Query 042619
Match_columns 402
No_of_seqs 162 out of 1663
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 13:44:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042619.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042619hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vte_A Tetrahydrocannabinolic 100.0 6.5E-71 2.2E-75 562.1 38.5 399 1-401 105-514 (518)
2 3fw9_A Reticuline oxidase; BI- 100.0 7.7E-69 2.6E-73 545.6 37.0 392 1-401 97-495 (495)
3 3tsh_A Pollen allergen PHL P 4 100.0 7.8E-65 2.7E-69 519.9 34.2 389 1-401 106-497 (500)
4 3rja_A Carbohydrate oxidase; p 100.0 6.4E-60 2.2E-64 478.9 31.9 369 1-400 88-472 (473)
5 3pop_A GILR oxidase; FAD bindi 100.0 2.6E-58 8.8E-63 469.3 28.9 373 1-399 85-501 (501)
6 2y3s_A TAML; oxidoreductase; H 100.0 2.7E-54 9.2E-59 443.1 34.9 374 1-401 109-529 (530)
7 2wdx_A Putative hexose oxidase 100.0 1.2E-54 4E-59 445.4 32.1 371 1-399 108-523 (523)
8 1zr6_A Glucooligosaccharide ox 100.0 2.3E-54 7.9E-59 441.8 32.9 367 1-400 94-479 (503)
9 2ipi_A Aclacinomycin oxidoredu 100.0 1.6E-53 5.3E-58 437.2 35.3 371 1-400 106-520 (521)
10 2bvf_A 6-hydroxy-D-nicotine ox 100.0 7.8E-52 2.7E-56 419.4 28.2 361 1-399 88-456 (459)
11 1w1o_A Cytokinin dehydrogenase 100.0 3.9E-30 1.3E-34 264.9 27.0 138 1-141 121-266 (534)
12 2exr_A Cytokinin dehydrogenase 99.9 1.1E-24 3.6E-29 223.5 27.7 142 1-145 112-263 (524)
13 3pm9_A Putative oxidoreductase 99.9 5E-24 1.7E-28 215.7 21.0 145 1-146 102-253 (476)
14 4bby_A Alkyldihydroxyacetoneph 99.9 6.6E-24 2.3E-28 223.1 15.1 144 1-145 260-409 (658)
15 2uuu_A Alkyldihydroxyacetoneph 99.9 2.6E-22 8.9E-27 207.6 13.9 142 1-145 191-339 (584)
16 4feh_A Oxidoreductase DPRE1; a 99.9 1E-21 3.4E-26 198.9 15.4 140 1-146 94-238 (481)
17 2yvs_A Glycolate oxidase subun 99.9 2.4E-21 8.2E-26 176.1 12.9 116 7-130 1-124 (219)
18 1wvf_A 4-cresol dehydrogenase 99.8 1.2E-20 3.9E-25 193.7 17.5 144 1-148 109-268 (520)
19 2vfr_A Xylitol oxidase, aldito 99.8 1.7E-20 5.8E-25 187.7 13.7 120 1-126 67-189 (422)
20 1e8g_A Vanillyl-alcohol oxidas 99.8 1.3E-19 4.4E-24 187.3 17.1 146 1-148 124-300 (560)
21 1f0x_A DLDH, D-lactate dehydro 99.8 4.3E-19 1.5E-23 182.6 7.2 142 1-145 101-297 (571)
22 2i0k_A Oxidoreductase; MIX alp 99.8 3E-18 1E-22 176.9 12.5 120 2-126 92-227 (561)
23 3js8_A Cholesterol oxidase; ch 99.7 3.6E-18 1.2E-22 173.3 12.2 117 3-124 87-221 (540)
24 3tx1_A UDP-N-acetylenolpyruvoy 99.5 9.6E-14 3.3E-18 133.1 8.9 111 1-122 104-217 (322)
25 1hsk_A UDP-N-acetylenolpyruvoy 99.4 7.2E-14 2.5E-18 134.6 6.1 107 1-120 98-209 (326)
26 3i99_A UDP-N-acetylenolpyruvoy 99.4 2.5E-13 8.7E-18 131.6 8.7 111 4-122 81-199 (357)
27 1uxy_A MURB, uridine diphospho 99.3 2.2E-12 7.6E-17 124.5 10.0 111 4-122 65-183 (340)
28 2gqt_A UDP-N-acetylenolpyruvyl 99.3 1.1E-12 3.8E-17 122.4 3.0 107 1-121 66-173 (268)
29 2vfr_A Xylitol oxidase, aldito 91.4 0.098 3.4E-06 51.5 3.2 59 317-394 355-414 (422)
30 1ffv_C CUTM, flavoprotein of c 88.5 0.37 1.3E-05 44.8 4.4 105 3-122 59-179 (287)
31 1wvf_A 4-cresol dehydrogenase 86.5 0.64 2.2E-05 46.9 5.1 31 366-396 481-512 (520)
32 4bby_A Alkyldihydroxyacetoneph 82.6 1.8 6E-05 45.1 6.4 29 365-393 625-654 (658)
33 1e8g_A Vanillyl-alcohol oxidas 66.5 5.9 0.0002 40.2 5.2 23 373-395 523-545 (560)
34 2i0k_A Oxidoreductase; MIX alp 51.5 5.9 0.0002 40.2 2.0 22 373-394 533-554 (561)
35 4feh_A Oxidoreductase DPRE1; a 50.1 5.2 0.00018 39.8 1.4 28 365-394 446-473 (481)
36 1n62_C Carbon monoxide dehydro 49.4 6.9 0.00023 36.1 2.0 103 4-121 60-178 (288)
37 2uuu_A Alkyldihydroxyacetoneph 48.5 21 0.00072 36.3 5.7 29 365-393 551-580 (584)
38 1f0x_A DLDH, D-lactate dehydro 47.2 9 0.00031 39.0 2.6 27 372-399 536-562 (571)
39 3js8_A Cholesterol oxidase; ch 40.7 11 0.00039 37.9 2.1 23 372-394 511-533 (540)
40 2crl_A Copper chaperone for su 38.8 72 0.0025 23.5 6.1 34 5-38 47-80 (98)
41 2w3s_A Xanthine dehydrogenase; 34.7 22 0.00075 35.1 3.1 105 4-120 231-346 (462)
42 2gvs_A Chemosensory protein CS 22.6 28 0.00094 27.0 1.1 14 379-392 84-97 (109)
43 1k19_A Chemosensory protein CS 20.9 32 0.0011 26.8 1.1 14 379-392 82-95 (112)
No 1
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=100.00 E-value=6.5e-71 Score=562.14 Aligned_cols=399 Identities=49% Similarity=0.943 Sum_probs=336.5
Q ss_pred CCCCCceEEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccccccccEeEEEEEc
Q 042619 1 LAKLRSIEVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARIVD 80 (402)
Q Consensus 1 l~~~~~i~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~vv~ 80 (402)
|++||+|++|++.++|+||||+++++|+++|.++|.++.+++|.|++|||||+++|||+|.++++||+.+|+|++++||+
T Consensus 105 l~~l~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgvgG~~~gGg~G~~s~~~G~~~D~V~~~evV~ 184 (518)
T 3vte_A 105 LRNMHSIKIDVHSQTAWVEAGATLGEVYYWINEKNENLSFPGGYCPTVGVGGHFSGGGYGALMRNYGLAADNIIDAHLVN 184 (518)
T ss_dssp CTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCTTEECCCCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEEC
T ss_pred CCCCceeEEeCCCCEEEEeCCccHHHHHHHHHHhCCCceecCCCCCCeeeeeeeCCCCCccccCCCCchhheEEEEEEEc
Confidence 68899999999999999999999999999999987778899999999999999999999999999999999999999999
Q ss_pred CCCcEEeccCCCCChHHHHhhcCCCCceEEEEEEEEeeecCceEEEEEEEecch-hhHHHHHHHHHHHHhhccccceeeE
Q 042619 81 ARGRILDREAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTLE-QGATKILYKWQQVADKLDEDLFIRV 159 (402)
Q Consensus 81 ~dG~~~~~~~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (402)
+||++++.+.+|+|||||+||||+|+|||||+++||++|.|+.+..+.+.+... +++.+++..|+++++++|+++++.+
T Consensus 185 adG~iv~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~l~~~~ 264 (518)
T 3vte_A 185 VDGKVLDRKSMGEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIFSVKKNMEIHGLVKLFNKWQNIAYKYDKDLVLMT 264 (518)
T ss_dssp TTCCEECHHHHCHHHHHHHTTSCGGGTCEEEEEEEECEECCSCEEEEEEEECCCHHHHHHHHHHHHHHGGGSCTTEEEEE
T ss_pred cCCeEEEeeccccchhhheecccCCCceEEEEEEEEEEeCCCeEEEEEEEecCCHHHHHHHHHHHHHHHHcCCHhHeEEE
Confidence 999999754468999999999855899999999999999999877777777543 5678899999999999999999888
Q ss_pred EEeeccCC---CCCCceeEEEEEEEEecChHHHHHHHhhhccCCCCCcCcccccchHHHHHHhhccCCC-Cc---hhhhh
Q 042619 160 IIKLANAG---PKGKRTVTTSYNALFLGDSERLLQVMHMWFPELGLTRNDCIETSWIRSVLYIADFQNN-TE---PEILL 232 (402)
Q Consensus 160 ~~~~~~~~---~~~~~~~~i~~~~~~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~ 232 (402)
.+...++. +.+...+.+.+.++|+|+.+++.+.|.+.+++++....++.+++|++++.+++.++.+ .+ .+.++
T Consensus 265 ~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~l~ 344 (518)
T 3vte_A 265 HFITKNITDNHGKNKTTVHGYFSSIFHGGVDSLVDLMNKSFPELGIKKTDCKEFSWIDTTIFYSGVVNFNTANFKKEILL 344 (518)
T ss_dssp EEEEESCC-------CEEEEEEEEEEESCHHHHHHHHHHHCGGGCCCGGGEEEECHHHHHHHTSSSCCC-----CGGGGG
T ss_pred EEcccCCCCCCCcCCCceEEEEEEEEeCCHHHHhhhhhhhhhhcCCCccceeecchhhhhhhhhcCCccCCccchhhhhc
Confidence 87753321 1111235678889999999999999988788887766778889999988887755543 33 44455
Q ss_pred hhhhcccccccccccccCCCCCHHHHHHHHHHHhcC--CCcEEEEeeCCCCCCCCCCCCCCCccccCceEEEEEEEEeCC
Q 042619 233 EAEFLFKNYFKAKSDFVKEPIPESVLEGLWKMLLEE--DNPVMIWNPYGGMMSKISEYEIPFPHRKGNIFKIQYLTLWKD 310 (402)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~Gg~~~~~~~~~ta~~~R~~~~~~~~~~~~w~~ 310 (402)
++....+.+|+.|+.++.++++++.++.+++.+.+. +.+.+.+.++||++++++.++||||||+...|.+++.+.|.+
T Consensus 345 ~~~~~~~~~~k~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~v~~~~~GGa~~~v~~~~TAf~hR~~~~~~~~~~~~w~~ 424 (518)
T 3vte_A 345 DRSAGKKTAFSIKLDYVKKPIPETAMVKILEKLYEEDVGAGMYVLYPYGGIMEEISESAIPFPHRAGIMYELWYTASWEK 424 (518)
T ss_dssp CTTCSCCBEEEEEEEEESSCCCHHHHHHHHHGGGGSCTTTEEEEEEECCGGGGTSCTTSSSCCCCTTCCEEEEEEEEECC
T ss_pred cCCcCcccceeeechhcccCCCHHHHHHHHHHHHhCCCCCeEEEEeecCccccCCCCCCCcccccCcceEEEEEEEecCC
Confidence 554444557788999998889999999999988763 346789999999999999999999999844899999999976
Q ss_pred CCccchhhHHHHHHHHHHhccccccCCCCceeccccCCccC-CCCCCCcchhcccccccccccccHHHHHHhhhccCCCC
Q 042619 311 GDQKNATKHNGWIRRLYDYMAPYASIFPRAAYVNYRDLDLG-LNKKFNTSYTEASAWGTKYFKDNFNRLVRVKIKVDPDN 389 (402)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~Y~N~~d~~~~-~~~~~~~~~~~~~~w~~~~~g~n~~rL~~iK~kyDP~~ 389 (402)
+. .+++..+|++++++.|.|+.+..+.|+|+||.|.+++ .+...+++|..++.|++.|||+||+||++||+||||+|
T Consensus 425 ~~--~~~~~~~w~~~~~~~~~p~~~~~~~g~YvNy~D~dl~~~~~~~~~~~~~~~~w~~~Yyg~N~~RL~~vK~~yDP~n 502 (518)
T 3vte_A 425 QE--DNEKHINWVRSVYNFTTPYVSQNPRLAYLNYRDLDLGKTNHASPNNYTQARIWGEKYFGKNFNRLVKVKTKVDPNN 502 (518)
T ss_dssp TT--THHHHHHHHHHHHHHTGGGSCCTTCCCCTTSCCGGGCCCCTTSCCCHHHHHHHHHHHSSTHHHHHHHHHHHHCTTC
T ss_pred cc--hhHHHHHHHHHHHHHhccccCCCCccccccCCCccccccccccccchhhhhhHHHHHhHhHHHHHHHHHhhcCchh
Confidence 53 4578899999999999999765668999999998865 21112344555668999999999999999999999999
Q ss_pred CCcCCCCCCCCC
Q 042619 390 IFRHEQSIPPVP 401 (402)
Q Consensus 390 lF~~~~~i~~~~ 401 (402)
||+++|+|+|.+
T Consensus 503 ~F~~~QsI~p~~ 514 (518)
T 3vte_A 503 FFRNEQSIPPLP 514 (518)
T ss_dssp CSCCTTCCCCCC
T ss_pred cccCCCCCCCCC
Confidence 999999999874
No 2
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=100.00 E-value=7.7e-69 Score=545.55 Aligned_cols=392 Identities=46% Similarity=0.840 Sum_probs=330.9
Q ss_pred CCCCCceEEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccccccccEeEEEEEc
Q 042619 1 LAKLRSIEVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARIVD 80 (402)
Q Consensus 1 l~~~~~i~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~vv~ 80 (402)
|++||+|++|+++++++||||+++++|+++|.+++.++.+++|.|++|||||+++|||+|..+++||+.+|+|++++||+
T Consensus 97 l~~m~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgigG~~~gGg~G~~~~~~G~~~D~v~~~~vV~ 176 (495)
T 3fw9_A 97 LMNLNRVSIDLESETAWVESGSTLGELYYAITESSSKLGFTAGWCPTVGTGGHISGGGFGMMSRKYGLAADNVVDAILID 176 (495)
T ss_dssp CTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCSSEECCCCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEEC
T ss_pred CCCCCcEEEeCCCCEEEEcCCCCHHHHHHHHHHhcCCceeccCCCCCCeEeeeccCCCCcccccCCCchhheEEEEEEEc
Confidence 67899999999999999999999999999999996668899999999999999999999999999999999999999999
Q ss_pred CCCcEEeccCCCCChHHHHhhcCCCCceEEEEEEEEeeecCceEEEEEEEecch-hhHHHHHHHHHHHHhhccccceeeE
Q 042619 81 ARGRILDREAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTLE-QGATKILYKWQQVADKLDEDLFIRV 159 (402)
Q Consensus 81 ~dG~~~~~~~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (402)
+||++++++.+++|||||+|||++|+|||||+++||++|.|+.+..+.+.+... +++.+++..|+++++++|+++++.+
T Consensus 177 adG~i~~~~~~~~DLf~a~rGg~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~l~~~~ 256 (495)
T 3fw9_A 177 ANGAILDRQAMGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEATSLLHKWQFVAEELEEDFTLSV 256 (495)
T ss_dssp TTCCEECHHHHCHHHHHHHTTSCTTSSCEEEEEEEECEECCSSEEEEEEEEEECHHHHHHHHHHHHHHHHHSCTTEEEEE
T ss_pred CCCCEEEcCCCChhhhhhhhcccCCCcEEEEEEEEEEEeCCCeEEEEEEeecCcHHHHHHHHHHHHHHHhcCChhHeEEE
Confidence 999999855568999999999666899999999999999999887777777653 6678899999999999999998776
Q ss_pred EEeeccCCCCCCceeEEEEEEEEecChHHHHHHHhhhccCCCCCcCcccccchHHHHHHhhccCCCCchhhhhhhhhc-c
Q 042619 160 IIKLANAGPKGKRTVTTSYNALFLGDSERLLQVMHMWFPELGLTRNDCIETSWIRSVLYIADFQNNTEPEILLEAEFL-F 238 (402)
Q Consensus 160 ~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 238 (402)
.... . .....+.+.++|+|+.+++.+.|.+.++++++...++.+++|+++..+++.++. .+.++++... +
T Consensus 257 ~~~~----~--~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~~ 327 (495)
T 3fw9_A 257 LGGA----D--EKQVWLTMLGFHFGLKTVAKSTFDLLFPELGLVEEDYLEMSWGESFAYLAGLET---VSQLNNRFLKFD 327 (495)
T ss_dssp EEEE----E--TTEEEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHHHHTTCSC---GGGGGCTTSCSC
T ss_pred EEcC----C--CCceEEEEEEEEeCCHHHHHHHHHHhhhhcCCCccceEEcCHHHHHHHHhcccc---hhhhcCCCCCcc
Confidence 6431 1 123457788999999999999888878888776677889999998877654332 2334443322 3
Q ss_pred cccccccccccCCCCCHHHHHHHHHHHhcCCCcEEEEeeCCCCCCCCCCCCCCCccccCceEEEEEEEEeCCCCccchhh
Q 042619 239 KNYFKAKSDFVKEPIPESVLEGLWKMLLEEDNPVMIWNPYGGMMSKISEYEIPFPHRKGNIFKIQYLTLWKDGDQKNATK 318 (402)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~Gg~~~~~~~~~ta~~~R~~~~~~~~~~~~w~~~~~~~~~~ 318 (402)
+.+|+.|+.++.++++++.++.+++.+.+.+...+.+.++||++++++.++|||+||+...|.+++...|.++.++.+++
T Consensus 328 ~~~~~~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~~~~~GGa~~~v~~~~TAf~hR~~~~~~~~~~~~w~~~~~~~~~~ 407 (495)
T 3fw9_A 328 ERAFKTKVDLTKEPLPSKAFYGLLERLSKEPNGFIALNGFGGQMSKISSDFTPFPHRSGTRLMVEYIVAWNQSEQKKKTE 407 (495)
T ss_dssp CCEEEEEEEECSSCCCHHHHHHHHHHHHHCTTEEEEEEECCGGGGTSCTTTSSCCCCTTCCEEEEEEEEECGGGGGGHHH
T ss_pred CcceeEeehhhcCCCCHHHHHHHHHHHhhCCCcEEEecccCCccccCCCCCCCccccCccceEEEEEEecCCCCcchhHH
Confidence 45788899999888999999999999887777788999999999999999999999985589999999997653345677
Q ss_pred HHHHHHHHHHhccccccCCCCceeccccCCccCCCCC-----CCcchhcccccccccccccHHHHHHhhhccCCCCCCcC
Q 042619 319 HNGWIRRLYDYMAPYASIFPRAAYVNYRDLDLGLNKK-----FNTSYTEASAWGTKYFKDNFNRLVRVKIKVDPDNIFRH 393 (402)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~g~Y~N~~d~~~~~~~~-----~~~~~~~~~~w~~~~~g~n~~rL~~iK~kyDP~~lF~~ 393 (402)
..+|++++++.|.|+.+..++++|+||.|.+++.++. ++++|...+.|++.|||+||+||++||+||||+|||++
T Consensus 408 ~~~w~~~~~~~~~p~~~~~~~~~Y~Ny~d~dl~~~~~~~~~~~~~~~~~~~~w~~~Yyg~n~~RL~~vK~~yDP~n~F~~ 487 (495)
T 3fw9_A 408 FLDWLEKVYEFMKPFVSKNPRLGYVNHIDLDLGGIDWGNKTVVNNAIEISRSWGESYFLSNYERLIRAKTLIDPNNVFNH 487 (495)
T ss_dssp HHHHHHHHHHHHGGGSCCSSCCCCGGGCCGGGCCCCTTCHHHHHTHHHHHHHHHHHHHGGGHHHHHHHHHHHCTTCCSCC
T ss_pred HHHHHHHHHHHHhhhccCCCcccccCccCccccccccccccccccccchhhhhHHHHhHhHHHHHHHHHHhhCcHhhCCC
Confidence 8899999999999997656678999999988652110 01334445679999999999999999999999999999
Q ss_pred CCCCCCCC
Q 042619 394 EQSIPPVP 401 (402)
Q Consensus 394 ~~~i~~~~ 401 (402)
+|+|+|.+
T Consensus 488 ~qsI~p~~ 495 (495)
T 3fw9_A 488 PQSIPPMA 495 (495)
T ss_dssp TTCCCCCC
T ss_pred CCCCCCCC
Confidence 99999875
No 3
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=7.8e-65 Score=519.91 Aligned_cols=389 Identities=46% Similarity=0.893 Sum_probs=317.6
Q ss_pred CCCCCceEEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccccccccEeEEEEEc
Q 042619 1 LAKLRSIEVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARIVD 80 (402)
Q Consensus 1 l~~~~~i~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~vv~ 80 (402)
|++||+|++|+++++|+||||++++||+++|.++|..+++++|.|++||+||+++|||+|+++++||+++|||+++||||
T Consensus 106 l~~~~~v~~d~~~~~~~v~~G~~~~~~~~~l~~~g~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~vV~ 185 (500)
T 3tsh_A 106 LNKMRAVWVDGKARTAWVDSGAQLGELYYAIYKASPTLAFPAGVCPTIGVGGNFAGGGFGMLLRKYGIAAENVIDVKLVD 185 (500)
T ss_dssp CTTCCCEEEETTTTEEEEETTSBHHHHHHHHHHHCTTEECCCCSSTTSBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEEC
T ss_pred CcCCCCEEECCCCCEEEEccCcCHHHHHHHHHHhCCCcccCCCCCCCceecCccccccCCccccccCChhhheeeEEEEC
Confidence 68999999999999999999999999999999999888889999999999999999999999999999999999999999
Q ss_pred CCCcEEeccCCCCChHHHHhhcCCCCceEEEEEEEEeeecCceEEEEEEEecchhhHHHHHHHHHHHHhhccccceeeEE
Q 042619 81 ARGRILDREAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTLEQGATKILYKWQQVADKLDEDLFIRVI 160 (402)
Q Consensus 81 ~dG~~~~~~~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (402)
+||++++++.+++|||||+|||++|+|||||++++|++|.|+.+..+...+...+.+.+++..|+.+.+++|+++...+.
