Query 042619
Match_columns 402
No_of_seqs 162 out of 1663
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 07:57:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042619.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042619hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02441 cytokinin dehydrogena 100.0 4.8E-28 1E-32 245.1 32.4 141 1-144 116-265 (525)
2 PRK11282 glcE glycolate oxidas 99.9 1.9E-24 4.2E-29 210.0 15.1 131 1-132 43-181 (352)
3 TIGR01678 FAD_lactone_ox sugar 99.9 4E-23 8.7E-28 207.5 25.1 139 1-148 63-204 (438)
4 COG0277 GlcD FAD/FMN-containin 99.9 5.1E-23 1.1E-27 209.7 24.0 133 1-134 81-220 (459)
5 PLN02805 D-lactate dehydrogena 99.9 2.8E-23 6.1E-28 213.3 16.6 141 1-144 184-331 (555)
6 PRK11230 glycolate oxidase sub 99.9 2.6E-22 5.5E-27 205.0 16.0 143 1-144 106-254 (499)
7 TIGR01676 GLDHase galactonolac 99.9 2.5E-22 5.5E-27 203.4 15.5 140 1-148 110-251 (541)
8 TIGR01679 bact_FAD_ox FAD-link 99.9 6.7E-22 1.5E-26 198.3 15.0 122 1-125 57-180 (419)
9 TIGR00387 glcD glycolate oxida 99.9 1.8E-21 3.8E-26 195.4 14.7 143 1-144 48-197 (413)
10 TIGR01677 pln_FAD_oxido plant- 99.9 4.1E-21 8.8E-26 197.1 15.2 121 1-124 85-215 (557)
11 KOG1231 Proteins containing th 99.8 9.8E-21 2.1E-25 181.9 13.6 118 3-122 121-240 (505)
12 PLN02465 L-galactono-1,4-lacto 99.8 1.3E-18 2.8E-23 177.8 16.4 120 1-124 145-267 (573)
13 KOG1232 Proteins containing th 99.7 4.5E-15 9.9E-20 139.9 18.6 128 1-129 140-274 (511)
14 PF08031 BBE: Berberine and be 99.6 4.2E-17 9E-22 111.6 1.9 47 341-398 1-47 (47)
15 PF01565 FAD_binding_4: FAD bi 99.6 1.3E-15 2.8E-20 130.0 7.7 87 1-87 50-137 (139)
16 KOG1262 FAD-binding protein DI 99.6 5E-15 1.1E-19 140.1 8.1 116 8-125 116-233 (543)
17 KOG4730 D-arabinono-1, 4-lacto 99.5 4.1E-14 8.9E-19 136.7 10.8 128 1-130 98-227 (518)
18 PRK11183 D-lactate dehydrogena 99.5 1.1E-13 2.4E-18 139.0 10.9 142 1-146 94-291 (564)
19 PRK13905 murB UDP-N-acetylenol 99.4 2.9E-13 6.3E-18 130.0 6.2 110 2-121 81-193 (298)
20 KOG1233 Alkyl-dihydroxyacetone 99.2 3.5E-11 7.6E-16 114.1 8.1 129 1-134 215-353 (613)
21 PRK14652 UDP-N-acetylenolpyruv 99.0 1.1E-09 2.5E-14 105.0 7.0 102 11-121 94-196 (302)
22 PRK13903 murB UDP-N-acetylenol 98.9 4.8E-09 1E-13 102.7 8.6 110 4-121 84-197 (363)
23 TIGR00179 murB UDP-N-acetyleno 98.9 2.9E-09 6.2E-14 101.5 6.8 110 1-119 62-174 (284)
24 PRK13906 murB UDP-N-acetylenol 98.9 2.8E-09 6.1E-14 102.5 5.9 110 1-120 86-197 (307)
25 PRK12436 UDP-N-acetylenolpyruv 98.8 5.4E-09 1.2E-13 100.5 6.9 109 1-120 86-197 (305)
26 PRK14649 UDP-N-acetylenolpyruv 98.6 1.2E-07 2.5E-12 90.9 6.7 109 6-121 76-193 (295)
27 PRK14653 UDP-N-acetylenolpyruv 98.3 1.7E-06 3.7E-11 82.8 7.1 107 2-121 83-194 (297)
28 PRK14650 UDP-N-acetylenolpyruv 97.9 3.1E-05 6.7E-10 74.1 6.7 110 3-122 85-196 (302)
29 COG0812 MurB UDP-N-acetylmuram 97.7 0.00011 2.4E-09 69.4 8.0 110 3-120 72-183 (291)
30 PRK00046 murB UDP-N-acetylenol 97.6 7.7E-05 1.7E-09 72.4 5.4 109 4-120 71-188 (334)
31 PRK14651 UDP-N-acetylenolpyruv 97.3 0.00047 1E-08 65.1 5.7 92 17-120 75-170 (273)
32 PRK14648 UDP-N-acetylenolpyruv 97.2 0.00064 1.4E-08 66.2 6.7 111 3-121 81-237 (354)
33 PRK13904 murB UDP-N-acetylenol 97.2 0.00081 1.8E-08 62.9 6.3 104 2-122 57-161 (257)
34 PF09265 Cytokin-bind: Cytokin 95.4 0.0045 9.8E-08 58.5 0.1 34 363-397 247-280 (281)
35 PLN00107 FAD-dependent oxidore 90.6 0.77 1.7E-05 42.7 6.6 27 366-394 171-197 (257)
36 PF02913 FAD-oxidase_C: FAD li 86.5 0.85 1.8E-05 41.8 4.1 27 366-392 217-244 (248)
37 PF04030 ALO: D-arabinono-1,4- 82.4 1.1 2.4E-05 42.0 2.9 26 366-393 228-253 (259)
38 TIGR01677 pln_FAD_oxido plant- 76.9 3.5 7.6E-05 43.3 4.8 27 366-394 477-503 (557)
39 TIGR00387 glcD glycolate oxida 72.1 3.2 6.9E-05 41.9 3.0 28 365-392 382-410 (413)
40 PLN02805 D-lactate dehydrogena 66.0 8.8 0.00019 40.3 4.8 34 365-398 516-550 (555)
41 PRK11230 glycolate oxidase sub 64.9 7.5 0.00016 40.3 4.0 31 365-395 439-470 (499)
42 TIGR01679 bact_FAD_ox FAD-link 64.2 3.2 6.9E-05 42.0 1.1 22 374-395 392-413 (419)
43 KOG4730 D-arabinono-1, 4-lacto 52.1 7.5 0.00016 39.1 1.4 20 373-392 485-504 (518)
44 PRK11282 glcE glycolate oxidas 50.6 9.4 0.0002 37.7 1.8 21 372-392 323-344 (352)
45 KOG4656 Copper chaperone for s 32.1 68 0.0015 29.0 4.0 41 3-44 33-73 (247)
46 TIGR01676 GLDHase galactonolac 27.2 35 0.00075 35.7 1.6 26 366-394 509-534 (541)
47 PLN02465 L-galactono-1,4-lacto 26.3 37 0.00079 35.8 1.6 28 364-394 537-564 (573)
48 PF02762 Cbl_N3: CBL proto-onc 26.0 86 0.0019 23.6 3.0 28 75-102 41-68 (86)
49 COG1570 XseA Exonuclease VII, 25.0 49 0.0011 33.5 2.1 30 372-401 104-135 (440)
50 PF03392 OS-D: Insect pheromon 21.8 52 0.0011 25.9 1.3 14 379-392 79-92 (95)
51 PF12108 SF3a60_bindingd: Spli 20.6 46 0.001 19.9 0.6 12 373-384 11-22 (28)
No 1
>PLN02441 cytokinin dehydrogenase
Probab=99.97 E-value=4.8e-28 Score=245.12 Aligned_cols=141 Identities=21% Similarity=0.279 Sum_probs=120.1
Q ss_pred CCCCCc------e-EEeCCCCEEEEcCCCCHHHHHHHHHhcCCceee-ccCCCCcccchhhhcCCCCCCccccccccccc
Q 042619 1 LAKLRS------I-EVDINNKTAWVQAGATIGELYYRISEKSNIHGF-AAGLCPSVGIGGHITGGGYGTMMRKYGLAADN 72 (402)
Q Consensus 1 l~~~~~------i-~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~-~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~ 72 (402)
|++||+ + ++|.+..+|+|++|++|.||.+++.++|. ++ ..+.+..++|||.+.++|+|..+.+||..+||
T Consensus 116 ms~Ln~i~~~~~ii~vd~~~~~VtV~aG~~~~dv~~~l~~~Gl--aP~~~~d~~~~TVGG~ist~G~gg~s~ryG~~~d~ 193 (525)
T PLN02441 116 MRSLRGGVRGPPVIVVSGDGPYVDVSGGELWIDVLKATLKHGL--APRSWTDYLYLTVGGTLSNAGISGQAFRHGPQISN 193 (525)
T ss_pred CCCCCCcCccCceEEEcCCCCEEEEcCCCCHHHHHHHHHHCCC--ccCCccccCceEEeEEcCCCCccccccccCcHHHh
Confidence 678998 3 78999999999999999999999999873 33 34555678999999999999999999999999
Q ss_pred EeEEEEEcCCCcEEe-ccCCCCChHHHHhhcCCCCceEEEEEEEEeeecCceEEEEEEEecchhhHHHHHHHH
Q 042619 73 VVDARIVDARGRILD-REAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTLEQGATKILYKW 144 (402)
Q Consensus 73 v~~~~vv~~dG~~~~-~~~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (402)
|+++||||+||++++ ++.+|+|||||++||+ |+|||||++++|++|.|+....+.+.+....++.+.++.+
T Consensus 194 Vl~leVVtadGevv~~s~~~n~DLF~Av~Ggl-G~fGIIT~atlrL~Pap~~v~~~~~~y~~~~~~~~d~~~l 265 (525)
T PLN02441 194 VLELDVVTGKGEVVTCSPTQNSDLFFAVLGGL-GQFGIITRARIALEPAPKRVRWIRVLYSDFSTFTRDQERL 265 (525)
T ss_pred EEEEEEEeCCceEEEeCCCCChhHHHhhccCC-CCcEEEEEEEEEEEecCCceEEEEEEcCCHHHHHHHHHHH
Confidence 999999999999997 8888999999999987 8999999999999999997766666666444444333333
No 2
>PRK11282 glcE glycolate oxidase FAD binding subunit; Provisional
Probab=99.92 E-value=1.9e-24 Score=210.01 Aligned_cols=131 Identities=22% Similarity=0.351 Sum_probs=113.9
Q ss_pred CCCCCce-EEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeecc-CCCCcccchhhhcCCCCCCcccccccccccEeEEEE
Q 042619 1 LAKLRSI-EVDINNKTAWVQAGATIGELYYRISEKSNIHGFAA-GLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARI 78 (402)
Q Consensus 1 l~~~~~i-~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~-g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~v 78 (402)
|++||+| ++|+++.+|+|++|+++.||.++|.++|+.+++.+ ..++.++|||++++|++|+.+.+||..+|+|++++|
T Consensus 43 l~~ln~Ile~d~~~~~vtV~AG~~l~el~~~L~~~G~~lp~~p~~~~~~~TIGG~iatg~~G~~~~~yG~~~D~Vlg~~v 122 (352)
T PRK11282 43 TRAHRGIVSYDPTELVITARAGTPLAELEAALAEAGQMLPFEPPHFGGGATLGGMVAAGLSGPRRPWAGAVRDFVLGTRL 122 (352)
T ss_pred cccCCCcEEEcCCCCEEEECCCCCHHHHHHHHHHcCCeeCCCCCCcCCCcEehhHHhcCCCCccccccCCHHHhEeeEEE
Confidence 6899998 89999999999999999999999999986555533 345568899999999999999999999999999999
Q ss_pred EcCCCcEEe-c-----cCCCCChHHHHhhcCCCCceEEEEEEEEeeecCceEEEEEEEec
Q 042619 79 VDARGRILD-R-----EAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKT 132 (402)
Q Consensus 79 v~~dG~~~~-~-----~~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~~~~~~~~~~~~~ 132 (402)
|++||++++ . +..++||||+++|+. |+|||||+++||++|.|+....+.+.+.
T Consensus 123 V~~~Gei~~~gg~v~kn~~G~DL~~l~~Gs~-GtLGVitevtlkl~P~p~~~~t~~~~~~ 181 (352)
T PRK11282 123 INGRGEHLRFGGQVMKNVAGYDVSRLMAGSL-GTLGVLLEVSLKVLPRPRAELTLRLEMD 181 (352)
T ss_pred EcCCceEEEeCCcccCCCCCchHHHHHhhCC-chhhhheEEEEEEEecCceEEEEEEecC
Confidence 999999996 2 224689999999987 9999999999999999987655545443
No 3
>TIGR01678 FAD_lactone_ox sugar 1,4-lactone oxidases. This model represents a family of at least two different sugar 1,4 lactone oxidases, both involved in synthesizing ascorbic acid or a derivative. These include L-gulonolactone oxidase (EC 1.1.3.8) from rat and D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) from Saccharomyces cerevisiae. Members are proposed to have the cofactor FAD covalently bound at a site specified by Prosite motif PS00862; OX2_COVAL_FAD; 1.
