 AAGNNAQLIVMACSSIAVSRTLALVAAARQTGGR-VVCILSGVIGDIDASKKSLGRYANCIEFVK-----GDAQKLLMGD 109 (220)
Q Consensus 36 a~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~gr-V~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~-----gda~~~L~~~ 109 (220)
+...+.++||-+|+|++|..++.||+++ |.+ |++++.+ +++.+.+++. .. ..+.... .+..+.+..+
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~aiqlak~~---Ga~~Vi~~~~~-~~~~~~a~~l-~~--~~~~~~~~~~~~~~~~~~v~~~ 247 (363)
T 3m6i_A 175 AGVRLGDPVLICGAGPIGLITMLCAKAA---GACPLVITDID-EGRLKFAKEI-CP--EVVTHKVERLSAEESAKKIVES 247 (363)
T ss_dssp HTCCTTCCEEEECCSHHHHHHHHHHHHT---TCCSEEEEESC-HHHHHHHHHH-CT--TCEEEECCSCCHHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc---CCCEEEEECCC-HHHHHHHHHh-ch--hcccccccccchHHHHHHHHHH
Confidence 3456678999999998999999999975 555 9999999 9999999987 31 2233321 2222223222
Q ss_pred --CCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 110 --YRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 110 --~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
...+|+||--... ...++.+.+. |++ ||.++.-..
T Consensus 248 t~g~g~Dvvid~~g~-----~~~~~~~~~~--l~~-~G~iv~~G~ 284 (363)
T 3m6i_A 248 FGGIEPAVALECTGV-----ESSIAAAIWA--VKF-GGKVFVIGV 284 (363)
T ss_dssp TSSCCCSEEEECSCC-----HHHHHHHHHH--SCT-TCEEEECCC
T ss_pred hCCCCCCEEEECCCC-----hHHHHHHHHH--hcC-CCEEEEEcc
Confidence 2479998743333 3456777777 765 777776544
No 304
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.75 E-value=0.0019 Score=56.52 Aligned_cols=105 Identities=17% Similarity=0.088 Sum_probs=68.2
Q ss_pred HhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCc-EEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc--CCC
Q 042616 36 AAGNNAQLIVMACSSIAVSRTLALVAAARQTGG-RVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD--YRG 112 (220)
Q Consensus 36 a~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~g-rV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~--~~~ 112 (220)
+...+.++||-+|+|++|..++.+|+++ +. +|++++.+ +++.+.+++.- ...-+.....+..+.+.++ ...
T Consensus 162 ~~~~~g~~VlV~GaG~vG~~a~qla~~~---Ga~~Vi~~~~~-~~~~~~~~~lG--a~~vi~~~~~~~~~~v~~~t~g~g 235 (352)
T 3fpc_A 162 ANIKLGDTVCVIGIGPVGLMSVAGANHL---GAGRIFAVGSR-KHCCDIALEYG--ATDIINYKNGDIVEQILKATDGKG 235 (352)
T ss_dssp TTCCTTCCEEEECCSHHHHHHHHHHHTT---TCSSEEEECCC-HHHHHHHHHHT--CCEEECGGGSCHHHHHHHHTTTCC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc---CCcEEEEECCC-HHHHHHHHHhC--CceEEcCCCcCHHHHHHHHcCCCC
Confidence 3456678999999998999999999874 44 89999999 89888888752 2111111123333333332 246
Q ss_pred ccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCCC
Q 042616 113 ADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNALP 154 (220)
Q Consensus 113 ~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~~ 154 (220)
+|+|| |+.- . ...++.+.+. |++ ||.++.-....
T Consensus 236 ~D~v~-d~~g--~--~~~~~~~~~~--l~~-~G~~v~~G~~~ 269 (352)
T 3fpc_A 236 VDKVV-IAGG--D--VHTFAQAVKM--IKP-GSDIGNVNYLG 269 (352)
T ss_dssp EEEEE-ECSS--C--TTHHHHHHHH--EEE-EEEEEECCCCC
T ss_pred CCEEE-ECCC--C--hHHHHHHHHH--Hhc-CCEEEEecccC
Confidence 99987 5443 1 2345666666 665 88887765543
No 305
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.73 E-value=0.0037 Score=56.10 Aligned_cols=97 Identities=12% Similarity=-0.050 Sum_probs=71.6
Q ss_pred CEEEEEcCCchHHHHHHHHHHcCCCCc-EEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhh-c------CCCc
Q 042616 42 QLIVMACSSIAVSRTLALVAAARQTGG-RVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMG-D------YRGA 113 (220)
Q Consensus 42 ~~ILEIGtg~~G~sTl~LA~A~~~~~g-rV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~-~------~~~~ 113 (220)
-+++|+.|| +|-.++.|..| |. .|.++|.| +.+++..+.|+. ...++++|..++.+. + ...+
T Consensus 3 ~~vidLFsG-~GGlslG~~~a----G~~~v~avE~d-~~a~~t~~~N~~----~~~~~~~DI~~~~~~~~~~~~~~~~~~ 72 (376)
T 3g7u_A 3 LNVIDLFSG-VGGLSLGAARA----GFDVKMAVEID-QHAINTHAINFP----RSLHVQEDVSLLNAEIIKGFFKNDMPI 72 (376)
T ss_dssp CEEEEETCT-TSHHHHHHHHH----TCEEEEEECSC-HHHHHHHHHHCT----TSEEECCCGGGCCHHHHHHHHCSCCCC
T ss_pred CeEEEEccC-cCHHHHHHHHC----CCcEEEEEeCC-HHHHHHHHHhCC----CCceEecChhhcCHHHHHhhcccCCCe
Confidence 479999986 89999998887 44 46799999 998888888873 456778888765322 1 2579
Q ss_pred cEEEEcCCC--------------CCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 114 DFVLIDCNI--------------DIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 114 D~VfiD~~k--------------~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
|+|+.+.+= ++..+.++++.+... +| -++|..||-
T Consensus 73 D~i~ggpPCQ~fS~ag~~~~~d~r~~L~~~~~~~v~~~---~P--~~~v~ENV~ 121 (376)
T 3g7u_A 73 DGIIGGPPCQGFSSIGKGNPDDSRNQLYMHFYRLVSEL---QP--LFFLAENVP 121 (376)
T ss_dssp CEEEECCCCCTTC-------CHHHHHHHHHHHHHHHHH---CC--SEEEEEECT
T ss_pred eEEEecCCCCCcccccCCCCCCchHHHHHHHHHHHHHh---CC--CEEEEecch
Confidence 999999871 113467778888775 45 678888884
No 306
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.70 E-value=0.0037 Score=55.72 Aligned_cols=106 Identities=8% Similarity=-0.009 Sum_probs=68.0
Q ss_pred HhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCc-EEEEEeCCchhHHHHHHHHhcccCCcEEEEEcch-hhhhhhc-C-C
Q 042616 36 AAGNNAQLIVMACSSIAVSRTLALVAAARQTGG-RVVCILSGVIGDIDASKKSLGRYANCIEFVKGDA-QKLLMGD-Y-R 111 (220)
Q Consensus 36 a~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~g-rV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda-~~~L~~~-~-~ 111 (220)
+...+.++||.+|+|++|..++.+|++. +. +|++++.+ +++++.+++. |. +.+.....+. .+.+..+ . .
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlak~~---Ga~~Vi~~~~~-~~~~~~a~~l--Ga-~~i~~~~~~~~~~~~~~~~~g~ 253 (398)
T 2dph_A 181 AGVKPGSHVYIAGAGPVGRCAAAGARLL---GAACVIVGDQN-PERLKLLSDA--GF-ETIDLRNSAPLRDQIDQILGKP 253 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHH---TCSEEEEEESC-HHHHHHHHTT--TC-EEEETTSSSCHHHHHHHHHSSS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc---CCCEEEEEcCC-HHHHHHHHHc--CC-cEEcCCCcchHHHHHHHHhCCC
Confidence 3455678999999988899999999875 44 99999999 8988888753 32 2121111232 3333222 2 3
Q ss_pred CccEEEEcCCCCCcc-----------HHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 112 GADFVLIDCNIDIDG-----------HKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 112 ~~D~VfiD~~k~~~~-----------y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
.+|+||--... .. ....++.+.+. |++ ||.++.-...
T Consensus 254 g~Dvvid~~g~--~~~~~~~~~~~~~~~~~~~~~~~~--l~~-gG~iv~~G~~ 301 (398)
T 2dph_A 254 EVDCGVDAVGF--EAHGLGDEANTETPNGALNSLFDV--VRA-GGAIGIPGIY 301 (398)
T ss_dssp CEEEEEECSCT--TCBCSGGGTTSBCTTHHHHHHHHH--EEE-EEEEECCSCC
T ss_pred CCCEEEECCCC--ccccccccccccccHHHHHHHHHH--Hhc-CCEEEEeccc
Confidence 69998744433 21 12357777777 765 8877765443
No 307
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=96.69 E-value=0.0032 Score=55.75 Aligned_cols=105 Identities=16% Similarity=0.119 Sum_probs=67.9
Q ss_pred hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEE--Ecchhhhhhhc-CCCcc
Q 042616 38 GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFV--KGDAQKLLMGD-YRGAD 114 (220)
Q Consensus 38 ~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v--~gda~~~L~~~-~~~~D 114 (220)
..+.++||-+|+|++|..++.+|+++. ..+|++++.+ +++.+.|++. |...-+... ..+..+.+..+ .+.+|
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~G--a~~Vi~~~~~-~~~~~~a~~l--Ga~~vi~~~~~~~~~~~~i~~~~~gg~D 265 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTAG--ASRIIGIDID-SKKYETAKKF--GVNEFVNPKDHDKPIQEVIVDLTDGGVD 265 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHHT--CSCEEEECSC-TTHHHHHHTT--TCCEEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC--CCeEEEEcCC-HHHHHHHHHc--CCcEEEccccCchhHHHHHHHhcCCCCC
Confidence 345789999999889999999999863 2489999999 9999988764 221111111 12333333332 34799
Q ss_pred EEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCCC
Q 042616 115 FVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNALP 154 (220)
Q Consensus 115 ~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~~ 154 (220)
+|| |+-- ....++.+.+. |++.+|.++.-....
T Consensus 266 ~vi-d~~g----~~~~~~~~~~~--l~~g~G~iv~~G~~~ 298 (378)
T 3uko_A 266 YSF-ECIG----NVSVMRAALEC--CHKGWGTSVIVGVAA 298 (378)
T ss_dssp EEE-ECSC----CHHHHHHHHHT--BCTTTCEEEECSCCC
T ss_pred EEE-ECCC----CHHHHHHHHHH--hhccCCEEEEEcccC
Confidence 987 4433 24567778887 765227777765543
No 308
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=96.66 E-value=0.0053 Score=54.10 Aligned_cols=101 Identities=12% Similarity=0.056 Sum_probs=66.5
Q ss_pred hCCCCEEEEEcCCchHHHHHHHHHHcCCCCc-EEEEEeCCchhHHHHHHHHhcccCCcE-EEEE--cchhhhhhhc-CCC
Q 042616 38 GNNAQLIVMACSSIAVSRTLALVAAARQTGG-RVVCILSGVIGDIDASKKSLGRYANCI-EFVK--GDAQKLLMGD-YRG 112 (220)
Q Consensus 38 ~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~g-rV~tIE~d~~~~~~~Ar~~l~g~~~~V-e~v~--gda~~~L~~~-~~~ 112 (220)
..+.++||-+|+|++|..++.||+++ +. +|++++.+ +++.+.+++. |. +.+ .... .+..+.+.++ .+.
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~---Ga~~Vi~~~~~-~~~~~~a~~l--Ga-~~vi~~~~~~~~~~~~i~~~t~gg 261 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAA---GASRIIGVGTH-KDKFPKAIEL--GA-TECLNPKDYDKPIYEVICEKTNGG 261 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHH---TCSEEEEECSC-GGGHHHHHHT--TC-SEEECGGGCSSCHHHHHHHHTTSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc---CCCeEEEECCC-HHHHHHHHHc--CC-cEEEecccccchHHHHHHHHhCCC
Confidence 44568999999998999999999876 44 89999999 9999988753 22 111 1110 1233333332 247
Q ss_pred ccEEEEcCCCCCccHHHHHHHHHhhcCCCCCC-EEEEEecCC
Q 042616 113 ADFVLIDCNIDIDGHKNVFRAAKESVMHGSGA-GVIVGYNAL 153 (220)
Q Consensus 113 ~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~G-gviv~dNv~ 153 (220)
+|+|| |+-- ....++.+.+. |++ | |.++.-...
T Consensus 262 ~Dvvi-d~~g----~~~~~~~~~~~--l~~-~~G~iv~~G~~ 295 (373)
T 1p0f_A 262 VDYAV-ECAG----RIETMMNALQS--TYC-GSGVTVVLGLA 295 (373)
T ss_dssp BSEEE-ECSC----CHHHHHHHHHT--BCT-TTCEEEECCCC
T ss_pred CCEEE-ECCC----CHHHHHHHHHH--Hhc-CCCEEEEEccC
Confidence 99987 4433 23557777777 765 6 777765443
No 309
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.65 E-value=0.0029 Score=55.97 Aligned_cols=101 Identities=10% Similarity=0.045 Sum_probs=69.9
Q ss_pred CCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcC--CCccEEEE
Q 042616 41 AQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDY--RGADFVLI 118 (220)
Q Consensus 41 a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~--~~~D~Vfi 118 (220)
+.+++|+.|| +|-.++.|..+.-. ...|+++|.| +.+++..+.|+. ...++++|..++.+... ..+|+|+.
T Consensus 2 ~~~v~dLFaG-~Gg~~~g~~~~G~~-~~~v~~~E~d-~~a~~~~~~N~~----~~~~~~~Di~~~~~~~~~~~~~D~l~~ 74 (343)
T 1g55_A 2 PLRVLELYSG-VGGMHHALRESCIP-AQVVAAIDVN-TVANEVYKYNFP----HTQLLAKTIEGITLEEFDRLSFDMILM 74 (343)
T ss_dssp CEEEEEETCT-TCHHHHHHHHHTCS-EEEEEEECCC-HHHHHHHHHHCT----TSCEECSCGGGCCHHHHHHHCCSEEEE
T ss_pred CCeEEEeCcC-ccHHHHHHHHCCCC-ceEEEEEeCC-HHHHHHHHHhcc----ccccccCCHHHccHhHcCcCCcCEEEE
Confidence 3579999997 89999998876210 1368999999 999999999984 23477888887653211 26999999
Q ss_pred cCC---------C------CCccHHHHHHHHHhhcCCC--CCCEEEEEecCC
Q 042616 119 DCN---------I------DIDGHKNVFRAAKESVMHG--SGAGVIVGYNAL 153 (220)
Q Consensus 119 D~~---------k------~~~~y~~~l~~l~~~~~L~--~~Ggviv~dNv~ 153 (220)
+.+ + +...+.++++.+.. ++ | -+++..||-
T Consensus 75 gpPCq~fS~ag~~~g~~d~r~~l~~~~~~~i~~---~~~~P--~~~~~ENV~ 121 (343)
T 1g55_A 75 SPPCQPFTRIGRQGDMTDSRTNSFLHILDILPR---LQKLP--KYILLENVK 121 (343)
T ss_dssp CCC------------------CHHHHHHHHGGG---CSSCC--SEEEEEEET
T ss_pred cCCCcchhhcCCcCCccCccchHHHHHHHHHHH---hcCCC--CEEEEeCCc
Confidence 987 1 11244566776665 34 4 366667775
No 310
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.64 E-value=0.012 Score=52.05 Aligned_cols=99 Identities=14% Similarity=0.107 Sum_probs=65.1
Q ss_pred hhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccEE
Q 042616 37 AGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFV 116 (220)
Q Consensus 37 ~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~V 116 (220)
...+.++||.+|+|++|..++.||+++ +.+|++++.+ +++.+.+++. |. + .++.-.-.+.+..+...+|+|
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~---Ga~Vi~~~~~-~~~~~~a~~l--Ga-~--~vi~~~~~~~~~~~~~g~Dvv 261 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAM---GAHVVAFTTS-EAKREAAKAL--GA-D--EVVNSRNADEMAAHLKSFDFI 261 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHT---TCEEEEEESS-GGGHHHHHHH--TC-S--EEEETTCHHHHHTTTTCEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC---CCEEEEEeCC-HHHHHHHHHc--CC-c--EEeccccHHHHHHhhcCCCEE
Confidence 345678999999988999999999875 6789999999 9999988863 22 2 222222223333333679998
Q ss_pred EEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 117 LIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 117 fiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
|--... .. .++.+.+. |++ ||.++.-..
T Consensus 262 id~~g~--~~---~~~~~~~~--l~~-~G~iv~~G~ 289 (369)
T 1uuf_A 262 LNTVAA--PH---NLDDFTTL--LKR-DGTMTLVGA 289 (369)
T ss_dssp EECCSS--CC---CHHHHHTT--EEE-EEEEEECCC
T ss_pred EECCCC--HH---HHHHHHHH--hcc-CCEEEEecc
Confidence 744433 21 24555666 665 777776543
No 311
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=96.61 E-value=0.01 Score=51.89 Aligned_cols=102 Identities=8% Similarity=0.048 Sum_probs=65.7
Q ss_pred HhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCc-EEEEE-cchhhhhhhc----
Q 042616 36 AAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANC-IEFVK-GDAQKLLMGD---- 109 (220)
Q Consensus 36 a~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~-Ve~v~-gda~~~L~~~---- 109 (220)
+...+.++||-+|+|++|..++.+|+++ +.+|++++.+ +++.+.+++. |. +. +.... .+..+.+...
T Consensus 164 ~~~~~g~~VlV~GaG~vG~~a~qla~~~---Ga~Vi~~~~~-~~~~~~~~~l--Ga-~~~~~~~~~~~~~~~i~~~~~~~ 236 (352)
T 1e3j_A 164 AGVQLGTTVLVIGAGPIGLVSVLAAKAY---GAFVVCTARS-PRRLEVAKNC--GA-DVTLVVDPAKEEESSIIERIRSA 236 (352)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHT---TCEEEEEESC-HHHHHHHHHT--TC-SEEEECCTTTSCHHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc---CCEEEEEcCC-HHHHHHHHHh--CC-CEEEcCcccccHHHHHHHHhccc
Confidence 3455678999999988999999999875 5689999999 9998888753 22 21 11110 2222222221
Q ss_pred -CCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 110 -YRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 110 -~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
...+|+||--... ...++.+.+. |++ ||.++.-..
T Consensus 237 ~g~g~D~vid~~g~-----~~~~~~~~~~--l~~-~G~iv~~G~ 272 (352)
T 1e3j_A 237 IGDLPNVTIDCSGN-----EKCITIGINI--TRT-GGTLMLVGM 272 (352)
T ss_dssp SSSCCSEEEECSCC-----HHHHHHHHHH--SCT-TCEEEECSC
T ss_pred cCCCCCEEEECCCC-----HHHHHHHHHH--Hhc-CCEEEEEec
Confidence 2469998743333 3456777777 766 777776543
No 312
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=96.59 E-value=0.0062 Score=53.72 Aligned_cols=99 Identities=15% Similarity=0.104 Sum_probs=65.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCc-EEEEEeCCchhHHHHHHHHhcccCCc-EEEEE--cchhhhhhhc-CCCc
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGG-RVVCILSGVIGDIDASKKSLGRYANC-IEFVK--GDAQKLLMGD-YRGA 113 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~g-rV~tIE~d~~~~~~~Ar~~l~g~~~~-Ve~v~--gda~~~L~~~-~~~~ 113 (220)
.+.++||-+|+|++|..++.||+++ +. +|++++.+ +++.+.+++. |. +. +.... .+..+.+..+ .+.+
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~---Ga~~Vi~~~~~-~~~~~~a~~l--Ga-~~vi~~~~~~~~~~~~v~~~~~~g~ 266 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKIA---GASRIIAIDIN-GEKFPKAKAL--GA-TDCLNPRELDKPVQDVITELTAGGV 266 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT---TCSEEEEECSC-GGGHHHHHHT--TC-SEEECGGGCSSCHHHHHHHHHTSCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc---CCCeEEEEcCC-HHHHHHHHHh--CC-cEEEccccccchHHHHHHHHhCCCc
Confidence 4568999999988999999999875 55 89999999 9999888753 22 11 11110 1233333222 2479
Q ss_pred cEEEEcCCCCCccHHHHHHHHHhhcCCCCCC-EEEEEecC
Q 042616 114 DFVLIDCNIDIDGHKNVFRAAKESVMHGSGA-GVIVGYNA 152 (220)
Q Consensus 114 D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~G-gviv~dNv 152 (220)
|+|| |+-- ....++.+.+. |++ | |.++.-..
T Consensus 267 Dvvi-d~~G----~~~~~~~~~~~--l~~-~~G~iv~~G~ 298 (376)
T 1e3i_A 267 DYSL-DCAG----TAQTLKAAVDC--TVL-GWGSCTVVGA 298 (376)
T ss_dssp SEEE-ESSC----CHHHHHHHHHT--BCT-TTCEEEECCC
T ss_pred cEEE-ECCC----CHHHHHHHHHH--hhc-CCCEEEEECC
Confidence 9987 4433 23567777777 775 6 77776544
No 313
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.57 E-value=0.0071 Score=53.30 Aligned_cols=101 Identities=18% Similarity=0.100 Sum_probs=65.8
Q ss_pred hCCCCEEEEEcCCchHHHHHHHHHHcCCCCc-EEEEEeCCchhHHHHHHHHhcccCCcE-EEEE--cchhhhhhhc-CCC
Q 042616 38 GNNAQLIVMACSSIAVSRTLALVAAARQTGG-RVVCILSGVIGDIDASKKSLGRYANCI-EFVK--GDAQKLLMGD-YRG 112 (220)
Q Consensus 38 ~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~g-rV~tIE~d~~~~~~~Ar~~l~g~~~~V-e~v~--gda~~~L~~~-~~~ 112 (220)
..+.++||.+|+|++|..++.+|+++ +. +|++++.+ +++.+.+++. |. +.+ .... .+..+.+..+ .+.
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~---Ga~~Vi~~~~~-~~~~~~~~~l--Ga-~~vi~~~~~~~~~~~~~~~~~~~g 262 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSA---GAKRIIAVDLN-PDKFEKAKVF--GA-TDFVNPNDHSEPISQVLSKMTNGG 262 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT---TCSEEEEECSC-GGGHHHHHHT--TC-CEEECGGGCSSCHHHHHHHHHTSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc---CCCEEEEEcCC-HHHHHHHHHh--CC-ceEEeccccchhHHHHHHHHhCCC
Confidence 34568999999988999999999875 55 89999999 9999988753 22 111 1100 1233333222 247
Q ss_pred ccEEEEcCCCCCccHHHHHHHHHhhcCCCCCC-EEEEEecCC
Q 042616 113 ADFVLIDCNIDIDGHKNVFRAAKESVMHGSGA-GVIVGYNAL 153 (220)
Q Consensus 113 ~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~G-gviv~dNv~ 153 (220)
+|+|| |+-- ....++.+.+. |++ | |.+|.-...
T Consensus 263 ~D~vi-d~~g----~~~~~~~~~~~--l~~-~~G~iv~~G~~ 296 (374)
T 1cdo_A 263 VDFSL-ECVG----NVGVMRNALES--CLK-GWGVSVLVGWT 296 (374)
T ss_dssp BSEEE-ECSC----CHHHHHHHHHT--BCT-TTCEEEECSCC
T ss_pred CCEEE-ECCC----CHHHHHHHHHH--hhc-CCcEEEEEcCC
Confidence 99987 4433 13457777777 776 6 777765443
No 314
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=96.57 E-value=0.0062 Score=54.47 Aligned_cols=105 Identities=11% Similarity=0.036 Sum_probs=64.3
Q ss_pred hCCCCEEEEEcCCchHHHHHHHHHHcCCCCc-EEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc--CCCcc
Q 042616 38 GNNAQLIVMACSSIAVSRTLALVAAARQTGG-RVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD--YRGAD 114 (220)
Q Consensus 38 ~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~g-rV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~--~~~~D 114 (220)
..+.++||-+|+|++|..++.||+++ +. +|++++.+ +++.+.+++.= ...-+.....|..+.+..+ ...+|
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~---Ga~~Vi~~~~~-~~~~~~~~~lG--a~~vi~~~~~~~~~~i~~~t~g~g~D 284 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHA---GASKVILSEPS-EVRRNLAKELG--ADHVIDPTKENFVEAVLDYTNGLGAK 284 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT---TCSEEEEECSC-HHHHHHHHHHT--CSEEECTTTSCHHHHHHHHTTTCCCS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc---CCCEEEEECCC-HHHHHHHHHcC--CCEEEcCCCCCHHHHHHHHhCCCCCC
Confidence 34568999999998999999999875 45 99999999 99999888752 1111111112333333333 24699
Q ss_pred EEEEcCCCCCc--cHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 115 FVLIDCNIDID--GHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 115 ~VfiD~~k~~~--~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
+||--... . .+...++.+... +++ ||.++.-...
T Consensus 285 ~vid~~g~--~~~~~~~~~~~l~~~--~~~-~G~iv~~G~~ 320 (404)
T 3ip1_A 285 LFLEATGV--PQLVWPQIEEVIWRA--RGI-NATVAIVARA 320 (404)
T ss_dssp EEEECSSC--HHHHHHHHHHHHHHC--SCC-CCEEEECSCC
T ss_pred EEEECCCC--cHHHHHHHHHHHHhc--cCC-CcEEEEeCCC
Confidence 88744333 2 222333333233 365 7777775444
No 315
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=96.52 E-value=0.0079 Score=52.99 Aligned_cols=101 Identities=15% Similarity=0.054 Sum_probs=65.8
Q ss_pred hCCCCEEEEEcCCchHHHHHHHHHHcCCCCc-EEEEEeCCchhHHHHHHHHhcccCCc-EEEEE--cchhhhhhhc-CCC
Q 042616 38 GNNAQLIVMACSSIAVSRTLALVAAARQTGG-RVVCILSGVIGDIDASKKSLGRYANC-IEFVK--GDAQKLLMGD-YRG 112 (220)
Q Consensus 38 ~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~g-rV~tIE~d~~~~~~~Ar~~l~g~~~~-Ve~v~--gda~~~L~~~-~~~ 112 (220)
..+.++||-+|+|++|..++.+|+++ +. +|++++.+ +++.+.+++. |. +. +.... .+..+.+..+ .+.
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~~---Ga~~Vi~~~~~-~~~~~~~~~l--Ga-~~vi~~~~~~~~~~~~~~~~~~~g 261 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKAA---GAARIIGVDIN-KDKFAKAKEV--GA-TECVNPQDYKKPIQEVLTEMSNGG 261 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT---TCSEEEEECSC-GGGHHHHHHT--TC-SEEECGGGCSSCHHHHHHHHTTSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc---CCCeEEEEcCC-HHHHHHHHHh--CC-ceEecccccchhHHHHHHHHhCCC
Confidence 34568999999988999999999875 55 89999999 9999888753 22 11 11110 1233333332 247
Q ss_pred ccEEEEcCCCCCccHHHHHHHHHhhcCCCCCC-EEEEEecCC
Q 042616 113 ADFVLIDCNIDIDGHKNVFRAAKESVMHGSGA-GVIVGYNAL 153 (220)
Q Consensus 113 ~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~G-gviv~dNv~ 153 (220)
+|+|| |+-- ....++.+.+. |++ | |.++.-...
T Consensus 262 ~D~vi-d~~g----~~~~~~~~~~~--l~~-~~G~iv~~G~~ 295 (374)
T 2jhf_A 262 VDFSF-EVIG----RLDTMVTALSC--CQE-AYGVSVIVGVP 295 (374)
T ss_dssp BSEEE-ECSC----CHHHHHHHHHH--BCT-TTCEEEECSCC
T ss_pred CcEEE-ECCC----CHHHHHHHHHH--hhc-CCcEEEEeccC
Confidence 99887 4433 13456777777 765 6 777765443
No 316
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=96.52 E-value=0.0081 Score=52.86 Aligned_cols=101 Identities=17% Similarity=0.116 Sum_probs=66.1
Q ss_pred hCCCCEEEEEcCCchHHHHHHHHHHcCCCCc-EEEEEeCCchhHHHHHHHHhcccCCcE-EEEE--cchhhhhhhc-CCC
Q 042616 38 GNNAQLIVMACSSIAVSRTLALVAAARQTGG-RVVCILSGVIGDIDASKKSLGRYANCI-EFVK--GDAQKLLMGD-YRG 112 (220)
Q Consensus 38 ~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~g-rV~tIE~d~~~~~~~Ar~~l~g~~~~V-e~v~--gda~~~L~~~-~~~ 112 (220)
..+.++||-+|+|++|..++.+|+++ +. +|++++.+ +++.+.+++. |. +.+ .... .+..+.+.++ .+.
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~~---Ga~~Vi~~~~~-~~~~~~~~~l--Ga-~~vi~~~~~~~~~~~~v~~~~~~g 260 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKVA---GASRIIGVDIN-KDKFARAKEF--GA-TECINPQDFSKPIQEVLIEMTDGG 260 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHH---TCSEEEEECSC-GGGHHHHHHH--TC-SEEECGGGCSSCHHHHHHHHTTSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc---CCCeEEEEcCC-HHHHHHHHHc--CC-ceEeccccccccHHHHHHHHhCCC
Confidence 34568999999988999999999876 45 89999999 9999988754 22 111 1100 1233333332 247
Q ss_pred ccEEEEcCCCCCccHHHHHHHHHhhcCCCCCC-EEEEEecCC
Q 042616 113 ADFVLIDCNIDIDGHKNVFRAAKESVMHGSGA-GVIVGYNAL 153 (220)
Q Consensus 113 ~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~G-gviv~dNv~ 153 (220)
+|+|| |+.- ....++.+.+. |++ | |.++.-...
T Consensus 261 ~D~vi-d~~g----~~~~~~~~~~~--l~~-~~G~iv~~G~~ 294 (373)
T 2fzw_A 261 VDYSF-ECIG----NVKVMRAALEA--CHK-GWGVSVVVGVA 294 (373)
T ss_dssp BSEEE-ECSC----CHHHHHHHHHT--BCT-TTCEEEECSCC
T ss_pred CCEEE-ECCC----cHHHHHHHHHh--hcc-CCcEEEEEecC
Confidence 99987 4433 13456777777 776 6 777765443
No 317
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.50 E-value=0.0043 Score=56.16 Aligned_cols=51 Identities=16% Similarity=0.094 Sum_probs=41.2
Q ss_pred hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcc
Q 042616 38 GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGR 90 (220)
Q Consensus 38 ~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g 90 (220)
..+...++|+|++ .|++|+.++.......++|+++|++ |..++..++|++.
T Consensus 224 l~~~~~viDvGAn-~G~~s~~~a~~~~~~~~~V~afEP~-p~~~~~L~~n~~~ 274 (409)
T 2py6_A 224 FSDSEKMVDCGAS-IGESLAGLIGVTKGKFERVWMIEPD-RINLQTLQNVLRR 274 (409)
T ss_dssp CCSSCEEEEETCT-TSHHHHHHHHHHTSCCSEEEEECCC-HHHHHHHHHHHHH
T ss_pred cCCCCEEEECCCC-cCHHHHHHHHHhcCCCCEEEEEcCC-HHHHHHHHHHHHh
Confidence 3567899999986 9999999884332225899999999 9999999988753
No 318
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=96.43 E-value=0.014 Score=50.74 Aligned_cols=103 Identities=11% Similarity=-0.001 Sum_probs=68.2
Q ss_pred hhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc--CCCcc
Q 042616 37 AGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD--YRGAD 114 (220)
Q Consensus 37 ~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~--~~~~D 114 (220)
...+.++||-+|+|++|..++.||+++. +.+|++++.+ +++.+.+++. |. +.+--...+..+.+.++ ...+|
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g--~~~Vi~~~~~-~~~~~~~~~l--Ga-~~~i~~~~~~~~~v~~~t~g~g~d 241 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVS--AARVIAVDLD-DDRLALAREV--GA-DAAVKSGAGAADAIRELTGGQGAT 241 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHC--CCEEEEEESC-HHHHHHHHHT--TC-SEEEECSTTHHHHHHHHHGGGCEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC--CCEEEEEcCC-HHHHHHHHHc--CC-CEEEcCCCcHHHHHHHHhCCCCCe
Confidence 4456789999999889999999998863 5799999999 9999988764 22 11111112333333222 23799
Q ss_pred EEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 115 FVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 115 ~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
+||--... ...++.+.+. |++ ||.++.-...
T Consensus 242 ~v~d~~G~-----~~~~~~~~~~--l~~-~G~iv~~G~~ 272 (345)
T 3jv7_A 242 AVFDFVGA-----QSTIDTAQQV--VAV-DGHISVVGIH 272 (345)
T ss_dssp EEEESSCC-----HHHHHHHHHH--EEE-EEEEEECSCC
T ss_pred EEEECCCC-----HHHHHHHHHH--Hhc-CCEEEEECCC
Confidence 87743333 3466777777 765 8887776543
No 319
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=96.42 E-value=0.0098 Score=52.44 Aligned_cols=97 Identities=9% Similarity=-0.043 Sum_probs=63.3
Q ss_pred CCCEEEEEc-CCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc-CCCccEEE
Q 042616 40 NAQLIVMAC-SSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD-YRGADFVL 117 (220)
Q Consensus 40 ~a~~ILEIG-tg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~-~~~~D~Vf 117 (220)
+.+.||-+| +|++|..++.+|+++. +.+|++++.+ +++.+.+++. |. +.+--...+..+.+..+ .+.+|+||
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~--g~~Vi~~~~~-~~~~~~~~~l--Ga-d~vi~~~~~~~~~v~~~~~~g~Dvvi 244 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRT--DLTVIATASR-PETQEWVKSL--GA-HHVIDHSKPLAAEVAALGLGAPAFVF 244 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHC--CSEEEEECSS-HHHHHHHHHT--TC-SEEECTTSCHHHHHHTTCSCCEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhc--CCEEEEEeCC-HHHHHHHHHc--CC-CEEEeCCCCHHHHHHHhcCCCceEEE
Confidence 456899998 7889999999998753 6799999999 9999888763 22 11110112333333333 25799776
Q ss_pred EcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 118 IDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 118 iD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
|+.- ....++.+.+. |++ ||.++.-
T Consensus 245 -d~~g----~~~~~~~~~~~--l~~-~G~iv~~ 269 (363)
T 4dvj_A 245 -STTH----TDKHAAEIADL--IAP-QGRFCLI 269 (363)
T ss_dssp -ECSC----HHHHHHHHHHH--SCT-TCEEEEC
T ss_pred -ECCC----chhhHHHHHHH--hcC-CCEEEEE
Confidence 5543 33567777777 776 6666553
No 320
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=96.38 E-value=0.011 Score=51.92 Aligned_cols=98 Identities=17% Similarity=0.120 Sum_probs=64.4
Q ss_pred hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEE---cchhhhhhhc--CCC
Q 042616 38 GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVK---GDAQKLLMGD--YRG 112 (220)
Q Consensus 38 ~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~---gda~~~L~~~--~~~ 112 (220)
..+.++||-+|+|++|..++.+|++. +.+|++++.+ +++.+.+++. |. +. ++. .+..+.+..+ ...
T Consensus 187 ~~~g~~VlV~G~G~vG~~a~qla~~~---Ga~Vi~~~~~-~~~~~~~~~l--Ga-~~--vi~~~~~~~~~~v~~~~~g~g 257 (363)
T 3uog_A 187 LRAGDRVVVQGTGGVALFGLQIAKAT---GAEVIVTSSS-REKLDRAFAL--GA-DH--GINRLEEDWVERVYALTGDRG 257 (363)
T ss_dssp CCTTCEEEEESSBHHHHHHHHHHHHT---TCEEEEEESC-HHHHHHHHHH--TC-SE--EEETTTSCHHHHHHHHHTTCC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc---CCEEEEEecC-chhHHHHHHc--CC-CE--EEcCCcccHHHHHHHHhCCCC
Confidence 44578999999988999999999875 6799999999 9988888764 22 21 222 2233333222 247
Q ss_pred ccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 113 ADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 113 ~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
+|+||--... .. ++.+.+. |++ ||.++.-...
T Consensus 258 ~D~vid~~g~--~~----~~~~~~~--l~~-~G~iv~~G~~ 289 (363)
T 3uog_A 258 ADHILEIAGG--AG----LGQSLKA--VAP-DGRISVIGVL 289 (363)
T ss_dssp EEEEEEETTS--SC----HHHHHHH--EEE-EEEEEEECCC
T ss_pred ceEEEECCCh--HH----HHHHHHH--hhc-CCEEEEEecC
Confidence 9988744443 33 4555566 655 7777765444
No 321
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=96.37 E-value=0.024 Score=49.26 Aligned_cols=100 Identities=10% Similarity=-0.008 Sum_probs=65.9
Q ss_pred hhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcch-hhhhhhc--CCCc
Q 042616 37 AGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDA-QKLLMGD--YRGA 113 (220)
Q Consensus 37 ~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda-~~~L~~~--~~~~ 113 (220)
.. +.++||-+|+|++|..++.+|+++.+ +.+|++++.+ +++.+.+++. |. +. ++.-+. .+.+..+ ...+
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~-Ga~Vi~~~~~-~~~~~~~~~l--Ga-~~--vi~~~~~~~~~~~~~~g~g~ 239 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMK-NITIVGISRS-KKHRDFALEL--GA-DY--VSEMKDAESLINKLTDGLGA 239 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCT-TCEEEEECSC-HHHHHHHHHH--TC-SE--EECHHHHHHHHHHHHTTCCE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcC-CCEEEEEeCC-HHHHHHHHHh--CC-CE--EeccccchHHHHHhhcCCCc
Confidence 44 77999999998899999999998632 5689999999 8988888763 22 21 222111 2222222 2379
Q ss_pred cEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 114 DFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 114 D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
|+||--... ...++.+.+. |++ ||.++.-..
T Consensus 240 D~vid~~g~-----~~~~~~~~~~--l~~-~G~iv~~g~ 270 (344)
T 2h6e_A 240 SIAIDLVGT-----EETTYNLGKL--LAQ-EGAIILVGM 270 (344)
T ss_dssp EEEEESSCC-----HHHHHHHHHH--EEE-EEEEEECCC
T ss_pred cEEEECCCC-----hHHHHHHHHH--hhc-CCEEEEeCC
Confidence 998744333 3356777777 765 787776544
No 322
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=96.35 E-value=0.0062 Score=52.64 Aligned_cols=101 Identities=14% Similarity=0.161 Sum_probs=65.1
Q ss_pred hCCCCEEEEEc-CCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc--CCCcc
Q 042616 38 GNNAQLIVMAC-SSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD--YRGAD 114 (220)
Q Consensus 38 ~~~a~~ILEIG-tg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~--~~~~D 114 (220)
..+.++||-+| +|++|..++.+|++. +.+|++++.+ +++.+.+++. |....+.....+..+.+.+. ...+|
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~---Ga~Vi~~~~~-~~~~~~~~~~--Ga~~~~~~~~~~~~~~~~~~~~~~g~D 211 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKAL---GAKLIGTVSS-PEKAAHAKAL--GAWETIDYSHEDVAKRVLELTDGKKCP 211 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHH---TCEEEEEESS-HHHHHHHHHH--TCSEEEETTTSCHHHHHHHHTTTCCEE
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHC---CCEEEEEeCC-HHHHHHHHHc--CCCEEEeCCCccHHHHHHHHhCCCCce
Confidence 34578999999 688999999888875 6799999999 9999888764 21111111112333333232 24799
Q ss_pred EEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 115 FVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 115 ~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
++| |+.- . ..++.+.+. |++ ||.++.-...
T Consensus 212 vvi-d~~g--~---~~~~~~~~~--l~~-~G~iv~~g~~ 241 (325)
T 3jyn_A 212 VVY-DGVG--Q---DTWLTSLDS--VAP-RGLVVSFGNA 241 (325)
T ss_dssp EEE-ESSC--G---GGHHHHHTT--EEE-EEEEEECCCT
T ss_pred EEE-ECCC--h---HHHHHHHHH--hcC-CCEEEEEecC
Confidence 876 4443 2 346677777 765 8887776543
No 323
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=96.33 E-value=0.005 Score=53.39 Aligned_cols=100 Identities=14% Similarity=0.156 Sum_probs=64.4
Q ss_pred hCCCCEEEEEc-CCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCc-EEEEEcchhhhhhhc--CCCc
Q 042616 38 GNNAQLIVMAC-SSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANC-IEFVKGDAQKLLMGD--YRGA 113 (220)
Q Consensus 38 ~~~a~~ILEIG-tg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~-Ve~v~gda~~~L~~~--~~~~ 113 (220)
..+.++||-+| +|++|..++.+|++. +.+|++++.+ +++.+.+++. |. +. +.....+..+.+... ...+
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~---Ga~Vi~~~~~-~~~~~~~~~~--ga-~~~~~~~~~~~~~~~~~~~~~~g~ 218 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLKMK---GAHTIAVAST-DEKLKIAKEY--GA-EYLINASKEDILRQVLKFTNGKGV 218 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT---TCEEEEEESS-HHHHHHHHHT--TC-SEEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEeCC-HHHHHHHHHc--CC-cEEEeCCCchHHHHHHHHhCCCCc
Confidence 35578999999 678999988888864 6799999999 8888888764 21 11 111112333333222 2469
Q ss_pred cEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 114 DFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 114 D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
|++| |+.- . ..++.+.+. |++ ||.++.-...
T Consensus 219 D~vi-d~~g--~---~~~~~~~~~--l~~-~G~iv~~G~~ 249 (334)
T 3qwb_A 219 DASF-DSVG--K---DTFEISLAA--LKR-KGVFVSFGNA 249 (334)
T ss_dssp EEEE-ECCG--G---GGHHHHHHH--EEE-EEEEEECCCT
T ss_pred eEEE-ECCC--h---HHHHHHHHH--hcc-CCEEEEEcCC
Confidence 9886 4433 2 346666676 765 7887775443
No 324
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=96.33 E-value=0.011 Score=51.99 Aligned_cols=101 Identities=12% Similarity=0.089 Sum_probs=66.2
Q ss_pred HhhCCCCEEEEEc-CCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcE-EEEEcchhhhhhhc-CCC
Q 042616 36 AAGNNAQLIVMAC-SSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCI-EFVKGDAQKLLMGD-YRG 112 (220)
Q Consensus 36 a~~~~a~~ILEIG-tg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~V-e~v~gda~~~L~~~-~~~ 112 (220)
+...+.++||-+| +|++|..++.+|++. +.+|++++.+ +++.+.+++. |. +.+ .....+..+.+... ...
T Consensus 159 ~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~---Ga~Vi~~~~~-~~~~~~~~~~--Ga-~~~~~~~~~~~~~~~~~~~~~g 231 (362)
T 2c0c_A 159 GGLSEGKKVLVTAAAGGTGQFAMQLSKKA---KCHVIGTCSS-DEKSAFLKSL--GC-DRPINYKTEPVGTVLKQEYPEG 231 (362)
T ss_dssp TCCCTTCEEEETTTTBTTHHHHHHHHHHT---TCEEEEEESS-HHHHHHHHHT--TC-SEEEETTTSCHHHHHHHHCTTC
T ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHhC---CCEEEEEECC-HHHHHHHHHc--CC-cEEEecCChhHHHHHHHhcCCC
Confidence 3456678999999 688999999999874 6799999999 8888888763 22 111 11112333333322 246
Q ss_pred ccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 113 ADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 113 ~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
+|+|| |+.- . ..++.+.+. |++ ||.++.-..
T Consensus 232 ~D~vi-d~~g--~---~~~~~~~~~--l~~-~G~iv~~g~ 262 (362)
T 2c0c_A 232 VDVVY-ESVG--G---AMFDLAVDA--LAT-KGRLIVIGF 262 (362)
T ss_dssp EEEEE-ECSC--T---HHHHHHHHH--EEE-EEEEEECCC
T ss_pred CCEEE-ECCC--H---HHHHHHHHH--Hhc-CCEEEEEeC
Confidence 99987 4443 2 466777777 765 777776543
No 325
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.32 E-value=0.012 Score=52.27 Aligned_cols=105 Identities=10% Similarity=0.005 Sum_probs=67.6
Q ss_pred hhCCCCEEEEEcCCchHHHHHHHHHHcCCCCc-EEEEEeCCchhHHHHHHHHhcccCCcEEEEEcc-hhhhhhhc--CCC
Q 042616 37 AGNNAQLIVMACSSIAVSRTLALVAAARQTGG-RVVCILSGVIGDIDASKKSLGRYANCIEFVKGD-AQKLLMGD--YRG 112 (220)
Q Consensus 37 ~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~g-rV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gd-a~~~L~~~--~~~ 112 (220)
...+.++||.+|+|++|..++.||+++ +. +|++++.+ +++++.+++. |. +.|.....+ ..+.+..+ ...
