Query 042620
Match_columns 392
No_of_seqs 122 out of 546
Neff 5.6
Searched_HMMs 46136
Date Fri Mar 29 07:58:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042620.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042620hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1172 Na+-independent Cl/HCO 100.0 9E-111 2E-115 892.4 30.5 362 5-375 359-737 (876)
2 TIGR00834 ae anion exchange pr 100.0 5E-107 1E-111 880.5 30.0 358 6-374 369-760 (900)
3 PF00955 HCO3_cotransp: HCO3- 100.0 6E-109 1E-113 856.4 3.8 357 5-373 32-440 (510)
4 COG0659 SUL1 Sulfate permease 98.9 1.7E-07 3.6E-12 100.2 21.2 279 16-340 31-317 (554)
5 TIGR00815 sulP high affinity s 98.4 1.9E-05 4.1E-10 84.5 20.3 292 13-340 22-328 (563)
6 PRK11660 putative transporter; 98.3 3.4E-05 7.4E-10 82.7 18.7 279 22-338 46-346 (568)
7 TIGR03173 pbuX xanthine permea 96.9 0.084 1.8E-06 54.3 19.0 264 12-329 5-280 (406)
8 TIGR00801 ncs2 uracil-xanthine 96.8 0.16 3.5E-06 52.6 20.2 268 12-329 15-296 (415)
9 PRK11412 putative uracil/xanth 95.9 1.8 3.9E-05 45.5 21.9 271 12-327 18-300 (433)
10 KOG0236 Sulfate/bicarbonate/ox 95.6 0.77 1.7E-05 50.7 18.3 268 39-334 108-390 (665)
11 PF00916 Sulfate_transp: Sulfa 95.1 0.072 1.6E-06 51.4 7.6 204 114-339 4-215 (280)
12 PF00860 Xan_ur_permease: Perm 94.9 1.3 2.8E-05 45.4 16.4 272 12-326 11-291 (389)
13 PRK10720 uracil transporter; P 93.4 11 0.00024 39.4 19.9 251 12-326 24-284 (428)
14 COG2233 UraA Xanthine/uracil p 92.5 8.6 0.00019 40.8 17.4 269 12-326 26-304 (451)
15 TIGR03616 RutG pyrimidine util 85.0 54 0.0012 34.4 21.5 120 12-146 40-165 (429)
16 PF13792 Sulfate_tra_GLY: Sulf 57.6 6.7 0.00014 32.0 1.7 47 22-74 33-79 (84)
17 PF12075 KN_motif: KN motif; 46.7 8 0.00017 27.4 0.4 18 297-314 3-20 (39)
18 TIGR00843 benE benzoate transp 38.0 2.4E+02 0.0053 29.5 9.9 114 21-152 241-354 (395)
19 PF13172 PepSY_TM_1: PepSY-ass 31.0 75 0.0016 21.2 3.3 25 93-117 5-29 (34)
20 PF03594 BenE: Benzoate membra 28.2 3.8E+02 0.0082 28.1 9.3 102 37-152 237-338 (378)
21 PF02109 DAD: DAD family; Int 27.7 2.5E+02 0.0055 24.4 6.7 54 172-225 54-111 (112)
22 PRK14751 tetracycline resistan 27.5 20 0.00042 23.2 -0.1 9 302-310 16-24 (28)
23 PF12036 DUF3522: Protein of u 21.0 6.7E+02 0.015 23.2 9.1 20 186-205 132-151 (186)
24 PF13214 DUF4022: Protein of u 20.9 57 0.0012 25.9 1.4 29 295-323 41-69 (83)
25 PF00916 Sulfate_transp: Sulfa 20.3 96 0.0021 29.7 3.1 55 9-63 150-204 (280)
No 1
>KOG1172 consensus Na+-independent Cl/HCO3 exchanger AE1 and related transporters (SLC4 family) [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.5e-111 Score=892.36 Aligned_cols=362 Identities=40% Similarity=0.611 Sum_probs=328.2
Q ss_pred CccchhHHHHHHHhhhhhHHHhhcccccccCCccchhHHHHhhhhhHHHHHhhcCcceeeeccCchhHHHHHHHHHhhcc
Q 042620 5 GFGMMAPTTYIFFASALPVIAFGEQHAKDTDGSLSTVETLSSTALCGIVHSVLGGQPLLILGVAEPTVLMYTYLYNFAKD 84 (392)
Q Consensus 5 ~~~~laa~~flyFa~l~PaIaFG~ll~~~T~~~igv~E~lls~ai~Giifslf~GQPL~Ilg~TGP~~vf~~~ly~~~~~ 84 (392)
+.||+|+++|+||||++|+||||++|+++|+|.+||+|+|+|||+||++||+||||||+|+|+|||++|||+++|+||++
T Consensus 359 ~~~~la~~lfiYfa~l~P~ItFG~ll~~~Tdg~~~v~E~L~stal~GiifslfggQPLlIlg~TgP~lVfe~~lf~f~~~ 438 (876)
T KOG1172|consen 359 NIQCLAATLFIYFACLLPAITFGGLLGEATDGLIGVVETLLSTALCGIIFSLFGGQPLLILGVTGPLLVFEKALFKFCKD 438 (876)
T ss_pred ccccchHHHHHHHHhhhhHhhHHHHhhhhccchHHHHHHHHHHHHHHHHHHHhcCCceEEEecCccHHHHHHHHHHHHhh
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccchhhhHHHHHHHHHHHHHHHHHHhhcccchhhhccchhhHHHHHHHHHHHHHHHHHhhhccccCCCC-------
Q 042620 85 REDLGQKVYLAWAGWVCVWTSLMLFLLAIFNACDLINRFTRIAGELFGMLIAVLFLQEAIKGMVSEFKIPKAE------- 157 (392)
Q Consensus 85 ~~~~~~~~fl~~~~WvgiW~~~~~~i~a~~~as~lv~y~TRFTeEiF~~lIs~iFi~eai~~l~~~f~~~~~~------- 157 (392)
++ .+|++||+|||+|++++|+++|++|+|.+|+|+||||||+|++|||+||||||+++++++|+....+
T Consensus 439 ~~----~dyl~~r~wVglW~~~l~illaa~~as~lv~~~TRfteEiF~~LIs~iFi~eai~kl~~i~~~~~~~~~~~~~~ 514 (876)
T KOG1172|consen 439 NG----LDYLAFRAWVGLWTAFLLILLAATNASSLVKYITRFTEEIFGLLISLIFIYEAIKKLIKIFKGLPIEFDSKPNP 514 (876)
T ss_pred CC----CchhhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCc
Confidence 97 6899999999999999999999999999999999999999999999999999999999988643211
Q ss_pred ----------CCCcccccccccchhHHHHHHHHHHHHHHHHhhcccccccccCcccchhhcchhhHHHHHHHHhhccccC
Q 042620 158 ----------DSSSEKYQFHWPYTNGLLGIIFTSGLVCTAIKSRKTRSWWYGTGWFRSFIADYGVPLMVLVWSALSFSVP 227 (392)
Q Consensus 158 ----------~~~~~~~~~~~~~~~~l~sliL~~gtf~~a~~l~~fr~s~f~~~~vR~~isDfgv~iaV~~~t~~~y~~~ 227 (392)
+....+++..|+++++++|++|++||+++++++|+||+|+||++++|++|+|||+|+||++|++++|+.+
T Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~p~~~llslil~~gt~~~a~~lr~fr~s~yf~~~~R~~isDfgvpisIl~~s~i~~~~~ 594 (876)
T KOG1172|consen 515 GADWSGPECESVSGTLLGSSCRPDTALLSLILMFGTLFLALTLRKFKSSRYFPRKVRSLISDFGVPLSILVFSLIDYFGG 594 (876)
T ss_pred ccccccccccccCcccCCCcCCcchHHHHHHHHHHHHHHHHHHHHhccCCccchHHHHHHHhhhhHHHHHHHHHHHhhcc
Confidence 1222345567789999999999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCCccccCCCCCCCCCCCCceEecCCCCccHHHHHHHHHHHHHHHHHhhhchhhHHHHhhccccCCCCCCccchh
Q 042620 228 SKVPSGVPRRLFSPLPWESASLDHWSVIKDMGKVPVAYIFAAFIPAVMIAGLYFFDHSVASQLAQQKEFNLKKPSAYHYD 307 (392)
Q Consensus 228 ~~vp~~~~~~l~~~~~~~~~~~r~W~v~~~~~~~p~~~i~~A~~PA~ll~iL~FmD~nIts~ivn~~e~kLkKg~gyHlD 307 (392)
...+.+.+.+...|.+|.+ .|||+| ++++++|+|++++|++||++++||||||||||++|+||||||||||+|||||
T Consensus 595 ~~~~~kl~vp~~~~~t~~~--~rgw~v-~~~~~~P~~~~~~A~ipalll~iLiFmDqqIts~iv~rke~kLKKgsgyH~D 671 (876)
T KOG1172|consen 595 SVETPKLPVPSVFPPTWPF--DRGWFV-PPFGKNPWWYVFAALIPALLLTILIFMDQQITAVIVNRKENKLKKGSGYHLD 671 (876)
T ss_pred ccCCCccccCcCCCCCCcc--cCCeee-CCCCCCCHHHHHHHHHHHHHHHHHHHhcchHHHHHhhcccccCCCCcchhHH
Confidence 3223334444444555432 299997 4667999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhhhhhhcCCCCCCcCCCCCChhhhhhhhHHHhhhccccccccceeeeecccchHHHHHHHH
Q 042620 308 TFLLGFMTLACGLIGLPPSNGVLLPQSPMHTKSLAVLKTQFMKKKMVESATESIKQKATDSEIYGKIQ 375 (392)
Q Consensus 308 Llllgi~~~v~sllGLPw~~ga~~p~S~~H~~sL~v~~~~~~~~~~~~~~~~~~eqr~s~~~~~~~~~ 375 (392)
|+++|++|++||+|||||+||| +||||+|++||+++++..++++ .+..++|+||||||...+-.+-
T Consensus 672 Llllgil~~icsllGLPw~~~a-~p~S~~H~~SL~v~~~~~apge-~~~i~~V~EQRvtgll~~llvg 737 (876)
T KOG1172|consen 672 LLLLGILTLICSLLGLPWSNAA-TVQSPMHTKSLAVESETSAPGE-QPQIVGVREQRVTGLLQFLLVG 737 (876)
T ss_pred HHHHHHHHHHHHhcCCCccccc-cccCHHHHHHHHHhhcccCCCC-ccccccchhhhhHHHHHHHHHH
Confidence 9999999999999999999999 9999999999999998888776 5569999999999988775543
No 2
>TIGR00834 ae anion exchange protein. They preferentially catalyze anion exchange (antiport) reactions, typically acting as HCO3-:Cl- antiporters, but also transporting a range of other inorganic and organic anions. Additionally, renal Na+:HCO3- cotransporters have been found to be members of the AE family. They catalyze the reabsorption of HCO3- in the renal proximal tubule.