Probab=99.92 E-value=4e-23 Score=207.51 Aligned_cols=139 Identities=27% Similarity=0.386 Sum_probs=118.5
Q ss_pred CCCCCce-EEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeec-cCCCCcccchhhhcCCCCCCcccccccccccEeEEEE
Q 042619 1 LAKLRSI-EVDINNKTAWVQAGATIGELYYRISEKSNIHGFA-AGLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARI 78 (402)
Q Consensus 1 l~~~~~i-~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~-~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~v 78 (402)
|++||+| ++|.++++|+||+|+++.+|.+.|.++|. +++ .|.++.++|||++++|+||. +.+||..+|+|++++|
T Consensus 63 l~~l~~i~~id~~~~~vtV~aG~~l~~L~~~L~~~Gl--~l~~~g~~~~~TvGG~iatg~hG~-~~~~G~~~d~V~~l~v 139 (438)
T TIGR01678 63 LDKMNKVLQFDKEKKQITVEAGIRLYQLHEQLDEHGY--SMSNLGSISEVSVAGIISTGTHGS-SIKHGILATQVVALTI 139 (438)
T ss_pred hhhcCCceEEcCCCCEEEEcCCCCHHHHHHHHHHcCC--EecCCCCCCCceeeehhcCCCCCC-ccccCcHHhhEEEEEE
Confidence 5689998 89999999999999999999999999984 454 78889999999999999996 7899999999999999
Q ss_pred EcCCCcEEe-ccCCCCChHHHHhhcCCCCceEEEEEEEEeeecCceEEEEEEEecchhhHHHHHHHHHHHH
Q 042619 79 VDARGRILD-REAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTLEQGATKILYKWQQVA 148 (402)
Q Consensus 79 v~~dG~~~~-~~~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (402)
|++||++++ ++.+++|||||.+|+. |+|||||++++|++|........ .. ....++++.|++..
T Consensus 140 V~~~G~i~~~s~~~~~dlf~a~~~~~-G~lGIIt~vtl~l~p~~~l~~~~--~~---~~~~~~~~~~~~~~ 204 (438)
T TIGR01678 140 MTADGEVLECSEERNADVFQAARVSL-GCLGIIVTVTIQVVPQFHLQETS--FV---STLKELLDNWDSHW 204 (438)
T ss_pred EcCCCcEEEeCCCCChhHHHHHhcCC-CceEeeEEEEEEEEeccceEEEE--ec---CCHHHHHHHHHHHh
Confidence 999999997 7778899999999987 89999999999999987654321 11 23446666666644
No 4
>COG0277 GlcD FAD/FMN-containing dehydrogenases [Energy production and conversion]
Probab=99.91 E-value=5.1e-23 Score=209.67 Aligned_cols=133 Identities=32% Similarity=0.429 Sum_probs=113.5
Q ss_pred CCCCCce-EEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccccccccEeEEEEE
Q 042619 1 LAKLRSI-EVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARIV 79 (402)
Q Consensus 1 l~~~~~i-~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~vv 79 (402)
|++||+| ++|+++++++||||+++.+|.++|.++|+.+++.+++..+++|||+++++++|..+.+||..+|+|++++||
T Consensus 81 l~~mn~i~~id~~~~~~~v~aGv~l~~l~~~l~~~G~~~p~~p~s~~~~tIGG~ia~~~~G~~~~~yG~~~d~v~~l~vV 160 (459)
T COG0277 81 LSRLNRILEIDPEDGTATVQAGVTLEDLEKALAPHGLFLPVDPSSSGTATIGGNIATNAGGLRSLRYGLTRDNVLGLRVV 160 (459)
T ss_pred chhhcchhccCcCCCEEEEcCCccHHHHHHHHHHcCCccCCCccccccceEccchhcCCCCccceecccHHHheeEEEEE
Confidence 5789999 799999999999999999999999999865433343334799999999999999999999999999999999
Q ss_pred cCCCcEEe-c-----cCCCCChHHHHhhcCCCCceEEEEEEEEeeecCceEEEEEEEecch
Q 042619 80 DARGRILD-R-----EAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTLE 134 (402)
Q Consensus 80 ~~dG~~~~-~-----~~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~~~~~~~~~~~~~~~ 134 (402)
++||++++ . +..+.||++++.|+. |+|||||++++|++|.|+........+...
T Consensus 161 ~~dG~i~~~~~~~~k~~~g~dl~~l~iGs~-GtlGiit~~tl~l~p~~~~~~~~~~~~~~~ 220 (459)
T COG0277 161 LPDGEILRLGRKLRKDNAGYDLTALFVGSE-GTLGIITEATLKLLPLPETKATAVAGFPSI 220 (459)
T ss_pred cCCceehhhcCcccCCCCCCCHHHhcccCC-ccceEEEEEEEEeccCCchheEEEEeCCCH
Confidence 99999996 2 244589999999765 999999999999999988766555555443
No 5
>PLN02805 D-lactate dehydrogenase [cytochrome]
Probab=99.90 E-value=2.8e-23 Score=213.31 Aligned_cols=141 Identities=21% Similarity=0.327 Sum_probs=122.6
Q ss_pred CCCCCce-EEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccccccccEeEEEEE
Q 042619 1 LAKLRSI-EVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARIV 79 (402)
Q Consensus 1 l~~~~~i-~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~vv 79 (402)
|++||+| ++|.++.+|+||||+++.+|+++|.++| +.+|...++.++|||+++++++|..+.+||..+|+|+++|||
T Consensus 184 l~~mn~I~~id~~~~~vtVeaGv~~~~L~~~L~~~G--l~~p~~p~~~~TIGG~ia~n~~G~~s~~yG~~~d~V~~levV 261 (555)
T PLN02805 184 MSLMKSVKALHVEDMDVVVEPGIGWLELNEYLEPYG--LFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVISLKVV 261 (555)
T ss_pred ccCCCCeEEEeCCCCEEEEeCCcCHHHHHHHHHHcC--CEeCCCCccccChhhHhhCCCcccccCccccHHHhEEEEEEE
Confidence 5789998 6999999999999999999999999998 556767777889999999999999999999999999999999
Q ss_pred cCCCcEEe--cc----CCCCChHHHHhhcCCCCceEEEEEEEEeeecCceEEEEEEEecchhhHHHHHHHH
Q 042619 80 DARGRILD--RE----AMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTLEQGATKILYKW 144 (402)
Q Consensus 80 ~~dG~~~~--~~----~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (402)
++||++++ ++ ..++||||+++|+. |+|||||++++|++|.|+......+.|+...++.+++..+
T Consensus 262 l~dG~iv~~~~~~~k~~~g~dL~~l~~Gse-GtLGIIT~~tlrl~p~P~~~~~~~~~f~~~~~a~~av~~i 331 (555)
T PLN02805 262 LPNGDVVKTASRARKSAAGYDLTRLVIGSE-GTLGVITEVTLRLQKIPQHSVVAMCNFPTIKDAADVAIAT 331 (555)
T ss_pred cCCceEEEecCccccCCCCccHHHHhccCC-CceEEEEEEEEEeecCCcceEEEEEEcCCHHHHHHHHHHH
Confidence 99999995 22 24689999999876 8999999999999999998777777777655555555443
No 6
>PRK11230 glycolate oxidase subunit GlcD; Provisional
Probab=99.88 E-value=2.6e-22 Score=205.01 Aligned_cols=143 Identities=22% Similarity=0.300 Sum_probs=121.1
Q ss_pred CCCCCce-EEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccccccccEeEEEEE
Q 042619 1 LAKLRSI-EVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARIV 79 (402)
Q Consensus 1 l~~~~~i-~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~vv 79 (402)
|++||+| ++|+++++|+||||+++.+|.++|.++|+.++..+++...++|||++++++.|..+.+||..+|+|++++||
T Consensus 106 l~~ln~I~~id~~~~~v~VeaGv~~~~L~~~l~~~Gl~~~~~p~s~~~~tvGG~ia~nagG~~~~~yG~~~d~v~~levV 185 (499)
T PRK11230 106 MARFNRILDINPVGRRARVQPGVRNLAISQAAAPHGLYYAPDPSSQIACSIGGNVAENAGGVHCLKYGLTVHNLLKVEIL 185 (499)
T ss_pred cccCCCceEEcCCCCEEEEcCCccHHHHHHHHHHcCCeeCCCCCccccceEcceeccCCCCccceeeCChhhheeEEEEE
Confidence 6899998 899999999999999999999999999864333344455678999999999999999999999999999999
Q ss_pred cCCCcEEe-cc----CCCCChHHHHhhcCCCCceEEEEEEEEeeecCceEEEEEEEecchhhHHHHHHHH
Q 042619 80 DARGRILD-RE----AMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTLEQGATKILYKW 144 (402)
Q Consensus 80 ~~dG~~~~-~~----~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (402)
++||++++ .. ..++||+|+++|+. |+|||||++++|++|.|+....+.+.|....++.+++..+
T Consensus 186 l~~G~i~~~~~~~~~~~g~dl~~l~~Gs~-GtlGIIt~atlkl~p~p~~~~~~~~~f~~~~~a~~~~~~~ 254 (499)
T PRK11230 186 TLDGEALTLGSDALDSPGFDLLALFTGSE-GMLGVVTEVTVKLLPKPPVARVLLASFDSVEKAGLAVGDI 254 (499)
T ss_pred cCCCcEEEeCCccCCCCccchHhhhccCC-CccEEEEEEEEEEEcCCcceEEEEEECCCHHHHHHHHHHH
Confidence 99999996 22 34789999999886 8999999999999999998777777776555555544443
No 7
>TIGR01676 GLDHase galactonolactone dehydrogenase. This model represents L-Galactono-gamma-lactone dehydrogenase (EC 1.3.2.3). This enzyme catalyzes the final step in ascorbic acid biosynthesis in higher plants. This protein is homologous to ascorbic acid biosynthesis enzymes of other species: L-gulono-gamma-lactone oxidase in rat and L-galactono-gamma-lactone oxidase in yeast. All three covalently bind the cofactor FAD.
Probab=99.88 E-value=2.5e-22 Score=203.37 Aligned_cols=140 Identities=24% Similarity=0.278 Sum_probs=117.2
Q ss_pred CCCCCce-EEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccccccccEeEEEEE
Q 042619 1 LAKLRSI-EVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARIV 79 (402)
Q Consensus 1 l~~~~~i-~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~vv 79 (402)
|++||+| +||+++++|+||||+++.||.++|.++|..+ ...|.++.++|||++++|+||.. .+||..+|+|++++||
T Consensus 110 L~~ln~Vl~vD~~~~tVtV~AG~~l~~L~~~L~~~Glal-~n~gsi~~~TIGGaiatgtHGtg-~~~G~l~d~V~~l~lV 187 (541)
T TIGR01676 110 LALMDKVLEVDEEKKRVRVQAGIRVQQLVDAIKEYGITL-QNFASIREQQIGGIIQVGAHGTG-AKLPPIDEQVIAMKLV 187 (541)
T ss_pred hhhCCCCEEEcCCCCEEEEcCCCCHHHHHHHHHHcCCEe-ccCCCCCCceEccccccCCcCCC-CCCCCHHHhEEEEEEE
Confidence 6789997 8999999999999999999999999998433 24578888999999999999985 4799999999999999
Q ss_pred cCCCcEEe-ccCCCCChHHHHhhcCCCCceEEEEEEEEeeecCceEEEEEEEecchhhHHHHHHHHHHHH
Q 042619 80 DARGRILD-REAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTLEQGATKILYKWQQVA 148 (402)
Q Consensus 80 ~~dG~~~~-~~~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (402)
++||++++ ++.+|+|||||+|||. |+|||||++|+|+.|.+..... .... ...++++.+.++.
T Consensus 188 ta~G~vv~~s~~~~pdLF~Aargsl-G~LGVItevTLr~~Pa~~l~~~-~~~~----~~~e~l~~~~~~~ 251 (541)
T TIGR01676 188 TPAKGTIEISKDKDPELFFLARCGL-GGLGVVAEVTLQCVERQELVEH-TFIS----NMKDIKKNHKKFL 251 (541)
T ss_pred ECCCCEEEECCCCCHHHHHHHhcCC-CceEeEEEEEEEEEeccceeEE-EEec----CHHHHHHHHHHHH
Confidence 99999997 7778999999999987 8999999999999999875322 1122 2345555555543
No 8
>TIGR01679 bact_FAD_ox FAD-linked oxidoreductase. This model represents a family of bacterial oxidoreductases with covalently linked FAD, closely related to two different eukaryotic oxidases, L-gulonolactone oxidase (EC 1.1.3.8) from rat and D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) from Saccharomyces cerevisiae.
Probab=99.87 E-value=6.7e-22 Score=198.33 Aligned_cols=122 Identities=25% Similarity=0.357 Sum_probs=108.2
Q ss_pred CCCCCce-EEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccccccccEeEEEEE
Q 042619 1 LAKLRSI-EVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARIV 79 (402)
Q Consensus 1 l~~~~~i-~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~vv 79 (402)
|++||+| ++|+++++|+||||+++.||.+.|.++|..++ ..|.+..++|||.+.+|+||. +.+||..+|+|++++||
T Consensus 57 l~~l~~i~~~d~~~~~v~v~aG~~l~~l~~~L~~~G~~l~-~~~~~~~~tvGG~ia~~~hG~-g~~~G~~~d~V~~l~vV 134 (419)
T TIGR01679 57 LTGLQGVVDVDQPTGLATVEAGTRLGALGPQLAQRGLGLE-NQGDIDPQSIGGALGTATHGT-GVRFQALHARIVSLRLV 134 (419)
T ss_pred hhHcCCceeecCCCCEEEEcCCCCHHHHHHHHHHcCCccc-cCCCCCCceeccceecCCCCC-CccCCchhhhEEEEEEE
Confidence 5789998 89999999999999999999999999985432 245566678999999999997 46899999999999999
Q ss_pred cCCCcEEe-ccCCCCChHHHHhhcCCCCceEEEEEEEEeeecCceEE
Q 042619 80 DARGRILD-REAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVT 125 (402)
Q Consensus 80 ~~dG~~~~-~~~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~~~~~~ 125 (402)
++||++++ ++.+|+|||||+|||+ |+|||||++|+|++|.+....