T Consensus 186 a~G~i~~~~~~~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 265 (500)
T 3tsh_A 186 ANGKLHDKKSMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVSEGAVDIINKWQVVAPQLPADLMIRII 265 (500)
T ss_dssp TTSCEECHHHHCHHHHHHHTTSCSSTTCEEEEEEEECEECCSCEEEEEEEEETTTTHHHHHHHHHHHGGGSCTTEEEEEE
T ss_pred CCceEEECCCCChHHHHHHHhhcccceEEEEEEEEEEEeCCCeEEEEEEecCcHHHHHHHHHHHHHhhhccChhhEEEEE
Confidence 99999986667899999999888899999999999999999987777776666566778899999999999988876655
Q ss_pred EeeccCCCCCCceeEEEEEEEEecChHHHHHHHhhhccCCCCCcCcccccchHHHHHHhhccCCCCchhhhhhhhhcccc
Q 042619 161 IKLANAGPKGKRTVTTSYNALFLGDSERLLQVMHMWFPELGLTRNDCIETSWIRSVLYIADFQNNTEPEILLEAEFLFKN 240 (402)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (402)
... ....+..+|.|+.+++...+.+.++.++.....+..++|++...+..........+.+.++......
T Consensus 266 ~~~----------~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (500)
T 3tsh_A 266 AQG----------PKATFEAMYLGTCKTLTPLMSSKFPELGMNPSHCNEMSWIQSIPFVHLGHRDALEDDLLNRQNSFKP 335 (500)
T ss_dssp ESS----------SEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHHHHHHCCSSCHHHHHHCCCCCCCC
T ss_pred ecC----------CCcEEEEEEecchhhhhhhhhhcchhccCCccccchhhhhccchhhhhccccccccccccccccccc
Confidence 431 1345678899999888887777777777666666777888876554432222222223333222233
Q ss_pred cccccccccCCCCCHHHHHHHHHHHhcCC-CcEEEEeeCCCCCCCCCCCCCCCccccCceEEEEEEEEeCCCCccchhhH
Q 042619 241 YFKAKSDFVKEPIPESVLEGLWKMLLEED-NPVMIWNPYGGMMSKISEYEIPFPHRKGNIFKIQYLTLWKDGDQKNATKH 319 (402)
Q Consensus 241 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~Gg~~~~~~~~~ta~~~R~~~~~~~~~~~~w~~~~~~~~~~~ 319 (402)
+.+.++.++.+.++++.++.+++.+...+ ...+.++++||+++++++++++|+||++..+++.+...|.++. .+++.
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gga~~~~~~~ata~~~R~~~l~~i~~~~~w~~~~--~~~~~ 413 (500)
T 3tsh_A 336 FAEYKSDYVYQPFPKTVWEQILNTWLVKPGAGIMIFDPYGATISATPESATPFPHRKGVLFNIQYVNYWFAPG--AAAAP 413 (500)
T ss_dssp EEEEEEEEECSCCCHHHHHHHHHTGGGSTTCCEEEEEECCHHHHHSCTTSSSCCCCTTCCEEEEEEEEECSTT--CCHHH
T ss_pred hhhhhhhhhcccCcHHHHHHHHHHhhcCCCceEEEEcccCccccCCCCccCcCcccCCcEEEEEEEEecCCcc--hhHHH
Confidence 34445666777788888888777765544 4567789999999999999999999997778999999998775 35678
Q ss_pred HHHHHHHHHhccccccCCCCceeccccCCccCCCCC--CCcchhcccccccccccccHHHHHHhhhccCCCCCCcCCCCC
Q 042619 320 NGWIRRLYDYMAPYASIFPRAAYVNYRDLDLGLNKK--FNTSYTEASAWGTKYFKDNFNRLVRVKIKVDPDNIFRHEQSI 397 (402)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~g~Y~N~~d~~~~~~~~--~~~~~~~~~~w~~~~~g~n~~rL~~iK~kyDP~~lF~~~~~i 397 (402)
.+|++++.+.+.|+.+..+.++|+||+|.+++.++. ....|...++|++.|||+||+||++||+||||+|||+++|+|
T Consensus 414 ~~~~~~~~~~~~~~~~~~~~~aY~Ny~D~dlg~~~~~~~~~~~~~~~~w~~~Y~g~Ny~RL~~IK~kyDP~nvF~~~qsI 493 (500)
T 3tsh_A 414 LSWSKDIYNYMEPYVSKNPRQAYANYRDIDLGRNEVVNDVSTYASGKVWGQKYFKGNFERLAITKGKVDPTDYFRNEQSI 493 (500)
T ss_dssp HHHHHHHHHHHGGGSCCSSCCCCTTSCCGGGCCCCEETTEECHHHHHHHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTSC
T ss_pred HHHHHHHHHHHHHHhcCCCCeEEeccccccccccccccccccccccchHHHHhhhHHHHHHHHHHHHhCcccccCCCCCC
Confidence 899999999999998766779999999998763221 112334446899999999999999999999999999999999
Q ss_pred CCCC
Q 042619 398 PPVP 401 (402)
Q Consensus 398 ~~~~ 401 (402)
+|..
T Consensus 494 ~Pl~ 497 (500)
T 3tsh_A 494 PPLI 497 (500)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9974
No 4
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=6.4e-60 Score=478.92 Aligned_cols=369 Identities=25% Similarity=0.420 Sum_probs=293.6
Q ss_pred CCCCCceE-EeCCCCEEEEcCCCCHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccccccccEeEEEEE
Q 042619 1 LAKLRSIE-VDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARIV 79 (402)
Q Consensus 1 l~~~~~i~-~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~vv 79 (402)
|++||+|+ +|++.++++||+|+++++|+++|.++| .+.+|.|.|++|||||+++|||+|..+++||+.+|+|+++|||
T Consensus 88 l~~~~~i~~vd~~~~~v~v~aG~~~~~l~~~l~~~G-~~~~p~G~~~~vgvgG~~~ggg~G~~~~~~G~~~D~v~~~~vV 166 (473)
T 3rja_A 88 LDRMIDVISYNDKTGIAHVEPGARLGHLATVLNDKY-GRAISHGTCPGVGISGHFAHGGFGFSSHMHGLAVDSVVGVTVV 166 (473)
T ss_dssp CTTCCCEEEEETTTTEEEECTTCBHHHHHHHHHHHH-SEECCCCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEE
T ss_pred CCCCCceEEEcCCCCEEEECCCCCHHHHHHHHHHcC-CEEeccCCCCCcEeeeeccCCCCCcccccccchHhheeeEEEE
Confidence 67899997 999999999999999999999999997 3778899999999999999999999999999999999999999
Q ss_pred cCCCcEEe-ccCCCCChHHHHhhcCCCCceEEEEEEEEeeecCceEEEEEEEecch--hhHHHHHHHHHHHHh-hccccc
Q 042619 80 DARGRILD-REAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTLE--QGATKILYKWQQVAD-KLDEDL 155 (402)
Q Consensus 80 ~~dG~~~~-~~~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~ 155 (402)
++||++++ +..+++|||||+||++ |+|||||+++||++|.|+....+.+.+.+. .++.++++.|+++.. ++|+++
T Consensus 167 ~a~G~v~~~~~~~~~dLf~a~rG~~-g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l 245 (473)
T 3rja_A 167 LADGRIVEASATENADLFWGIKGAG-SNFGIVAVWKLATFPAPKVLTRFGVTLNWKNKTSALKGIEAVEDYARWVAPREV 245 (473)
T ss_dssp CTTSCEEEEETTBSHHHHHHHHHHG-GGTCEEEEEEEECEECCSCEEEEEEECCCCSHHHHHHHHHHHHHHHHHTCCTTE
T ss_pred ecCCeEEEeCCCCCcchhhcccCCC-CceEEEEEEEEEEEeCCCceEEEEEEecCccHHHHHHHHHHHHHHhhhCCChhH
Confidence 99999997 6677899999999997 899999999999999998877777777653 347789999999988 899999
Q ss_pred eeeEEEeeccCCCCCCceeEEEEEEEEecChHHHHHHHhhhccCCC-CCcCccc-ccchHHHHHHhhccCCCCchhhhhh
Q 042619 156 FIRVIIKLANAGPKGKRTVTTSYNALFLGDSERLLQVMHMWFPELG-LTRNDCI-ETSWIRSVLYIADFQNNTEPEILLE 233 (402)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~l~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (402)
+..+.+. . .. .+.+.++|+|+.+++.+.+++.+...+ +...++. +++|++...++..... .+...+
T Consensus 246 ~~~~~~~-~-----~~---~~~~~~~~~G~~~~~~~~l~pl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 313 (473)
T 3rja_A 246 NFRIGDY-G-----AG---NPGIEGLYYGTPEQWRAAFQPLLDTLPAGYVVNPTTSLNWIESVLSYSNFDH---VDFITP 313 (473)
T ss_dssp EEEEEES-S-----SS---CCEEEEEEESCHHHHHHHHHHHHTTSCTTCEECCCEEECHHHHHHHTSSSSC---CCCSSC
T ss_pred EEEEEEc-C-----CC---cEEEEEEecCCHHHHHHHHHHHHHhCCCCcceeeecccCHHHHHHhhhcCCC---cccccC
Confidence 8877764 1 11 156778999999998888876443322 2445667 8999998766542111 111101
Q ss_pred hhhcccccccccccccCCCCCHHHHHHHHHHHhcCC------CcEEEEeeCCC---CCCCCCCCCCCCccccCceEEEEE
Q 042619 234 AEFLFKNYFKAKSDFVKEPIPESVLEGLWKMLLEED------NPVMIWNPYGG---MMSKISEYEIPFPHRKGNIFKIQY 304 (402)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~------~~~~~~~~~Gg---~~~~~~~~~ta~~~R~~~~~~~~~ 304 (402)
. ....|+.|+.+. ++++++.++.+++.+.+.. .+.+.++++|| ++++++.++||||||+ ..|.+++
T Consensus 314 --~-~~~~~~~ks~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~ai~~v~~~~TAf~hR~-~~~~~~~ 388 (473)
T 3rja_A 314 --Q-PVENFYAKSLTL-KSIKGDAVKNFVDYYFDVSNKVKDRFWFYQLDVHGGKNSQVTKVTNAETAYPHRD-KLWLIQF 388 (473)
T ss_dssp --C-CCBEEEEEEEEE-SCCTTHHHHHHHHHHHHTGGGCCSSEEEEEEEECCSTTCGGGGSCTTTSSCCCTT-CSEEEEE
T ss_pred --C-CCCcceEecccc-CCCCHHHHHHHHHHHHhcCCCCCCcceEEEEEecCCcchhhcCCCCCCCccccCC-ccEEEEE
Confidence 0 023455677665 4588999999998885421 13577999998 5778889999999999 6899999
Q ss_pred EEEeCCCCccchhhHHHHHHHHHHhccccccCCCCceeccccCCccCCCCCCCcchhcccccccccccccHHHHHHhhhc
Q 042619 305 LTLWKDGDQKNATKHNGWIRRLYDYMAPYASIFPRAAYVNYRDLDLGLNKKFNTSYTEASAWGTKYFKDNFNRLVRVKIK 384 (402)
Q Consensus 305 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~Y~N~~d~~~~~~~~~~~~~~~~~~w~~~~~g~n~~rL~~iK~k 384 (402)
...|.+.. +.+++..+|++++++.+.+.....+.|+|+||+|.+++ .++|.+.|||+||+||++||+|
T Consensus 389 ~~~w~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~YvNy~d~~~~-----------~~~~~~~yyg~n~~RL~~vK~k 456 (473)
T 3rja_A 389 YDRYDNNQ-TYPETSFKFLDGWVNSVTKALPKSDWGMYINYADPRMD-----------RDYATKVYYGENLARLQKLKAK 456 (473)
T ss_dssp EEEECTTS-CCCTTTHHHHHHHHHHHHTTSCGGGEECCGGGCCCSSC-----------HHHHHHHHHGGGHHHHHHHHHH
T ss_pred EEEeCCCC-ccchHHHHHHHHHHHHHHhhCCCCCCceEecCCCcccc-----------chhHHHHHHHHHHHHHHHHhhc
Confidence 99996411 22355677888777776544322345899999998754 1369999999999999999999
Q ss_pred cCCCCCCcCCCCCCCC
Q 042619 385 VDPDNIFRHEQSIPPV 400 (402)
Q Consensus 385 yDP~~lF~~~~~i~~~ 400 (402)
|||+|+|+++|+|+|.
T Consensus 457 yDP~n~F~~~qsI~p~ 472 (473)
T 3rja_A 457 FDPTDRFYYPQAVRPV 472 (473)
T ss_dssp HCTTCTTCCTTSCCCC
T ss_pred cCchhhCCCCcCCCCC
Confidence 9999999999999984
No 5
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=100.00 E-value=2.6e-58 Score=469.26 Aligned_cols=373 Identities=23% Similarity=0.440 Sum_probs=279.6
Q ss_pred CCCCCceEEeCCCCEEEEcCCCCHHHHHHHHHh-cCCceeeccCCCCcccchhhhcCCCCCCcccccccccccEeEEEEE
Q 042619 1 LAKLRSIEVDINNKTAWVQAGATIGELYYRISE-KSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARIV 79 (402)
Q Consensus 1 l~~~~~i~~d~~~~~~~v~~G~~~~~l~~~l~~-~~~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~vv 79 (402)
|++||+|++|+++++|+||+|+++++|+++|.+ +| +.++.|.|++|||||+++|||+|.++++||+.+|+|+++|||
T Consensus 85 l~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~~~evV 162 (501)
T 3pop_A 85 LHNLHAIGPAADGAGVRVGSGATVDQVQKALFRRWN--AALPLGACSAVGMGGLVAGGGYGPLSRQLGLVVDHLHAVEVA 162 (501)
T ss_dssp CTTCCCEEECTTSSSEEEETTCBHHHHHHHHHHHHS--BCCCCCSBTTCBHHHHHHHCCCCTTHHHHCCGGGGEEEEEEE
T ss_pred ecccCCeEEcCCCCEEEEECCcCHHHHHHHHHhhcC--eEeCCCCCCCceEeeccccCCCcccccccccHHHhEEEEEEE
Confidence 689999999999999999999999999999974 56 678899999999999999999999999999999999999999
Q ss_pred c--CCCc--EEe----ccCCCCChHHHHhhcCCCCceEEEEEEEEe----------eecC-ceEEEEEEEecch----hh
Q 042619 80 D--ARGR--ILD----REAMGEDLFWAIRGGGGGSFGIILAWKVKL----------VPVP-ATVTVFTVSKTLE----QG 136 (402)
Q Consensus 80 ~--~dG~--~~~----~~~~~~dLf~a~~G~g~g~~Gvvt~~~~~~----------~~~~-~~~~~~~~~~~~~----~~ 136 (402)
+ +||+ +++ ++.+|+|||||+||||+|+|||||+++||+ +|.+ ..+..+.+.|... +.