Probab=100.00 E-value=4.8e-107 Score=880.46 Aligned_cols=358 Identities=25% Similarity=0.418 Sum_probs=323.8
Q ss_pred ccchhHHHHHHHhhhhhHHHhhcccccccCCccchhHHHHhhhhhHHHHHhhcCcceeeeccCchhHHHHHHHHHhhccc
Q 042620 6 FGMMAPTTYIFFASALPVIAFGEQHAKDTDGSLSTVETLSSTALCGIVHSVLGGQPLLILGVAEPTVLMYTYLYNFAKDR 85 (392)
Q Consensus 6 ~~~laa~~flyFa~l~PaIaFG~ll~~~T~~~igv~E~lls~ai~Giifslf~GQPL~Ilg~TGP~~vf~~~ly~~~~~~ 85 (392)
+||++|++||||||++||||||++|+++|+|.|||+|+|+|||+||++||+||||||+|+|+|||+++|++++|+||+++
T Consensus 369 ~q~laa~ifiyFA~L~PaIaFG~ll~~~T~g~~gv~E~Llstai~Giifslf~GQPL~IlG~TGPilvF~~~ly~~c~~~ 448 (900)
T TIGR00834 369 PQCLAAVIFIYFAALSPAITFGGLLGEKTRNMMGVSELLISTAVQGVLFALLAAQPLLVVGFSGPLLVFEEAFFSFCESN 448 (900)
T ss_pred chhHHHHHHHHHHHhhHHhhHHHHHHHhhCCcchHHHHHHHHHHHHHHHhhhcCCceEEecCcccHHHHHHHHHHHHhhc
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cccccchhhhHHHHHHHHHHHHHHHHHHhhcccchhhhccchhhHHHHHHHHHHHHHHHHHhhhccccCCCC--------
Q 042620 86 EDLGQKVYLAWAGWVCVWTSLMLFLLAIFNACDLINRFTRIAGELFGMLIAVLFLQEAIKGMVSEFKIPKAE-------- 157 (392)
Q Consensus 86 ~~~~~~~fl~~~~WvgiW~~~~~~i~a~~~as~lv~y~TRFTeEiF~~lIs~iFi~eai~~l~~~f~~~~~~-------- 157 (392)
+ .+|++||+|||+|+++||+++|++|+|++|||+||||||||++|||+||||||+++++++|+.++..
T Consensus 449 ~----~~yl~~~~WigiW~~~~~~lla~~~~s~lvryiTRFTeEiFa~lIs~IFI~eai~~L~~~f~~~~~~~~~~~~~~ 524 (900)
T TIGR00834 449 G----LEYLVGRVWIGLWLVLLVLLLVATEGSFLVRYISRFTQEIFSFLISLIFIYETFSKLIKIFQEHPLQVFYNTLFC 524 (900)
T ss_pred C----CchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccc
Confidence 7 6899999999999999999999999999999999999999999999999999999999998753210
Q ss_pred ------CCCc---------------ccccccccchhHHHHHHHHHHHHHHHHhhcccccccccCcccchhhcchhhHHHH
Q 042620 158 ------DSSS---------------EKYQFHWPYTNGLLGIIFTSGLVCTAIKSRKTRSWWYGTGWFRSFIADYGVPLMV 216 (392)
Q Consensus 158 ------~~~~---------------~~~~~~~~~~~~l~sliL~~gtf~~a~~l~~fr~s~f~~~~vR~~isDfgv~iaV 216 (392)
+.+. ...++.+.++++++|++|++|||++|+++++||+|+||++++|++|+|||+||||
T Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~llsliL~lgTf~~a~~L~~fk~s~yf~~~vR~~isDfgv~iaI 604 (900)
T TIGR00834 525 VPPKPQGPSVSALLEKDCSKLGGTLGGNNCRFQPNTALLSLVLMLGTFFLAMFLRKFKNSRYFPGKARRLIGDFGVPISI 604 (900)
T ss_pred cccccccccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhCCCCcCCchhhhhhhhhhHHHHH
Confidence 0000 0012234478899999999999999999999999999999999999999999999
Q ss_pred HHHHhhccccCccCCCCCCccccCCCCCCCCC--CCCceEecCCCCc---cHHHHHHHHHHHHHHHHHhhhchhhHHHHh
Q 042620 217 LVWSALSFSVPSKVPSGVPRRLFSPLPWESAS--LDHWSVIKDMGKV---PVAYIFAAFIPAVMIAGLYFFDHSVASQLA 291 (392)
Q Consensus 217 ~~~t~~~y~~~~~vp~~~~~~l~~~~~~~~~~--~r~W~v~~~~~~~---p~~~i~~A~~PA~ll~iL~FmD~nIts~iv 291 (392)
++|++++|.++ +++ .+++.+|+.+.|++ .|+|++ ++++.. |+|++++|++||++++||||||||||++|+
T Consensus 605 ~~~t~v~~~~~-~v~---~~kl~Vp~~f~pt~p~~R~W~i-~p~~~~~~~p~w~~~~A~iPAlll~ILiFmD~nIts~iv 679 (900)
T TIGR00834 605 LIMVLVDIFIG-DTY---TQKLSVPSGLKVTNPSARGWFI-PPLGENRPFPWWMMFAAALPALLVFILIFMEQQITTLIV 679 (900)
T ss_pred HHHHHHHHHhc-cCc---ccccCCCCCcCCCCCCCCCeEE-ccccccccccHHHHHHHHHHHHHHHHHHHHHhhhHHHHh
Confidence 99999999754 222 23556676676665 499996 566655 999999999999999999999999999999
Q ss_pred hccccCCCCCCccchhhHHHHHHhhhhhhcCCCCCCcCCCCCChhhhhhhhHHHhhhccccccccceeeeecccchHHHH
Q 042620 292 QQKEFNLKKPSAYHYDTFLLGFMTLACGLIGLPPSNGVLLPQSPMHTKSLAVLKTQFMKKKMVESATESIKQKATDSEIY 371 (392)
Q Consensus 292 n~~e~kLkKg~gyHlDLlllgi~~~v~sllGLPw~~ga~~p~S~~H~~sL~v~~~~~~~~~~~~~~~~~~eqr~s~~~~~ 371 (392)
|+||||||||+||||||+++|++|++||+|||||+||| +||||+|++||++++++..+|+ ..+.++|+|||+||..+.
T Consensus 680 ~~~e~kLkKgsgyH~Dllllg~~~~v~sllGLPw~~aa-tv~S~~Hv~sL~v~~~~~~~Ge-~~~i~~V~EQRvT~ll~~ 757 (900)
T TIGR00834 680 SKKERKLKKGSGFHLDLLLVVGMGGVAALFGLPWLSAA-TVRSVTHANALTVMSKASAPGE-KAQIQEVREQRVTGLLVA 757 (900)
T ss_pred cCccccCCCCcccchHHHHHHHHHHHHHhcCCCccccc-CCcChhhHhHHeeeeeccCCCC-CCccceeEeeehHHHHHH
Confidence 99999999999999999999999999999999999999 9999999999999999988887 456899999999999877
Q ss_pred HHH
Q 042620 372 GKI 374 (392)
Q Consensus 372 ~~~ 374 (392)
-.+
T Consensus 758 lLi 760 (900)
T TIGR00834 758 VLV 760 (900)
T ss_pred HHH
Confidence 544
No 3
>PF00955 HCO3_cotransp: HCO3- transporter family Only partial structure; InterPro: IPR011531 Bicarbonate (HCO3 -) transport mechanisms are the principal regulators of pH in animal cells. Such transport also plays a vital role in acid-base movements in the stomach, pancreas, intestine, kidney, reproductive organs and the central nervous system. Functional studies have suggested four different HCO3 - transport modes. Anion exchanger proteins exchange HCO3 - for Cl- in a reversible, electroneutral manner []. Na+/HCO3 - co-transport proteins mediate the coupled movement of Na+ and HCO3 - across plasma membranes, often in an electrogenic manner []. Na- driven Cl-/HCO3 - exchange and K+/HCO3 - exchange activities have also been detected in certain cell types, although the molecular identities of the proteins responsible remain to be determined. Sequence analysis of the two families of HCO3 - transporters that have been cloned to date (the anion exchangers and Na+/HCO3 - co-transporters) reveals that they are homologous. This is not entirely unexpected, given that they both transport HCO3 - and are inhibited by a class of pharmacological agents called disulphonic stilbenes []. They share around ~25-30% sequence identity, which is distributed along their entire sequence length, and have similar predicted membrane topologies, suggesting they have ~10 transmembrane (TM) domains. This domain is found at the C terminus of many bicarbonate transport proteins. It is also found in some plant proteins responsible for boron transport []. In these proteins it covers almost the entire length of the sequence.; GO: 0006820 anion transport, 0016021 integral to membrane; PDB: 1BH7_A 1BTT_A 1BZK_A 1BTQ_A 1BTR_A 1BNX_A 1BTS_A.