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlAk~~---Ga~~Vi~~~~~-~~~~~~a~~l--Ga-~~i~~~~~~~~~~~v~~~t~g~g 254 (398)
T 1kol_A 182 GVGPGSTVYVAGAGPVGLAAAASARLL---GAAVVIVGDLN-PARLAHAKAQ--GF-EIADLSLDTPLHEQIAALLGEPE 254 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHT---TCSEEEEEESC-HHHHHHHHHT--TC-EEEETTSSSCHHHHHHHHHSSSC
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHC---CCCeEEEEcCC-HHHHHHHHHc--CC-cEEccCCcchHHHHHHHHhCCCC
Confidence 445678999999988999999999975 44 89999999 9999988764 32 211111112 23333232 247
Q ss_pred ccEEEEcCCCCCcc------------HHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 113 ADFVLIDCNIDIDG------------HKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 113 ~D~VfiD~~k~~~~------------y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
+|+||--... .. ....++.+.+. |++ ||.++.-...
T Consensus 255 ~Dvvid~~G~--~~~~~~~~~~~~~~~~~~~~~~~~~--l~~-~G~iv~~G~~ 302 (398)
T 1kol_A 255 VDCAVDAVGF--EARGHGHEGAKHEAPATVLNSLMQV--TRV-AGKIGIPGLY 302 (398)
T ss_dssp EEEEEECCCT--TCBCSSTTGGGSBCTTHHHHHHHHH--EEE-EEEEEECSCC
T ss_pred CCEEEECCCC--cccccccccccccchHHHHHHHHHH--Hhc-CCEEEEeccc
Confidence 9998744333 21 12467777777 765 8887765443
No 326
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=96.31 E-value=0.012 Score=51.12 Aligned_cols=102 Identities=17% Similarity=0.147 Sum_probs=65.8
Q ss_pred hhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCc-EEEEEcchhhhhhhcCCCccE
Q 042616 37 AGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANC-IEFVKGDAQKLLMGDYRGADF 115 (220)
Q Consensus 37 ~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~-Ve~v~gda~~~L~~~~~~~D~ 115 (220)
...+.++||-+|+|++|..++.+|++. +.+|++++.+ ++..+.+++. |. +. +.....+..+.+....+.+|+
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~---Ga~Vi~~~~~-~~~~~~~~~l--Ga-~~~~d~~~~~~~~~~~~~~~~~d~ 233 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAM---GLNVVAVDIG-DEKLELAKEL--GA-DLVVNPLKEDAAKFMKEKVGGVHA 233 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHT---TCEEEEECSC-HHHHHHHHHT--TC-SEEECTTTSCHHHHHHHHHSSEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc---CCEEEEEeCC-HHHHHHHHHC--CC-CEEecCCCccHHHHHHHHhCCCCE
Confidence 345678999999988999999999874 6799999999 9988888752 22 11 111112322222221257998
Q ss_pred EEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 116 VLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 116 VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
||--... ...++.+.+. |++ ||.++.-...
T Consensus 234 vid~~g~-----~~~~~~~~~~--l~~-~G~~v~~g~~ 263 (339)
T 1rjw_A 234 AVVTAVS-----KPAFQSAYNS--IRR-GGACVLVGLP 263 (339)
T ss_dssp EEESSCC-----HHHHHHHHHH--EEE-EEEEEECCCC
T ss_pred EEECCCC-----HHHHHHHHHH--hhc-CCEEEEeccc
Confidence 8744332 3456777777 765 7877765443
No 327
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.22 E-value=0.031 Score=49.06 Aligned_cols=97 Identities=12% Similarity=0.000 Sum_probs=71.4
Q ss_pred CCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccEEEEcC
Q 042616 41 AQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFVLIDC 120 (220)
Q Consensus 41 a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~VfiD~ 120 (220)
..+++|+.|| +|-.++.+..+- ...|.++|.| +..++..+.|+... . ++|..++.+.....+|+|+.+.
T Consensus 11 ~~~~~dLFaG-~Gg~~~g~~~aG---~~~v~~~e~d-~~a~~t~~~N~~~~---~---~~Di~~~~~~~~~~~D~l~~gp 79 (327)
T 2c7p_A 11 GLRFIDLFAG-LGGFRLALESCG---AECVYSNEWD-KYAQEVYEMNFGEK---P---EGDITQVNEKTIPDHDILCAGF 79 (327)
T ss_dssp TCEEEEETCT-TTHHHHHHHHTT---CEEEEEECCC-HHHHHHHHHHHSCC---C---BSCGGGSCGGGSCCCSEEEEEC
T ss_pred CCcEEEECCC-cCHHHHHHHHCC---CeEEEEEeCC-HHHHHHHHHHcCCC---C---cCCHHHcCHhhCCCCCEEEECC
Confidence 4689999986 898888887752 2357889999 99999999888532 1 6888887655455799999874
Q ss_pred CC---------------CCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 121 NI---------------DIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 121 ~k---------------~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
+- +...+.++++.+... +| -+++..||-
T Consensus 80 PCQ~fS~ag~~~g~~d~r~~L~~~~~r~i~~~---~P--~~~~~ENV~ 122 (327)
T 2c7p_A 80 PCQAFSISGKQKGFEDSRGTLFFDIARIVREK---KP--KVVFMENVK 122 (327)
T ss_dssp CCTTTCTTSCCCGGGSTTSCHHHHHHHHHHHH---CC--SEEEEEEEG
T ss_pred CCCCcchhcccCCCcchhhHHHHHHHHHHHhc---cC--cEEEEeCcH
Confidence 32 113467788888775 45 488888986
No 328
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=96.22 E-value=0.0089 Score=52.97 Aligned_cols=99 Identities=14% Similarity=0.142 Sum_probs=64.7
Q ss_pred hCCCCEEEEEcCCchHHHHHHHHHHcCCCC-cEEEEEeCCchhHHHHHHHHhcccCCcEEEEEc------chhhhhhhcC
Q 042616 38 GNNAQLIVMACSSIAVSRTLALVAAARQTG-GRVVCILSGVIGDIDASKKSLGRYANCIEFVKG------DAQKLLMGDY 110 (220)
Q Consensus 38 ~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~-grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~g------da~~~L~~~~ 110 (220)
..+.++||-+|+|++|..++.||+++ + .+|++++.+ +++.+.+++. |. + .++.- +..+.+.++.
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~---Ga~~Vi~~~~~-~~~~~~~~~l--Ga-~--~vi~~~~~~~~~~~~~v~~~~ 263 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSL---GAENVIVIAGS-PNRLKLAEEI--GA-D--LTLNRRETSVEERRKAIMDIT 263 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHT---TBSEEEEEESC-HHHHHHHHHT--TC-S--EEEETTTSCHHHHHHHHHHHT
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHc---CCceEEEEcCC-HHHHHHHHHc--CC-c--EEEeccccCcchHHHHHHHHh
Confidence 34568999999988999999999875 5 599999999 8988888753 22 2 22222 2222232322
Q ss_pred --CCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 111 --RGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 111 --~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
..+|+||--... . ..++.+.+. |++ ||.++.-...
T Consensus 264 ~g~g~Dvvid~~g~--~---~~~~~~~~~--l~~-~G~iv~~G~~ 300 (380)
T 1vj0_A 264 HGRGADFILEATGD--S---RALLEGSEL--LRR-GGFYSVAGVA 300 (380)
T ss_dssp TTSCEEEEEECSSC--T---THHHHHHHH--EEE-EEEEEECCCC
T ss_pred CCCCCcEEEECCCC--H---HHHHHHHHH--Hhc-CCEEEEEecC
Confidence 369998744332 2 345666666 665 7887765443
No 329
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=96.20 E-value=0.0096 Score=51.53 Aligned_cols=103 Identities=19% Similarity=0.209 Sum_probs=65.8
Q ss_pred HhhCCCCEEEEEcC-CchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc-CCCc
Q 042616 36 AAGNNAQLIVMACS-SIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD-YRGA 113 (220)
Q Consensus 36 a~~~~a~~ILEIGt-g~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~-~~~~ 113 (220)
+...+.++||-+|+ |++|..++.++.+. +.+|++++.+ ++..+.+.+.+. ....+.....+..+.+... .+.+
T Consensus 145 ~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~---Ga~Vi~~~~~-~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~ 219 (336)
T 4b7c_A 145 GQPKNGETVVISGAAGAVGSVAGQIARLK---GCRVVGIAGG-AEKCRFLVEELG-FDGAIDYKNEDLAAGLKRECPKGI 219 (336)
T ss_dssp TCCCTTCEEEESSTTSHHHHHHHHHHHHT---TCEEEEEESS-HHHHHHHHHTTC-CSEEEETTTSCHHHHHHHHCTTCE
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEeCC-HHHHHHHHHHcC-CCEEEECCCHHHHHHHHHhcCCCc
Confidence 44566799999997 77888888888764 6799999999 888888744332 2111111112333333222 3579
Q ss_pred cEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 114 DFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 114 D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
|++| |+.- . ..++.+.+. |++ ||.++.-..
T Consensus 220 d~vi-~~~g--~---~~~~~~~~~--l~~-~G~iv~~G~ 249 (336)
T 4b7c_A 220 DVFF-DNVG--G---EILDTVLTR--IAF-KARIVLCGA 249 (336)
T ss_dssp EEEE-ESSC--H---HHHHHHHTT--EEE-EEEEEECCC
T ss_pred eEEE-ECCC--c---chHHHHHHH--Hhh-CCEEEEEee
Confidence 9876 4433 2 467778887 765 888776543
No 330
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=96.20 E-value=0.011 Score=51.90 Aligned_cols=101 Identities=11% Similarity=0.054 Sum_probs=64.5
Q ss_pred hhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchh-hhhhhcCCCccE
Q 042616 37 AGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQ-KLLMGDYRGADF 115 (220)
Q Consensus 37 ~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~-~~L~~~~~~~D~ 115 (220)
...+.++||.+|+|++|..++.+|++. +.+|++++.+ +++.+.+++. |. + .++.-+.. +....+.+.+|+
T Consensus 176 ~~~~g~~VlV~GaG~vG~~~~qlak~~---Ga~Vi~~~~~-~~~~~~~~~l--Ga-~--~v~~~~~~~~~~~~~~~~~D~ 246 (360)
T 1piw_A 176 GCGPGKKVGIVGLGGIGSMGTLISKAM---GAETYVISRS-SRKREDAMKM--GA-D--HYIATLEEGDWGEKYFDTFDL 246 (360)
T ss_dssp TCSTTCEEEEECCSHHHHHHHHHHHHH---TCEEEEEESS-STTHHHHHHH--TC-S--EEEEGGGTSCHHHHSCSCEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC---CCEEEEEcCC-HHHHHHHHHc--CC-C--EEEcCcCchHHHHHhhcCCCE
Confidence 345678999999988999999999875 5689999999 8888888763 22 2 12222112 222222357999
Q ss_pred EEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 116 VLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 116 VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
|| |+.- ......++.+.+. |++ ||.++.-..
T Consensus 247 vi-d~~g--~~~~~~~~~~~~~--l~~-~G~iv~~g~ 277 (360)
T 1piw_A 247 IV-VCAS--SLTDIDFNIMPKA--MKV-GGRIVSISI 277 (360)
T ss_dssp EE-ECCS--CSTTCCTTTGGGG--EEE-EEEEEECCC
T ss_pred EE-ECCC--CCcHHHHHHHHHH--hcC-CCEEEEecC
Confidence 87 4433 1001234555666 665 788776543
No 331
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=96.14 E-value=0.012 Score=51.33 Aligned_cols=97 Identities=11% Similarity=0.135 Sum_probs=63.1
Q ss_pred hCCCCEEEEEcC-CchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCc-EEEEEcchhhhhhhcC--CCc
Q 042616 38 GNNAQLIVMACS-SIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANC-IEFVKGDAQKLLMGDY--RGA 113 (220)
Q Consensus 38 ~~~a~~ILEIGt-g~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~-Ve~v~gda~~~L~~~~--~~~ 113 (220)
..+.++||-+|+ |++|..++.+|++. +.+|++++.+ ++..+.+++. |. +. +... .+..+.+.... ..+
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~---Ga~Vi~~~~~-~~~~~~~~~~--ga-~~v~~~~-~~~~~~v~~~~~~~g~ 228 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGM---GAKVIAVVNR-TAATEFVKSV--GA-DIVLPLE-EGWAKAVREATGGAGV 228 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT---TCEEEEEESS-GGGHHHHHHH--TC-SEEEESS-TTHHHHHHHHTTTSCE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc---CCEEEEEeCC-HHHHHHHHhc--CC-cEEecCc-hhHHHHHHHHhCCCCc
Confidence 345789999997 78899998888875 6799999999 8888888874 22 22 1111 33333333322 369
Q ss_pred cEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEec
Q 042616 114 DFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYN 151 (220)
Q Consensus 114 D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dN 151 (220)
|++|--... . .++.+.+. |++ ||.++.-.
T Consensus 229 Dvvid~~g~--~----~~~~~~~~--l~~-~G~iv~~G 257 (342)
T 4eye_A 229 DMVVDPIGG--P----AFDDAVRT--LAS-EGRLLVVG 257 (342)
T ss_dssp EEEEESCC--------CHHHHHHT--EEE-EEEEEEC-
T ss_pred eEEEECCch--h----HHHHHHHh--hcC-CCEEEEEE
Confidence 988754443 2 45666666 665 78777654
No 332
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=96.13 E-value=0.023 Score=48.45 Aligned_cols=94 Identities=12% Similarity=0.029 Sum_probs=62.5
Q ss_pred hCCCCEEEEEcC-CchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcch-hhhhhhcCCCccE
Q 042616 38 GNNAQLIVMACS-SIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDA-QKLLMGDYRGADF 115 (220)
Q Consensus 38 ~~~a~~ILEIGt-g~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda-~~~L~~~~~~~D~ 115 (220)
..+.++||-+|+ |++|..++.+|++. +.+|++++.+ +++.+.+++. |. +. ++.-+- .+....+ ..+|+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~---Ga~Vi~~~~~-~~~~~~~~~~--ga-~~--~~~~~~~~~~~~~~-~~~d~ 192 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM---GLRVLAAASR-PEKLALPLAL--GA-EE--AATYAEVPERAKAW-GGLDL 192 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT---TCEEEEEESS-GGGSHHHHHT--TC-SE--EEEGGGHHHHHHHT-TSEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCC-HHHHHHHHhc--CC-CE--EEECCcchhHHHHh-cCceE
Confidence 446789999997 77899988888874 6799999999 8888887653 22 21 222222 3333332 67999
Q ss_pred EEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEec
Q 042616 116 VLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYN 151 (220)
Q Consensus 116 VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dN 151 (220)
+|- ... ..++.+.+. +++ ||.++.-.
T Consensus 193 vid-~g~------~~~~~~~~~--l~~-~G~~v~~g 218 (302)
T 1iz0_A 193 VLE-VRG------KEVEESLGL--LAH-GGRLVYIG 218 (302)
T ss_dssp EEE-CSC------TTHHHHHTT--EEE-EEEEEEC-
T ss_pred EEE-CCH------HHHHHHHHh--hcc-CCEEEEEe
Confidence 886 543 245666776 665 77777643
No 333
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.08 E-value=0.026 Score=49.09 Aligned_cols=94 Identities=10% Similarity=-0.012 Sum_probs=64.4
Q ss_pred hhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccEE
Q 042616 37 AGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFV 116 (220)
Q Consensus 37 ~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~V 116 (220)
...+.++||-+|+|++|..++.+|++. +.+|++++.+ +++.+.+++. |. +.+ + .+..+ + ...+|+|
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~---Ga~Vi~~~~~-~~~~~~~~~l--Ga-~~v--~-~~~~~-~---~~~~D~v 238 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAM---GAEVSVFARN-EHKKQDALSM--GV-KHF--Y-TDPKQ-C---KEELDFI 238 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHT---TCEEEEECSS-STTHHHHHHT--TC-SEE--E-SSGGG-C---CSCEEEE
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHC---CCeEEEEeCC-HHHHHHHHhc--CC-Cee--c-CCHHH-H---hcCCCEE
Confidence 445678999999988999999999875 6799999999 8999888763 22 222 2 34322 2 2389998
Q ss_pred EEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 117 LIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 117 fiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
|--... . ..++.+.+. |++ ||.++.-..
T Consensus 239 id~~g~--~---~~~~~~~~~--l~~-~G~iv~~G~ 266 (348)
T 3two_A 239 ISTIPT--H---YDLKDYLKL--LTY-NGDLALVGL 266 (348)
T ss_dssp EECCCS--C---CCHHHHHTT--EEE-EEEEEECCC
T ss_pred EECCCc--H---HHHHHHHHH--Hhc-CCEEEEECC
Confidence 743333 2 135566666 665 787776544
No 334
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=96.00 E-value=0.027 Score=49.10 Aligned_cols=96 Identities=15% Similarity=0.053 Sum_probs=63.2
Q ss_pred CCCEEEEE-cCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc-CCCccEEE
Q 042616 40 NAQLIVMA-CSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD-YRGADFVL 117 (220)
Q Consensus 40 ~a~~ILEI-Gtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~-~~~~D~Vf 117 (220)
+.++||-+ |+|++|..++.+|++. +.+|++++.+ +++.+.+++.-. +.+--...+..+.+... ...+|+||
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~---Ga~Vi~~~~~-~~~~~~~~~lGa---~~vi~~~~~~~~~~~~~~~~g~Dvv~ 222 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY---GLRVITTASR-NETIEWTKKMGA---DIVLNHKESLLNQFKTQGIELVDYVF 222 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT---TCEEEEECCS-HHHHHHHHHHTC---SEEECTTSCHHHHHHHHTCCCEEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc---CCEEEEEeCC-HHHHHHHHhcCC---cEEEECCccHHHHHHHhCCCCccEEE
Confidence 67899999 5788999999998864 6799999999 999998887421 11100012333333232 35799776
Q ss_pred EcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 118 IDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 118 iD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
|+.- ....++.+.+. |++ ||.+|.-
T Consensus 223 -d~~g----~~~~~~~~~~~--l~~-~G~iv~~ 247 (346)
T 3fbg_A 223 -CTFN----TDMYYDDMIQL--VKP-RGHIATI 247 (346)
T ss_dssp -ESSC----HHHHHHHHHHH--EEE-EEEEEES
T ss_pred -ECCC----chHHHHHHHHH--hcc-CCEEEEE
Confidence 4433 34556777777 765 7877653
No 335
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=95.96 E-value=0.014 Score=50.37 Aligned_cols=101 Identities=12% Similarity=0.093 Sum_probs=63.1
Q ss_pred hhCCCCEEEEEcC-CchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEE-cchhhhhhhc-CCCc
Q 042616 37 AGNNAQLIVMACS-SIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVK-GDAQKLLMGD-YRGA 113 (220)
Q Consensus 37 ~~~~a~~ILEIGt-g~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~-gda~~~L~~~-~~~~ 113 (220)
...+.++||.+|+ |++|..++.++.+. +.+|++++.+ ++..+.+++. +....+.... .+..+.+... .+.+
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~---G~~V~~~~~~-~~~~~~~~~~--g~~~~~d~~~~~~~~~~~~~~~~~~~ 215 (333)
T 1v3u_A 142 GVKGGETVLVSAAAGAVGSVVGQIAKLK---GCKVVGAAGS-DEKIAYLKQI--GFDAAFNYKTVNSLEEALKKASPDGY 215 (333)
T ss_dssp CCCSSCEEEEESTTBHHHHHHHHHHHHT---TCEEEEEESS-HHHHHHHHHT--TCSEEEETTSCSCHHHHHHHHCTTCE
T ss_pred CCCCCCEEEEecCCCcHHHHHHHHHHHC---CCEEEEEeCC-HHHHHHHHhc--CCcEEEecCCHHHHHHHHHHHhCCCC
Confidence 3455789999996 67888888777653 6799999999 8888877443 2211111111 2333333322 2479
Q ss_pred cEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 114 DFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 114 D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
|++|--+.. ..++.+.+. |++ ||.++.-..
T Consensus 216 d~vi~~~g~------~~~~~~~~~--l~~-~G~~v~~g~ 245 (333)
T 1v3u_A 216 DCYFDNVGG------EFLNTVLSQ--MKD-FGKIAICGA 245 (333)
T ss_dssp EEEEESSCH------HHHHHHHTT--EEE-EEEEEECCC
T ss_pred eEEEECCCh------HHHHHHHHH--Hhc-CCEEEEEec
Confidence 988744432 346777777 765 887776543
No 336
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=95.95 E-value=0.024 Score=49.57 Aligned_cols=96 Identities=11% Similarity=0.034 Sum_probs=61.9
Q ss_pred CEEEEEcCCchHHHH-HHHH-HHcCCCCcE-EEEEeCCchh---HHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccE
Q 042616 42 QLIVMACSSIAVSRT-LALV-AAARQTGGR-VVCILSGVIG---DIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADF 115 (220)
Q Consensus 42 ~~ILEIGtg~~G~sT-l~LA-~A~~~~~gr-V~tIE~d~~~---~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~ 115 (220)
++||-+|+|++|..+ +.+| +++ +.+ |++++.+ ++ +.+.+++. |. +.+.....|..+ +..+.+.+|+
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~---Ga~~Vi~~~~~-~~~~~~~~~~~~l--Ga-~~v~~~~~~~~~-i~~~~gg~Dv 245 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDK---GYENLYCLGRR-DRPDPTIDIIEEL--DA-TYVDSRQTPVED-VPDVYEQMDF 245 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTT---CCCEEEEEECC-CSSCHHHHHHHHT--TC-EEEETTTSCGGG-HHHHSCCEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHc---CCcEEEEEeCC-cccHHHHHHHHHc--CC-cccCCCccCHHH-HHHhCCCCCE
Confidence 899999998899998 8888 764 555 9999999 88 88888753 22 222111123333 3232237999
Q ss_pred EEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 116 VLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 116 VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
|| |+.- . ...++.+.+. |++ ||.++.-...
T Consensus 246 vi-d~~g--~--~~~~~~~~~~--l~~-~G~iv~~g~~ 275 (357)
T 2b5w_A 246 IY-EATG--F--PKHAIQSVQA--LAP-NGVGALLGVP 275 (357)
T ss_dssp EE-ECSC--C--HHHHHHHHHH--EEE-EEEEEECCCC
T ss_pred EE-ECCC--C--hHHHHHHHHH--Hhc-CCEEEEEeCC
Confidence 87 4433 1 2456777777 765 8887775443
No 337
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=95.81 E-value=0.019 Score=50.02 Aligned_cols=98 Identities=14% Similarity=0.090 Sum_probs=64.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCc-EEEEEeCCchhHHHHHHHHhcccCCcE-EEEEcchhhhhhhc--CCCccE
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGG-RVVCILSGVIGDIDASKKSLGRYANCI-EFVKGDAQKLLMGD--YRGADF 115 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~g-rV~tIE~d~~~~~~~Ar~~l~g~~~~V-e~v~gda~~~L~~~--~~~~D~ 115 (220)
+.++||-+|+|++|..++.+|++. +. +|++++.+ +++.+.+++. |. +.+ .....+..+.+.++ ...+|+
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~---Ga~~Vi~~~~~-~~~~~~~~~~--Ga-~~~~~~~~~~~~~~v~~~~~g~g~D~ 239 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKAS---GAYPVIVSEPS-DFRRELAKKV--GA-DYVINPFEEDVVKEVMDITDGNGVDV 239 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT---TCCSEEEECSC-HHHHHHHHHH--TC-SEEECTTTSCHHHHHHHHTTTSCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc---CCCEEEEECCC-HHHHHHHHHh--CC-CEEECCCCcCHHHHHHHHcCCCCCCE
Confidence 568899999988999999999875 55 89999999 8988888753 22 111 11112333333332 236999
Q ss_pred EEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 116 VLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 116 VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
||--... ...++.+.+. |++ ||.++.-..
T Consensus 240 vid~~g~-----~~~~~~~~~~--l~~-~G~iv~~g~ 268 (348)
T 2d8a_A 240 FLEFSGA-----PKALEQGLQA--VTP-AGRVSLLGL 268 (348)
T ss_dssp EEECSCC-----HHHHHHHHHH--EEE-EEEEEECCC
T ss_pred EEECCCC-----HHHHHHHHHH--Hhc-CCEEEEEcc
Confidence 8743332 3456777777 765 787776543
No 338
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=95.81 E-value=0.013 Score=51.32 Aligned_cols=101 Identities=16% Similarity=0.179 Sum_probs=63.3
Q ss_pred hCCCCEEEEE-cCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc-CCCccE
Q 042616 38 GNNAQLIVMA-CSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD-YRGADF 115 (220)
Q Consensus 38 ~~~a~~ILEI-Gtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~-~~~~D~ 115 (220)
..+.++||-+ |+|++|..++.+|++. +.+|++++.+ +++.+.+++. |....+.....+..+.+... ...+|+
T Consensus 165 ~~~g~~VlV~Gg~g~iG~~~~~~a~~~---Ga~Vi~~~~~-~~~~~~~~~l--Ga~~~~~~~~~~~~~~~~~~~~~g~Dv 238 (353)
T 4dup_A 165 LTEGESVLIHGGTSGIGTTAIQLARAF---GAEVYATAGS-TGKCEACERL--GAKRGINYRSEDFAAVIKAETGQGVDI 238 (353)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT---TCEEEEEESS-HHHHHHHHHH--TCSEEEETTTSCHHHHHHHHHSSCEEE
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHc---CCEEEEEeCC-HHHHHHHHhc--CCCEEEeCCchHHHHHHHHHhCCCceE
Confidence 3457899999 5677898888888764 6799999999 9988888764 22111111112333333222 357998
Q ss_pred EEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 116 VLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 116 VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
+|--... . .++.+.+. |++ ||.++.-...
T Consensus 239 vid~~g~--~----~~~~~~~~--l~~-~G~iv~~g~~ 267 (353)
T 4dup_A 239 ILDMIGA--A----YFERNIAS--LAK-DGCLSIIAFL 267 (353)
T ss_dssp EEESCCG--G----GHHHHHHT--EEE-EEEEEECCCT
T ss_pred EEECCCH--H----HHHHHHHH--hcc-CCEEEEEEec
Confidence 7744333 2 45666666 665 7877765443
No 339
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=95.78 E-value=0.022 Score=49.88 Aligned_cols=97 Identities=13% Similarity=0.043 Sum_probs=62.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccEEEEc
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFVLID 119 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~VfiD 119 (220)
+.++||-+|+|++|..++.+|+++ +.+|++++.+ +++.+.+++.+. . +.+ +..+-.+.+....+.+|+||--
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~---Ga~Vi~~~~~-~~~~~~~~~~lG-a-~~v--i~~~~~~~~~~~~~g~D~vid~ 251 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAM---GHHVTVISSS-NKKREEALQDLG-A-DDY--VIGSDQAKMSELADSLDYVIDT 251 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH---TCEEEEEESS-TTHHHHHHTTSC-C-SCE--EETTCHHHHHHSTTTEEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC---CCeEEEEeCC-hHHHHHHHHHcC-C-cee--eccccHHHHHHhcCCCCEEEEC
Confidence 678999999998999999999875 5799999999 888888774443 2 221 2211123333334579998743
Q ss_pred CCCCCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 120 CNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 120 ~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
... .. .++.+.+. |++ ||.++.-..
T Consensus 252 ~g~--~~---~~~~~~~~--l~~-~G~iv~~G~ 276 (357)
T 2cf5_A 252 VPV--HH---ALEPYLSL--LKL-DGKLILMGV 276 (357)
T ss_dssp CCS--CC---CSHHHHTT--EEE-EEEEEECSC
T ss_pred CCC--hH---HHHHHHHH--hcc-CCEEEEeCC
Confidence 332 21 23445555 655 787776543
No 340
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=95.75 E-value=0.013 Score=50.99 Aligned_cols=102 Identities=13% Similarity=0.012 Sum_probs=62.7
Q ss_pred hhCCCCEEEEEcCC-chHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc--CCCc
Q 042616 37 AGNNAQLIVMACSS-IAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD--YRGA 113 (220)
Q Consensus 37 ~~~~a~~ILEIGtg-~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~--~~~~ 113 (220)
...+.++||-+|+| ++|..++.+|++. +.+|++++.+ ++..+.+++. |....+.....+..+.+... ...+
T Consensus 141 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~---Ga~Vi~~~~~-~~~~~~~~~l--ga~~~~~~~~~~~~~~~~~~~~~~g~ 214 (340)
T 3gms_A 141 NLQRNDVLLVNACGSAIGHLFAQLSQIL---NFRLIAVTRN-NKHTEELLRL--GAAYVIDTSTAPLYETVMELTNGIGA 214 (340)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHH---TCEEEEEESS-STTHHHHHHH--TCSEEEETTTSCHHHHHHHHTTTSCE
T ss_pred ccCCCCEEEEeCCccHHHHHHHHHHHHc---CCEEEEEeCC-HHHHHHHHhC--CCcEEEeCCcccHHHHHHHHhCCCCC
Confidence 34567899999875 6898888888875 6799999999 8888888874 22111111112333333222 2479
Q ss_pred cEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 114 DFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 114 D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
|++| |+.- .. ...+.+ +. |++ ||.++.-...
T Consensus 215 Dvvi-d~~g--~~--~~~~~~-~~--l~~-~G~iv~~G~~ 245 (340)
T 3gms_A 215 DAAI-DSIG--GP--DGNELA-FS--LRP-NGHFLTIGLL 245 (340)
T ss_dssp EEEE-ESSC--HH--HHHHHH-HT--EEE-EEEEEECCCT
T ss_pred cEEE-ECCC--Ch--hHHHHH-HH--hcC-CCEEEEEeec
Confidence 9886 4433 22 223333 55 665 8888876544
No 341
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=95.73 E-value=0.027 Score=49.04 Aligned_cols=96 Identities=16% Similarity=0.153 Sum_probs=62.2
Q ss_pred hCCCCEEEEEc-CCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc--CCCcc
Q 042616 38 GNNAQLIVMAC-SSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD--YRGAD 114 (220)
Q Consensus 38 ~~~a~~ILEIG-tg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~--~~~~D 114 (220)
..+.++||-+| +|++|..++.+|++. +.+|+++ .+ ++..+.+++. |. +.|. ...+..+.+... ...+|
T Consensus 148 ~~~g~~VlV~Ga~g~iG~~~~q~a~~~---Ga~Vi~~-~~-~~~~~~~~~l--Ga-~~i~-~~~~~~~~~~~~~~~~g~D 218 (343)
T 3gaz_A 148 VQDGQTVLIQGGGGGVGHVAIQIALAR---GARVFAT-AR-GSDLEYVRDL--GA-TPID-ASREPEDYAAEHTAGQGFD 218 (343)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEE-EC-HHHHHHHHHH--TS-EEEE-TTSCHHHHHHHHHTTSCEE
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHC---CCEEEEE-eC-HHHHHHHHHc--CC-CEec-cCCCHHHHHHHHhcCCCce
Confidence 34578999999 688999999999874 6799999 78 8888887663 22 1133 222333333222 24799
Q ss_pred EEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEec
Q 042616 115 FVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYN 151 (220)
Q Consensus 115 ~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dN 151 (220)
+|| |+.- . ..++.+.+. |++ ||.+|.-.
T Consensus 219 ~vi-d~~g--~---~~~~~~~~~--l~~-~G~iv~~g 246 (343)
T 3gaz_A 219 LVY-DTLG--G---PVLDASFSA--VKR-FGHVVSCL 246 (343)
T ss_dssp EEE-ESSC--T---HHHHHHHHH--EEE-EEEEEESC
T ss_pred EEE-ECCC--c---HHHHHHHHH--Hhc-CCeEEEEc
Confidence 776 5543 2 456677777 765 77776643
No 342
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=95.67 E-value=0.11 Score=45.56 Aligned_cols=101 Identities=11% Similarity=0.174 Sum_probs=64.0
Q ss_pred CCCCEEEEEcC-CchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc-CCCccEE
Q 042616 39 NNAQLIVMACS-SIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD-YRGADFV 116 (220)
Q Consensus 39 ~~a~~ILEIGt-g~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~-~~~~D~V 116 (220)
.+.++||-+|+ |++|..++.||++. +.+|+++- + +++.+.+++. |...-+.....|..+.+..+ .+.+|++
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~---Ga~Vi~~~-~-~~~~~~~~~l--Ga~~vi~~~~~~~~~~v~~~t~g~~d~v 235 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLS---GYIPIATC-S-PHNFDLAKSR--GAEEVFDYRAPNLAQTIRTYTKNNLRYA 235 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHT---TCEEEEEE-C-GGGHHHHHHT--TCSEEEETTSTTHHHHHHHHTTTCCCEE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHC---CCEEEEEe-C-HHHHHHHHHc--CCcEEEECCCchHHHHHHHHccCCccEE
Confidence 56789999997 67999999999875 67898885 7 7888888764 22111222223433333333 3459998
Q ss_pred EEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 117 LIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 117 fiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
| |+-- ....++.+.+. |.++||.++.-..+
T Consensus 236 ~-d~~g----~~~~~~~~~~~--l~~~~G~iv~~g~~ 265 (371)
T 3gqv_A 236 L-DCIT----NVESTTFCFAA--IGRAGGHYVSLNPF 265 (371)
T ss_dssp E-ESSC----SHHHHHHHHHH--SCTTCEEEEESSCC
T ss_pred E-ECCC----chHHHHHHHHH--hhcCCCEEEEEecC
Confidence 7 4433 23456777776 63248888876543
No 343
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=95.66 E-value=0.016 Score=50.15 Aligned_cols=102 Identities=14% Similarity=0.127 Sum_probs=64.3
Q ss_pred hhCCCCEEEEEcC-CchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEE-cchhhhhhhc-CCCc
Q 042616 37 AGNNAQLIVMACS-SIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVK-GDAQKLLMGD-YRGA 113 (220)
Q Consensus 37 ~~~~a~~ILEIGt-g~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~-gda~~~L~~~-~~~~ 113 (220)
...+.++||.+|+ |++|..++.++.+. +.+|++++.+ ++..+.+++.+. ....+.... .+..+.+... ...+
T Consensus 152 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~---G~~V~~~~~~-~~~~~~~~~~~g-~~~~~d~~~~~~~~~~~~~~~~~~~ 226 (345)
T 2j3h_A 152 SPKEGETVYVSAASGAVGQLVGQLAKMM---GCYVVGSAGS-KEKVDLLKTKFG-FDDAFNYKEESDLTAALKRCFPNGI 226 (345)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT---TCEEEEEESS-HHHHHHHHHTSC-CSEEEETTSCSCSHHHHHHHCTTCE
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCC-HHHHHHHHHHcC-CceEEecCCHHHHHHHHHHHhCCCC
Confidence 3456789999996 77888888888764 6799999999 888888875442 211111111 1233333222 2469
Q ss_pred cEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 114 DFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 114 D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
|++|- +.- . ..++.+.+. |++ ||.++.-..
T Consensus 227 d~vi~-~~g--~---~~~~~~~~~--l~~-~G~~v~~G~ 256 (345)
T 2j3h_A 227 DIYFE-NVG--G---KMLDAVLVN--MNM-HGRIAVCGM 256 (345)
T ss_dssp EEEEE-SSC--H---HHHHHHHTT--EEE-EEEEEECCC
T ss_pred cEEEE-CCC--H---HHHHHHHHH--Hhc-CCEEEEEcc
Confidence 98874 433 2 367777777 765 787776543
No 344
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=95.66 E-value=0.062 Score=47.20 Aligned_cols=97 Identities=13% Similarity=0.070 Sum_probs=62.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccEEEEc
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFVLID 119 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~VfiD 119 (220)
+.++||-+|+|++|..++.+|++. +.+|+.++.+ ++..+.+++.+. . + .++.-+-.+.+..+.+.+|+||--
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~---Ga~Vi~~~~~-~~~~~~~~~~lG-a-~--~v~~~~~~~~~~~~~~~~D~vid~ 258 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAF---GSKVTVISTS-PSKKEEALKNFG-A-D--SFLVSRDQEQMQAAAGTLDGIIDT 258 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT---TCEEEEEESC-GGGHHHHHHTSC-C-S--EEEETTCHHHHHHTTTCEEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC---CCEEEEEeCC-HHHHHHHHHhcC-C-c--eEEeccCHHHHHHhhCCCCEEEEC
Confidence 668999999988999999999875 6799999999 888887775443 2 1 122221123333434579998754
Q ss_pred CCCCCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 120 CNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 120 ~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
... .. .++.+.+. +++ ||.++.-..
T Consensus 259 ~g~--~~---~~~~~~~~--l~~-~G~iv~~g~ 283 (366)
T 1yqd_A 259 VSA--VH---PLLPLFGL--LKS-HGKLILVGA 283 (366)
T ss_dssp CSS--CC---CSHHHHHH--EEE-EEEEEECCC
T ss_pred CCc--HH---HHHHHHHH--Hhc-CCEEEEEcc
Confidence 443 21 12344455 554 777776543
No 345
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=95.63 E-value=0.018 Score=49.79 Aligned_cols=100 Identities=12% Similarity=0.168 Sum_probs=62.4
Q ss_pred hCCCCEEEEEcC-CchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc--CCCcc
Q 042616 38 GNNAQLIVMACS-SIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD--YRGAD 114 (220)
Q Consensus 38 ~~~a~~ILEIGt-g~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~--~~~~D 114 (220)
..+.++||.+|+ |++|..++.++.+. +.+|++++.+ ++..+.+++. +....+.....+..+.+... ...+|
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~---G~~Vi~~~~~-~~~~~~~~~~--g~~~~~d~~~~~~~~~i~~~~~~~~~d 216 (333)
T 1wly_A 143 VKPGDYVLIHAAAGGMGHIMVPWARHL---GATVIGTVST-EEKAETARKL--GCHHTINYSTQDFAEVVREITGGKGVD 216 (333)
T ss_dssp CCTTCEEEETTTTSTTHHHHHHHHHHT---TCEEEEEESS-HHHHHHHHHH--TCSEEEETTTSCHHHHHHHHHTTCCEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHC---CCEEEEEeCC-HHHHHHHHHc--CCCEEEECCCHHHHHHHHHHhCCCCCe
Confidence 345689999994 77999888888764 6799999999 8888888763 22111111112222222222 24699
Q ss_pred EEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 115 FVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 115 ~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
++| |+.- . ..++.+.+. |++ ||.++.-..
T Consensus 217 ~vi-~~~g--~---~~~~~~~~~--l~~-~G~iv~~g~ 245 (333)
T 1wly_A 217 VVY-DSIG--K---DTLQKSLDC--LRP-RGMCAAYGH 245 (333)
T ss_dssp EEE-ECSC--T---TTHHHHHHT--EEE-EEEEEECCC
T ss_pred EEE-ECCc--H---HHHHHHHHh--hcc-CCEEEEEec
Confidence 887 4433 2 345667776 665 787776543
No 346
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=95.62 E-value=0.097 Score=46.02 Aligned_cols=90 Identities=12% Similarity=-0.049 Sum_probs=60.8
Q ss_pred CCEEEEEcC-----CchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccE
Q 042616 41 AQLIVMACS-----SIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADF 115 (220)
Q Consensus 41 a~~ILEIGt-----g~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~ 115 (220)
..+||++|+ .+.|.. .|.+-.+. ++.|+++|.. +-. ...+ .+++||..+... ..+||+
T Consensus 110 gmrVLDLGA~s~kg~APGS~--VLr~~~p~-g~~VVavDL~-~~~---------sda~--~~IqGD~~~~~~--~~k~DL 172 (344)
T 3r24_A 110 NMRVIHFGAGSDKGVAPGTA--VLRQWLPT-GTLLVDSDLN-DFV---------SDAD--STLIGDCATVHT--ANKWDL 172 (344)
T ss_dssp TCEEEEESCCCTTSBCHHHH--HHHHHSCT-TCEEEEEESS-CCB---------CSSS--EEEESCGGGEEE--SSCEEE
T ss_pred CCEEEeCCCCCCCCCCCcHH--HHHHhCCC-CcEEEEeeCc-ccc---------cCCC--eEEEcccccccc--CCCCCE
Confidence 489999995 146763 34444443 6799999999 321 1112 459999876442 478999
Q ss_pred EEEcCCCC------Cc------cHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 116 VLIDCNID------ID------GHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 116 VfiD~~k~------~~------~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
|+-|-... .. .....++.+... |+| ||-+++.
T Consensus 173 VISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~--Lkp-GGsFvVK 216 (344)
T 3r24_A 173 IISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQK--LAL-GGSIAVK 216 (344)
T ss_dssp EEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHH--EEE-EEEEEEE
T ss_pred EEecCCCCcCCccccchhHHHHHHHHHHHHHHHh--CcC-CCEEEEE
Confidence 99996541 11 235567888888 876 8888888
No 347
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=95.61 E-value=0.048 Score=47.38 Aligned_cols=102 Identities=17% Similarity=0.079 Sum_probs=64.2
Q ss_pred hCCCCEEEEEcC-CchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEE-Ecchhhhhhhc-CCCcc
Q 042616 38 GNNAQLIVMACS-SIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFV-KGDAQKLLMGD-YRGAD 114 (220)
Q Consensus 38 ~~~a~~ILEIGt-g~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v-~gda~~~L~~~-~~~~D 114 (220)
..+.++||.+|+ |++|..++.++.+. +.+|+.++.+ ++..+.+++. +....+.+. ..+..+.+... .+.+|
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~---Ga~V~~~~~~-~~~~~~~~~~--g~~~~~d~~~~~~~~~~~~~~~~~~~D 240 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAM---GYRVLGIDGG-EGKEELFRSI--GGEVFIDFTKEKDIVGAVLKATDGGAH 240 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEECS-TTHHHHHHHT--TCCEEEETTTCSCHHHHHHHHHTSCEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC---CCcEEEEcCC-HHHHHHHHHc--CCceEEecCccHhHHHHHHHHhCCCCC
Confidence 345689999997 67888888887764 6799999999 8888877653 221111111 12333333222 23799
Q ss_pred EEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 115 FVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 115 ~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
++|--... ...++.+.+. |++ ||.++.-...
T Consensus 241 ~vi~~~g~-----~~~~~~~~~~--l~~-~G~iv~~g~~ 271 (347)
T 2hcy_A 241 GVINVSVS-----EAAIEASTRY--VRA-NGTTVLVGMP 271 (347)
T ss_dssp EEEECSSC-----HHHHHHHTTS--EEE-EEEEEECCCC
T ss_pred EEEECCCc-----HHHHHHHHHH--Hhc-CCEEEEEeCC
Confidence 98754443 3567777777 765 7887765443
No 348
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=95.60 E-value=0.044 Score=49.37 Aligned_cols=101 Identities=15% Similarity=0.124 Sum_probs=63.6
Q ss_pred hhCCCCEEEEEcC-CchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcc--------------
Q 042616 37 AGNNAQLIVMACS-SIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGD-------------- 101 (220)
Q Consensus 37 ~~~~a~~ILEIGt-g~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gd-------------- 101 (220)
...+.++||-+|+ |++|..++.+|++. +.+|+.++.+ +++.+.+++. |....+.....+
T Consensus 217 ~~~~g~~VlV~GasG~iG~~a~qla~~~---Ga~vi~~~~~-~~~~~~~~~l--Ga~~~i~~~~~~~~~~~~~~~~~~~~ 290 (447)
T 4a0s_A 217 QMKQGDIVLIWGASGGLGSYAIQFVKNG---GGIPVAVVSS-AQKEAAVRAL--GCDLVINRAELGITDDIADDPRRVVE 290 (447)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHT---TCEEEEEESS-HHHHHHHHHT--TCCCEEEHHHHTCCTTGGGCHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHc---CCEEEEEeCC-HHHHHHHHhc--CCCEEEecccccccccccccccccch
Confidence 3456789999996 88999988888874 6799999999 8888888653 221112111111
Q ss_pred -----hhhhhhhcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 102 -----AQKLLMGDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 102 -----a~~~L~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
...+.......+|+|| |+.- . ..++.+.+. +++ ||.+|.-..