T Consensus 163 ~~da~G~~~~v~~~~~~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~~~~~~~~~~~~p~~~~~v~~~~~~~~~~~~~~~~ 242 (501)
T 3pop_A 163 VVDESRTVRLVTARADDTGDLGELFWAHTGGGGGNFGVVTAYEFRSPEHLATEPVGLPRAAGRLHVQKVVFPWAMIDETS 242 (501)
T ss_dssp EECTTSCEEEEEEETTCCHHHHHHHHHTTTSCTTSSCEEEEEEECCCTTTCBTTTTBCBCCSEEEEEEEEEEGGGCCHHH
T ss_pred EecCCCCEEEEEeccCCCCCCccHHHHhhccCCCCcEEEEEEEEEeccccCCChhhcCCCCceEEEEEEEEchhhcCHHH
Confidence 9 8999 443 245689999999998669999999999999 6654 4555566666542 23
Q ss_pred HHHHHHHHHHHHh--hcccc----ceeeEEEeeccCCCCCCceeEEEEEEEEecChHHHHHHHhhhccC----CC-CCcC
Q 042619 137 ATKILYKWQQVAD--KLDED----LFIRVIIKLANAGPKGKRTVTTSYNALFLGDSERLLQVMHMWFPE----LG-LTRN 205 (402)
Q Consensus 137 ~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~l~~~~~~----~~-~~~~ 205 (402)
+.++++.|+++.. ..|++ +...+.+... ..+ .+.+...+.|+.+++.+.+++.+.. ++ .+..
T Consensus 243 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~g~~~~~~~~l~~~~~~~~~~~g~~p~~ 315 (501)
T 3pop_A 243 FVTVMRRFFEWHERHSEPGSPESSLFATFFVNHV---SSG----VLQLMVQQDADVDPEGEILARFVASLTEGTGVVGIP 315 (501)
T ss_dssp HHHHHHHHHHHHHHSCCTTCGGGGEEEEEEEECG---GGC----EEEEEEEEETTTCTTCHHHHHHHHHHHTTSSCCCEE
T ss_pred HHHHHHHHHHHHhhccCCCccccceEEEEEecCC---CCC----eEEEEEEEeCChHHHHHHHHHHHHhhhhccCCCccc
Confidence 4577777888765 34443 2222222211 111 2345566788876554444432221 12 1122
Q ss_pred cccccchHHHHHHhhccCCCCchhhhhhhhhcccccccccccccCCCCCHHHHHHHHHHHhcC---CCcEEEEeeCCCCC
Q 042619 206 DCIETSWIRSVLYIADFQNNTEPEILLEAEFLFKNYFKAKSDFVKEPIPESVLEGLWKMLLEE---DNPVMIWNPYGGMM 282 (402)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~Gg~~ 282 (402)
++.+++|++...+.. .+.+.+ . ...+++.|+.++.++++++.++.+++.+.+. +.+.+.++++||++
T Consensus 316 ~~~~~~~~~~~~~~~-~~~~~~--~-------~~~~~~~ks~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~GGav 385 (501)
T 3pop_A 316 RGGVMSWLTGTRYMS-QADCGD--V-------MGARSASKSAYHRAAPTDEQLSVLHRHLHADHPGQASYVMFNSYGGEI 385 (501)
T ss_dssp EEEEEEHHHHHHHTC-BCSCGG--G-------TTCEEEEEEEEESSCCCHHHHHHHHHHHTSSSCCTTEEEEEEECCGGG
T ss_pred eeEEeCHHHHHhhhc-CCCCCc--c-------cccccceecccccCCCCHHHHHHHHHHHHhcCCCCceEEEEEecCccc
Confidence 367889998765432 111100 0 0134566788887779999999999988763 23578899999999
Q ss_pred CCCCCCCCCCccccCceEEEEEEEEeCCCCccchhhHHHHHHHHHHhcccccc------CCCCceeccccCCccCCCCCC
Q 042619 283 SKISEYEIPFPHRKGNIFKIQYLTLWKDGDQKNATKHNGWIRRLYDYMAPYAS------IFPRAAYVNYRDLDLGLNKKF 356 (402)
Q Consensus 283 ~~~~~~~ta~~~R~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~g~Y~N~~d~~~~~~~~~ 356 (402)
++++.++|||+||+ ..|++++...|.++. .+++..+|++++++.|.++.. ..+.|+|+||+|.+++.++.|
T Consensus 386 ~~v~~~~TAf~hR~-~~~~~~~~~~w~~~~--~~~~~~~w~~~~~~~~~~~~~g~p~~~~~~~gaYvNy~d~dl~~~~~~ 462 (501)
T 3pop_A 386 NRRGPSDAAVPQRD-SVVKSSWFSAWQDAE--LDELHLGWLRGLYEEFFAGTGGVPVTGGRTDGCYINYPDADLLDPARN 462 (501)
T ss_dssp GGSCTTTSSCCCCS-CSEEEEEEEEESCGG--GHHHHHHHHHHHHHHHTGGGTTSCCTTSSBCCCCTTSCCGGGGCTTTC
T ss_pred ccCCCCCCCccCcC-ccEEEEEEEEeCCcc--hHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCceeccCCCccccccccc
Confidence 99999999999999 689999999997653 457788999999999976642 224689999999886521111
Q ss_pred CcchhcccccccccccccHHHHHHhhhccCCCCCCcCCCCCCC
Q 042619 357 NTSYTEASAWGTKYFKDNFNRLVRVKIKVDPDNIFRHEQSIPP 399 (402)
Q Consensus 357 ~~~~~~~~~w~~~~~g~n~~rL~~iK~kyDP~~lF~~~~~i~~ 399 (402)
.....|++.|||+||+||++||+||||+|+|+++|+|+|
T Consensus 463 ----~~~~~w~~~Yyg~N~~RL~~vK~kyDP~n~F~~~qsI~p 501 (501)
T 3pop_A 463 ----RSGEPWHHLYYKDNYARLRSAKRAWDPLNTFHHSMSIGL 501 (501)
T ss_dssp ----CSSCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred ----cccchHHHHHhHhHHHHHHHHHHHhCcccccCCCCCCCC
Confidence 112359999999999999999999999999999999987
No 6
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=100.00 E-value=2.7e-54 Score=443.12 Aligned_cols=374 Identities=27% Similarity=0.495 Sum_probs=272.6
Q ss_pred CCCCCceEEeCCCCEEEEcCCCCHHHHHHHHHh-cCCceeeccCCCCcccchhhhcCCCCCCcccccccccccEeEEEEE
Q 042619 1 LAKLRSIEVDINNKTAWVQAGATIGELYYRISE-KSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARIV 79 (402)
Q Consensus 1 l~~~~~i~~d~~~~~~~v~~G~~~~~l~~~l~~-~~~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~vv 79 (402)
|++||+|++|+++++|+||+|+++++|+++|.+ +| +.++.|.|++|||||+++|||+|+++++||+.+|+|+++|||
T Consensus 109 l~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~evV 186 (530)
T 2y3s_A 109 MSRLSAVGFDEERGAFAVEAGATLGAVYKTLFRVWG--VTLPGGACPDVGAGGHILGGGYGPLSRMHGSIVDYLHAVEVV 186 (530)
T ss_dssp CTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHHS--CCCCCCSCTTCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEE
T ss_pred cccCCCEEEcCCCCEEEEeCCCCHHHHHHHHHhhcC--eEEeCCCCCCCCcCCCcCCCCCCcccccccchhhheeeEEEE
Confidence 678999999999999999999999999999985 77 567889999999999999999999999999999999999999
Q ss_pred c--CCCcEE--e-ccC-CCCC--hHHHHhhcCCCCceEEEEEEEEe------------eecCc-eEEEEEEEecch----
Q 042619 80 D--ARGRIL--D-REA-MGED--LFWAIRGGGGGSFGIILAWKVKL------------VPVPA-TVTVFTVSKTLE---- 134 (402)
Q Consensus 80 ~--~dG~~~--~-~~~-~~~d--Lf~a~~G~g~g~~Gvvt~~~~~~------------~~~~~-~~~~~~~~~~~~---- 134 (402)
+ +||+++ + +.+ +++| ||||+||||+|+|||||+++||+ +|.|+ .+....+.|...
T Consensus 187 ~~d~~G~i~~v~~~~~~~~~d~DLf~a~rG~g~g~fGIVt~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 266 (530)
T 2y3s_A 187 VVDASGDARTVIATREPSDPNHDLWWAHTGGGGGNFGVVVRYWLRTAEADVPPEPGRLLPRPPAEVLLNTTVWPWEGLDE 266 (530)
T ss_dssp EECTTSCEEEEEEESCTTCTTHHHHHHTTTSCTTSSCEEEEEEECCCCSSCCSCGGGSSCCCCSEEEEEEEEEESTTCCH
T ss_pred EecCCCcEEEEeccccccCCChHHHHHHhcCCCCCcEEEEEEEEEeecccCccccccccCCCCceEEEEEEEecccccCH
Confidence 9 559974 2 433 5665 99999998668999999999999 88875 455555555431
Q ss_pred hhHHHHHHHHHHHHhh--cccc----ceeeEEEeeccCCCCCCceeEEEEEEEEecChHHHHHHHhhh---ccC-CC-CC
Q 042619 135 QGATKILYKWQQVADK--LDED----LFIRVIIKLANAGPKGKRTVTTSYNALFLGDSERLLQVMHMW---FPE-LG-LT 203 (402)
Q Consensus 135 ~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~l~~~---~~~-~~-~~ 203 (402)
..+.++++.|+++... .|++ +...+.+... ... .+.+...|.|+.++..+.+++. +.. ++ +.
T Consensus 267 ~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-----~~~--~~~~~~~~~g~~~~~~~~l~p~~~~l~~~~g~~~ 339 (530)
T 2y3s_A 267 AAFARLVRNHGRWFEQNSGPDSPWCDLYSVLALTRS-----QSG--ALAMTTQLDATGPDAEKRLETYLAAVSEGVGVQP 339 (530)
T ss_dssp HHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEECG-----GGS--EEEEEEEEECCSTTHHHHHHHHHHHHHTTCSSCC
T ss_pred HHHHHHHHHHHHHhhhcCCCCcccceeEEEEEeccC-----CCC--cEEEEEEEeCCHHHHHHHHHHHHHHHHhhcCCCc
Confidence 2345778788887654 3443 2332322211 111 2344556788776655544432 222 23 22
Q ss_pred cCcccccchHHHHHHhhccCCCCchhhhhhhhhcccccccccccccCCCCCHHHHHHHHHHHhcCC----CcEEEEeeCC
Q 042619 204 RNDCIETSWIRSVLYIADFQNNTEPEILLEAEFLFKNYFKAKSDFVKEPIPESVLEGLWKMLLEED----NPVMIWNPYG 279 (402)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~G 279 (402)
...+..++|.+..........+. .. .+++.++.++.+.++++.+..+++.+.+.+ .+.+.++++|
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~----------~~-~r~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~G 408 (530)
T 2y3s_A 340 HSDTRRLPWLHSTRWPGIAGDGD----------MT-GRAKIKAAYARRSFDDRQIGTLYTRLTSTDYDNPAGVVALIAYG 408 (530)
T ss_dssp EEEEEEEEHHHHTTCHHHHCCCC----------CC-SEEEEEEEEESSCCCHHHHHHHHHHHHCSSSCCTTCEEEEEECC
T ss_pred cceeeeccHHHHHHhhcCCCCCc----------cc-ccceeeccccccCCCHHHHHHHHHHHHhcCCCCCceEEEEEecC
Confidence 34456678876432221111100 00 123446666666688888999999887532 3678899999
Q ss_pred CCCCCCCCCCCCCccccCceEEEEEEEEeCCCCccchhhHHHHHHHHHHhcc------ccccCCCCceeccccCCccCCC
Q 042619 280 GMMSKISEYEIPFPHRKGNIFKIQYLTLWKDGDQKNATKHNGWIRRLYDYMA------PYASIFPRAAYVNYRDLDLGLN 353 (402)
Q Consensus 280 g~~~~~~~~~ta~~~R~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~Y~N~~d~~~~~~ 353 (402)
|++++++.+++||+||+ ..|++++...|.++. .+++..+|++++.+.+. |+.+....|+|+||+|.+++.+
T Consensus 409 Gav~~~~~~~ta~~~R~-~~~~~~~~~~w~~~~--~~~~~~~w~~~~~~~l~~~~~g~p~~~~~~~g~Y~Ny~d~~~~~~ 485 (530)
T 2y3s_A 409 GKVNAVPADRTAVAQRD-SILKIVYVTTWEDPA--QDPVHVRWIRELYRDVYADTGGVPVPGGAADGAYVNYPDVDLADE 485 (530)
T ss_dssp GGGGGSCTTSSSCCCCS-CSEEEEEEEEECCTT--CHHHHHHHHHHHHHHHTGGGTTSCCTTTTBCCCCTTSCCGGGGCT
T ss_pred CccccCCCCcCcccccc-cceeEEEEEecCCCc--chHHHHHHHHHHHHHHHhhhcCCCcccCCCCceEeCCcCcccccc
Confidence 99999999999999999 689999999998764 35678899999988887 3311113579999999886421
Q ss_pred CCCCcchhcccccccccccccHHHHHHhhhccCCCCCCcCCCCCCCCC
Q 042619 354 KKFNTSYTEASAWGTKYFKDNFNRLVRVKIKVDPDNIFRHEQSIPPVP 401 (402)
Q Consensus 354 ~~~~~~~~~~~~w~~~~~g~n~~rL~~iK~kyDP~~lF~~~~~i~~~~ 401 (402)
+ .++++ ..|++.|||+||+||++||+||||+|||+++|+|+|+|
T Consensus 486 ~-~~~s~---~~~~~~yyg~n~~RL~~iK~kyDP~nvF~~~q~I~p~~ 529 (530)
T 2y3s_A 486 E-WNTSG---VPWSELYYKDAYPRLQAVKARWDPRNVFRHALSVRVPP 529 (530)
T ss_dssp T-TCCSS---CCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCCC
T ss_pred c-cccch---hHHHHHHHHHHHHHHHHHHHHhCchhhcCCCCCCCCCC
Confidence 0 01111 24999999999999999999999999999999999875
No 7
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=100.00 E-value=1.2e-54 Score=445.44 Aligned_cols=371 Identities=26% Similarity=0.472 Sum_probs=269.2
Q ss_pred CCCCCceEEeCCCCEEEEcCCCCHHHHHHHHHh-cCCceeeccCCCCcccchhhhcCCCCCCcccccccccccEeEEEEE
Q 042619 1 LAKLRSIEVDINNKTAWVQAGATIGELYYRISE-KSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARIV 79 (402)
Q Consensus 1 l~~~~~i~~d~~~~~~~v~~G~~~~~l~~~l~~-~~~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~vv 79 (402)
|++||+|++|+++++|+||+|+++++|+++|.+ +| +.++.|.|++|||||+++|||+|+++++||+.+|+|+++|||
T Consensus 108 l~~m~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~evV 185 (523)
T 2wdx_A 108 MSLLTEIAYDPSMNAFLIEPGNTLSEVYEKLYLGWN--VTIPGGVCGGVGVGGHICGGGYGPLSRQFGSVVDYLYAVEVV 185 (523)
T ss_dssp CTTCCCEEEETTTTEEEECTTCBHHHHHHHHHHHHS--CCCCCCCCTTCBHHHHHHHTCCCTTHHHHCCGGGGEEEEEEE
T ss_pred cccCCCEEEcCCCCEEEEcCCCCHHHHHHHHHHhcC--eEEccCCCCCCeeCccccCCCCCcccccccChhheEEEEEEE
Confidence 679999999999999999999999999999984 77 567889999999999999999999999999999999999999
Q ss_pred cCC--CcEEe---ccC-CCCC--hHHHHhhcCCCCceEEEEEEEEe-----------eecCc-eEEEEEEEecch----h
Q 042619 80 DAR--GRILD---REA-MGED--LFWAIRGGGGGSFGIILAWKVKL-----------VPVPA-TVTVFTVSKTLE----Q 135 (402)
Q Consensus 80 ~~d--G~~~~---~~~-~~~d--Lf~a~~G~g~g~~Gvvt~~~~~~-----------~~~~~-~~~~~~~~~~~~----~ 135 (402)
++| |+++. +.. +++| ||||+|||++|+|||||+++||+ +|.|+ .+..+.+.|+.. +
T Consensus 186 ~~d~~G~v~~~~~~~~~~~~~~DLf~a~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 265 (523)
T 2wdx_A 186 VVNKQGKARVIVATRERDDPHHDLWWAHTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPKPPATLLTSTVTFDWAGMTEA 265 (523)
T ss_dssp EECTTSCEEEEEEESCTTCTTHHHHHHTTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCCCCSEEEEEEEECCGGGCCHH
T ss_pred EecCCccEEEEecccccCCCChHHHHHhhccCCCCcEEEEEEEEEeecccCCCcccccCCCcccEEEEEEEecccccCHH
Confidence 955 99752 332 5666 99999987778999999999999 99876 355566666542 2
Q ss_pred hHHHHHHHHHHHHhh--cccc----ceeeEEEeeccCCCCCCceeEEEEEEEEecChHHHHHHHhhh---ccC-CC-CCc
Q 042619 136 GATKILYKWQQVADK--LDED----LFIRVIIKLANAGPKGKRTVTTSYNALFLGDSERLLQVMHMW---FPE-LG-LTR 204 (402)
Q Consensus 136 ~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~l~~~---~~~-~~-~~~ 204 (402)
.+.++++.|+++... .|++ +...+.+... ..+...+.+.+..+|.|+.++..+.+++. +.+ ++ +..