Probab=100.00 E-value=6.3e-109 Score=856.37 Aligned_cols=357 Identities=35% Similarity=0.612 Sum_probs=42.6
Q ss_pred CccchhHHHHHHHhhhhhHHHhhcccccccCCccchhHHHHhhhhhHHHHHhhcCcceeeeccCchhHHHHHHHHHhhcc
Q 042620 5 GFGMMAPTTYIFFASALPVIAFGEQHAKDTDGSLSTVETLSSTALCGIVHSVLGGQPLLILGVAEPTVLMYTYLYNFAKD 84 (392)
Q Consensus 5 ~~~~laa~~flyFa~l~PaIaFG~ll~~~T~~~igv~E~lls~ai~Giifslf~GQPL~Ilg~TGP~~vf~~~ly~~~~~ 84 (392)
+.||+++++||||||++||||||++|+|+|+|.+|++|+|+|+++||++||+||||||+|+|+|||+++||+++|++|++
T Consensus 32 ~~~~~~~~~flyfa~l~PaItFG~ll~~~T~~~~gv~e~l~~~~i~Gi~f~lf~gQPL~Ilg~TgP~~vf~~~l~~~~~~ 111 (510)
T PF00955_consen 32 NLQCLAATLFLYFACLSPAITFGGLLGEATDGAIGVMEVLLSTAICGIIFSLFSGQPLTILGSTGPVLVFEKILYKFCKS 111 (510)
T ss_dssp -SHHHHHHHHHHHHHHHHHHSSS-SS---------HHHHHHHHHHHHHHHHHCC--------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 36999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccchhhhHHHHHHHHHHHHHHHHHHhhcccchhhhccchhhHHHHHHHHHHHHHHHHHhhhccccCCC--------
Q 042620 85 REDLGQKVYLAWAGWVCVWTSLMLFLLAIFNACDLINRFTRIAGELFGMLIAVLFLQEAIKGMVSEFKIPKA-------- 156 (392)
Q Consensus 85 ~~~~~~~~fl~~~~WvgiW~~~~~~i~a~~~as~lv~y~TRFTeEiF~~lIs~iFi~eai~~l~~~f~~~~~-------- 156 (392)
++ .||++||+|||+|++++|++++++|+|.+|||+||||||+|++|||+|||+||+|+++++|+.++-
T Consensus 112 ~~----~~fl~~~~wig~w~~~~~~~~~~~~~s~lv~~~TRfTeEiF~~lIs~iFi~ea~~~l~~~~~~~p~~~~~~~~~ 187 (510)
T PF00955_consen 112 YG----LDFLPFRAWIGIWTAIFLLVLAAFNASFLVRYITRFTEEIFALLISIIFIYEAIKKLVKIFKKYPLNSDYVTQY 187 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cc----cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 87 689999999999999999999999999999999999999999999999999999999998864100
Q ss_pred -------CCCCc-------------cc----------------------ccccccchhHHHHHHHHHHHHHHHHhhcccc
Q 042620 157 -------EDSSS-------------EK----------------------YQFHWPYTNGLLGIIFTSGLVCTAIKSRKTR 194 (392)
Q Consensus 157 -------~~~~~-------------~~----------------------~~~~~~~~~~l~sliL~~gtf~~a~~l~~fr 194 (392)
++.+. .+ .+..+.++++++|++|++|||++|+++++||
T Consensus 188 ~c~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~g~~~g~~c~~~~~~~p~taLlSliL~lgTf~la~~L~~fk 267 (510)
T PF00955_consen 188 SCQCTPPENSNNSTLNPWTNLNNGSINWSNLSNSECENINGELVGTSCDDHVQYQPDTALLSLILALGTFWLAYTLRQFK 267 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccCCCCCCcHHHHHHHHHHHHHHHHHHHHHhc
Confidence 00000 00 0012346678999999999999999999999
Q ss_pred cccccCcccchhhcchhhHHHHHHHHhhccccCccCCCCCCccccCCCCCCCCC--CCCceEecCCCCccHHHHHHHHHH
Q 042620 195 SWWYGTGWFRSFIADYGVPLMVLVWSALSFSVPSKVPSGVPRRLFSPLPWESAS--LDHWSVIKDMGKVPVAYIFAAFIP 272 (392)
Q Consensus 195 ~s~f~~~~vR~~isDfgv~iaV~~~t~~~y~~~~~vp~~~~~~l~~~~~~~~~~--~r~W~v~~~~~~~p~~~i~~A~~P 272 (392)
+|+||++++|++++|||+||+|++|++++|+.+.++|+ +.+|+.++|+. .|+|++ +|++++|+|.+++|++|
T Consensus 268 ~S~yf~~~vR~~isDf~v~iaI~~~~~~~~~~~~~~~k-----L~vp~~f~pt~~~~r~W~v-~p~~~~p~w~~~aA~~p 341 (510)
T PF00955_consen 268 NSPYFPRWVREIISDFGVPIAILIMTLVDYLFGVDTPK-----LNVPSSFKPTSPGKRGWFV-NPFGSLPWWAIFAAIIP 341 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCcCccHHHHHhHHhhHHHHHHHHHHHHHHHhcccccc-----cCCCCCCCCCCCCCCCeec-CcccCCCHHHHHHHHHH
Confidence 99999999999999999999999999999887655443 44566666644 399996 68899999999999999
Q ss_pred HHHHHHHhhhchhhHHHHhhccccCCCCCCccchhhHHHHHHhhhhhhcCCCCCCcCCCCCChhhhhhhhHHHhhhcccc
Q 042620 273 AVMIAGLYFFDHSVASQLAQQKEFNLKKPSAYHYDTFLLGFMTLACGLIGLPPSNGVLLPQSPMHTKSLAVLKTQFMKKK 352 (392)
Q Consensus 273 A~ll~iL~FmD~nIts~ivn~~e~kLkKg~gyHlDLlllgi~~~v~sllGLPw~~ga~~p~S~~H~~sL~v~~~~~~~~~ 352 (392)
|+++++|+|||||||++|+|+||||||||+||||||+++|++|++||++||||+||| +||||+|++||++++|..++|+
T Consensus 342 alll~iL~F~DqnIts~ivn~~e~kLkKg~gyH~DL~llgi~~~v~sllGLPw~~aa-~~~S~~Hv~sL~~~~~~~~pGe 420 (510)
T PF00955_consen 342 ALLLTILFFMDQNITSLIVNRPENKLKKGSGYHLDLFLLGIITLVCSLLGLPWMNAA-TPQSPMHVRSLAVESETSAPGE 420 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHhHhHHHhCChhhccCCCCcccHHHHHHHHHHHHHHHcCCCCcccC-ccCCHHHhCcccEEeccccCCC
Confidence 999999999999999999999999999999999999999999999999999999999 9999999999999999999988
Q ss_pred ccccceeeeecccchHHHHHH
Q 042620 353 MVESATESIKQKATDSEIYGK 373 (392)
Q Consensus 353 ~~~~~~~~~eqr~s~~~~~~~ 373 (392)
+++.++|+|||+|+....-.