T Consensus 291 ~~~~~~~~v~~~~g~g~Dvvi-d~~G--~---~~~~~~~~~--l~~-~G~iv~~G~ 337 (447)
T 4a0s_A 291 TGRKLAKLVVEKAGREPDIVF-EHTG--R---VTFGLSVIV--ARR-GGTVVTCGS 337 (447)
T ss_dssp HHHHHHHHHHHHHSSCCSEEE-ECSC--H---HHHHHHHHH--SCT-TCEEEESCC
T ss_pred hhhHHHHHHHHHhCCCceEEE-ECCC--c---hHHHHHHHH--Hhc-CCEEEEEec
Confidence 1111111135799886 4443 2 356777777 765 777776543
No 349
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=95.45 E-value=0.013 Score=50.59 Aligned_cols=123 Identities=8% Similarity=-0.081 Sum_probs=69.4
Q ss_pred CCChhHHHHHHHHHh--hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEc
Q 042616 23 GKEPDVGEFISALAA--GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKG 100 (220)
Q Consensus 23 ~~~p~~~~~L~~La~--~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~g 100 (220)
...+..-.|+...-+ ..+..+|||+||+ .|-++-.++.-. ..+.+++++.. .......+.. .....++..+.+
T Consensus 55 YrSRaA~KL~ei~ek~~l~~~~~VLDLGaA-PGGWSQvAa~~~--~~~~v~g~dVG-vDl~~~pi~~-~~~g~~ii~~~~ 129 (277)
T 3evf_A 55 AVSRGTAKLRWFHERGYVKLEGRVIDLGCG-RGGWCYYAAAQK--EVSGVKGFTLG-RDGHEKPMNV-QSLGWNIITFKD 129 (277)
T ss_dssp CSSTHHHHHHHHHHTTSSCCCEEEEEETCT-TCHHHHHHHTST--TEEEEEEECCC-CTTCCCCCCC-CBTTGGGEEEEC
T ss_pred ccccHHHHHHHHHHhCCCCCCCEEEEecCC-CCHHHHHHHHhc--CCCcceeEEEe-ccCccccccc-CcCCCCeEEEec
Confidence 566666666655544 3446789999995 898888766431 13577777776 3321000000 111114444555
Q ss_pred chhhhhhhcCCCccEEEEcCCCCCcc-H------HHHHHHHHhhcCCCCCC-EEEEEecCCCC
Q 042616 101 DAQKLLMGDYRGADFVLIDCNIDIDG-H------KNVFRAAKESVMHGSGA-GVIVGYNALPK 155 (220)
Q Consensus 101 da~~~L~~~~~~~D~VfiD~~k~~~~-y------~~~l~~l~~~~~L~~~G-gviv~dNv~~~ 155 (220)
++. ...-..++||+|+.|...+.+. + ..+++.+.+. |+| | |.+|++ ++.+
T Consensus 130 ~~d-v~~l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~--Lkp-G~G~FV~K-Vf~p 187 (277)
T 3evf_A 130 KTD-IHRLEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKW--LAC-GVDNFCVK-VLAP 187 (277)
T ss_dssp SCC-TTTSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHH--HTT-CCSEEEEE-ESCT
T ss_pred cce-ehhcCCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHH--hCC-CCCeEEEE-ecCC
Confidence 542 2211146899999998652111 1 1235666777 776 7 888884 7764
No 350
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=95.42 E-value=0.035 Score=48.44 Aligned_cols=102 Identities=16% Similarity=0.091 Sum_probs=63.8
Q ss_pred hhCCC--CEEEEEcC-CchHHHHHHHHHHcCCCCc-EEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc-CC
Q 042616 37 AGNNA--QLIVMACS-SIAVSRTLALVAAARQTGG-RVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD-YR 111 (220)
Q Consensus 37 ~~~~a--~~ILEIGt-g~~G~sTl~LA~A~~~~~g-rV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~-~~ 111 (220)
...+. ++||-+|+ |++|..++.++.+. +. +|++++.+ ++..+.+++.+. ....+.....+..+.+... .+
T Consensus 155 ~~~~g~~~~vlI~GasggiG~~~~~~a~~~---Ga~~Vi~~~~~-~~~~~~~~~~~g-~~~~~d~~~~~~~~~~~~~~~~ 229 (357)
T 2zb4_A 155 HITAGSNKTMVVSGAAGACGSVAGQIGHFL---GCSRVVGICGT-HEKCILLTSELG-FDAAINYKKDNVAEQLRESCPA 229 (357)
T ss_dssp CCCTTSCCEEEESSTTBHHHHHHHHHHHHT---TCSEEEEEESC-HHHHHHHHHTSC-CSEEEETTTSCHHHHHHHHCTT
T ss_pred CCCCCCccEEEEECCCcHHHHHHHHHHHHC---CCCeEEEEeCC-HHHHHHHHHHcC-CceEEecCchHHHHHHHHhcCC
Confidence 34556 89999997 77888888887763 66 99999999 888888776442 1111111112333333222 23
Q ss_pred CccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 112 GADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 112 ~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
.+|++|- +.- . ..++.+.+. |++ ||.++.-..
T Consensus 230 ~~d~vi~-~~G--~---~~~~~~~~~--l~~-~G~iv~~G~ 261 (357)
T 2zb4_A 230 GVDVYFD-NVG--G---NISDTVISQ--MNE-NSHIILCGQ 261 (357)
T ss_dssp CEEEEEE-SCC--H---HHHHHHHHT--EEE-EEEEEECCC
T ss_pred CCCEEEE-CCC--H---HHHHHHHHH--hcc-CcEEEEECC
Confidence 6998874 433 2 567777777 765 787776543
No 351
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.39 E-value=0.02 Score=49.29 Aligned_cols=100 Identities=9% Similarity=0.084 Sum_probs=62.2
Q ss_pred hCCCCEEEEEc-CCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc--CCCcc
Q 042616 38 GNNAQLIVMAC-SSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD--YRGAD 114 (220)
Q Consensus 38 ~~~a~~ILEIG-tg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~--~~~~D 114 (220)
..+.++||.+| +|++|..++.++.+. +.+|++++.+ ++..+.+++. +....+.....+..+.+... ...+|
T Consensus 138 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~---G~~V~~~~~~-~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~D 211 (327)
T 1qor_A 138 IKPDEQFLFHAAAGGVGLIACQWAKAL---GAKLIGTVGT-AQKAQSALKA--GAWQVINYREEDLVERLKEITGGKKVR 211 (327)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHH---TCEEEEEESS-HHHHHHHHHH--TCSEEEETTTSCHHHHHHHHTTTCCEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc---CCEEEEEeCC-HHHHHHHHHc--CCCEEEECCCccHHHHHHHHhCCCCce
Confidence 34568999999 577888888888764 6799999999 8888888763 21101111112222222222 24699
Q ss_pred EEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 115 FVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 115 ~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
++|--... ..++.+.+. |++ ||.++.-..
T Consensus 212 ~vi~~~g~------~~~~~~~~~--l~~-~G~iv~~g~ 240 (327)
T 1qor_A 212 VVYDSVGR------DTWERSLDC--LQR-RGLMVSFGN 240 (327)
T ss_dssp EEEECSCG------GGHHHHHHT--EEE-EEEEEECCC
T ss_pred EEEECCch------HHHHHHHHH--hcC-CCEEEEEec
Confidence 98754432 345666666 665 787776543
No 352
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.39 E-value=0.069 Score=40.31 Aligned_cols=92 Identities=12% Similarity=0.105 Sum_probs=57.8
Q ss_pred CEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhh--hhhhc-CCCccEEEE
Q 042616 42 QLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQK--LLMGD-YRGADFVLI 118 (220)
Q Consensus 42 ~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~--~L~~~-~~~~D~Vfi 118 (220)
++|+-+|+|..|. .++..+...+-.|+.||.| ++.++.+++ ..+.++.||+.+ .|... ...+|++++
T Consensus 8 ~~viIiG~G~~G~---~la~~L~~~g~~v~vid~~-~~~~~~~~~------~g~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (140)
T 3fwz_A 8 NHALLVGYGRVGS---LLGEKLLASDIPLVVIETS-RTRVDELRE------RGVRAVLGNAANEEIMQLAHLECAKWLIL 77 (140)
T ss_dssp SCEEEECCSHHHH---HHHHHHHHTTCCEEEEESC-HHHHHHHHH------TTCEEEESCTTSHHHHHHTTGGGCSEEEE
T ss_pred CCEEEECcCHHHH---HHHHHHHHCCCCEEEEECC-HHHHHHHHH------cCCCEEECCCCCHHHHHhcCcccCCEEEE
Confidence 5688888655554 4444444446789999999 888877665 236788898753 45433 257899998
Q ss_pred cCCCCCccH-HHHHHHHHhhcCCCCCCEEEEE
Q 042616 119 DCNIDIDGH-KNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 119 D~~k~~~~y-~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
-.+. ... ......++.. .| +..+++
T Consensus 78 ~~~~--~~~n~~~~~~a~~~---~~-~~~iia 103 (140)
T 3fwz_A 78 TIPN--GYEAGEIVASARAK---NP-DIEIIA 103 (140)
T ss_dssp CCSC--HHHHHHHHHHHHHH---CS-SSEEEE
T ss_pred ECCC--hHHHHHHHHHHHHH---CC-CCeEEE
Confidence 7765 322 2234444443 34 445554
No 353
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=95.34 E-value=0.015 Score=50.57 Aligned_cols=97 Identities=7% Similarity=0.040 Sum_probs=63.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCc-EEEEEeCCchhHHHHHHHHhcccCCcE-EEEEcchhhhhhhc-CCCccEE
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGG-RVVCILSGVIGDIDASKKSLGRYANCI-EFVKGDAQKLLMGD-YRGADFV 116 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~g-rV~tIE~d~~~~~~~Ar~~l~g~~~~V-e~v~gda~~~L~~~-~~~~D~V 116 (220)
+.++||-+|+|++|..++.+|++. +. +|++++.+ +++.+.+++. . +.+ .....+..+.+..+ ...+|+|
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~---Ga~~Vi~~~~~-~~~~~~~~~l-a---~~v~~~~~~~~~~~~~~~~~~g~D~v 235 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRAS---GAGPILVSDPN-PYRLAFARPY-A---DRLVNPLEEDLLEVVRRVTGSGVEVL 235 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHT---TCCSEEEECSC-HHHHGGGTTT-C---SEEECTTTSCHHHHHHHHHSSCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc---CCCEEEEECCC-HHHHHHHHHh-H---HhccCcCccCHHHHHHHhcCCCCCEE
Confidence 668899999988999999999875 55 89999999 8888777664 3 111 11112333333221 3579998
Q ss_pred EEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 117 LIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 117 fiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
| |+.- ....++.+.+. |++ ||.++.-..
T Consensus 236 i-d~~g----~~~~~~~~~~~--l~~-~G~iv~~g~ 263 (343)
T 2dq4_A 236 L-EFSG----NEAAIHQGLMA--LIP-GGEARILGI 263 (343)
T ss_dssp E-ECSC----CHHHHHHHHHH--EEE-EEEEEECCC
T ss_pred E-ECCC----CHHHHHHHHHH--Hhc-CCEEEEEec
Confidence 7 4433 23456777777 765 787776544
No 354
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=95.34 E-value=0.021 Score=49.93 Aligned_cols=100 Identities=12% Similarity=0.099 Sum_probs=62.1
Q ss_pred hCCCCEEEEEc-CCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCc-EEEEEcchhhhhhhc--CCCc
Q 042616 38 GNNAQLIVMAC-SSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANC-IEFVKGDAQKLLMGD--YRGA 113 (220)
Q Consensus 38 ~~~a~~ILEIG-tg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~-Ve~v~gda~~~L~~~--~~~~ 113 (220)
..+.++||.+| +|++|..++.++.+. +.+|++++.+ ++..+.+++. +. +. +.....+..+.+... ...+
T Consensus 160 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~---Ga~Vi~~~~~-~~~~~~~~~~--g~-~~~~~~~~~~~~~~~~~~~~~~~~ 232 (354)
T 2j8z_A 160 VQAGDYVLIHAGLSGVGTAAIQLTRMA---GAIPLVTAGS-QKKLQMAEKL--GA-AAGFNYKKEDFSEATLKFTKGAGV 232 (354)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT---TCEEEEEESC-HHHHHHHHHH--TC-SEEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHc---CCEEEEEeCC-HHHHHHHHHc--CC-cEEEecCChHHHHHHHHHhcCCCc
Confidence 34568999998 577888888888763 6799999999 8888888543 22 11 111112222222222 2469
Q ss_pred cEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 114 DFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 114 D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
|++|--... . .++.+.+. |++ ||.++.-...
T Consensus 233 d~vi~~~G~--~----~~~~~~~~--l~~-~G~iv~~G~~ 263 (354)
T 2j8z_A 233 NLILDCIGG--S----YWEKNVNC--LAL-DGRWVLYGLM 263 (354)
T ss_dssp EEEEESSCG--G----GHHHHHHH--EEE-EEEEEECCCT
T ss_pred eEEEECCCc--h----HHHHHHHh--ccC-CCEEEEEecc
Confidence 998755443 2 35556666 665 7887775443
No 355
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=95.33 E-value=0.022 Score=49.52 Aligned_cols=98 Identities=15% Similarity=0.119 Sum_probs=62.1
Q ss_pred CCCCEEEEEcC-CchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcE-EEEEcchhhhhhhc--CCCcc
Q 042616 39 NNAQLIVMACS-SIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCI-EFVKGDAQKLLMGD--YRGAD 114 (220)
Q Consensus 39 ~~a~~ILEIGt-g~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~V-e~v~gda~~~L~~~--~~~~D 114 (220)
.+.++||.+|+ |++|..++.++.+. +.+|++++.+ ++..+.+++. |. +.+ .....+..+.+... ...+|
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~---G~~Vi~~~~~-~~~~~~~~~~--ga-~~~~d~~~~~~~~~~~~~~~~~~~d 237 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLF---GARVIATAGS-EDKLRRAKAL--GA-DETVNYTHPDWPKEVRRLTGGKGAD 237 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHT---TCEEEEEESS-HHHHHHHHHH--TC-SEEEETTSTTHHHHHHHHTTTTCEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCC-HHHHHHHHhc--CC-CEEEcCCcccHHHHHHHHhCCCCce
Confidence 45689999997 77999999888864 6799999999 8888888753 22 211 11112222333222 24799
Q ss_pred EEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 115 FVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 115 ~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
++|--... .. ++.+.+. |++ ||.++.-..
T Consensus 238 ~vi~~~g~--~~----~~~~~~~--l~~-~G~~v~~g~ 266 (343)
T 2eih_A 238 KVVDHTGA--LY----FEGVIKA--TAN-GGRIAIAGA 266 (343)
T ss_dssp EEEESSCS--SS----HHHHHHH--EEE-EEEEEESSC
T ss_pred EEEECCCH--HH----HHHHHHh--hcc-CCEEEEEec
Confidence 98755543 33 4555565 655 777776543
No 356
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=95.29 E-value=0.03 Score=47.99 Aligned_cols=89 Identities=10% Similarity=-0.042 Sum_probs=58.2
Q ss_pred hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccEEE
Q 042616 38 GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFVL 117 (220)
Q Consensus 38 ~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~Vf 117 (220)
..+.++||-+|+|++|..++.||++. +.+|++++ + +++.+.+++. |. + .++ .| .+ .+...+|+||
T Consensus 140 ~~~g~~VlV~GaG~vG~~a~qlak~~---Ga~Vi~~~-~-~~~~~~~~~l--Ga-~--~v~-~d-~~---~v~~g~Dvv~ 204 (315)
T 3goh_A 140 LTKQREVLIVGFGAVNNLLTQMLNNA---GYVVDLVS-A-SLSQALAAKR--GV-R--HLY-RE-PS---QVTQKYFAIF 204 (315)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHH---TCEEEEEC-S-SCCHHHHHHH--TE-E--EEE-SS-GG---GCCSCEEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc---CCEEEEEE-C-hhhHHHHHHc--CC-C--EEE-cC-HH---HhCCCccEEE
Confidence 34578999999988999999999986 56999999 8 8888888774 21 1 122 24 22 2256899876
Q ss_pred EcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 118 IDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 118 iD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
|+-- .. .+..+.+. |++ ||.++.-
T Consensus 205 -d~~g--~~---~~~~~~~~--l~~-~G~~v~~ 228 (315)
T 3goh_A 205 -DAVN--SQ---NAAALVPS--LKA-NGHIICI 228 (315)
T ss_dssp -CC------------TTGGG--EEE-EEEEEEE
T ss_pred -ECCC--ch---hHHHHHHH--hcC-CCEEEEE
Confidence 5543 22 22456666 765 7776664
No 357
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=95.19 E-value=0.026 Score=49.46 Aligned_cols=99 Identities=5% Similarity=-0.043 Sum_probs=61.0
Q ss_pred hCCCCEEEEEcC-CchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc--CCCcc
Q 042616 38 GNNAQLIVMACS-SIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD--YRGAD 114 (220)
Q Consensus 38 ~~~a~~ILEIGt-g~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~--~~~~D 114 (220)
..+.++||.+|+ |++|..++.++.+. +.+|++++.+ ++..+.+++. +....+.....+..+.+... ...+|
T Consensus 168 ~~~g~~vlV~GasggiG~~~~~~a~~~---Ga~Vi~~~~~-~~~~~~~~~~--ga~~~~d~~~~~~~~~~~~~~~~~~~D 241 (351)
T 1yb5_A 168 VKAGESVLVHGASGGVGLAACQIARAY---GLKILGTAGT-EEGQKIVLQN--GAHEVFNHREVNYIDKIKKYVGEKGID 241 (351)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHT---TCEEEEEESS-HHHHHHHHHT--TCSEEEETTSTTHHHHHHHHHCTTCEE
T ss_pred CCCcCEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCC-hhHHHHHHHc--CCCEEEeCCCchHHHHHHHHcCCCCcE
Confidence 345789999996 77888888888764 6799999999 8888877653 22111111112222222222 23799
Q ss_pred EEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEec
Q 042616 115 FVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYN 151 (220)
Q Consensus 115 ~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dN 151 (220)
++|--... ..++.+.+. |++ ||.++.-.
T Consensus 242 ~vi~~~G~------~~~~~~~~~--l~~-~G~iv~~g 269 (351)
T 1yb5_A 242 IIIEMLAN------VNLSKDLSL--LSH-GGRVIVVG 269 (351)
T ss_dssp EEEESCHH------HHHHHHHHH--EEE-EEEEEECC
T ss_pred EEEECCCh------HHHHHHHHh--ccC-CCEEEEEe
Confidence 88643322 245666776 765 78777654
No 358
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=95.09 E-value=0.14 Score=43.98 Aligned_cols=96 Identities=16% Similarity=0.111 Sum_probs=61.0
Q ss_pred HhhCCCCEEEEEc-CCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhh-hhhhcCCCc
Q 042616 36 AAGNNAQLIVMAC-SSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQK-LLMGDYRGA 113 (220)
Q Consensus 36 a~~~~a~~ILEIG-tg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~-~L~~~~~~~ 113 (220)
+...+.++||-+| +|++|..++.+|++. +.+|+++..+ +..+.+++. |. + .++.-+..+ +. .....+
T Consensus 148 ~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~---Ga~vi~~~~~--~~~~~~~~l--Ga-~--~~i~~~~~~~~~-~~~~g~ 216 (321)
T 3tqh_A 148 AEVKQGDVVLIHAGAGGVGHLAIQLAKQK---GTTVITTASK--RNHAFLKAL--GA-E--QCINYHEEDFLL-AISTPV 216 (321)
T ss_dssp TTCCTTCEEEESSTTSHHHHHHHHHHHHT---TCEEEEEECH--HHHHHHHHH--TC-S--EEEETTTSCHHH-HCCSCE
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHc---CCEEEEEecc--chHHHHHHc--CC-C--EEEeCCCcchhh-hhccCC
Confidence 3456779999997 788999999999875 6799998754 556666653 32 1 123322222 22 223579
Q ss_pred cEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEec
Q 042616 114 DFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYN 151 (220)
Q Consensus 114 D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dN 151 (220)
|+|| |+-- . ..++.+.+. |++ ||.++.-.
T Consensus 217 D~v~-d~~g--~---~~~~~~~~~--l~~-~G~iv~~g 245 (321)
T 3tqh_A 217 DAVI-DLVG--G---DVGIQSIDC--LKE-TGCIVSVP 245 (321)
T ss_dssp EEEE-ESSC--H---HHHHHHGGG--EEE-EEEEEECC
T ss_pred CEEE-ECCC--c---HHHHHHHHh--ccC-CCEEEEeC
Confidence 9876 4443 2 223777777 765 88877653
No 359
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=95.08 E-value=0.048 Score=47.38 Aligned_cols=102 Identities=12% Similarity=0.100 Sum_probs=64.5
Q ss_pred hhCCCCEEEEEcCC-chHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCc-EEEEEcchhhhhhhcC--CC
Q 042616 37 AGNNAQLIVMACSS-IAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANC-IEFVKGDAQKLLMGDY--RG 112 (220)
Q Consensus 37 ~~~~a~~ILEIGtg-~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~-Ve~v~gda~~~L~~~~--~~ 112 (220)
...+.+.||.+|+| ++|..++.++.+.. +.+|+.++.+ ++..+.+++. +. +. +.....+..+.+..+. +.
T Consensus 167 ~~~~g~~vlV~Gagg~iG~~~~~~a~~~~--Ga~Vi~~~~~-~~~~~~~~~~--g~-~~~~~~~~~~~~~~~~~~~~~~~ 240 (347)
T 1jvb_A 167 SLDPTKTLLVVGAGGGLGTMAVQIAKAVS--GATIIGVDVR-EEAVEAAKRA--GA-DYVINASMQDPLAEIRRITESKG 240 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHHT--CCEEEEEESS-HHHHHHHHHH--TC-SEEEETTTSCHHHHHHHHTTTSC
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHHHcC--CCeEEEEcCC-HHHHHHHHHh--CC-CEEecCCCccHHHHHHHHhcCCC
Confidence 34567899999986 78888888887651 5699999999 8888888653 22 11 1111122222222222 47
Q ss_pred ccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 113 ADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 113 ~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
+|++|--... ...++.+.+. |++ ||.++.-..
T Consensus 241 ~d~vi~~~g~-----~~~~~~~~~~--l~~-~G~iv~~g~ 272 (347)
T 1jvb_A 241 VDAVIDLNNS-----EKTLSVYPKA--LAK-QGKYVMVGL 272 (347)
T ss_dssp EEEEEESCCC-----HHHHTTGGGG--EEE-EEEEEECCS
T ss_pred ceEEEECCCC-----HHHHHHHHHH--Hhc-CCEEEEECC
Confidence 9998754443 3456777777 765 787776544
No 360
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=95.08 E-value=0.047 Score=43.11 Aligned_cols=82 Identities=11% Similarity=0.003 Sum_probs=50.3
Q ss_pred CchHHHHHH--HHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchh---hhhhhcCCCccEEEEcCCCCC
Q 042616 50 SIAVSRTLA--LVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQ---KLLMGDYRGADFVLIDCNIDI 124 (220)
Q Consensus 50 g~~G~sTl~--LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~---~~L~~~~~~~D~VfiD~~k~~ 124 (220)
|++|-+|+. ||.++...|.+|.-||.| ++.-.. ..+......+.++..+.. +.+..+...||+|++|++.
T Consensus 11 gG~GKTt~a~~la~~la~~g~~vlliD~D-~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~yD~viiD~~~-- 85 (206)
T 4dzz_A 11 GGSGKTTAVINIATALSRSGYNIAVVDTD-PQMSLT--NWSKAGKAAFDVFTAASEKDVYGIRKDLADYDFAIVDGAG-- 85 (206)
T ss_dssp TTSSHHHHHHHHHHHHHHTTCCEEEEECC-TTCHHH--HHHTTSCCSSEEEECCSHHHHHTHHHHTTTSSEEEEECCS--
T ss_pred CCccHHHHHHHHHHHHHHCCCeEEEEECC-CCCCHH--HHHhcCCCCCcEEecCcHHHHHHHHHhcCCCCEEEEECCC--
Confidence 568888775 666666657799999999 765422 222222234666665432 3344445679999999997
Q ss_pred ccHHHHHHHHHhh
Q 042616 125 DGHKNVFRAAKES 137 (220)
Q Consensus 125 ~~y~~~l~~l~~~ 137 (220)
.... ....+...
T Consensus 86 ~~~~-~~~~~l~~ 97 (206)
T 4dzz_A 86 SLSV-ITSAAVMV 97 (206)
T ss_dssp SSSH-HHHHHHHH
T ss_pred CCCH-HHHHHHHH
Confidence 5533 33444443
No 361
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=95.03 E-value=0.13 Score=46.52 Aligned_cols=102 Identities=14% Similarity=0.096 Sum_probs=64.8
Q ss_pred hhCCCCEEEEEcC-CchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEc-----------ch--
Q 042616 37 AGNNAQLIVMACS-SIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKG-----------DA-- 102 (220)
Q Consensus 37 ~~~~a~~ILEIGt-g~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~g-----------da-- 102 (220)
...+.++||-+|+ |++|..++.+|++. +.+|++++.+ +++++.+++.- ....+..... +.
T Consensus 225 ~~~~g~~VlV~GasG~vG~~avqlak~~---Ga~vi~~~~~-~~~~~~~~~lG--a~~vi~~~~~d~~~~~~~~~~~~~~ 298 (456)
T 3krt_A 225 GMKQGDNVLIWGASGGLGSYATQFALAG---GANPICVVSS-PQKAEICRAMG--AEAIIDRNAEGYRFWKDENTQDPKE 298 (456)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHT---TCEEEEEESS-HHHHHHHHHHT--CCEEEETTTTTCCSEEETTEECHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHc---CCeEEEEECC-HHHHHHHHhhC--CcEEEecCcCcccccccccccchHH
Confidence 3456789999997 88999999999875 6799999999 99999887642 1000110000 11
Q ss_pred ----hhhhhhc--CCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 103 ----QKLLMGD--YRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 103 ----~~~L~~~--~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
.+.+..+ ...+|+|| |+.- . ..++.+.+. |++ ||.++.-...
T Consensus 299 ~~~~~~~i~~~t~g~g~Dvvi-d~~G--~---~~~~~~~~~--l~~-~G~iv~~G~~ 346 (456)
T 3krt_A 299 WKRFGKRIRELTGGEDIDIVF-EHPG--R---ETFGASVFV--TRK-GGTITTCAST 346 (456)
T ss_dssp HHHHHHHHHHHHTSCCEEEEE-ECSC--H---HHHHHHHHH--EEE-EEEEEESCCT
T ss_pred HHHHHHHHHHHhCCCCCcEEE-EcCC--c---hhHHHHHHH--hhC-CcEEEEEecC
Confidence 0222222 25799775 5544 2 467777777 765 8888775443
No 362
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=94.93 E-value=0.061 Score=47.30 Aligned_cols=98 Identities=13% Similarity=0.129 Sum_probs=60.2
Q ss_pred hCCCCEEEEEc-CCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCc-EEEEEcchhhhhhhcCCCccE
Q 042616 38 GNNAQLIVMAC-SSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANC-IEFVKGDAQKLLMGDYRGADF 115 (220)
Q Consensus 38 ~~~a~~ILEIG-tg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~-Ve~v~gda~~~L~~~~~~~D~ 115 (220)
..+.++||-+| +|++|..++.+|++. +.+|++++ + +++.+.+++. |. +. +.....+..+.+.. ...+|+
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~---Ga~Vi~~~-~-~~~~~~~~~l--Ga-~~v~~~~~~~~~~~~~~-~~g~D~ 251 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAW---DAHVTAVC-S-QDASELVRKL--GA-DDVIDYKSGSVEEQLKS-LKPFDF 251 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEE-C-GGGHHHHHHT--TC-SEEEETTSSCHHHHHHT-SCCBSE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhC---CCEEEEEe-C-hHHHHHHHHc--CC-CEEEECCchHHHHHHhh-cCCCCE
Confidence 34568999999 688999999998874 67999998 6 6777777543 22 11 11111233333333 257998
Q ss_pred EEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEec
Q 042616 116 VLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYN 151 (220)
Q Consensus 116 VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dN 151 (220)
|| |+.- ..+ ..++.+.+. +++ ||.++.-.
T Consensus 252 vi-d~~g--~~~-~~~~~~~~~--l~~-~G~iv~~g 280 (375)
T 2vn8_A 252 IL-DNVG--GST-ETWAPDFLK--KWS-GATYVTLV 280 (375)
T ss_dssp EE-ESSC--TTH-HHHGGGGBC--SSS-CCEEEESC
T ss_pred EE-ECCC--Chh-hhhHHHHHh--hcC-CcEEEEeC
Confidence 86 4433 222 234566666 765 77777643
No 363
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=94.91 E-value=0.07 Score=44.32 Aligned_cols=40 Identities=18% Similarity=0.127 Sum_probs=28.3
Q ss_pred CCCCEEEEEcC-CchHHHHHH--HHHHcCCCCcEEEEEeCCchhH
Q 042616 39 NNAQLIVMACS-SIAVSRTLA--LVAAARQTGGRVVCILSGVIGD 80 (220)
Q Consensus 39 ~~a~~ILEIGt-g~~G~sTl~--LA~A~~~~~grV~tIE~d~~~~ 80 (220)
.+++.|.-.++ ||+|-+|+. ||.++. .+.+|.-||.| +..
T Consensus 25 ~~~~vI~v~s~kGGvGKTT~a~~LA~~la-~g~~VlliD~D-~~~ 67 (267)
T 3k9g_A 25 KKPKIITIASIKGGVGKSTSAIILATLLS-KNNKVLLIDMD-TQA 67 (267)
T ss_dssp -CCEEEEECCSSSSSCHHHHHHHHHHHHT-TTSCEEEEEEC-TTC
T ss_pred CCCeEEEEEeCCCCchHHHHHHHHHHHHH-CCCCEEEEECC-CCC
Confidence 34555554443 668888875 777777 58899999999 775
No 364
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=94.90 E-value=0.026 Score=47.49 Aligned_cols=54 Identities=7% Similarity=0.039 Sum_probs=39.0
Q ss_pred cEEEEEcchhhhhhhcC-CCccEEEEcCCCCCc---------------cHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 94 CIEFVKGDAQKLLMGDY-RGADFVLIDCNIDID---------------GHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 94 ~Ve~v~gda~~~L~~~~-~~~D~VfiD~~k~~~---------------~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
..++++||+.+.|..+. ++||+||+|++-... ...++++.+.+. |++ ||+|++.
T Consensus 4 ~~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~--Lk~-~g~i~v~ 73 (260)
T 1g60_A 4 INKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDK--LDK-DGSLYIF 73 (260)
T ss_dssp SSSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHH--EEE-EEEEEEE
T ss_pred cCeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHH--hcC-CeEEEEE
Confidence 45789999999987764 689999999985222 124567777787 876 6666554
No 365
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=94.89 E-value=0.12 Score=44.29 Aligned_cols=93 Identities=14% Similarity=-0.002 Sum_probs=61.8
Q ss_pred EEEEEcC-CchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc-CCCccEEEEcC
Q 042616 43 LIVMACS-SIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD-YRGADFVLIDC 120 (220)
Q Consensus 43 ~ILEIGt-g~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~-~~~~D~VfiD~ 120 (220)
.||-+|+ |++|..++.+|++. +.+|++++.+ +++.+.+++. |. +. ++..+-.+.+..+ .+.+|++| |+
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~---Ga~Vi~~~~~-~~~~~~~~~l--Ga-~~--vi~~~~~~~~~~~~~~~~d~v~-d~ 218 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL---GYQVAAVSGR-ESTHGYLKSL--GA-NR--ILSRDEFAESRPLEKQLWAGAI-DT 218 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT---TCCEEEEESC-GGGHHHHHHH--TC-SE--EEEGGGSSCCCSSCCCCEEEEE-ES
T ss_pred eEEEECCCcHHHHHHHHHHHHc---CCEEEEEeCC-HHHHHHHHhc--CC-CE--EEecCCHHHHHhhcCCCccEEE-EC
Confidence 4998996 88999999999875 6799999999 9999988874 22 11 1221111112222 35799764 66
Q ss_pred CCCCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 121 NIDIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 121 ~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
-- . +.++.+.+. |++ ||.++.-...
T Consensus 219 ~g--~---~~~~~~~~~--l~~-~G~iv~~G~~ 243 (324)
T 3nx4_A 219 VG--D---KVLAKVLAQ--MNY-GGCVAACGLA 243 (324)
T ss_dssp SC--H---HHHHHHHHT--EEE-EEEEEECCCT
T ss_pred CC--c---HHHHHHHHH--Hhc-CCEEEEEecC
Confidence 54 2 267888887 765 8887776444
No 366
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.85 E-value=0.048 Score=47.55 Aligned_cols=54 Identities=13% Similarity=0.093 Sum_probs=40.2
Q ss_pred CcEEEEEcchhhhhhhc-CCCccEEEEcCCCCCc---------------cHHHHHHHHHhhcCCCCCCEEEEE
Q 042616 93 NCIEFVKGDAQKLLMGD-YRGADFVLIDCNIDID---------------GHKNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 93 ~~Ve~v~gda~~~L~~~-~~~~D~VfiD~~k~~~---------------~y~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
++.++++||+.+.|+.+ .++||+||+|.+-... ...++++.+.+. |+| ||.+++
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rv--Lk~-~G~i~i 82 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKK--LKP-DGSFVV 82 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHH--EEE-EEEEEE
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHH--CcC-CcEEEE
Confidence 56899999999988765 3689999999986222 245667777887 876 666554
No 367
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=94.82 E-value=0.12 Score=44.92 Aligned_cols=97 Identities=16% Similarity=0.080 Sum_probs=59.9
Q ss_pred CEEEEE-cCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc--CCCccEEEE
Q 042616 42 QLIVMA-CSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD--YRGADFVLI 118 (220)
Q Consensus 42 ~~ILEI-Gtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~--~~~~D~Vfi 118 (220)
+.||-. |+|++|..++.+|++. +.+|++++.+ +++.+.+++. |...-+.....+..+.+..+ ...+|+||
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~---Ga~Vi~~~~~-~~~~~~~~~~--Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vi- 238 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEE---GFRPIVTVRR-DEQIALLKDI--GAAHVLNEKAPDFEATLREVMKAEQPRIFL- 238 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHH---TCEEEEEESC-GGGHHHHHHH--TCSEEEETTSTTHHHHHHHHHHHHCCCEEE-
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeCC-HHHHHHHHHc--CCCEEEECCcHHHHHHHHHHhcCCCCcEEE-
Confidence 566654 7788999999899875 6799999999 8888888763 22111111112333333222 14799876
Q ss_pred cCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 119 DCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 119 D~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
|+.- . ..++.+.+. |++ ||.++.-...
T Consensus 239 d~~g--~---~~~~~~~~~--l~~-~G~iv~~G~~ 265 (349)
T 3pi7_A 239 DAVT--G---PLASAIFNA--MPK-RARWIIYGRL 265 (349)
T ss_dssp ESSC--H---HHHHHHHHH--SCT-TCEEEECCCS
T ss_pred ECCC--C---hhHHHHHhh--hcC-CCEEEEEecc
Confidence 5543 2 234667777 765 7777765443
No 368
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=94.80 E-value=0.1 Score=46.02 Aligned_cols=100 Identities=12% Similarity=0.123 Sum_probs=60.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccEEEE
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFVLI 118 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~Vfi 118 (220)
.++++|+-+|+|++|..++.++.++ |.+|+.+|.+ +++++.+++.... .+..+..+..++. .....+|+|+-
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~---Ga~V~v~dr~-~~r~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~DvVI~ 236 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGL---GAQVQIFDIN-VERLSYLETLFGS---RVELLYSNSAEIE-TAVAEADLLIG 236 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT---TCEEEEEESC-HHHHHHHHHHHGG---GSEEEECCHHHHH-HHHHTCSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC---CCEEEEEeCC-HHHHHHHHHhhCc---eeEeeeCCHHHHH-HHHcCCCEEEE
Confidence 4568999999998898888877764 5699999999 9988888776542 2333333333322 11236899964
Q ss_pred cCCCCCccHHH-HHHHHHhhcCCCCCCEEEEE
Q 042616 119 DCNIDIDGHKN-VFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 119 D~~k~~~~y~~-~l~~l~~~~~L~~~Ggviv~ 149 (220)
-........+. +.+...+. +++ |++|+-
T Consensus 237 ~~~~~~~~~~~li~~~~~~~--~~~-g~~ivd 265 (361)
T 1pjc_A 237 AVLVPGRRAPILVPASLVEQ--MRT-GSVIVD 265 (361)
T ss_dssp CCCCTTSSCCCCBCHHHHTT--SCT-TCEEEE
T ss_pred CCCcCCCCCCeecCHHHHhh--CCC-CCEEEE
Confidence 43321010111 12344455 654 776654
No 369
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=94.72 E-value=0.078 Score=44.55 Aligned_cols=45 Identities=9% Similarity=0.075 Sum_probs=37.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG 89 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~ 89 (220)
.+...|||..|| +|.+++.... .+.+++++|.+ +..++.|+++++
T Consensus 211 ~~~~~vlD~f~G-sGtt~~~a~~----~gr~~ig~e~~-~~~~~~~~~r~~ 255 (260)
T 1g60_A 211 NPNDLVLDCFMG-SGTTAIVAKK----LGRNFIGCDMN-AEYVNQANFVLN 255 (260)
T ss_dssp CTTCEEEESSCT-TCHHHHHHHH----TTCEEEEEESC-HHHHHHHHHHHH
T ss_pred CCCCEEEECCCC-CCHHHHHHHH----cCCeEEEEeCC-HHHHHHHHHHHH
Confidence 567899999986 8887665443 27899999999 999999999986
No 370
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.58 E-value=0.4 Score=37.39 Aligned_cols=94 Identities=12% Similarity=0.095 Sum_probs=56.4
Q ss_pred CCEEEEEcCCchHHHHHHHHHHcCCC-CcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchh--hhhhhc--CCCccE
Q 042616 41 AQLIVMACSSIAVSRTLALVAAARQT-GGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQ--KLLMGD--YRGADF 115 (220)
Q Consensus 41 a~~ILEIGtg~~G~sTl~LA~A~~~~-~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~--~~L~~~--~~~~D~ 115 (220)
.++|+-+|+|..|.. ++..+... +-+|+.+|.+ ++.++.+++. .++++.||+. +.+... ...+|+
T Consensus 39 ~~~v~IiG~G~~G~~---~a~~L~~~~g~~V~vid~~-~~~~~~~~~~------g~~~~~gd~~~~~~l~~~~~~~~ad~ 108 (183)
T 3c85_A 39 HAQVLILGMGRIGTG---AYDELRARYGKISLGIEIR-EEAAQQHRSE------GRNVISGDATDPDFWERILDTGHVKL 108 (183)
T ss_dssp TCSEEEECCSHHHHH---HHHHHHHHHCSCEEEEESC-HHHHHHHHHT------TCCEEECCTTCHHHHHTBCSCCCCCE
T ss_pred CCcEEEECCCHHHHH---HHHHHHhccCCeEEEEECC-HHHHHHHHHC------CCCEEEcCCCCHHHHHhccCCCCCCE
Confidence 357888887655554 44444433 4589999999 8887766542 2556777764 345443 457999
Q ss_pred EEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEE
Q 042616 116 VLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 116 VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
|++-.+. .......+..+... .| ...|++
T Consensus 109 vi~~~~~-~~~~~~~~~~~~~~---~~-~~~ii~ 137 (183)
T 3c85_A 109 VLLAMPH-HQGNQTALEQLQRR---NY-KGQIAA 137 (183)
T ss_dssp EEECCSS-HHHHHHHHHHHHHT---TC-CSEEEE
T ss_pred EEEeCCC-hHHHHHHHHHHHHH---CC-CCEEEE
Confidence 9986554 12223445555554 34 455554
No 371
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.52 E-value=0.46 Score=34.64 Aligned_cols=94 Identities=16% Similarity=0.111 Sum_probs=54.3
Q ss_pred CCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchh--hhhhhc-CCCccEEE
Q 042616 41 AQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQ--KLLMGD-YRGADFVL 117 (220)
Q Consensus 41 a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~--~~L~~~-~~~~D~Vf 117 (220)
..+|+-+|+|..|. .++..+...+-+|+.+|.+ ++.++..++.. .++++.+|.. +.+... ...+|+|+
T Consensus 4 ~m~i~IiG~G~iG~---~~a~~L~~~g~~v~~~d~~-~~~~~~~~~~~-----~~~~~~~d~~~~~~l~~~~~~~~d~vi 74 (140)
T 1lss_A 4 GMYIIIAGIGRVGY---TLAKSLSEKGHDIVLIDID-KDICKKASAEI-----DALVINGDCTKIKTLEDAGIEDADMYI 74 (140)
T ss_dssp -CEEEEECCSHHHH---HHHHHHHHTTCEEEEEESC-HHHHHHHHHHC-----SSEEEESCTTSHHHHHHTTTTTCSEEE
T ss_pred CCEEEEECCCHHHH---HHHHHHHhCCCeEEEEECC-HHHHHHHHHhc-----CcEEEEcCCCCHHHHHHcCcccCCEEE
Confidence 35788888655554 4444444436789999999 87776554432 2456777753 233222 35789999
Q ss_pred EcCCCCCccHHHHHHHHHhhcCCCCCCEEEE
Q 042616 118 IDCNIDIDGHKNVFRAAKESVMHGSGAGVIV 148 (220)
Q Consensus 118 iD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv 148 (220)
+-.+. ......+..+.+. +.+ +.+|+
T Consensus 75 ~~~~~--~~~~~~~~~~~~~--~~~-~~ii~ 100 (140)
T 1lss_A 75 AVTGK--EEVNLMSSLLAKS--YGI-NKTIA 100 (140)
T ss_dssp ECCSC--HHHHHHHHHHHHH--TTC-CCEEE
T ss_pred EeeCC--chHHHHHHHHHHH--cCC-CEEEE
Confidence 98765 3333333334444 433 44443
No 372
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=94.42 E-value=0.35 Score=41.87 Aligned_cols=96 Identities=13% Similarity=0.094 Sum_probs=61.7
Q ss_pred CEEEEEcCCchHHHHHHHHHHcCCCCc--EEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhh-hhhhcCCCccEEEE
Q 042616 42 QLIVMACSSIAVSRTLALVAAARQTGG--RVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQK-LLMGDYRGADFVLI 118 (220)
Q Consensus 42 ~~ILEIGtg~~G~sTl~LA~A~~~~~g--rV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~-~L~~~~~~~D~Vfi 118 (220)
++|.-||+|..|.+ ||.++...+- +|+.+|++ ++.++.+++. |. +.-...+..+ .+ ...|+||+
T Consensus 34 ~kI~IIG~G~mG~s---lA~~l~~~G~~~~V~~~dr~-~~~~~~a~~~--G~---~~~~~~~~~~~~~----~~aDvVil 100 (314)
T 3ggo_A 34 QNVLIVGVGFMGGS---FAKSLRRSGFKGKIYGYDIN-PESISKAVDL--GI---IDEGTTSIAKVED----FSPDFVML 100 (314)
T ss_dssp SEEEEESCSHHHHH---HHHHHHHTTCCSEEEEECSC-HHHHHHHHHT--TS---CSEEESCTTGGGG----GCCSEEEE
T ss_pred CEEEEEeeCHHHHH---HHHHHHhCCCCCEEEEEECC-HHHHHHHHHC--CC---cchhcCCHHHHhh----ccCCEEEE
Confidence 68999998755543 3333322233 89999999 8887776542 32 1122344444 33 45799999
Q ss_pred cCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCCCCC
Q 042616 119 DCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNALPKG 156 (220)
Q Consensus 119 D~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~~~g 156 (220)
-.+. ....++++.+.+. +++ |. +|+|....++
T Consensus 101 avp~--~~~~~vl~~l~~~--l~~-~~-iv~d~~Svk~ 132 (314)
T 3ggo_A 101 SSPV--RTFREIAKKLSYI--LSE-DA-TVTDQGSVKG 132 (314)
T ss_dssp CSCG--GGHHHHHHHHHHH--SCT-TC-EEEECCSCCT
T ss_pred eCCH--HHHHHHHHHHhhc--cCC-Cc-EEEECCCCcH
Confidence 8887 7778899999988 653 65 4566544443
No 373
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=94.41 E-value=0.22 Score=43.13 Aligned_cols=102 Identities=11% Similarity=0.037 Sum_probs=69.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcE---EEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc---CCC
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGR---VVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD---YRG 112 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~gr---V~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~---~~~ 112 (220)
.+.-+++|+-|| +|-.++.|..| |-+ |.++|.| +...+.-+.|+. ...++.+|..++.+.. ...