T Consensus 135 ~a~G~v~~~~~~~~~dLf~a~~g~~-G~lGVIt~vtl~~~p~~~~~~ 180 (419)
T TIGR01679 135 TAGGKVLDLSEGDDQDMYLAARVSL-GALGVISQVTLQTVALFRLRR 180 (419)
T ss_pred cCCCCEEEEcCCCCHHHHHHHHhCC-CceEEEEEEEEEeecceEeEE
Confidence 99999997 7778999999999987 899999999999999986543
No 9
>TIGR00387 glcD glycolate oxidase, subunit GlcD. This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity.
Probab=99.86 E-value=1.8e-21 Score=195.38 Aligned_cols=143 Identities=29% Similarity=0.353 Sum_probs=119.7
Q ss_pred CCCCCce-EEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccccccccEeEEEEE
Q 042619 1 LAKLRSI-EVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARIV 79 (402)
Q Consensus 1 l~~~~~i-~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~vv 79 (402)
|++||+| ++|+++.+++||||+++.+|.++|.++|+.+++.+++...++|||++.++++|..+.+||..+|+|++++||
T Consensus 48 l~~mn~i~~id~~~~~v~veaGv~~~~l~~~l~~~gl~~~~~p~s~~~~tiGG~ia~na~G~~~~~yG~~~d~v~~l~vV 127 (413)
T TIGR00387 48 FKHMNKILEIDVVNLTAVVQPGVRNLELEQAVEEHNLFYPPDPSSQISSTIGGNIAENAGGMRGLKYGTTVDYVLGLEVV 127 (413)
T ss_pred hHHcCceeEEcCCCCEEEEcCCccHHHHHHHHHHcCCeeCCCCcccccceehhhhhcCCCCCcceeeccHHhheeeEEEE
Confidence 5789998 899999999999999999999999999854333344445678999999999999999999999999999999
Q ss_pred cCCCcEEe-c-----cCCCCChHHHHhhcCCCCceEEEEEEEEeeecCceEEEEEEEecchhhHHHHHHHH
Q 042619 80 DARGRILD-R-----EAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTLEQGATKILYKW 144 (402)
Q Consensus 80 ~~dG~~~~-~-----~~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (402)
++||++++ . ...++||+|++.|+. |+|||||++++|++|.|+....+.+.|....++.+++..+
T Consensus 128 ~~~G~~~~~~~~~~~~~~g~dl~~l~~Gs~-GtlGiit~~~lkl~p~p~~~~~~~~~f~~~~~~~~~~~~~ 197 (413)
T TIGR00387 128 TADGEILRIGGKTAKDVAGYDLTGLFVGSE-GTLGIVTEATLKLLPKPENIVVALAFFDSIEKAMQAVYDI 197 (413)
T ss_pred eCCCCEEEeCCcccCCCCCCChhhhcccCC-ccceEEEEEEEEeecCCCccEEEEEECCCHHHHHHHHHHH
Confidence 99999996 2 234689999999876 8999999999999999998766666776555555554443
No 10
>TIGR01677 pln_FAD_oxido plant-specific FAD-dependent oxidoreductase. This model represents an uncharacterized plant-specific family of FAD-dependent oxidoreductases. At least seven distinct members are found in Arabidopsis thaliana. The family shows considerable sequence similarity to three different enzymes of ascorbic acid biosynthesis: L-galactono-1,4-lactone dehydrogenase (EC 1.3.2.3) from higher plants, D-arabinono-1,4-lactone oxidase (EC 1.1.3.37 from Saccharomyces cerevisiae, and L-gulonolactone oxidase (EC 1.1.3.8) from mouse, as well as to a bacterial sorbitol oxidase. The class of compound acted on by members of this family is unknown.
Probab=99.86 E-value=4.1e-21 Score=197.06 Aligned_cols=121 Identities=21% Similarity=0.260 Sum_probs=107.1
Q ss_pred CCCCCc-eEEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeecc-CCCCcccchhhhcCCCCCCcc-cccccccccEeEEE
Q 042619 1 LAKLRS-IEVDINNKTAWVQAGATIGELYYRISEKSNIHGFAA-GLCPSVGIGGHITGGGYGTMM-RKYGLAADNVVDAR 77 (402)
Q Consensus 1 l~~~~~-i~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~-g~~~~vgvgG~~~~gg~g~~~-~~~G~~~d~v~~~~ 77 (402)
|++||+ |++|.++++|+||+|+++.+|.+.|.++|+ +++. +.+..++|||.+.+|+||... ++||..+|+|++++
T Consensus 85 L~~Ln~il~iD~~~~tVtV~AG~~l~~L~~~L~~~Gl--al~~~~~~~~~TVGGaiatGthGs~~~~~~G~l~d~V~~l~ 162 (557)
T TIGR01677 85 TKRLNHVVAVDATAMTVTVESGMSLRELIVEAEKAGL--ALPYAPYWWGLTVGGMMGTGAHGSSLWGKGSAVHDYVVGIR 162 (557)
T ss_pred cccCCCCEEEeCCCCEEEECCCCcHHHHHHHHHHcCC--EeccCCCCCCeEeeEhhhCCCCCccccccccchhheEEEEE
Confidence 678999 599999999999999999999999999984 4543 345678999999999999766 68999999999999
Q ss_pred EEcCCC------cEEe-ccCCCCChHHHHhhcCCCCceEEEEEEEEeeecCceE
Q 042619 78 IVDARG------RILD-REAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATV 124 (402)
Q Consensus 78 vv~~dG------~~~~-~~~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~~~~~ 124 (402)
||++|| ++++ ++.+|+|||||+||++ |+|||||++|+|++|.+...
T Consensus 163 vV~a~G~a~G~~~v~~~s~~~~~dLf~a~rgsl-G~lGVVtevTL~~~P~~~~~ 215 (557)
T TIGR01677 163 LVVPASAAEGFAKVRILSEGDTPNEFNAAKVSL-GVLGVISQVTLALQPMFKRS 215 (557)
T ss_pred EEeCCCcccCcceEEEeCCCCCHHHHHhhccCC-CccEeeeEEEEEEEccccce
Confidence 999999 7776 7778899999999987 89999999999999987743
No 11
>KOG1231 consensus Proteins containing the FAD binding domain [Energy production and conversion]
Probab=99.85 E-value=9.8e-21 Score=181.92 Aligned_cols=118 Identities=25% Similarity=0.424 Sum_probs=103.6
Q ss_pred CCCce-EEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccccccccEeEEEEEcC
Q 042619 3 KLRSI-EVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARIVDA 81 (402)
Q Consensus 3 ~~~~i-~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~vv~~ 81 (402)
.|+++ .+..+...|.|+||..|-||.+++.++|..-...+...+ .+|||.++.+|+|....+||...+||++++|||+
T Consensus 121 ~~~~~~~~~~~~~yvdV~~g~~Widll~~t~e~GL~p~swtDyl~-ltVGGtlsnagiggqafRyGpqi~NV~~LdVVtg 199 (505)
T KOG1231|consen 121 LMKDVPVLVVDDLYVDVSAGTLWIDLLDYTLEYGLSPFSWTDYLP-LTVGGTLSNAGIGGQAFRYGPQISNVIELDVVTG 199 (505)
T ss_pred ccCCCceeecccceEEeeCChhHHHHHHHHHHcCCCccCcCCccc-eeecceeccCccccceeeccchhhceEEEEEEcC
Confidence 34555 466677999999999999999999999853233454555 7899999999999999999999999999999999
Q ss_pred CCcEEe-ccCCCCChHHHHhhcCCCCceEEEEEEEEeeecCc
Q 042619 82 RGRILD-REAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPA 122 (402)
Q Consensus 82 dG~~~~-~~~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~~~ 122 (402)
+|++++ ++..|++||.++.||- |+|||||+++++|+|+|+
T Consensus 200 kGeiv~cs~r~n~~lf~~vlGgl-GqfGIITrArI~le~aP~ 240 (505)
T KOG1231|consen 200 KGEIVTCSKRANSNLFFLVLGGL-GQFGIITRARIKLEPAPK 240 (505)
T ss_pred CCcEEecccccCceeeeeeeccC-cceeeEEEEEEEeccCCc
Confidence 999997 7789999999999886 999999999999999994
No 12
>PLN02465 L-galactono-1,4-lactone dehydrogenase
Probab=99.79 E-value=1.3e-18 Score=177.81 Aligned_cols=120 Identities=25% Similarity=0.342 Sum_probs=106.8
Q ss_pred CCCCCce-EEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeec-cCCCCcccchhhhcCCCCCCcccccccccccEeEEEE
Q 042619 1 LAKLRSI-EVDINNKTAWVQAGATIGELYYRISEKSNIHGFA-AGLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARI 78 (402)
Q Consensus 1 l~~~~~i-~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~-~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~v 78 (402)
|++||+| ++|.++++|+||+|+++.+|.+.|.++|.. ++ .|.....+|||.+.+|.||... ++|..+|+|++++|
T Consensus 145 L~~l~~Il~vD~e~~~VtV~AG~~l~~L~~~L~~~GLa--l~n~g~I~~~TIGGaIstGtHGtG~-~~g~i~d~V~~l~l 221 (573)
T PLN02465 145 LALMDKVLEVDKEKKRVTVQAGARVQQVVEALRPHGLT--LQNYASIREQQIGGFIQVGAHGTGA-RIPPIDEQVVSMKL 221 (573)
T ss_pred CcCCCCcEEEeCCCCEEEEccCCCHHHHHHHHHHcCCE--eccCCCCCCeeecchhhCCCCCcCC-CcCcHhheEEEEEE
Confidence 5789997 899999999999999999999999999844 43 4556677899999999999754 68999999999999
Q ss_pred EcCCCcEEe-ccCCCCChHHHHhhcCCCCceEEEEEEEEeeecCceE
Q 042619 79 VDARGRILD-REAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATV 124 (402)
Q Consensus 79 v~~dG~~~~-~~~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~~~~~ 124 (402)
|+++|++++ +..+++||||+.|++. |.|||||+++||+.|.+...
T Consensus 222 Vta~G~vv~~s~~~~pdLF~aar~gl-G~lGVIteVTLql~P~~~L~ 267 (573)
T PLN02465 222 VTPAKGTIELSKEDDPELFRLARCGL-GGLGVVAEVTLQCVPAHRLV 267 (573)
T ss_pred EECCCCEEEECCCCCHHHHhHhhccC-CCCcEEEEEEEEEEecCceE
Confidence 999999997 7777899999999887 89999999999999998753
No 13
>KOG1232 consensus Proteins containing the FAD binding domain [Energy production and conversion]
Probab=99.67 E-value=4.5e-15 Score=139.94 Aligned_cols=128 Identities=23% Similarity=0.360 Sum_probs=113.6
Q ss_pred CCCCCce-EEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccccccccEeEEEEE
Q 042619 1 LAKLRSI-EVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARIV 79 (402)
Q Consensus 1 l~~~~~i-~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~vv 79 (402)
|.+||+| +||+-.+++++.+||.+.++..+|.++|+.+++..|.-.+|-|||.++...-|..--+||..+-+|+++|+|
T Consensus 140 l~~mNKi~sfDevsGil~cdaG~ILen~d~~l~e~g~m~PlDLgAKgsCqiGG~vsTnAGGlrllRYGsLHgsvLGle~V 219 (511)
T KOG1232|consen 140 LGLMNKILSFDEVSGILKCDAGVILENADNFLAEKGYMFPLDLGAKGSCQIGGNVSTNAGGLRLLRYGSLHGSVLGLEVV 219 (511)
T ss_pred hhhhccccccccccceEEeccceEehhhHHHHHhcCceeeecCCCcccceecceeeccCCceEEEEecccccceeeeEEE
Confidence 4689999 799999999999999999999999999976666688888999999999999999999999999999999999
Q ss_pred cCCCcEEe------ccCCCCChHHHHhhcCCCCceEEEEEEEEeeecCceEEEEEE
Q 042619 80 DARGRILD------REAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTV 129 (402)
Q Consensus 80 ~~dG~~~~------~~~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~~~~~~~~~~ 129 (402)
+|+|+++. .+..+.||=-.+.|+ +|++||||++++-+.|.|..+....+
T Consensus 220 lp~G~vl~~~~slRKDNTgydlkhLFIGS-EGtlGVvT~vSil~~~kpksvn~af~ 274 (511)
T KOG1232|consen 220 LPNGTVLDLLSSLRKDNTGYDLKHLFIGS-EGTLGVVTKVSILAPPKPKSVNVAFI 274 (511)
T ss_pred cCCCchhhhhhhhcccCccccchhheecC-CceeeEEeeEEEeecCCCcceeEEEE
Confidence 99999994 345568888888866 59999999999999999987654333
No 14
>PF08031 BBE: Berberine and berberine like ; InterPro: IPR012951 This domain is found in the berberine bridge and berberine bridge-like enzymes, which are involved in the biosynthesis of numerous isoquinoline alkaloids. They catalyse the transformation of the N-methyl group of (S)-reticuline into the C-8 berberine bridge carbon of (S)-scoulerine [].; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 2IPI_A 2Y3S_A 2Y3R_D 2Y08_B 2Y4G_A 3D2H_A 3FW9_A 3FW8_A 3FWA_A 3D2J_A ....