T Consensus 421 -~~~i~~V~EqRvT~l~~~~L 440 (510)
T PF00955_consen 421 -KPKIVGVREQRVTGLLVHLL 440 (510)
T ss_dssp ---------------------
T ss_pred -CCeeCeEEEecccHHHHHHH
Confidence 45689999999999877643
No 4
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]
Probab=98.89 E-value=1.7e-07 Score=100.17 Aligned_cols=279 Identities=19% Similarity=0.217 Sum_probs=190.8
Q ss_pred HHhhhhh-HHHhhcccccccCCccchhHHHHhhhhhHHHHHhhcCcceeeeccCchhHHHHHHHHHhhc---cccccccc
Q 042620 16 FFASALP-VIAFGEQHAKDTDGSLSTVETLSSTALCGIVHSVLGGQPLLILGVAEPTVLMYTYLYNFAK---DREDLGQK 91 (392)
Q Consensus 16 yFa~l~P-aIaFG~ll~~~T~~~igv~E~lls~ai~Giifslf~GQPL~Ilg~TGP~~vf~~~ly~~~~---~~~~~~~~ 91 (392)
..+.++| |++|+..-+ .+..--|.++.++|++|++|||.|..|.|+||++.+ .+++.-. ++
T Consensus 31 va~valP~ama~a~~aG------v~p~~GLyas~i~~~v~alfGgs~~~i~GPt~a~~~---v~a~~i~~~~~~------ 95 (554)
T COG0659 31 VAAVALPLAMAFAIAAG------VPPEAGLYASIVAGIIYALFGGSRGLISGPTGAFAV---VLAAVIASLVET------ 95 (554)
T ss_pred HHHHHhHHHHHHHHHcC------CCHHHHHHHHHHHHHHHHHHcCCccceeccchhhHH---HHHHHHHHHHHH------
Confidence 3455679 999998544 667777889999999999999999999999999777 3444443 33
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhcccchhhhccchhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCCccccc--cccc
Q 042620 92 VYLAWAGWVCVWTSLMLFLLAIFNACDLINRFTRIAGELFGMLIAVLFLQEAIKGMVSEFKIPKAEDSSSEKYQ--FHWP 169 (392)
Q Consensus 92 ~fl~~~~WvgiW~~~~~~i~a~~~as~lv~y~TRFTeEiF~~lIs~iFi~eai~~l~~~f~~~~~~~~~~~~~~--~~~~ 169 (392)
++...+-..+-++++++++..+-..++++|+.|--=--|-.=|+++-+..-++++... +...+....... .+.-
T Consensus 96 -g~~~~~~~tllaGv~~i~~G~lRLG~li~fip~pVl~Gf~~Giai~I~~~Ql~~~~G~---~~~~~~~~~~~~~l~~~~ 171 (554)
T COG0659 96 -GLALAFLATLLAGVFQILLGLLRLGRLIRFIPRPVLIGFTAGIAILIILTQLPVLLGL---ASKVSGFWAKVSALFTVL 171 (554)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHcCC---CccccchHHHHHHHHHhc
Confidence 5555577899999999999999999999999997777777778888888877777643 111000000000 0000
Q ss_pred chhHHHHHHHHHHHHHHHHhhcccccccccCcccchhhcchhhHHHHHHHHhhccccCccCC-CC-CCccccCCCCCCCC
Q 042620 170 YTNGLLGIIFTSGLVCTAIKSRKTRSWWYGTGWFRSFIADYGVPLMVLVWSALSFSVPSKVP-SG-VPRRLFSPLPWESA 247 (392)
Q Consensus 170 ~~~~l~sliL~~gtf~~a~~l~~fr~s~f~~~~vR~~isDfgv~iaV~~~t~~~y~~~~~vp-~~-~~~~l~~~~~~~~~ 247 (392)
......++++...++.+-+..++.+ +..|+ ..+++++.+.+++.++.+.+ .+ ++..++.+.|
T Consensus 172 ~~~~~~~~~lg~~~l~il~~~~~~~--~~~P~----------~liaiv~~t~i~~~~~~~~~~~G~i~~~lp~~~~---- 235 (554)
T COG0659 172 LTINLATLLLGLLTLAILLFLPRLT--PRIPS----------PLIALVLGTLIVWIFPLDSLRYGEIPGSLPSGLP---- 235 (554)
T ss_pred ccccHHHHHHHHHHHHHHHHccchh--hhCCc----------HHHHHHHHHHHHHHhcCCchhcccCcccCCcCCC----
Confidence 1112345666666666655555544 34443 67899999999888776654 12 2222222222
Q ss_pred CCCCceEecCCCCccHHHHHHHHHHHHHHHHHhhhchhhHHHHhhccccCCCCCCccchhhHHHHHHhhhhhhcCCCCCC
Q 042620 248 SLDHWSVIKDMGKVPVAYIFAAFIPAVMIAGLYFFDHSVASQLAQQKEFNLKKPSAYHYDTFLLGFMTLACGLIGLPPSN 327 (392)
Q Consensus 248 ~~r~W~v~~~~~~~p~~~i~~A~~PA~ll~iL~FmD~nIts~ivn~~e~kLkKg~gyHlDLlllgi~~~v~sllGLPw~~ 327 (392)
.|. ..++++..+..-+.+|+.++++-+.|+=.|+....+..+. ..--+=+|.-.|+-|+++|+||==+.+
T Consensus 236 ---~~~----~P~~~~~~~~~l~~~al~la~lg~iesllta~~~~~~~~~---~~d~nrELiaqGiaNi~sglfgg~p~~ 305 (554)
T COG0659 236 ---HFR----LPNVSLSLLLALLPYALALALLGLLESLLTAVSFDGMTGT---KHDSNRELIAQGIANIASGLFGGIPAT 305 (554)
T ss_pred ---ccc----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCCCHHHHHhhHHHHHHHHhCCcccc
Confidence 222 2245555556666779999999999999999998776443 233357899999999999999966678
Q ss_pred cCCCCCChhhhhh
Q 042620 328 GVLLPQSPMHTKS 340 (392)
Q Consensus 328 ga~~p~S~~H~~s 340 (392)
|+ +.||...++|
T Consensus 306 g~-~srS~~nv~s 317 (554)
T COG0659 306 GS-ISRSAINIKS 317 (554)
T ss_pred ch-hHHHHHHHHh
Confidence 88 7777665543
No 5
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=98.43 E-value=1.9e-05 Score=84.52 Aligned_cols=292 Identities=11% Similarity=0.058 Sum_probs=177.0
Q ss_pred HHHHHhhhhhHHHhhcccccccCCccchhHHHHhhhhhHHHHHhhcCcceeeeccCchhHHHHH-HHHHhhccccccccc
Q 042620 13 TYIFFASALPVIAFGEQHAKDTDGSLSTVETLSSTALCGIVHSVLGGQPLLILGVAEPTVLMYT-YLYNFAKDREDLGQK 91 (392)
Q Consensus 13 ~flyFa~l~PaIaFG~ll~~~T~~~igv~E~lls~ai~Giifslf~GQPL~Ilg~TGP~~vf~~-~ly~~~~~~~~~~~~ 91 (392)
+-.....+--+++|+.+.+ +...--+.++.+.+++|++||+-|..+.|+|+.+.+... ++-++..+.. ...
T Consensus 22 ltv~~~~iP~~~ayA~lag------lpp~~GLysa~~~~iv~alfGss~~~i~Gp~a~~sl~~~~~v~~~~~~~~--~~~ 93 (563)
T TIGR00815 22 LTVGILLIPQAMAYAILAG------LSPIYGLYTSFVPPFIYALFGTSRDIAIGPVAVMSLLLGSVIARVGLQYL--FDC 93 (563)
T ss_pred HHHHHHHHHHHHHHHHHcC------CCchhhhHHHHHHHHHhheecCCCcccCCHHHHHHHHHHHHHHHhcCCCC--ccc
Confidence 3344445556788887652 333334889999999999999999999999988766443 3334443321 112
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhcccchhhhccchhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCCccccccccc--
Q 042620 92 VYLAWAGWVCVWTSLMLFLLAIFNACDLINRFTRIAGELFGMLIAVLFLQEAIKGMVSEFKIPKAEDSSSEKYQFHWP-- 169 (392)
Q Consensus 92 ~fl~~~~WvgiW~~~~~~i~a~~~as~lv~y~TRFTeEiF~~lIs~iFi~eai~~l~~~f~~~~~~~~~~~~~~~~~~-- 169 (392)
++......+.+-++++.+++..+....+++|+.+-.=.-|..=++++.+..-++++...-..+.+.+.- .+....+.
T Consensus 94 ~~~~~a~~l~~l~Gi~~~~~g~lrlG~l~~~is~~Vi~Gf~~g~a~~i~~~Ql~~~~G~~~~~~~~~~~-~~~~~~~~~l 172 (563)
T TIGR00815 94 DAIRLAFTLTLLAGIFQVILGLLRLGFLIEFLSHAVISGFMTGAAITIGLSQLKGLLGISIFNTRTDTL-GVVISTWAGL 172 (563)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCChH-HHHHHHHHHh
Confidence 588888899999999999999999999999999888888888899988888888886531110111100 00000000
Q ss_pred chh---HHHHHHHHHHHHHHHHhhcccccccccCcccchhhcchhhHHHHHHHHhhccccCc---------cCCCCCCcc
Q 042620 170 YTN---GLLGIIFTSGLVCTAIKSRKTRSWWYGTGWFRSFIADYGVPLMVLVWSALSFSVPS---------KVPSGVPRR 237 (392)
Q Consensus 170 ~~~---~l~sliL~~gtf~~a~~l~~fr~s~f~~~~vR~~isDfgv~iaV~~~t~~~y~~~~---------~vp~~~~~~ 237 (392)
... -..++++.+.++.+-...++.+ +.+++..+..+ -+..+++++.+.+.+.... ++|.+.|
T Consensus 173 ~~~~~~~~~~~~i~~~~~~~l~~~~~~~--~~~~~~~~~~~--p~~li~vi~~~~~~~~~~~~~~~~~~~g~ip~g~p-- 246 (563)
T TIGR00815 173 PNTHNWNWCTLVIGLVLLLFLLYTKKLG--KRNKKLLFAPA--VAPLLVVILATLAVTIGLHKKQGVSILGHIPSGLS-- 246 (563)
T ss_pred hhccccchHHHHHHHHHHHHHHHHHHhh--hhccchhcccc--cHHHHHHHHHHHHHHHHccCCCCeEEEeecCCCCC--
Confidence 000 1333444444444333333221 11111111110 0223344444444433311 1222110
Q ss_pred ccCCCCCCCCCCCCceEecCCCCccHHHHHHHHHHHHHHHHHhhhchhhHHHHhhccccCCCCCCccchhhHHHHHHhhh
Q 042620 238 LFSPLPWESASLDHWSVIKDMGKVPVAYIFAAFIPAVMIAGLYFFDHSVASQLAQQKEFNLKKPSAYHYDTFLLGFMTLA 317 (392)
Q Consensus 238 l~~~~~~~~~~~r~W~v~~~~~~~p~~~i~~A~~PA~ll~iL~FmD~nIts~ivn~~e~kLkKg~gyHlDLlllgi~~~v 317 (392)
.| +.....+..+..-+..|+.++++-|.|+-.++.-..++.+ +..-..-+|...|+.|++
T Consensus 247 -------------~~----~~~~~~~~~~~~l~~~a~~ia~v~~~e~l~~a~~~~~~~~---~~~d~n~El~a~G~~N~~ 306 (563)
T TIGR00815 247 -------------FF----PPITLDWELLPTLAPDAIAIAIVGLIESIAIARSFARMTG---YKIDANQELVAQGIANIV 306 (563)
T ss_pred -------------CC----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CCCCCcHHHHHhhHHHHH
Confidence 01 1112233344555677999999999999888776665432 234566889999999999
Q ss_pred hhhcCCCCCCcCCCCCChhhhhh
Q 042620 318 CGLIGLPPSNGVLLPQSPMHTKS 340 (392)
Q Consensus 318 ~sllGLPw~~ga~~p~S~~H~~s 340 (392)
+|++|--+.++. ..||....++
T Consensus 307 ~~~fg~~p~~~s-~srs~~~~~~ 328 (563)
T TIGR00815 307 GSFFSCYPATGS-LSRTAVNAKA 328 (563)
T ss_pred HHHhCccCCCCc-chHHHHHHhc
Confidence 999999999888 7777766543
No 6
>PRK11660 putative transporter; Provisional
Probab=98.31 E-value=3.4e-05 Score=82.67 Aligned_cols=279 Identities=15% Similarity=0.101 Sum_probs=161.4
Q ss_pred hHHHhhcccccccCCccchhHHHHhhhhhHHHHHhhcCcceeeeccCchhHHHHHHHHHhhccccccccchhhhHHHHHH
Q 042620 22 PVIAFGEQHAKDTDGSLSTVETLSSTALCGIVHSVLGGQPLLILGVAEPTVLMYTYLYNFAKDREDLGQKVYLAWAGWVC 101 (392)
Q Consensus 22 PaIaFG~ll~~~T~~~igv~E~lls~ai~Giifslf~GQPL~Ilg~TGP~~vf~~~ly~~~~~~~~~~~~~fl~~~~Wvg 101 (392)
=++||+.+-+ +...--|.++.+.+++|++||+-|..+.|+|+.+.+. +....++.+ +..-....