T Consensus 266 ~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~g~~~~~~~~l~~~~~~l~~~~~~~~~ 342 (523)
T 2wdx_A 266 AFSRLLRNHGEWYERNSGPDSPYTGLWSQLMIGNE---VPGMGESGFMMPIQVDATRPDARRLLDAHIEAVIDGVPPAEV 342 (523)
T ss_dssp HHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEECC---CTTCTTCSEEEEEEEETTSTTHHHHHHHHHHHHHTTCTTCBC
T ss_pred HHHHHHHHHHHHHhhcCCCCccccceEEEEEeccC---CCCCcceeEEEEEEEeCCHHHHHHHHHHHHHHHHhhcCCCcc
Confidence 345778888887754 4554 2222222211 11210123455667888876655555432 222 23 222
Q ss_pred CcccccchHHHHHHhhccCCCCchhhhhhhhhcccccccccccccCCCCCHHHHHHHHHHHhcC---CCcEEEEeeCCCC
Q 042619 205 NDCIETSWIRSVLYIADFQNNTEPEILLEAEFLFKNYFKAKSDFVKEPIPESVLEGLWKMLLEE---DNPVMIWNPYGGM 281 (402)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~Gg~ 281 (402)
..+..++|.+....+. . . . .+++.++.++.+.++.+.+..+++.+... +.+.+.+..+||+
T Consensus 343 ~~~~~~~~~~~~~~~~----~-----~-----~--~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~ 406 (523)
T 2wdx_A 343 PEPIEQRWLASTPGRG----G-----R-----G--PASKTKAGYLRKRLTDRQIQAVYENMTHMDGIDYGAVWLIGYGGK 406 (523)
T ss_dssp CCCEEEETTSSCCCCC----S-----S-----C--CEEEEEEEEESSCCCHHHHHHHHHHHTCCTTCSEEEEEEEECCGG
T ss_pred ccceeccHHHHHHhhc----C-----C-----C--CceeeecccccCCCCHHHHHHHHHHHHhcCCCCceEEEEEecCCc
Confidence 3344556654211000 0 0 0 12333566665567888898899988653 2356778899999
Q ss_pred CCCCCCCCCCCccccCceEEEEEEEEeCCCCccchhhHHHHHHHHHHhcc------ccccCCCCceeccccCCccCCCCC
Q 042619 282 MSKISEYEIPFPHRKGNIFKIQYLTLWKDGDQKNATKHNGWIRRLYDYMA------PYASIFPRAAYVNYRDLDLGLNKK 355 (402)
Q Consensus 282 ~~~~~~~~ta~~~R~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~Y~N~~d~~~~~~~~ 355 (402)
+++++.++++|+||+ ..|++++...|.++. .+++..+|++++++.+. |+.+....|+|+||+|.+++.++
T Consensus 407 v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~~--~~~~~~~~~~~~~~~l~~~~~g~p~~~~~~~g~Y~Ny~d~~~~~~~- 482 (523)
T 2wdx_A 407 VNTVDPAATALPQRD-AILKVNYITGWANPG--NEAKHLTWVRKLYADVYAETGGVPVPNDVSDGAYINYPDSDLADPG- 482 (523)
T ss_dssp GGGSCTTTSSCCCCS-CSEEEEEEEEESSGG--GHHHHHHHHHHHHHHHTGGGTTSCCSCSSBCCCCTTSCCGGGGCTT-
T ss_pred cccCCCccccccccC-ceEEEEEEEEcCCCc--cHHHHHHHHHHHHHHHHhhhcCCCccCCCCCcceecCCcccccccc-
Confidence 999999999999999 689999999998663 45678899999988887 33111135799999998864110
Q ss_pred CCcchhcccccccccccccHHHHHHhhhccCCCCCCcCCCCCCC
Q 042619 356 FNTSYTEASAWGTKYFKDNFNRLVRVKIKVDPDNIFRHEQSIPP 399 (402)
Q Consensus 356 ~~~~~~~~~~w~~~~~g~n~~rL~~iK~kyDP~~lF~~~~~i~~ 399 (402)
.++++ ..|++.|||+||+||++||+||||+|||+++|+|+|
T Consensus 483 ~~~s~---~~~~~~yyg~n~~RL~~iK~kyDP~~vF~~~qsI~p 523 (523)
T 2wdx_A 483 LNTSG---VPWHDLYYKGNHPRLRKVKAAYDPRNHFHHALSIRP 523 (523)
T ss_dssp TCCSS---CCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred cccch---hHHHHHHHHHHHHHHHHHHHHhCcHhhcCCCCCCCC
Confidence 01111 149999999999999999999999999999999986
No 8
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=100.00 E-value=2.3e-54 Score=441.84 Aligned_cols=367 Identities=24% Similarity=0.461 Sum_probs=275.9
Q ss_pred CCCCCceEEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccccccccEeEEEEEc
Q 042619 1 LAKLRSIEVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARIVD 80 (402)
Q Consensus 1 l~~~~~i~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~vv~ 80 (402)
|++||+|++| ++++|+||||+++++|+++|.+++ ++.+|.|.|++|||||+++|||+|.++++||+.+|+|+++|||+
T Consensus 94 l~~l~~i~~d-~~~~v~v~aG~~~~~l~~~l~~~~-gl~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~~vV~ 171 (503)
T 1zr6_A 94 LDRMYRVSVD-DNNVATIQGGARLGYTALELLDQG-NRALSHGTCPAVGVGGHVLGGGYGFATHTHGLTLDWLIGATVVL 171 (503)
T ss_dssp CTTCCCEEEC-TTSCEEEETTCBHHHHHHHHHHTT-SEECCCCSCTTSBHHHHHHHCCCSTTHHHHCCGGGGEEEEEEEC
T ss_pred CccCCCEEEC-CCCeEEEecCCCHHHHHHHHHHcC-CEEeCCCCCCcCchhhhhcCCCCCcccccccChhheEEEEEEEe
Confidence 6789999999 889999999999999999997765 47789999999999999999999999999999999999999999
Q ss_pred CCCcEEe-ccCCCCChHHHHhhcCCCCceEEEEEEEEeeecCceEEEEEEEecc-hhhHHHHHHHHHHHHhh-cccccee
Q 042619 81 ARGRILD-REAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTL-EQGATKILYKWQQVADK-LDEDLFI 157 (402)
Q Consensus 81 ~dG~~~~-~~~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~ 157 (402)
+||++++ ++.+|+|||||+|||+ |+|||||+++||++|.|+....+.+.+.. .+++.++++.|+++... .|+++..
T Consensus 172 a~G~i~~~~~~~~~dL~~a~rG~~-g~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 250 (503)
T 1zr6_A 172 ADASIVHVSETENADLFWALRGGG-GGFAIVSEFEFNTFEAPEIITTYQVTTTWNRKQHVAGLKALQDWAQNTMPRELSM 250 (503)
T ss_dssp TTSCEEEEBTTBSHHHHHHHTTCC-SSSCEEEEEEECCEECCSCEEEEEEEECCCHHHHHHHHHHHHHHHHHTCCTTBCC
T ss_pred cCCCEEEeCCCCCccHHHHHhccC-CCcEEEEEEEEEEEecCceeEEEEEEEeCCHHHHHHHHHHHHHHHhhcCChhHEE
Confidence 9999997 6678899999999998 79999999999999999876666666654 34566888889998876 8888777
Q ss_pred eEEEeeccCCCCCCceeEEEEEEEEecChHHHHHHHhhhccCCCC--CcCcccccchHHHHHHhhccCCCCchhhhhhhh
Q 042619 158 RVIIKLANAGPKGKRTVTTSYNALFLGDSERLLQVMHMWFPELGL--TRNDCIETSWIRSVLYIADFQNNTEPEILLEAE 235 (402)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (402)
.+.+.. ..+.+..+|+|+.++..+.+++.+..++. ..+.+..++|.+....+.. +..... ..+
T Consensus 251 ~~~~~~----------~~~~~~~~~~g~~~~~~~~l~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~p 315 (503)
T 1zr6_A 251 RLEINA----------NALNWEGNFFGNAKDLKKILQPIMKKAGGKSTISKLVETDWYGQINTYLY---GADLNI--TYN 315 (503)
T ss_dssp EEEEET----------TEEEEEEEESSCHHHHHHHHHHHHHHTTSCEEEEEEEEECHHHHHTTSCT---TCCSSC--SSC
T ss_pred EEEEeC----------CeEEEEEEEECCHHHHHHHHHHHHHhcCcCCCcCceeeCCHHHHHHHHcC---CCcccc--cCC
Confidence 666542 13556678899988877777654333332 1233455677764422211 100000 001
Q ss_pred hcccccccccccccCCCCCHHHHHHHHHHHh-cCC-C----cEEEEeeCCC---CCCCCCCCCCCCccccCceEEEEEEE
Q 042619 236 FLFKNYFKAKSDFVKEPIPESVLEGLWKMLL-EED-N----PVMIWNPYGG---MMSKISEYEIPFPHRKGNIFKIQYLT 306 (402)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~-~----~~~~~~~~Gg---~~~~~~~~~ta~~~R~~~~~~~~~~~ 306 (402)
...+..++.++.++++ ++++.++.+++.+. +.+ . +.+.++++|| ++++++.++++|+||+ ..|++++..
T Consensus 316 ~g~~~~~~~~s~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~av~~~~~~~ta~~~R~-~~~~~~~~~ 393 (503)
T 1zr6_A 316 YDVHEYFYANSLTAPR-LSDEAIQAFVDYKFDNSSVRPGRGWWIQWDFHGGKNSALAAVSNDETAYAHRD-QLWLWQFYD 393 (503)
T ss_dssp CCCCBCEEEEEEEESS-CCHHHHHHHHHHHHHSCCCCTTEEEEEEEEECCSTTCSGGGSCTTTSSCCCTT-CSEEEEEEE
T ss_pred CCccccceecccchhh-CCHHHHHHHHHHHHhhCCCCCCcceEEEEEEcCCchhhhcCCCcccCCccccc-ceeEEEEEe
Confidence 1111234456666665 78888999998887 532 1 3467899999 8888888999999998 578887766
Q ss_pred Ee-----CCCCccchhhHHHHHHHHHHhccccccCCCCceeccccCCccCCCCCCCcchhcccccccccccccHHHHHHh
Q 042619 307 LW-----KDGDQKNATKHNGWIRRLYDYMAPYASIFPRAAYVNYRDLDLGLNKKFNTSYTEASAWGTKYFKDNFNRLVRV 381 (402)
Q Consensus 307 ~w-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~Y~N~~d~~~~~~~~~~~~~~~~~~w~~~~~g~n~~rL~~i 381 (402)
.| .++. .+++..+|++.+.+.+.........|+|+||+|.+++ ..+|++.|||+||+||++|
T Consensus 394 ~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~g~Y~Nyad~~~~-----------~~~~~~~~yG~n~~RL~~i 460 (503)
T 1zr6_A 394 SIYDYENNTSP--YPESGFEFMQGFVATIEDTLPEDRKGKYFNYADTTLT-----------KEEAQKLYWRGNLEKLQAI 460 (503)
T ss_dssp EETTTTTCCTT--TTTSCHHHHHHHHHHHHTTSCGGGCBCCGGGCCTTCC-----------HHHHHHHHHGGGHHHHHHH
T ss_pred eeccccCCCcc--chHHHHHHHHHHHHHHHhhCCCCCCceeccCCCcccc-----------cchHHHHHHHhHHHHHHHH
Confidence 66 2221 2344566777666655433211123799999998743 1269999999999999999
Q ss_pred hhccCCCCCCcCCCCCCCC
Q 042619 382 KIKVDPDNIFRHEQSIPPV 400 (402)
Q Consensus 382 K~kyDP~~lF~~~~~i~~~ 400 (402)
|+||||+|||+++|+|+|.
T Consensus 461 K~kyDP~~vF~~~~~i~~~ 479 (503)
T 1zr6_A 461 KAKYDPEDVFGNVVSVEPI 479 (503)
T ss_dssp HHHHCTTCTTCCTTSCCCC
T ss_pred HHHhCchhhcCCCCCCCch
Confidence 9999999999999999875
No 9
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=100.00 E-value=1.6e-53 Score=437.19 Aligned_cols=371 Identities=26% Similarity=0.466 Sum_probs=270.1
Q ss_pred CCCCCceEEeCCCCEEEEcCCCCHHHHHHHHH-hcCCceeeccCCCCcccchhhhcCCCCCCcccccccccccEeEEEEE
Q 042619 1 LAKLRSIEVDINNKTAWVQAGATIGELYYRIS-EKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARIV 79 (402)
Q Consensus 1 l~~~~~i~~d~~~~~~~v~~G~~~~~l~~~l~-~~~~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~vv 79 (402)
|++||+|++|+++++|+||+|+++++|+++|. ++| +.+++|.|++|||||+++|||+|.++++||+.+|+|+++|||
T Consensus 106 l~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~evV 183 (521)
T 2ipi_A 106 MSQMRQVFYDSGKRAFAVEPGATLGETYRALYLDWG--VTIPAGVCPQVGVGGHVLGGGYGPLSRRDGVVADHLYAVEVV 183 (521)
T ss_dssp CTTCCCEEEETTTTEEEECTTSBHHHHHHHHHHHHS--BCCCCCSCTTCBHHHHTTTTCCCTTHHHHCCGGGGEEEEEEE
T ss_pred cccCCCeEEeCCCCEEEEeCCcCHHHHHHHHHHhcC--ceeCCCCCCCcccCCcccCCCCCccccccccHhhcEEEEEEE
Confidence 67899999999999999999999999999997 677 667899999999999999999999999999999999999999
Q ss_pred cCC--CcEE--e-ccC-CCCC--hHHHHhhcCCCCceEEEEEEEEe-----------eecCc-eEEEEEEEecch----h
Q 042619 80 DAR--GRIL--D-REA-MGED--LFWAIRGGGGGSFGIILAWKVKL-----------VPVPA-TVTVFTVSKTLE----Q 135 (402)
Q Consensus 80 ~~d--G~~~--~-~~~-~~~d--Lf~a~~G~g~g~~Gvvt~~~~~~-----------~~~~~-~~~~~~~~~~~~----~ 135 (402)
++| |+++ + +.. +++| ||||+|||++|+|||||+++||+ +|.|+ .+..+.+.|... +
T Consensus 184 ~~d~~G~i~~~~~~~~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 263 (521)
T 2ipi_A 184 VVDASGRARKVVATSAADDPNRELWWAHTGGGGGNFGIVTRYWFRTPGATGTDPSQLLPKAPTSTLRHIVTWDWSALTEE 263 (521)
T ss_dssp EECTTSCEEEEEEECCTTCTTHHHHHHTTTSCSSSSCEEEEEEECCSSCCSSCGGGSSCBCCSCEEEEEEEEESTTCCHH
T ss_pred EecCCccEEEEecccccCCCCHHHHHHHhcCCCCceEEEEEEEEEeecccCCCcccccCCCCceEEEEEEEecccccCHH
Confidence 977 9974 2 332 5565 99999997668999999999999 88875 344455555431 2
Q ss_pred hHHHHHHHHHHHHhh--cccc----ceeeEEEeeccCCCCCCceeEEEEEEEEecChHHHHHHHhhh---ccC-CC-CCc
Q 042619 136 GATKILYKWQQVADK--LDED----LFIRVIIKLANAGPKGKRTVTTSYNALFLGDSERLLQVMHMW---FPE-LG-LTR 204 (402)
Q Consensus 136 ~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~l~~~---~~~-~~-~~~ 204 (402)
.+.++++.|+++... .|++ +...+.+... ..+ .+.+...|.|+.++..+.+++. +.+ ++ +..
T Consensus 264 ~~~~~l~~~~~~~~~~~~p~~~~~~l~~~~~~~~~---~~~----~~~~~~~~~g~~~~~~~~l~~~~~~l~~~~g~~~~ 336 (521)
T 2ipi_A 264 AFTRIIDNHGAWHQSNSAAGTPYASMHSVFYLNSR---AAG----QILLDIQIDGGLDGAEALLNDFVAAVNEGTGVEPA 336 (521)
T ss_dssp HHHHHHHHHHHHHHHSCSSSSGGGGCEEEEEEECT---TSC----EEEEEEEEETTSTTHHHHHHHHHHHHTTTCSSCCE
T ss_pred HHHHHHHHHHHHHHhccCCCccccceEEEEEeccC---CCC----ceEEEEEeccCHHHHHHHHHHHHHHHHhhcCCCcc
Confidence 345778888887754 4443 3333322211 111 2344556788766655544432 222 23 223
Q ss_pred CcccccchHHHHHHhhccCCCCchhhhhhhhhcccccccccccccCCCCCHHHHHHHHHHHhcCC--CcEEEEeeCCCCC
Q 042619 205 NDCIETSWIRSVLYIADFQNNTEPEILLEAEFLFKNYFKAKSDFVKEPIPESVLEGLWKMLLEED--NPVMIWNPYGGMM 282 (402)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~Gg~~ 282 (402)
..+..++|.+........ + . . . .+++.++.++.+.++.+.+..+++.+.+.+ .+.+.++++||++
T Consensus 337 ~~~~~~~~~~~~~~~~~~----~-~---~----~-~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~GG~v 403 (521)
T 2ipi_A 337 VQRSTEPWLRATLANKFD----T-G---G----F-DRTKSKGAYLRKPWTAAQAATLYRHLSADSQVWGEVSLYSYGGKV 403 (521)
T ss_dssp EEEEEECHHHHHTCCCCC----C-T---T----C-CEEEEEEEEESSCCCHHHHHHHHHHHHSCCSSEEEEEEEECCGGG
T ss_pred ceeeecCHHHHHHhhcCC----C-C---C----C-ccceeeccccccCCCHHHHHHHHHHHHhCCCCceEEEEEecCCcc
Confidence 445567887754322110 0 0 0 0 122335555655678888999999887653 3567889999999
Q ss_pred CCCCCCCCCCccccCceEEEEEEEEeCCCCccchhhHHHHHHHHHHhccccccC------CCCceeccccCCccCCCCCC
Q 042619 283 SKISEYEIPFPHRKGNIFKIQYLTLWKDGDQKNATKHNGWIRRLYDYMAPYASI------FPRAAYVNYRDLDLGLNKKF 356 (402)
Q Consensus 283 ~~~~~~~ta~~~R~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~Y~N~~d~~~~~~~~~ 356 (402)
++++.++++|+||+ ..+++++...|.++. .+++..+|++++.+.+.+.... ...|+|+||+|.+++.++-
T Consensus 404 ~~~~~~~ta~~~R~-~~~~~~~~~~w~~~~--~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~g~Y~Ny~d~~~~~~~~- 479 (521)
T 2ipi_A 404 NSVPETATATAQRD-SIIKVWMSATWMDPA--HDDANLAWIREIYREIFATTGGVPVPDDRTEGTFINYPDVDLVDERW- 479 (521)
T ss_dssp GGSCTTTSSCCCCS-CSEEEEEEEEESCGG--GHHHHHHHHHHHHHHHTTTTTSSCCSSSSBCCCCTTSCCGGGGCTTT-
T ss_pred cCCCCccccccccc-hhhhcceeEecCCCC--chHHHHHHHHHHHHHHHhhhcCCCcccCCCCceEeCCCCcccccccc-
Confidence 99988999999999 689999999998653 4567789999998888732211 1357999999988641100
Q ss_pred CcchhcccccccccccccHHHHHHhhhccCCCCCCcCCCCCCCC
Q 042619 357 NTSYTEASAWGTKYFKDNFNRLVRVKIKVDPDNIFRHEQSIPPV 400 (402)
Q Consensus 357 ~~~~~~~~~w~~~~~g~n~~rL~~iK~kyDP~~lF~~~~~i~~~ 400 (402)
+.++ ..|++.|||+||+||++||+||||+|||++.|+|+|+
T Consensus 480 ~~~~---~~~~~~y~g~n~~RL~~iK~kyDP~~vF~~~qsI~p~ 520 (521)
T 2ipi_A 480 NTSG---VPWYTLYYKGNYPRLQKVKARWDPRDVFRHALSVRPP 520 (521)
T ss_dssp SCCS---CCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred ccch---hhHHHhhhhhHHHHHHHHHHHhCCcCEecCCCCCCCC
Confidence 1111 2499999999999999999999999999999999985
No 10
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=7.8e-52 Score=419.41 Aligned_cols=361 Identities=20% Similarity=0.289 Sum_probs=264.3
Q ss_pred CCCCCceEEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccccccccEeEEEEEc
Q 042619 1 LAKLRSIEVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARIVD 80 (402)
Q Consensus 1 l~~~~~i~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~vv~ 80 (402)
|++||+|++|+++.+|+||||+++++|+++|.++| +.+++|.|+++||||+++|||+|.++++||+.+|+|+++|||+
T Consensus 88 l~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~G--l~~~~g~~~~~gi~G~~~gGg~g~~~~~~G~~~d~v~~~~vV~ 165 (459)
T 2bvf_A 88 LRLMNSIHIDTAGSRARIGGGVISGDLVKEAAKFG--LAAVTGMHPKVGFCGLALNGGVGFLTPKYGLASDNILGATLVT 165 (459)
T ss_dssp CTTCCCEEEETTTTEEEEETTCBHHHHHHHHHTTT--EEECCCSCTTSBHHHHHTTCCCCTTHHHHCCGGGGEEEEEEEC
T ss_pred CCCCCCEEECCCCCEEEECCCCCHHHHHHHHHHcC--CEecCCCCCCcccceeecCCCCccccccccCHhHhEEEEEEEc
Confidence 67899999999999999999999999999999987 7788899999999999999999999999999999999999999
Q ss_pred CCCcEEe-ccCCCCChHHHHhhcCCCCceEEEEEEEEeeecCceEEEEEEEecchhhHH--HHHHHHHHHHhhcccccee
Q 042619 81 ARGRILD-REAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTLEQGAT--KILYKWQQVADKLDEDLFI 157 (402)
Q Consensus 81 ~dG~~~~-~~~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 157 (402)
+||++++ +..+|+|||||+|||+ |+|||||+++||++|.|+......+.|... ++. ++++.|+++....|+.+..