Probab=99.65 E-value=4.2e-17 Score=111.65 Aligned_cols=47 Identities=53% Similarity=0.967 Sum_probs=34.5
Q ss_pred eeccccCCccCCCCCCCcchhcccccccccccccHHHHHHhhhccCCCCCCcCCCCCC
Q 042619 341 AYVNYRDLDLGLNKKFNTSYTEASAWGTKYFKDNFNRLVRVKIKVDPDNIFRHEQSIP 398 (402)
Q Consensus 341 ~Y~N~~d~~~~~~~~~~~~~~~~~~w~~~~~g~n~~rL~~iK~kyDP~~lF~~~~~i~ 398 (402)
+|+||+|.+++ .++|.+.|||+||+||++||++|||+|||+++|+|+
T Consensus 1 aY~Ny~d~~~~-----------~~~~~~~yyg~n~~rL~~iK~~yDP~n~F~~~q~I~ 47 (47)
T PF08031_consen 1 AYVNYPDPDLP-----------GDDWQEAYYGENYDRLRAIKRKYDPDNVFRFPQSIP 47 (47)
T ss_dssp --TTS--GGGG-----------SSHHHHHHHGGGHHHHHHHHHHH-TT-TS-STTS--
T ss_pred CcccCCCCccc-----------hhHHHHHHhchhHHHHHHHHHHhCccceeCCCCCcC
Confidence 59999998854 137999999999999999999999999999999996
No 15
>PF01565 FAD_binding_4: FAD binding domain This is only a subset of the Pfam family; InterPro: IPR006094 Various enzymes use FAD as a co-factor, most of these enzymes are oxygen-dependent oxidoreductases, containing a covalently bound FAD group which is attached to a histidine via an 8-alpha-(N3-histidyl)-riboflavin linkage. One of the enzymes Vanillyl-alcohol oxidase (VAO, 1.1.3.38 from EC) has a solved structure, the alignment includes the FAD binding site, called the PP-loop, between residues 99-110 []. The FAD molecule is covalently bound in the known structure, however the residue that links to the FAD is not in the alignment. VAO catalyses the oxidation of a wide variety of substrates, ranging from aromatic amines to 4-alkylphenols. ; GO: 0008762 UDP-N-acetylmuramate dehydrogenase activity, 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZR6_A 3HSU_A 2AXR_A 3D2J_A 3D2H_A 3FW9_A 3FW8_A 3FW7_A 3GSY_A 3FWA_A ....
Probab=99.61 E-value=1.3e-15 Score=130.00 Aligned_cols=87 Identities=36% Similarity=0.561 Sum_probs=78.4
Q ss_pred CCCCCc-eEEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccccccccEeEEEEE
Q 042619 1 LAKLRS-IEVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARIV 79 (402)
Q Consensus 1 l~~~~~-i~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~vv 79 (402)
|++||+ +++|++.++++||+|+++.||.++|.++|..+.+.++.+..+++||++.+|++|..++.||..+|+|+++++|
T Consensus 50 ~~~l~~i~~id~~~~~v~v~aG~~~~~l~~~l~~~g~~~~~~~~~~~~~tvGG~i~~~~~g~~~~~~G~~~d~v~~~~~V 129 (139)
T PF01565_consen 50 MSRLNKIIEIDPENGTVTVGAGVTWGDLYEALAPRGLMLPVEPGSGIPGTVGGAIAGNGHGSGSRRYGTAADNVLSVEVV 129 (139)
T ss_dssp CTTCGCEEEEETTTTEEEEETTSBHHHHHHHHHHHTEEESSGGGSTTTSBHHHHHHTT-EETTHHHHCBGGGGEEEEEEE
T ss_pred eccccccccccccceeEEEeccccchhcccccccccccccccccccccceEchhhcCCCccccccccccHHHeEEEEEEE
Confidence 578999 5899999999999999999999999998854433477888889999999999999999999999999999999
Q ss_pred cCCCcEEe
Q 042619 80 DARGRILD 87 (402)
Q Consensus 80 ~~dG~~~~ 87 (402)
++||++++
T Consensus 130 ~~~G~v~~ 137 (139)
T PF01565_consen 130 LADGEVVR 137 (139)
T ss_dssp ETTSSEEE
T ss_pred cCCCcEEE
Confidence 99999986
No 16
>KOG1262 consensus FAD-binding protein DIMINUTO [General function prediction only]
Probab=99.57 E-value=5e-15 Score=140.13 Aligned_cols=116 Identities=25% Similarity=0.361 Sum_probs=106.3
Q ss_pred EEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccccccccEeEEEEEcCCCcEEe
Q 042619 8 EVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARIVDARGRILD 87 (402)
Q Consensus 8 ~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~vv~~dG~~~~ 87 (402)
++|.++.||+|+|+|+++++.++|.+.|..+++ .....+.++||++.|-|+-..|++||+..|-+.+.|||+|||++++
T Consensus 116 eld~ekmtvrvEP~Vtmgqis~~lip~g~tLaV-~~EldDlTvGGLinG~Gies~ShkyGlfq~~~~aYEvVladGelv~ 194 (543)
T KOG1262|consen 116 ELDEEKMTVRVEPLVTMGQISKFLIPKGYTLAV-LPELDDLTVGGLINGVGIESSSHKYGLFQHICTAYEVVLADGELVR 194 (543)
T ss_pred hcchhcceEEecCCccHHHHHHHhccCCceeee-ecccccceecceeeecccccccchhhhHHhhhheeEEEecCCeEEE
Confidence 899999999999999999999999999977754 5567778999999999999999999999999999999999999996
Q ss_pred --ccCCCCChHHHHhhcCCCCceEEEEEEEEeeecCceEE
Q 042619 88 --REAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVT 125 (402)
Q Consensus 88 --~~~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~~~~~~ 125 (402)
.+++++|||.|+..+- |++|..+.+++|+.|.-+.+.
T Consensus 195 ~t~dne~sdLfyaiPWSq-GTlgfLVaatiriIkvK~Yvk 233 (543)
T KOG1262|consen 195 VTPDNEHSDLFYAIPWSQ-GTLGFLVAATIRIIKVKKYVK 233 (543)
T ss_pred ecCCcccCceEEEccccc-CchheeeeeEEEEEeccceEE
Confidence 4558999999999887 899999999999999988654
No 17
>KOG4730 consensus D-arabinono-1, 4-lactone oxidase [Defense mechanisms]
Probab=99.53 E-value=4.1e-14 Score=136.67 Aligned_cols=128 Identities=24% Similarity=0.296 Sum_probs=107.7
Q ss_pred CCCCCce-EEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccccccccEeEEEEE
Q 042619 1 LAKLRSI-EVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARIV 79 (402)
Q Consensus 1 l~~~~~i-~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~vv 79 (402)
|.+||+| ++|++..++|||+|+++.+|.+++.+.|+.+. -.+.-..++|||++..|.||....-+++....++-..++
T Consensus 98 l~~lnkVv~~dpe~~tvTV~aGirlrQLie~~~~~GlsL~-~~~si~e~sVgGii~TGaHGSS~~vH~~v~~i~~v~~~~ 176 (518)
T KOG4730|consen 98 LDKLNKVVEFDPELKTVTVQAGIRLRQLIEELAKLGLSLP-NAPSISEQSVGGIISTGAHGSSLWVHDYVSEIISVSPIT 176 (518)
T ss_pred hhhhccceeeCchhceEEeccCcCHHHHHHHHHhcCcccc-CCCceecceeeeEEecccCCCccccCcccceeEEEeeec
Confidence 4679997 89999999999999999999999999885432 245556688999999999998777667666666667777
Q ss_pred cCCCcEEe-ccCCCCChHHHHhhcCCCCceEEEEEEEEeeecCceEEEEEEE
Q 042619 80 DARGRILD-REAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVS 130 (402)
Q Consensus 80 ~~dG~~~~-~~~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~~~~~~~~~~~ 130 (402)
.+||.++. +++..||+|.|.+-+- |-+|||.++|+++.|.-+...++.+.
T Consensus 177 ~~~G~v~~Ls~e~dpe~F~AAkvSL-G~LGVIs~VTl~~vp~Fk~s~t~~v~ 227 (518)
T KOG4730|consen 177 PADGFVVVLSEEKDPELFNAAKVSL-GVLGVISQVTLSVVPAFKRSLTYVVT 227 (518)
T ss_pred cCCceEEEecccCCHHHHhhhhhcc-cceeEEEEEEEEEEecceeeeEEEEe
Confidence 89999876 7778899999999998 89999999999999998877665554
No 18
>PRK11183 D-lactate dehydrogenase; Provisional
Probab=99.49 E-value=1.1e-13 Score=139.01 Aligned_cols=142 Identities=17% Similarity=0.192 Sum_probs=113.2
Q ss_pred CCCCCce-EEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeeccCCC-CcccchhhhcCCCCCCcccccccccccEeEEEE
Q 042619 1 LAKLRSI-EVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLC-PSVGIGGHITGGGYGTMMRKYGLAADNVVDARI 78 (402)
Q Consensus 1 l~~~~~i-~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~g~~-~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~v 78 (402)
|++||+| +|| ++.+++|||||++.+|.++|.++|.......|+| -.++|||.+..+..|....+||...++++. ++
T Consensus 94 l~RMNrIleID-~~~~VvVePGVtl~~LeeaLk~~Gl~p~sd~GSS~IGasIGGnIAtNAGG~~vlRgga~te~vL~-~~ 171 (564)
T PRK11183 94 TLRLDKIQLLN-NGKQVLALPGTTLYQLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGALVQRGPAYTEMALY-AQ 171 (564)
T ss_pred hhHcCCcEEEC-CCCeEEEeCCCcHHHHHHHHHHhCCCCCCcccccccCCCCccceEECCcchhheEcchhhhhhhh-hE
Confidence 5789999 688 5688999999999999999999985422212332 245689999999999999999999999999 99
Q ss_pred EcCCCcE-------Ee--c---------cCCCC----------------------------------ChHHHH--hhcCC
Q 042619 79 VDARGRI-------LD--R---------EAMGE----------------------------------DLFWAI--RGGGG 104 (402)
Q Consensus 79 v~~dG~~-------~~--~---------~~~~~----------------------------------dLf~a~--~G~g~ 104 (402)
|++||++ +. . +..+. ||...+ .|+-
T Consensus 172 V~~dGel~lVn~lgi~lG~~~e~il~~l~~~gy~~~~~~~~~~~~~d~~y~~~vr~v~~~~parfnaDl~~LfeasGse- 250 (564)
T PRK11183 172 IDEDGKLELVNHLGIDLGETPEEILTRLEDGRFDDEDVRHDGRHASDHEYAERVRDVDADTPARFNADPRRLFEASGCA- 250 (564)
T ss_pred ECCCCcEEEeeccCcccCCCHHHHHHhhhcCCCCccccCCccccCchhhHHHhhhccCCCCcccccCCHHHHhhccCCC-
Confidence 9999999 32 1 11223 888877 7665
Q ss_pred CCceEEEEEEEEeeecCceEEEEEEEecchhhHHHHHHHHHH
Q 042619 105 GSFGIILAWKVKLVPVPATVTVFTVSKTLEQGATKILYKWQQ 146 (402)
Q Consensus 105 g~~Gvvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (402)
|++||+ +++++++|.|+....+.+.++..+.+.++.+.+..
T Consensus 251 GkLgV~-avrLdtfp~p~~~~vf~ig~n~~~~~~~~rr~il~ 291 (564)
T PRK11183 251 GKLAVF-AVRLDTFPAEKNTQVFYIGTNDPAVLTEIRRHILA 291 (564)
T ss_pred ceEEEE-EEEeccccCCCcceEEEEeCCCHHHHHHHHHHHHH
Confidence 999999 99999999999988888888877666666555443
No 19
>PRK13905 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=99.40 E-value=2.9e-13 Score=130.02 Aligned_cols=110 Identities=28% Similarity=0.293 Sum_probs=83.5
Q ss_pred CC-CCceEEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccc-cccccEeEEEEE
Q 042619 2 AK-LRSIEVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYG-LAADNVVDARIV 79 (402)
Q Consensus 2 ~~-~~~i~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G-~~~d~v~~~~vv 79 (402)
++ |++|++ ++.+++||+|+.+.+|.+++.++|. .|.+..+++.| +.||+++...+.|| ..+|+|++++||
T Consensus 81 ~~~l~~i~~--~~~~v~v~aG~~~~~L~~~l~~~Gl-----~gle~~~gipG-TVGGai~~NaG~~G~~~~d~v~~v~vv 152 (298)
T PRK13905 81 GKGLNEIEV--EGNRITAGAGAPLIKLARFAAEAGL-----SGLEFAAGIPG-TVGGAVFMNAGAYGGETADVLESVEVL 152 (298)
T ss_pred cCCcceEEe--cCCEEEEECCCcHHHHHHHHHHcCC-----CcchhccCCCc-chhHHHHHcCCcCceEhheeEEEEEEE
Confidence 44 777744 5679999999999999999999985 12333333333 33444444455576 799999999999
Q ss_pred cCCCcEEeccCCCCChHHHHhhcCCC-CceEEEEEEEEeeecC
Q 042619 80 DARGRILDREAMGEDLFWAIRGGGGG-SFGIILAWKVKLVPVP 121 (402)
Q Consensus 80 ~~dG~~~~~~~~~~dLf~a~~G~g~g-~~Gvvt~~~~~~~~~~ 121 (402)
++||++++.. +.|++|++|++..+ .+||||+++||++|..