T Consensus 46 q~mayA~lag------~pp~~GLysa~~~~~vyal~Gss~~~~~Gp~a~~~~~---~~~~~~~~~-------~~~~~~~~ 109 (568)
T PRK11660 46 LAMALAIASG------VPPQYGLYTAAVAGIVIALTGGSRFSVSGPTAAFVVI---LYPVSQQFG-------LAGLLVAT 109 (568)
T ss_pred HHHHHHHHcC------CChHHHHHHHHHHHHHHHHhcCCCCcccChhHHHHHH---HHHHHHHhh-------HHHHHHHH
Confidence 3566664422 3333348999999999999999999999988887664 334444332 12234678
Q ss_pred HHHHHHHHHHHHhhcccchhhhccchhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCCccc---ccccccchhHHHHHH
Q 042620 102 VWTSLMLFLLAIFNACDLINRFTRIAGELFGMLIAVLFLQEAIKGMVSEFKIPKAEDSSSEK---YQFHWPYTNGLLGII 178 (392)
Q Consensus 102 iW~~~~~~i~a~~~as~lv~y~TRFTeEiF~~lIs~iFi~eai~~l~~~f~~~~~~~~~~~~---~~~~~~~~~~l~sli 178 (392)
+.++++.+++..+...++++|+.|-.=.-|..=++++.+..-++++... +.+....+..+. ...+.... -..+.+
T Consensus 110 ~l~Gii~~l~gllrlG~l~~fip~pVi~Gf~~g~al~I~~~Ql~~~lG~-~~~~~~~~~~~~l~~~~~~l~~~-~~~~~~ 187 (568)
T PRK11660 110 LMSGIILILMGLARLGRLIEYIPLSVTLGFTSGIGIVIATLQIKDFFGL-QMAHVPEHYLEKVGALFQALPTI-NWGDAL 187 (568)
T ss_pred HHHHHHHHHHHHHhhhHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCCCccHHHHHHHHHHhhccC-CHHHHH
Confidence 9999999999999999999999988777888888888777777777432 111000000000 00000001 122444
Q ss_pred HHHHHHHHHHhhcccccccccCcccchhhcchhhHHHHHHHHhhccccCc---cCC-----------CC-----CCcccc
Q 042620 179 FTSGLVCTAIKSRKTRSWWYGTGWFRSFIADYGVPLMVLVWSALSFSVPS---KVP-----------SG-----VPRRLF 239 (392)
Q Consensus 179 L~~gtf~~a~~l~~fr~s~f~~~~vR~~isDfgv~iaV~~~t~~~y~~~~---~vp-----------~~-----~~~~l~ 239 (392)
+++.++.+-+.++++++ ..| +..+++++.+.+.|.... +++ ++ +|+.+
T Consensus 188 ~~~~~l~lll~~~~~~~--~iP----------~~li~iiv~t~~~~~~~~~~~~v~~vg~~~~~~~~~g~~~~~ip~~~- 254 (568)
T PRK11660 188 IGIVTLGVLILWPRLKI--RLP----------GHLPALLAGTAVMGVLNLLGGHVATIGSRFHYVLADGSQGNGIPPLL- 254 (568)
T ss_pred HHHHHHHHHHHHHhhcc--cCc----------hHHHHHHHHHHHHHHHhccCCCceeecccccccccccccccCCCCCC-
Confidence 44444444444444331 112 224566666666544321 111 10 11100
Q ss_pred CCCCCCCCCCCCceEecCCCCccHHHHHHHHHHHHHHHHHhhhchhhHHHHhhccccCCCCCCccchhhHHHHHHhhhhh
Q 042620 240 SPLPWESASLDHWSVIKDMGKVPVAYIFAAFIPAVMIAGLYFFDHSVASQLAQQKEFNLKKPSAYHYDTFLLGFMTLACG 319 (392)
Q Consensus 240 ~~~~~~~~~~r~W~v~~~~~~~p~~~i~~A~~PA~ll~iL~FmD~nIts~ivn~~e~kLkKg~gyHlDLlllgi~~~v~s 319 (392)
|+...|....++ ..+..++++..+..-+.+|+.++++-++|.-.++.-..++.. |..-.+-+|...|+.|+++|
T Consensus 255 -p~~~~p~~~~~~--~~~~~~~~~~~~~~ll~~a~~iaiv~~iesl~~~~~~~~~~~---~~~d~n~EL~a~G~aNi~~~ 328 (568)
T PRK11660 255 -PQFVLPWNLPGA--DGQPFTLSWDLIRALLPAAFSMAMLGAIESLLCAVVLDGMTG---TKHSANSELVGQGLGNIVAP 328 (568)
T ss_pred -CCCCCCcccccc--ccccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCCCCcHHHHHHhHHHHHHH
Confidence 110000000000 001223444444445566888889999998766655544322 33347889999999999999
Q ss_pred hcCCCCCCcCCCCCChhhh
Q 042620 320 LIGLPPSNGVLLPQSPMHT 338 (392)
Q Consensus 320 llGLPw~~ga~~p~S~~H~ 338 (392)
++|-.+.++. ..||....
T Consensus 329 ~fgg~p~~~s-~srSa~n~ 346 (568)
T PRK11660 329 FFGGITATAA-IARSAANV 346 (568)
T ss_pred HhCcccccch-HHHHHHHH
Confidence 9999999988 87875553
No 7
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=96.93 E-value=0.084 Score=54.34 Aligned_cols=264 Identities=11% Similarity=0.109 Sum_probs=139.0
Q ss_pred HHHHHHhhhhhHHHhhcccccccC-CccchhHHHHhhhhhHHHHH----hhcCcceeeeccCchhHHHHHHHHHhhcccc
Q 042620 12 TTYIFFASALPVIAFGEQHAKDTD-GSLSTVETLSSTALCGIVHS----VLGGQPLLILGVAEPTVLMYTYLYNFAKDRE 86 (392)
Q Consensus 12 ~~flyFa~l~PaIaFG~ll~~~T~-~~igv~E~lls~ai~Giifs----lf~GQPL~Ilg~TGP~~vf~~~ly~~~~~~~ 86 (392)
.+++|-+++++.+..+.-++-..+ -..-++-+++.++++.++++ .+++.--.+.|++++... .++..+++.
T Consensus 5 ~l~~~~~~i~~p~i~~~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~---~~~~~~~~~- 80 (406)
T TIGR03173 5 VLAMYAGAVAVPLIVGGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVG---PMIAIGAGG- 80 (406)
T ss_pred hHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHH---HHHHHhhhh-
Confidence 456777777777776543221111 11234678889999999997 667888888888886554 344444432
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHhhcccchhhhcc-chhhHHH---HHHHHHHHHHHHHHhhhccccCCCCCCCcc
Q 042620 87 DLGQKVYLAWAGWVCVWTSLMLFLLAIFNACDLINRFTR-IAGELFG---MLIAVLFLQEAIKGMVSEFKIPKAEDSSSE 162 (392)
Q Consensus 87 ~~~~~~fl~~~~WvgiW~~~~~~i~a~~~as~lv~y~TR-FTeEiF~---~lIs~iFi~eai~~l~~~f~~~~~~~~~~~ 162 (392)
-++--.-..++++++.++++. +.+++.| |+..+=+ ++|.+....-+++..... +. + .