T Consensus 166 ~~G~i~~~~~~~~~dLf~a~rg~~-g~~GiVt~~~l~l~p~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 243 (459)
T 2bvf_A 166 ATGDVIYCSDDERPELFWAVRGAG-PNFGVVTEVEVQLYELPRKMLAGFITWAPS-VSELAGLLTSLLDALNEMADHIYP 243 (459)
T ss_dssp TTSCEEEEESSSSHHHHHHHHHHG-GGTCEEEEEEEEEEECCCCEEEEEEEECCC-HHHHHHHHHHHHHHHHHTTTTCCC
T ss_pred CCCeEEEeCCCCChhhHhHhhccC-CccEEEEEEEEEEEECCCcEEEEEEEechH-HhhHHHHHHHHHHHHHhCcHhhcc
Confidence 9999997 6677899999999987 899999999999999976665555556542 334 7788888888777776643
Q ss_pred eEEEeeccCCCCCCceeEEEEEEEEecChHHHHHHHhhhccCCC-CCcCcccccchHHHHHHhhccCCCCchhhhhhhhh
Q 042619 158 RVIIKLANAGPKGKRTVTTSYNALFLGDSERLLQVMHMWFPELG-LTRNDCIETSWIRSVLYIADFQNNTEPEILLEAEF 236 (402)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (402)
.+ .... ...+. ..+.+...|.|+.++..+.+++. .+++ +....+..++|.+.... .. . ....+.
T Consensus 244 ~~-~~~~--~~~~~--~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~-------~-~~~~~~ 308 (459)
T 2bvf_A 244 SV-FVGV--DENRA--PSVTVCVGHLGGLDIAERDIARL-RGLGRTVSDSIAVRSYDEVVAL-NA-------E-VGSFED 308 (459)
T ss_dssp EE-EEEE--CTTCC--EEEEEEEECCSCHHHHHHHHHHH-HTTSCCSEECCEEECHHHHHHH-HH-------H-HSCCCC
T ss_pred cc-ccCc--ccCCC--ceEEEEEEEeCCHHHHHHHHHHH-HHhCcchhcceeecCHHHHHhc-cc-------c-cccCCC
Confidence 33 2111 11122 23455667889887766666543 3443 22344556677763322 10 0 000000
Q ss_pred cccccccc-cccccCCCCCHHHHHHHHHHHhcCC-Cc-EEEEeeCCCCCCCCCCCCCCCccccCceEEEEEEEEeCCCCc
Q 042619 237 LFKNYFKA-KSDFVKEPIPESVLEGLWKMLLEED-NP-VMIWNPYGGMMSKISEYEIPFPHRKGNIFKIQYLTLWKDGDQ 313 (402)
Q Consensus 237 ~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~-~~-~~~~~~~Gg~~~~~~~~~ta~~~R~~~~~~~~~~~~w~~~~~ 313 (402)
.. ..+.. ++.++++.++.+.++.+++.+.+.+ .. ...++.+||++.+ .+.+||+||+. .| +.+...|.++..
T Consensus 309 ~~-~~~~~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~--~~~ta~~~R~~-~~-~~~~~~w~~~~~ 383 (459)
T 2bvf_A 309 GM-SNLWIDREIAMPNARFAEAIAGNLDKFVSEPASGGSVKLEIEGMPFGN--PKRTPARHRDA-MG-VLALAEWSGAAP 383 (459)
T ss_dssp SC-EEEEEEEEECSCHHHHHHHHHTTGGGCEEETTTTEEEEEEEECCCCCC--TTCCSSCCCSS-CE-EEEEEEECTTST
T ss_pred CC-cceEeccccccCCCCCHHHHHHHHHHHhhCCCCCceeEEEEeCCccCC--CCCCCcccCCc-ce-EEEEEEeCCCcc
Confidence 11 11221 3444442344556666666554433 22 3344555887766 66799999994 67 888889986641
Q ss_pred cchhhHHHHHHHHHHhccccccCCCCceeccccCCccCCCCCCCcchhccccccccccccc-HHHHHHhhhccCCCCCCc
Q 042619 314 KNATKHNGWIRRLYDYMAPYASIFPRAAYVNYRDLDLGLNKKFNTSYTEASAWGTKYFKDN-FNRLVRVKIKVDPDNIFR 392 (402)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~Y~N~~d~~~~~~~~~~~~~~~~~~w~~~~~g~n-~~rL~~iK~kyDP~~lF~ 392 (402)
.+++..+|++.+.+.+.|+......|+|+||+|.+. ..|.+.|||+| |+||++||+||||+|+|+
T Consensus 384 -~~~~~~~~~~~~~~~l~~~~~~p~~g~Y~N~~d~~~-------------~~~~~~~yG~~n~~rL~~iK~kyDP~~vF~ 449 (459)
T 2bvf_A 384 -GSEKYPELARELDAALLRAGVTTSGFGLLNNNSEVT-------------AEMVAEVYKPEVYSRLAAVKREYDPENRFR 449 (459)
T ss_dssp -TTTHHHHHHHHHHHHHHHTTCEEEEECCGGGCSSCC-------------HHHHHHHHCHHHHHHHHHHHHHHCTTCCCC
T ss_pred -chHHHHHHHHHHHHHhcccccCCCCCeeeCCCCCcc-------------hHHHHHHhCcchHHHHHHHHHHhCcccccC
Confidence 245678999999999998842112489999999862 26899999987 999999999999999999
Q ss_pred CCCCCCC
Q 042619 393 HEQSIPP 399 (402)
Q Consensus 393 ~~~~i~~ 399 (402)
++|+|+|
T Consensus 450 ~~~~I~p 456 (459)
T 2bvf_A 450 HNYNIDP 456 (459)
T ss_dssp SSSCCCC
T ss_pred CCCCCCC
Confidence 9999987
No 11
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=99.97 E-value=3.9e-30 Score=264.87 Aligned_cols=138 Identities=17% Similarity=0.241 Sum_probs=117.7
Q ss_pred CCCCCce------EEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeecc-CCCCcccchhhhcCCCCCCcccccccccccE
Q 042619 1 LAKLRSI------EVDINNKTAWVQAGATIGELYYRISEKSNIHGFAA-GLCPSVGIGGHITGGGYGTMMRKYGLAADNV 73 (402)
Q Consensus 1 l~~~~~i------~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~-g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v 73 (402)
|++||+| ++|+++.+++||||+++.+|.+++.++| +.++. +.+.+++|||++.++|+|..+++||..+|+|
T Consensus 121 l~~m~~i~~~~~~~~d~~~~~v~v~aGv~~~~l~~~~~~~G--l~~~~~~~~~~~tvGG~v~~~g~g~~~~~yG~~~d~v 198 (534)
T 1w1o_A 121 MASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARG--VAPRSWTDYLYLTVGGTLSNAGISGQAFRHGPQISNV 198 (534)
T ss_dssp GGGGGCSSSSCSEEECTTSSEEEEETTCBHHHHHHHHHTTT--EEESCCCSSCCSBHHHHHTTCCCSTTHHHHCCGGGSE
T ss_pred CccccccccCccEEEcCCCCEEEECCCcCHHHHHHHHHHCC--CcccCCCCCCCEEeceeccCCCccccccccccHhhhE
Confidence 4678874 7898899999999999999999999988 44443 3446788999999999999999999999999
Q ss_pred eEEEEEcCCCcEEe-ccCCCCChHHHHhhcCCCCceEEEEEEEEeeecCceEEEEEEEecchhhHHHHH
Q 042619 74 VDARIVDARGRILD-REAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTLEQGATKIL 141 (402)
Q Consensus 74 ~~~~vv~~dG~~~~-~~~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (402)
+++|||++||++++ +..+|+||||++||++ |+|||||++++|++|.|+....+.+.|....++.+.+
T Consensus 199 ~~~evV~~dG~v~~~~~~~~~dL~~~~rGs~-G~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~ 266 (534)
T 1w1o_A 199 LEMDVITGHGEMVTCSKQLNADLFDAVLGGL-GQFGVITRARIAVEPAPARARWVRFVYTDFAAFSADQ 266 (534)
T ss_dssp EEEEEEETTSCEEEEESSSSHHHHHHHTTCT-TCSEEEEEEEEEEEECCSEEEEEEEEESCHHHHHHHH
T ss_pred EEEEEEeCCccEEEECCCCChhhHhhhcCCC-CCcEEEEEEEEEEEECCcceEEEEEEeCCHHHHHHHH
Confidence 99999999999997 6678899999999987 8999999999999999997766666666544443333
No 12
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=99.94 E-value=1.1e-24 Score=223.52 Aligned_cols=142 Identities=23% Similarity=0.308 Sum_probs=116.8
Q ss_pred CCCCCceEEeC-----CC--CEEEEcCCCCHHHHHHH-HHhcCCceeec-cCCCCcccchhhhcCCCCCCcccccccccc
Q 042619 1 LAKLRSIEVDI-----NN--KTAWVQAGATIGELYYR-ISEKSNIHGFA-AGLCPSVGIGGHITGGGYGTMMRKYGLAAD 71 (402)
Q Consensus 1 l~~~~~i~~d~-----~~--~~~~v~~G~~~~~l~~~-l~~~~~~~~~~-~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d 71 (402)
|++||+|+||. +. .+++||||+++.++.++ +.++| +..+ .+.++.++|||++.++|.|..+.+||..+|
T Consensus 112 l~~m~~i~i~~~~~~~~~~~~~v~v~aGv~~~~l~~~~l~~~G--l~~~~~~s~~~~tiGG~va~ng~G~~~~~yG~~~d 189 (524)
T 2exr_A 112 MSTTAENHFEVGYLSGGDATAFVDVSGGALWEDVLKRCVSEYG--LAPRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTS 189 (524)
T ss_dssp GGGGTTSCEEEEECCSSSSSEEEEEETTCBHHHHHHHHHHHHS--EECSCCCSCCSSBHHHHHTTCCCCTTHHHHCCGGG
T ss_pred CcCCCCcEEeecccCCCCCceEEEEeCCcCHHHHHHHHHHHcC--CCCCCCCcCCceeecccCCCCCCcccccccCcHhh
Confidence 46799987776 55 89999999999998655 55887 4332 334467889999999999999999999999
Q ss_pred cEeEEEEEcCCCcEEe-ccCCCCChHHHHhhcCCCCceEEEEEEEEeeecCceEEEEEEEecchhhHHHHHHHHH
Q 042619 72 NVVDARIVDARGRILD-REAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTLEQGATKILYKWQ 145 (402)
Q Consensus 72 ~v~~~~vv~~dG~~~~-~~~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (402)
+|++++||++||++++ +..+|+||||+++|+. |+|||||++++|++|.|+....+.+.|....++.+.+..+.
T Consensus 190 ~V~~l~vV~~dG~v~~~~~~~~~dL~~~~~Gs~-GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~~~~~~~~l~ 263 (524)
T 2exr_A 190 NVTELDVVTGNGDVVTCSEIENSELFFSVLGGL-GQFGIITRARVLLQPAPDMVRWIRVVYTEFDEFTQDAEWLV 263 (524)
T ss_dssp SEEEEEEEETTSCEEEEESSSSHHHHHHHTTCT-TSSEEEEEEEEEEEECCSEEEEEEEEESCHHHHHHHHHHHH
T ss_pred hEEEEEEEecCCeEEEECCCCChhHHhHhhcCC-CccEEEEEEEEEEEEcCCeeEEEEEEeCCHHHHHHHHHHHH
Confidence 9999999999999997 5567899999999886 89999999999999999987766677765555555554443
No 13
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=99.92 E-value=5e-24 Score=215.71 Aligned_cols=145 Identities=31% Similarity=0.411 Sum_probs=123.7
Q ss_pred CCCCCce-EEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccccccccEeEEEEE
Q 042619 1 LAKLRSI-EVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARIV 79 (402)
Q Consensus 1 l~~~~~i-~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~vv 79 (402)
|++||+| ++|+++.+++||||+++.+|.++|.++|..+++..+++..++|||++.++++|..+.+||..+|+|++++||
T Consensus 102 l~~m~~i~~id~~~~~v~V~aGv~~~~l~~~l~~~Gl~~~~~~~s~~~~tvGG~ia~nagG~~~~~yG~~~d~V~~levV 181 (476)
T 3pm9_A 102 LKRMDKIREIDTSSNTITVEAGAILQRVQEKAAEVDRLFPLSLGAQGSCTIGGNLSTNAGGTAALAYGLARDMALGVEVV 181 (476)
T ss_dssp CTTCCCEEEEETTTTEEEEETTCBHHHHHHHHHHTTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEE
T ss_pred eeCCCceEEEcCCCCeEEECCCcCHHHHHHHHHHhCCccCCCCCCCCcEEEccccCCCCCCCcccccCcHHHheeEEEEE
Confidence 6789999 799999999999999999999999999843333346666789999999999999999999999999999999
Q ss_pred cCCCcEEe-c-----cCCCCChHHHHhhcCCCCceEEEEEEEEeeecCceEEEEEEEecchhhHHHHHHHHHH
Q 042619 80 DARGRILD-R-----EAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTLEQGATKILYKWQQ 146 (402)
Q Consensus 80 ~~dG~~~~-~-----~~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (402)
++||++++ + +..++||+|+++|+. |+|||||++++|++|.|+......+.|...+++.+++..+++
T Consensus 182 ~~dG~v~~~~~~~~k~~~g~dl~~l~~Gs~-GtlGIIt~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~~ 253 (476)
T 3pm9_A 182 LADGRVMNLLSKLKKDNTGYDLRDLFIGAE-GTLGIITAATLKLFPKPRAVETAFVGLQSPDDALKLLGIAQG 253 (476)
T ss_dssp CTTSCEEECCCCCSCCCSSCCCHHHHTTST-TSSCEEEEEEEECEECCSEEEEEEEEESCHHHHHHHHHHHHH
T ss_pred ccCCeEEEcCCcccCCCCCcCHHHHhccCC-CCcEEEEEEEEEEeecCceeEEEEEEcCCHHHHHHHHHHHHH
Confidence 99999996 2 234689999999876 899999999999999999877777777765666666655554
No 14
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=99.90 E-value=6.6e-24 Score=223.13 Aligned_cols=144 Identities=28% Similarity=0.337 Sum_probs=125.7
Q ss_pred CCCCCce-EEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccccccccEeEEEEE
Q 042619 1 LAKLRSI-EVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARIV 79 (402)
Q Consensus 1 l~~~~~i-~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~vv 79 (402)
|++||+| +||+++++++|||||++.+|.++|.++|+.+++.+++...++|||+++++++|..+.+||..+|+|+++|||
T Consensus 260 lsrMnrIleiD~~~~~atVeaGv~~~~L~~~L~~~Gl~lp~dP~S~~~aTIGG~iAtna~G~~s~rYG~~~d~VlgleVV 339 (658)
T 4bby_A 260 TSQMNRILWVDENNLTAHVEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWISTRASGMKKNIYGNIEDLVVHMKVV 339 (658)
T ss_dssp CTTCCCEEEEETTTTEEEEETTCBHHHHHHHHHHHTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEE
T ss_pred CccCCCcEEEcCCCCEEEEecCchHHHHHHHHHHcCCccCCCCCCccccEEeehhhcCCCCCCccCcCCHHHheeeEEEE
Confidence 6899998 899999999999999999999999999965555567777889999999999999999999999999999999
Q ss_pred cCCCcEEe-----ccCCCCChHHHHhhcCCCCceEEEEEEEEeeecCceEEEEEEEecchhhHHHHHHHHH
Q 042619 80 DARGRILD-----REAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTLEQGATKILYKWQ 145 (402)
Q Consensus 80 ~~dG~~~~-----~~~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (402)
|+||++++ ....++||+|+++|+. |+|||||++++|++|.|+....+.+.|...+++.+++..+.
T Consensus 340 lpdG~i~~~~~~~k~~aGyDL~~L~iGSE-GTLGIITeatLrL~P~P~~~~~~~~~f~d~~~a~~av~~i~ 409 (658)
T 4bby_A 340 TPRGVIEKSCQGPRMSTGPDIHHFIMGSE-GTLGVITEATIKIRPTPEYQKYGSVAFPNFEQGVACLREIA 409 (658)
T ss_dssp ETTEEEECSCCCSSCCSSSCTHHHHTTCT-TSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHHH
T ss_pred eCCCcccccccccccCCCcCHHHHhccCC-CcCcceeeeeeeeccCCccccccccccCCchhhhhhHHHHH
Confidence 99999985 2345689999999876 99999999999999999988777777776556555555443
No 15
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=99.87 E-value=2.6e-22 Score=207.64 Aligned_cols=142 Identities=23% Similarity=0.272 Sum_probs=118.6
Q ss_pred CCCCCce-EEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeeccCC--CCcccchhhhcCCCCCCcccccccccccEeEEE
Q 042619 1 LAKLRSI-EVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGL--CPSVGIGGHITGGGYGTMMRKYGLAADNVVDAR 77 (402)
Q Consensus 1 l~~~~~i-~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~g~--~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~ 77 (402)
|++||+| ++|+++.+++||||+++.+|.++|.++| +.++... ...++|||+++++++|..+.+||..+|+|+++|
T Consensus 191 l~~mn~I~~id~~~~~v~v~aGv~~~~l~~~l~~~G--l~~~~~p~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~le 268 (584)
T 2uuu_A 191 MRRMNKVLWVDRREMTACIQVGIMGPELEKQLHKQG--VSLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFR 268 (584)
T ss_dssp CTTCCCEEEEETTTTEEEEETTCBHHHHHHHHHHTT--EECCCCCTTGGGCBHHHHHHHTCCCTTHHHHCCHHHHEEEEE
T ss_pred CCCCCccEEEcCCCCEEEECCCCcHHHHHHHHHHcC--CeeCcCCCccCCeeEeeeccCCCCcccccCcCcHHHheeeEE
Confidence 5799999 8999999999999999999999999998 4444333 345789999999999999999999999999999
Q ss_pred EEcCCCcEEe----ccCCCCChHHHHhhcCCCCceEEEEEEEEeeecCceEEEEEEEecchhhHHHHHHHHH
Q 042619 78 IVDARGRILD----REAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTLEQGATKILYKWQ 145 (402)
Q Consensus 78 vv~~dG~~~~----~~~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (402)
||++||++++ +...++||+|+++|+. |+|||||+++||++|.|+....+.+.|....++.+++..+.