T Consensus 153 ~~~G~~~~~~--~~e~~~~yR~s~~~~~~gII~~~~l~l~~~~ 193 (298)
T PRK13905 153 DRDGEIKTLS--NEELGFGYRHSALQEEGLIVLSATFQLEPGD 193 (298)
T ss_pred eCCCCEEEEE--HHHcCCcCccccCCCCCEEEEEEEEEEcCCC
Confidence 9999999733 35999999987633 3899999999999974
No 20
>KOG1233 consensus Alkyl-dihydroxyacetonephosphate synthase [General function prediction only]
Probab=99.20 E-value=3.5e-11 Score=114.15 Aligned_cols=129 Identities=26% Similarity=0.356 Sum_probs=108.8
Q ss_pred CCCCCce-EEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeeccCCCC----cccchhhhcCCCCCCcccccccccccEeE
Q 042619 1 LAKLRSI-EVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCP----SVGIGGHITGGGYGTMMRKYGLAADNVVD 75 (402)
Q Consensus 1 l~~~~~i-~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~g~~~----~vgvgG~~~~gg~g~~~~~~G~~~d~v~~ 75 (402)
++.||+| =+|.++.|+.+++|++-.+|.++|.+.|+. .|..| -.++||++.....|.--+.||..-|-|+-
T Consensus 215 tsqmnriLWidreNLT~~~eaGIvGQ~LERqL~~~G~t----~GHEPDS~EFSTlGGWVsTRASGMKKN~YGNIEDLVVh 290 (613)
T KOG1233|consen 215 TSQMNRILWIDRENLTCRAEAGIVGQSLERQLNKKGFT----CGHEPDSIEFSTLGGWVSTRASGMKKNKYGNIEDLVVH 290 (613)
T ss_pred HHhhhheeEeccccceEEEecCcchHHHHHHHhhcCcc----cCCCCCceeeecccceeeeccccccccccCChhHheEE
Confidence 4689998 589999999999999999999999998842 34443 34689999999999999999999999999
Q ss_pred EEEEcCCCcEEe-----ccCCCCChHHHHhhcCCCCceEEEEEEEEeeecCceEEEEEEEecch
Q 042619 76 ARIVDARGRILD-----REAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTLE 134 (402)
Q Consensus 76 ~~vv~~dG~~~~-----~~~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~~~~~~~~~~~~~~~ 134 (402)
+++|++.|.+-. .-+.+||+---+.|. +|++||||++++|..|+|+....-++.|+..
T Consensus 291 ~~mVtP~Giiek~Cq~PRmS~GPDihh~IlGS-EGTLGVitEvtiKirPiPe~~ryGS~aFPNF 353 (613)
T KOG1233|consen 291 LNMVTPKGIIEKQCQVPRMSSGPDIHHIILGS-EGTLGVITEVTIKIRPIPEVKRYGSFAFPNF 353 (613)
T ss_pred EEeecCcchhhhhhcCCcccCCCCcceEEecc-CcceeEEEEEEEEEeechhhhhcCccccCcH
Confidence 999999998873 123579988888866 5999999999999999998766656666543
No 21
>PRK14652 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=98.96 E-value=1.1e-09 Score=105.02 Aligned_cols=102 Identities=25% Similarity=0.208 Sum_probs=78.0
Q ss_pred CCCCEEEEcCCCCHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcc-cccccccccEeEEEEEcCCCcEEecc
Q 042619 11 INNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMM-RKYGLAADNVVDARIVDARGRILDRE 89 (402)
Q Consensus 11 ~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~g~~~~vgvgG~~~~gg~g~~~-~~~G~~~d~v~~~~vv~~dG~~~~~~ 89 (402)
.++.+++||||+.+.+|.+++.++|.. |....+|+.| +.||+...++ ..+|..+|+|+++++|++|| .++..
T Consensus 94 ~~~~~v~v~AG~~~~~L~~~~~~~GL~-----GlE~l~gIPG-TvGGav~mNaGa~ggei~d~v~~v~vv~~~G-~~~~~ 166 (302)
T PRK14652 94 TDGGRLVLGAGAPISRLPARAHAHGLV-----GMEFLAGIPG-TLGGAVAMNAGTKLGEMKDVVTAVELATADG-AGFVP 166 (302)
T ss_pred ecCCEEEEECCCcHHHHHHHHHHcCCc-----ccccccCCCc-chhHHHHHcCCCCceEhhheEEEEEEECCCC-cEEee
Confidence 345699999999999999999999842 5666666655 5555555554 47789999999999999999 44322
Q ss_pred CCCCChHHHHhhcCCCCceEEEEEEEEeeecC
Q 042619 90 AMGEDLFWAIRGGGGGSFGIILAWKVKLVPVP 121 (402)
Q Consensus 90 ~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~~ 121 (402)
..|+.|++|+..=+.-||||+++||++|..
T Consensus 167 --~~e~~f~YR~s~~~~~~II~~a~~~L~~~~ 196 (302)
T PRK14652 167 --AAALGYAYRTCRLPPGAVITRVEVRLRPGD 196 (302)
T ss_pred --hhhcCcccceeccCCCeEEEEEEEEEecCC
Confidence 369999999753112389999999999854
No 22
>PRK13903 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=98.89 E-value=4.8e-09 Score=102.66 Aligned_cols=110 Identities=23% Similarity=0.281 Sum_probs=83.2
Q ss_pred CCceEEeCCCCEEEEcCCCCHHHHHHHHHhcCCc-eeeccCCCCcccchhhhcCCCCCCcccccccccccEeEEEEEcCC
Q 042619 4 LRSIEVDINNKTAWVQAGATIGELYYRISEKSNI-HGFAAGLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARIVDAR 82 (402)
Q Consensus 4 ~~~i~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~-~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~vv~~d 82 (402)
++.|+++.+..+++|++|+.|.+|.+++.++|.. +-...|...+||-+...-.|++|. ...|.|.++++++.+
T Consensus 84 ~~~i~i~~~~~~v~vgAG~~~~~l~~~a~~~GL~GlE~laGIPGTVGGAv~mNaGayG~------ei~D~l~sV~vvd~~ 157 (363)
T PRK13903 84 TRGVTVDCGGGLVRAEAGAVWDDVVARTVEAGLGGLECLSGIPGSAGATPVQNVGAYGQ------EVSDTITRVRLLDRR 157 (363)
T ss_pred CCcEEEeCCCCEEEEEcCCCHHHHHHHHHHcCCccccccCCCCcchhhHhhcCCChhHH------HHhhhEeEEEEEECC
Confidence 4778777667899999999999999999999852 335566666665444444444332 557999999999855
Q ss_pred -CcEEeccCCCCChHHHHhhc--CCCCceEEEEEEEEeeecC
Q 042619 83 -GRILDREAMGEDLFWAIRGG--GGGSFGIILAWKVKLVPVP 121 (402)
Q Consensus 83 -G~~~~~~~~~~dLf~a~~G~--g~g~~Gvvt~~~~~~~~~~ 121 (402)
|++++.. +.||+|+.|++ .+++++|||+++||++|..
T Consensus 158 ~G~~~~~~--~~el~f~YR~S~f~~~~~~IIl~a~f~L~~~~ 197 (363)
T PRK13903 158 TGEVRWVP--AADLGFGYRTSVLKHSDRAVVLEVEFQLDPSG 197 (363)
T ss_pred CCEEEEEE--HHHcceeccccccCCCCCEEEEEEEEEEEcCC
Confidence 9999733 46999999985 1135789999999999863
No 23
>TIGR00179 murB UDP-N-acetylenolpyruvoylglucosamine reductase. This model describes MurB, UDP-N-acetylenolpyruvoylglucosamine reductase, which is also called UDP-N-acetylmuramate dehydrogenase. It is part of the pathway for the biosynthesis of the UDP-N-acetylmuramoyl-pentapeptide that is a precursor of bacterial peptidoglycan.
Probab=98.88 E-value=2.9e-09 Score=101.54 Aligned_cols=110 Identities=25% Similarity=0.228 Sum_probs=88.3
Q ss_pred CCCCCceEEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccccccc-cEeEEEEE
Q 042619 1 LAKLRSIEVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYGLAAD-NVVDARIV 79 (402)
Q Consensus 1 l~~~~~i~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d-~v~~~~vv 79 (402)
|++|+++.+++ ..+++||+|+.+.+|.+++.++|. .|.+..+|+.| +.||+.+..++.||..++ .|++++||
T Consensus 62 l~~~~~~~~~~-~~~v~v~aG~~~~~l~~~~~~~Gl-----~GlE~l~giPG-tvGGai~mNAGayG~~i~d~l~~v~vv 134 (284)
T TIGR00179 62 LGKGIDIEDDE-GEYVHVGGGENWHKLVKYALKNGL-----SGLEFLAGIPG-TVGGAVIMNAGAYGVEISEVLVYATIL 134 (284)
T ss_pred CCCCceEEEec-CCEEEEEcCCcHHHHHHHHHHCCC-----cccccCCCCCc-hHHHHHHHhcccchhehhheEEEEEEE
Confidence 45778887666 679999999999999999999873 37788888877 688888889999999997 57999999
Q ss_pred cCCCcEEeccCCCCChHHHHhhcCC-CCc-eEEEEEEEEeee
Q 042619 80 DARGRILDREAMGEDLFWAIRGGGG-GSF-GIILAWKVKLVP 119 (402)
Q Consensus 80 ~~dG~~~~~~~~~~dLf~a~~G~g~-g~~-Gvvt~~~~~~~~ 119 (402)
++||++++.. +.|+.|+.|-..= ... .||+++++++.+
T Consensus 135 ~~~G~~~~~~--~~~~~f~YR~S~f~~~~~~iil~a~~~l~~ 174 (284)
T TIGR00179 135 LATGKTEWLT--NEQLGFGYRTSIFQHKYVGLVLKAEFQLTL 174 (284)
T ss_pred eCCCCEEEEE--HHHccccCCccccCCCCcEEEEEEEEEecc
Confidence 9999999733 3588888884320 011 699999999844
No 24
>PRK13906 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=98.86 E-value=2.8e-09 Score=102.55 Aligned_cols=110 Identities=24% Similarity=0.232 Sum_probs=83.8
Q ss_pred CCCCCceEEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccc-cccccEeEEEEE
Q 042619 1 LAKLRSIEVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYG-LAADNVVDARIV 79 (402)
Q Consensus 1 l~~~~~i~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G-~~~d~v~~~~vv 79 (402)
|++|++|+++. .+++||+|+.+.+|.+++.++|. .|....+|+.| +.||+...+.+.|| ..+|+|++++||
T Consensus 86 l~~l~~i~~~~--~~v~v~aG~~~~~l~~~~~~~Gl-----~GlE~~~gIPG-tVGGav~mNaGayGg~i~D~l~~v~vv 157 (307)
T PRK13906 86 LLSLDHIEVSD--DAIIAGSGAAIIDVSRVARDYAL-----TGLEFACGIPG-SIGGAVYMNAGAYGGEVKDCIDYALCV 157 (307)
T ss_pred ecCccceEEeC--CEEEEECCCcHHHHHHHHHHcCC-----ccchhhcCCCc-cHhHHHHhhCCcchhhhhhheeEEEEE
Confidence 35688887753 58999999999999999999874 24455556666 56666666677785 889999999999
Q ss_pred cCCCcEEeccCCCCChHHHHhhcCCC-CceEEEEEEEEeeec
Q 042619 80 DARGRILDREAMGEDLFWAIRGGGGG-SFGIILAWKVKLVPV 120 (402)
Q Consensus 80 ~~dG~~~~~~~~~~dLf~a~~G~g~g-~~Gvvt~~~~~~~~~ 120 (402)
++||++++.. ..|+.|+.|-..=- .--||++++|++.|.
T Consensus 158 ~~~G~~~~~~--~~e~~f~YR~S~~~~~~~ii~~~~~~l~~~ 197 (307)
T PRK13906 158 NEQGSLIKLT--TKELELDYRNSIIQKEHLVVLEAAFTLAPG 197 (307)
T ss_pred eCCCCEEEEE--HHHccCcCCcccCCCCCEEEEEEEEEECCC
Confidence 9999999733 25788899843211 113999999999863
No 25
>PRK12436 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=98.84 E-value=5.4e-09 Score=100.55 Aligned_cols=109 Identities=21% Similarity=0.216 Sum_probs=79.5
Q ss_pred CCCCCceEEeCCCCEEEEcCCCCHHHHHHHHHhcCC-ceeeccCCCCcccchhhhcCCCCCCcccccc-cccccEeEEEE
Q 042619 1 LAKLRSIEVDINNKTAWVQAGATIGELYYRISEKSN-IHGFAAGLCPSVGIGGHITGGGYGTMMRKYG-LAADNVVDARI 78 (402)
Q Consensus 1 l~~~~~i~~d~~~~~~~v~~G~~~~~l~~~l~~~~~-~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G-~~~d~v~~~~v 78 (402)
|++|++|+++ ..+++||+|+.+.+|.+++.++|. ++.++.|...+ |||.+.++ .+.|| ...|.+.+++|
T Consensus 86 l~~l~~i~~~--~~~v~v~aG~~~~~L~~~~~~~gl~Gle~~~giPGt--VGGav~~N-----AGayG~~~~dvl~~v~v 156 (305)
T PRK12436 86 LIHITGVTVT--GTTIVAQCGAAIIDVSRIALDHNLTGLEFACGIPGS--VGGALYMN-----AGAYGGEISFVLTEAVV 156 (305)
T ss_pred eCCcCcEEEe--CCEEEEEeCCcHHHHHHHHHHcCCccchhhcCCccc--hhHHHHhc-----CccchhehheeeeEEEE
Confidence 3567888765 568999999999999999999975 22334443333 45555543 33466 66688889999
Q ss_pred EcCCCcEEeccCCCCChHHHHhhcCC-CCceEEEEEEEEeeec
Q 042619 79 VDARGRILDREAMGEDLFWAIRGGGG-GSFGIILAWKVKLVPV 120 (402)
Q Consensus 79 v~~dG~~~~~~~~~~dLf~a~~G~g~-g~~Gvvt~~~~~~~~~ 120 (402)
|++||++++.. +.|+.|+.|.+.= ....||++++||+.+.