T Consensus 81 ------~~~~~~ga~~v~Gii~illg~-----~~~~l~~~iPp~v~G~~i~~IGl~l~~~~~~~~~g~---~~--~---~ 141 (406)
T TIGR03173 81 ------GLGAIFGAVIVAGLFVILLAP-----FFSKLVRFFPPVVTGTVITLIGLSLMPVAINWAAGG---AG--A---P 141 (406)
T ss_pred ------hHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHhccC---CC--c---c
Confidence 223334567777777777662 3333333 4445544 355555555555544211 00 0 0
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHhhcccccccccCcccchhhcchhhHHHHHHHHhhccccCc-cCCCCCCccccCC
Q 042620 163 KYQFHWPYTNGLLGIIFTSGLVCTAIKSRKTRSWWYGTGWFRSFIADYGVPLMVLVWSALSFSVPS-KVPSGVPRRLFSP 241 (392)
Q Consensus 163 ~~~~~~~~~~~l~sliL~~gtf~~a~~l~~fr~s~f~~~~vR~~isDfgv~iaV~~~t~~~y~~~~-~vp~~~~~~l~~~ 241 (392)
++ .+.. +.++.+.++.+.+..++ ..|+.+.-+++.+++++.+.+.+..+. +.+. +. .
T Consensus 142 ~~---~~~~----~~~l~l~~l~~~il~~~---------~~~~~~~~~aiLi~ivvg~iva~~~g~~~~~~-i~-----~ 199 (406)
T TIGR03173 142 DF---GSPQ----NLGLALLTLVIILLLNR---------FGKGFLRSIAVLLGLVVGTIVAAALGMVDFSG-VA-----E 199 (406)
T ss_pred cc---cchH----HHHHHHHHHHHHHHHHH---------HhhhHHHHhHHHHHHHHHHHHHHHhcCCCchh-hc-----c
Confidence 00 0111 12333333333322222 123345557899999998888765532 2211 10 0
Q ss_pred CCCCCCCCCCceEec-CC-CCccHHHHHHHHHHHHHHHHHhhhchhhHHHHhhccccCCCCCCccchhhHHHHHHhhhhh
Q 042620 242 LPWESASLDHWSVIK-DM-GKVPVAYIFAAFIPAVMIAGLYFFDHSVASQLAQQKEFNLKKPSAYHYDTFLLGFMTLACG 319 (392)
Q Consensus 242 ~~~~~~~~r~W~v~~-~~-~~~p~~~i~~A~~PA~ll~iL~FmD~nIts~ivn~~e~kLkKg~gyHlDLlllgi~~~v~s 319 (392)
.| |.-.+ ++ ...|.+ -+.++.+.+.+++.-++|+-=+..-+.+..++-.+....+-++..-|+-|.++|
T Consensus 200 ~~--------~~~~P~~~~~~~P~f-~~~~~~~~~~~~lv~~~esig~~~a~~~~~g~~~~~~~~~~~l~~~Gi~~i~ag 270 (406)
T TIGR03173 200 AP--------WFALPTPFHFGAPTF-DLVAILTMIIVYLVSMVETTGDFLALGEITGRPITEKDLAGGLRADGLGSALGG 270 (406)
T ss_pred CC--------eeeCCCCCcCCCCee-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhccchHHhccHHHHHHH
Confidence 11 11110 00 111111 122344555667777777754444333332221123456677999999999999
Q ss_pred hcCCCCCCcC
Q 042620 320 LIGLPPSNGV 329 (392)
Q Consensus 320 llGLPw~~ga 329 (392)
++|-++.++.
T Consensus 271 lfG~~p~t~~ 280 (406)
T TIGR03173 271 LFNTFPYTSF 280 (406)
T ss_pred HhCCCCCcch
Confidence 9998775543
No 8
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=96.82 E-value=0.16 Score=52.61 Aligned_cols=268 Identities=14% Similarity=0.128 Sum_probs=149.8
Q ss_pred HHHHHHhhhhhHHHhhcccccccCCccchhHHHHhhhhhHHHHHhhcCcc---eeeeccCchhHHHHHHHHHhhcccccc
Q 042620 12 TTYIFFASALPVIAFGEQHAKDTDGSLSTVETLSSTALCGIVHSVLGGQP---LLILGVAEPTVLMYTYLYNFAKDREDL 88 (392)
Q Consensus 12 ~~flyFa~l~PaIaFG~ll~~~T~~~igv~E~lls~ai~Giifslf~GQP---L~Ilg~TGP~~vf~~~ly~~~~~~~~~ 88 (392)
.+++|-++.+|-+..|..+-+.-+-..=++-+++.++++-+++++..+.| ..++|++- .|-...--..+..+
T Consensus 15 ~l~~~~~~i~~p~iv~~~~l~~~~~~~li~at~~~sgi~Tllq~~~~~~~~~lp~~~G~sf---a~i~~~~~~~~~~~-- 89 (415)
T TIGR00801 15 LLAMFGGTVLVPLLVGLAPLSAEQTQYLVSISLLTSGIGTLLQLFRTGGQIGLPSYLGSSF---AFVSPMIAIGSGLG-- 89 (415)
T ss_pred HHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcCceeeeeeecCcH---HHHHHHHHHHhccC--
Confidence 46678888888888887773333333445678889999999999999999 66666642 22111111111111
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHHHhhccc-----chhhhccchhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCCccc
Q 042620 89 GQKVYLAWAGWVCVWTSLMLFLLAIFNACD-----LINRFTRIAGELFGMLIAVLFLQEAIKGMVSEFKIPKAEDSSSEK 163 (392)
Q Consensus 89 ~~~~fl~~~~WvgiW~~~~~~i~a~~~as~-----lv~y~TRFTeEiF~~lIs~iFi~eai~~l~~~f~~~~~~~~~~~~ 163 (392)
.+ --.=..++++++..+++.+ .+. +.|++++-.--...++|.+....-+++.+.-....+. + .+
T Consensus 90 --~~---~~~g~~i~~gl~~~ll~~~-~~~~~~~~i~~~~Pp~v~g~iv~~IGl~L~~i~l~~~~g~~~~~~--~---~~ 158 (415)
T TIGR00801 90 --IP---AIMGALIATGLVYTLLSLL-IKKLGPRWLMKLFPPVVTGPVVMLIGLSLIPVAVKMAAGGEAAMS--S---AT 158 (415)
T ss_pred --HH---HHHHHHHHHHHHHHHHHHH-HHHhhHHHHHhcCCchhHHHhHHHHHHHHHHHHHHHhccCCCccc--c---cc
Confidence 11 1122345555555555543 122 2455666566667777888888888887643211110 0 00
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHhhcccccccccCcccchhhcchhhHHHHHHHHhhccccCc-cCCCCCCccccCCC
Q 042620 164 YQFHWPYTNGLLGIIFTSGLVCTAIKSRKTRSWWYGTGWFRSFIADYGVPLMVLVWSALSFSVPS-KVPSGVPRRLFSPL 242 (392)
Q Consensus 164 ~~~~~~~~~~l~sliL~~gtf~~a~~l~~fr~s~f~~~~vR~~isDfgv~iaV~~~t~~~y~~~~-~vp~~~~~~l~~~~ 242 (392)
+.. .-++.+++.++.+....++ +.|+.+.-+++.+++++.+.+++.... +.++ + ...
T Consensus 159 ----~~~---~~~~~vg~~~l~~~vl~~~---------~~~g~~~~~aiLigiv~g~i~a~~lg~~~~~~-v-----~~~ 216 (415)
T TIGR00801 159 ----YGS---LENLGVAFVVLALIILLNR---------FGKGFLKSISILIGILVGYILALFMGIVDFSP-V-----IDA 216 (415)
T ss_pred ----cCc---hhhHHHHHHHHHHHHHHHH---------HHhhHHHHHHHHHHHHHHHHHHHHcCCccchh-h-----ccC
Confidence 110 1134455555554433322 223455567999999999888866532 2211 1 111
Q ss_pred CCCCCCCCCceEecCCC----CccHHHHHHHHHHHHHHHHHhhhchhhHHHHhhccc-cCCCCCCccchhhHHHHHHhhh
Q 042620 243 PWESASLDHWSVIKDMG----KVPVAYIFAAFIPAVMIAGLYFFDHSVASQLAQQKE-FNLKKPSAYHYDTFLLGFMTLA 317 (392)
Q Consensus 243 ~~~~~~~r~W~v~~~~~----~~p~~~i~~A~~PA~ll~iL~FmD~nIts~ivn~~e-~kLkKg~gyHlDLlllgi~~~v 317 (392)
| |+-.++.. ++. +.++.+.+.+++.-++|+.=+..-+.++. .+.+|....+=+++.-|+-|.+
T Consensus 217 ~--------~~~lP~~~~~g~~f~----~~~~~~~~~i~lv~~~es~g~~~a~a~~~g~~~~~~~~~~r~l~adGl~~i~ 284 (415)
T TIGR00801 217 P--------WFSLPTPFTFGPSFE----WPAILTMLPVAIVSLVESIGDITATADVSGRDLSGDPRLHRGVLADGLATLL 284 (415)
T ss_pred c--------ccccCCccCCCceec----HHHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCCCCCccccchHHHhhHHHHH
Confidence 1 21111111 112 23455567788888899864444333322 2233345667889999999999
Q ss_pred hhhcCCCCCCcC
Q 042620 318 CGLIGLPPSNGV 329 (392)
Q Consensus 318 ~sllGLPw~~ga 329 (392)
+|++|-.+..+.