T Consensus 269 vVl~dG~i~~~~~~~~~~g~dl~~~~~Gse-GtlGIIT~~tlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 339 (584)
T 2uuu_A 269 TVTPTGTLELRNGARSGAGINYKHIILGSE-GTLGIITEAVMKVHAVPQAVEYYGFLFPTFAHAVSALQQIR 339 (584)
T ss_dssp EEETTEEECCC-------CCCTHHHHTTCT-TSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHHH
T ss_pred EEeCCCCEEECCccccCCCcchhhhhccCC-CCcEEEEEEEEEEEecccceEEEEEEcCCHHHHHHHHHHHH
Confidence 9999999885 3456899999999886 89999999999999999977777777765445545444443
No 16
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=99.87 E-value=1e-21 Score=198.95 Aligned_cols=140 Identities=20% Similarity=0.284 Sum_probs=116.7
Q ss_pred CCCCCce-EEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeec-cCCCCcccchhhhcCCCCCCcccccccccccEeEEEE
Q 042619 1 LAKLRSI-EVDINNKTAWVQAGATIGELYYRISEKSNIHGFA-AGLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARI 78 (402)
Q Consensus 1 l~~~~~i-~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~-~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~v 78 (402)
|++||+| ++|+++++|+||||+++.+|.++|.++|. .++ .+..+.++|||.+.+|++|..++.||..+|+|++++|
T Consensus 94 l~~l~~i~~~d~~~~~v~v~aGv~l~~L~~~l~~~Gl--~l~~~~g~~~~tvGGaia~~a~G~~~~~~G~~~d~V~~~ev 171 (481)
T 4feh_A 94 MTPLNTIHSIDADTKLVDIDAGVNLDQLMKAALPFGL--WVPVLPGTRQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDL 171 (481)
T ss_dssp CTTCCCEEEEETTTTEEEEETTCBHHHHHHHHGGGTE--ECSCCCSCSCCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEE
T ss_pred CccCCCceEEcCCCCEEEEcCCccHHHHHHHHHHcCC--EEEEeCCcCccccCCccccccCCCCcccCCCccceEeEEEE
Confidence 6789999 89999999999999999999999999984 443 2334567899999999999999999999999999999
Q ss_pred EcCCCcEEe-ccC-CCCChHHHHhhcCCCCceEEEEEEEEeeecCceEEEE-EEEecchhhHHHHHHHHHH
Q 042619 79 VDARGRILD-REA-MGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVF-TVSKTLEQGATKILYKWQQ 146 (402)
Q Consensus 79 v~~dG~~~~-~~~-~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 146 (402)
|++||++++ +.. +|+|||||+||+. |+|||||++++|++|.++..... ...+. +..++++.+.+
T Consensus 172 V~~dG~v~~~s~~~~~~dLf~a~rgs~-G~~GIIt~~tl~l~p~~~~~~~~~~~~~~---~l~~~~~~~~~ 238 (481)
T 4feh_A 172 LTADGEIRHLTPTGEDAELFWATVGGN-GLTGIIMRATIEMTPTSTAYFIADGDVTA---SLDETIALHSD 238 (481)
T ss_dssp ECTTSCEEEECSSSTTHHHHHHHTTCT-TTTCEEEEEEEECEECSCSEEEEEEEECS---SHHHHHHHHSS
T ss_pred EeCCCCEEEeCCCCCChHHHHHhhccC-CCceEEEEEEEEEEeCCccEEEEEEEeCC---CHHHHHHHHHH
Confidence 999999997 666 7899999999987 89999999999999998654332 22322 34455555543
No 17
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.86 E-value=2.4e-21 Score=176.06 Aligned_cols=116 Identities=20% Similarity=0.234 Sum_probs=99.9
Q ss_pred eEEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeecc--CCCCcccchhhhcCCCCCCcccccccccccEeEEEEEcCCCc
Q 042619 7 IEVDINNKTAWVQAGATIGELYYRISEKSNIHGFAA--GLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARIVDARGR 84 (402)
Q Consensus 7 i~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~--g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~vv~~dG~ 84 (402)
|++|+++++++||+|+++.+|+++|.++|. .++. |+++. +|||++.+|++| ++||.. |+|++++||++||+
T Consensus 1 l~vd~~~~~v~V~aGv~l~~L~~~l~~~Gl--~~~~~Pg~~~~-tVGG~v~~nagG---~~yG~~-D~V~~vevV~~dG~ 73 (219)
T 2yvs_A 1 MEVHAADQYLVAPGEADLLEVHARLAGTGL--FPPFPPVELPG-GVGGLVARGGFA---QTFFFP-AEVLGLTFRTPKGR 73 (219)
T ss_dssp CEEETTTTEEEEETTCCHHHHHHHHTTTTE--ECSSCSEECTT-HHHHHHHTTCSS---BSSCGG-GGEEEEEEECTTSC
T ss_pred CeEcCCCCEEEEcCCCcHHHHHHHHHHcCC--EEeccCCCCCC-chhheeccCccc---ccCCCc-cEEEEEEEEeCCCC
Confidence 578999999999999999999999999884 4443 55565 899999999999 999999 99999999999999
Q ss_pred EEe-cc-----CCCCChHHHHhhcCCCCceEEEEEEEEeeecCceEEEEEEE
Q 042619 85 ILD-RE-----AMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVS 130 (402)
Q Consensus 85 ~~~-~~-----~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~~~~~~~~~~~ 130 (402)
+++ +. ..++||||+++|++ |+|||||+++||++|.++....+.+.
T Consensus 74 i~~~~~~~~kn~~gydl~~~~~Gs~-G~lGIVt~~tlrl~p~~~~~~~~~~~ 124 (219)
T 2yvs_A 74 RVRAGGVVVKNVQGYDLVRLFVGSF-GLLGRAEEVVLRLRPGRAQAFLRRPF 124 (219)
T ss_dssp EEEEECSSCSSSSCSCHHHHHTTCT-TTTCEEEEEEEECEECSEEEEEEEEC
T ss_pred EEEECCccccCCCCcchHHHhccCC-CceEEEEEEEEEEEECCcccEEEEEe
Confidence 996 32 24589999999886 89999999999999999876554443
No 18
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=99.85 E-value=1.2e-20 Score=193.69 Aligned_cols=144 Identities=23% Similarity=0.290 Sum_probs=119.1
Q ss_pred CCCCCce-EEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeeccC---CCCcccchhhhcCCCCCCcccccccccccEeEE
Q 042619 1 LAKLRSI-EVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAG---LCPSVGIGGHITGGGYGTMMRKYGLAADNVVDA 76 (402)
Q Consensus 1 l~~~~~i-~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~g---~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~ 76 (402)
|++||+| ++|+++.+++||||+++.+|+++|.++|.. ++.+ ....+||||+++++|.|.. +||..+|+|+++
T Consensus 109 l~~m~~i~~id~~~~~v~v~aGv~~~~l~~~l~~~Gl~--~~~~~~p~~~~~~igG~~~~~g~g~~--~yG~~~d~v~~~ 184 (520)
T 1wvf_A 109 LKKMNKIIKIDPEMCYALVEPGVTFGQMYDYIQENNLP--VMLSFSAPSAIAGPVGNTMDRGVGYT--PYGEHFMMQCGM 184 (520)
T ss_dssp CTTCCCEEEEETTTTEEEECTTCCHHHHHHHHHHTTCS--EECCCCSSCTTCCHHHHHHTTCBCSS--TTCBGGGGEEEE
T ss_pred CCCCCceEEECCCCCEEEECCCCCHHHHHHHHHHcCCc--ccCCCCCCCCeeeeeecccCCCcCCc--cccchhhcEeee
Confidence 6789999 999999999999999999999999999854 4433 3336889999999998886 999999999999
Q ss_pred EEEcCCCcEEe-c--cCCCCChHHHHhhcCC---------CCceEEEEEEEEeeecCceEEEEEEEecchhhHHHHHHHH
Q 042619 77 RIVDARGRILD-R--EAMGEDLFWAIRGGGG---------GSFGIILAWKVKLVPVPATVTVFTVSKTLEQGATKILYKW 144 (402)
Q Consensus 77 ~vv~~dG~~~~-~--~~~~~dLf~a~~G~g~---------g~~Gvvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (402)
|||++||++++ + ..+++|||++.+|+.| ++|||||++++|++|.|+....+.+.|+..+++.++++.+
T Consensus 185 evV~~dG~v~~~~~~~~~~~~l~~~~~~~~Gy~l~~l~~g~~lGiVt~~~l~l~p~p~~~~~~~~~f~~~~~~~~~~~~~ 264 (520)
T 1wvf_A 185 EVVLANGDVYRTGMGGVPGSNTWQIFKWGYGPTLDGMFTQANYGICTKMGFWLMPKPPVFKPFEVIFEDEADIVEIVDAL 264 (520)
T ss_dssp EEECTTSCEEECGGGGSTTCSCTTTCSCCSSCCCHHHHTTSSSCEEEEEEEECEECCSEEEEEEEEECCGGGHHHHHHHH
T ss_pred EEEcCCCcEEEeCCCcCCCchhHhhhcCCCCcchhhhccCCceEEEEEEEEEEEecCCeEEEEEEEeCCHHHHHHHHHHH
Confidence 99999999997 3 2467898777776642 5999999999999999998777777777656666666566
Q ss_pred HHHH
Q 042619 145 QQVA 148 (402)
Q Consensus 145 ~~~~ 148 (402)
+++.
T Consensus 265 ~~~~ 268 (520)
T 1wvf_A 265 RPLR 268 (520)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6544
No 19
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=99.83 E-value=1.7e-20 Score=187.73 Aligned_cols=120 Identities=22% Similarity=0.299 Sum_probs=107.1
Q ss_pred CCCCCce-EEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeec-cCCCCcccchhhhcCCCCCCcccccccccccEeEEEE
Q 042619 1 LAKLRSI-EVDINNKTAWVQAGATIGELYYRISEKSNIHGFA-AGLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARI 78 (402)
Q Consensus 1 l~~~~~i-~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~-~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~v 78 (402)
|++||+| ++|+++++++||||+++.+|.++|.++|. .++ .+.++.++|||.+++|+||.. .+||..+|+|++++|
T Consensus 67 l~~l~~i~~~d~~~~~v~v~aG~~l~~l~~~l~~~Gl--~l~~~~~~~~~tvGG~i~~~~~G~~-~~~G~~~d~v~~~~v 143 (422)
T 2vfr_A 67 LAGLPSVVDVDTAARTVRVGGGVRYAELARVVHARGL--ALPNMASLPHISVAGSVATGTHGSG-VGNGSLASVVREVEL 143 (422)
T ss_dssp STTSCCCEEEETTTTEEEEETTCBHHHHHHHHHHTTE--ECSCCCSSSCSBHHHHHHHTCCCCC-TTCCCGGGGEEEEEE
T ss_pred hhhCCCcEEEcCCCCEEEEcCCCCHHHHHHHHHHcCC--cccCCCCCCCeeHHHHHhcCCCCCC-cccCcHHHheEEEEE
Confidence 5789998 89999999999999999999999999984 455 577888999999999999976 699999999999999
Q ss_pred EcCCCcEEe-ccCCCCChHHHHhhcCCCCceEEEEEEEEeeecCceEEE
Q 042619 79 VDARGRILD-REAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTV 126 (402)
Q Consensus 79 v~~dG~~~~-~~~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~~~~~~~ 126 (402)
|++||++++ +..+|+ ||+++|+. |++||||++++|++|.|+....
T Consensus 144 v~~~G~~~~~~~~~~~--f~~~~g~~-G~lGvit~~~l~l~p~~~~~~~ 189 (422)
T 2vfr_A 144 VTADGSTVVIARGDER--FGGAVTSL-GALGVVTSLTLDLEPAYEMEQH 189 (422)
T ss_dssp ECTTSCEEEEETTSTT--GGGTSSCT-TTTCEEEEEEEECEECCEEEEE
T ss_pred EeCCCCEEEeCCCCCC--cceEEecC-CCCEEEEEEEEEEEecCceEEE
Confidence 999999997 555555 99999886 8999999999999999886544
No 20
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=99.82 E-value=1.3e-19 Score=187.29 Aligned_cols=146 Identities=14% Similarity=0.117 Sum_probs=117.1
Q ss_pred CCCCCce-EEeCCCCEEEEcCCCCHHHHHHHHHhcCCc--eeeccCCCCcccchhhhcCCCCCCcccccccccccEeEEE
Q 042619 1 LAKLRSI-EVDINNKTAWVQAGATIGELYYRISEKSNI--HGFAAGLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDAR 77 (402)
Q Consensus 1 l~~~~~i-~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~--~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~ 77 (402)
-++||+| ++|+++.+|+|||||++.+|.++|.++|.. +++.++....+|+||+++++|.|.. +||..+|+|++++
T Consensus 124 ~~~mn~il~id~~~~~v~v~aGv~~~~l~~~l~~~Gl~~~~~~~p~~~~~~tigG~~~~~g~g~~--~yG~~~d~v~~l~ 201 (560)
T 1e8g_A 124 GKNMNRVLEVNVEGAYCVVEPGVTYHDLHNYLEANNLRDKLWLDVPDLGGGSVLGNAVERGVGYT--PYGDHWMMHSGME 201 (560)
T ss_dssp TTTCCCEEEEETTTTEEEECTTCBHHHHHHHHHHTTCTTTEECCCCSSTTSBHHHHHHTTCBCSS--TTCBTGGGEEEEE
T ss_pred hHhcCCeEEEcCCCCEEEEeCCCCHHHHHHHHHHcCCccccCCCCCCCCccchhhhccCCCCCcc--cceeHHHheeeeE
Confidence 0789999 999999999999999999999999999865 4432334346789999999998875 9999999999999
Q ss_pred EEcCCCcEEe-cc--CCCC---------------ChHHHHhhc----------CCCCceEEEEEEEEeeecCceEEEEEE
Q 042619 78 IVDARGRILD-RE--AMGE---------------DLFWAIRGG----------GGGSFGIILAWKVKLVPVPATVTVFTV 129 (402)
Q Consensus 78 vv~~dG~~~~-~~--~~~~---------------dLf~a~~G~----------g~g~~Gvvt~~~~~~~~~~~~~~~~~~ 129 (402)
||++||++++ +. ..++ +++|+++++ .+|+|||||++++|++|.|+....+.+
T Consensus 202 vVl~dG~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~~GtlGiIt~~tl~l~p~p~~~~~~~~ 281 (560)
T 1e8g_A 202 VVLANGELLRTGMGALPDPKRPETMGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQSNMGIVTKIGIWLMPNPGGYQSYLI 281 (560)
T ss_dssp EEETTSCEEECGGGGSCCCCCGGGTTCCGGGSCCCTTTTTCSCCSSCCCGGGGSSSSSEEEEEEEEECEECCSCEEEEEE
T ss_pred EEeCCCCEEEecCcccCcccccccccchhhhhhhhcccccccccCCcchhcccccCcEEEEEEEEEEEEeCCCceEEEEE
Confidence 9999999996 32 2231 666766643 247999999999999999998777778
Q ss_pred EecchhhHHHHHHHHHHHH
Q 042619 130 SKTLEQGATKILYKWQQVA 148 (402)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~ 148 (402)
.|+...++.+++..++++.
T Consensus 282 ~f~~~~~a~~~~~~~~~~~ 300 (560)
T 1e8g_A 282 TLPKDGDLKQAVDIIRPLR 300 (560)
T ss_dssp EECSTTHHHHHHHHHHHHH
T ss_pred EcCCHHHHHHHHHHHHHHH
Confidence 8876666666666666654
No 21
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=99.76 E-value=4.3e-19 Score=182.55 Aligned_cols=142 Identities=14% Similarity=0.156 Sum_probs=114.6
Q ss_pred CCCCCce-EEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeecc-CCCCcccchhhhcCCCCCCcccccccccc-------
Q 042619 1 LAKLRSI-EVDINNKTAWVQAGATIGELYYRISEKSNIHGFAA-GLCPSVGIGGHITGGGYGTMMRKYGLAAD------- 71 (402)
Q Consensus 1 l~~~~~i-~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~-g~~~~vgvgG~~~~gg~g~~~~~~G~~~d------- 71 (402)
|++||+| ++|+ .++|+||||+++.+|.++|.++|..++... +.|..++|||.+.++++|..+.+||..+|
T Consensus 101 l~rmn~I~~id~-~~~v~v~aGv~l~~L~~~l~~~Gl~~p~~~g~s~~~~tvGG~ia~nagG~~~~~yG~~~d~~~~~~~ 179 (571)
T 1f0x_A 101 TLRLDKLHVLGK-GEQVLAYPGTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFARI 179 (571)
T ss_dssp CTTCCCEEEETT-TTEEEECTTCBHHHHHHHHGGGTEECSCCCGGGGGTCBHHHHHHTTCCCSCTTSCSSCCSCEEEEEE
T ss_pred CcccCCceeECC-CCeEEEcCCcCHHHHHHHHHhcCccCCcCCCccCCCceecccccCCCCcccccCCCchhhhhhhhee
Confidence 6789999 7994 689999999999999999999984221112 34455689999999999999999999999
Q ss_pred ---------cEeEEEEEcCCCcEEe-cc---------------CCC--C-----------------ChHHHH--hhcCCC
Q 042619 72 ---------NVVDARIVDARGRILD-RE---------------AMG--E-----------------DLFWAI--RGGGGG 105 (402)
Q Consensus 72 ---------~v~~~~vv~~dG~~~~-~~---------------~~~--~-----------------dLf~a~--~G~g~g 105 (402)
+|++++||++||++++ +. ..+ + ||+|++ +|+. |
T Consensus 180 ~~~~~l~~~~vl~levVl~dG~i~~~~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~~~Dl~~l~~a~Gse-G 258 (571)
T 1f0x_A 180 NEDGKLTLVNHLGIDLGETPEQILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGCA-G 258 (571)
T ss_dssp CTTSCEEEEECSSBCCCSSHHHHHHHHHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCTTCGGGCCSSTTCT-T
T ss_pred ccCCceEEEEeeeEEEEcCCCcEEEecCccccccchhhhcccccccCCcccccccccccccccccccHHHHHHhcCCC-C
Confidence 9999999999999995 21 222 2 988888 8776 8
Q ss_pred CceEEEEEEEEeeecCceEEEEEEEecchhhHHHHHHHHH
Q 042619 106 SFGIILAWKVKLVPVPATVTVFTVSKTLEQGATKILYKWQ 145 (402)
Q Consensus 106 ~~Gvvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (402)
+||| |++++|++|.|+....+.+.++...++.+++..+.