T Consensus 14 ~~~~~vidLFaG-~GG~~~g~~~a----G~~~~~v~a~E~d-~~a~~ty~~N~~----~~~~~~~DI~~i~~~~i~~~~~ 83 (295)
T 2qrv_A 14 RKPIRVLSLFDG-IATGLLVLKDL----GIQVDRYIASEVC-EDSITVGMVRHQ----GKIMYVGDVRSVTQKHIQEWGP 83 (295)
T ss_dssp CCCEEEEEETCT-TTHHHHHHHHT----TBCEEEEEEECCC-HHHHHHHHHHTT----TCEEEECCGGGCCHHHHHHTCC
T ss_pred CCCCEEEEeCcC-ccHHHHHHHHC----CCccceEEEEECC-HHHHHHHHHhCC----CCceeCCChHHccHHHhcccCC
Confidence 345679999986 88888888775 333 5899999 888777777763 3467788887764321 247
Q ss_pred ccEEEEcCC---------C-------CCccHHHHHHHHHhhcCCCCCCE-----EEEEecCC
Q 042616 113 ADFVLIDCN---------I-------DIDGHKNVFRAAKESVMHGSGAG-----VIVGYNAL 153 (220)
Q Consensus 113 ~D~VfiD~~---------k-------~~~~y~~~l~~l~~~~~L~~~Gg-----viv~dNv~ 153 (220)
+|+++-..+ + +...+.++++.+... +|+.+ +++..||-
T Consensus 84 ~Dll~ggpPCQ~fS~ag~~r~g~~d~r~~L~~~~~rii~~~---~P~~~~~~P~~~l~ENV~ 142 (295)
T 2qrv_A 84 FDLVIGGSPCNDLSIVNPARKGLYEGTGRLFFEFYRLLHDA---RPKEGDDRPFFWLFENVV 142 (295)
T ss_dssp CSEEEECCCCGGGBTTCTTCCTTTSTTTTHHHHHHHHHHHH---SCCTTCCCCCEEEEEEES
T ss_pred cCEEEecCCCccccccCccccccccccchhHHHHHHHHHHh---CcccccCCccEEEEEcCc
Confidence 899986631 1 113457777877764 46422 89999996
No 374
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=94.26 E-value=0.43 Score=38.44 Aligned_cols=74 Identities=8% Similarity=0.108 Sum_probs=52.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcE-EEEEcchhhhhhhcCCCccEEEE
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCI-EFVKGDAQKLLMGDYRGADFVLI 118 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~V-e~v~gda~~~L~~~~~~~D~Vfi 118 (220)
+.++||-+|+ +|.....+++.+.+.+-+|+++..+ ++..+.... ..+ +++.+|..+.+......+|.||.
T Consensus 20 ~~~~ilVtGa--tG~iG~~l~~~L~~~G~~V~~~~R~-~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~D~vi~ 90 (236)
T 3e8x_A 20 QGMRVLVVGA--NGKVARYLLSELKNKGHEPVAMVRN-EEQGPELRE------RGASDIVVANLEEDFSHAFASIDAVVF 90 (236)
T ss_dssp -CCEEEEETT--TSHHHHHHHHHHHHTTCEEEEEESS-GGGHHHHHH------TTCSEEEECCTTSCCGGGGTTCSEEEE
T ss_pred CCCeEEEECC--CChHHHHHHHHHHhCCCeEEEEECC-hHHHHHHHh------CCCceEEEcccHHHHHHHHcCCCEEEE
Confidence 5678999984 5666667777665557899999999 776544332 257 88899886444444568999998
Q ss_pred cCCC
Q 042616 119 DCNI 122 (220)
Q Consensus 119 D~~k 122 (220)
-+..
T Consensus 91 ~ag~ 94 (236)
T 3e8x_A 91 AAGS 94 (236)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 7765
No 375
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=94.26 E-value=0.045 Score=44.51 Aligned_cols=38 Identities=11% Similarity=0.045 Sum_probs=27.6
Q ss_pred CCEEEEEcC-CchHHHHHH--HHHHcCCC-CcEEEEEeCCchh
Q 042616 41 AQLIVMACS-SIAVSRTLA--LVAAARQT-GGRVVCILSGVIG 79 (220)
Q Consensus 41 a~~ILEIGt-g~~G~sTl~--LA~A~~~~-~grV~tIE~d~~~ 79 (220)
++.|.-.++ |++|-+|+. ||.++... +.+|.-||.| +.
T Consensus 4 ~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D-~~ 45 (245)
T 3ea0_A 4 KRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDIS-LP 45 (245)
T ss_dssp CEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECC-TT
T ss_pred CeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECC-CC
Confidence 444444433 568888875 77778776 7899999999 76
No 376
>2oze_A ORF delta'; para, walker type atpases, DNA segregation, PSM19035, plasmid, DNA binding protein; HET: AGS EPE; 1.83A {Streptococcus pyogenes}
Probab=94.22 E-value=0.3 Score=41.09 Aligned_cols=39 Identities=13% Similarity=0.078 Sum_probs=27.5
Q ss_pred CCEEEEEc---CCchHHHHHH--HHHHcCCCCcEEEEEeCCchhH
Q 042616 41 AQLIVMAC---SSIAVSRTLA--LVAAARQTGGRVVCILSGVIGD 80 (220)
Q Consensus 41 a~~ILEIG---tg~~G~sTl~--LA~A~~~~~grV~tIE~d~~~~ 80 (220)
.+.|.-.+ -|++|-+|+. ||.++...|.+|.-||.| ++.
T Consensus 34 ~~~i~v~~~s~KGGvGKTT~a~nLA~~la~~G~rVlliD~D-~q~ 77 (298)
T 2oze_A 34 NEAIVILNNYFKGGVGKSKLSTMFAYLTDKLNLKVLMIDKD-LQA 77 (298)
T ss_dssp CSCEEEEECCSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEC-TTC
T ss_pred CcEEEEEeccCCCCchHHHHHHHHHHHHHhCCCeEEEEeCC-CCC
Confidence 44454454 4668888875 676666557799999999 775
No 377
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=94.20 E-value=0.07 Score=46.63 Aligned_cols=54 Identities=15% Similarity=0.065 Sum_probs=38.4
Q ss_pred CcEEEE-EcchhhhhhhcC-CCccEEEEcCCCCCc--------cH----HHHHHHHHhhcCCCCCCEEEEE
Q 042616 93 NCIEFV-KGDAQKLLMGDY-RGADFVLIDCNIDID--------GH----KNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 93 ~~Ve~v-~gda~~~L~~~~-~~~D~VfiD~~k~~~--------~y----~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
...+++ +||+.+.|..+. ++||+||+|++-... .| .+++..+.+. |++ ||+|++
T Consensus 37 ~~~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rv--Lk~-~G~i~i 104 (319)
T 1eg2_A 37 TTRHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERV--LSP-TGSIAI 104 (319)
T ss_dssp CEEEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHH--EEE-EEEEEE
T ss_pred ccceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHH--cCC-CeEEEE
Confidence 347888 999999987664 589999999985211 23 4556666777 776 666554
No 378
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.16 E-value=0.38 Score=36.64 Aligned_cols=76 Identities=21% Similarity=0.067 Sum_probs=46.5
Q ss_pred hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchh--hhhhhc-CCCcc
Q 042616 38 GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQ--KLLMGD-YRGAD 114 (220)
Q Consensus 38 ~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~--~~L~~~-~~~~D 114 (220)
....++|+-+|+|..|...+. .+...+.+|+.+|.+ ++.++.++. . ..+.++.+|+. +.+... ...+|
T Consensus 16 ~~~~~~v~IiG~G~iG~~la~---~L~~~g~~V~vid~~-~~~~~~~~~---~--~g~~~~~~d~~~~~~l~~~~~~~ad 86 (155)
T 2g1u_A 16 KQKSKYIVIFGCGRLGSLIAN---LASSSGHSVVVVDKN-EYAFHRLNS---E--FSGFTVVGDAAEFETLKECGMEKAD 86 (155)
T ss_dssp -CCCCEEEEECCSHHHHHHHH---HHHHTTCEEEEEESC-GGGGGGSCT---T--CCSEEEESCTTSHHHHHTTTGGGCS
T ss_pred ccCCCcEEEECCCHHHHHHHH---HHHhCCCeEEEEECC-HHHHHHHHh---c--CCCcEEEecCCCHHHHHHcCcccCC
Confidence 345678999997666654443 333336699999999 776654331 1 12456677753 333332 35689
Q ss_pred EEEEcCCC
Q 042616 115 FVLIDCNI 122 (220)
Q Consensus 115 ~VfiD~~k 122 (220)
+||+-.+.
T Consensus 87 ~Vi~~~~~ 94 (155)
T 2g1u_A 87 MVFAFTND 94 (155)
T ss_dssp EEEECSSC
T ss_pred EEEEEeCC
Confidence 99987765
No 379
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=93.98 E-value=0.087 Score=46.14 Aligned_cols=96 Identities=10% Similarity=0.008 Sum_probs=61.3
Q ss_pred CCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCch---hHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccEEE
Q 042616 41 AQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVI---GDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFVL 117 (220)
Q Consensus 41 a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~---~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~Vf 117 (220)
.++||-+|+|++|..++.+|++. +.+|++++.+ + +..+.+++. |. +.+. ..+..+.+......+|+||
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~---Ga~Vi~~~~~-~~~~~~~~~~~~~--ga-~~v~--~~~~~~~~~~~~~~~d~vi 251 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY---GLEVWMANRR-EPTEVEQTVIEET--KT-NYYN--SSNGYDKLKDSVGKFDVII 251 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH---TCEEEEEESS-CCCHHHHHHHHHH--TC-EEEE--CTTCSHHHHHHHCCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhC---CCEEEEEeCC-ccchHHHHHHHHh--CC-ceec--hHHHHHHHHHhCCCCCEEE
Confidence 78999999888898888888875 5699999999 7 777777653 22 2221 1122122211125799987
Q ss_pred EcCCCCCccHHHHH-HHHHhhcCCCCCCEEEEEecCC
Q 042616 118 IDCNIDIDGHKNVF-RAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 118 iD~~k~~~~y~~~l-~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
--... . ..+ +.+.+. +++ ||.+|.-...
T Consensus 252 d~~g~--~---~~~~~~~~~~--l~~-~G~iv~~g~~ 280 (366)
T 2cdc_A 252 DATGA--D---VNILGNVIPL--LGR-NGVLGLFGFS 280 (366)
T ss_dssp ECCCC--C---THHHHHHGGG--EEE-EEEEEECSCC
T ss_pred ECCCC--h---HHHHHHHHHH--Hhc-CCEEEEEecC
Confidence 54443 2 234 667776 665 7877765443
No 380
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=93.94 E-value=0.1 Score=44.74 Aligned_cols=95 Identities=7% Similarity=-0.079 Sum_probs=57.7
Q ss_pred EEEEEcC-CchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc-CCCccEEEEcC
Q 042616 43 LIVMACS-SIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD-YRGADFVLIDC 120 (220)
Q Consensus 43 ~ILEIGt-g~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~-~~~~D~VfiD~ 120 (220)
+||-+|+ |++|..++.+|++. +.+|++++.+ +++.+.+++. |...-+.....+ .+.+..+ ...+|+|| |+
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~---Ga~vi~~~~~-~~~~~~~~~l--Ga~~~i~~~~~~-~~~~~~~~~~~~d~vi-d~ 223 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKR---GYTVEASTGK-AAEHDYLRVL--GAKEVLAREDVM-AERIRPLDKQRWAAAV-DP 223 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT---TCCEEEEESC-TTCHHHHHHT--TCSEEEECC----------CCSCCEEEEE-EC
T ss_pred eEEEecCCCHHHHHHHHHHHHC---CCEEEEEECC-HHHHHHHHHc--CCcEEEecCCcH-HHHHHHhcCCcccEEE-EC
Confidence 7999996 88999999998875 6789999999 8888888763 221111111111 1222222 24699876 55
Q ss_pred CCCCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 121 NIDIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 121 ~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
.- .. .++.+.+. +++ ||.++.-...
T Consensus 224 ~g--~~---~~~~~~~~--l~~-~G~~v~~G~~ 248 (328)
T 1xa0_A 224 VG--GR---TLATVLSR--MRY-GGAVAVSGLT 248 (328)
T ss_dssp ST--TT---THHHHHHT--EEE-EEEEEECSCC
T ss_pred Cc--HH---HHHHHHHh--hcc-CCEEEEEeec
Confidence 43 21 35666666 665 8887765443
No 381
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=93.91 E-value=0.15 Score=45.37 Aligned_cols=100 Identities=15% Similarity=0.103 Sum_probs=60.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccEEEE
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFVLI 118 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~Vfi 118 (220)
.++++|+-+|+|.+|..++.++.++ |.+|+.+|++ ++.++.+++.+.. .+.....+..+ +.......|+|+.
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~~---Ga~V~~~d~~-~~~l~~~~~~~g~---~~~~~~~~~~~-l~~~l~~aDvVi~ 237 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANGM---GATVTVLDIN-IDKLRQLDAEFCG---RIHTRYSSAYE-LEGAVKRADLVIG 237 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT---TCEEEEEESC-HHHHHHHHHHTTT---SSEEEECCHHH-HHHHHHHCSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC---CCEEEEEeCC-HHHHHHHHHhcCC---eeEeccCCHHH-HHHHHcCCCEEEE
Confidence 4678999999988898888777764 5699999999 8888877765531 12222222222 1122236899988
Q ss_pred cCCCCCccHHH-HHHHHHhhcCCCCCCEEEEE
Q 042616 119 DCNIDIDGHKN-VFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 119 D~~k~~~~y~~-~l~~l~~~~~L~~~Ggviv~ 149 (220)
-.......... +.+...+. ++| |++||.
T Consensus 238 ~~~~p~~~t~~li~~~~l~~--mk~-g~~iV~ 266 (377)
T 2vhw_A 238 AVLVPGAKAPKLVSNSLVAH--MKP-GAVLVD 266 (377)
T ss_dssp CCCCTTSCCCCCBCHHHHTT--SCT-TCEEEE
T ss_pred CCCcCCCCCcceecHHHHhc--CCC-CcEEEE
Confidence 44320011111 12444555 554 887764
No 382
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=93.84 E-value=0.2 Score=44.33 Aligned_cols=101 Identities=11% Similarity=0.083 Sum_probs=60.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccEEEE
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFVLI 118 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~Vfi 118 (220)
.++++|+-+|+|.+|..++.++.+. |.+|+.+|.+ ++.++.+++.+. ..+.....+..++ ......+|+|+.
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~~---Ga~V~~~d~~-~~~~~~~~~~~g---~~~~~~~~~~~~l-~~~~~~~DvVi~ 235 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALGM---GAQVTILDVN-HKRLQYLDDVFG---GRVITLTATEANI-KKSVQHADLLIG 235 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT---TCEEEEEESC-HHHHHHHHHHTT---TSEEEEECCHHHH-HHHHHHCSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC---CCEEEEEECC-HHHHHHHHHhcC---ceEEEecCCHHHH-HHHHhCCCEEEE
Confidence 4578999999988888877777654 6699999999 888877765442 2243333333322 222246899976
Q ss_pred cCCCCCccHHH-HHHHHHhhcCCCCCCEEEEEe
Q 042616 119 DCNIDIDGHKN-VFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 119 D~~k~~~~y~~-~l~~l~~~~~L~~~Ggviv~d 150 (220)
-.......... +.+...+. +++ ||+||.-
T Consensus 236 ~~g~~~~~~~~li~~~~l~~--mk~-gg~iV~v 265 (369)
T 2eez_A 236 AVLVPGAKAPKLVTRDMLSL--MKE-GAVIVDV 265 (369)
T ss_dssp CCC-------CCSCHHHHTT--SCT-TCEEEEC
T ss_pred CCCCCccccchhHHHHHHHh--hcC-CCEEEEE
Confidence 55431001111 13455565 654 8876654
No 383
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=93.74 E-value=0.56 Score=42.76 Aligned_cols=103 Identities=16% Similarity=0.148 Sum_probs=65.3
Q ss_pred CEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc-----cc---------CCcEEEEEcchhhhhh
Q 042616 42 QLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG-----RY---------ANCIEFVKGDAQKLLM 107 (220)
Q Consensus 42 ~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~-----g~---------~~~Ve~v~gda~~~L~ 107 (220)
.+|.-||+|..|. .+|..+...+-+|+++|.+ ++.++..++... ++ ..++++ ..|..+.+
T Consensus 3 mkI~VIG~G~vG~---~lA~~La~~G~~V~~~D~~-~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~-t~d~~ea~- 76 (450)
T 3gg2_A 3 LDIAVVGIGYVGL---VSATCFAELGANVRCIDTD-RNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRF-GTEIEQAV- 76 (450)
T ss_dssp CEEEEECCSHHHH---HHHHHHHHTTCEEEEECSC-HHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEE-ESCHHHHG-
T ss_pred CEEEEECcCHHHH---HHHHHHHhcCCEEEEEECC-HHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEE-ECCHHHHH-
Confidence 4688888755554 4444443336689999999 888877665321 11 233443 34555544
Q ss_pred hcCCCccEEEEcCCCCCc--------cHHHHHHHHHhhcCCCCCCEEEEEecCCCCC
Q 042616 108 GDYRGADFVLIDCNIDID--------GHKNVFRAAKESVMHGSGAGVIVGYNALPKG 156 (220)
Q Consensus 108 ~~~~~~D~VfiD~~k~~~--------~y~~~l~~l~~~~~L~~~Ggviv~dNv~~~g 156 (220)
...|+||+--+.+.. .....++.+.+. ++ +|.+||.-....+|
T Consensus 77 ---~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~--l~-~g~iVV~~STv~pg 127 (450)
T 3gg2_A 77 ---PEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRA--MS-RYILIVTKSTVPVG 127 (450)
T ss_dssp ---GGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHH--CC-SCEEEEECSCCCTT
T ss_pred ---hcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhh--CC-CCCEEEEeeeCCCc
Confidence 357999998766111 457778888888 75 48888877666666
No 384
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=93.69 E-value=0.043 Score=46.81 Aligned_cols=121 Identities=9% Similarity=0.012 Sum_probs=77.1
Q ss_pred CCCChhHHHHHHHHHh--hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEE
Q 042616 22 RGKEPDVGEFISALAA--GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEF 97 (220)
Q Consensus 22 ~~~~p~~~~~L~~La~--~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~ 97 (220)
...+.....|+...-+ ..+...|||+||+ .|-++-..+.... ..+|+++|.- +...+.- ..++ |. +.|+|
T Consensus 58 ~yrSRa~~KL~ei~ek~~l~~g~~VvDLGaa-pGGWSq~~a~~~g--~~~V~avdvG-~~ghe~P-~~~~s~gw-n~v~f 131 (267)
T 3p8z_A 58 HAVSRGSAKLQWFVERNMVIPEGRVIDLGCG-RGGWSYYCAGLKK--VTEVRGYTKG-GPGHEEP-VPMSTYGW-NIVKL 131 (267)
T ss_dssp CCSSTHHHHHHHHHHTTSSCCCEEEEEESCT-TSHHHHHHHTSTT--EEEEEEECCC-STTSCCC-CCCCCTTT-TSEEE
T ss_pred CccchHHHHHHHHHHhcCCCCCCEEEEcCCC-CCcHHHHHHHhcC--CCEEEEEecC-CCCccCc-chhhhcCc-CceEE
Confidence 4566666666655544 3556789999995 8888886665322 3579999998 4433211 1122 43 56999
Q ss_pred EEc-chhhhhhhcCCCccEEEEcCCCCCc-------cHHHHHHHHHhhcCCCCCCEEEEEecCCCCC
Q 042616 98 VKG-DAQKLLMGDYRGADFVLIDCNIDID-------GHKNVFRAAKESVMHGSGAGVIVGYNALPKG 156 (220)
Q Consensus 98 v~g-da~~~L~~~~~~~D~VfiD~~k~~~-------~y~~~l~~l~~~~~L~~~Ggviv~dNv~~~g 156 (220)
+.+ |....- . .++|.|+.|-..... ...++|+.+.+- |.+ |.+++ -||.+.
T Consensus 132 k~gvDv~~~~-~--~~~DtllcDIgeSs~~~~vE~~RtlrvLela~~w--L~~-~~fc~--KVl~py 190 (267)
T 3p8z_A 132 MSGKDVFYLP-P--EKCDTLLCDIGESSPSPTVEESRTIRVLKMVEPW--LKN-NQFCI--KVLNPY 190 (267)
T ss_dssp ECSCCGGGCC-C--CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHGGG--CSS-CEEEE--EESCCC
T ss_pred EeccceeecC-C--ccccEEEEecCCCCCChhhhhhHHHHHHHHHHHh--ccc-CCEEE--EEccCC
Confidence 999 875433 2 679999999766222 224467777787 765 54444 377654
No 385
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=93.68 E-value=0.029 Score=48.57 Aligned_cols=120 Identities=11% Similarity=0.001 Sum_probs=68.7
Q ss_pred CCChhHHHHHHHHHh--hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCc-EEEEE
Q 042616 23 GKEPDVGEFISALAA--GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANC-IEFVK 99 (220)
Q Consensus 23 ~~~p~~~~~L~~La~--~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~-Ve~v~ 99 (220)
......-.|+...-+ ..+..+|||+||+ .|.++-..+.-.+ ...|++++.. ......+..+ ..+..+ +.+..
T Consensus 71 YrSRAAfKL~ei~eK~~Lk~~~~VLDLGaA-PGGWsQvAa~~~g--v~sV~GvdvG-~d~~~~pi~~-~~~g~~ii~~~~ 145 (282)
T 3gcz_A 71 AVSRGSAKLRWMEERGYVKPTGIVVDLGCG-RGGWSYYAASLKN--VKKVMAFTLG-VQGHEKPIMR-TTLGWNLIRFKD 145 (282)
T ss_dssp CSSTHHHHHHHHHHTTSCCCCEEEEEETCT-TCHHHHHHHTSTT--EEEEEEECCC-CTTSCCCCCC-CBTTGGGEEEEC
T ss_pred EecHHHHHHHHHHHhcCCCCCCEEEEeCCC-CCHHHHHHHHhcC--CCeeeeEEec-cCcccccccc-ccCCCceEEeeC
Confidence 355555555555443 2456789999995 8988886664221 3578899887 4322212111 111123 44433
Q ss_pred c-chhhhhhhcCCCccEEEEcCCCCCcc-----H--HHHHHHHHhhcCCCCCC--EEEEEecCCC
Q 042616 100 G-DAQKLLMGDYRGADFVLIDCNIDIDG-----H--KNVFRAAKESVMHGSGA--GVIVGYNALP 154 (220)
Q Consensus 100 g-da~~~L~~~~~~~D~VfiD~~k~~~~-----y--~~~l~~l~~~~~L~~~G--gviv~dNv~~ 154 (220)
+ |..+ ++ ..++|+|+-|...+.+. + ...++.+... |+| | |.+|+. ++.
T Consensus 146 ~~dv~~-l~--~~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~--Lk~-g~~G~Fv~K-vF~ 203 (282)
T 3gcz_A 146 KTDVFN-ME--VIPGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQW--LQE-GNYTEFCIK-VLC 203 (282)
T ss_dssp SCCGGG-SC--CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHH--HHH-HCCCEEEEE-ESC
T ss_pred Ccchhh-cC--CCCcCEEEecCccCCCChHHHHHHHHHHHHHHHHH--cCC-CCCCcEEEE-Eec
Confidence 3 3322 22 37899999998763211 1 2345556666 766 7 888886 665
No 386
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=93.58 E-value=0.25 Score=43.09 Aligned_cols=81 Identities=14% Similarity=0.128 Sum_probs=49.9
Q ss_pred CCEEEEEcCCchHHHHHH--HHHHcCCCCcEEEEEeCCchhHHHHHHH---Hhc-ccCCcEEEE-Ecc----h----hhh
Q 042616 41 AQLIVMACSSIAVSRTLA--LVAAARQTGGRVVCILSGVIGDIDASKK---SLG-RYANCIEFV-KGD----A----QKL 105 (220)
Q Consensus 41 a~~ILEIGtg~~G~sTl~--LA~A~~~~~grV~tIE~d~~~~~~~Ar~---~l~-g~~~~Ve~v-~gd----a----~~~ 105 (220)
++.|+-+|.+|+|-||+. ||..+.+.+++|.-++.| .......++ ..+ ....++.++ .+. + .+.
T Consensus 105 ~~vI~ivG~~G~GKTT~~~~LA~~l~~~g~kVllid~D-~~r~~a~~ql~~~~~~~~~~~l~vip~~~~~~~p~~~~~~~ 183 (320)
T 1zu4_A 105 LNIFMLVGVNGTGKTTSLAKMANYYAELGYKVLIAAAD-TFRAGATQQLEEWIKTRLNNKVDLVKANKLNADPASVVFDA 183 (320)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECC-CSCHHHHHHHHHHHTTTSCTTEEEECCSSTTCCHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEeCC-CcchhHHHHHHHHHhccccCCceEEeCCCCCCCHHHHHHHH
Confidence 456777788779998875 666666668999999988 654432211 111 113457777 432 1 121
Q ss_pred hhh-cCCCccEEEEcCCC
Q 042616 106 LMG-DYRGADFVLIDCNI 122 (220)
Q Consensus 106 L~~-~~~~~D~VfiD~~k 122 (220)
+.. ....||+|+||++.
T Consensus 184 l~~~~~~~yD~VIIDTpg 201 (320)
T 1zu4_A 184 IKKAKEQNYDLLLIDTAG 201 (320)
T ss_dssp HHHHHHTTCSEEEEECCC
T ss_pred HHHHHhcCCCEEEEcCCC
Confidence 211 13689999999987
No 387
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=93.56 E-value=0.093 Score=44.98 Aligned_cols=41 Identities=20% Similarity=0.186 Sum_probs=29.5
Q ss_pred CCCCEEEEEcC-CchHHHHHH--HHHHcCCCCcEEEEEeCCchhH
Q 042616 39 NNAQLIVMACS-SIAVSRTLA--LVAAARQTGGRVVCILSGVIGD 80 (220)
Q Consensus 39 ~~a~~ILEIGt-g~~G~sTl~--LA~A~~~~~grV~tIE~d~~~~ 80 (220)
.+++.|+-.++ |+.|-+|+. ||.++.+.+.+|.-||.| +..
T Consensus 90 ~~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D-~~~ 133 (286)
T 3la6_A 90 AQNNVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCD-MRK 133 (286)
T ss_dssp TTCCEEEEEESSSSSSHHHHHHHHHHHHHTTTCCEEEEECC-TTT
T ss_pred CCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEecc-CCC
Confidence 34566666654 557877774 777777767899999999 753
No 388
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=93.54 E-value=0.23 Score=43.69 Aligned_cols=100 Identities=12% Similarity=0.019 Sum_probs=68.2
Q ss_pred CEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcC--CCccEEEEc
Q 042616 42 QLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDY--RGADFVLID 119 (220)
Q Consensus 42 ~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~--~~~D~VfiD 119 (220)
-+++|+-|| +|-.++.|..|--. .-.|.++|.| +.+.+.-+.|+. ...++++|..++.+... ..+|+++..
T Consensus 4 ~~~idLFaG-~GG~~~G~~~aG~~-~~~v~a~e~d-~~a~~ty~~N~~----~~~~~~~DI~~~~~~~~~~~~~D~l~gg 76 (333)
T 4h0n_A 4 HKILELYSG-IGGMHCAWKESGLD-GEIVAAVDIN-TVANSVYKHNFP----ETNLLNRNIQQLTPQVIKKWNVDTILMS 76 (333)
T ss_dssp EEEEEETCT-TTHHHHHHHHHTCS-EEEEEEECCC-HHHHHHHHHHCT----TSCEECCCGGGCCHHHHHHTTCCEEEEC
T ss_pred CEEEEECcC-ccHHHHHHHHcCCC-ceEEEEEeCC-HHHHHHHHHhCC----CCceeccccccCCHHHhccCCCCEEEec
Confidence 468999986 88888988876211 1347899999 888888888874 23456778776543211 368999855
Q ss_pred CCC---------------CCccHHHHHHHHHhhcCCC-CCCEEEEEecCC
Q 042616 120 CNI---------------DIDGHKNVFRAAKESVMHG-SGAGVIVGYNAL 153 (220)
Q Consensus 120 ~~k---------------~~~~y~~~l~~l~~~~~L~-~~Ggviv~dNv~ 153 (220)
.+= ++..+.++++.+... + | -+++..||-
T Consensus 77 pPCQ~fS~ag~~~~~~d~r~~L~~~~~r~i~~~---~~P--~~~vlENV~ 121 (333)
T 4h0n_A 77 PPCQPFTRNGKYLDDNDPRTNSFLYLIGILDQL---DNV--DYILMENVK 121 (333)
T ss_dssp CCCCCSEETTEECCTTCTTSCCHHHHHHHGGGC---TTC--CEEEEEECT
T ss_pred CCCcchhhhhhccCCcCcccccHHHHHHHHHHh---cCC--CEEEEecch
Confidence 431 124567778777664 3 4 688899996
No 389
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=93.47 E-value=0.49 Score=40.66 Aligned_cols=97 Identities=12% Similarity=0.051 Sum_probs=62.0
Q ss_pred CCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc----c--cCC--cEEEEEcchhhhhhhcCCC
Q 042616 41 AQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG----R--YAN--CIEFVKGDAQKLLMGDYRG 112 (220)
Q Consensus 41 a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~----g--~~~--~Ve~v~gda~~~L~~~~~~ 112 (220)
..+|.-||+|..|.. +|..+...+-+|+.++.+ ++.++..++... + ... ++.....+..+.+ ..
T Consensus 4 ~mki~iiG~G~~G~~---~a~~L~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 75 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHA---FAAYLALKGQSVLAWDID-AQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV----KD 75 (359)
T ss_dssp CCEEEEECCSHHHHH---HHHHHHHTTCEEEEECSC-HHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH----TT
T ss_pred cCeEEEECCCHHHHH---HHHHHHhCCCEEEEEeCC-HHHHHHHHhcCCeEEeccccccccccceecCCHHHHH----hc
Confidence 367999998765643 333332225689999999 888777665421 1 100 0112334554544 46
Q ss_pred ccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 113 ADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 113 ~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
+|+||+-.+. ....++++.+.+. +.+ |.+||..
T Consensus 76 ~D~vi~~v~~--~~~~~~~~~l~~~--l~~-~~~vv~~ 108 (359)
T 1bg6_A 76 ADVILIVVPA--IHHASIAANIASY--ISE-GQLIILN 108 (359)
T ss_dssp CSEEEECSCG--GGHHHHHHHHGGG--CCT-TCEEEES
T ss_pred CCEEEEeCCc--hHHHHHHHHHHHh--CCC-CCEEEEc
Confidence 8999998887 6778889988887 754 8877765
No 390
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=93.47 E-value=0.11 Score=44.67 Aligned_cols=93 Identities=9% Similarity=-0.040 Sum_probs=60.7
Q ss_pred EEEEEcC-CchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcc-h-hhhhhhc-CCCccEEEE
Q 042616 43 LIVMACS-SIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGD-A-QKLLMGD-YRGADFVLI 118 (220)
Q Consensus 43 ~ILEIGt-g~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gd-a-~~~L~~~-~~~~D~Vfi 118 (220)
+||-+|+ |++|..++.+|++. +.+|++++.+ +++.+.+++. |. +. ++.-+ . .+.+..+ ...+|++|
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~---Ga~vi~~~~~-~~~~~~~~~l--Ga-~~--v~~~~~~~~~~~~~~~~~~~d~vi- 222 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKR---GYDVVASTGN-REAADYLKQL--GA-SE--VISREDVYDGTLKALSKQQWQGAV- 222 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHH---TCCEEEEESS-SSTHHHHHHH--TC-SE--EEEHHHHCSSCCCSSCCCCEEEEE-
T ss_pred eEEEECCCCHHHHHHHHHHHHC---CCEEEEEeCC-HHHHHHHHHc--CC-cE--EEECCCchHHHHHHhhcCCccEEE-
Confidence 7999996 88999999999875 5689999999 8888888763 22 22 12211 1 1112122 24689876
Q ss_pred cCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 119 DCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 119 D~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
|+.- . +.++.+.+. +++ ||.++.-...
T Consensus 223 d~~g--~---~~~~~~~~~--l~~-~G~iv~~G~~ 249 (330)
T 1tt7_A 223 DPVG--G---KQLASLLSK--IQY-GGSVAVSGLT 249 (330)
T ss_dssp ESCC--T---HHHHHHHTT--EEE-EEEEEECCCS
T ss_pred ECCc--H---HHHHHHHHh--hcC-CCEEEEEecC
Confidence 5544 2 356777777 765 8888776543
No 391
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=93.45 E-value=0.021 Score=48.66 Aligned_cols=43 Identities=21% Similarity=0.048 Sum_probs=30.3
Q ss_pred hhCCCCEEEEEcCCchHHHHHH--HHHHcCCCCcEEEEEeCCchhH
Q 042616 37 AGNNAQLIVMACSSIAVSRTLA--LVAAARQTGGRVVCILSGVIGD 80 (220)
Q Consensus 37 ~~~~a~~ILEIGtg~~G~sTl~--LA~A~~~~~grV~tIE~d~~~~ 80 (220)
...+++.|.-.|-||+|-||+. ||.++...|.+|.-||.| ++.
T Consensus 37 ~~~~~~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D-~~~ 81 (307)
T 3end_A 37 KITGAKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCD-PKH 81 (307)
T ss_dssp ---CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEES-SSC
T ss_pred ccCCceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCC-CCC
Confidence 4445667766677889998876 677666657899999999 743
No 392
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=93.43 E-value=0.55 Score=33.12 Aligned_cols=85 Identities=14% Similarity=0.024 Sum_probs=53.6
Q ss_pred CCEEEEEcCCchHHHHHHHHHHcCCCC-cEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhh--hhhhcCCCccEEE
Q 042616 41 AQLIVMACSSIAVSRTLALVAAARQTG-GRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQK--LLMGDYRGADFVL 117 (220)
Q Consensus 41 a~~ILEIGtg~~G~sTl~LA~A~~~~~-grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~--~L~~~~~~~D~Vf 117 (220)
.++|+-+|+|..|...+. .+...+ -+|+.++.+ ++..+..+. ..++++..|..+ .+......+|+||
T Consensus 5 ~~~v~I~G~G~iG~~~~~---~l~~~g~~~v~~~~r~-~~~~~~~~~------~~~~~~~~d~~~~~~~~~~~~~~d~vi 74 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAA---LLKTSSNYSVTVADHD-LAALAVLNR------MGVATKQVDAKDEAGLAKALGGFDAVI 74 (118)
T ss_dssp CEEEEEECCSHHHHHHHH---HHHHCSSEEEEEEESC-HHHHHHHHT------TTCEEEECCTTCHHHHHHHTTTCSEEE
T ss_pred cCeEEEECCCHHHHHHHH---HHHhCCCceEEEEeCC-HHHHHHHHh------CCCcEEEecCCCHHHHHHHHcCCCEEE
Confidence 367898997656654443 333335 689999999 877765541 245666666542 2333346799999
Q ss_pred EcCCCCCccHHHHHHHHHhh
Q 042616 118 IDCNIDIDGHKNVFRAAKES 137 (220)
Q Consensus 118 iD~~k~~~~y~~~l~~l~~~ 137 (220)
.-.+. .....+.+.+.+.
T Consensus 75 ~~~~~--~~~~~~~~~~~~~ 92 (118)
T 3ic5_A 75 SAAPF--FLTPIIAKAAKAA 92 (118)
T ss_dssp ECSCG--GGHHHHHHHHHHT
T ss_pred ECCCc--hhhHHHHHHHHHh
Confidence 87765 5556666666654
No 393
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=93.39 E-value=0.098 Score=45.64 Aligned_cols=121 Identities=9% Similarity=-0.035 Sum_probs=69.0
Q ss_pred CCCChhHHHHHHHHHh--hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccC-CcEEEE
Q 042616 22 RGKEPDVGEFISALAA--GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYA-NCIEFV 98 (220)
Q Consensus 22 ~~~~p~~~~~L~~La~--~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~-~~Ve~v 98 (220)
.......-.|+...-. ..+.+.|||+||+ .|-++-.+++-.+ ...|+++|.. .......+. ...+. +-+.+.
T Consensus 61 ~yrSRaa~KL~ei~ek~l~~~g~~vlDLGaa-PGgWsqva~~~~g--v~sV~Gvdlg-~~~~~~P~~-~~~~~~~iv~~~ 135 (300)
T 3eld_A 61 ISVSRGAAKIRWLHERGYLRITGRVLDLGCG-RGGWSYYAAAQKE--VMSVKGYTLG-IEGHEKPIH-MQTLGWNIVKFK 135 (300)
T ss_dssp CCSSTTHHHHHHHHHHTSCCCCEEEEEETCT-TCHHHHHHHTSTT--EEEEEEECCC-CTTSCCCCC-CCBTTGGGEEEE
T ss_pred CccchHHHHHHHHHHhCCCCCCCEEEEcCCC-CCHHHHHHHHhcC--CceeeeEEec-ccccccccc-ccccCCceEEee
Confidence 3455555555555443 2346899999985 9999988886321 3578888886 331100000 01111 224443
Q ss_pred Ec-chhhhhhhcCCCccEEEEcCCCCCccH-------HHHHHHHHhhcCCCCCC-EEEEEecCCC
Q 042616 99 KG-DAQKLLMGDYRGADFVLIDCNIDIDGH-------KNVFRAAKESVMHGSGA-GVIVGYNALP 154 (220)
Q Consensus 99 ~g-da~~~L~~~~~~~D~VfiD~~k~~~~y-------~~~l~~l~~~~~L~~~G-gviv~dNv~~ 154 (220)
.+ |... ++ ..++|+|+.|...+.+.. ..+++.+... |+| | |-+|+. +|.
T Consensus 136 ~~~di~~-l~--~~~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~--Lkp-G~G~FV~K-vF~ 193 (300)
T 3eld_A 136 DKSNVFT-MP--TEPSDTLLCDIGESSSNPLVERDRTMKVLENFERW--KHV-NTENFCVK-VLA 193 (300)
T ss_dssp CSCCTTT-SC--CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHH--CCT-TCCEEEEE-ESS
T ss_pred cCceeee-cC--CCCcCEEeecCcCCCCCHHHHHHHHHHHHHHHHHH--hcC-CCCcEEEE-ecc
Confidence 23 2222 11 368999999987632221 3446666777 876 8 888887 554
No 394
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=93.34 E-value=0.44 Score=35.40 Aligned_cols=86 Identities=16% Similarity=0.150 Sum_probs=54.0
Q ss_pred CCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhh--hhhhc-CCCccEEE
Q 042616 41 AQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQK--LLMGD-YRGADFVL 117 (220)
Q Consensus 41 a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~--~L~~~-~~~~D~Vf 117 (220)
.++|+-+|+|..|. .++..+...+-+|+.+|.+ ++.++.+++. .+.++.+|+.+ .+... ...+|+|+
T Consensus 6 ~~~v~I~G~G~iG~---~la~~L~~~g~~V~~id~~-~~~~~~~~~~------~~~~~~gd~~~~~~l~~~~~~~~d~vi 75 (141)
T 3llv_A 6 RYEYIVIGSEAAGV---GLVRELTAAGKKVLAVDKS-KEKIELLEDE------GFDAVIADPTDESFYRSLDLEGVSAVL 75 (141)
T ss_dssp CCSEEEECCSHHHH---HHHHHHHHTTCCEEEEESC-HHHHHHHHHT------TCEEEECCTTCHHHHHHSCCTTCSEEE
T ss_pred CCEEEEECCCHHHH---HHHHHHHHCCCeEEEEECC-HHHHHHHHHC------CCcEEECCCCCHHHHHhCCcccCCEEE
Confidence 35788889754444 4444444446789999999 8887766542 36778888753 44433 35789999
Q ss_pred EcCCCCCccHHHHHHHHHhh
Q 042616 118 IDCNIDIDGHKNVFRAAKES 137 (220)
Q Consensus 118 iD~~k~~~~y~~~l~~l~~~ 137 (220)
+-.+. ...-......++..
T Consensus 76 ~~~~~-~~~n~~~~~~a~~~ 94 (141)
T 3llv_A 76 ITGSD-DEFNLKILKALRSV 94 (141)
T ss_dssp ECCSC-HHHHHHHHHHHHHH
T ss_pred EecCC-HHHHHHHHHHHHHh
Confidence 87664 12223344455544
No 395
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=93.26 E-value=0.13 Score=44.85 Aligned_cols=99 Identities=10% Similarity=0.081 Sum_probs=56.8
Q ss_pred CCC-CEEEEEcC-CchHHHHHHHHHHcCCCCcEEEEEeCCchhH----HHHHHHHhcccCCc-EEEEE---cchhhhhhh
Q 042616 39 NNA-QLIVMACS-SIAVSRTLALVAAARQTGGRVVCILSGVIGD----IDASKKSLGRYANC-IEFVK---GDAQKLLMG 108 (220)
Q Consensus 39 ~~a-~~ILEIGt-g~~G~sTl~LA~A~~~~~grV~tIE~d~~~~----~~~Ar~~l~g~~~~-Ve~v~---gda~~~L~~ 108 (220)
.+. ++||-+|+ |++|..++.+|++. +.+++++..+ ++. .+.+++ + |. +. +.... .+..+.+.+
T Consensus 165 ~~g~~~VlV~Ga~G~vG~~aiqlak~~---Ga~vi~~~~~-~~~~~~~~~~~~~-l-Ga-~~vi~~~~~~~~~~~~~i~~ 237 (364)
T 1gu7_A 165 TPGKDWFIQNGGTSAVGKYASQIGKLL---NFNSISVIRD-RPNLDEVVASLKE-L-GA-TQVITEDQNNSREFGPTIKE 237 (364)
T ss_dssp CTTTCEEEESCTTSHHHHHHHHHHHHH---TCEEEEEECC-CTTHHHHHHHHHH-H-TC-SEEEEHHHHHCGGGHHHHHH
T ss_pred CCCCcEEEECCCCcHHHHHHHHHHHHC---CCEEEEEecC-ccccHHHHHHHHh-c-CC-eEEEecCccchHHHHHHHHH
Confidence 345 89999996 88999999999875 6788888766 443 344432 2 32 22 11111 222223322
Q ss_pred c----CCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 109 D----YRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 109 ~----~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
+ ...+|+|| |+-- . .... .+.+. |++ ||.++.-...
T Consensus 238 ~t~~~~~g~Dvvi-d~~G--~--~~~~-~~~~~--l~~-~G~~v~~g~~ 277 (364)
T 1gu7_A 238 WIKQSGGEAKLAL-NCVG--G--KSST-GIARK--LNN-NGLMLTYGGM 277 (364)
T ss_dssp HHHHHTCCEEEEE-ESSC--H--HHHH-HHHHT--SCT-TCEEEECCCC
T ss_pred HhhccCCCceEEE-ECCC--c--hhHH-HHHHH--hcc-CCEEEEecCC
Confidence 1 24799887 5443 2 2223 45566 765 7777765443
No 396
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=93.14 E-value=0.13 Score=41.99 Aligned_cols=34 Identities=24% Similarity=0.222 Sum_probs=23.9
Q ss_pred EEEEcC-CchHHHHHH--HHHHcCCCCcEEEEEeCCch
Q 042616 44 IVMACS-SIAVSRTLA--LVAAARQTGGRVVCILSGVI 78 (220)
Q Consensus 44 ILEIGt-g~~G~sTl~--LA~A~~~~~grV~tIE~d~~ 78 (220)
|.-.++ |++|-+|+. ||.++...+.+|.-||.| +
T Consensus 5 i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D-~ 41 (260)
T 3q9l_A 5 IVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFA-I 41 (260)
T ss_dssp EEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC-C
T ss_pred EEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECC-C
Confidence 333343 558887775 676666657799999999 7
No 397
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=93.14 E-value=0.54 Score=35.60 Aligned_cols=75 Identities=19% Similarity=0.251 Sum_probs=48.2
Q ss_pred CCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCch-hHHHHHHHHhcccCCcEEEEEcchh--hhhhhc-CCCccEE
Q 042616 41 AQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVI-GDIDASKKSLGRYANCIEFVKGDAQ--KLLMGD-YRGADFV 116 (220)
Q Consensus 41 a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~-~~~~~Ar~~l~g~~~~Ve~v~gda~--~~L~~~-~~~~D~V 116 (220)
.++|+-+|+|.+| ..++..+...+-+|+.||.+ + +.++..+..+. ..++++.||+. +.+... ....|.|
T Consensus 3 ~~~vlI~G~G~vG---~~la~~L~~~g~~V~vid~~-~~~~~~~~~~~~~---~~~~~i~gd~~~~~~l~~a~i~~ad~v 75 (153)
T 1id1_A 3 KDHFIVCGHSILA---INTILQLNQRGQNVTVISNL-PEDDIKQLEQRLG---DNADVIPGDSNDSSVLKKAGIDRCRAI 75 (153)
T ss_dssp CSCEEEECCSHHH---HHHHHHHHHTTCCEEEEECC-CHHHHHHHHHHHC---TTCEEEESCTTSHHHHHHHTTTTCSEE
T ss_pred CCcEEEECCCHHH---HHHHHHHHHCCCCEEEEECC-ChHHHHHHHHhhc---CCCeEEEcCCCCHHHHHHcChhhCCEE
Confidence 4568888865555 44444444436689999997 5 54544444332 34788999985 344332 4678999
Q ss_pred EEcCCC
Q 042616 117 LIDCNI 122 (220)
Q Consensus 117 fiD~~k 122 (220)
++-.+.