T Consensus 285 aglfG~~p~t~~ 296 (415)
T TIGR00801 285 AGLFGGFPNTTF 296 (415)
T ss_pred HHhcCCCCCcch
Confidence 999998776554
No 9
>PRK11412 putative uracil/xanthine transporter; Provisional
Probab=95.94 E-value=1.8 Score=45.47 Aligned_cols=271 Identities=16% Similarity=0.150 Sum_probs=144.9
Q ss_pred HHHHHHhhhhhHHHhhcccccccCC-ccchhHHHHhhhhhHHHHHhhcCcceeeeccCchhHHHHHHHHHhhcccccccc
Q 042620 12 TTYIFFASALPVIAFGEQHAKDTDG-SLSTVETLSSTALCGIVHSVLGGQPLLILGVAEPTVLMYTYLYNFAKDREDLGQ 90 (392)
Q Consensus 12 ~~flyFa~l~PaIaFG~ll~~~T~~-~igv~E~lls~ai~Giifslf~GQPL~Ilg~TGP~~vf~~~ly~~~~~~~~~~~ 90 (392)
.+++|-.+++|-+..+..++-..+. ..=++-+++.++++.++.+.++..=.++.|+++. |...+..+|......|
T Consensus 18 vl~m~~~~i~vPliva~a~gl~~~~~~~li~~~l~~sGIaTllQ~~~G~rlPiv~G~Sf~---~~~~~~~i~~~~~~~g- 93 (433)
T PRK11412 18 FFFIFCNTVVVPPTLLSAFQLPQSSLLTLTQYAFLATALACFAQAFCGHRRAIMEGPGGL---WWGTILTITLGEASRG- 93 (433)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeeCCchH---HHHHHHHHHhcccccC-
Confidence 4677778899988888776543322 2334577889999999999998877777787764 4344555563221011
Q ss_pred chh-hhHH--HHHHHHHHHHHHHHHHhh-cccchhhhccchhhHHHHHHHHHHHHHHHHHhhhc-cccCCCCCCCccccc
Q 042620 91 KVY-LAWA--GWVCVWTSLMLFLLAIFN-ACDLINRFTRIAGELFGMLIAVLFLQEAIKGMVSE-FKIPKAEDSSSEKYQ 165 (392)
Q Consensus 91 ~~f-l~~~--~WvgiW~~~~~~i~a~~~-as~lv~y~TRFTeEiF~~lIs~iFi~eai~~l~~~-f~~~~~~~~~~~~~~ 165 (392)
.++ --+. .+--+=.+++.++++.++ -..+.|+++--.--..=++|.+-.+--+++.+... +.. .+++.
T Consensus 94 ~~~~~~~g~l~g~~i~~g~~~~~lg~~~~~~~l~r~fpPvV~G~vv~lIGlsL~~~a~~~~~G~~~~~-------~~~~~ 166 (433)
T PRK11412 94 TPINDIATSLAVGIALSGVVTILIGFSGLGHRLARLFTPMVMVVFMLLLGAQLTTIFFKGMLGLPFGI-------ADPNG 166 (433)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhhHhHHHHHHhhHHHHHHHhcCCCccC-------ccccc
Confidence 112 0111 222344455555555554 23334444444444555667777777888776432 110 00110
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhhcccccccccCcccchhhcchhhHHHHHHHHhhcc-ccCccCCCCCCccccCCCCC
Q 042620 166 FHWPYTNGLLGIIFTSGLVCTAIKSRKTRSWWYGTGWFRSFIADYGVPLMVLVWSALSF-SVPSKVPSGVPRRLFSPLPW 244 (392)
Q Consensus 166 ~~~~~~~~l~sliL~~gtf~~a~~l~~fr~s~f~~~~vR~~isDfgv~iaV~~~t~~~y-~~~~~vp~~~~~~l~~~~~~ 244 (392)
++ .+..+.+++.|+...+.+.. .-|++++.|++.+++++-..+.. ..+.|.. . .
T Consensus 167 -~~----~~~~~~~a~~~l~~il~~~~---------~~~g~~~~~svLiGiv~G~v~a~~~~g~d~~-~------v---- 221 (433)
T PRK11412 167 -KI----QLPPFGLSVAVMCLVLAMII---------FLPQRIARYSLLVGTIVGWILWAFCFPSSHS-L------S---- 221 (433)
T ss_pred -cc----chHHHHHHHHHHHHHHHHHH---------HhhhHHHHHHHHHHHHHHHHHHHHHhCCCcc-h------h----
Confidence 11 12224444444444333322 22556777899999998777632 2221110 0 0
Q ss_pred CCCCCCCceEecCCCCccH-HHHHHHHHHHHHHHHHhhh----chhhHHHHhhccccCCCCCCccchhhHHHHHHhhhhh
Q 042620 245 ESASLDHWSVIKDMGKVPV-AYIFAAFIPAVMIAGLYFF----DHSVASQLAQQKEFNLKKPSAYHYDTFLLGFMTLACG 319 (392)
Q Consensus 245 ~~~~~r~W~v~~~~~~~p~-~~i~~A~~PA~ll~iL~Fm----D~nIts~ivn~~e~kLkKg~gyHlDLlllgi~~~v~s 319 (392)
..-.|... |++ .|. . -+.++++.+++++.-.+ |+..++.+.+++. .|...++=-+..=|+-+.++|
T Consensus 222 ---~~a~w~~~-pfG-~P~~F-~~~~il~~~~~~lv~~~e~iG~~~a~~~~~~~~~---~~~~~l~rgi~~dGi~s~lag 292 (433)
T PRK11412 222 ---GELHWQWF-PLG-SGGAL-EPGIILTAVITGLVNISNTYGAIRGTDVFYPQQG---AGNTRYRRSFVATGFMTLITV 292 (433)
T ss_pred ---ccCCceee-cCC-CCCcc-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC---CCCcccccchhhccHHHHHHH
Confidence 01124321 222 221 1 12334455444444433 5667777766542 223355556677799999999
Q ss_pred hcCCCCCC
Q 042620 320 LIGLPPSN 327 (392)
Q Consensus 320 llGLPw~~ 327 (392)
++|-++..
T Consensus 293 lfg~~p~t 300 (433)
T PRK11412 293 PLAVIPFS 300 (433)
T ss_pred hcCCCCCC
Confidence 99988763
No 10
>KOG0236 consensus Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [Inorganic ion transport and metabolism]
Probab=95.59 E-value=0.77 Score=50.71 Aligned_cols=268 Identities=15% Similarity=0.157 Sum_probs=145.7
Q ss_pred chhHHHHhhhhhHHHHHhhcCcceeeeccCchhHHHHHH-HHHhhccccc-cccchhhhHHHHHHHHHHHHHHHHHHhhc
Q 042620 39 STVETLSSTALCGIVHSVLGGQPLLILGVAEPTVLMYTY-LYNFAKDRED-LGQKVYLAWAGWVCVWTSLMLFLLAIFNA 116 (392)
Q Consensus 39 gv~E~lls~ai~Giifslf~GQPL~Ilg~TGP~~vf~~~-ly~~~~~~~~-~~~~~fl~~~~WvgiW~~~~~~i~a~~~a 116 (392)
-..--|-|+.+..++|++||-++=.-+|+++=+.++... +-+.+.+... .....++...+-+.+-++++-+++..+..
T Consensus 108 ppiyGLYssf~~~~iY~~fGtsr~isiG~~av~sLmv~~~v~~~v~~~~~~~~~~~~i~va~~lt~l~Giiq~~mG~lrL 187 (665)
T KOG0236|consen 108 PPIYGLYSSFFPPLIYAIFGTSRHVSIGPFAVVSLMVGTVVSQVVLSEAPSNDIATTIQVATTLTFLTGIIQLILGLLRL 187 (665)
T ss_pred ChHHHHHHHHHHHHHheeccCCCcccccHHHHHHHHHHHHHHHHHhccCCCcCcchhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 344446688899999999999998888766655554431 2244443220 00135778888899999999999999999
Q ss_pred ccchhhhccchhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCCcccc---c---cccc-chhHHHHHHHHHHHHHHHHh
Q 042620 117 CDLINRFTRIAGELFGMLIAVLFLQEAIKGMVSEFKIPKAEDSSSEKY---Q---FHWP-YTNGLLGIIFTSGLVCTAIK 189 (392)
Q Consensus 117 s~lv~y~TRFTeEiF~~lIs~iFi~eai~~l~~~f~~~~~~~~~~~~~---~---~~~~-~~~~l~sliL~~gtf~~a~~ 189 (392)
-++++|+.+-.=--|..=.|+.-+..-+|.+...-+.+.+.++...-+ + ..+. ..+..++++. ..+....+
T Consensus 188 Gfl~~~lS~~~l~GFt~gaa~~I~~sQlk~llGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--l~~L~~~k 265 (665)
T KOG0236|consen 188 GFLVRFLSEPALSGFTTGAALHIVTSQLKVLLGITSFPRHSGPGSIVFIVFDLLANLPKTLATLVLSLIF--LVVLLLTK 265 (665)
T ss_pred ChHHHHccHHHHhHhhhhhhhhhhHHhhHhhccccccCCCCCceeEEEeeHHhhhcccccchhhhhHHHH--HHHHHHHH
Confidence 999999997555555555666666677777765432332222211100 0 0010 1122222221 11222222
Q ss_pred --hccccccccc-CcccchhhcchhhHHHHHHHHhhccccCccCCCCCCccc-cCCCCCCCCCCCCceEecCCCCccHHH
Q 042620 190 --SRKTRSWWYG-TGWFRSFIADYGVPLMVLVWSALSFSVPSKVPSGVPRRL-FSPLPWESASLDHWSVIKDMGKVPVAY 265 (392)
Q Consensus 190 --l~~fr~s~f~-~~~vR~~isDfgv~iaV~~~t~~~y~~~~~vp~~~~~~l-~~~~~~~~~~~r~W~v~~~~~~~p~~~ 265 (392)
.+++| ++++ -.-.|+ .+.|++.|.+.|....+-. ..+... ..|..+. --.+|...