T Consensus 259 tlGV-t~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~ 297 (571)
T 1f0x_A 259 KLAV-FAVRLDTFEAEKNQQVFYIGTNQPEVLTEIRRHIL 297 (571)
T ss_dssp SSEE-EEEEEECEECCSSCEEEEEEESCHHHHHHHHHHHH
T ss_pred ceeE-EEEEEEEEecCCeEEEEEEEeCCHHHHHHHHHHHH
Confidence 9999 99999999999877777777766555555555554
No 22
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=99.75 E-value=3e-18 Score=176.93 Aligned_cols=120 Identities=18% Similarity=0.175 Sum_probs=100.6
Q ss_pred CCCCceEEeC--CCCEEEEcCCCCHHHHHHHHHhcCCceeecc-CCCCcccchhhhcCCCCCCc----------cccccc
Q 042619 2 AKLRSIEVDI--NNKTAWVQAGATIGELYYRISEKSNIHGFAA-GLCPSVGIGGHITGGGYGTM----------MRKYGL 68 (402)
Q Consensus 2 ~~~~~i~~d~--~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~-g~~~~vgvgG~~~~gg~g~~----------~~~~G~ 68 (402)
++||+|++|+ +.++|+||||+++.+|.++|.++|. .++. +..+.++|||.+.+|++|.. +++||.
T Consensus 92 ~~l~~i~vd~~~~~~~v~v~aGv~l~~L~~~l~~~Gl--~l~~~~~~~~~TvGG~i~~~~~G~~l~~gG~~~~s~~~~G~ 169 (561)
T 2i0k_A 92 THLNGITVNTGGPVATVTAGAGASIEAIVTELQKHDL--GWANLPAPGVLSIGGALAVNAHGAALPAVGQTTLPGHTYGS 169 (561)
T ss_dssp TTSCCEEEECCSSSCEEEEETTSBHHHHHHHHHHTTE--ECSSCCSCTTCBHHHHHHTTCCCSCCCCTTCCCCTTCCSSC
T ss_pred hhCCceEecCcCCccEEEEcCCCCHHHHHHHHHHcCC--cccccCCCCCcccCCCcccCCcccccccCCccccccccccc
Confidence 6899999998 8899999999999999999999984 4443 33356889999988777765 678999
Q ss_pred ccccEeEEEEEcCCCc---EEeccCCCCChHHHHhhcCCCCceEEEEEEEEeeecCceEEE
Q 042619 69 AADNVVDARIVDARGR---ILDREAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTV 126 (402)
Q Consensus 69 ~~d~v~~~~vv~~dG~---~~~~~~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~~~~~~~ 126 (402)
.+|+|+++|||++||+ +++-..+++||+|+++|.| . ||||++++|++|.++....
T Consensus 170 ~~d~V~~~evV~~dG~~~~~~~~~~~~~dl~~a~~g~G--~-giIt~~tl~l~p~~~~~~~ 227 (561)
T 2i0k_A 170 LSNLVTELTAVVWNGTTYALETYQRNDPRITPLLTNLG--R-CFLTSVTMQAGPNFRQRCQ 227 (561)
T ss_dssp GGGGEEEEEEEEECSSSEEEEEEETTSGGGHHHHSCTT--S-SCEEEEEEECEECCEEEEE
T ss_pred HhheEEEEEEEeCCCCEEEeeeccCCCccHHHHHhcCC--C-EEEEEEEEEEEECCceEEE
Confidence 9999999999999999 6653334799999999654 4 8999999999999876543
No 23
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=99.75 E-value=3.6e-18 Score=173.31 Aligned_cols=117 Identities=18% Similarity=0.179 Sum_probs=97.9
Q ss_pred CCCceEEeCC--CCEEEEcCCCCHHHHHHHHHhcCCceeec-cCCCCcccchhhhcCCCCCCc----------ccccccc
Q 042619 3 KLRSIEVDIN--NKTAWVQAGATIGELYYRISEKSNIHGFA-AGLCPSVGIGGHITGGGYGTM----------MRKYGLA 69 (402)
Q Consensus 3 ~~~~i~~d~~--~~~~~v~~G~~~~~l~~~l~~~~~~~~~~-~g~~~~vgvgG~~~~gg~g~~----------~~~~G~~ 69 (402)
+||+|++|++ ..+|+||+|+++.+|.++|.++| +.++ .+..+.++|||.+++|++|.. +++||..
T Consensus 87 ~Ln~I~vD~~~~~~tVtV~AGv~l~~L~~~L~~~G--L~l~~~~gi~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G~~ 164 (540)
T 3js8_A 87 YLTAMSIDASGPVAKVTAQAGITMEALLTGLEKAG--LGVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAGASYGSI 164 (540)
T ss_dssp TCCCEEEECSSSSEEEEEETTSBHHHHHHHHHHTT--EECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSSCG
T ss_pred cCCCEEECCCCCccEEEEccCCCHHHHHHHHHHcC--CEEEecCCCCCeEEcccccCCCCcccccccccccccccccccH
Confidence 6999999985 68999999999999999999998 4454 233566899999999999986 6899999
Q ss_pred cccEeEEEEEcCCCc-----EEeccCCCCChHHHHhhcCCCCceEEEEEEEEeeecCceE
Q 042619 70 ADNVVDARIVDARGR-----ILDREAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATV 124 (402)
Q Consensus 70 ~d~v~~~~vv~~dG~-----~~~~~~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~~~~~ 124 (402)
+|+|++++||++||+ +++...+++|||++ |+|. |+ ||||+++||++|.+...
T Consensus 165 ~D~V~~levV~adG~~~~~~i~~~s~~~~DL~a~-r~G~-G~-gIVTevtlrl~P~~~l~ 221 (540)
T 3js8_A 165 SNLVLSLTAVVYDKASGAYALRKFARNDPQIAPL-LAHV-GR-SLIVEATLQAAPNQRLR 221 (540)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTSGGGHHH-HTCT-TS-SCEEEEEEEEEECCEEE
T ss_pred HHhEEEEEEEcCCCCCceeeEEEeCCCChhHHHH-HhcC-CC-eEEEEEEEEEEECCceE
Confidence 999999999999998 66633368998555 5455 55 69999999999998754
No 24
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.46 E-value=9.6e-14 Score=133.10 Aligned_cols=111 Identities=23% Similarity=0.193 Sum_probs=85.5
Q ss_pred CCCCCceEEeCCCCEEEEcCCCCHHHHHHHHHhcCCc-eeeccCCCCcccchhhhcCCCCCCccccc-ccccccEeEEEE
Q 042619 1 LAKLRSIEVDINNKTAWVQAGATIGELYYRISEKSNI-HGFAAGLCPSVGIGGHITGGGYGTMMRKY-GLAADNVVDARI 78 (402)
Q Consensus 1 l~~~~~i~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~-~~~~~g~~~~vgvgG~~~~gg~g~~~~~~-G~~~d~v~~~~v 78 (402)
|++||+|++| ..+++||||++|.+|.+++.++|.. +-+..|.+.+ |||.+.+++.| | |..+|+|++++|
T Consensus 104 l~~~~~I~~d--~~~v~v~aG~~~~~l~~~l~~~Gl~Gle~~~giPgT--VGGav~~NaGg-----yGg~~~d~v~~vev 174 (322)
T 3tx1_A 104 LDLLQTIERN--NTQIVAMSGAKLIDTAKFALNESLSGLEFACGIPGS--IGGALHMNAGA-----YGGEISDVLEAATV 174 (322)
T ss_dssp CTTCCCEEEE--TTEEEEETTSBHHHHHHHHHHTTEESCGGGTTCCSB--HHHHHHHTCEE-----TTEEHHHHEEEEEE
T ss_pred CCCCCcEEEC--CCEEEEecCcCHHHHHHHHHHcCCcccccCCCCcch--hHHHHHhCccC-----cccchHhhEEEEEE
Confidence 5689999876 4599999999999999999999841 2244555544 67887755444 4 799999999999
Q ss_pred EcCCCcEEeccCCCCChHHHHhhcCC-CCceEEEEEEEEeeecCc
Q 042619 79 VDARGRILDREAMGEDLFWAIRGGGG-GSFGIILAWKVKLVPVPA 122 (402)
Q Consensus 79 v~~dG~~~~~~~~~~dLf~a~~G~g~-g~~Gvvt~~~~~~~~~~~ 122 (402)
|++||++++.. +.|++|++|++.- +.+||||+++||++|.|+
T Consensus 175 V~~~G~i~~~~--~~~~~~~yR~s~~g~~~~IIt~~tl~L~p~~~ 217 (322)
T 3tx1_A 175 LTQTGELKKLK--RSELKAAYRFSTIAEKNYIVLDATFSLALEEK 217 (322)
T ss_dssp ECTTSCEEEEE--GGGCC--CC-CTTTGGGCEEEEEEEECEECCH
T ss_pred EcCCCCEEEec--hHHcCcchhhcccCCCCEEEEEEEEEEEeCCH
Confidence 99999999732 3689999998742 357899999999999874
No 25
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.43 E-value=7.2e-14 Score=134.61 Aligned_cols=107 Identities=23% Similarity=0.255 Sum_probs=84.0
Q ss_pred CCCCCceEEeCCCCEEEEcCCCCHHHHHHHHHhcCC-ceeeccCCCCcccchhhhcCCCCCCcccccc-cccccEeEEEE
Q 042619 1 LAKLRSIEVDINNKTAWVQAGATIGELYYRISEKSN-IHGFAAGLCPSVGIGGHITGGGYGTMMRKYG-LAADNVVDARI 78 (402)
Q Consensus 1 l~~~~~i~~d~~~~~~~v~~G~~~~~l~~~l~~~~~-~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G-~~~d~v~~~~v 78 (402)
|++||+|++|. .+++||||+++.+|.+++.++|. ++.+..+... +|||.+.++..| || ..+|+|++++|
T Consensus 98 l~~m~~i~id~--~~v~v~aGv~~~~l~~~l~~~Gl~gLe~~~~~Pg--tvGG~i~~nagg-----yG~~~~d~v~~v~v 168 (326)
T 1hsk_A 98 LLSLDHIEVSD--DAIIAGSGAAIIDVSRVARDYALTGLEFACGIPG--SIGGAVYMNAGA-----YGGEVKDCIDYALC 168 (326)
T ss_dssp CTTCCCEEEET--TEEEEETTSBHHHHHHHHHHTTEESCGGGTTCCS--BHHHHHHHTCEE-----TTEEHHHHEEEEEE
T ss_pred eCCCCceEEcC--CEEEEeCCCcHHHHHHHHHHCCCccccccCCCcc--hhhHHHhccccc-----CchhhhhhEEEEEE
Confidence 57899999873 79999999999999999999984 1112222222 589998877655 88 99999999999
Q ss_pred EcCCCcEEeccCCCCChHHHHhhc---CCCCceEEEEEEEEeeec
Q 042619 79 VDARGRILDREAMGEDLFWAIRGG---GGGSFGIILAWKVKLVPV 120 (402)
Q Consensus 79 v~~dG~~~~~~~~~~dLf~a~~G~---g~g~~Gvvt~~~~~~~~~ 120 (402)
|++||++++... .|++|++|+. ++| ||||+++||++|.
T Consensus 169 v~~~G~i~~~~~--~~~~~gyr~~~l~s~g--gIIt~~~l~l~p~ 209 (326)
T 1hsk_A 169 VNEQGSLIKLTT--KELELDYRNSIIQKEH--LVVLEAAFTLAPG 209 (326)
T ss_dssp ECTTSCEEEEET--TTTTCBTTBCHHHHTT--CEEEEEEEECEEC
T ss_pred EeCCCCEEEECh--HHcCCCccccccCCCC--EEEEEEEEEEEcC
Confidence 999999997322 2778877753 224 9999999999998
No 26
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.42 E-value=2.5e-13 Score=131.59 Aligned_cols=111 Identities=18% Similarity=0.098 Sum_probs=91.3
Q ss_pred CCceEEeC--CCCEEEEcCCCCHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCccccccc-ccccEeEEEEEc
Q 042619 4 LRSIEVDI--NNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYGL-AADNVVDARIVD 80 (402)
Q Consensus 4 ~~~i~~d~--~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~-~~d~v~~~~vv~ 80 (402)
|++|+++. +..+++||+|++|.+|.+++.++|. .|.....++.| +.||+.+.+.+.||. .+|+|++++||+
T Consensus 81 ~~~i~v~~~~~~~~v~v~AG~~~~~l~~~a~~~Gl-----~GlE~l~gIPG-tVGGav~~NaGaYG~e~~d~v~~vevv~ 154 (357)
T 3i99_A 81 LNGIEHQQDDDYHRLHVAGGEDWPSLVSWCVEQGI-----GGLENLALIPG-CAGSAPIQNIGAYGVEFKDVCDYVEYLC 154 (357)
T ss_dssp CCCEEEEECSSEEEEEEETTSBHHHHHHHHHHTTC-----TTCGGGTTCCS-BGGGTTTTTCEETTEEGGGTEEEEEEEE
T ss_pred CCceEEeccCCceEEEEeCCCcHHHHHHHHHHcCC-----cCccccCCCCc-hhHHHHHhchhhhhhhHHhhEeEEEEEE
Confidence 88888753 5669999999999999999999984 25555566665 567777778889997 899999999999
Q ss_pred C-CCcEEeccCCCCChHHHHhhcCC----CCceEEEEEEEEeeecCc
Q 042619 81 A-RGRILDREAMGEDLFWAIRGGGG----GSFGIILAWKVKLVPVPA 122 (402)
Q Consensus 81 ~-dG~~~~~~~~~~dLf~a~~G~g~----g~~Gvvt~~~~~~~~~~~ 122 (402)
+ ||++++.. +.||+|++|++.- +++||||+++||++|.+.
T Consensus 155 ~~~G~i~~~~--~~dl~f~YR~s~~~~~~g~~gIIt~v~f~L~p~~~ 199 (357)
T 3i99_A 155 LETGTVKRLT--MEECQFGYRDSIFKHQLYQKAVVTAVGLKFAKAWQ 199 (357)
T ss_dssp TTTTEEEEEE--TGGGCCBTTBCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred CCCCcEEEEe--HHHcCcccccccCCCccCCCEEEEEEEEEEEeCCc
Confidence 9 99999733 3599999997642 379999999999999764
No 27
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.34 E-value=2.2e-12 Score=124.54 Aligned_cols=111 Identities=18% Similarity=0.103 Sum_probs=90.7
Q ss_pred CCceE-EeCCC-CEEEEcCCCCHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCccccccc-ccccEeEEEEEc
Q 042619 4 LRSIE-VDINN-KTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYGL-AADNVVDARIVD 80 (402)
Q Consensus 4 ~~~i~-~d~~~-~~~~v~~G~~~~~l~~~l~~~~~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~-~~d~v~~~~vv~ 80 (402)
|++|. ++.+. .+++||+|++|.+|.+++.++|. .|.....++.| +.||+...+.+.||. .+|+|++++||+
T Consensus 65 ~~~i~~i~~~~~~~v~vgAG~~~~~l~~~~~~~Gl-----~Gle~~~gIPG-tVGGa~~~NaGayG~ei~d~v~~v~vv~ 138 (340)
T 1uxy_A 65 IKGIEIHDEPDAWYLHVGAGENWHRLVKYTLQEGM-----PGLENLALIPG-CVGSSPIQNIGAYGVELQRVCAYVDSVE 138 (340)
T ss_dssp CCCEEEEECSSEEEEEEETTSBHHHHHHHHHHTTC-----CSCGGGTTCCS-BGGGTTTTTCEETTEEGGGTEEEEEEEE
T ss_pred CCCcEEEecCCCeEEEEecCCCHHHHHHHHHHCCC-----CccccccCCcc-chhHHHHhccccchhhHHhheeEEEEEE
Confidence 78885 66666 69999999999999999999884 34555566665 667788888888995 899999999999
Q ss_pred C-CCcEEeccCCCCChHHHHhhcC----CCCceEEEEEEEEeeecCc
Q 042619 81 A-RGRILDREAMGEDLFWAIRGGG----GGSFGIILAWKVKLVPVPA 122 (402)
Q Consensus 81 ~-dG~~~~~~~~~~dLf~a~~G~g----~g~~Gvvt~~~~~~~~~~~ 122 (402)
+ ||++++.. +.|++|+.|++. ++++||||+++||++|.+.
T Consensus 139 ~~~G~v~~~~--~~d~~~gYR~s~~~~~~~~~gIVt~v~~~L~~~~~ 183 (340)
T 1uxy_A 139 LATGKQVRLT--AKECRFGYRDSIFKHEYQDRFAIVAVGLRLPKEWQ 183 (340)
T ss_dssp TTTTEEEEEE--TGGGTCBTTBCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred CCCCcEEEEe--HHHhccccCcCccCCcCCCCEEEEEEEEEEEcCCC
Confidence 6 99999733 369999999763 1369999999999999864
No 28
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.27 E-value=1.1e-12 Score=122.37 Aligned_cols=107 Identities=21% Similarity=0.216 Sum_probs=83.1
Q ss_pred CCCCCceEEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccc-cccccEeEEEEE
Q 042619 1 LAKLRSIEVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYG-LAADNVVDARIV 79 (402)
Q Consensus 1 l~~~~~i~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G-~~~d~v~~~~vv 79 (402)
|++||+|++|. +||+|++|.+|.+++.++| +. |.....++.| +.||+...+.+.|| ..+|+|++++||
T Consensus 66 l~~~~~I~vd~-----~v~aG~~~~~l~~~~~~~G--l~---Gle~~~giPG-tvGGav~~NaGayG~e~~d~v~~v~vv 134 (268)
T 2gqt_A 66 AGEFQTYDLKG-----WVGAGTLLPLLVQEAARAG--LS---GLEGLLGIPA-QVGGAVKMNAGTRFGEMADALEAVEVF 134 (268)
T ss_dssp CGGGGCBCTTS-----EEETTSBHHHHHHHHHHTT--EE---SCGGGTTCCC-BHHHHHHTTCEETTEEGGGGEEEEEEE
T ss_pred cCCCCCcEEcC-----EEECCCCHHHHHHHHHHcC--Cc---CCccccCccc-hhHHHHHhccccCchhHHhheeEEEEE
Confidence 34688887652 9999999999999999998 42 4455555555 55666666777899 699999999999
Q ss_pred cCCCcEEeccCCCCChHHHHhhcCCCCceEEEEEEEEeeecC
Q 042619 80 DARGRILDREAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVP 121 (402)
Q Consensus 80 ~~dG~~~~~~~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~~ 121 (402)
+||++++.. +.||+|++|++.-..-||||+++||++|.+
T Consensus 135 -~~G~v~~~~--~~~l~~~YR~s~~~~~gIVt~~~~~L~~~~ 173 (268)
T 2gqt_A 135 -HDGAFHVYC--PEELGFGYRKSHLPPGGIVTRVRLKLKERP 173 (268)
T ss_dssp -ETTEEEEEC--GGGSCCBTTBCCCSTTCEEEEEEECCEECC
T ss_pred -CCCcEEEEc--hHHcccccCCCCcCCCceEEEEEEEEEeCC
Confidence 999999733 358999999765111149999999999984
No 29
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=91.44 E-value=0.098 Score=51.47 Aligned_cols=59 Identities=17% Similarity=0.219 Sum_probs=36.6
Q ss_pred hhHHHHHHHHHHhccccccCCCCce-eccccCCccCCCCCCCcchhcccccccccccccHHHHHHhhhccCCCCCCcCC
Q 042619 317 TKHNGWIRRLYDYMAPYASIFPRAA-YVNYRDLDLGLNKKFNTSYTEASAWGTKYFKDNFNRLVRVKIKVDPDNIFRHE 394 (402)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~g~-Y~N~~d~~~~~~~~~~~~~~~~~~w~~~~~g~n~~rL~~iK~kyDP~~lF~~~ 394 (402)
+...++++++.+.+..+. |. |-.+ +.... .+...+. |+ +++++++||++|||+++|...