T Consensus 76 i~~~~~ 81 (153)
T 1id1_A 76 LALSDN 81 (153)
T ss_dssp EECSSC
T ss_pred EEecCC
Confidence 988765
No 398
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=93.12 E-value=0.71 Score=38.49 Aligned_cols=89 Identities=9% Similarity=0.103 Sum_probs=55.6
Q ss_pred CEEEEEcCCchHHHHHHHHHHcCCCCc--EEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCC-CccEEEE
Q 042616 42 QLIVMACSSIAVSRTLALVAAARQTGG--RVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYR-GADFVLI 118 (220)
Q Consensus 42 ~~ILEIGtg~~G~sTl~LA~A~~~~~g--rV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~-~~D~Vfi 118 (220)
++|.-||+|..|.. ++..+...+- +|+.+|++ ++..+.+++. |... ....+..+.+ . ..|+||+
T Consensus 2 ~~I~iIG~G~mG~~---~a~~l~~~g~~~~V~~~d~~-~~~~~~~~~~--g~~~---~~~~~~~~~~----~~~aDvVil 68 (281)
T 2g5c_A 2 QNVLIVGVGFMGGS---FAKSLRRSGFKGKIYGYDIN-PESISKAVDL--GIID---EGTTSIAKVE----DFSPDFVML 68 (281)
T ss_dssp CEEEEESCSHHHHH---HHHHHHHTTCCSEEEEECSC-HHHHHHHHHT--TSCS---EEESCGGGGG----GTCCSEEEE
T ss_pred cEEEEEecCHHHHH---HHHHHHhcCCCcEEEEEeCC-HHHHHHHHHC--CCcc---cccCCHHHHh----cCCCCEEEE
Confidence 46888998755554 3333332233 79999999 8877766532 3211 1223444433 3 6899999
Q ss_pred cCCCCCccHHHHHHHHHhhcCCCCCCEEEE
Q 042616 119 DCNIDIDGHKNVFRAAKESVMHGSGAGVIV 148 (220)
Q Consensus 119 D~~k~~~~y~~~l~~l~~~~~L~~~Ggviv 148 (220)
-.+. ....++++.+.+. +++ +.+|+
T Consensus 69 avp~--~~~~~v~~~l~~~--l~~-~~iv~ 93 (281)
T 2g5c_A 69 SSPV--RTFREIAKKLSYI--LSE-DATVT 93 (281)
T ss_dssp CSCH--HHHHHHHHHHHHH--SCT-TCEEE
T ss_pred cCCH--HHHHHHHHHHHhh--CCC-CcEEE
Confidence 8877 6667888888887 654 66544
No 399
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=93.10 E-value=0.11 Score=45.28 Aligned_cols=98 Identities=12% Similarity=-0.015 Sum_probs=55.0
Q ss_pred hCCCCEEEEEcC-CchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc-CCCccE
Q 042616 38 GNNAQLIVMACS-SIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD-YRGADF 115 (220)
Q Consensus 38 ~~~a~~ILEIGt-g~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~-~~~~D~ 115 (220)
..+.++||-+|+ |++|..++.||+++. +.+|++++ + ++..+.++ + |...-+. ...+..+.+..+ .+.+|+
T Consensus 140 ~~~g~~VlV~Ga~G~vG~~a~qla~~~g--~~~V~~~~-~-~~~~~~~~--~-ga~~~~~-~~~~~~~~~~~~~~~g~Dv 211 (349)
T 4a27_A 140 LREGMSVLVHSAGGGVGQAVAQLCSTVP--NVTVFGTA-S-TFKHEAIK--D-SVTHLFD-RNADYVQEVKRISAEGVDI 211 (349)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHTTST--TCEEEEEE-C-GGGHHHHG--G-GSSEEEE-TTSCHHHHHHHHCTTCEEE
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcC--CcEEEEeC-C-HHHHHHHH--c-CCcEEEc-CCccHHHHHHHhcCCCceE
Confidence 455789999997 778888888887642 46899888 4 46666665 2 3211122 223333333332 357998
Q ss_pred EEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 116 VLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 116 VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
||--... . .++.+.+. |++ ||.++.-..
T Consensus 212 v~d~~g~--~----~~~~~~~~--l~~-~G~~v~~G~ 239 (349)
T 4a27_A 212 VLDCLCG--D----NTGKGLSL--LKP-LGTYILYGS 239 (349)
T ss_dssp EEEECC-------------CTT--EEE-EEEEEEEC-
T ss_pred EEECCCc--h----hHHHHHHH--hhc-CCEEEEECC
Confidence 7743332 2 23566666 765 777765543
No 400
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=93.09 E-value=0.45 Score=40.79 Aligned_cols=95 Identities=14% Similarity=0.047 Sum_probs=68.0
Q ss_pred EEEEEcCCchHHHHHHHHHHcCCCCc-EEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccEEEEcCC
Q 042616 43 LIVMACSSIAVSRTLALVAAARQTGG-RVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFVLIDCN 121 (220)
Q Consensus 43 ~ILEIGtg~~G~sTl~LA~A~~~~~g-rV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~VfiD~~ 121 (220)
+|||+-|| +|-.++.|-.| |- .|.++|.| +.+.+.-+.|+. -+++.+|..++-+.....+|+++-..+
T Consensus 2 kvidLFsG-~GG~~~G~~~a----G~~~v~a~e~d-~~a~~ty~~N~~-----~~~~~~DI~~i~~~~~~~~D~l~ggpP 70 (331)
T 3ubt_Y 2 NLISLFSG-AGGLDLGFQKA----GFRIICANEYD-KSIWKTYESNHS-----AKLIKGDISKISSDEFPKCDGIIGGPP 70 (331)
T ss_dssp EEEEESCT-TCHHHHHHHHT----TCEEEEEEECC-TTTHHHHHHHCC-----SEEEESCGGGCCGGGSCCCSEEECCCC
T ss_pred eEEEeCcC-ccHHHHHHHHC----CCEEEEEEeCC-HHHHHHHHHHCC-----CCcccCChhhCCHhhCCcccEEEecCC
Confidence 68999986 78888888775 44 45789999 888888888763 256789988865544567898863321
Q ss_pred C---------------CCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 122 I---------------DIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 122 k---------------~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
= ++..+.++++.+... +| -+++..||-
T Consensus 71 CQ~fS~ag~~~g~~d~R~~L~~~~~r~i~~~---~P--k~~~~ENV~ 112 (331)
T 3ubt_Y 71 SQSWSEGGSLRGIDDPRGKLFYEYIRILKQK---KP--IFFLAENVK 112 (331)
T ss_dssp GGGTEETTEECCTTCGGGHHHHHHHHHHHHH---CC--SEEEEEECC
T ss_pred CCCcCCCCCccCCCCchhHHHHHHHHHHhcc---CC--eEEEeeeec
Confidence 0 113567778887775 45 588899995
No 401
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=93.07 E-value=0.6 Score=37.08 Aligned_cols=84 Identities=14% Similarity=0.133 Sum_probs=58.7
Q ss_pred EEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhh---hhhhcCCCccEEEEc
Q 042616 43 LIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQK---LLMGDYRGADFVLID 119 (220)
Q Consensus 43 ~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~---~L~~~~~~~D~VfiD 119 (220)
+||-+|+ +|+....+++.+...+-+|++++.+ ++..+ .+ .+++++.+|..+ .+......+|.||.-
T Consensus 2 ~ilItGa--tG~iG~~l~~~L~~~g~~V~~~~R~-~~~~~-------~~-~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ 70 (219)
T 3dqp_A 2 KIFIVGS--TGRVGKSLLKSLSTTDYQIYAGARK-VEQVP-------QY-NNVKAVHFDVDWTPEEMAKQLHGMDAIINV 70 (219)
T ss_dssp EEEEEST--TSHHHHHHHHHHTTSSCEEEEEESS-GGGSC-------CC-TTEEEEECCTTSCHHHHHTTTTTCSEEEEC
T ss_pred eEEEECC--CCHHHHHHHHHHHHCCCEEEEEECC-ccchh-------hc-CCceEEEecccCCHHHHHHHHcCCCEEEEC
Confidence 5888883 6788888888887767899999999 65322 12 579999999866 344556789999977
Q ss_pred CCCCCc-----c---HHHHHHHHHhh
Q 042616 120 CNIDID-----G---HKNVFRAAKES 137 (220)
Q Consensus 120 ~~k~~~-----~---y~~~l~~l~~~ 137 (220)
+..... + ...+++.+.+.
T Consensus 71 ag~~~~~~~~~n~~~~~~l~~a~~~~ 96 (219)
T 3dqp_A 71 SGSGGKSLLKVDLYGAVKLMQAAEKA 96 (219)
T ss_dssp CCCTTSSCCCCCCHHHHHHHHHHHHT
T ss_pred CcCCCCCcEeEeHHHHHHHHHHHHHh
Confidence 764111 1 35566776664
No 402
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=93.00 E-value=0.15 Score=43.04 Aligned_cols=93 Identities=20% Similarity=0.164 Sum_probs=50.5
Q ss_pred CchHHHHHH--HHHHcCCCCcEEEEEeCCch-hHH-----HHHHHHh---c-ccCCcE-EEEEc-ch-------------
Q 042616 50 SIAVSRTLA--LVAAARQTGGRVVCILSGVI-GDI-----DASKKSL---G-RYANCI-EFVKG-DA------------- 102 (220)
Q Consensus 50 g~~G~sTl~--LA~A~~~~~grV~tIE~d~~-~~~-----~~Ar~~l---~-g~~~~V-e~v~g-da------------- 102 (220)
|++|-+|+. ||.++...|.+|.-||.| + +.- ....... . .+..++ .++.+ +.
T Consensus 14 GGvGKTT~a~nLA~~La~~G~~VlliD~D-~~q~~l~~~l~~~~~~~~~~~~~~~~~l~~vl~~~~~~~~~~~~~~~~~~ 92 (286)
T 2xj4_A 14 GGAGKSTIAVHLVTALLYGGAKVAVIDLD-LRQRTSARFFENRRAWLDNKKIELPEPLALNLSDNDVALAERPEEEQVAG 92 (286)
T ss_dssp SCTTHHHHHHHHHHHHHHTTCCEEEEECC-TTTCHHHHHHHHHHHHHHHHTCCCCCCEEECSSSCHHHHTTSCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCCcEEEEECC-CCCCCHHHHhCCChhHhHhccccCCCchheEeeCCCCCCcChhhhhhHHH
Confidence 568888775 776666657799999999 7 311 1111111 1 123345 55543 21
Q ss_pred -hhhhhhcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEe
Q 042616 103 -QKLLMGDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 103 -~~~L~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
.+.+..+...||+|+||++. .... ....+... .+.-+|++.
T Consensus 93 l~~~l~~l~~~yD~viiD~p~--~~~~-~~~~~l~~----aD~viiv~~ 134 (286)
T 2xj4_A 93 FEAAFARAMAECDFILIDTPG--GDSA-ITRMAHGR----ADLVVTPMN 134 (286)
T ss_dssp HHHHHHHHHHHCSEEEEECCS--SCCH-HHHHHHHT----CSEEEEEEE
T ss_pred HHHHHHHHHhcCCEEEEcCCC--CccH-HHHHHHHH----CCEEEEEEc
Confidence 12233333579999999998 5433 33344443 334455554
No 403
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=92.95 E-value=0.02 Score=49.23 Aligned_cols=117 Identities=8% Similarity=-0.093 Sum_probs=69.4
Q ss_pred CCChhHHHHHHHHHh--hCCCCEEEEEcCCchHHHHHHHHHH--cCCCCcEEEEEe--CCchhHHHHHHHHh-cccCCcE
Q 042616 23 GKEPDVGEFISALAA--GNNAQLIVMACSSIAVSRTLALVAA--ARQTGGRVVCIL--SGVIGDIDASKKSL-GRYANCI 95 (220)
Q Consensus 23 ~~~p~~~~~L~~La~--~~~a~~ILEIGtg~~G~sTl~LA~A--~~~~~grV~tIE--~d~~~~~~~Ar~~l-~g~~~~V 95 (220)
...+....|+...-+ ..+..+|||+||+ .|.++...+.- .....|+++++| .. |-.. + .|. +-+
T Consensus 54 yRSRAayKL~EIdeK~likpg~~VVDLGaA-PGGWSQvAa~~~~vg~V~G~vig~D~~~~-P~~~------~~~Gv-~~i 124 (269)
T 2px2_A 54 PVSRGTAKLRWLVERRFVQPIGKVVDLGCG-RGGWSYYAATMKNVQEVRGYTKGGPGHEE-PMLM------QSYGW-NIV 124 (269)
T ss_dssp CSSTHHHHHHHHHHTTSCCCCEEEEEETCT-TSHHHHHHTTSTTEEEEEEECCCSTTSCC-CCCC------CSTTG-GGE
T ss_pred cccHHHHHHHHHHHcCCCCCCCEEEEcCCC-CCHHHHHHhhhcCCCCceeEEEccccccC-CCcc------cCCCc-eEE
Confidence 455555555543333 3557899999995 89888877763 211125666666 22 1100 0 121 235
Q ss_pred EEEEc-chhhhhhhcCCCccEEEEcCCCCCc-------cHHHHHHHHHhhcCCCCCCE-EEEEecCCCC
Q 042616 96 EFVKG-DAQKLLMGDYRGADFVLIDCNIDID-------GHKNVFRAAKESVMHGSGAG-VIVGYNALPK 155 (220)
Q Consensus 96 e~v~g-da~~~L~~~~~~~D~VfiD~~k~~~-------~y~~~l~~l~~~~~L~~~Gg-viv~dNv~~~ 155 (220)
+|..| |..+ ++ ..++|+|+.|.....+ .-...++.+... |+| || -+++. +|..
T Consensus 125 ~~~~G~Df~~-~~--~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~--Lk~-gG~~FvvK-VFqg 186 (269)
T 2px2_A 125 TMKSGVDVFY-KP--SEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDW--LSR-GPKEFCIK-ILCP 186 (269)
T ss_dssp EEECSCCGGG-SC--CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHH--HTT-CCSEEEEE-ESCT
T ss_pred EeeccCCccC-CC--CCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHH--hhc-CCcEEEEE-ECCC
Confidence 77778 9887 22 3589999999865221 112357777777 876 66 77775 6664
No 404
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=92.94 E-value=0.17 Score=43.22 Aligned_cols=30 Identities=17% Similarity=0.156 Sum_probs=25.1
Q ss_pred CcEEEEEcchhhhhhhcC-CCccEEEEcCCC
Q 042616 93 NCIEFVKGDAQKLLMGDY-RGADFVLIDCNI 122 (220)
Q Consensus 93 ~~Ve~v~gda~~~L~~~~-~~~D~VfiD~~k 122 (220)
.++++++||+.+.++.+. ++||+||.|.+-
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY 50 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPY 50 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCC
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCC
Confidence 568999999999887653 689999999875
No 405
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=92.83 E-value=0.57 Score=38.61 Aligned_cols=40 Identities=23% Similarity=0.121 Sum_probs=28.0
Q ss_pred CCCEEEEEcC-CchHHHHHH--HHHHcCCCCcEEEEEeCCchhH
Q 042616 40 NAQLIVMACS-SIAVSRTLA--LVAAARQTGGRVVCILSGVIGD 80 (220)
Q Consensus 40 ~a~~ILEIGt-g~~G~sTl~--LA~A~~~~~grV~tIE~d~~~~ 80 (220)
+++.|.-.++ |++|-+|+. ||.++...+.+|.-||.| ++.
T Consensus 5 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D-~~~ 47 (257)
T 1wcv_1 5 KVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLD-PQG 47 (257)
T ss_dssp CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECC-TTC
T ss_pred CCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECC-CCc
Confidence 4555554443 669988875 676666557799999999 763
No 406
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=92.73 E-value=0.48 Score=39.59 Aligned_cols=78 Identities=14% Similarity=0.055 Sum_probs=49.5
Q ss_pred CCEEEEEcCCchHHHHHH-HHHHcCCCCcEEEEEeCCch-------------------hHHHHHHHHhccc--CCcEEEE
Q 042616 41 AQLIVMACSSIAVSRTLA-LVAAARQTGGRVVCILSGVI-------------------GDIDASKKSLGRY--ANCIEFV 98 (220)
Q Consensus 41 a~~ILEIGtg~~G~sTl~-LA~A~~~~~grV~tIE~d~~-------------------~~~~~Ar~~l~g~--~~~Ve~v 98 (220)
.++|+-+|+|+.|...+. |+.+ . -|+++-+|.| . .+++.+++.+..+ .-+|+.+
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~-G--v~~i~lvD~d-~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~ 106 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASA-G--VGNLTLLDFD-TVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV 106 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHH-T--CSEEEEECCC-BCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred CCeEEEEeeCHHHHHHHHHHHHc-C--CCeEEEEcCC-CcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence 367999999888877664 4443 2 3799999999 7 6777777777522 2245655
Q ss_pred Ecchhh-hhhhcCCCccEEEEcCCC
Q 042616 99 KGDAQK-LLMGDYRGADFVLIDCNI 122 (220)
Q Consensus 99 ~gda~~-~L~~~~~~~D~VfiD~~k 122 (220)
..+..+ -+..+...+|+|+.-.+.
T Consensus 107 ~~~~~~~~~~~~~~~~DvVi~~~d~ 131 (249)
T 1jw9_B 107 NALLDDAELAALIAEHDLVLDCTDN 131 (249)
T ss_dssp CSCCCHHHHHHHHHTSSEEEECCSS
T ss_pred eccCCHhHHHHHHhCCCEEEEeCCC
Confidence 544321 122223579998855443
No 407
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=92.60 E-value=0.33 Score=39.08 Aligned_cols=35 Identities=17% Similarity=0.225 Sum_probs=23.8
Q ss_pred EEEEcC-CchHHHHHH--HHHHcCCCCcEEEEEeCCchh
Q 042616 44 IVMACS-SIAVSRTLA--LVAAARQTGGRVVCILSGVIG 79 (220)
Q Consensus 44 ILEIGt-g~~G~sTl~--LA~A~~~~~grV~tIE~d~~~ 79 (220)
|.-.++ |++|-+|+. ||.++...+.+|.-||.| +.
T Consensus 5 i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D-~~ 42 (237)
T 1g3q_A 5 ISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD-LT 42 (237)
T ss_dssp EEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC-TT
T ss_pred EEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCC-CC
Confidence 333333 457877765 676666557799999999 74
No 408
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=92.38 E-value=1.1 Score=38.80 Aligned_cols=99 Identities=14% Similarity=0.120 Sum_probs=55.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHH-HHHHhcc--cCCcEEEEEcchhhhhhhcCCCccEE
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDA-SKKSLGR--YANCIEFVKGDAQKLLMGDYRGADFV 116 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~-Ar~~l~g--~~~~Ve~v~gda~~~L~~~~~~~D~V 116 (220)
++.+|.-||+|.+|++.+.+.. .....+.|+.+|.+ +++++- +...-+. +...+++..++ .+.+ ...|+|
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~-~~~~~~ev~L~Di~-~~~~~g~~~dl~~~~~~~~~~~i~~~~-~~a~----~~aDvV 78 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMA-LRQTANELVLIDVF-KEKAIGEAMDINHGLPFMGQMSLYAGD-YSDV----KDCDVI 78 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHH-HTTCSSEEEEECCC----CCHHHHHHTTSCCCTTCEEEC--C-GGGG----TTCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHH-hCCCCCEEEEEeCC-hHHHHHHHHHHHHhHHhcCCeEEEECC-HHHh----CCCCEE
Confidence 4567988999888887665443 33335699999999 766553 3332222 22456666544 2222 468999
Q ss_pred EEcCCCCC--cc------------HHHHHHHHHhhcCCCCCCEEEEE
Q 042616 117 LIDCNIDI--DG------------HKNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 117 fiD~~k~~--~~------------y~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
++-+.... +. ..++.+.+.+. .| +++|+.
T Consensus 79 ii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~---~p-~a~viv 121 (318)
T 1y6j_A 79 VVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY---YN-HGVILV 121 (318)
T ss_dssp EECCCC------CHHHHHHHHHHHHHHHHHHHHHH---CC-SCEEEE
T ss_pred EEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHh---CC-CcEEEE
Confidence 99876511 11 34556666665 25 565555
No 409
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=92.29 E-value=2 Score=36.40 Aligned_cols=76 Identities=13% Similarity=0.080 Sum_probs=42.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHH-HHHHhcc--cCCcEEEEEc-chhhhhhhcCCCccE
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDA-SKKSLGR--YANCIEFVKG-DAQKLLMGDYRGADF 115 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~-Ar~~l~g--~~~~Ve~v~g-da~~~L~~~~~~~D~ 115 (220)
++.+|.-||+|..|..-......... .+.|+.+|.+ ++.++. +...-++ +...+.+... +. +.+ ...|+
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g~-~~~V~l~d~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~----~~aD~ 78 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRGI-AREIVLEDIA-KERVEAEVLDMQHGSSFYPTVSIDGSDDP-EIC----RDADM 78 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTC-CSEEEEECSS-HHHHHHHHHHHHHTGGGSTTCEEEEESCG-GGG----TTCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEeCC-hhHHHHHHHHHHhhhhhcCCeEEEeCCCH-HHh----CCCCE
Confidence 34689999998777754432222111 2389999999 766652 2221112 2123444433 32 222 46899
Q ss_pred EEEcCCC
Q 042616 116 VLIDCNI 122 (220)
Q Consensus 116 VfiD~~k 122 (220)
||+-...
T Consensus 79 Vii~v~~ 85 (319)
T 1lld_A 79 VVITAGP 85 (319)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9998754
No 410
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=92.23 E-value=1.1 Score=35.89 Aligned_cols=93 Identities=15% Similarity=0.073 Sum_probs=58.0
Q ss_pred EEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhh--hhhhc-CCCccEEEEc
Q 042616 43 LIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQK--LLMGD-YRGADFVLID 119 (220)
Q Consensus 43 ~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~--~L~~~-~~~~D~VfiD 119 (220)
+|+-+|+ |..+..++..+...+-.|+.+|.| ++.++...+.. .++++.||+.+ .|... ....|.|++-
T Consensus 2 ~iiIiG~---G~~G~~la~~L~~~g~~v~vid~~-~~~~~~l~~~~-----~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 72 (218)
T 3l4b_C 2 KVIIIGG---ETTAYYLARSMLSRKYGVVIINKD-RELCEEFAKKL-----KATIIHGDGSHKEILRDAEVSKNDVVVIL 72 (218)
T ss_dssp CEEEECC---HHHHHHHHHHHHHTTCCEEEEESC-HHHHHHHHHHS-----SSEEEESCTTSHHHHHHHTCCTTCEEEEC
T ss_pred EEEEECC---CHHHHHHHHHHHhCCCeEEEEECC-HHHHHHHHHHc-----CCeEEEcCCCCHHHHHhcCcccCCEEEEe
Confidence 4777774 556666666665557789999999 88876644432 36789998854 34332 4678999987
Q ss_pred CCCCCccHHHHHHHHHhhcCCCCCCEEEEE
Q 042616 120 CNIDIDGHKNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 120 ~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
.+. .......-.+.+. +.+ ...+++
T Consensus 73 ~~~--d~~n~~~~~~a~~--~~~-~~~iia 97 (218)
T 3l4b_C 73 TPR--DEVNLFIAQLVMK--DFG-VKRVVS 97 (218)
T ss_dssp CSC--HHHHHHHHHHHHH--TSC-CCEEEE
T ss_pred cCC--cHHHHHHHHHHHH--HcC-CCeEEE
Confidence 766 4333333444443 334 344444
No 411
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=92.23 E-value=0.15 Score=44.64 Aligned_cols=185 Identities=12% Similarity=0.058 Sum_probs=95.2
Q ss_pred CCCChhHHHHHHHHHh--hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccC-CcEEEE
Q 042616 22 RGKEPDVGEFISALAA--GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYA-NCIEFV 98 (220)
Q Consensus 22 ~~~~p~~~~~L~~La~--~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~-~~Ve~v 98 (220)
...+.....|+.+.-+ ..+...|||+||+ .|-++-..+.... ..+|+++|.- ....+. ...++.+. .-|.++
T Consensus 74 ~y~SR~~~KL~ei~~~~~l~~~~~VlDLGaa-pGGwsq~~~~~~g--v~~V~avdvG-~~~he~-P~~~~ql~w~lV~~~ 148 (321)
T 3lkz_A 74 HPVSRGTAKLRWLVERRFLEPVGKVIDLGCG-RGGWCYYMATQKR--VQEVRGYTKG-GPGHEE-PQLVQSYGWNIVTMK 148 (321)
T ss_dssp CCSSTHHHHHHHHHHTTSCCCCEEEEEETCT-TCHHHHHHTTCTT--EEEEEEECCC-STTSCC-CCCCCBTTGGGEEEE
T ss_pred CccchHHHHHHHHHHhcCCCCCCEEEEeCCC-CCcHHHHHHhhcC--CCEEEEEEcC-CCCccC-cchhhhcCCcceEEE
Confidence 4677777777666554 2446789999995 8888876554321 3579999998 442210 00111111 238888
Q ss_pred Ec-chhhhhhhcCCCccEEEEcCCCCCc-------cHHHHHHHHHhhcCCCCCCEEEEEecCCCC--CCcc--------c
Q 042616 99 KG-DAQKLLMGDYRGADFVLIDCNIDID-------GHKNVFRAAKESVMHGSGAGVIVGYNALPK--GSWR--------G 160 (220)
Q Consensus 99 ~g-da~~~L~~~~~~~D~VfiD~~k~~~-------~y~~~l~~l~~~~~L~~~Ggviv~dNv~~~--g~~~--------~ 160 (220)
.+ |...+-| .++|+|+.|-..... ...++|+.+.+- |.+..+-+++. ||.+ ..+. .
T Consensus 149 ~~~Dv~~l~~---~~~D~ivcDigeSs~~~~ve~~Rtl~vLel~~~w--L~~~~~~f~~K-Vl~pY~~~v~e~l~~lq~~ 222 (321)
T 3lkz_A 149 SGVDVFYRPS---ECCDTLLCDIGESSSSAEVEEHRTIRVLEMVEDW--LHRGPREFCVK-VLCPYMPKVIEKMELLQRR 222 (321)
T ss_dssp CSCCTTSSCC---CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHH--HTTCCCEEEEE-ESCTTSHHHHHHHHHHHHH
T ss_pred eccCHhhCCC---CCCCEEEEECccCCCChhhhhhHHHHHHHHHHHH--hccCCCcEEEE-EcCCCChHHHHHHHHHHHH
Confidence 88 7655332 679999999876322 224466666776 65531555664 6654 3211 1
Q ss_pred e--EEEeeecCCc--EEEEEEee-cCC----CC-------CCC-----cCcCceEecccCCCceeEEEeecCCCCCcc
Q 042616 161 Y--KTHFLPIGEG--LLVTRIGE-NSD----VG-------GGR-----KRSRWVVTVDKCTGEEHVFRVTSSSSPRKV 217 (220)
Q Consensus 161 ~--~s~~lPig~G--l~v~~~~~-~~~----~~-------~~~-----~~~~w~~~~d~~~~~~~~~~~~~~~~~~~~ 217 (220)
| --+..|...- -++=...- +|+ .+ +|. ++.++..-||--||--+|=+..-|....+|
T Consensus 223 fgg~lvr~P~SRnst~EmY~vsGa~gNIV~aVn~tSr~Ll~Rm~~~~~~~p~~e~DV~LgsGTRsV~~~~~~~d~~~I 300 (321)
T 3lkz_A 223 YGGGLVRNPLSRNSTHEMYWVSRASGNVVHSVNMTSQVLLGRMEKRTWKGPQYEEDVNLGSGTRAVGKPLLNSDTSKI 300 (321)
T ss_dssp HCCEEECCTTSCTTCCCEEEETTCCSCHHHHHHHHHHHHHHTTSCSSCCCCEEECCCCCCBCCCC-------------
T ss_pred hCCEeEeCCCCCCCcceEEEEecCCCCeeeeHHHHHHHHHHHhhccCCCCCeeCCCCcCCCCCCcccccCCCCCHHHH
Confidence 1 2233443221 11111110 111 00 122 346777899999999999888766555554
No 412
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=92.20 E-value=0.69 Score=42.76 Aligned_cols=100 Identities=11% Similarity=0.003 Sum_probs=68.5
Q ss_pred CEEEEEcCCchHHHHHHHHHHcCCCCcE-EEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhh-------------
Q 042616 42 QLIVMACSSIAVSRTLALVAAARQTGGR-VVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLM------------- 107 (220)
Q Consensus 42 ~~ILEIGtg~~G~sTl~LA~A~~~~~gr-V~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~------------- 107 (220)
-+++|+-|| +|-.++.|-.| |.+ |.++|.| +.+.+.-+.|+... ....++++|..++.+
T Consensus 89 ~~viDLFaG-~GGlslG~~~a----G~~~v~avE~d-~~A~~ty~~N~~~~-p~~~~~~~DI~~i~~~~~~~~~~~~~~~ 161 (482)
T 3me5_A 89 FRFIDLFAG-IGGIRRGFESI----GGQCVFTSEWN-KHAVRTYKANHYCD-PATHHFNEDIRDITLSHQEGVSDEAAAE 161 (482)
T ss_dssp EEEEEESCT-TSHHHHHHHTT----TEEEEEEECCC-HHHHHHHHHHSCCC-TTTCEEESCTHHHHCTTCTTSCHHHHHH
T ss_pred ceEEEecCC-ccHHHHHHHHC----CCEEEEEEeCC-HHHHHHHHHhcccC-CCcceeccchhhhhhccccccchhhHHh
Confidence 579999986 88888887764 444 7899999 88888888887421 124567788877652
Q ss_pred ---hcCCCccEEEEcCCC------------------------CCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 108 ---GDYRGADFVLIDCNI------------------------DIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 108 ---~~~~~~D~VfiD~~k------------------------~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
.....+|+++-..+= +...+.++++.+... +| -++|..||-
T Consensus 162 ~i~~~~~~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~Lf~e~~riI~~~---rP--k~fvlENV~ 229 (482)
T 3me5_A 162 HIRQHIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDAR---RP--AMFVLENVK 229 (482)
T ss_dssp HHHHHSCCCSEEEEECCCCCC------------------CTTTTSHHHHHHHHHHHH---CC--SEEEEEEET
T ss_pred hhhhcCCCCCEEEecCCCcchhhhCcccccccccccccccCccccHHHHHHHHHHHc---CC--cEEEEeCcH
Confidence 113568998754331 112467778888775 44 588888885
No 413
>3cwq_A Para family chromosome partitioning protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: ADP; 2.47A {Synechocystis SP}
Probab=92.18 E-value=0.36 Score=38.85 Aligned_cols=65 Identities=15% Similarity=-0.018 Sum_probs=40.4
Q ss_pred CchHHHHHH--HHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCC-cEEEEEcchhhhhhhcCCCccEEEEcCCC
Q 042616 50 SIAVSRTLA--LVAAARQTGGRVVCILSGVIGDIDASKKSLGRYAN-CIEFVKGDAQKLLMGDYRGADFVLIDCNI 122 (220)
Q Consensus 50 g~~G~sTl~--LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~-~Ve~v~gda~~~L~~~~~~~D~VfiD~~k 122 (220)
|++|-+|+. ||.++...+ +|.-||.| ++.-. ...+.. .+ ..+++.++. +..+...||+|++|++.
T Consensus 10 GGvGKTT~a~~LA~~la~~g-~VlliD~D-~q~~~--~~~~~~-~~l~~~vi~~~~---l~~l~~~yD~viiD~p~ 77 (209)
T 3cwq_A 10 GGVGKTTTAVHLSAYLALQG-ETLLIDGD-PNRSA--TGWGKR-GSLPFKVVDERQ---AAKYAPKYQNIVIDTQA 77 (209)
T ss_dssp TTSSHHHHHHHHHHHHHTTS-CEEEEEEC-TTCHH--HHHHHH-SCCSSEEEEGGG---HHHHGGGCSEEEEEEEC
T ss_pred CCCcHHHHHHHHHHHHHhcC-CEEEEECC-CCCCH--HHHhcC-CCCCcceeCHHH---HHHhhhcCCEEEEeCCC
Confidence 557877765 777777657 99999999 76421 122211 11 114455443 33334679999999987
No 414
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=92.02 E-value=0.16 Score=46.32 Aligned_cols=107 Identities=15% Similarity=0.096 Sum_probs=58.9
Q ss_pred CCEEEEEcCCchHHHHHH--HHHHcCCC-CcEEEEEeCCchhHHHHHHH---HhcccCCcEEEEEc----chhhh----h
Q 042616 41 AQLIVMACSSIAVSRTLA--LVAAARQT-GGRVVCILSGVIGDIDASKK---SLGRYANCIEFVKG----DAQKL----L 106 (220)
Q Consensus 41 a~~ILEIGtg~~G~sTl~--LA~A~~~~-~grV~tIE~d~~~~~~~Ar~---~l~g~~~~Ve~v~g----da~~~----L 106 (220)
++.|+-+|.+++|-+|+. ||.++... +-+|.-||.| +.+.....+ .... .++.++.. |+.++ +
T Consensus 100 ~~vI~ivG~~GvGKTT~a~~LA~~l~~~~G~kVllvd~D-~~r~~a~~ql~~~~~~--~~l~v~~~~~~~dp~~i~~~~l 176 (433)
T 2xxa_A 100 PAVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSAD-VYRPAAIKQLETLAEQ--VGVDFFPSDVGQKPVDIVNAAL 176 (433)
T ss_dssp SEEEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEECC-CSSTTHHHHHHHHHHH--HTCEECCCCSSSCHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHhcCCeEEEEecC-CCCccHHHHHHhhccc--CCeeEEeCCCCCCHHHHHHHHH
Confidence 456777788779988876 66666654 6788888888 744322211 1111 12333332 33333 3
Q ss_pred hhcC-CCccEEEEcCCCCCcc---HHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 107 MGDY-RGADFVLIDCNIDIDG---HKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 107 ~~~~-~~~D~VfiD~~k~~~~---y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
..+. ..||+|+||++..... ....+..+... +.|...++|+|-.
T Consensus 177 ~~~~~~~~D~VIIDTpG~l~~~~~l~~~L~~~~~~--~~p~~vllVvda~ 224 (433)
T 2xxa_A 177 KEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQVHAS--INPVETLFVVDAM 224 (433)
T ss_dssp HHHHHTTCSEEEEECCCCCTTCHHHHHHHHHHHHH--SCCSEEEEEEETT
T ss_pred HHHHhCCCCEEEEECCCcccccHHHHHHHHHHHHh--hcCcceeEEeecc
Confidence 2222 5799999999752121 12223334444 4565566666643
No 415
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=92.00 E-value=0.88 Score=41.77 Aligned_cols=107 Identities=17% Similarity=0.115 Sum_probs=64.7
Q ss_pred hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc-----cc---------CCcEEEEEcchh
Q 042616 38 GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG-----RY---------ANCIEFVKGDAQ 103 (220)
Q Consensus 38 ~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~-----g~---------~~~Ve~v~gda~ 103 (220)
.+...+|.-||+|..|.. +|..+...|-+|+++|.+ ++.++..++... ++ ..++.+ ..|..
T Consensus 5 ~~~~~~I~VIG~G~vG~~---lA~~la~~G~~V~~~d~~-~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~-ttd~~ 79 (478)
T 2y0c_A 5 HHGSMNLTIIGSGSVGLV---TGACLADIGHDVFCLDVD-QAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRF-STDIE 79 (478)
T ss_dssp --CCCEEEEECCSHHHHH---HHHHHHHTTCEEEEECSC-HHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ECCHH
T ss_pred cCCCceEEEECcCHHHHH---HHHHHHhCCCEEEEEECC-HHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEE-ECCHH
Confidence 345678999997655543 333333335689999999 888887766421 11 123433 33444
Q ss_pred hhhhhcCCCccEEEEcCCCCC--------ccHHHHHHHHHhhcCCCCCCEEEEEecCCCCC
Q 042616 104 KLLMGDYRGADFVLIDCNIDI--------DGHKNVFRAAKESVMHGSGAGVIVGYNALPKG 156 (220)
Q Consensus 104 ~~L~~~~~~~D~VfiD~~k~~--------~~y~~~l~~l~~~~~L~~~Ggviv~dNv~~~g 156 (220)
+.+ ...|+||+--+.+. ......++.+.+. +++ |.+||.-.....|
T Consensus 80 ~a~----~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~--l~~-~~iVV~~STv~~g 133 (478)
T 2y0c_A 80 AAV----AHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRY--MTG-FKVIVDKSTVPVG 133 (478)
T ss_dssp HHH----HHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHH--CCS-CEEEEECSCCCTT
T ss_pred HHh----hcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHh--cCC-CCEEEEeCCcCCC
Confidence 444 24799998765410 2336677778887 754 8888776655555
No 416
>3ez2_A Plasmid partition protein A; type IA, DNA binding, winged-HTH, DNA bindin; HET: ADP EPE; 2.05A {Escherichia coli} PDB: 3ez6_A* 3ez7_A
Probab=91.94 E-value=0.43 Score=42.19 Aligned_cols=38 Identities=13% Similarity=0.090 Sum_probs=25.3
Q ss_pred CEEEEEcC--CchHHHHHH--HHHHcC------CCCcEEEEEeCCchhH
Q 042616 42 QLIVMACS--SIAVSRTLA--LVAAAR------QTGGRVVCILSGVIGD 80 (220)
Q Consensus 42 ~~ILEIGt--g~~G~sTl~--LA~A~~------~~~grV~tIE~d~~~~ 80 (220)
.+++-+.+ ||+|-+|+. ||.++. ..+.+|.-||.| ++.
T Consensus 108 ~~vIav~s~KGGvGKTT~a~nLA~~La~~~~~~~~g~rVlliD~D-~q~ 155 (398)
T 3ez2_A 108 AYVIFISNLKGGVSKTVSTVSLAHAMRAHPHLLMEDLRILVIDLD-PQS 155 (398)
T ss_dssp CEEEEECCSSSSSSHHHHHHHHHHHHHHCTTTGGGCCCEEEEEEC-TTC
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHhcchhhcCCCeEEEEeCC-CCC
Confidence 34444432 678988875 666554 237899999999 754
No 417
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=91.87 E-value=0.41 Score=43.17 Aligned_cols=85 Identities=15% Similarity=0.113 Sum_probs=56.4
Q ss_pred CCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhh--hhhhc-CCCccEEE
Q 042616 41 AQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQK--LLMGD-YRGADFVL 117 (220)
Q Consensus 41 a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~--~L~~~-~~~~D~Vf 117 (220)
..+|+-+|.|-.|. .++..+...+-.|+.||.| ++.++.+++. .+.++.||+.+ +|... ....|.|+
T Consensus 4 ~~~viIiG~Gr~G~---~va~~L~~~g~~vvvId~d-~~~v~~~~~~------g~~vi~GDat~~~~L~~agi~~A~~vi 73 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQ---ITGRLLLSSGVKMVVLDHD-PDHIETLRKF------GMKVFYGDATRMDLLESAGAAKAEVLI 73 (413)
T ss_dssp CCSEEEECCSHHHH---HHHHHHHHTTCCEEEEECC-HHHHHHHHHT------TCCCEESCTTCHHHHHHTTTTTCSEEE
T ss_pred CCeEEEECCCHHHH---HHHHHHHHCCCCEEEEECC-HHHHHHHHhC------CCeEEEcCCCCHHHHHhcCCCccCEEE
Confidence 35688888654444 4455554446789999999 9998887752 35688999854 55443 36799999
Q ss_pred EcCCCCCccH-HHHHHHHHhh
Q 042616 118 IDCNIDIDGH-KNVFRAAKES 137 (220)
Q Consensus 118 iD~~k~~~~y-~~~l~~l~~~ 137 (220)
+-.+. ... ......++..
T Consensus 74 v~~~~--~~~n~~i~~~ar~~ 92 (413)
T 3l9w_A 74 NAIDD--PQTNLQLTEMVKEH 92 (413)
T ss_dssp ECCSS--HHHHHHHHHHHHHH
T ss_pred ECCCC--hHHHHHHHHHHHHh
Confidence 87765 332 3445555554
No 418
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=91.84 E-value=0.14 Score=44.03 Aligned_cols=40 Identities=13% Similarity=0.209 Sum_probs=28.3
Q ss_pred CCCCEEEEEcC-CchHHHHHH--HHHHcCCCCcEEEEEeCCchh
Q 042616 39 NNAQLIVMACS-SIAVSRTLA--LVAAARQTGGRVVCILSGVIG 79 (220)
Q Consensus 39 ~~a~~ILEIGt-g~~G~sTl~--LA~A~~~~~grV~tIE~d~~~ 79 (220)
.+++.|+-.++ |+.|-||+. ||.++...+.+|.-||.| +.
T Consensus 102 ~~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D-~r 144 (299)
T 3cio_A 102 TENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDAD-LR 144 (299)
T ss_dssp CSCCEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECC-TT
T ss_pred CCCeEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECC-CC
Confidence 34566666665 457877764 777776657899999999 64
No 419
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=91.59 E-value=0.62 Score=39.18 Aligned_cols=80 Identities=15% Similarity=0.101 Sum_probs=54.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc-ccCCcEEEE-Ecchhhh--hhhcCCCccE
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG-RYANCIEFV-KGDAQKL--LMGDYRGADF 115 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~-g~~~~Ve~v-~gda~~~--L~~~~~~~D~ 115 (220)
+.++||-.|+ +|+.+.+|+..+...+-+|++++.+ +...+.....+. ....+++++ .+|..+. +......+|.
T Consensus 10 ~~~~vlVTGa--tG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 86 (342)
T 1y1p_A 10 EGSLVLVTGA--NGFVASHVVEQLLEHGYKVRGTARS-ASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAG 86 (342)
T ss_dssp TTCEEEEETT--TSHHHHHHHHHHHHTTCEEEEEESS-HHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSE
T ss_pred CCCEEEEECC--ccHHHHHHHHHHHHCCCEEEEEeCC-cccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCE
Confidence 4578999884 6777777777666557799999999 776655444443 122568888 7887542 3333457899
Q ss_pred EEEcCCC
Q 042616 116 VLIDCNI 122 (220)
Q Consensus 116 VfiD~~k 122 (220)
||--+..