T Consensus 157 v~~~G~v~~~~--~~e~~f~YR~s~~~~~~~iil~a~~~l~~~ 197 (305)
T PRK12436 157 MTGDGELRTLT--KEAFEFGYRKSVFANNHYIILEARFELEEG 197 (305)
T ss_pred EeCCCCEEEEE--HHHhcCcCCCCcCCCCCEEEEEEEEEEcCC
Confidence 99999999733 3589999996521 2246999999999875
No 26
>PRK14649 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=98.56 E-value=1.2e-07 Score=90.93 Aligned_cols=109 Identities=21% Similarity=0.242 Sum_probs=84.5
Q ss_pred ceEEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccccccccEeEEEEEcCCCcE
Q 042619 6 SIEVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARIVDARGRI 85 (402)
Q Consensus 6 ~i~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~vv~~dG~~ 85 (402)
++..+.+..+++|++|+.|.+|..++.++|. .|....+||.|.+.|...+......+..+|.|.++++++.+|++
T Consensus 76 ~i~~~~~~~~v~v~AG~~~~~l~~~~~~~GL-----~GlE~l~GIPGTvGGa~~mNaGayg~ei~d~l~~V~~~~~~g~~ 150 (295)
T PRK14649 76 ELHEHGDTAEVWVEAGAPMAGTARRLAAQGW-----AGLEWAEGLPGTIGGAIYGNAGCYGGDTATVLIRAWLLLNGSEC 150 (295)
T ss_pred EEEEeCCcEEEEEEcCCcHHHHHHHHHHcCC-----ccccccCCCCcchhHHHHhhccccceEhheeEEEEEEEeCCCCE
Confidence 5555555558999999999999999999883 45667888988555558888888888999999999999999999
Q ss_pred EeccCCCCChHHHHhhcCCCC---------ceEEEEEEEEeeecC
Q 042619 86 LDREAMGEDLFWAIRGGGGGS---------FGIILAWKVKLVPVP 121 (402)
Q Consensus 86 ~~~~~~~~dLf~a~~G~g~g~---------~Gvvt~~~~~~~~~~ 121 (402)
++-. ..||+|+.|-..--. --||++++|++.|..
T Consensus 151 ~~~~--~~el~f~YR~S~~~~~~~~~~~~~~~ii~~~~~~l~~~~ 193 (295)
T PRK14649 151 VEWS--VHDFAYGYRTSVLKQLRADGITWRPPLVLAARFRLHRDD 193 (295)
T ss_pred EEEe--HHHcCcccceeecccccccccccCCeEEEEEEEEECCCC
Confidence 9732 249999998542111 128999999998753
No 27
>PRK14653 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=98.27 E-value=1.7e-06 Score=82.76 Aligned_cols=107 Identities=23% Similarity=0.336 Sum_probs=75.9
Q ss_pred CCCCceEEeCCCCEEEEcCCCCHHHHHHHHHhcCCc-eeeccCCCCcccchhhhcCCCCCCccccccc-ccccEeEEEEE
Q 042619 2 AKLRSIEVDINNKTAWVQAGATIGELYYRISEKSNI-HGFAAGLCPSVGIGGHITGGGYGTMMRKYGL-AADNVVDARIV 79 (402)
Q Consensus 2 ~~~~~i~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~-~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~-~~d~v~~~~vv 79 (402)
++|+.|+++ +..++|++|+.+.+|..++.++|.. +-+-.|. |. +|||.+.++.- .||. ..|.|.+++++
T Consensus 83 ~~~~~i~i~--~~~v~v~AG~~l~~L~~~~~~~GL~GlE~l~gI-PG-TVGGAv~mNAG-----ayG~ei~d~l~~V~~~ 153 (297)
T PRK14653 83 ERLDDIFVD--NDKIICESGLSLKKLCLVAAKNGLSGFENAYGI-PG-SVGGAVYMNAG-----AYGWETAENIVEVVAY 153 (297)
T ss_pred CCcCceEEe--CCEEEEeCCCcHHHHHHHHHHCCCcchhhhcCC-ch-hHHHHHHHhCc-----cCchhhheeEEEEEEE
Confidence 458888876 3689999999999999999999852 2112222 11 16666666544 4888 88999999999
Q ss_pred cCCCcEEeccCCCCChHHHHhhcC---CCCceEEEEEEEEeeecC
Q 042619 80 DARGRILDREAMGEDLFWAIRGGG---GGSFGIILAWKVKLVPVP 121 (402)
Q Consensus 80 ~~dG~~~~~~~~~~dLf~a~~G~g---~g~~Gvvt~~~~~~~~~~ 121 (402)
+ +|++++.. ..|+-|..|-.. ++.+ |||+++||+.|..
T Consensus 154 d-~g~v~~~~--~~e~~f~YR~S~~~~~~~~-iI~~a~f~L~~~~ 194 (297)
T PRK14653 154 D-GKKIIRLG--KNEIKFSYRNSIFKEEKDL-IILRVTFKLKKGN 194 (297)
T ss_pred C-CCEEEEEc--hhhccccCccccCCCCCcE-EEEEEEEEEecCC
Confidence 9 78888632 237777777431 1133 9999999999853
No 28
>PRK14650 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=97.86 E-value=3.1e-05 Score=74.06 Aligned_cols=110 Identities=15% Similarity=0.161 Sum_probs=77.1
Q ss_pred CCCceEEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccc-cccccEeEEEEEcC
Q 042619 3 KLRSIEVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYG-LAADNVVDARIVDA 81 (402)
Q Consensus 3 ~~~~i~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G-~~~d~v~~~~vv~~ 81 (402)
+|+.|+++. ..++|++|+.|.+|..++.++|. .|...-+||.|.+.|.-.. ..+.|| -..|.|.++++++.
T Consensus 85 ~~~~i~~~~--~~v~a~AG~~~~~l~~~~~~~gl-----~GlE~l~gIPGTVGGAv~m-NAGayG~ei~d~l~sV~~~d~ 156 (302)
T PRK14650 85 HLNKIEIHD--NQIVAECGTNFEDLCKFALQNEL-----SGLEFIYGLPGTLGGAIWM-NARCFGNEISEILDKITFIDE 156 (302)
T ss_pred CcCcEEEeC--CEEEEEeCCcHHHHHHHHHHcCC-----chhhhhcCCCcchhHHHHh-hCCccccchheeEEEEEEEEC
Confidence 477777653 47999999999999999999984 2444445554444332222 344565 56699999999999
Q ss_pred CCcEEeccCCCCChHHHHhhcCCC-CceEEEEEEEEeeecCc
Q 042619 82 RGRILDREAMGEDLFWAIRGGGGG-SFGIILAWKVKLVPVPA 122 (402)
Q Consensus 82 dG~~~~~~~~~~dLf~a~~G~g~g-~~Gvvt~~~~~~~~~~~ 122 (402)
+|++++.. ..|+-|+.|-..=- .=.||++++|++.|..+
T Consensus 157 ~g~~~~~~--~~e~~f~YR~S~f~~~~~iIl~a~f~L~~~~~ 196 (302)
T PRK14650 157 KGKTICKK--FKKEEFKYKISPFQNKNTFILKATLNLKKGNK 196 (302)
T ss_pred CCCEEEEE--HHHcCcccccccCCCCCEEEEEEEEEEcCCCH
Confidence 99998633 35888888843200 01499999999988643
No 29
>COG0812 MurB UDP-N-acetylmuramate dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=97.72 E-value=0.00011 Score=69.36 Aligned_cols=110 Identities=25% Similarity=0.269 Sum_probs=79.6
Q ss_pred CCCceEEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCccccccc-ccccEeEEEEEcC
Q 042619 3 KLRSIEVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYGL-AADNVVDARIVDA 81 (402)
Q Consensus 3 ~~~~i~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~-~~d~v~~~~vv~~ 81 (402)
+++.++++.+...++|++|+.|.+|.+.+.++|. .|.-.-+||.|.+.|. .=...+.||. ..|.+.++++++.
T Consensus 72 ~~~~~~~~~~~~~i~a~aG~~~~~l~~~~~~~gl-----~GlE~l~gIPGsvGga-v~mNaGAyG~Ei~d~~~~v~~ld~ 145 (291)
T COG0812 72 KLNFIEIEGDDGLIEAGAGAPWHDLVRFALENGL-----SGLEFLAGIPGSVGGA-VIMNAGAYGVEISDVLVSVEVLDR 145 (291)
T ss_pred cccceeeeccCCeEEEccCCcHHHHHHHHHHcCC-----cchhhhcCCCcccchh-hhccCcccccchheeEEEEEEEcC
Confidence 4555667777779999999999999999999874 3455555665554332 2234445554 5699999999999
Q ss_pred CCcEEeccCCCCChHHHHhhcCC-CCceEEEEEEEEeeec
Q 042619 82 RGRILDREAMGEDLFWAIRGGGG-GSFGIILAWKVKLVPV 120 (402)
Q Consensus 82 dG~~~~~~~~~~dLf~a~~G~g~-g~~Gvvt~~~~~~~~~ 120 (402)
+|++.+.. +.||-|+.|-+.= ....||++++|++.|-
T Consensus 146 ~G~~~~l~--~~el~f~YR~S~f~~~~~vvl~v~f~L~~~ 183 (291)
T COG0812 146 DGEVRWLS--AEELGFGYRTSPFKKEYLVVLSVEFKLTKG 183 (291)
T ss_pred CCCEEEEE--HHHhCcccccCcCCCCCEEEEEEEEEeCCC
Confidence 99999733 3588888884320 1128999999999986
No 30
>PRK00046 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=97.61 E-value=7.7e-05 Score=72.43 Aligned_cols=109 Identities=18% Similarity=0.117 Sum_probs=75.4
Q ss_pred CCceEEe-CCC--CEEEEcCCCCHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccc-cccccEeEEEEE
Q 042619 4 LRSIEVD-INN--KTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYG-LAADNVVDARIV 79 (402)
Q Consensus 4 ~~~i~~d-~~~--~~~~v~~G~~~~~l~~~l~~~~~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G-~~~d~v~~~~vv 79 (402)
|+.++++ .+. ..++|++|+.|.+|.+++.++|. .|....+||.|.+.|.-.. +.+.|| -..|.|.+++++
T Consensus 71 ~~~~~~~~~~~~~~~v~a~AG~~~~~l~~~~~~~gl-----~GlE~l~gIPGTVGGAv~m-NaGayG~ei~d~l~~V~v~ 144 (334)
T PRK00046 71 IKGIEVLSEDDDAWYLHVGAGENWHDLVLWTLQQGM-----PGLENLALIPGTVGAAPIQ-NIGAYGVELKDVCDYVEAL 144 (334)
T ss_pred CCceEEEecCCCeEEEEEEcCCcHHHHHHHHHHcCc-----hhhHHhcCCCcchhHHHHh-cCCcCcccHheeEEEEEEE
Confidence 6777763 222 27999999999999999999884 3444445555544332222 345555 466999999999
Q ss_pred cCC-CcEEeccCCCCChHHHHhhcCC-CC---ceEEEEEEEEeeec
Q 042619 80 DAR-GRILDREAMGEDLFWAIRGGGG-GS---FGIILAWKVKLVPV 120 (402)
Q Consensus 80 ~~d-G~~~~~~~~~~dLf~a~~G~g~-g~---~Gvvt~~~~~~~~~ 120 (402)
+.+ |++++-. +.|+.|+.|-..= .. --||++++|++.|-
T Consensus 145 d~~~g~~~~~~--~~e~~f~YR~S~f~~~~~~~~iVl~a~f~L~~~ 188 (334)
T PRK00046 145 DLATGEFVRLS--AAECRFGYRDSIFKHEYPDRYAITAVGFRLPKQ 188 (334)
T ss_pred ECCCCcEEEEE--HHHcCcccccccCCCCCcCCEEEEEEEEEecCC
Confidence 987 9998632 3588888884320 11 13999999999985
No 31
>PRK14651 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=97.26 E-value=0.00047 Score=65.10 Aligned_cols=92 Identities=23% Similarity=0.286 Sum_probs=66.0
Q ss_pred EEcCCCCHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccc-cccccEeEEEEEcCCCcEEeccCCCCCh
Q 042619 17 WVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYG-LAADNVVDARIVDARGRILDREAMGEDL 95 (402)
Q Consensus 17 ~v~~G~~~~~l~~~l~~~~~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G-~~~d~v~~~~vv~~dG~~~~~~~~~~dL 95 (402)
+|++|+.|.+|.+++.++|. .|.-.-+||.|.+.|.-.. ..+.|| -..|.|.++++++ +|++++-. +.|+
T Consensus 75 ~a~AG~~~~~l~~~~~~~gl-----~GlE~l~gIPGTVGGAv~m-NaGayG~ei~d~l~~V~~~~-~g~~~~~~--~~e~ 145 (273)
T PRK14651 75 WVGGGVPLPGLVRRAARLGL-----SGLEGLVGIPAQVGGAVKM-NAGTRFGEMADALHTVEIVH-DGGFHQYS--PDEL 145 (273)
T ss_pred EEECCCcHHHHHHHHHHCCC-----cchhhhcCCCcchhhHHHh-hCCccccChheeEEEEEEEE-CCCEEEEE--HHHc
Confidence 69999999999999999884 2444444444444332222 344455 4669999999997 89998733 3588
Q ss_pred HHHHhhcCCCCc---eEEEEEEEEeeec
Q 042619 96 FWAIRGGGGGSF---GIILAWKVKLVPV 120 (402)
Q Consensus 96 f~a~~G~g~g~~---Gvvt~~~~~~~~~ 120 (402)
.|+.|-. .| -||++++|++.|.