T Consensus 355 ~~~~~~~~~~~~lv~~~g-----G~~~wgk-~~~~~-----------~~~~~~~-Yp-~~~~f~~vk~~~DP~g~f~n~ 414 (422)
T 2vfr_A 355 AAVLPVVRRLEEALVPFA-----ARPHWGK-VFTVP-----------AGELRAL-YP-RLADFGALAGALDPAGKFTNA 414 (422)
T ss_dssp HHHHHHHHHHHHHHGGGT-----CEECTTS-CCCCC-----------HHHHHTT-CT-THHHHHHHHHHHCTTCTTCCH
T ss_pred hhHHHHHHHHHHHHHHcC-----Ccccccc-cCCCC-----------HHHHHHH-Cc-CHHHHHHHHHHhCCCCccCCH
Confidence 345567777777666662 22 2222 11111 1233443 45 799999999999999999764
No 30
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=88.55 E-value=0.37 Score=44.77 Aligned_cols=105 Identities=15% Similarity=0.083 Sum_probs=60.6
Q ss_pred CCCceEEeCCCCEEEEcCCCCHHHHHH--HHHhcCCc-eee--ccCCCC----cccchhhhcCCCCCCcccccccccccE
Q 042619 3 KLRSIEVDINNKTAWVQAGATIGELYY--RISEKSNI-HGF--AAGLCP----SVGIGGHITGGGYGTMMRKYGLAADNV 73 (402)
Q Consensus 3 ~~~~i~~d~~~~~~~v~~G~~~~~l~~--~l~~~~~~-~~~--~~g~~~----~vgvgG~~~~gg~g~~~~~~G~~~d~v 73 (402)
.|+.|+. +++.++||+|+++.+|.+ .+.+ +.. +.. ..-..+ .-+|||++.++.. ..|-+
T Consensus 59 eL~~i~~--~~~~l~iGA~~tl~~l~~~~~~~~-~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~---------~~D~~ 126 (287)
T 1ffv_C 59 ELRGIRE--EGSTVVIGAMTVENDLISSPIVQA-RLPLLAEAAKLIADPQVRNRGTIGGDIAHGDP---------GNDHP 126 (287)
T ss_dssp GGCCEEE--ETTEEEEETTCBHHHHHHCHHHHH-HCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCT---------TCSHH
T ss_pred hhcceEe--cCCEEEEccCCcHHHHhhChHHHH-HhHHHHHHHHHhCCHHHhcceechhhhccCCC---------cHHHH
Confidence 3566665 445799999999999985 3433 221 110 001112 2358999988742 34544
Q ss_pred e-------EEEEEcCCCcEEeccCCCCChHHHHhhcCCCCceEEEEEEEEeeecCc
Q 042619 74 V-------DARIVDARGRILDREAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPA 122 (402)
Q Consensus 74 ~-------~~~vv~~dG~~~~~~~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~~~ 122 (402)
. .+++..++| ..+-. -.|+|.+.|-..=..=-|||+++|.+.+...
T Consensus 127 ~~l~Al~A~v~~~~~~G-~r~i~--~~df~~g~~~t~l~~~eii~~i~ip~~~~~~ 179 (287)
T 1ffv_C 127 ALSIAVEAHFVLEGPNG-RRTVP--ADGFFLGTYMTLLEENEVMVEIRVPAFAQGT 179 (287)
T ss_dssp HHHHHTTCEEEEEETTE-EEEEE--STTTEEETTEESCCTTCEEEEEEEECCCTTC
T ss_pred HHHHHcCcEEEEEcCCc-eEEEE--HHHHhcCcccccCCCCCEEEEEEecCCCCCC
Confidence 4 588899999 33322 2366654431000011489999998876433
No 31
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=86.45 E-value=0.64 Score=46.92 Aligned_cols=31 Identities=23% Similarity=0.204 Sum_probs=23.5
Q ss_pred ccccccccc-HHHHHHhhhccCCCCCCcCCCC
Q 042619 366 WGTKYFKDN-FNRLVRVKIKVDPDNIFRHEQS 396 (402)
Q Consensus 366 w~~~~~g~n-~~rL~~iK~kyDP~~lF~~~~~ 396 (402)
|...+||++ ++-+++||+.+||+|+|.-..-
T Consensus 481 ~~~~~~g~~~~~lmr~IK~a~DP~~IlNPGki 512 (520)
T 1wvf_A 481 RVAQSYGPVKRKLEHAIKRAVDPNNILAPGRS 512 (520)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTTCCBCTTGG
T ss_pred hhhhhcCHHHHHHHHHHHHHcCCCCCCCCCcC
Confidence 446777765 5666999999999999975443
No 32
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=82.60 E-value=1.8 Score=45.06 Aligned_cols=29 Identities=38% Similarity=0.539 Sum_probs=23.9
Q ss_pred cccccccc-ccHHHHHHhhhccCCCCCCcC
Q 042619 365 AWGTKYFK-DNFNRLVRVKIKVDPDNIFRH 393 (402)
Q Consensus 365 ~w~~~~~g-~n~~rL~~iK~kyDP~~lF~~ 393 (402)
.|-..++| ..++.|++||+.+||+|+|+-
T Consensus 625 ~~l~~~~g~~~l~lmr~IK~a~DP~gILNP 654 (658)
T 4bby_A 625 QWLKESISDVGFGMLKSVKDYVDPTNIFGN 654 (658)
T ss_dssp GGHHHHHCHHHHHHHHHHHHHHSTTCSSCS
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCcccCCCC
Confidence 46566666 569999999999999999964
No 33
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=66.55 E-value=5.9 Score=40.20 Aligned_cols=23 Identities=22% Similarity=0.200 Sum_probs=19.4
Q ss_pred ccHHHHHHhhhccCCCCCCcCCC
Q 042619 373 DNFNRLVRVKIKVDPDNIFRHEQ 395 (402)
Q Consensus 373 ~n~~rL~~iK~kyDP~~lF~~~~ 395 (402)
..++-+++||+.+||+|+|.-..
T Consensus 523 ~~~~lm~~iK~~~DP~gILNPGk 545 (560)
T 1e8g_A 523 SFLRFNEVLKNAVDPNGIIAPGK 545 (560)
T ss_dssp HHHHHHHHHHHHHCTTCCBCTTG
T ss_pred HHHHHHHHHHHHcCccCCCCCCc
Confidence 46888999999999999996443
No 34
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=51.47 E-value=5.9 Score=40.24 Aligned_cols=22 Identities=18% Similarity=0.445 Sum_probs=20.3
Q ss_pred ccHHHHHHhhhccCCCCCCcCC
Q 042619 373 DNFNRLVRVKIKVDPDNIFRHE 394 (402)
Q Consensus 373 ~n~~rL~~iK~kyDP~~lF~~~ 394 (402)
.++++.+++|+++||+++|...
T Consensus 533 p~~~~f~~~r~~~DP~g~F~n~ 554 (561)
T 2i0k_A 533 ENWDTARARYNQIDPHRVFTNG 554 (561)
T ss_dssp SSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCHHHHHHHHHhcCCCCccCCH
Confidence 8899999999999999999764
No 35
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=50.13 E-value=5.2 Score=39.81 Aligned_cols=28 Identities=25% Similarity=0.539 Sum_probs=22.8
Q ss_pred ccccccccccHHHHHHhhhccCCCCCCcCC
Q 042619 365 AWGTKYFKDNFNRLVRVKIKVDPDNIFRHE 394 (402)
Q Consensus 365 ~w~~~~~g~n~~rL~~iK~kyDP~~lF~~~ 394 (402)
.+...| .++++.++||+++||+++|...
T Consensus 446 ~~~~~Y--P~~~~F~~lr~~~DP~g~F~n~ 473 (481)
T 4feh_A 446 TFHAMY--PRVDEWISVRRKVDPLRVFASD 473 (481)
T ss_dssp HHHHHC--TTHHHHHHHHHHHCTTCCBCCH
T ss_pred HHHHhC--cCHHHHHHHHHhhCCccccCCH
Confidence 455555 6899999999999999999753
No 36
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=49.40 E-value=6.9 Score=36.06 Aligned_cols=103 Identities=17% Similarity=0.088 Sum_probs=56.1
Q ss_pred CCceEEeCCCCEEEEcCCCCHHHHHH--HHHhcCCceee--ccCCCC----cccchhhhcCCCCCCcccccccccccEe-
Q 042619 4 LRSIEVDINNKTAWVQAGATIGELYY--RISEKSNIHGF--AAGLCP----SVGIGGHITGGGYGTMMRKYGLAADNVV- 74 (402)
Q Consensus 4 ~~~i~~d~~~~~~~v~~G~~~~~l~~--~l~~~~~~~~~--~~g~~~----~vgvgG~~~~gg~g~~~~~~G~~~d~v~- 74 (402)
|+.|+. +++.++||+++++.+|.+ .+.++-..+.- ..-..+ ..+|||++..+. ...|.+.
T Consensus 60 L~~I~~--~~~~l~IGA~~t~~~l~~~~~~~~~~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~---------p~sD~~~~ 128 (288)
T 1n62_C 60 LVGIRE--EGTDVVIGAMTTQHALIGSDFLAAKLPIIRETSLLIADPQIRYMGTIGGNAANGD---------PGNDMPAL 128 (288)
T ss_dssp GSCEEE--ETTEEEEETTCBHHHHHHCHHHHHHCHHHHHHHTTSSCHHHHHHCBHHHHHHSCC---------TTCSHHHH
T ss_pred hcceEe--cCCEEEEccCCcHHHHhcChHHHHHHHHHHHHHHHhCCHHHHccccccchhccCC---------CchHHHHH
Confidence 455654 456899999999999984 44432111110 011112 236899998873 2345444
Q ss_pred ------EEEEEcCCCcEEeccCCCCChHHHHhh-cCCCCceEEEEEEEEeeecC
Q 042619 75 ------DARIVDARGRILDREAMGEDLFWAIRG-GGGGSFGIILAWKVKLVPVP 121 (402)
Q Consensus 75 ------~~~vv~~dG~~~~~~~~~~dLf~a~~G-~g~g~~Gvvt~~~~~~~~~~ 121 (402)
.+++..++|+-.-.- .|+|.+.+- .- ..=-|||++.+...+..
T Consensus 129 L~Al~A~v~l~~~~G~r~v~~---~df~~g~~~t~l-~~~eil~~i~ip~~~~~ 178 (288)
T 1n62_C 129 MQCLGAAYELTGPEGARIVAA---RDYYQGAYFTAI-EPGELLTAIRIPVPPTG 178 (288)
T ss_dssp HHHHTCEEEEEETTEEEEEEH---HHHEEETTEESC-CTTCEEEEEEEECCCTT
T ss_pred HHHhCcEEEEEeCCccEEEEH---HHHhcCcccccC-CCCCEEEEEEeCCCCCC
Confidence 567778888422111 244432210 00 01158999999776543
No 37
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=48.55 E-value=21 Score=36.31 Aligned_cols=29 Identities=28% Similarity=0.481 Sum_probs=18.8
Q ss_pred cccccccc-ccHHHHHHhhhccCCCCCCcC
Q 042619 365 AWGTKYFK-DNFNRLVRVKIKVDPDNIFRH 393 (402)
Q Consensus 365 ~w~~~~~g-~n~~rL~~iK~kyDP~~lF~~ 393 (402)
.|-...+| ..++-+++||+.+||+|+|+-
T Consensus 551 ~~l~~~~g~~~~~lmr~iK~a~DP~gIlNP 580 (584)
T 2uuu_A 551 PWMTRYATRGWINVYRSLKETIDPKDICNP 580 (584)
T ss_dssp --------CTHHHHHHHHHHHHCTTCCBSC
T ss_pred HHHHHhcCHHHHHHHHHHHHHcCCCcCCCC
Confidence 35555555 568999999999999999864
No 38
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=47.22 E-value=9 Score=38.98 Aligned_cols=27 Identities=19% Similarity=0.121 Sum_probs=20.4
Q ss_pred cccHHHHHHhhhccCCCCCCcCCCCCCC
Q 042619 372 KDNFNRLVRVKIKVDPDNIFRHEQSIPP 399 (402)
Q Consensus 372 g~n~~rL~~iK~kyDP~~lF~~~~~i~~ 399 (402)
++... |++||+.+||.|+|+-...+.+
T Consensus 536 ~~~~~-m~~iK~~~DP~~ilNPGk~~t~ 562 (571)
T 1f0x_A 536 KAPET-LQKFYRENDPTNSMNPGIGKTS 562 (571)
T ss_dssp CCCHH-HHHHHHHHCTTCCBSTTTTTCC
T ss_pred CCHHH-HHHHHHHhCCCCCCCCCcCcCC
Confidence 44444 9999999999999976555443
No 39
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=40.69 E-value=11 Score=37.93 Aligned_cols=23 Identities=17% Similarity=0.280 Sum_probs=20.9
Q ss_pred cccHHHHHHhhhccCCCCCCcCC
Q 042619 372 KDNFNRLVRVKIKVDPDNIFRHE 394 (402)
Q Consensus 372 g~n~~rL~~iK~kyDP~~lF~~~ 394 (402)
|++++.-+++++++||+++|..+
T Consensus 511 ~~~~~~~~~~~~~~DP~~~F~n~ 533 (540)
T 3js8_A 511 AANWDAAKAALAAYDPYRLFSSP 533 (540)
T ss_dssp GGSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCCHHHHHHHHHhcCCCcccCCH
Confidence 58999999999999999999753
No 40
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=38.79 E-value=72 Score=23.47 Aligned_cols=34 Identities=12% Similarity=0.183 Sum_probs=27.8
Q ss_pred CceEEeCCCCEEEEcCCCCHHHHHHHHHhcCCce
Q 042619 5 RSIEVDINNKTAWVQAGATIGELYYRISEKSNIH 38 (402)
Q Consensus 5 ~~i~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~ 38 (402)
..+++|...+.++|..-+...+|.+.+.+.|+..
T Consensus 47 ~~v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy~~ 80 (98)
T 2crl_A 47 QDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQA 80 (98)
T ss_dssp CEEEEETTTTEEEEEESSCHHHHHHHHHTTTSCE
T ss_pred eEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCce
Confidence 3457899999999987778899999998888653
No 41
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=34.75 E-value=22 Score=35.06 Aligned_cols=105 Identities=17% Similarity=0.103 Sum_probs=59.2
Q ss_pred CCceEEeCCCCEEEEcCCCCHHHHHHHHHhcCCc-e--eeccCCCCc----ccchhhhcCCCCCCcccccccccccEe--
Q 042619 4 LRSIEVDINNKTAWVQAGATIGELYYRISEKSNI-H--GFAAGLCPS----VGIGGHITGGGYGTMMRKYGLAADNVV-- 74 (402)
Q Consensus 4 ~~~i~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~-~--~~~~g~~~~----vgvgG~~~~gg~g~~~~~~G~~~d~v~-- 74 (402)
|+.|+.+ ++.++||+|+++.+|.+.+.+ ... + ++..-..+. -+|||++..+-.+ +-...-++
T Consensus 231 L~~I~~~--~~~l~IGA~vtl~~l~~~l~~-~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp~------sD~~~~L~AL 301 (462)
T 2w3s_A 231 LAQIRET--PDGYGIGAGVTIAALRAFAEG-PHPALAGLLRRFASEQVRQVATIGGNIANGSPI------GDGPPALIAM 301 (462)
T ss_dssp GSCEEEE--TTEEEEETTCBHHHHHHHHTT-TCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCTT------CSHHHHHHHT
T ss_pred hCcEEEc--CCEEEEccCCcHHHHHHHHHH-HhHHHHHHHHHhCChhheeeEEcccccccCCCc------chHHHHHHHc
Confidence 5666654 457999999999999987533 221 1 001111222 4689999987643 32333444
Q ss_pred --EEEEEcCCCcEEeccCCCCChHHHHhhcCCCCceEEEEEEEEeeec
Q 042619 75 --DARIVDARGRILDREAMGEDLFWAIRGGGGGSFGIILAWKVKLVPV 120 (402)
Q Consensus 75 --~~~vv~~dG~~~~~~~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~ 120 (402)
.+++..++|+ .+-. -.|+|.+.+--.=..=-|||++.|...+.
T Consensus 302 dA~v~l~~~~G~-R~vp--~~dF~~g~~~t~L~~~Eii~~i~iP~~~~ 346 (462)
T 2w3s_A 302 GASLTLRRGQER-RRMP--LEDFFLEYRKQDRRPGEFVESVTLPKSAP 346 (462)
T ss_dssp TCEEEEEBTTBC-CCCB--GGGGEEETTEESCCTTCEEEEEEEESCCS
T ss_pred CCEEEEEeCCce-EEEE--HHHhhcccccccCCCCcEEEEEEEecCCC
Confidence 6778888883 2211 13665433210000014899999977653
No 42
>2gvs_A Chemosensory protein CSP-SG4; alpha-coil, lipid binding protein; NMR {Schistocerca gregaria}
Probab=22.61 E-value=28 Score=27.05 Aligned_cols=14 Identities=36% Similarity=0.705 Sum_probs=11.6
Q ss_pred HHhhhccCCCCCCc
Q 042619 379 VRVKIKVDPDNIFR 392 (402)
Q Consensus 379 ~~iK~kyDP~~lF~ 392 (402)
.+|++||||++-+.
T Consensus 84 ~~L~~KyDP~g~y~ 97 (109)
T 2gvs_A 84 AQLKAKYDPDGTYS 97 (109)
T ss_dssp HHHHHHHCTTCTTT
T ss_pred HHHHHHHCCCchHH
Confidence 56889999999774
No 43
>1k19_A Chemosensory protein CSP2; pheromone, lipid transport; NMR {Mamestra brassicae} SCOP: a.118.21.1 PDB: 1kx8_A 1kx9_A 1n8u_A* 1n8v_A* 2jnt_A
Probab=20.87 E-value=32 Score=26.84 Aligned_cols=14 Identities=29% Similarity=0.472 Sum_probs=11.4
Q ss_pred HHhhhccCCCCCCc
Q 042619 379 VRVKIKVDPDNIFR 392 (402)
Q Consensus 379 ~~iK~kyDP~~lF~ 392 (402)
.+|++||||++-+.
T Consensus 82 ~~L~~KyDP~g~y~ 95 (112)
T 1k19_A 82 RELTAKYDPTGNWR 95 (112)
T ss_dssp HHHHHSSTTTCSSH
T ss_pred HHHHHHHCCCchHH
Confidence 46789999999774
Done!