T Consensus 87 vih~A~~ 93 (342)
T 1y1p_A 87 VAHIASV 93 (342)
T ss_dssp EEECCCC
T ss_pred EEEeCCC
Confidence 9977654
No 420
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=91.48 E-value=3.8 Score=35.76 Aligned_cols=103 Identities=12% Similarity=0.089 Sum_probs=61.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc---ccCCcEEEEEcchhhhhhhcCCCccEE
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG---RYANCIEFVKGDAQKLLMGDYRGADFV 116 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~---g~~~~Ve~v~gda~~~L~~~~~~~D~V 116 (220)
+..+|.-||+|.+|++.+..... ....+.|+-+|.+ ++.++--..-+. .+...+.+..++..+ + ...|+|
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~-~~~~~el~l~D~~-~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a-~----~~aDiV 80 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVL-QGIAQEIGIVDIF-KDKTKGDAIDLEDALPFTSPKKIYSAEYSD-A----KDADLV 80 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-HTCCSEEEEECSC-HHHHHHHHHHHHTTGGGSCCCEEEECCGGG-G----TTCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHh-CCCCCeEEEEeCC-hHHHHHHHhhHhhhhhhcCCcEEEECcHHH-h----cCCCEE
Confidence 45789999998888866554433 2335699999999 776653333332 222356666666443 2 457999
Q ss_pred EEcCCCCC--------------ccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 117 LIDCNIDI--------------DGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 117 fiD~~k~~--------------~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
++-+...+ .-+.++.+.+.+. .|++=++++-|-
T Consensus 81 vi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~---~p~a~ilvvtNP 127 (326)
T 3vku_A 81 VITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDS---GFNGIFLVAANP 127 (326)
T ss_dssp EECCCCC----------------CHHHHHHHHHTT---TCCSEEEECSSS
T ss_pred EECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhc---CCceEEEEccCc
Confidence 98765411 2245666667766 365555555543
No 421
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=91.47 E-value=0.51 Score=40.79 Aligned_cols=80 Identities=14% Similarity=0.131 Sum_probs=56.2
Q ss_pred hCCCCEEEEEcCCchHHHHHHHHHHcCCC-Cc-EEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhh--hhhhcCCCc
Q 042616 38 GNNAQLIVMACSSIAVSRTLALVAAARQT-GG-RVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQK--LLMGDYRGA 113 (220)
Q Consensus 38 ~~~a~~ILEIGtg~~G~sTl~LA~A~~~~-~g-rV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~--~L~~~~~~~ 113 (220)
..+.++||-.|+ +|+.+.+|+..+... +. +|++++.+ +...+..++.+.. .+++++.+|..+ .+......+
T Consensus 18 ~~~~k~vlVTGa--tG~iG~~l~~~L~~~~g~~~V~~~~r~-~~~~~~~~~~~~~--~~v~~~~~Dl~d~~~l~~~~~~~ 92 (344)
T 2gn4_A 18 MLDNQTILITGG--TGSFGKCFVRKVLDTTNAKKIIVYSRD-ELKQSEMAMEFND--PRMRFFIGDVRDLERLNYALEGV 92 (344)
T ss_dssp TTTTCEEEEETT--TSHHHHHHHHHHHHHCCCSEEEEEESC-HHHHHHHHHHHCC--TTEEEEECCTTCHHHHHHHTTTC
T ss_pred hhCCCEEEEECC--CcHHHHHHHHHHHhhCCCCEEEEEECC-hhhHHHHHHHhcC--CCEEEEECCCCCHHHHHHHHhcC
Confidence 345688999883 677777777766554 54 89999999 7766555544432 479999999754 233445679
Q ss_pred cEEEEcCCC
Q 042616 114 DFVLIDCNI 122 (220)
Q Consensus 114 D~VfiD~~k 122 (220)
|.||--+..
T Consensus 93 D~Vih~Aa~ 101 (344)
T 2gn4_A 93 DICIHAAAL 101 (344)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 999988765
No 422
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=91.46 E-value=0.14 Score=44.21 Aligned_cols=106 Identities=10% Similarity=-0.000 Sum_probs=57.0
Q ss_pred CCEEEEEcCCchHHHHHH--HHHHcCCCCcEEEEEeCCchhHHHHHHH---HhcccCCcEEEEEc----chhhh----hh
Q 042616 41 AQLIVMACSSIAVSRTLA--LVAAARQTGGRVVCILSGVIGDIDASKK---SLGRYANCIEFVKG----DAQKL----LM 107 (220)
Q Consensus 41 a~~ILEIGtg~~G~sTl~--LA~A~~~~~grV~tIE~d~~~~~~~Ar~---~l~g~~~~Ve~v~g----da~~~----L~ 107 (220)
+..|+-+|.+++|-||+. ||..+.+.+++|.-++.| ..+.....+ ..+. .++.++.+ ++.++ +.
T Consensus 98 ~~vi~i~G~~G~GKTT~~~~la~~~~~~g~~v~l~~~D-~~r~~a~~ql~~~~~~--~~v~v~~~~~~~~p~~~~~~~l~ 174 (297)
T 1j8m_F 98 PYVIMLVGVQGTGKTTTAGKLAYFYKKKGFKVGLVGAD-VYRPAALEQLQQLGQQ--IGVPVYGEPGEKDVVGIAKRGVE 174 (297)
T ss_dssp SEEEEEECSSCSSTTHHHHHHHHHHHHTTCCEEEEECC-CSSSHHHHHHHHHHHH--HTCCEECCTTCCCHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEecC-CCCHHHHHHHHHHhcc--CCeEEEecCCCCCHHHHHHHHHH
Confidence 345666787668988865 665555557899888888 654322211 1111 12334333 33332 32
Q ss_pred hcC-CCccEEEEcCCCCCc--cHHHHHH---HHHhhcCCCCCCEEEEEec
Q 042616 108 GDY-RGADFVLIDCNIDID--GHKNVFR---AAKESVMHGSGAGVIVGYN 151 (220)
Q Consensus 108 ~~~-~~~D~VfiD~~k~~~--~y~~~l~---~l~~~~~L~~~Ggviv~dN 151 (220)
.+. ..||+|++|++.... .-...++ .+... +.+...++|.|-
T Consensus 175 ~~~~~~~D~ViIDTpg~~~~~~~~~l~~el~~i~~~--~~~d~vllVvda 222 (297)
T 1j8m_F 175 KFLSEKMEIIIVDTAGRHGYGEEAALLEEMKNIYEA--IKPDEVTLVIDA 222 (297)
T ss_dssp HHHHTTCSEEEEECCCSCCTTCHHHHHHHHHHHHHH--HCCSEEEEEEEG
T ss_pred HHHhCCCCEEEEeCCCCcccccHHHHHHHHHHHHHH--hcCCEEEEEeeC
Confidence 322 689999999986222 1112332 23333 345556666653
No 423
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=91.45 E-value=4.1 Score=35.04 Aligned_cols=73 Identities=19% Similarity=0.111 Sum_probs=47.2
Q ss_pred EEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHH-HHHHhc--ccCCcEEEEEcchhhhhhhcCCCccEEEEc
Q 042616 43 LIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDA-SKKSLG--RYANCIEFVKGDAQKLLMGDYRGADFVLID 119 (220)
Q Consensus 43 ~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~-Ar~~l~--g~~~~Ve~v~gda~~~L~~~~~~~D~VfiD 119 (220)
+|.-||+|.+|++.+.+... ....+.|+-+|.+ +++++. +..... .+...+++..++ .+.+ ...|+|++-
T Consensus 2 KI~IiGaG~vG~~~a~~l~~-~~~~~el~L~Di~-~~k~~g~a~dl~~~~~~~~~~~v~~~~-~~a~----~~aD~Vii~ 74 (310)
T 2xxj_A 2 KVGIVGSGMVGSATAYALAL-LGVAREVVLVDLD-RKLAQAHAEDILHATPFAHPVWVWAGS-YGDL----EGARAVVLA 74 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCCSEEEEECSS-HHHHHHHHHHHHTTGGGSCCCEEEECC-GGGG----TTEEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHh-CCCCCEEEEEeCC-hhHHHHHHHHHHHhHhhcCCeEEEECC-HHHh----CCCCEEEEC
Confidence 57789998888876654433 3335799999999 777764 443333 222456666555 3323 568999997
Q ss_pred CCC
Q 042616 120 CNI 122 (220)
Q Consensus 120 ~~k 122 (220)
+..
T Consensus 75 ag~ 77 (310)
T 2xxj_A 75 AGV 77 (310)
T ss_dssp CCC
T ss_pred CCC
Confidence 755
No 424
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=91.37 E-value=0.44 Score=42.28 Aligned_cols=43 Identities=9% Similarity=0.057 Sum_probs=36.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHH
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKK 86 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~ 86 (220)
++++|+-+|+|.+|..++.++.++ |.+|+.+|++ +...+.++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~---Ga~V~~~d~~-~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRL---GAVVMATDVR-AATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT---TCEEEEECSC-STTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC---CCEEEEEeCC-HHHHHHHHH
Confidence 578999999998999888888875 5689999999 888887766
No 425
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=91.22 E-value=3.7 Score=35.02 Aligned_cols=99 Identities=11% Similarity=0.122 Sum_probs=54.0
Q ss_pred EEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc-c--cCCcEEEEEcchhhhhhhcCCCccEEEEc
Q 042616 43 LIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG-R--YANCIEFVKGDAQKLLMGDYRGADFVLID 119 (220)
Q Consensus 43 ~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~-g--~~~~Ve~v~gda~~~L~~~~~~~D~VfiD 119 (220)
+|.-||+|..|++..... +.....+.|+.+|.+ +++++.....+. . +...+++..++. +.+ ...|+|++-
T Consensus 2 kI~VIGaG~vG~~la~~l-a~~g~~~eV~L~D~~-~~~~~~~~~~l~~~~~~~~~~~i~~~~~-~a~----~~aDvVIi~ 74 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFAL-VLRGSCSELVLVDRD-EDRAQAEAEDIAHAAPVSHGTRVWHGGH-SEL----ADAQVVILT 74 (304)
T ss_dssp EEEEECCSHHHHHHHHHH-HHTTCCSEEEEECSS-HHHHHHHHHHHTTSCCTTSCCEEEEECG-GGG----TTCSEEEEC
T ss_pred EEEEECCCHHHHHHHHHH-HhCCCCCEEEEEeCC-HHHHHHHHHhhhhhhhhcCCeEEEECCH-HHh----CCCCEEEEc
Confidence 678899987777655433 322224589999999 776653222222 2 112344444443 222 467999998
Q ss_pred CCCCCc--------------cHHHHHHHHHhhcCCCCCCEEE-EEecC
Q 042616 120 CNIDID--------------GHKNVFRAAKESVMHGSGAGVI-VGYNA 152 (220)
Q Consensus 120 ~~k~~~--------------~y~~~l~~l~~~~~L~~~Ggvi-v~dNv 152 (220)
...... -..++++.+.+. .| ++++ ++-|.
T Consensus 75 ~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~---~p-~~~vi~~tNP 118 (304)
T 2v6b_A 75 AGANQKPGESRLDLLEKNADIFRELVPQITRA---AP-DAVLLVTSNP 118 (304)
T ss_dssp C------------CHHHHHHHHHHHHHHHHHH---CS-SSEEEECSSS
T ss_pred CCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHh---CC-CeEEEEecCc
Confidence 754101 125666777776 25 5554 44443
No 426
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=91.21 E-value=0.26 Score=43.39 Aligned_cols=91 Identities=11% Similarity=0.013 Sum_probs=56.8
Q ss_pred CCCCEEEEE--cCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc--CCCcc
Q 042616 39 NNAQLIVMA--CSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD--YRGAD 114 (220)
Q Consensus 39 ~~a~~ILEI--Gtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~--~~~~D 114 (220)
.+.++||-+ |+|++|..++.+|++. +.+|++++.+ +++.+.+++. |...-+.....|..+.+..+ ...+|
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~~---Ga~Vi~~~~~-~~~~~~~~~l--Ga~~~~~~~~~~~~~~v~~~t~~~g~d 242 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLKD---GIKLVNIVRK-QEQADLLKAQ--GAVHVCNAASPTFMQDLTEALVSTGAT 242 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHHH---TCCEEEEESS-HHHHHHHHHT--TCSCEEETTSTTHHHHHHHHHHHHCCC
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHC---CCEEEEEECC-HHHHHHHHhC--CCcEEEeCCChHHHHHHHHHhcCCCce
Confidence 567889988 7788999999999876 5699999999 9999888863 22111222223333333222 13699
Q ss_pred EEEEcCCCCCccHHHHHHHHHh
Q 042616 115 FVLIDCNIDIDGHKNVFRAAKE 136 (220)
Q Consensus 115 ~VfiD~~k~~~~y~~~l~~l~~ 136 (220)
++| |+--........++.+..
T Consensus 243 ~v~-d~~g~~~~~~~~~~~l~~ 263 (379)
T 3iup_A 243 IAF-DATGGGKLGGQILTCMEA 263 (379)
T ss_dssp EEE-ESCEEESHHHHHHHHHHH
T ss_pred EEE-ECCCchhhHHHHHHhcch
Confidence 887 443301123555566543
No 427
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=91.17 E-value=1.1 Score=41.61 Aligned_cols=89 Identities=7% Similarity=-0.017 Sum_probs=58.4
Q ss_pred hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccEEE
Q 042616 38 GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFVL 117 (220)
Q Consensus 38 ~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~Vf 117 (220)
....++|+-+|+|.+|...+.++++. |.+|+.+|++ +...+.|++. |. ++ .+..+.+ ...|+|+
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~---Ga~Viv~d~~-~~~~~~A~~~--Ga----~~--~~l~e~l----~~aDvVi 334 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQ---GARVSVTEID-PINALQAMME--GF----DV--VTVEEAI----GDADIVV 334 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT---TCEEEEECSC-HHHHHHHHHT--TC----EE--CCHHHHG----GGCSEEE
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHC---CCEEEEEeCC-HHHHHHHHHc--CC----EE--ecHHHHH----hCCCEEE
Confidence 35678999999988888887777764 6799999999 8887776542 32 22 2444544 3589998
Q ss_pred EcCCCCCccHHHHHHHHHhhcCCCCCCEEEEE
Q 042616 118 IDCNIDIDGHKNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 118 iD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
.-... ..... ....+. +++ ||+|+.
T Consensus 335 ~atgt--~~~i~--~~~l~~--mk~-ggilvn 359 (494)
T 3ce6_A 335 TATGN--KDIIM--LEHIKA--MKD-HAILGN 359 (494)
T ss_dssp ECSSS--SCSBC--HHHHHH--SCT-TCEEEE
T ss_pred ECCCC--HHHHH--HHHHHh--cCC-CcEEEE
Confidence 76554 33211 234444 544 887764
No 428
>3ez9_A Para; DNA binding, winged-HTH, partition, biosynthetic protein; 2.80A {Salmonella enterica subsp} PDB: 3ezf_A
Probab=91.14 E-value=0.31 Score=43.22 Aligned_cols=41 Identities=15% Similarity=0.061 Sum_probs=20.6
Q ss_pred CCCCEEEEEcC-CchHHHHHH--HHHHcC------CCCcEEEEEeCCchhH
Q 042616 39 NNAQLIVMACS-SIAVSRTLA--LVAAAR------QTGGRVVCILSGVIGD 80 (220)
Q Consensus 39 ~~a~~ILEIGt-g~~G~sTl~--LA~A~~------~~~grV~tIE~d~~~~ 80 (220)
.+++.|.-++. ||+|-+|+. ||.++. ..+.+|.-||.| ++.
T Consensus 109 ~~~~vIav~s~KGGvGKTT~a~nLA~~LA~~g~~~~~g~rVlliD~D-~~~ 158 (403)
T 3ez9_A 109 KSPYVIFVVNLKGGVSKTVSTVTLAHALRVHQDLLRHDLRILVIDLD-PQA 158 (403)
T ss_dssp CSCEEEEECCC--------CHHHHHHHHHSCGGGGGGCCCEEEEEES-SSS
T ss_pred CCceEEEEEcCCCCchHHHHHHHHHHHHHhcchhhcCCCeEEEEeCC-CCC
Confidence 34454544432 678988875 666554 237799999998 653
No 429
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=91.13 E-value=0.65 Score=37.60 Aligned_cols=80 Identities=8% Similarity=0.028 Sum_probs=54.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhh--hhhc-------C
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKL--LMGD-------Y 110 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~--L~~~-------~ 110 (220)
+.++||-.|. +|.....+++.+.+.+.+|+.++.+ ++..+...+.++....++.++.+|..+. +... .
T Consensus 10 ~~~~vlVtGa--sggiG~~la~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 86 (255)
T 1fmc_A 10 DGKCAIITGA--GAGIGKEIAITFATAGASVVVSDIN-ADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL 86 (255)
T ss_dssp TTCEEEETTT--TSHHHHHHHHHHHTTTCEEEEEESC-HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC--ccHHHHHHHHHHHHCCCEEEEEcCC-HHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 4578888773 5666777777776668899999999 7776655555543335688888886431 2111 2
Q ss_pred CCccEEEEcCCC
Q 042616 111 RGADFVLIDCNI 122 (220)
Q Consensus 111 ~~~D~VfiD~~k 122 (220)
+++|.|+.-+..
T Consensus 87 ~~~d~vi~~Ag~ 98 (255)
T 1fmc_A 87 GKVDILVNNAGG 98 (255)
T ss_dssp SSCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 479999976653
No 430
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=91.12 E-value=1.3 Score=39.09 Aligned_cols=95 Identities=15% Similarity=0.060 Sum_probs=61.2
Q ss_pred CCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc------c--cCCcEEEEEcchhhhhhhcCCC
Q 042616 41 AQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG------R--YANCIEFVKGDAQKLLMGDYRG 112 (220)
Q Consensus 41 a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~------g--~~~~Ve~v~gda~~~L~~~~~~ 112 (220)
..+|.-||+|..|. .||..+...+-.|+.++.+ ++.++..++.-. + +..++.+ ..|..+.+ ..
T Consensus 29 ~mkI~VIGaG~mG~---alA~~La~~G~~V~l~~r~-~~~~~~i~~~~~~~~~l~g~~l~~~i~~-t~d~~ea~----~~ 99 (356)
T 3k96_A 29 KHPIAILGAGSWGT---ALALVLARKGQKVRLWSYE-SDHVDEMQAEGVNNRYLPNYPFPETLKA-YCDLKASL----EG 99 (356)
T ss_dssp CSCEEEECCSHHHH---HHHHHHHTTTCCEEEECSC-HHHHHHHHHHSSBTTTBTTCCCCTTEEE-ESCHHHHH----TT
T ss_pred CCeEEEECccHHHH---HHHHHHHHCCCeEEEEeCC-HHHHHHHHHcCCCcccCCCCccCCCeEE-ECCHHHHH----hc
Confidence 45788899764443 4444444435579999999 888777665421 1 1223443 34555554 35
Q ss_pred ccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEE
Q 042616 113 ADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 113 ~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
.|+||+--+. ....++++.+.+. +.+ +.+||.
T Consensus 100 aDvVilaVp~--~~~~~vl~~i~~~--l~~-~~ivvs 131 (356)
T 3k96_A 100 VTDILIVVPS--FAFHEVITRMKPL--IDA-KTRIAW 131 (356)
T ss_dssp CCEEEECCCH--HHHHHHHHHHGGG--CCT-TCEEEE
T ss_pred CCEEEECCCH--HHHHHHHHHHHHh--cCC-CCEEEE
Confidence 7999998876 6668888999888 754 666543
No 431
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=90.96 E-value=1.5 Score=35.54 Aligned_cols=92 Identities=18% Similarity=0.172 Sum_probs=58.4
Q ss_pred CCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchh--hhhhhc-CCCccEEE
Q 042616 41 AQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQ--KLLMGD-YRGADFVL 117 (220)
Q Consensus 41 a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~--~~L~~~-~~~~D~Vf 117 (220)
.++|+-+|+ |..+..++..+...+- |+.||.| ++.++.++ ..++++.||+. +.|... ....|.|+
T Consensus 9 ~~~viI~G~---G~~G~~la~~L~~~g~-v~vid~~-~~~~~~~~-------~~~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (234)
T 2aef_A 9 SRHVVICGW---SESTLECLRELRGSEV-FVLAEDE-NVRKKVLR-------SGANFVHGDPTRVSDLEKANVRGARAVI 76 (234)
T ss_dssp -CEEEEESC---CHHHHHHHHHSTTSEE-EEEESCG-GGHHHHHH-------TTCEEEESCTTCHHHHHHTTCTTCSEEE
T ss_pred CCEEEEECC---ChHHHHHHHHHHhCCe-EEEEECC-HHHHHHHh-------cCCeEEEcCCCCHHHHHhcCcchhcEEE
Confidence 467888885 4555677777776444 9999999 88776554 13788999986 445433 46789999
Q ss_pred EcCCCCCccH-HHHHHHHHhhcCCCCCCEEEEEe
Q 042616 118 IDCNIDIDGH-KNVFRAAKESVMHGSGAGVIVGY 150 (220)
Q Consensus 118 iD~~k~~~~y-~~~l~~l~~~~~L~~~Ggviv~d 150 (220)
+-.+. ... ......++.. .| +..+++.
T Consensus 77 ~~~~~--d~~n~~~~~~a~~~---~~-~~~iia~ 104 (234)
T 2aef_A 77 VDLES--DSETIHCILGIRKI---DE-SVRIIAE 104 (234)
T ss_dssp ECCSC--HHHHHHHHHHHHHH---CS-SSEEEEE
T ss_pred EcCCC--cHHHHHHHHHHHHH---CC-CCeEEEE
Confidence 87765 322 2233444443 34 4455554
No 432
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=90.91 E-value=0.84 Score=41.68 Aligned_cols=74 Identities=15% Similarity=0.157 Sum_probs=52.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchh--hhhhhc-CCCccEE
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQ--KLLMGD-YRGADFV 116 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~--~~L~~~-~~~~D~V 116 (220)
+..+|+-+|+|-+|+ .||+.+...+-.|+-||.| ++.++.+...+ .+..++||+. +.|.+. .+..|++
T Consensus 2 ~~M~iiI~G~G~vG~---~la~~L~~~~~~v~vId~d-~~~~~~~~~~~-----~~~~i~Gd~~~~~~L~~Agi~~ad~~ 72 (461)
T 4g65_A 2 NAMKIIILGAGQVGG---TLAENLVGENNDITIVDKD-GDRLRELQDKY-----DLRVVNGHASHPDVLHEAGAQDADML 72 (461)
T ss_dssp CCEEEEEECCSHHHH---HHHHHTCSTTEEEEEEESC-HHHHHHHHHHS-----SCEEEESCTTCHHHHHHHTTTTCSEE
T ss_pred CcCEEEEECCCHHHH---HHHHHHHHCCCCEEEEECC-HHHHHHHHHhc-----CcEEEEEcCCCHHHHHhcCCCcCCEE
Confidence 566899888765555 5677776645679999999 99888776654 3678999985 455443 3678988
Q ss_pred EEcCCC
Q 042616 117 LIDCNI 122 (220)
Q Consensus 117 fiD~~k 122 (220)
+.=.+.
T Consensus 73 ia~t~~ 78 (461)
T 4g65_A 73 VAVTNT 78 (461)
T ss_dssp EECCSC
T ss_pred EEEcCC
Confidence 754433
No 433
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=90.89 E-value=1.6 Score=36.96 Aligned_cols=99 Identities=15% Similarity=0.199 Sum_probs=58.1
Q ss_pred CCEEEEEcCCchHHH-HHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc---------cc-C-------------CcEE
Q 042616 41 AQLIVMACSSIAVSR-TLALVAAARQTGGRVVCILSGVIGDIDASKKSLG---------RY-A-------------NCIE 96 (220)
Q Consensus 41 a~~ILEIGtg~~G~s-Tl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~---------g~-~-------------~~Ve 96 (220)
-++|.-||+|..|.. +..|+. .+-+|+.+|++ ++.++.+++.+. |. . .+++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~----~G~~V~~~d~~-~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~ 89 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAA----TGHTVVLVDQT-EDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIA 89 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH----TTCEEEEECSC-HHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEE
T ss_pred CCEEEEECCCHHHHHHHHHHHh----CCCeEEEEECC-HHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceE
Confidence 367999998766652 223333 25689999999 888887654321 21 0 1243
Q ss_pred EEEcchhhhhhhcCCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecCC
Q 042616 97 FVKGDAQKLLMGDYRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNAL 153 (220)
Q Consensus 97 ~v~gda~~~L~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv~ 153 (220)
+ ..|..+.+ ...|+||+-.+.+......+++.+.+. +. ++.+| +.|..
T Consensus 90 ~-~~~~~~~~----~~aD~Vi~avp~~~~~~~~v~~~l~~~--~~-~~~iv-~s~ts 137 (302)
T 1f0y_A 90 T-STDAASVV----HSTDLVVEAIVENLKVKNELFKRLDKF--AA-EHTIF-ASNTS 137 (302)
T ss_dssp E-ESCHHHHT----TSCSEEEECCCSCHHHHHHHHHHHTTT--SC-TTCEE-EECCS
T ss_pred E-ecCHHHhh----cCCCEEEEcCcCcHHHHHHHHHHHHhh--CC-CCeEE-EECCC
Confidence 3 23444333 468999987755111135677888776 64 46655 44543
No 434
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=90.86 E-value=3.2 Score=35.91 Aligned_cols=76 Identities=7% Similarity=-0.019 Sum_probs=43.3
Q ss_pred CCCEEEEEc-CCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc-ccCCcEEEEEc--chhhhhhhcCCCccE
Q 042616 40 NAQLIVMAC-SSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG-RYANCIEFVKG--DAQKLLMGDYRGADF 115 (220)
Q Consensus 40 ~a~~ILEIG-tg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~-g~~~~Ve~v~g--da~~~L~~~~~~~D~ 115 (220)
++.+|+-+| +|.+|++.+..... ......|+.+|.+ ++ ...+..... ....+++.+.+ |..+.+ ...|+
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~-~g~~~ev~l~Di~-~~-~~~~~dL~~~~~~~~v~~~~~t~d~~~al----~gaDv 79 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKM-NPLVSVLHLYDVV-NA-PGVTADISHMDTGAVVRGFLGQQQLEAAL----TGMDL 79 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHH-CTTEEEEEEEESS-SH-HHHHHHHHTSCSSCEEEEEESHHHHHHHH----TTCSE
T ss_pred CCCEEEEECCCChHHHHHHHHHHh-CCCCCEEEEEeCC-Cc-HhHHHHhhcccccceEEEEeCCCCHHHHc----CCCCE
Confidence 456899999 78888876544322 1112589999998 65 222222222 22124554444 333433 46899
Q ss_pred EEEcCCC
Q 042616 116 VLIDCNI 122 (220)
Q Consensus 116 VfiD~~k 122 (220)
||+-+..
T Consensus 80 Vi~~ag~ 86 (326)
T 1smk_A 80 IIVPAGV 86 (326)
T ss_dssp EEECCCC
T ss_pred EEEcCCc
Confidence 9988764
No 435
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=90.82 E-value=0.18 Score=43.82 Aligned_cols=76 Identities=12% Similarity=0.034 Sum_probs=52.0
Q ss_pred CChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchh
Q 042616 24 KEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQ 103 (220)
Q Consensus 24 ~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~ 103 (220)
.+++..+.|-.+ ...+...|||--+| +|.+++.... .+.+.+++|.+ +..++.|++.++......+.+++|+.
T Consensus 237 kp~~l~~~~i~~-~~~~~~~VlDpF~G-sGtt~~aa~~----~gr~~ig~e~~-~~~~~~~~~r~~~~~~~~~~~~~~~~ 309 (323)
T 1boo_A 237 FPAKLPEFFIRM-LTEPDDLVVDIFGG-SNTTGLVAER----ESRKWISFEMK-PEYVAASAFRFLDNNISEEKITDIYN 309 (323)
T ss_dssp CCTHHHHHHHHH-HCCTTCEEEETTCT-TCHHHHHHHH----TTCEEEEEESC-HHHHHHHHGGGSCSCSCHHHHHHHHH
T ss_pred CCHHHHHHHHHH-hCCCCCEEEECCCC-CCHHHHHHHH----cCCCEEEEeCC-HHHHHHHHHHHHhcccchHHHHHHHH
Confidence 334444433332 24567899999876 7876553222 37799999999 99999999999833334667778887
Q ss_pred hhh
Q 042616 104 KLL 106 (220)
Q Consensus 104 ~~L 106 (220)
++.
T Consensus 310 ~i~ 312 (323)
T 1boo_A 310 RIL 312 (323)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 436
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=90.82 E-value=0.48 Score=40.36 Aligned_cols=80 Identities=16% Similarity=0.118 Sum_probs=52.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHH----HHHHHHhc-ccCCcEEEEEcchhhh--hhhcCCC
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDI----DASKKSLG-RYANCIEFVKGDAQKL--LMGDYRG 112 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~----~~Ar~~l~-g~~~~Ve~v~gda~~~--L~~~~~~ 112 (220)
..++||-+|+ +|+.+.+|+..+...+-+|++++.+ +... +..+..+. ....+++++.+|..+. +......
T Consensus 24 ~~~~vlVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 100 (351)
T 3ruf_A 24 SPKTWLITGV--AGFIGSNLLEKLLKLNQVVIGLDNF-STGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKG 100 (351)
T ss_dssp SCCEEEEETT--TSHHHHHHHHHHHHTTCEEEEEECC-SSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTT
T ss_pred CCCeEEEECC--CcHHHHHHHHHHHHCCCEEEEEeCC-CCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcC
Confidence 5688999983 6777778877776557899999986 4322 22222211 1115799999997542 3344568
Q ss_pred ccEEEEcCCC
Q 042616 113 ADFVLIDCNI 122 (220)
Q Consensus 113 ~D~VfiD~~k 122 (220)
+|.||--+..
T Consensus 101 ~d~Vih~A~~ 110 (351)
T 3ruf_A 101 VDHVLHQAAL 110 (351)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCcc
Confidence 9999977654
No 437
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=90.80 E-value=0.53 Score=41.00 Aligned_cols=101 Identities=9% Similarity=0.010 Sum_probs=62.4
Q ss_pred HhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcc--hhhhhhhc--CC
Q 042616 36 AAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGD--AQKLLMGD--YR 111 (220)
Q Consensus 36 a~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gd--a~~~L~~~--~~ 111 (220)
+...+.++||-+|+|++|..++.+|+++. +.+|++++.+ +++.+.+++. |. +. ++.-. ..+.+..+ ..
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~--Ga~Vi~~~~~-~~~~~~~~~l--Ga-~~--vi~~~~~~~~~v~~~~~g~ 253 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMT--PATVIALDVK-EEKLKLAERL--GA-DH--VVDARRDPVKQVMELTRGR 253 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHC--CCEEEEEESS-HHHHHHHHHT--TC-SE--EEETTSCHHHHHHHHTTTC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC--CCeEEEEeCC-HHHHHHHHHh--CC-CE--EEeccchHHHHHHHHhCCC
Confidence 34456789999999889999999998762 4699999999 8999888753 22 11 12211 22223222 23
Q ss_pred CccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 112 GADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 112 ~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
.+|+|| |+-- ......++.+.+ + + ||.++.-..
T Consensus 254 g~Dvvi-d~~G--~~~~~~~~~~~~---~-~-~G~~v~~g~ 286 (359)
T 1h2b_A 254 GVNVAM-DFVG--SQATVDYTPYLL---G-R-MGRLIIVGY 286 (359)
T ss_dssp CEEEEE-ESSC--CHHHHHHGGGGE---E-E-EEEEEECCC
T ss_pred CCcEEE-ECCC--CchHHHHHHHhh---c-C-CCEEEEEeC
Confidence 799887 4433 211114555554 3 4 777776544
No 438
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=90.66 E-value=4.2 Score=35.12 Aligned_cols=76 Identities=14% Similarity=0.096 Sum_probs=48.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHH-HHHHhc--ccCCcEEEEEcchhhhhhhcCCCccEE
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDA-SKKSLG--RYANCIEFVKGDAQKLLMGDYRGADFV 116 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~-Ar~~l~--g~~~~Ve~v~gda~~~L~~~~~~~D~V 116 (220)
+..+|.-||+|.+|++.+.+... ......|+-+|.+ +++++. +...-. .+...+++..++ .+.+ ...|+|
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~-~~~~~el~L~Di~-~~~~~g~~~dl~~~~~~~~~~~v~~~~-~~a~----~~aDvV 76 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQ-QGIAEEFVIVDVV-KDRTKGDALDLEDAQAFTAPKKIYSGE-YSDC----KDADLV 76 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHH-HTCCSEEEEECSS-HHHHHHHHHHHHGGGGGSCCCEEEECC-GGGG----TTCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHc-CCCCCEEEEEeCC-chHHHHHHHHHHHHHHhcCCeEEEECC-HHHh----CCCCEE
Confidence 34689999999888876655433 3335689999999 777764 333322 232456666544 3323 467999
Q ss_pred EEcCCC
Q 042616 117 LIDCNI 122 (220)
Q Consensus 117 fiD~~k 122 (220)
++-+..
T Consensus 77 ii~ag~ 82 (318)
T 1ez4_A 77 VITAGA 82 (318)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 998765
No 439
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=90.64 E-value=2.3 Score=38.75 Aligned_cols=113 Identities=16% Similarity=0.117 Sum_probs=71.2
Q ss_pred hHHHHHHHHHhh-CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhh-
Q 042616 27 DVGEFISALAAG-NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQK- 104 (220)
Q Consensus 27 ~~~~~L~~La~~-~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~- 104 (220)
..-+++..+-.. .+.++|+-+|. |-.+..||+.+.+ .-.|.-||.| +++++...+.+ +++.+++||+.+
T Consensus 220 ~i~~~~~~~g~~~~~~~~v~I~Gg---G~ig~~lA~~L~~-~~~v~iIE~d-~~r~~~la~~l----~~~~Vi~GD~td~ 290 (461)
T 4g65_A 220 HIRSVMSELQRLEKPYRRIMIVGG---GNIGASLAKRLEQ-TYSVKLIERN-LQRAEKLSEEL----ENTIVFCGDAADQ 290 (461)
T ss_dssp THHHHHHHTTGGGSCCCEEEEECC---SHHHHHHHHHHTT-TSEEEEEESC-HHHHHHHHHHC----TTSEEEESCTTCH
T ss_pred hHHHHHHhhccccccccEEEEEcc---hHHHHHHHHHhhh-cCceEEEecC-HHHHHHHHHHC----CCceEEeccccch
Confidence 345566555443 34688998884 4455577777766 6899999999 88887776665 568899999965
Q ss_pred -hhhhc-CCCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 105 -LLMGD-YRGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 105 -~L~~~-~~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
+|.+. ....|.++.=.+. +-.+++-.+.-+. +..+-.+..+.|.
T Consensus 291 ~~L~ee~i~~~D~~ia~T~~---De~Ni~~~llAk~-~gv~kvIa~vn~~ 336 (461)
T 4g65_A 291 ELLTEENIDQVDVFIALTNE---DETNIMSAMLAKR-MGAKKVMVLIQRG 336 (461)
T ss_dssp HHHHHTTGGGCSEEEECCSC---HHHHHHHHHHHHH-TTCSEEEEECSCH
T ss_pred hhHhhcCchhhcEEEEcccC---cHHHHHHHHHHHH-cCCcccccccccc
Confidence 55442 2678988866655 2334433322221 3344455555544
No 440
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=90.63 E-value=1.3 Score=35.75 Aligned_cols=73 Identities=11% Similarity=0.123 Sum_probs=51.0
Q ss_pred CCEEEEEcCCchHHHHHHHHHHcCCCC-cEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhh--hhhhcCCCccEEE
Q 042616 41 AQLIVMACSSIAVSRTLALVAAARQTG-GRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQK--LLMGDYRGADFVL 117 (220)
Q Consensus 41 a~~ILEIGtg~~G~sTl~LA~A~~~~~-grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~--~L~~~~~~~D~Vf 117 (220)
.++||-+|. +|.....+++.+...+ -+|+++..+ ++.++. -...+++++.+|..+ .+......+|.||
T Consensus 23 mk~vlVtGa--tG~iG~~l~~~L~~~G~~~V~~~~R~-~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv 93 (236)
T 3qvo_A 23 MKNVLILGA--GGQIARHVINQLADKQTIKQTLFARQ-PAKIHK------PYPTNSQIIMGDVLNHAALKQAMQGQDIVY 93 (236)
T ss_dssp CEEEEEETT--TSHHHHHHHHHHTTCTTEEEEEEESS-GGGSCS------SCCTTEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred ccEEEEEeC--CcHHHHHHHHHHHhCCCceEEEEEcC-hhhhcc------cccCCcEEEEecCCCHHHHHHHhcCCCEEE
Confidence 468998883 6777778888877756 589999999 654311 122579999999754 2333346789999
Q ss_pred EcCCC
Q 042616 118 IDCNI 122 (220)
Q Consensus 118 iD~~k 122 (220)
..+..
T Consensus 94 ~~a~~ 98 (236)
T 3qvo_A 94 ANLTG 98 (236)
T ss_dssp EECCS
T ss_pred EcCCC
Confidence 87765
No 441
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=90.61 E-value=5 Score=34.41 Aligned_cols=100 Identities=18% Similarity=0.094 Sum_probs=55.6
Q ss_pred EEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc-cc--CCcEEEEEcchhhhhhhcCCCccEEEEc
Q 042616 43 LIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG-RY--ANCIEFVKGDAQKLLMGDYRGADFVLID 119 (220)
Q Consensus 43 ~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~-g~--~~~Ve~v~gda~~~L~~~~~~~D~VfiD 119 (220)
+|.-||+|..|..-+........ ...|+.+|++ ++.++.....+. +. .....+...|. +.+ ...|+||+-
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~-~~~V~l~D~~-~~~~~~~~~~l~~~~~~~~~~~i~~~d~-~~~----~~aDvViia 74 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGF-AREMVLIDVD-KKRAEGDALDLIHGTPFTRRANIYAGDY-ADL----KGSDVVIVA 74 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTC-CSEEEEECSS-HHHHHHHHHHHHHHGGGSCCCEEEECCG-GGG----TTCSEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-CCeEEEEeCC-hHHHHHHHHHHHhhhhhcCCcEEEeCCH-HHh----CCCCEEEEc
Confidence 57789988777654432222111 3489999999 877766443332 21 11233333442 322 468999998
Q ss_pred CCCCCc--------------cHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 120 CNIDID--------------GHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 120 ~~k~~~--------------~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
...... -..++++.+.+. . |++-+|++-|-
T Consensus 75 v~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~--~-~~~~ii~~tNp 118 (319)
T 1a5z_A 75 AGVPQKPGETRLQLLGRNARVMKEIARNVSKY--A-PDSIVIVVTNP 118 (319)
T ss_dssp CCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH--C-TTCEEEECSSS
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh--C-CCeEEEEeCCc
Confidence 775111 035667777776 2 53444454443
No 442
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=90.59 E-value=0.54 Score=39.16 Aligned_cols=80 Identities=10% Similarity=0.096 Sum_probs=53.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc-ccCCcEEEEEcchhhh---hhhc------
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG-RYANCIEFVKGDAQKL---LMGD------ 109 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~-g~~~~Ve~v~gda~~~---L~~~------ 109 (220)
+.+.||-.|+ +|.....+|+.+...|.+|+.++.+ ++..+.+.+.+. ....+++++..|..+. +..+
T Consensus 11 ~~k~vlITGa--s~GIG~~~a~~L~~~G~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~ 87 (311)
T 3o26_A 11 KRRCAVVTGG--NKGIGFEICKQLSSNGIMVVLTCRD-VTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKT 87 (311)
T ss_dssp -CCEEEESSC--SSHHHHHHHHHHHHTTCEEEEEESC-HHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCcEEEEecC--CchHHHHHHHHHHHCCCEEEEEeCC-HHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHH
Confidence 4678888885 3334445555554448899999999 887777666665 2235799999887543 1111
Q ss_pred -CCCccEEEEcCCC
Q 042616 110 -YRGADFVLIDCNI 122 (220)
Q Consensus 110 -~~~~D~VfiD~~k 122 (220)
.+++|.+|..+..
T Consensus 88 ~~g~iD~lv~nAg~ 101 (311)
T 3o26_A 88 HFGKLDILVNNAGV 101 (311)
T ss_dssp HHSSCCEEEECCCC
T ss_pred hCCCCCEEEECCcc
Confidence 3589999988875
No 443
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=90.56 E-value=1.1 Score=35.05 Aligned_cols=70 Identities=19% Similarity=0.255 Sum_probs=47.7
Q ss_pred EEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccEEEEcCCC
Q 042616 43 LIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFVLIDCNI 122 (220)
Q Consensus 43 ~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~VfiD~~k 122 (220)
+||-+|. +|.....+++.+...+-+|+++..+ ++..+.. . .+++++.+|..+.-......+|.||.-+..
T Consensus 2 kvlVtGa--tG~iG~~l~~~L~~~g~~V~~~~R~-~~~~~~~----~---~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 71 (221)
T 3ew7_A 2 KIGIIGA--TGRAGSRILEEAKNRGHEVTAIVRN-AGKITQT----H---KDINILQKDIFDLTLSDLSDQNVVVDAYGI 71 (221)
T ss_dssp EEEEETT--TSHHHHHHHHHHHHTTCEEEEEESC-SHHHHHH----C---SSSEEEECCGGGCCHHHHTTCSEEEECCCS
T ss_pred eEEEEcC--CchhHHHHHHHHHhCCCEEEEEEcC-chhhhhc----c---CCCeEEeccccChhhhhhcCCCEEEECCcC
Confidence 5888883 5666666666665557899999999 7654322 1 468899999865322223578999977654
No 444
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=90.56 E-value=5 Score=34.91 Aligned_cols=76 Identities=12% Similarity=0.077 Sum_probs=48.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc-c--c-CCcEEEEEcchhhhhhhcCCCccE
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG-R--Y-ANCIEFVKGDAQKLLMGDYRGADF 115 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~-g--~-~~~Ve~v~gda~~~L~~~~~~~D~ 115 (220)
+..+|.-||+|..|++.+....... ..+.|+.+|.+ +++++.-..-+. + + ...+++..++... + ...|+
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~-~~~~l~l~D~~-~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a-~----~~aDv 76 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQG-ITDELVVIDVN-KEKAMGDVMDLNHGKAFAPQPVKTSYGTYED-C----KDADI 76 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHT-CCSEEEEECSC-HHHHHHHHHHHHHTGGGSSSCCEEEEECGGG-G----TTCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC-CCceEEEEecc-hHHHHHHHHHHHhccccccCCeEEEeCcHHH-h----CCCCE
Confidence 4678999999888887665433322 24699999999 776654222232 2 2 2346666666432 2 46799
Q ss_pred EEEcCCC
Q 042616 116 VLIDCNI 122 (220)
Q Consensus 116 VfiD~~k 122 (220)
||+-+..
T Consensus 77 Vvi~ag~ 83 (326)
T 3pqe_A 77 VCICAGA 83 (326)
T ss_dssp EEECCSC
T ss_pred EEEeccc
Confidence 9998754
No 445
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=90.53 E-value=3 Score=40.37 Aligned_cols=80 Identities=10% Similarity=-0.010 Sum_probs=49.7
Q ss_pred CCCEEEEEcCCchHHHHHH-HHHHcCCCCcEEEEEeCCch------------------hHHHHHHHHhccc--CCcEEEE
Q 042616 40 NAQLIVMACSSIAVSRTLA-LVAAARQTGGRVVCILSGVI------------------GDIDASKKSLGRY--ANCIEFV 98 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~-LA~A~~~~~grV~tIE~d~~------------------~~~~~Ar~~l~g~--~~~Ve~v 98 (220)
+..+||-+|+|+.|...+. ||.+ . -|+++-+|.|.- .+++.|++.++.+ .-+|+.+
T Consensus 410 ~~~~vlvvG~GglG~~~~~~L~~~-G--vg~i~l~D~d~v~~snl~rq~~~~~~~vg~~Ka~~~~~~l~~~np~~~v~~~ 486 (805)
T 2nvu_B 410 DTCKVLVIGAGGLGCELLKNLALS-G--FRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPH 486 (805)
T ss_dssp HTCCEEEECCSSHHHHHHHHHHTT-T--CCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCEEEEE
T ss_pred hCCeEEEECCCHHHHHHHHHHHHc-C--CCcEEEECCCeecccccccccccchhhcCChHHHHHHHHHHHHCCCCEEEEE
Confidence 3567888999889987664 4432 2 489999999821 2456667766522 2346666
Q ss_pred EcchhhhhhhcCCCccEEEEcCCC
Q 042616 99 KGDAQKLLMGDYRGADFVLIDCNI 122 (220)
Q Consensus 99 ~gda~~~L~~~~~~~D~VfiD~~k 122 (220)
.....+.-..+...||+|+.-.+.