T Consensus 146 ~f~YR~S---~~~~~~iIl~a~f~l~~~ 170 (273)
T PRK14651 146 GFGYRHS---GLPPGHVVTRVRLKLRPS 170 (273)
T ss_pred ccccccc---CCCCCEEEEEEEEEECCC
Confidence 8888843 23 3999999999875
No 32
>PRK14648 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=97.25 E-value=0.00064 Score=66.20 Aligned_cols=111 Identities=25% Similarity=0.322 Sum_probs=74.0
Q ss_pred CCCceEEe---CCCCEEEEcCCCCHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccc-cccccEeEEEE
Q 042619 3 KLRSIEVD---INNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYG-LAADNVVDARI 78 (402)
Q Consensus 3 ~~~~i~~d---~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G-~~~d~v~~~~v 78 (402)
+|+.+++. .....++|++|+.|.+|..++.++|. .|...-+||.|.+.|.-.. +.+.|| -..|.|.++++
T Consensus 81 ~~~~i~i~~~~~~~~~v~agAG~~~~~Lv~~~~~~gl-----~GlE~laGIPGTVGGAv~m-NAGAyG~ei~d~l~~V~v 154 (354)
T PRK14648 81 RFRSLHTQTQRDGSVLVHAGAGLPVAALLAFCAHHAL-----RGLETFAGLPGSVGGAAYM-NARCYGRAIADCFHSART 154 (354)
T ss_pred CcCceEEeeccCCcEEEEEEeCCcHHHHHHHHHHcCC-----cchhhhcCCCcchhhHhhh-cCCccceEhhheEEEEEE
Confidence 46777642 22247999999999999999999884 3555555665555333333 455666 45699999999
Q ss_pred E--------------------cCCCcE-------------EeccCCCCChHHHHhhcCCCC---------ceEEEEEEEE
Q 042619 79 V--------------------DARGRI-------------LDREAMGEDLFWAIRGGGGGS---------FGIILAWKVK 116 (402)
Q Consensus 79 v--------------------~~dG~~-------------~~~~~~~~dLf~a~~G~g~g~---------~Gvvt~~~~~ 116 (402)
+ +.+|++ .+- .+.|+-|+.|-..=-. --||++++|+
T Consensus 155 ~d~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~e~~f~YR~S~f~~~~~~~~~~~~~iIl~v~f~ 232 (354)
T PRK14648 155 LVLHPVRSRAKELPEVRKNAQDKRGECLGLDGGPFTCSSFQTV--FARAGDWGYKRSPFQSPHGVELHAGRRLILSLCVR 232 (354)
T ss_pred EeccCcccccccccccccccccCCCceecccccccccccceEe--cHHHcCccCCcccCCCCccccccCCCEEEEEEEEE
Confidence 9 566776 221 2357778888432000 1299999999
Q ss_pred eeecC
Q 042619 117 LVPVP 121 (402)
Q Consensus 117 ~~~~~ 121 (402)
+.|..
T Consensus 233 L~~~~ 237 (354)
T PRK14648 233 LTPGN 237 (354)
T ss_pred EcCCC
Confidence 99754
No 33
>PRK13904 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=97.17 E-value=0.00081 Score=62.88 Aligned_cols=104 Identities=15% Similarity=0.132 Sum_probs=70.1
Q ss_pred CCCCceEEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccc-cccccEeEEEEEc
Q 042619 2 AKLRSIEVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYG-LAADNVVDARIVD 80 (402)
Q Consensus 2 ~~~~~i~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G-~~~d~v~~~~vv~ 80 (402)
++|+.++++. .+++|++|+.+.+|.+++.++|. .|...-+||.|.+.|.-.. ..+.|| -..|.|.++++++
T Consensus 57 ~~~~~~~~~~--~~v~~~AG~~l~~l~~~~~~~gl-----~GlE~l~gIPGtVGGAv~m-NaGa~g~ei~d~l~~V~~~~ 128 (257)
T PRK13904 57 KNFDYIKIDG--ECLEIGGATKSGKIFNYAKKNNL-----GGFEFLGKLPGTLGGLVKM-NAGLKEYEISNNLESICTNG 128 (257)
T ss_pred cCcCeEEEeC--CEEEEEcCCcHHHHHHHHHHCCC-----chhhhhcCCCccHHHHHHh-cCCcCccchheeEEEEEEEe
Confidence 3577777744 57999999999999999999884 2333334444333222222 234455 4569999999998
Q ss_pred CCCcEEeccCCCCChHHHHhhcCCCCceEEEEEEEEeeecCc
Q 042619 81 ARGRILDREAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPA 122 (402)
Q Consensus 81 ~dG~~~~~~~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~~~ 122 (402)
|+ +. ..|+.|+.|-.. .-.||++++||+.|..+
T Consensus 129 --~~-~~----~~e~~f~YR~S~--~~~iIl~a~f~l~~~~~ 161 (257)
T PRK13904 129 --GW-IE----KEDIGFGYRSSG--INGVILEARFKKTHGFD 161 (257)
T ss_pred --eE-Ee----HHHCcccccCcC--CCcEEEEEEEEECCCCH
Confidence 42 22 358888888432 22599999999998643
No 34
>PF09265 Cytokin-bind: Cytokinin dehydrogenase 1, FAD and cytokinin binding; InterPro: IPR015345 This domain adopts an alpha+beta sandwich structure with an antiparallel beta-sheet, in a ferredoxin-like fold. It is predominantly found in plant cytokinin dehydrogenase 1, where it is capable of binding both FAD and cytokinin substrates. The substrate displays a 'plug-into-socket' binding mode that seals the catalytic site and precisely positions the carbon atom undergoing oxidation in close contact with the reactive locus of the flavin []. ; GO: 0019139 cytokinin dehydrogenase activity, 0050660 flavin adenine dinucleotide binding, 0009690 cytokinin metabolic process, 0055114 oxidation-reduction process; PDB: 2EXR_A 2Q4W_A 3S1E_A 1W1Q_A 2QPM_A 3C0P_A 3BW7_A 3S1C_A 1W1S_A 2QKN_A ....
Probab=95.36 E-value=0.0045 Score=58.47 Aligned_cols=34 Identities=29% Similarity=0.540 Sum_probs=25.2
Q ss_pred ccccccccccccHHHHHHhhhccCCCCCCcCCCCC
Q 042619 363 ASAWGTKYFKDNFNRLVRVKIKVDPDNIFRHEQSI 397 (402)
Q Consensus 363 ~~~w~~~~~g~n~~rL~~iK~kyDP~~lF~~~~~i 397 (402)
.++|.+ -||+.|+|+++.|++|||.+++.-.|.|
T Consensus 247 ~~dW~~-HFG~~W~~f~~~K~~yDP~~IL~PGq~I 280 (281)
T PF09265_consen 247 QEDWRR-HFGPKWERFVERKRRYDPKAILAPGQGI 280 (281)
T ss_dssp HHHHHH-HHGHHHHHHHHHHHHH-TT--B-GGG-S
T ss_pred HHHHHH-HhchHHHHHHHHHHhCCchhhcCCCCCC
Confidence 357975 4699999999999999999999988877
No 35
>PLN00107 FAD-dependent oxidoreductase; Provisional
Probab=90.63 E-value=0.77 Score=42.74 Aligned_cols=27 Identities=30% Similarity=0.576 Sum_probs=22.0
Q ss_pred cccccccccHHHHHHhhhccCCCCCCcCC
Q 042619 366 WGTKYFKDNFNRLVRVKIKVDPDNIFRHE 394 (402)
Q Consensus 366 w~~~~~g~n~~rL~~iK~kyDP~~lF~~~ 394 (402)
..+.| .++++.++||+++||+|+|.+.
T Consensus 171 l~~lY--Pr~~dFlavR~~lDP~G~F~N~ 197 (257)
T PLN00107 171 AIAKY--KKAGEFLKVKERLDPEGLFSSE 197 (257)
T ss_pred HHHHC--cCHHHHHHHHHHhCCCCccCCH
Confidence 34444 6899999999999999999754
No 36
>PF02913 FAD-oxidase_C: FAD linked oxidases, C-terminal domain; InterPro: IPR004113 Some oxygen-dependent oxidoreductases are flavoproteins that contain a covalently bound FAD group which is attached to a histidine via an 8-alpha-(N3-histidyl)-riboflavin linkage. The region around the histidine that binds the FAD group is conserved in these enzymes (see IPR006093 from INTERPRO).; GO: 0003824 catalytic activity, 0050660 flavin adenine dinucleotide binding; PDB: 1WVE_B 1DII_B 1WVF_A 1DIQ_A 2UUU_B 2UUV_A 1W1M_A 1E8H_B 1E0Y_B 1DZN_B ....
Probab=86.53 E-value=0.85 Score=41.77 Aligned_cols=27 Identities=15% Similarity=0.331 Sum_probs=20.3
Q ss_pred cccccccc-cHHHHHHhhhccCCCCCCc
Q 042619 366 WGTKYFKD-NFNRLVRVKIKVDPDNIFR 392 (402)
Q Consensus 366 w~~~~~g~-n~~rL~~iK~kyDP~~lF~ 392 (402)
|-...+|+ .+.-+++||+.+||+|++.
T Consensus 217 ~~~~~~~~~~~~~~~~iK~~~DP~~ilN 244 (248)
T PF02913_consen 217 YLEEEYGPAALRLMRAIKQAFDPNGILN 244 (248)
T ss_dssp HHCHHCHHHHHHHHHHHHHHH-TTS-BS
T ss_pred HHHHhcchHHHHHHHHhhhccCCccCCC
Confidence 44455665 7999999999999999986
No 37
>PF04030 ALO: D-arabinono-1,4-lactone oxidase ; InterPro: IPR007173 This domain is specific to D-arabinono-1,4-lactone oxidase 1.1.3.37 from EC, which is involved in the final step of the D-erythroascorbic acid biosynthesis pathway [].; GO: 0003885 D-arabinono-1,4-lactone oxidase activity, 0055114 oxidation-reduction process, 0016020 membrane; PDB: 2VFU_A 2VFV_A 2VFT_A 2VFS_A 2VFR_A.
Probab=82.45 E-value=1.1 Score=42.04 Aligned_cols=26 Identities=23% Similarity=0.546 Sum_probs=18.4
Q ss_pred cccccccccHHHHHHhhhccCCCCCCcC
Q 042619 366 WGTKYFKDNFNRLVRVKIKVDPDNIFRH 393 (402)
Q Consensus 366 w~~~~~g~n~~rL~~iK~kyDP~~lF~~ 393 (402)
..+.| .++++..++|+++||+|+|..
T Consensus 228 l~~~Y--p~~~~F~~~r~~~DP~g~F~n 253 (259)
T PF04030_consen 228 LRKLY--PRLDDFLAVRKKLDPQGVFLN 253 (259)
T ss_dssp HHHT---TTHHHHHHHHHHH-TT-TT--
T ss_pred HHHHC--cCHHHHHHHHHHhCCCCCCCC
Confidence 44444 789999999999999999965
No 38
>TIGR01677 pln_FAD_oxido plant-specific FAD-dependent oxidoreductase. This model represents an uncharacterized plant-specific family of FAD-dependent oxidoreductases. At least seven distinct members are found in Arabidopsis thaliana. The family shows considerable sequence similarity to three different enzymes of ascorbic acid biosynthesis: L-galactono-1,4-lactone dehydrogenase (EC 1.3.2.3) from higher plants, D-arabinono-1,4-lactone oxidase (EC 1.1.3.37 from Saccharomyces cerevisiae, and L-gulonolactone oxidase (EC 1.1.3.8) from mouse, as well as to a bacterial sorbitol oxidase. The class of compound acted on by members of this family is unknown.
Probab=76.91 E-value=3.5 Score=43.25 Aligned_cols=27 Identities=33% Similarity=0.543 Sum_probs=22.4
Q ss_pred cccccccccHHHHHHhhhccCCCCCCcCC
Q 042619 366 WGTKYFKDNFNRLVRVKIKVDPDNIFRHE 394 (402)
Q Consensus 366 w~~~~~g~n~~rL~~iK~kyDP~~lF~~~ 394 (402)
..+.| .++++.++||+++||+++|..+
T Consensus 477 l~~~Y--P~~~dF~alR~~~DP~g~F~N~ 503 (557)
T TIGR01677 477 VIRKY--PNADKFLKVKDSYDPKGLFSSE 503 (557)
T ss_pred HHHhC--CCHHHHHHHHHhcCCCCccCCH
Confidence 44555 5899999999999999999754
No 39
>TIGR00387 glcD glycolate oxidase, subunit GlcD. This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity.
Probab=72.10 E-value=3.2 Score=41.91 Aligned_cols=28 Identities=25% Similarity=0.466 Sum_probs=23.2
Q ss_pred cccccccc-ccHHHHHHhhhccCCCCCCc
Q 042619 365 AWGTKYFK-DNFNRLVRVKIKVDPDNIFR 392 (402)
Q Consensus 365 ~w~~~~~g-~n~~rL~~iK~kyDP~~lF~ 392 (402)
.|....|| ..++-|++||+.+||+|++.