T Consensus 487 ~~~~~~~~~~~~~~~d~vv~~~d~ 510 (805)
T 2nvu_B 487 FNKIQDFNDTFYRQFHIIVCGLDS 510 (805)
T ss_dssp ESCGGGSCHHHHHTCSEEEECCSC
T ss_pred eccccccHHHHHhcCCEEEECCCC
Confidence 666544222223579988754443
No 446
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=90.41 E-value=0.21 Score=42.22 Aligned_cols=40 Identities=25% Similarity=0.239 Sum_probs=27.9
Q ss_pred CCCEEEEEcC-CchHHHHHH--HHHHcCCCCcEEEEEeCCchhH
Q 042616 40 NAQLIVMACS-SIAVSRTLA--LVAAARQTGGRVVCILSGVIGD 80 (220)
Q Consensus 40 ~a~~ILEIGt-g~~G~sTl~--LA~A~~~~~grV~tIE~d~~~~ 80 (220)
+++.|+-.++ |+.|-+|+. ||.++.+.+.+|.-||.| ...
T Consensus 81 ~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D-~~~ 123 (271)
T 3bfv_A 81 AVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGD-MRK 123 (271)
T ss_dssp CCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC-SSS
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCC-CCC
Confidence 4565665554 457877764 777776667899999999 654
No 447
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=90.40 E-value=0.63 Score=42.58 Aligned_cols=107 Identities=17% Similarity=0.100 Sum_probs=58.8
Q ss_pred CCEEEEEcCCchHHHHHH--HHHHcCCCCcEEEEEeCCchhHHH---HHHHHhcccCCcEEEEE----cchhhhh----h
Q 042616 41 AQLIVMACSSIAVSRTLA--LVAAARQTGGRVVCILSGVIGDID---ASKKSLGRYANCIEFVK----GDAQKLL----M 107 (220)
Q Consensus 41 a~~ILEIGtg~~G~sTl~--LA~A~~~~~grV~tIE~d~~~~~~---~Ar~~l~g~~~~Ve~v~----gda~~~L----~ 107 (220)
|..|+-+|.+++|=+|+. ||..+...+.+|.-++.| +.+.. ..+...+. ..+.++. .|+.+++ .
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D-~~R~aa~eqL~~~~~~--~gvpv~~~~~~~dp~~i~~~al~ 176 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSD-TWRPGAYHQLRQLLDR--YHIEVFGNPQEKDAIKLAKEGVD 176 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECC-CSSTHHHHHHHHHHGG--GTCEEECCTTCCCHHHHHHHHHH
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCC-CcchhHHHHHHHHHHh--cCCcEEecCCCCCHHHHHHHHHH
Confidence 567788898679999885 666666656777666666 44332 22222221 2244443 2333322 1
Q ss_pred hc-CCCccEEEEcCCCCCc---cHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 108 GD-YRGADFVLIDCNIDID---GHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 108 ~~-~~~~D~VfiD~~k~~~---~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
.. ...+|+|+||..-... .....+..+... ..|...++|.|-.
T Consensus 177 ~a~~~~~DvVIIDTaGrl~~d~~lm~el~~i~~~--~~pd~vlLVvDA~ 223 (443)
T 3dm5_A 177 YFKSKGVDIIIVDTAGRHKEDKALIEEMKQISNV--IHPHEVILVIDGT 223 (443)
T ss_dssp HHHHTTCSEEEEECCCCSSCCHHHHHHHHHHHHH--HCCSEEEEEEEGG
T ss_pred HHHhCCCCEEEEECCCcccchHHHHHHHHHHHHh--hcCceEEEEEeCC
Confidence 21 2469999999876222 122334444444 4565566666633
No 448
>3eqz_A Response regulator; structural genomics, unknown function, PSI-2, protein struct initiative; 2.15A {Colwellia psychrerythraea} SCOP: c.23.1.0
Probab=90.38 E-value=2.6 Score=29.79 Aligned_cols=68 Identities=13% Similarity=0.064 Sum_probs=47.1
Q ss_pred cEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccEEEEcCCCCCccHHHHHHHHHhh
Q 042616 68 GRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFVLIDCNIDIDGHKNVFRAAKES 137 (220)
Q Consensus 68 grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~VfiD~~k~~~~y~~~l~~l~~~ 137 (220)
-+|.-||.+ +...+..+..++.....+ ....+..+.+..+...+|+|++|......+-.+.++.+...
T Consensus 4 ~~ilivdd~-~~~~~~l~~~L~~~~~~v-~~~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~ 71 (135)
T 3eqz_A 4 NRVFIVDDD-TLTCNLLKTIVEPIFGNV-EAFQHPRAFLTLSLNKQDIIILDLMMPDMDGIEVIRHLAEH 71 (135)
T ss_dssp CEEEEECSC-HHHHHHHHHHHTTTCSCE-EEESCHHHHTTSCCCTTEEEEEECCTTTTHHHHHHHHHHHT
T ss_pred ceEEEEeCC-HHHHHHHHHHHHhhccee-eeecCHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHhC
Confidence 588999999 888888888887432233 34556666664443349999999887334556778888775
No 449
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=90.31 E-value=1 Score=32.14 Aligned_cols=68 Identities=16% Similarity=0.035 Sum_probs=46.5
Q ss_pred EEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc-CCCccEEEEcCCCCCccHHHHHHHHHhh
Q 042616 69 RVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD-YRGADFVLIDCNIDIDGHKNVFRAAKES 137 (220)
Q Consensus 69 rV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~-~~~~D~VfiD~~k~~~~y~~~l~~l~~~ 137 (220)
+|.-||.+ +...+..+..++.....+.....+..+.+..+ ..++|+|++|......+..+.++.+...
T Consensus 3 ~ilivdd~-~~~~~~l~~~L~~~g~~v~~~~~~~~~a~~~~~~~~~dlii~d~~l~~~~g~~~~~~l~~~ 71 (134)
T 3f6c_A 3 NAIIIDDH-PLAIAAIRNLLIKNDIEILAELTEGGSAVQRVETLKPDIVIIDVDIPGVNGIQVLETLRKR 71 (134)
T ss_dssp EEEEECCC-HHHHHHHHHHHHHTTEEEEEEESSSTTHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHT
T ss_pred EEEEEcCC-HHHHHHHHHHHhhCCcEEEEEcCCHHHHHHHHHhcCCCEEEEecCCCCCChHHHHHHHHhc
Confidence 67889999 88888888888733222332455555554332 2579999999887445667888888876
No 450
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=90.27 E-value=2.5 Score=31.04 Aligned_cols=69 Identities=13% Similarity=0.049 Sum_probs=48.8
Q ss_pred CcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc-CCCccEEEEcCCCCCccHHHHHHHHHhh
Q 042616 67 GGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD-YRGADFVLIDCNIDIDGHKNVFRAAKES 137 (220)
Q Consensus 67 ~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~-~~~~D~VfiD~~k~~~~y~~~l~~l~~~ 137 (220)
.-+|.-||.+ +...+..+..++...-.+. ...+..+.+..+ ..++|+|++|......+..+.++.+...
T Consensus 7 ~~~iLivdd~-~~~~~~l~~~L~~~g~~v~-~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~ 76 (154)
T 2rjn_A 7 NYTVMLVDDE-QPILNSLKRLIKRLGCNII-TFTSPLDALEALKGTSVQLVISDMRMPEMGGEVFLEQVAKS 76 (154)
T ss_dssp CCEEEEECSC-HHHHHHHHHHHHTTTCEEE-EESCHHHHHHHHTTSCCSEEEEESSCSSSCHHHHHHHHHHH
T ss_pred CCeEEEEcCC-HHHHHHHHHHHHHcCCeEE-EeCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHh
Confidence 4689999999 8888888888873222344 556666666443 3579999999876334567778888775
No 451
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=90.25 E-value=5.9 Score=34.30 Aligned_cols=77 Identities=8% Similarity=0.034 Sum_probs=49.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHH-HHHHhc--ccCCcEEEEEcchhhhhhhcCCCccE
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDA-SKKSLG--RYANCIEFVKGDAQKLLMGDYRGADF 115 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~-Ar~~l~--g~~~~Ve~v~gda~~~L~~~~~~~D~ 115 (220)
.+..+|.-||+|.+|++.+.+.. .......|+-+|.+ +++++. +..... .+...+++..++ .+.+ ...|+
T Consensus 7 ~~~~KI~IiGaG~vG~~la~~l~-~~~~~~el~L~Di~-~~~~~g~~~dl~~~~~~~~~~~i~~~~-~~a~----~~aDv 79 (326)
T 2zqz_A 7 KDHQKVILVGDGAVGSSYAYAMV-LQGIAQEIGIVDIF-KDKTKGDAIDLSNALPFTSPKKIYSAE-YSDA----KDADL 79 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHH-HHTCCSEEEEECSC-HHHHHHHHHHHHTTGGGSCCCEEEECC-GGGG----GGCSE
T ss_pred CCCCEEEEECCCHHHHHHHHHHH-cCCCCCEEEEEeCC-chHhHHHHHHHHHHHHhcCCeEEEECC-HHHh----CCCCE
Confidence 34568999999988887666543 33335689999999 777654 333222 222456666554 3323 45799
Q ss_pred EEEcCCC
Q 042616 116 VLIDCNI 122 (220)
Q Consensus 116 VfiD~~k 122 (220)
|++-+..
T Consensus 80 Vii~ag~ 86 (326)
T 2zqz_A 80 VVITAGA 86 (326)
T ss_dssp EEECCCC
T ss_pred EEEcCCC
Confidence 9998765
No 452
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=90.25 E-value=1.2 Score=38.42 Aligned_cols=58 Identities=12% Similarity=0.054 Sum_probs=40.8
Q ss_pred CCCEEEEEcCCchHHHHHH-HHHHcCCCCcEEEEEeCCch------------------hHHHHHHHHhcccC--CcEEEE
Q 042616 40 NAQLIVMACSSIAVSRTLA-LVAAARQTGGRVVCILSGVI------------------GDIDASKKSLGRYA--NCIEFV 98 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~-LA~A~~~~~grV~tIE~d~~------------------~~~~~Ar~~l~g~~--~~Ve~v 98 (220)
+..+|+-+|+|+.|...+. ||.+ . -|+++-+|.| . .+++.|++.+..+. -+|+.+
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~a-G--VG~i~lvD~D-~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~ 110 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRC-G--IGKLLLFDYD-KVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVH 110 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHH-T--CSEEEEECCC-BC------------CCTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred hCCeEEEECcCHHHHHHHHHHHHc-C--CCEEEEECCC-ccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEe
Confidence 5578999999988887664 5554 2 4899999999 6 67777888776332 345555
Q ss_pred Ecc
Q 042616 99 KGD 101 (220)
Q Consensus 99 ~gd 101 (220)
..+
T Consensus 111 ~~~ 113 (292)
T 3h8v_A 111 NYN 113 (292)
T ss_dssp CCC
T ss_pred ccc
Confidence 543
No 453
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=90.24 E-value=1.6 Score=34.40 Aligned_cols=71 Identities=18% Similarity=0.194 Sum_probs=48.6
Q ss_pred EEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccEEEEcCCC
Q 042616 43 LIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFVLIDCNI 122 (220)
Q Consensus 43 ~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~VfiD~~k 122 (220)
+||-+|+ +|+....++..+...+-+|+++..+ ++..+.. . ...++++.+|..+.-......+|.||.-+..
T Consensus 2 kilVtGa--tG~iG~~l~~~L~~~g~~V~~~~R~-~~~~~~~---~---~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 72 (224)
T 3h2s_A 2 KIAVLGA--TGRAGSAIVAEARRRGHEVLAVVRD-PQKAADR---L---GATVATLVKEPLVLTEADLDSVDAVVDALSV 72 (224)
T ss_dssp EEEEETT--TSHHHHHHHHHHHHTTCEEEEEESC-HHHHHHH---T---CTTSEEEECCGGGCCHHHHTTCSEEEECCCC
T ss_pred EEEEEcC--CCHHHHHHHHHHHHCCCEEEEEEec-ccccccc---c---CCCceEEecccccccHhhcccCCEEEECCcc
Confidence 5888884 5777777777665557899999999 7654321 1 2468999999865322223578999877644
No 454
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=90.23 E-value=0.86 Score=37.02 Aligned_cols=79 Identities=15% Similarity=0.111 Sum_probs=53.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhh--hhhc-------C
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKL--LMGD-------Y 110 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~--L~~~-------~ 110 (220)
+.+.||-.|+ +|.....+++.+.+.+.+|+.++.+ ++..+...+.++....+++++..|..+. +..+ .
T Consensus 12 ~~k~vlItGa--sggiG~~la~~l~~~G~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (260)
T 3awd_A 12 DNRVAIVTGG--AQNIGLACVTALAEAGARVIIADLD-EAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQE 88 (260)
T ss_dssp TTCEEEEETT--TSHHHHHHHHHHHHTTCEEEEEESC-HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC--CchHHHHHHHHHHHCCCEEEEEeCC-HHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 4678998884 4556666666665557899999999 7776655555543235689999886432 1111 2
Q ss_pred CCccEEEEcCC
Q 042616 111 RGADFVLIDCN 121 (220)
Q Consensus 111 ~~~D~VfiD~~ 121 (220)
+++|.||.-+.
T Consensus 89 ~~id~vi~~Ag 99 (260)
T 3awd_A 89 GRVDILVACAG 99 (260)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47899998765
No 455
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=90.09 E-value=1.9 Score=30.50 Aligned_cols=69 Identities=7% Similarity=-0.014 Sum_probs=46.4
Q ss_pred CcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc-CCCccEEEEcCCCCCccHHHHHHHHHhh
Q 042616 67 GGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD-YRGADFVLIDCNIDIDGHKNVFRAAKES 137 (220)
Q Consensus 67 ~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~-~~~~D~VfiD~~k~~~~y~~~l~~l~~~ 137 (220)
+.+|.-||.+ +...+..+..++.....+. ...++.+.+..+ ..++|+|++|......+..+.++.+...
T Consensus 7 ~~~ilivdd~-~~~~~~l~~~L~~~g~~v~-~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~ 76 (130)
T 3eod_A 7 GKQILIVEDE-QVFRSLLDSWFSSLGATTV-LAADGVDALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNR 76 (130)
T ss_dssp TCEEEEECSC-HHHHHHHHHHHHHTTCEEE-EESCHHHHHHHHTTCCCSEEEECCC-----CHHHHHHHHHT
T ss_pred CCeEEEEeCC-HHHHHHHHHHHHhCCceEE-EeCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhc
Confidence 5689999999 8888888888873322343 366777766544 3579999999876324456777877775
No 456
>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} SCOP: a.24.13.1 a.36.1.1 c.37.1.10 PDB: 2iy3_A
Probab=90.09 E-value=0.65 Score=42.22 Aligned_cols=106 Identities=13% Similarity=0.081 Sum_probs=58.2
Q ss_pred CCEEEEEcCCchHHHHHH--HHHHcCCCCcEEEEEeCCchhHHHHHH---HHhcccCCcEEEEEc----chhhh----hh
Q 042616 41 AQLIVMACSSIAVSRTLA--LVAAARQTGGRVVCILSGVIGDIDASK---KSLGRYANCIEFVKG----DAQKL----LM 107 (220)
Q Consensus 41 a~~ILEIGtg~~G~sTl~--LA~A~~~~~grV~tIE~d~~~~~~~Ar---~~l~g~~~~Ve~v~g----da~~~----L~ 107 (220)
++.|+-+|.+++|-+|+. ||..+.+.+++|.-++.| ........ ...+. .++.++.. ++.++ +.
T Consensus 98 ~~vi~i~G~~GsGKTT~~~~LA~~l~~~g~~Vllvd~D-~~r~aa~~qL~~~~~~--~gv~v~~~~~~~~p~~i~~~~l~ 174 (425)
T 2ffh_A 98 RNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAAD-TQRPAAREQLRLLGEK--VGVPVLEVMDGESPESIRRRVEE 174 (425)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECC-SSCHHHHHHHHHHHHH--HTCCEEECCTTCCHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEeecc-ccCchhHHHHHHhccc--CCccEEecCCCCCHHHHHHHHHH
Confidence 455666787678998875 777676668899888888 65543322 11111 12333332 33332 32
Q ss_pred hc-CCCccEEEEcCCCCCccHHHHH---HHHHhhcCCCCCCEEEEEec
Q 042616 108 GD-YRGADFVLIDCNIDIDGHKNVF---RAAKESVMHGSGAGVIVGYN 151 (220)
Q Consensus 108 ~~-~~~~D~VfiD~~k~~~~y~~~l---~~l~~~~~L~~~Ggviv~dN 151 (220)
.+ ...||+|+||++.......... ..+... +.|...++|.|-
T Consensus 175 ~~~~~~~DvVIIDTaG~l~~d~~l~~el~~i~~~--~~pd~vlLVvDa 220 (425)
T 2ffh_A 175 KARLEARDLILVDTAGRLQIDEPLMGELARLKEV--LGPDEVLLVLDA 220 (425)
T ss_dssp HHHHTTCSEEEEECCCCSSCCHHHHHHHHHHHHH--HCCSEEEEEEEG
T ss_pred HHHHCCCCEEEEcCCCcccccHHHHHHHHHhhhc--cCCceEEEEEec
Confidence 22 2679999999876222222233 333443 346455666663
No 457
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=90.07 E-value=0.58 Score=37.57 Aligned_cols=32 Identities=13% Similarity=0.034 Sum_probs=25.9
Q ss_pred EcCCchHHHHHH--HHHHcCCCCcEEEEEeCCchh
Q 042616 47 ACSSIAVSRTLA--LVAAARQTGGRVVCILSGVIG 79 (220)
Q Consensus 47 IGtg~~G~sTl~--LA~A~~~~~grV~tIE~d~~~ 79 (220)
-|-|++|-||+. ||.++...|.+|.-||.| ++
T Consensus 6 s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D-~~ 39 (254)
T 3kjh_A 6 AGKGGVGKTTVAAGLIKIMASDYDKIYAVDGD-PD 39 (254)
T ss_dssp ECSSSHHHHHHHHHHHHHHTTTCSCEEEEEEC-TT
T ss_pred ecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCC-CC
Confidence 566779999886 777777767899999999 74
No 458
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=90.07 E-value=0.87 Score=37.04 Aligned_cols=81 Identities=16% Similarity=0.106 Sum_probs=55.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhh--hhhc-------
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKL--LMGD------- 109 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~--L~~~------- 109 (220)
.+.+.+|-.|+ +|.....+|+.+.+.+.+|+.++.+ ++.++...+.+.....++.++..|..+. +..+
T Consensus 7 ~~~k~vlITGa--s~giG~~~a~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (253)
T 3qiv_A 7 FENKVGIVTGS--GGGIGQAYAEALAREGAAVVVADIN-AEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE 83 (253)
T ss_dssp TTTCEEEEETT--TSHHHHHHHHHHHHTTCEEEEEESC-HHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECC--CChHHHHHHHHHHHCCCEEEEEcCC-HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 35678898885 3444556666655558899999999 8887777666653336788999887542 1111
Q ss_pred CCCccEEEEcCCC
Q 042616 110 YRGADFVLIDCNI 122 (220)
Q Consensus 110 ~~~~D~VfiD~~k 122 (220)
.+++|.++..+..
T Consensus 84 ~g~id~li~~Ag~ 96 (253)
T 3qiv_A 84 FGGIDYLVNNAAI 96 (253)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 2579999987753
No 459
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=90.06 E-value=4.3 Score=36.33 Aligned_cols=127 Identities=14% Similarity=0.118 Sum_probs=71.9
Q ss_pred CCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEc-
Q 042616 22 RGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKG- 100 (220)
Q Consensus 22 ~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~g- 100 (220)
+.-.|...+|-..+++..+....+-+++| +....+.+...+.+ +.+|++-++.=.......+..+....-++.++..
T Consensus 78 r~~~p~~~~le~~lA~l~g~~~~v~~~sG-~~Ai~~al~al~~~-Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~ 155 (430)
T 3ri6_A 78 RSSNPTVEDLEQRLKNLTGALGVLALGSG-MAAISTAILTLARA-GDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVM 155 (430)
T ss_dssp --CCHHHHHHHHHHHHHHTCSEEEEESCH-HHHHHHHHHHHCCT-TCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTT
T ss_pred CCCCHHHHHHHHHHHHHHCCCcEEEECCH-HHHHHHHHHHHhCC-CCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC
Confidence 45668888999999998888877666543 33333333333444 7788887776223333333333322223444443
Q ss_pred chhhhhhhcCCCccEEEEcCCCCC----ccHHHHHHHHHhhcCCCCCCEEEEEecCCCCC
Q 042616 101 DAQKLLMGDYRGADFVLIDCNIDI----DGHKNVFRAAKESVMHGSGAGVIVGYNALPKG 156 (220)
Q Consensus 101 da~~~L~~~~~~~D~VfiD~~k~~----~~y~~~l~~l~~~~~L~~~Ggviv~dNv~~~g 156 (220)
|..++...+.....+|++..+... .+..++.+.+.+ .|.++|+||+...+
T Consensus 156 d~~~l~~ai~~~t~~v~~e~p~NptG~~~dl~~i~~la~~------~g~~livD~a~~~~ 209 (430)
T 3ri6_A 156 DSLAVEHACDETTKLLFLETISNPQLQVADLEALSKVVHA------KGIPLVVDTTMTPP 209 (430)
T ss_dssp CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHT------TTCCEEEECTTSCT
T ss_pred CHHHHHHhhCCCCeEEEEECCCCCCCeecCHHHHHHHHHH------cCCEEEEECCCccc
Confidence 444443333456789998765411 233444444433 48999999998654
No 460
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=90.05 E-value=6.4 Score=33.74 Aligned_cols=103 Identities=13% Similarity=0.083 Sum_probs=60.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHH-HHHHhcc---cCCcEEEEEcchhhhhhhcCCCccE
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDA-SKKSLGR---YANCIEFVKGDAQKLLMGDYRGADF 115 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~-Ar~~l~g---~~~~Ve~v~gda~~~L~~~~~~~D~ 115 (220)
+..+|.-||+|.+|++-+... +.....++|+-+|.+ ++.++. +...... +...+++..++. +. ....|+
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l-~~~~~~~ev~l~Di~-~~~~~~~~~dl~~~~~~~~~~~~i~~~~~-~a----l~~aDv 77 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFAL-MNQGIADEIVLIDAN-ESKAIGDAMDFNHGKVFAPKPVDIWHGDY-DD----CRDADL 77 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHH-HHHTCCSEEEEECSS-HHHHHHHHHHHHHHTTSSSSCCEEEECCG-GG----TTTCSE
T ss_pred CCCEEEEECcCHHHHHHHHHH-HhCCCCCEEEEEeCC-cchHHHHHhhHHHHhhhcCCCeEEEcCcH-HH----hCCCCE
Confidence 457899999988887654433 333335699999999 765553 2332221 112455555443 32 346899
Q ss_pred EEEcCCCCC--------------ccHHHHHHHHHhhcCCCCCCEEEEEecC
Q 042616 116 VLIDCNIDI--------------DGHKNVFRAAKESVMHGSGAGVIVGYNA 152 (220)
Q Consensus 116 VfiD~~k~~--------------~~y~~~l~~l~~~~~L~~~Ggviv~dNv 152 (220)
|++-++... .-..++.+.+.+. . |++-++++-|-
T Consensus 78 Viia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~--~-p~a~~iv~tNP 125 (316)
T 1ldn_A 78 VVICAGANQKPGETRLDLVDKNIAIFRSIVESVMAS--G-FQGLFLVATNP 125 (316)
T ss_dssp EEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHH--T-CCSEEEECSSS
T ss_pred EEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHH--C-CCCEEEEeCCc
Confidence 999865521 1124556666666 2 64555665553
No 461
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=90.03 E-value=0.84 Score=37.84 Aligned_cols=80 Identities=16% Similarity=0.183 Sum_probs=53.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc--ccCCcEEEEEcchhhh--hhhc-----
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG--RYANCIEFVKGDAQKL--LMGD----- 109 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~--g~~~~Ve~v~gda~~~--L~~~----- 109 (220)
.+.+.+|-.|+ +|.....+++.+.+.+.+|+.++.+ ++.++...+.+. +...++.++.+|..+. +..+
T Consensus 30 l~~k~vlVTGa--sggIG~~la~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 106 (279)
T 1xg5_A 30 WRDRLALVTGA--SGGIGAAVARALVQQGLKVVGCART-VGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR 106 (279)
T ss_dssp GTTCEEEEEST--TSHHHHHHHHHHHHTTCEEEEEESC-HHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEECC--CchHHHHHHHHHHHCCCEEEEEECC-hHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence 35688998884 4555666666555557899999999 877766655554 4345688888886432 1111
Q ss_pred --CCCccEEEEcCC
Q 042616 110 --YRGADFVLIDCN 121 (220)
Q Consensus 110 --~~~~D~VfiD~~ 121 (220)
.+++|.||.-+.
T Consensus 107 ~~~g~iD~vi~~Ag 120 (279)
T 1xg5_A 107 SQHSGVDICINNAG 120 (279)
T ss_dssp HHHCCCSEEEECCC
T ss_pred HhCCCCCEEEECCC
Confidence 247999997765
No 462
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=90.01 E-value=2.2 Score=31.39 Aligned_cols=69 Identities=12% Similarity=0.070 Sum_probs=49.2
Q ss_pred CcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc-CCCccEEEEcCCCCCccHHHHHHHHHhh
Q 042616 67 GGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD-YRGADFVLIDCNIDIDGHKNVFRAAKES 137 (220)
Q Consensus 67 ~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~-~~~~D~VfiD~~k~~~~y~~~l~~l~~~ 137 (220)
..+|.-||.+ +...+..+..++...-.|. ...+..+.+..+ ..++|+|++|......+..+.++.+...
T Consensus 14 ~~~ILivdd~-~~~~~~l~~~L~~~g~~v~-~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~ 83 (153)
T 3hv2_A 14 RPEILLVDSQ-EVILQRLQQLLSPLPYTLH-FARDATQALQLLASREVDLVISAAHLPQMDGPTLLARIHQQ 83 (153)
T ss_dssp CCEEEEECSC-HHHHHHHHHHHTTSSCEEE-EESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHH
T ss_pred CceEEEECCC-HHHHHHHHHHhcccCcEEE-EECCHHHHHHHHHcCCCCEEEEeCCCCcCcHHHHHHHHHhH
Confidence 4689999999 8888888888873322343 456666665433 3579999999877435667788888776
No 463
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=89.96 E-value=9.4 Score=33.69 Aligned_cols=125 Identities=18% Similarity=0.084 Sum_probs=72.6
Q ss_pred CCCChhHHHHHHHHHhhCCCCEEEEEcCCchHHHHHHHH-HHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEc
Q 042616 22 RGKEPDVGEFISALAAGNNAQLIVMACSSIAVSRTLALV-AAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKG 100 (220)
Q Consensus 22 ~~~~p~~~~~L~~La~~~~a~~ILEIGtg~~G~sTl~LA-~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~g 100 (220)
+.-.|...+|-..+++..+...++-.++ |..++.++ .++-..+.+|++.++.=.......+..+....-++.++..
T Consensus 77 r~~~p~~~~l~~~la~~~g~~~~~~~~s---G~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~ 153 (414)
T 3ndn_A 77 RYGNPTVSVFEERLRLIEGAPAAFATAS---GMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDG 153 (414)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEESS---HHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT
T ss_pred CCCChHHHHHHHHHHHHHCCCcEEEECC---HHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCC
Confidence 4566888888888988888888876653 44444432 2333337788888776233334444433322224444443
Q ss_pred -chhhhhhhcCCCccEEEEcCCCCC----ccHHHHHHHHHhhcCCCCCCEEEEEecCCCC
Q 042616 101 -DAQKLLMGDYRGADFVLIDCNIDI----DGHKNVFRAAKESVMHGSGAGVIVGYNALPK 155 (220)
Q Consensus 101 -da~~~L~~~~~~~D~VfiD~~k~~----~~y~~~l~~l~~~~~L~~~Ggviv~dNv~~~ 155 (220)
|..++...+.....+|++..+... .+..++.+.+.+ .|.+||+|++...
T Consensus 154 ~d~~~l~~ai~~~t~~v~le~p~NptG~~~~l~~i~~la~~------~g~~livDe~~~~ 207 (414)
T 3ndn_A 154 DDLSQWERALSVPTQAVFFETPSNPMQSLVDIAAVTELAHA------AGAKVVLDNVFAT 207 (414)
T ss_dssp TCHHHHHHHTSSCCSEEEEESSCTTTCCCCCHHHHHHHHHH------TTCEEEEECTTTH
T ss_pred CCHHHHHHhcCCCCeEEEEECCCCCCCccccHHHHHHHHHH------cCCEEEEECCCcc
Confidence 444433333456789998665411 233444444443 4899999999753
No 464
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=89.83 E-value=0.91 Score=36.05 Aligned_cols=87 Identities=15% Similarity=0.119 Sum_probs=54.1
Q ss_pred CEEEEEcCCchHHHHHHHHHHcC-CCCcEEEEEeCCchh-HHHHHHHHhcccCCcEEEEEcchhh--hhhhcCCCccEEE
Q 042616 42 QLIVMACSSIAVSRTLALVAAAR-QTGGRVVCILSGVIG-DIDASKKSLGRYANCIEFVKGDAQK--LLMGDYRGADFVL 117 (220)
Q Consensus 42 ~~ILEIGtg~~G~sTl~LA~A~~-~~~grV~tIE~d~~~-~~~~Ar~~l~g~~~~Ve~v~gda~~--~L~~~~~~~D~Vf 117 (220)
++||-+|. +|.....+++.+. ..+-+|+.+..+ ++ .++... . ...+++++.+|..+ .+......+|.||
T Consensus 6 k~vlVtGa--sg~iG~~~~~~l~~~~g~~V~~~~r~-~~~~~~~~~---~-~~~~~~~~~~D~~d~~~~~~~~~~~d~vv 78 (221)
T 3r6d_A 6 XYITILGA--AGQIAQXLTATLLTYTDMHITLYGRQ-LKTRIPPEI---I-DHERVTVIEGSFQNPGXLEQAVTNAEVVF 78 (221)
T ss_dssp SEEEEEST--TSHHHHHHHHHHHHHCCCEEEEEESS-HHHHSCHHH---H-TSTTEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred EEEEEEeC--CcHHHHHHHHHHHhcCCceEEEEecC-ccccchhhc---c-CCCceEEEECCCCCHHHHHHHHcCCCEEE
Confidence 56898883 4555556665554 347899999999 66 443222 1 12568999998854 2333346789999
Q ss_pred EcCCCCCccH--HHHHHHHHhh
Q 042616 118 IDCNIDIDGH--KNVFRAAKES 137 (220)
Q Consensus 118 iD~~k~~~~y--~~~l~~l~~~ 137 (220)
.-+.. .+. ...++.+.+.
T Consensus 79 ~~ag~--~n~~~~~~~~~~~~~ 98 (221)
T 3r6d_A 79 VGAME--SGSDMASIVKALSRX 98 (221)
T ss_dssp ESCCC--CHHHHHHHHHHHHHT
T ss_pred EcCCC--CChhHHHHHHHHHhc
Confidence 88876 333 3344444443
No 465
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=89.81 E-value=0.65 Score=40.33 Aligned_cols=97 Identities=13% Similarity=0.085 Sum_probs=53.9
Q ss_pred hhCCCCEEEEEcC-CchHHHHHHHHHHcCCCCcEE-EEEeCCchh---HHHHHHHHhcccCCcEEEEEcch--hhhhhhc
Q 042616 37 AGNNAQLIVMACS-SIAVSRTLALVAAARQTGGRV-VCILSGVIG---DIDASKKSLGRYANCIEFVKGDA--QKLLMGD 109 (220)
Q Consensus 37 ~~~~a~~ILEIGt-g~~G~sTl~LA~A~~~~~grV-~tIE~d~~~---~~~~Ar~~l~g~~~~Ve~v~gda--~~~L~~~ 109 (220)
...+.++||-+|+ |++|..++.||+++ +.++ ++++.+ +. ..+.+++. |. +. ++..+- .+.+..+
T Consensus 164 ~~~~g~~VlV~Ga~G~vG~~aiqlak~~---Ga~vi~~~~~~-~~~~~~~~~~~~l--Ga-~~--vi~~~~~~~~~~~~~ 234 (357)
T 1zsy_A 164 QLQPGDSVIQNASNSGVGQAVIQIAAAL---GLRTINVVRDR-PDIQKLSDRLKSL--GA-EH--VITEEELRRPEMKNF 234 (357)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHH---TCEEEEEECCC-SCHHHHHHHHHHT--TC-SE--EEEHHHHHSGGGGGT
T ss_pred ccCCCCEEEEeCCcCHHHHHHHHHHHHc---CCEEEEEecCc-cchHHHHHHHHhc--CC-cE--EEecCcchHHHHHHH
Confidence 3456789999996 88999999999875 5555 455555 43 34455432 32 22 222211 0112222
Q ss_pred -C--CCccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEEec
Q 042616 110 -Y--RGADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVGYN 151 (220)
Q Consensus 110 -~--~~~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~dN 151 (220)
. ..+|+|| |+-- .. . +..+.+. |++ ||.++.-.
T Consensus 235 ~~~~~~~Dvvi-d~~g--~~--~-~~~~~~~--l~~-~G~iv~~G 270 (357)
T 1zsy_A 235 FKDMPQPRLAL-NCVG--GK--S-STELLRQ--LAR-GGTMVTYG 270 (357)
T ss_dssp TSSSCCCSEEE-ESSC--HH--H-HHHHHTT--SCT-TCEEEECC
T ss_pred HhCCCCceEEE-ECCC--cH--H-HHHHHHh--hCC-CCEEEEEe
Confidence 1 2589876 5544 22 2 2345666 765 77777654
No 466
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=89.74 E-value=0.96 Score=37.46 Aligned_cols=80 Identities=3% Similarity=0.003 Sum_probs=54.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhh------hhh---cC
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKL------LMG---DY 110 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~------L~~---~~ 110 (220)
..+.||-.|+ +|.....++..+.+.+.+|+.++.+ ++..+...+.++....+++++..|..+. +.. ..
T Consensus 30 ~~k~vlITGa--sggIG~~la~~L~~~G~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 106 (272)
T 1yb1_A 30 TGEIVLITGA--GHGIGRLTAYEFAKLKSKLVLWDIN-KHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI 106 (272)
T ss_dssp TTCEEEEETT--TSHHHHHHHHHHHHTTCEEEEEESC-HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECC--CchHHHHHHHHHHHCCCEEEEEEcC-HHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 4578998884 4555666666665558899999999 7777666665553335789999886432 111 13
Q ss_pred CCccEEEEcCCC
Q 042616 111 RGADFVLIDCNI 122 (220)
Q Consensus 111 ~~~D~VfiD~~k 122 (220)
+++|.|+-.+..
T Consensus 107 g~iD~li~~Ag~ 118 (272)
T 1yb1_A 107 GDVSILVNNAGV 118 (272)
T ss_dssp CCCSEEEECCCC
T ss_pred CCCcEEEECCCc
Confidence 579999987754
No 467
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=89.74 E-value=8.3 Score=33.09 Aligned_cols=73 Identities=11% Similarity=0.023 Sum_probs=43.1
Q ss_pred EEEEEcC-CchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccC-CcEEEEEc--chhhhhhhcCCCccEEEE
Q 042616 43 LIVMACS-SIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYA-NCIEFVKG--DAQKLLMGDYRGADFVLI 118 (220)
Q Consensus 43 ~ILEIGt-g~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~-~~Ve~v~g--da~~~L~~~~~~~D~Vfi 118 (220)
+|.-||+ |.+|+..+.+. +.......|+.+|.+ + ....+....+... .+++...+ |..+.+ ...|+||+
T Consensus 2 KI~IiGa~G~VG~~la~~L-~~~~~~~ev~L~Di~-~-~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~----~~aDvVvi 74 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLL-KNSPLVSRLTLYDIA-H-TPGVAADLSHIETRATVKGYLGPEQLPDCL----KGCDVVVI 74 (314)
T ss_dssp EEEEETTTSTTHHHHHHHH-HTCTTCSEEEEEESS-S-HHHHHHHHTTSSSSCEEEEEESGGGHHHHH----TTCSEEEE
T ss_pred EEEEECCCChHHHHHHHHH-HhCCCCcEEEEEeCC-c-cHHHHHHHhccCcCceEEEecCCCCHHHHh----CCCCEEEE
Confidence 5888997 88888755443 222112589999999 6 3233333222221 24555544 445444 45799999
Q ss_pred cCCC
Q 042616 119 DCNI 122 (220)
Q Consensus 119 D~~k 122 (220)
-+..
T Consensus 75 ~ag~ 78 (314)
T 1mld_A 75 PAGV 78 (314)
T ss_dssp CCSC
T ss_pred CCCc
Confidence 7754
No 468
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=89.70 E-value=1.3 Score=37.42 Aligned_cols=81 Identities=10% Similarity=0.118 Sum_probs=53.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCC---cEEEEEcchhhh------hhhc
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYAN---CIEFVKGDAQKL------LMGD 109 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~---~Ve~v~gda~~~------L~~~ 109 (220)
.+.+.+|-.|. +|.....+++.+...|.+|+.++.+ ++.++...+.+..... ++.++..|..+. +...
T Consensus 24 l~~k~vlVTGa--s~gIG~aia~~L~~~G~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 100 (297)
T 1xhl_A 24 FSGKSVIITGS--SNGIGRSAAVIFAKEGAQVTITGRN-EDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTT 100 (297)
T ss_dssp CTTCEEEETTC--SSHHHHHHHHHHHHTTCEEEEEESC-HHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCEEEEeCC--CcHHHHHHHHHHHHCCCEEEEEeCC-HHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHH
Confidence 35678888774 3445556666555558899999999 8777666555542223 788998886432 1111
Q ss_pred ---CCCccEEEEcCCC
Q 042616 110 ---YRGADFVLIDCNI 122 (220)
Q Consensus 110 ---~~~~D~VfiD~~k 122 (220)
.+++|.+|..+..
T Consensus 101 ~~~~g~iD~lvnnAG~ 116 (297)
T 1xhl_A 101 LAKFGKIDILVNNAGA 116 (297)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHhcCCCCEEEECCCc
Confidence 2579999987753
No 469
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=89.63 E-value=0.3 Score=40.10 Aligned_cols=29 Identities=24% Similarity=0.142 Sum_probs=21.4
Q ss_pred CchHHHHHH--HHHHcCCCCcEEEEEeCCchh
Q 042616 50 SIAVSRTLA--LVAAARQTGGRVVCILSGVIG 79 (220)
Q Consensus 50 g~~G~sTl~--LA~A~~~~~grV~tIE~d~~~ 79 (220)
|++|-+|+. ||.++...+.+|.-||.| +.
T Consensus 12 gGvGKTt~a~~LA~~la~~g~~VlliD~D-~~ 42 (263)
T 1hyq_A 12 GGTGKTTITANLGVALAQLGHDVTIVDAD-IT 42 (263)
T ss_dssp SCSCHHHHHHHHHHHHHHTTCCEEEEECC-CS
T ss_pred CCCCHHHHHHHHHHHHHhCCCcEEEEECC-CC
Confidence 557877765 676666557799999999 64
No 470
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=89.61 E-value=1.8 Score=36.09 Aligned_cols=93 Identities=10% Similarity=0.040 Sum_probs=54.9
Q ss_pred CCCEEEEEcCCchHHHHHH-HHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccEEEE
Q 042616 40 NAQLIVMACSSIAVSRTLA-LVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFVLI 118 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~-LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~Vfi 118 (220)
+..+|.-||+|..|..-.. |+.+ .. +-+|+.+|++ ++..+.+++. +..+ ....+..+.+ ...|+||+
T Consensus 5 ~~~~I~iIG~G~mG~~~a~~l~~~-g~-~~~V~~~d~~-~~~~~~~~~~--g~~~---~~~~~~~~~~----~~aDvVil 72 (290)
T 3b1f_A 5 EEKTIYIAGLGLIGASLALGIKRD-HP-HYKIVGYNRS-DRSRDIALER--GIVD---EATADFKVFA----ALADVIIL 72 (290)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-CT-TSEEEEECSS-HHHHHHHHHT--TSCS---EEESCTTTTG----GGCSEEEE
T ss_pred ccceEEEEeeCHHHHHHHHHHHhC-CC-CcEEEEEcCC-HHHHHHHHHc--CCcc---cccCCHHHhh----cCCCEEEE
Confidence 4567988998755554322 3322 11 3589999999 8877665541 3211 1233433433 35799999
Q ss_pred cCCCCCccHHHHHHHHHhhcCCCCCCEEEE
Q 042616 119 DCNIDIDGHKNVFRAAKESVMHGSGAGVIV 148 (220)
Q Consensus 119 D~~k~~~~y~~~l~~l~~~~~L~~~Ggviv 148 (220)
-.+. ....++++.+.+.+ + ++|.+|+
T Consensus 73 avp~--~~~~~v~~~l~~~~-l-~~~~ivi 98 (290)
T 3b1f_A 73 AVPI--KKTIDFIKILADLD-L-KEDVIIT 98 (290)
T ss_dssp CSCH--HHHHHHHHHHHTSC-C-CTTCEEE
T ss_pred cCCH--HHHHHHHHHHHhcC-C-CCCCEEE
Confidence 8877 66677777776531 2 3466555
No 471
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=89.56 E-value=0.88 Score=37.43 Aligned_cols=80 Identities=11% Similarity=0.190 Sum_probs=55.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhh------hhhc---
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKL------LMGD--- 109 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~------L~~~--- 109 (220)
.+.+.+|-.|. +|.....+|+.+.+.|.+|+.++.+ ++.++.+.+.++....++.++..|..+. +...
T Consensus 4 l~~k~vlVTGa--s~gIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (257)
T 3imf_A 4 MKEKVVIITGG--SSGMGKGMATRFAKEGARVVITGRT-KEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEK 80 (257)
T ss_dssp TTTCEEEETTT--TSHHHHHHHHHHHHTTCEEEEEESC-HHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECC--CCHHHHHHHHHHHHCCCEEEEEeCC-HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 35678888874 3444555555555558899999999 8888877777764446799999886432 1111
Q ss_pred CCCccEEEEcCC
Q 042616 110 YRGADFVLIDCN 121 (220)
Q Consensus 110 ~~~~D~VfiD~~ 121 (220)
.+++|.++..+.
T Consensus 81 ~g~id~lv~nAg 92 (257)
T 3imf_A 81 FGRIDILINNAA 92 (257)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 257999998765
No 472
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=89.52 E-value=1 Score=38.52 Aligned_cols=97 Identities=15% Similarity=0.029 Sum_probs=56.5
Q ss_pred CEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHH-h--cc-cCCcEEE----EEcchhhhhhhcCCCc
Q 042616 42 QLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKS-L--GR-YANCIEF----VKGDAQKLLMGDYRGA 113 (220)
Q Consensus 42 ~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~-l--~g-~~~~Ve~----v~gda~~~L~~~~~~~ 113 (220)
.+|.-||+|..|..-. ..+.+.+-.|+-++.+ + . +..++. + .. ....+.+ ...+..+ ....+
T Consensus 3 mkI~IiGaGaiG~~~a---~~L~~~g~~V~~~~r~-~-~-~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~----~~~~~ 72 (320)
T 3i83_A 3 LNILVIGTGAIGSFYG---ALLAKTGHCVSVVSRS-D-Y-ETVKAKGIRIRSATLGDYTFRPAAVVRSAAE----LETKP 72 (320)
T ss_dssp CEEEEESCCHHHHHHH---HHHHHTTCEEEEECST-T-H-HHHHHHCEEEEETTTCCEEECCSCEESCGGG----CSSCC
T ss_pred CEEEEECcCHHHHHHH---HHHHhCCCeEEEEeCC-h-H-HHHHhCCcEEeecCCCcEEEeeeeeECCHHH----cCCCC
Confidence 4788899876665322 2222225589999998 6 2 444432 2 12 2223333 1223222 22479
Q ss_pred cEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEE-EecCC
Q 042616 114 DFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIV-GYNAL 153 (220)
Q Consensus 114 D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv-~dNv~ 153 (220)
|+||+-.+. ....+.++.+.+. +.+ +.+|| .-|-+
T Consensus 73 DlVilavK~--~~~~~~l~~l~~~--l~~-~t~Iv~~~nGi 108 (320)
T 3i83_A 73 DCTLLCIKV--VEGADRVGLLRDA--VAP-DTGIVLISNGI 108 (320)
T ss_dssp SEEEECCCC--CTTCCHHHHHTTS--CCT-TCEEEEECSSS
T ss_pred CEEEEecCC--CChHHHHHHHHhh--cCC-CCEEEEeCCCC
Confidence 999998877 6677889999988 765 55544 44444
No 473
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=89.51 E-value=1.9 Score=31.00 Aligned_cols=69 Identities=12% Similarity=0.059 Sum_probs=48.4
Q ss_pred CcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc-CCCccEEEEcCCCCC--ccHHHHHHHHHhh
Q 042616 67 GGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD-YRGADFVLIDCNIDI--DGHKNVFRAAKES 137 (220)
Q Consensus 67 ~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~-~~~~D~VfiD~~k~~--~~y~~~l~~l~~~ 137 (220)
..+|.-||.+ +...+..+..++...-.+. ...++.+.+..+ ..++|+||+|..... .+-.+.++.+...