T Consensus 382 ~~~~~~~~~~~~~~~~~iK~~fDP~~ilN 410 (413)
T TIGR00387 382 EFMPYKFNEKELETMRAIKKAFDPDNILN 410 (413)
T ss_pred HHHHHhcCHHHHHHHHHHHHHcCcCcCCC
Confidence 35556666 57999999999999999985
No 40
>PLN02805 D-lactate dehydrogenase [cytochrome]
Probab=66.04 E-value=8.8 Score=40.33 Aligned_cols=34 Identities=26% Similarity=0.493 Sum_probs=27.5
Q ss_pred cccccccc-ccHHHHHHhhhccCCCCCCcCCCCCC
Q 042619 365 AWGTKYFK-DNFNRLVRVKIKVDPDNIFRHEQSIP 398 (402)
Q Consensus 365 ~w~~~~~g-~n~~rL~~iK~kyDP~~lF~~~~~i~ 398 (402)
.|-..+|| +.++-+++||+.+||+|++.-..-++
T Consensus 516 ~~l~~~~g~~~~~lm~~IK~a~DP~gILNPGKi~~ 550 (555)
T PLN02805 516 KYLEKELGIEALQTMKRIKKALDPNNIMNPGKLIP 550 (555)
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCcCcCCCCCceeC
Confidence 57777777 57999999999999999997655443
No 41
>PRK11230 glycolate oxidase subunit GlcD; Provisional
Probab=64.87 E-value=7.5 Score=40.32 Aligned_cols=31 Identities=23% Similarity=0.330 Sum_probs=24.4
Q ss_pred cccccccc-ccHHHHHHhhhccCCCCCCcCCC
Q 042619 365 AWGTKYFK-DNFNRLVRVKIKVDPDNIFRHEQ 395 (402)
Q Consensus 365 ~w~~~~~g-~n~~rL~~iK~kyDP~~lF~~~~ 395 (402)
.|-...|| +.++-+++||+.+||+|++.-..
T Consensus 439 ~~l~~~~g~~~~~~m~~IK~~fDP~~iLNPGk 470 (499)
T PRK11230 439 NQMCAQFNSDEITLFHAVKAAFDPDGLLNPGK 470 (499)
T ss_pred HHHHHhcCHHHHHHHHHHHHHcCCCcCCCCCe
Confidence 35555566 67999999999999999986443
No 42
>TIGR01679 bact_FAD_ox FAD-linked oxidoreductase. This model represents a family of bacterial oxidoreductases with covalently linked FAD, closely related to two different eukaryotic oxidases, L-gulonolactone oxidase (EC 1.1.3.8) from rat and D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) from Saccharomyces cerevisiae.
Probab=64.21 E-value=3.2 Score=42.02 Aligned_cols=22 Identities=23% Similarity=0.465 Sum_probs=19.9
Q ss_pred cHHHHHHhhhccCCCCCCcCCC
Q 042619 374 NFNRLVRVKIKVDPDNIFRHEQ 395 (402)
Q Consensus 374 n~~rL~~iK~kyDP~~lF~~~~ 395 (402)
++++.++||+++||+++|...+
T Consensus 392 ~~~~F~~~r~~~DP~g~F~n~~ 413 (419)
T TIGR01679 392 RWDDFAAVRDDLDPDRRFLNPY 413 (419)
T ss_pred CHHHHHHHHHHhCCCCccCCHH
Confidence 7999999999999999998654
No 43
>KOG4730 consensus D-arabinono-1, 4-lactone oxidase [Defense mechanisms]
Probab=52.13 E-value=7.5 Score=39.13 Aligned_cols=20 Identities=25% Similarity=0.791 Sum_probs=18.8
Q ss_pred ccHHHHHHhhhccCCCCCCc
Q 042619 373 DNFNRLVRVKIKVDPDNIFR 392 (402)
Q Consensus 373 ~n~~rL~~iK~kyDP~~lF~ 392 (402)
.|.++..++|+++||.++|.
T Consensus 485 ~n~~~flkvr~~lDP~~lFs 504 (518)
T KOG4730|consen 485 KNLDKFLKVRKELDPKGLFS 504 (518)
T ss_pred cChHHHHHHHHhcCccchhh
Confidence 69999999999999999993
No 44
>PRK11282 glcE glycolate oxidase FAD binding subunit; Provisional
Probab=50.58 E-value=9.4 Score=37.66 Aligned_cols=21 Identities=29% Similarity=0.404 Sum_probs=18.1
Q ss_pred ccc-HHHHHHhhhccCCCCCCc
Q 042619 372 KDN-FNRLVRVKIKVDPDNIFR 392 (402)
Q Consensus 372 g~n-~~rL~~iK~kyDP~~lF~ 392 (402)
..+ .+-+++||+++||.++|.
T Consensus 323 ~~~~~~l~~~lK~~fDP~~iln 344 (352)
T PRK11282 323 PAPLLRIHRRLKQAFDPAGIFN 344 (352)
T ss_pred CHHHHHHHHHHHHhcCcccCCC
Confidence 344 788999999999999995
No 45
>KOG4656 consensus Copper chaperone for superoxide dismutase [Inorganic ion transport and metabolism]
Probab=32.13 E-value=68 Score=28.97 Aligned_cols=41 Identities=17% Similarity=0.273 Sum_probs=34.1
Q ss_pred CCCceEEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeeccCC
Q 042619 3 KLRSIEVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGL 44 (402)
Q Consensus 3 ~~~~i~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~g~ 44 (402)
..++++||-+.+.+.|+.-+.+.++...|...|.. ++.-|.
T Consensus 33 Gi~~vevdle~q~v~v~ts~p~s~i~~~le~tGr~-Avl~G~ 73 (247)
T KOG4656|consen 33 GINSVEVDLEQQIVSVETSVPPSEIQNTLENTGRD-AVLRGA 73 (247)
T ss_pred CcceEEEEhhhcEEEEEccCChHHHHHHHHhhChh-eEEecC
Confidence 45788999999999999999999999999988854 444443
No 46
>TIGR01676 GLDHase galactonolactone dehydrogenase. This model represents L-Galactono-gamma-lactone dehydrogenase (EC 1.3.2.3). This enzyme catalyzes the final step in ascorbic acid biosynthesis in higher plants. This protein is homologous to ascorbic acid biosynthesis enzymes of other species: L-gulono-gamma-lactone oxidase in rat and L-galactono-gamma-lactone oxidase in yeast. All three covalently bind the cofactor FAD.
Probab=27.22 E-value=35 Score=35.74 Aligned_cols=26 Identities=15% Similarity=0.404 Sum_probs=20.9
Q ss_pred cccccccccHHHHHHhhhccCCCCCCcCC
Q 042619 366 WGTKYFKDNFNRLVRVKIKVDPDNIFRHE 394 (402)
Q Consensus 366 w~~~~~g~n~~rL~~iK~kyDP~~lF~~~ 394 (402)
|.+.| + +++.++|++++||+++|.+.
T Consensus 509 l~~~Y-P--~d~F~~~R~~lDP~g~F~N~ 534 (541)
T TIGR01676 509 LKKKF-P--VDASNKARKALDPNKILSNN 534 (541)
T ss_pred HHhhC-C--HHHHHHHHHHhCCCCccccH
Confidence 55544 4 78889999999999999754
No 47
>PLN02465 L-galactono-1,4-lactone dehydrogenase
Probab=26.27 E-value=37 Score=35.84 Aligned_cols=28 Identities=11% Similarity=0.408 Sum_probs=23.0
Q ss_pred cccccccccccHHHHHHhhhccCCCCCCcCC
Q 042619 364 SAWGTKYFKDNFNRLVRVKIKVDPDNIFRHE 394 (402)
Q Consensus 364 ~~w~~~~~g~n~~rL~~iK~kyDP~~lF~~~ 394 (402)
+++.+.| + +++.+++++++||+++|.+.
T Consensus 537 ~~L~~~Y-P--~d~F~~~R~~lDP~g~f~N~ 564 (573)
T PLN02465 537 ERLRKRF-P--VDAFNKARKELDPKGILSNN 564 (573)
T ss_pred HHHHhhC-C--HHHHHHHHHHhCCCCccCCH
Confidence 3566665 5 99999999999999999654
No 48
>PF02762 Cbl_N3: CBL proto-oncogene N-terminus, SH2-like domain; InterPro: IPR014742 Cbl (Casitas B-lineage lymphoma) is an adaptor protein that functions as a negative regulator of many signalling pathways that start from receptors at the cell surface. The N-terminal region of Cbl contains a Cbl-type phosphotyrosine-binding (Cbl-PTB) domain, which is composed of three evolutionarily conserved domains: an N-terminal four-helix bundle (4H) domain, an EF hand-like calcium-binding domain, and a divergent SH2-like domain. The calcium-bound EF-hand wedges between the 4H and SH2 domains, and roughly determines their relative orientation. The Cbl-PTB domain has also been named Cbl N-terminal (Cbl-N) or tyrosine kinase binding (TKB) domain [, ]. The N-terminal 4H domain contains four long alpha-helices. The C and D helices in this domain pack against the adjacent EF-hand-like domain, and a highly conserved loop connecting the A and B helices contacts the SH2-like domain. The EF-hand motif is similar to classical EF-hand proteins. The SH2-like domain retains the general helix-sheet-helix architecture of the SH2 fold, but lacks the secondary beta-sheet, comprising beta-strands D', E and F, and also a prominent BG loop []. This entry represents the SH2-like domain.; PDB: 3PFV_A 3VGO_A 3PLF_B 2Y1M_A 2CBL_A 3BUX_B 3BUN_B 3BUM_B 3OB1_B 3BUW_B ....
Probab=25.99 E-value=86 Score=23.59 Aligned_cols=28 Identities=25% Similarity=0.391 Sum_probs=20.0
Q ss_pred EEEEEcCCCcEEeccCCCCChHHHHhhc
Q 042619 75 DARIVDARGRILDREAMGEDLFWAIRGG 102 (402)
Q Consensus 75 ~~~vv~~dG~~~~~~~~~~dLf~a~~G~ 102 (402)
++--|+.||+|++.-.+|..|+-|+.-|
T Consensus 41 AIGyV~~dg~I~QTIPqnk~L~qaLidG 68 (86)
T PF02762_consen 41 AIGYVTQDGKILQTIPQNKSLYQALIDG 68 (86)
T ss_dssp EEEEEETTSEEEEE--SSS-HHHHHHHH
T ss_pred eEEEEcCCCcEEEecCCCchHHHHHHhc
Confidence 4567999999998666788999988744
No 49
>COG1570 XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair]
Probab=24.98 E-value=49 Score=33.51 Aligned_cols=30 Identities=17% Similarity=0.437 Sum_probs=25.5
Q ss_pred cccHHHHHHhhhccCCCCCC--cCCCCCCCCC
Q 042619 372 KDNFNRLVRVKIKVDPDNIF--RHEQSIPPVP 401 (402)
Q Consensus 372 g~n~~rL~~iK~kyDP~~lF--~~~~~i~~~~ 401 (402)
|.-|.++.++|+|..-+|+| .+.++||..|
T Consensus 104 G~L~~~~E~lK~kL~aEGlFd~~~KkpLP~~p 135 (440)
T COG1570 104 GALYLAFEQLKAKLAAEGLFDPERKKPLPFFP 135 (440)
T ss_pred hHHHHHHHHHHHHHHhCCCcChhhcCCCCCCC
Confidence 78899999999999999999 4667777554
No 50
>PF03392 OS-D: Insect pheromone-binding family, A10/OS-D; InterPro: IPR005055 A class of small (14-20 Kd) water-soluble proteins, called odorant binding proteins (OBPs), first discovered in the insect sensillar lymph but also in the mucus of vertebrates, is postulated to mediate the solubilisation of hydrophobic odorant molecules, and thereby to facilitate their transport to the receptor neurons. The product of a gene expressed in the olfactory system of Drosophila melanogaster (Fruit fly), OS-D, shares features common to vertebrate odorant-binding proteins, but has a primary structure unlike odorant-binding proteins []. OS-D derivatives have subsequently been found in chemosensory organs of phylogenetically distinct insects, including cockroaches, phasmids and moths, suggesting that OS-D-like proteins seem to be conserved in the insect phylum.; PDB: 1KX9_A 1N8U_A 1KX8_A 1K19_A 1N8V_A 2GVS_A 2JNT_A.
Probab=21.81 E-value=52 Score=25.88 Aligned_cols=14 Identities=29% Similarity=0.517 Sum_probs=10.3
Q ss_pred HHhhhccCCCCCCc
Q 042619 379 VRVKIKVDPDNIFR 392 (402)
Q Consensus 379 ~~iK~kyDP~~lF~ 392 (402)
.+|.+||||+|-+.
T Consensus 79 ~~l~~KyDp~~~y~ 92 (95)
T PF03392_consen 79 EELVKKYDPEGKYR 92 (95)
T ss_dssp HHHHHHHTTT-TTH
T ss_pred HHHHHHHCCCcchh
Confidence 56889999998763
No 51
>PF12108 SF3a60_bindingd: Splicing factor SF3a60 binding domain; InterPro: IPR021966 This domain is found in eukaryotes. This domain is about 30 amino acids in length. This domain has a single completely conserved residue Y that may be functionally important. SF3a60 makes up the SF3a complex with SF3a66 and SF3a120. This domain is the binding site of SF3a60 for SF3a120. The SF3a complex is part of the spliceosome, a protein complex involved in splicing mRNA after transcription. ; PDB: 2DT7_A.
Probab=20.63 E-value=46 Score=19.90 Aligned_cols=12 Identities=25% Similarity=0.404 Sum_probs=9.8
Q ss_pred ccHHHHHHhhhc
Q 042619 373 DNFNRLVRVKIK 384 (402)
Q Consensus 373 ~n~~rL~~iK~k 384 (402)
+=|+||++||.-
T Consensus 11 eFY~rlk~Ike~ 22 (28)
T PF12108_consen 11 EFYERLKEIKEY 22 (28)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 559999999964
Done!