T Consensus 6 ~~~ilivdd~-~~~~~~l~~~L~~~g~~v~-~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~~~g~~~~~~l~~~ 77 (136)
T 3kto_A 6 HPIIYLVDHQ-KDARAALSKLLSPLDVTIQ-CFASAESFMRQQISDDAIGMIIEAHLEDKKDSGIELLETLVKR 77 (136)
T ss_dssp -CEEEEECSC-HHHHHHHHHHHTTSSSEEE-EESSHHHHTTSCCCTTEEEEEEETTGGGBTTHHHHHHHHHHHT
T ss_pred CCeEEEEcCC-HHHHHHHHHHHHHCCcEEE-EeCCHHHHHHHHhccCCCEEEEeCcCCCCCccHHHHHHHHHhC
Confidence 3589999999 8888888888873222344 566777777544 357999999988732 3346677777765
No 474
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=89.47 E-value=3.5 Score=30.14 Aligned_cols=68 Identities=10% Similarity=0.064 Sum_probs=47.3
Q ss_pred CcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc--CCCccEEEEcCCCCCccHHHHHHHHHhh
Q 042616 67 GGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD--YRGADFVLIDCNIDIDGHKNVFRAAKES 137 (220)
Q Consensus 67 ~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~--~~~~D~VfiD~~k~~~~y~~~l~~l~~~ 137 (220)
.-+|.-||.+ +...+..+..++. .-.|. ...+..+.+..+ ..+||+|++|......+..+.++.+...
T Consensus 4 ~~~ILivdd~-~~~~~~l~~~L~~-~~~v~-~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~ 73 (151)
T 3kcn_A 4 NERILLVDDD-YSLLNTLKRNLSF-DFEVT-TCESGPEALACIKKSDPFSVIMVDMRMPGMEGTEVIQKARLI 73 (151)
T ss_dssp CCEEEEECSC-HHHHHHHHHHHTT-TSEEE-EESSHHHHHHHHHHSCCCSEEEEESCCSSSCHHHHHHHHHHH
T ss_pred CCeEEEEeCC-HHHHHHHHHHhcc-CceEE-EeCCHHHHHHHHHcCCCCCEEEEeCCCCCCcHHHHHHHHHhc
Confidence 3589999999 8888888887762 12333 455666665433 3458999999886445667788888876
No 475
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=89.47 E-value=2.7 Score=30.77 Aligned_cols=70 Identities=13% Similarity=0.058 Sum_probs=48.6
Q ss_pred CcEEEEEeCCchhHHHHHHHHhcc-cCCcEEEEEcchhhhhhhc-CCCccEEEEcCCCCCccHHHHHHHHHhh
Q 042616 67 GGRVVCILSGVIGDIDASKKSLGR-YANCIEFVKGDAQKLLMGD-YRGADFVLIDCNIDIDGHKNVFRAAKES 137 (220)
Q Consensus 67 ~grV~tIE~d~~~~~~~Ar~~l~g-~~~~Ve~v~gda~~~L~~~-~~~~D~VfiD~~k~~~~y~~~l~~l~~~ 137 (220)
.-+|.-||.+ +...+..+..++. ..-.+.....+..+.+..+ ...+|+|++|......+..+.++.+...
T Consensus 5 ~~~ILivdd~-~~~~~~l~~~L~~~~~~~v~~~~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~ 76 (153)
T 3cz5_A 5 TARIMLVDDH-PIVREGYRRLIERRPGYAVVAEAADAGEAYRLYRETTPDIVVMDLTLPGPGGIEATRHIRQW 76 (153)
T ss_dssp CEEEEEECSC-HHHHHHHHHHHTTSTTEEEEEEESSHHHHHHHHHTTCCSEEEECSCCSSSCHHHHHHHHHHH
T ss_pred ccEEEEECCc-HHHHHHHHHHHhhCCCcEEEEEeCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHh
Confidence 4588999999 8888888888864 2222333566777666433 3579999999876334567778888776
No 476
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=89.39 E-value=1.5 Score=37.66 Aligned_cols=94 Identities=14% Similarity=0.175 Sum_probs=56.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHH-hc-ccCCcEEE-----EEcchhhhhhhcCCC
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKS-LG-RYANCIEF-----VKGDAQKLLMGDYRG 112 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~-l~-g~~~~Ve~-----v~gda~~~L~~~~~~ 112 (220)
...+|.-||+|..|..- |..+...+-.|+.+ .+ ++.++..++. +. .. ...++ ...+..+ ...
T Consensus 18 ~~~kI~IiGaGa~G~~~---a~~L~~~G~~V~l~-~~-~~~~~~i~~~g~~~~~-~~~~~~~~~~~~~~~~~-----~~~ 86 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYY---GGMLARAGHEVILI-AR-PQHVQAIEATGLRLET-QSFDEQVKVSASSDPSA-----VQG 86 (318)
T ss_dssp --CEEEEESCSHHHHHH---HHHHHHTTCEEEEE-CC-HHHHHHHHHHCEEEEC-SSCEEEECCEEESCGGG-----GTT
T ss_pred cCCcEEEECcCHHHHHH---HHHHHHCCCeEEEE-Ec-HhHHHHHHhCCeEEEc-CCCcEEEeeeeeCCHHH-----cCC
Confidence 45789999987666432 22222225578888 88 8877776653 11 11 11111 1122222 257
Q ss_pred ccEEEEcCCCCCccHHHHHHHHHhhcCCCCCCEEEEE
Q 042616 113 ADFVLIDCNIDIDGHKNVFRAAKESVMHGSGAGVIVG 149 (220)
Q Consensus 113 ~D~VfiD~~k~~~~y~~~l~~l~~~~~L~~~Ggviv~ 149 (220)
+|+||+-.+. ....+.++.+.+. +.+ +.+||.
T Consensus 87 ~D~vilavk~--~~~~~~l~~l~~~--l~~-~~~iv~ 118 (318)
T 3hwr_A 87 ADLVLFCVKS--TDTQSAALAMKPA--LAK-SALVLS 118 (318)
T ss_dssp CSEEEECCCG--GGHHHHHHHHTTT--SCT-TCEEEE
T ss_pred CCEEEEEccc--ccHHHHHHHHHHh--cCC-CCEEEE
Confidence 8999998877 6778899999988 755 666553
No 477
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=89.39 E-value=3.8 Score=35.42 Aligned_cols=85 Identities=14% Similarity=-0.022 Sum_probs=51.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCC-CCcEEEE-EeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccEEE
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQ-TGGRVVC-ILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFVL 117 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~-~~grV~t-IE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~Vf 117 (220)
+..+|.-||+|..|... ++.++.. .+-+|++ .|++ ++.++...+.+ + +... .|..+++.. ..+|+|+
T Consensus 26 ~~~rigiIG~G~~g~~~--~~~~l~~~~~~~l~av~d~~-~~~~~~~a~~~-g----~~~~-~~~~~ll~~--~~~D~V~ 94 (350)
T 3rc1_A 26 NPIRVGVIGCADIAWRR--ALPALEAEPLTEVTAIASRR-WDRAKRFTERF-G----GEPV-EGYPALLER--DDVDAVY 94 (350)
T ss_dssp CCEEEEEESCCHHHHHT--HHHHHHHCTTEEEEEEEESS-HHHHHHHHHHH-C----SEEE-ESHHHHHTC--TTCSEEE
T ss_pred CceEEEEEcCcHHHHHH--HHHHHHhCCCeEEEEEEcCC-HHHHHHHHHHc-C----CCCc-CCHHHHhcC--CCCCEEE
Confidence 45678889987566421 2222221 1567775 5898 77665444433 2 2333 788887742 5789999
Q ss_pred EcCCCCCccHHHHHHHHHhh
Q 042616 118 IDCNIDIDGHKNVFRAAKES 137 (220)
Q Consensus 118 iD~~k~~~~y~~~l~~l~~~ 137 (220)
|-.+. ....++...+.+.
T Consensus 95 i~tp~--~~h~~~~~~al~a 112 (350)
T 3rc1_A 95 VPLPA--VLHAEWIDRALRA 112 (350)
T ss_dssp ECCCG--GGHHHHHHHHHHT
T ss_pred ECCCc--HHHHHHHHHHHHC
Confidence 97776 6666666666554
No 478
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=89.36 E-value=3.3 Score=35.38 Aligned_cols=87 Identities=11% Similarity=0.071 Sum_probs=50.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEE-EeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccEEE
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVC-ILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFVL 117 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~t-IE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~Vf 117 (220)
.+..+|.-||+|..|..-+..... ...+.++++ +|++ ++.++.+.+.+ + +.-+..|..+.+.. ..+|+|+
T Consensus 6 ~~~~~v~iiG~G~ig~~~~~~l~~-~~~~~~~vav~d~~-~~~~~~~a~~~-g----~~~~~~~~~~~l~~--~~~D~V~ 76 (346)
T 3cea_A 6 RKPLRAAIIGLGRLGERHARHLVN-KIQGVKLVAACALD-SNQLEWAKNEL-G----VETTYTNYKDMIDT--ENIDAIF 76 (346)
T ss_dssp CCCEEEEEECCSTTHHHHHHHHHH-TCSSEEEEEEECSC-HHHHHHHHHTT-C----CSEEESCHHHHHTT--SCCSEEE
T ss_pred CCcceEEEEcCCHHHHHHHHHHHh-cCCCcEEEEEecCC-HHHHHHHHHHh-C----CCcccCCHHHHhcC--CCCCEEE
Confidence 455688889998677543322220 112567665 6999 77765443332 2 11234677776632 4689999
Q ss_pred EcCCCCCccHHHHHHHHHh
Q 042616 118 IDCNIDIDGHKNVFRAAKE 136 (220)
Q Consensus 118 iD~~k~~~~y~~~l~~l~~ 136 (220)
+-.+. ....++...+.+
T Consensus 77 i~tp~--~~h~~~~~~al~ 93 (346)
T 3cea_A 77 IVAPT--PFHPEMTIYAMN 93 (346)
T ss_dssp ECSCG--GGHHHHHHHHHH
T ss_pred EeCCh--HhHHHHHHHHHH
Confidence 88776 555555555544
No 479
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=89.32 E-value=4.2 Score=35.65 Aligned_cols=78 Identities=12% Similarity=0.097 Sum_probs=50.0
Q ss_pred CCCEEEEEcCCchHHHHHH-HHHHcCCCCcEEEEEeCCch-------------------hHHHHHHHHhccc--CCcEEE
Q 042616 40 NAQLIVMACSSIAVSRTLA-LVAAARQTGGRVVCILSGVI-------------------GDIDASKKSLGRY--ANCIEF 97 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~-LA~A~~~~~grV~tIE~d~~-------------------~~~~~Ar~~l~g~--~~~Ve~ 97 (220)
+..+|+-+|+|+.|...+. |+.+ . -|+++-+|.| . .+++.+++.+..+ .-+|+.
T Consensus 117 ~~~~VlvvG~GglGs~va~~La~a-G--vg~i~lvD~D-~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~ 192 (353)
T 3h5n_A 117 KNAKVVILGCGGIGNHVSVILATS-G--IGEIILIDND-QIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSE 192 (353)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHH-T--CSEEEEEECC-BCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred hCCeEEEECCCHHHHHHHHHHHhC-C--CCeEEEECCC-cCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEE
Confidence 4578999999888876554 5544 2 4899999988 4 3566777777622 234666
Q ss_pred EEcchhhh--hhhcCCCccEEEEcCCC
Q 042616 98 VKGDAQKL--LMGDYRGADFVLIDCNI 122 (220)
Q Consensus 98 v~gda~~~--L~~~~~~~D~VfiD~~k 122 (220)
+..+..+. +.. ...+|+|+.-.+.
T Consensus 193 ~~~~i~~~~~~~~-~~~~DlVvd~~Dn 218 (353)
T 3h5n_A 193 IALNINDYTDLHK-VPEADIWVVSADH 218 (353)
T ss_dssp EECCCCSGGGGGG-SCCCSEEEECCCC
T ss_pred eecccCchhhhhH-hccCCEEEEecCC
Confidence 66544221 333 5689997754443
No 480
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=89.32 E-value=1.7 Score=35.74 Aligned_cols=39 Identities=13% Similarity=0.059 Sum_probs=28.1
Q ss_pred CCEEEEEcC-CchHHHHHH--HHHHcCCCCcEEEEEeCCchhH
Q 042616 41 AQLIVMACS-SIAVSRTLA--LVAAARQTGGRVVCILSGVIGD 80 (220)
Q Consensus 41 a~~ILEIGt-g~~G~sTl~--LA~A~~~~~grV~tIE~d~~~~ 80 (220)
++.|.-.++ |++|-+|+. ||.++...|.+|.-||.| ++.
T Consensus 18 ~~vI~v~s~kGGvGKTT~a~nLA~~la~~G~~VlliD~D-~~~ 59 (262)
T 2ph1_A 18 KSRIAVMSGKGGVGKSTVTALLAVHYARQGKKVGILDAD-FLG 59 (262)
T ss_dssp SCEEEEECSSSCTTHHHHHHHHHHHHHHTTCCEEEEECC-SSC
T ss_pred CeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCeEEEEeCC-CCC
Confidence 455555554 668988775 777766657799999999 775
No 481
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=89.27 E-value=0.67 Score=37.66 Aligned_cols=80 Identities=19% Similarity=0.199 Sum_probs=53.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCC-CCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhh--hhhc-------
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQ-TGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKL--LMGD------- 109 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~-~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~--L~~~------- 109 (220)
+.++||-.|+ +|.....+++.+.+ .+.+|+.++.+ ++..+...+.+.....+++++..|..+. +..+
T Consensus 3 ~~k~vlITGa--sggIG~~~a~~L~~~~g~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (276)
T 1wma_A 3 GIHVALVTGG--NKGIGLAIVRDLCRLFSGDVVLTARD-VTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKE 79 (276)
T ss_dssp CCCEEEESSC--SSHHHHHHHHHHHHHSSSEEEEEESS-HHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC--CcHHHHHHHHHHHHhcCCeEEEEeCC-hHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHh
Confidence 4578888774 46666666666655 58899999999 8777766666653235688888886532 1111
Q ss_pred CCCccEEEEcCCC
Q 042616 110 YRGADFVLIDCNI 122 (220)
Q Consensus 110 ~~~~D~VfiD~~k 122 (220)
.+++|.||.-+..
T Consensus 80 ~g~id~li~~Ag~ 92 (276)
T 1wma_A 80 YGGLDVLVNNAGI 92 (276)
T ss_dssp HSSEEEEEECCCC
T ss_pred cCCCCEEEECCcc
Confidence 2479999977653
No 482
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=89.26 E-value=2.1 Score=35.55 Aligned_cols=80 Identities=11% Similarity=0.162 Sum_probs=54.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhh--hhhc-------C
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKL--LMGD-------Y 110 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~--L~~~-------~ 110 (220)
..+.||-.|+ +|..+..++..+.+.+.+|+.++.+ ++..+...+.++....++.++.+|..+. +..+ .
T Consensus 43 ~~k~vlITGa--sggIG~~la~~L~~~G~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 119 (285)
T 2c07_A 43 ENKVALVTGA--GRGIGREIAKMLAKSVSHVICISRT-QKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH 119 (285)
T ss_dssp SSCEEEEEST--TSHHHHHHHHHHTTTSSEEEEEESS-HHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECC--CcHHHHHHHHHHHHcCCEEEEEcCC-HHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhc
Confidence 3478898884 4666777777777668899999988 7777666555553335688888886432 1111 3
Q ss_pred CCccEEEEcCCC
Q 042616 111 RGADFVLIDCNI 122 (220)
Q Consensus 111 ~~~D~VfiD~~k 122 (220)
+++|.||..+..
T Consensus 120 ~~id~li~~Ag~ 131 (285)
T 2c07_A 120 KNVDILVNNAGI 131 (285)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 579999987654
No 483
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=89.26 E-value=1.4 Score=35.67 Aligned_cols=80 Identities=10% Similarity=0.109 Sum_probs=54.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhh------hhh---cC
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKL------LMG---DY 110 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~------L~~---~~ 110 (220)
+.+.+|-.|+ +|.....+++.+.+.+.+|+.++.+ ++..+...+.++....+++++..|..+. +.. ..
T Consensus 4 ~~k~vlITGa--s~gIG~~~a~~l~~~G~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (247)
T 3lyl_A 4 NEKVALVTGA--SRGIGFEVAHALASKGATVVGTATS-QASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAEN 80 (247)
T ss_dssp TTCEEEESSC--SSHHHHHHHHHHHHTTCEEEEEESS-HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECC--CChHHHHHHHHHHHCCCEEEEEeCC-HHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 4578888884 3444555555555558899999999 8877777666653335789999886432 111 13
Q ss_pred CCccEEEEcCCC
Q 042616 111 RGADFVLIDCNI 122 (220)
Q Consensus 111 ~~~D~VfiD~~k 122 (220)
+++|.++..+..
T Consensus 81 ~~id~li~~Ag~ 92 (247)
T 3lyl_A 81 LAIDILVNNAGI 92 (247)
T ss_dssp CCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 579999987754
No 484
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=89.23 E-value=2.9 Score=30.01 Aligned_cols=68 Identities=16% Similarity=0.112 Sum_probs=46.7
Q ss_pred CcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc-CCCccEEEEcCCCCCccHHHHHHHHHhh
Q 042616 67 GGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD-YRGADFVLIDCNIDIDGHKNVFRAAKES 137 (220)
Q Consensus 67 ~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~-~~~~D~VfiD~~k~~~~y~~~l~~l~~~ 137 (220)
.-+|.-||.+ +...+..+..++...-.+. ...+..+.+..+ ...+|+|++|. ....+..+.++.+...
T Consensus 4 ~~~iLivdd~-~~~~~~l~~~L~~~g~~v~-~~~~~~~a~~~l~~~~~dlvi~d~-~~~~~g~~~~~~l~~~ 72 (142)
T 2qxy_A 4 TPTVMVVDES-RITFLAVKNALEKDGFNVI-WAKNEQEAFTFLRREKIDLVFVDV-FEGEESLNLIRRIREE 72 (142)
T ss_dssp CCEEEEECSC-HHHHHHHHHHHGGGTCEEE-EESSHHHHHHHHTTSCCSEEEEEC-TTTHHHHHHHHHHHHH
T ss_pred CCeEEEEeCC-HHHHHHHHHHHHhCCCEEE-EECCHHHHHHHHhccCCCEEEEeC-CCCCcHHHHHHHHHHH
Confidence 4589999999 8888888888873222444 556666666443 35799999998 6223445667777765
No 485
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=89.21 E-value=1.3 Score=36.88 Aligned_cols=80 Identities=10% Similarity=0.059 Sum_probs=53.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhh------hhhc---C
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKL------LMGD---Y 110 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~------L~~~---~ 110 (220)
..+.+|-.|+ +|-....+|+.+.+.|.+|+.++.+ ++.++.+.+.+.....++.++..|..+. +... .
T Consensus 23 ~~k~~lVTGa--s~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (279)
T 3sju_A 23 RPQTAFVTGV--SSGIGLAVARTLAARGIAVYGCARD-AKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERF 99 (279)
T ss_dssp --CEEEEEST--TSHHHHHHHHHHHHTTCEEEEEESC-HHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC--CCHHHHHHHHHHHHCCCEEEEEeCC-HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 5688998885 3334445555554458899999999 8887777766653345789999886432 1111 3
Q ss_pred CCccEEEEcCCC
Q 042616 111 RGADFVLIDCNI 122 (220)
Q Consensus 111 ~~~D~VfiD~~k 122 (220)
+++|.++..+..
T Consensus 100 g~id~lv~nAg~ 111 (279)
T 3sju_A 100 GPIGILVNSAGR 111 (279)
T ss_dssp CSCCEEEECCCC
T ss_pred CCCcEEEECCCC
Confidence 589999987754
No 486
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=89.17 E-value=1.7 Score=39.55 Aligned_cols=106 Identities=22% Similarity=0.214 Sum_probs=64.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhc-----cc---------CCcEEEEEcchhh
Q 042616 39 NNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLG-----RY---------ANCIEFVKGDAQK 104 (220)
Q Consensus 39 ~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~-----g~---------~~~Ve~v~gda~~ 104 (220)
+..-+|--||+|..| +.||..+.+.|-+|+++|.| ++.++..++... ++ ..++++ ..|..+
T Consensus 6 ~~~~~~~vIGlG~vG---~~~A~~La~~G~~V~~~D~~-~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~-ttd~~e 80 (446)
T 4a7p_A 6 HGSVRIAMIGTGYVG---LVSGACFSDFGHEVVCVDKD-ARKIELLHQNVMPIYEPGLDALVASNVKAGRLSF-TTDLAE 80 (446)
T ss_dssp -CCCEEEEECCSHHH---HHHHHHHHHTTCEEEEECSC-STTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHH
T ss_pred CCceEEEEEcCCHHH---HHHHHHHHHCCCEEEEEeCC-HHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEE-ECCHHH
Confidence 456678888865444 44444444436689999999 888876655311 11 123443 355555
Q ss_pred hhhhcCCCccEEEEcCCCCCc---------cHHHHHHHHHhhcCCCCCCEEEEEecCCCCC
Q 042616 105 LLMGDYRGADFVLIDCNIDID---------GHKNVFRAAKESVMHGSGAGVIVGYNALPKG 156 (220)
Q Consensus 105 ~L~~~~~~~D~VfiD~~k~~~---------~y~~~l~~l~~~~~L~~~Ggviv~dNv~~~g 156 (220)
.+ ...|+||+--+.+.. .....++.+.+. ++ +|.+||......+|
T Consensus 81 a~----~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~--l~-~g~iVV~~STv~pg 134 (446)
T 4a7p_A 81 GV----KDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAEN--LT-KPSVIVTKSTVPVG 134 (446)
T ss_dssp HH----TTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHS--CC-SCCEEEECSCCCTT
T ss_pred HH----hcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHh--cC-CCCEEEEeCCCCch
Confidence 54 357999987433111 146667788887 75 48888877666666
No 487
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=89.15 E-value=1.4 Score=36.17 Aligned_cols=80 Identities=8% Similarity=0.020 Sum_probs=52.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhh--hhhc-------C
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKL--LMGD-------Y 110 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~--L~~~-------~ 110 (220)
+.+.+|-.|. +|.....++..+.+.+.+|+.++.+ ++.++...+.+.....++.++..|..+. +..+ .
T Consensus 8 ~~k~vlVTGa--s~giG~~ia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (260)
T 2ae2_A 8 EGCTALVTGG--SRGIGYGIVEELASLGASVYTCSRN-QKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF 84 (260)
T ss_dssp TTCEEEEESC--SSHHHHHHHHHHHHTTCEEEEEESC-HHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECC--CcHHHHHHHHHHHHCCCEEEEEeCC-HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4578998884 3444555555555457899999999 7777665555543235688888886432 1111 2
Q ss_pred -CCccEEEEcCCC
Q 042616 111 -RGADFVLIDCNI 122 (220)
Q Consensus 111 -~~~D~VfiD~~k 122 (220)
+.+|.++-.+..
T Consensus 85 ~g~id~lv~~Ag~ 97 (260)
T 2ae2_A 85 HGKLNILVNNAGI 97 (260)
T ss_dssp TTCCCEEEECCCC
T ss_pred CCCCCEEEECCCC
Confidence 679999987753
No 488
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=89.13 E-value=1.4 Score=36.31 Aligned_cols=81 Identities=12% Similarity=0.101 Sum_probs=53.9
Q ss_pred hCCCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhh------hhhc--
Q 042616 38 GNNAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKL------LMGD-- 109 (220)
Q Consensus 38 ~~~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~------L~~~-- 109 (220)
..+.+.+|-.|+ ++.....+|..+.+.+.+|+.++.+ ++.++...+.+.....++.++..|..+. +...
T Consensus 8 ~l~~k~vlVTGa--s~gIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (264)
T 3ucx_A 8 LLTDKVVVISGV--GPALGTTLARRCAEQGADLVLAART-VERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMK 84 (264)
T ss_dssp TTTTCEEEEESC--CTTHHHHHHHHHHHTTCEEEEEESC-HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CcCCcEEEEECC--CcHHHHHHHHHHHHCcCEEEEEeCC-HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 346688998885 2333444444444448899999999 8888777776653346789998886432 1111
Q ss_pred -CCCccEEEEcCC
Q 042616 110 -YRGADFVLIDCN 121 (220)
Q Consensus 110 -~~~~D~VfiD~~ 121 (220)
.+++|.++..+.
T Consensus 85 ~~g~id~lv~nAg 97 (264)
T 3ucx_A 85 AYGRVDVVINNAF 97 (264)
T ss_dssp HTSCCSEEEECCC
T ss_pred HcCCCcEEEECCC
Confidence 468999998773
No 489
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=89.12 E-value=2.6 Score=29.07 Aligned_cols=67 Identities=13% Similarity=0.091 Sum_probs=45.3
Q ss_pred EEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc-CCCccEEEEcCCCCCccHHHHHHHHHhh
Q 042616 69 RVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD-YRGADFVLIDCNIDIDGHKNVFRAAKES 137 (220)
Q Consensus 69 rV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~-~~~~D~VfiD~~k~~~~y~~~l~~l~~~ 137 (220)
+|.-+|.+ +...+..+..++...-.+. ...++.+.+..+ ...+|+|++|......+-.+.++.+...
T Consensus 3 ~ilivdd~-~~~~~~l~~~l~~~~~~v~-~~~~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~ 70 (116)
T 3a10_A 3 RILVVDDE-PNIRELLKEELQEEGYEID-TAENGEEALKKFFSGNYDLVILDIEMPGISGLEVAGEIRKK 70 (116)
T ss_dssp EEEEECSC-HHHHHHHHHHHHHTTCEEE-EESSHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHH
T ss_pred EEEEEeCC-HHHHHHHHHHHHHCCCEEE-EeCCHHHHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHcc
Confidence 67888999 8888888888863222344 455666655433 2578999999876334556777777765
No 490
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=89.09 E-value=4 Score=33.26 Aligned_cols=80 Identities=10% Similarity=0.028 Sum_probs=49.5
Q ss_pred CCCEEEEEcCCchHH--HHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccC-CcEEEEEcchhhh------hhhc-
Q 042616 40 NAQLIVMACSSIAVS--RTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYA-NCIEFVKGDAQKL------LMGD- 109 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~--sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~-~~Ve~v~gda~~~------L~~~- 109 (220)
+.+.+|-.|++ |. ....+|+.+.+.+.+|+.++.+ +...+.+.+..+... .++.++..|..+. +...
T Consensus 6 ~~k~vlVTGas--g~~GIG~~ia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 82 (266)
T 3oig_A 6 EGRNIVVMGVA--NKRSIAWGIARSLHEAGARLIFTYAG-ERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIK 82 (266)
T ss_dssp TTCEEEEECCC--STTSHHHHHHHHHHHTTCEEEEEESS-GGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHH
T ss_pred CCCEEEEEcCC--CCCcHHHHHHHHHHHCCCEEEEecCc-hHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHH
Confidence 46789988842 22 2334444444448899999998 766666666554322 3688888886431 1111
Q ss_pred --CCCccEEEEcCCC
Q 042616 110 --YRGADFVLIDCNI 122 (220)
Q Consensus 110 --~~~~D~VfiD~~k 122 (220)
.+.+|.++..+..
T Consensus 83 ~~~g~id~li~~Ag~ 97 (266)
T 3oig_A 83 EQVGVIHGIAHCIAF 97 (266)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHhCCeeEEEEcccc
Confidence 2579999987653
No 491
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=89.08 E-value=2.8 Score=30.15 Aligned_cols=68 Identities=15% Similarity=0.068 Sum_probs=47.5
Q ss_pred cEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc---CCCccEEEEcCCCCCccHHHHHHHHHhh
Q 042616 68 GRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD---YRGADFVLIDCNIDIDGHKNVFRAAKES 137 (220)
Q Consensus 68 grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~---~~~~D~VfiD~~k~~~~y~~~l~~l~~~ 137 (220)
-+|.-||.+ +...+..+..++.....+. ...+..+.+..+ ...+|+||+|......+-.+.++.+...
T Consensus 4 ~~ilivdd~-~~~~~~l~~~l~~~g~~v~-~~~~~~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~ 74 (143)
T 3jte_A 4 AKILVIDDE-STILQNIKFLLEIDGNEVL-TASSSTEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKI 74 (143)
T ss_dssp CEEEEECSC-HHHHHHHHHHHHHTTCEEE-EESSHHHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHH
T ss_pred CEEEEEcCC-HHHHHHHHHHHHhCCceEE-EeCCHHHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHh
Confidence 478999999 8888888888873222333 455666555333 3579999999877435567788888876
No 492
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=89.06 E-value=2 Score=31.43 Aligned_cols=70 Identities=16% Similarity=-0.052 Sum_probs=49.4
Q ss_pred CcEEEEEeCCchhHHHHHHHHhcccCCc-EEEEEcchhhhhhhc-CCCccEEEEcCCCCCccHHHHHHHHHhh
Q 042616 67 GGRVVCILSGVIGDIDASKKSLGRYANC-IEFVKGDAQKLLMGD-YRGADFVLIDCNIDIDGHKNVFRAAKES 137 (220)
Q Consensus 67 ~grV~tIE~d~~~~~~~Ar~~l~g~~~~-Ve~v~gda~~~L~~~-~~~~D~VfiD~~k~~~~y~~~l~~l~~~ 137 (220)
..+|.-||.+ +...+..+..++..... +-....+..+.+..+ ..++|+|++|......+..+.++.+...
T Consensus 15 ~~~iLivdd~-~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~ 86 (152)
T 3eul_A 15 KVRVVVGDDH-PLFREGVVRALSLSGSVNVVGEADDGAAALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSY 86 (152)
T ss_dssp CEEEEEECSS-HHHHHHHHHHHHHHSSEEEEEEESSHHHHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHT
T ss_pred eEEEEEEcCC-HHHHHHHHHHHhhCCCeEEEEEeCCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhc
Confidence 5789999999 88888888888732222 223466766665433 2579999999876445667888888875
No 493
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=89.00 E-value=2.9 Score=29.53 Aligned_cols=69 Identities=12% Similarity=0.080 Sum_probs=48.1
Q ss_pred CcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc-CCCccEEEEcCCCCCccHHHHHHHHHhh
Q 042616 67 GGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD-YRGADFVLIDCNIDIDGHKNVFRAAKES 137 (220)
Q Consensus 67 ~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~-~~~~D~VfiD~~k~~~~y~~~l~~l~~~ 137 (220)
.-+|.-||.+ +...+..+..++...-.+. ...++.+.+..+ ..++|+|++|......+-.+.++.+...
T Consensus 6 ~~~ilivdd~-~~~~~~l~~~L~~~g~~v~-~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~ 75 (132)
T 3lte_A 6 SKRILVVDDD-QAMAAAIERVLKRDHWQVE-IAHNGFDAGIKLSTFEPAIMTLDLSMPKLDGLDVIRSLRQN 75 (132)
T ss_dssp -CEEEEECSC-HHHHHHHHHHHHHTTCEEE-EESSHHHHHHHHHHTCCSEEEEESCBTTBCHHHHHHHHHTT
T ss_pred CccEEEEECC-HHHHHHHHHHHHHCCcEEE-EeCCHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhc
Confidence 4689999999 8888888888873212343 556666665433 3679999999876335567788888765
No 494
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=88.88 E-value=2.6 Score=38.80 Aligned_cols=106 Identities=10% Similarity=-0.004 Sum_probs=62.5
Q ss_pred hCCCCEEEEEcCCchHHHHHHHHHHcCCC-Cc-EEEEEeCCchh----HHHHHHHHh------c-cc---------CCcE
Q 042616 38 GNNAQLIVMACSSIAVSRTLALVAAARQT-GG-RVVCILSGVIG----DIDASKKSL------G-RY---------ANCI 95 (220)
Q Consensus 38 ~~~a~~ILEIGtg~~G~sTl~LA~A~~~~-~g-rV~tIE~d~~~----~~~~Ar~~l------~-g~---------~~~V 95 (220)
..+-.+|--||+|..|..... .+... |- .|+++|.+ ++ .++..++.. + ++ ..++
T Consensus 15 ~~~~mkIaVIGlG~mG~~lA~---~la~~~G~~~V~~~D~~-~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l 90 (478)
T 3g79_A 15 RGPIKKIGVLGMGYVGIPAAV---LFADAPCFEKVLGFQRN-SKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKF 90 (478)
T ss_dssp HCSCCEEEEECCSTTHHHHHH---HHHHSTTCCEEEEECCC-CTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCE
T ss_pred cCCCCEEEEECcCHHHHHHHH---HHHHhCCCCeEEEEECC-hhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCe
Confidence 455678988998766654333 22222 44 79999999 88 666554411 1 11 2344
Q ss_pred EEEEcchhhhhhhcCCCccEEEEcCCCCC-------cc---HHHHHHHHHhhcCCCCCCEEEEEecCCCCC
Q 042616 96 EFVKGDAQKLLMGDYRGADFVLIDCNIDI-------DG---HKNVFRAAKESVMHGSGAGVIVGYNALPKG 156 (220)
Q Consensus 96 e~v~gda~~~L~~~~~~~D~VfiD~~k~~-------~~---y~~~l~~l~~~~~L~~~Ggviv~dNv~~~g 156 (220)
.+ ..| .+.+ ...|+||+--+.+. .+ .....+.+.+. +++ |.+||......+|
T Consensus 91 ~~-ttd-~ea~----~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~--l~~-g~iVV~~STv~pg 152 (478)
T 3g79_A 91 EC-TPD-FSRI----SELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKY--LKP-GMLVVLESTITPG 152 (478)
T ss_dssp EE-ESC-GGGG----GGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHH--CCT-TCEEEECSCCCTT
T ss_pred EE-eCc-HHHH----hcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhh--cCC-CcEEEEeCCCChH
Confidence 44 233 3333 35799998765411 11 24456777787 754 8888876666665
No 495
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=88.86 E-value=3.7 Score=29.97 Aligned_cols=69 Identities=12% Similarity=0.039 Sum_probs=48.3
Q ss_pred cEEEEEeCCchhHHHHHHHHhcccCCcE-EEEEcchhhhhhhc-CCCccEEEEcCCCCCccHHHHHHHHHhh
Q 042616 68 GRVVCILSGVIGDIDASKKSLGRYANCI-EFVKGDAQKLLMGD-YRGADFVLIDCNIDIDGHKNVFRAAKES 137 (220)
Q Consensus 68 grV~tIE~d~~~~~~~Ar~~l~g~~~~V-e~v~gda~~~L~~~-~~~~D~VfiD~~k~~~~y~~~l~~l~~~ 137 (220)
-+|.-||.+ +...+..+..++...... -....+..+.+..+ ...+|+|++|......+-.+.++.+...
T Consensus 21 ~~iLivdd~-~~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~ 91 (150)
T 4e7p_A 21 MKVLVAEDQ-SMLRDAMCQLLTLQPDVESVLQAKNGQEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSE 91 (150)
T ss_dssp EEEEEECSC-HHHHHHHHHHHHTSTTEEEEEEESSHHHHHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHT
T ss_pred cEEEEEcCC-HHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHh
Confidence 478999999 888888888886332223 33456666666444 3679999999876435667788888875
No 496
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=88.84 E-value=1.4 Score=36.52 Aligned_cols=87 Identities=9% Similarity=0.090 Sum_probs=54.9
Q ss_pred EEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhcCCCccEEEEcCCC
Q 042616 43 LIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGDYRGADFVLIDCNI 122 (220)
Q Consensus 43 ~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~~~~~D~VfiD~~k 122 (220)
+|.-||+|..|. .++..+...+-+|+.++++ ++.++.+++. +... . ...+..+ . ...|+||+-.+.
T Consensus 2 ~i~iiG~G~~G~---~~a~~l~~~g~~V~~~~~~-~~~~~~~~~~--g~~~--~-~~~~~~~----~-~~~D~vi~av~~ 67 (279)
T 2f1k_A 2 KIGVVGLGLIGA---SLAGDLRRRGHYLIGVSRQ-QSTCEKAVER--QLVD--E-AGQDLSL----L-QTAKIIFLCTPI 67 (279)
T ss_dssp EEEEECCSHHHH---HHHHHHHHTTCEEEEECSC-HHHHHHHHHT--TSCS--E-EESCGGG----G-TTCSEEEECSCH
T ss_pred EEEEEcCcHHHH---HHHHHHHHCCCEEEEEECC-HHHHHHHHhC--CCCc--c-ccCCHHH----h-CCCCEEEEECCH
Confidence 577789765554 3333333324589999999 8877665431 3311 1 2233333 2 468999998887
Q ss_pred CCccHHHHHHHHHhhcCCCCCCEEEE
Q 042616 123 DIDGHKNVFRAAKESVMHGSGAGVIV 148 (220)
Q Consensus 123 ~~~~y~~~l~~l~~~~~L~~~Ggviv 148 (220)
....++++.+.+. +.+ |.+|+
T Consensus 68 --~~~~~~~~~l~~~--~~~-~~~vv 88 (279)
T 2f1k_A 68 --QLILPTLEKLIPH--LSP-TAIVT 88 (279)
T ss_dssp --HHHHHHHHHHGGG--SCT-TCEEE
T ss_pred --HHHHHHHHHHHhh--CCC-CCEEE
Confidence 6678888888887 654 77665
No 497
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=88.83 E-value=8 Score=32.77 Aligned_cols=73 Identities=16% Similarity=0.066 Sum_probs=44.0
Q ss_pred CEEEEEcCCchHHHHHH-HHHHcCCCCcEEEEEeCCchhHHHHHHHHhc-c---cCCcEEEEEcchhhhhhhcCCCccEE
Q 042616 42 QLIVMACSSIAVSRTLA-LVAAARQTGGRVVCILSGVIGDIDASKKSLG-R---YANCIEFVKGDAQKLLMGDYRGADFV 116 (220)
Q Consensus 42 ~~ILEIGtg~~G~sTl~-LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~-g---~~~~Ve~v~gda~~~L~~~~~~~D~V 116 (220)
.+|.-||+|..|..-.. |+.+ .. ...|+.+|.+ ++.++.....+. . ....+.+...|. +.+ ...|+|
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~-g~-~~~V~l~d~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~----~~aDvV 73 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQ-GV-ADDYVFIDAN-EAKVKADQIDFQDAMANLEAHGNIVINDW-AAL----ADADVV 73 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TC-CSEEEEECSS-HHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGG----TTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CC-CCEEEEEcCC-HHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHh----CCCCEE
Confidence 36888998877765332 2222 10 1589999999 877765443332 1 112355544564 433 468999
Q ss_pred EEcCCC
Q 042616 117 LIDCNI 122 (220)
Q Consensus 117 fiD~~k 122 (220)
|+-...
T Consensus 74 iiav~~ 79 (309)
T 1hyh_A 74 ISTLGN 79 (309)
T ss_dssp EECCSC
T ss_pred EEecCC
Confidence 998876
No 498
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=88.81 E-value=2.2 Score=35.37 Aligned_cols=80 Identities=13% Similarity=0.160 Sum_probs=52.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhh------hhh---cC
Q 042616 40 NAQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKL------LMG---DY 110 (220)
Q Consensus 40 ~a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~------L~~---~~ 110 (220)
+.+.+|-.|+ +|.....++..+.+.+.+|+.++.+ ++.++...+.++....++.++..|..+. +.. ..
T Consensus 21 ~~k~vlVTGa--s~gIG~~ia~~l~~~G~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 97 (277)
T 2rhc_B 21 DSEVALVTGA--TSGIGLEIARRLGKEGLRVFVCARG-EEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY 97 (277)
T ss_dssp TSCEEEEETC--SSHHHHHHHHHHHHTTCEEEEEESC-HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECC--CCHHHHHHHHHHHHCCCEEEEEeCC-HHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHh
Confidence 5678998885 3445555555555557899999999 7777666555543235688888886431 111 13
Q ss_pred CCccEEEEcCCC
Q 042616 111 RGADFVLIDCNI 122 (220)
Q Consensus 111 ~~~D~VfiD~~k 122 (220)
+++|.+|..+..
T Consensus 98 g~iD~lv~~Ag~ 109 (277)
T 2rhc_B 98 GPVDVLVNNAGR 109 (277)
T ss_dssp CSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 579999987653
No 499
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=88.79 E-value=0.91 Score=36.00 Aligned_cols=72 Identities=21% Similarity=0.156 Sum_probs=52.0
Q ss_pred CCEEEEEcCCchHHHHHHHHHHcCCCCcEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhh--hhhhcCCCccEEEE
Q 042616 41 AQLIVMACSSIAVSRTLALVAAARQTGGRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQK--LLMGDYRGADFVLI 118 (220)
Q Consensus 41 a~~ILEIGtg~~G~sTl~LA~A~~~~~grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~--~L~~~~~~~D~Vfi 118 (220)
.++||-+|+ +|+...++++.+.+.+-+|++++.+ +... ..+..+++++.+|..+ .+......+|.||.
T Consensus 4 m~~ilItGa--tG~iG~~l~~~L~~~g~~V~~~~r~-~~~~-------~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 73 (227)
T 3dhn_A 4 VKKIVLIGA--SGFVGSALLNEALNRGFEVTAVVRH-PEKI-------KIENEHLKVKKADVSSLDEVCEVCKGADAVIS 73 (227)
T ss_dssp CCEEEEETC--CHHHHHHHHHHHHTTTCEEEEECSC-GGGC-------CCCCTTEEEECCCTTCHHHHHHHHTTCSEEEE
T ss_pred CCEEEEEcC--CchHHHHHHHHHHHCCCEEEEEEcC-cccc-------hhccCceEEEEecCCCHHHHHHHhcCCCEEEE
Confidence 468999883 6888888888887767899999999 6543 2223679999998754 23333457899997
Q ss_pred cCCC
Q 042616 119 DCNI 122 (220)
Q Consensus 119 D~~k 122 (220)
-+..
T Consensus 74 ~a~~ 77 (227)
T 3dhn_A 74 AFNP 77 (227)
T ss_dssp CCCC
T ss_pred eCcC
Confidence 6654
No 500
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=88.78 E-value=2.8 Score=29.95 Aligned_cols=68 Identities=13% Similarity=0.086 Sum_probs=47.2
Q ss_pred cEEEEEeCCchhHHHHHHHHhcccCCcEEEEEcchhhhhhhc-CCCccEEEEcCCCCCccHHHHHHHHHhh
Q 042616 68 GRVVCILSGVIGDIDASKKSLGRYANCIEFVKGDAQKLLMGD-YRGADFVLIDCNIDIDGHKNVFRAAKES 137 (220)
Q Consensus 68 grV~tIE~d~~~~~~~Ar~~l~g~~~~Ve~v~gda~~~L~~~-~~~~D~VfiD~~k~~~~y~~~l~~l~~~ 137 (220)
.+|.-||-+ +...+..+..++...-.+. ...++.+.+..+ ...+|+|++|......+-.+.++.+.+.
T Consensus 4 ~~Ilivdd~-~~~~~~l~~~L~~~g~~v~-~~~~~~~al~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~ 72 (132)
T 3crn_A 4 KRILIVDDD-TAILDSTKQILEFEGYEVE-IAATAGEGLAKIENEFFNLALFXIKLPDMEGTELLEKAHKL 72 (132)
T ss_dssp CEEEEECSC-HHHHHHHHHHHHHTTCEEE-EESSHHHHHHHHHHSCCSEEEECSBCSSSBHHHHHHHHHHH
T ss_pred cEEEEEeCC-HHHHHHHHHHHHHCCceEE-EeCCHHHHHHHHhcCCCCEEEEecCCCCCchHHHHHHHHhh
Confidence 478899999 8888888888863222354 566666665433 2578999999876334556778887765
Done!