T Consensus 266 ~~~~~~~-~k~~~v~~~~~-------li~vIi~T~~~~~~~~~~~-~~~~~~~~i~~g~~------------~~~lp~~~ 324 (665)
T KOG0236|consen 266 ELNPKFK-KKLFSVPIPFE-------LIVVIIGTLISYIFRLEGR-YGPIIVGEIPRGFP------------PPSLPPLS 324 (665)
T ss_pred Hhhhhhc-ccceeecccHH-------HHHHHHHHHHHHHhccccc-cCCeeeccCCCCCC------------CCCCCChh
Confidence 11122 1111 112222 4788888988887643211 111111 1222111 11122111
Q ss_pred HHHHHHH-HHHHHHHhhhch-hhHHHHhhccccCCCCCCccchhhHHHHHHhhhhhhcCCCCCCcCCCCCC
Q 042620 266 IFAAFIP-AVMIAGLYFFDH-SVASQLAQQKEFNLKKPSAYHYDTFLLGFMTLACGLIGLPPSNGVLLPQS 334 (392)
Q Consensus 266 i~~A~~P-A~ll~iL~FmD~-nIts~ivn~~e~kLkKg~gyHlDLlllgi~~~v~sllGLPw~~ga~~p~S 334 (392)
......+ ++.+++.-+.++ +|....+.+++++.. -+-+|+.+|++|+++|++|.=+..|+ .-||
T Consensus 325 ~~~~~~~~~~~i~iva~~~~iai~k~fa~~~~y~vd----~nqELiAlG~~Ni~sSff~~~p~tgs-~sRS 390 (665)
T KOG0236|consen 325 LTPQVIPDAFAIAIVALLEHIAIGKSFASLHGYKVD----SNQELIALGISNILSSFFGCYPTTGS-FSRS 390 (665)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCeeC----CChHHHHHHHHHHhhhhhceEcccch-hhHH
Confidence 2223344 555666666665 344455544433332 35789999999999999997666666 4343
No 11
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related. These proteins are: Neurospora crassa sulphate permease II (gene cys-14). Yeast sulphate permeases (genes SUL1 and SUL2). Rat sulphate anion transporter 1 (SAT-1). Mammalian DTDST, a probable sulphate transporter which, in human, is involved in the genetic disease, diastrophic dysplasia (DTD). Sulphate transporters 1, 2 and 3 from the legume Stylosanthes hamata. Human pendrin (gene PDS), which is involved in a number of hearing loss genetic diseases. Human protein DRA (Down-Regulated in Adenoma). Soybean early nodulin 70. Escherichia coli hypothetical protein ychM. Caenorhabditis elegans hypothetical protein F41D9.5. These proteins are highly hydrophobic and seem to contain about 12 transmembrane domains.; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=95.11 E-value=0.072 Score=51.42 Aligned_cols=204 Identities=15% Similarity=0.143 Sum_probs=107.1
Q ss_pred hhcccchhhhccchhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCCcccccccc-cchh--HHHHHHHHHHHHHHHHhh
Q 042620 114 FNACDLINRFTRIAGELFGMLIAVLFLQEAIKGMVSEFKIPKAEDSSSEKYQFHW-PYTN--GLLGIIFTSGLVCTAIKS 190 (392)
Q Consensus 114 ~~as~lv~y~TRFTeEiF~~lIs~iFi~eai~~l~~~f~~~~~~~~~~~~~~~~~-~~~~--~l~sliL~~gtf~~a~~l 190 (392)
+...++++|+.+-.=.-|..=++++.+...++.+...=..+.+++.. .....-+ ...+ ...+.++...++..-...
T Consensus 4 lrlG~l~~~ip~pVi~Gf~~g~ai~I~~~Ql~~~~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 82 (280)
T PF00916_consen 4 LRLGFLVRFIPRPVISGFLAGIAILIIFSQLPNLLGIPVVPSHEGLF-SFIRALFQLISTITNWPTLAIGLVALVFLLII 82 (280)
T ss_pred ccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccc-chhhhhhhhhhhccchhhhhhhhHHHHHHhhh
Confidence 45567788888877778888889999999999887632111111110 0000000 0001 122333333333222222
Q ss_pred cccccccccCcccchhhcchhhHHHHHHHHhhccccCccCC-----CCCCccccCCCCCCCCCCCCceEecCCCCccHHH
Q 042620 191 RKTRSWWYGTGWFRSFIADYGVPLMVLVWSALSFSVPSKVP-----SGVPRRLFSPLPWESASLDHWSVIKDMGKVPVAY 265 (392)
Q Consensus 191 ~~fr~s~f~~~~vR~~isDfgv~iaV~~~t~~~y~~~~~vp-----~~~~~~l~~~~~~~~~~~r~W~v~~~~~~~p~~~ 265 (392)
+..++ ++-.+..+.+- +..+++++.+.+++....+.. ..++..+ |.+.-| + .+.++..
T Consensus 83 ~~~~~-~~~~~~~~~~p---~~li~vv~~~~~~~~~~~~~~~v~~~~~i~~~l--p~~~~p----------~-~~~~~~~ 145 (280)
T PF00916_consen 83 RLLPK-RLPSRFWPPIP---APLIVVVLGTLLSWLFLLDKYGVAIVGEIPSGL--PPPSLP----------S-FDISWSL 145 (280)
T ss_pred hhhhh-hcccccccccc---ccceeeehhhhhhhhhhhccccccccccccccC--ccccCc----------c-ccccccc
Confidence 22220 01011112221 223445555555544321111 0111111 111001 0 1222333
Q ss_pred HHHHHHHHHHHHHHhhhchhhHHHHhhccccCCCCCCccchhhHHHHHHhhhhhhcCCCCCCcCCCCCChhhhh
Q 042620 266 IFAAFIPAVMIAGLYFFDHSVASQLAQQKEFNLKKPSAYHYDTFLLGFMTLACGLIGLPPSNGVLLPQSPMHTK 339 (392)
Q Consensus 266 i~~A~~PA~ll~iL~FmD~nIts~ivn~~e~kLkKg~gyHlDLlllgi~~~v~sllGLPw~~ga~~p~S~~H~~ 339 (392)
+...+..|+.++++-++|+-.++....++. ++..-.+-+|.-+|+.|+++|++|--+.++. .-||..+.+
T Consensus 146 ~~~~~~~a~~ia~v~~~~s~~~~~~~~~~~---~~~~d~n~El~a~G~aNi~s~~~gg~p~~~s-~srs~~~~~ 215 (280)
T PF00916_consen 146 ILDLLPTALAIAIVGFIESLLIAKSIAKKT---GYRIDPNQELIALGLANIVSGLFGGMPGSGS-FSRSAVNYR 215 (280)
T ss_pred ccccchhHHHHHHHHHHHHHHhhhhhcccc---cccCCcHHHHHHhhhccccchhhcccccccc-cccchHHHh
Confidence 344566788999999999988777765543 4555788999999999999999998888888 888776654
No 12
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=94.90 E-value=1.3 Score=45.45 Aligned_cols=272 Identities=13% Similarity=0.177 Sum_probs=128.1
Q ss_pred HHHHHHhhhhhHHHhhcccccccCCccchhHHHHhhhhhHHHHHhhcCcceeeeccCchhHHHHHHHHHhhccc-ccccc
Q 042620 12 TTYIFFASALPVIAFGEQHAKDTDGSLSTVETLSSTALCGIVHSVLGGQPLLILGVAEPTVLMYTYLYNFAKDR-EDLGQ 90 (392)
Q Consensus 12 ~~flyFa~l~PaIaFG~ll~~~T~~~igv~E~lls~ai~Giifslf~GQPL~Ilg~TGP~~vf~~~ly~~~~~~-~~~~~ 90 (392)
++.++-..+.+.+..+..++...+-..=++-+++.++++-+++++..|-|+-+.=-.+-..+. .+...... +. .
T Consensus 11 ~l~m~~~~iv~P~il~~~~g~~~~~~~li~at~l~sgi~Tllq~~~~g~~lpl~~G~s~~~~~---~~~~~~g~~~~-~- 85 (389)
T PF00860_consen 11 FLAMFYIIIVVPLILAAAFGLDADTAALISATFLVSGIATLLQGLPAGHRLPLVPGPSFAFIF---AFMIVIGMAES-G- 85 (389)
T ss_dssp HHHHHHHHHHHHHTTTS-----------HHHHHHHHHHHHHHHHHHTTT-----EEE-GGGHH---HHHGGG------H-
T ss_pred HHHHHHHHHHhHHHHhhcccccchhhHHHHHHHHHHHHHHHHHHhcCCCceecccccchhhhh---hhhcccccccc-h-
Confidence 344444455555555554432122224457789999999999999888888776544433333 22222211 00 0
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHhhcc-cchhhhccchhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCCccccccccc
Q 042620 91 KVYLAWAGWVCVWTSLMLFLLAIFNAC-DLINRFTRIAGELFGMLIAVLFLQEAIKGMVSEFKIPKAEDSSSEKYQFHWP 169 (392)
Q Consensus 91 ~~fl~~~~WvgiW~~~~~~i~a~~~as-~lv~y~TRFTeEiF~~lIs~iFi~eai~~l~~~f~~~~~~~~~~~~~~~~~~ 169 (392)
..=++-..=..+..+++.++++.++.- .+.|+++.-.-.....+|.+.....+++.+...-..+ +. ..+
T Consensus 86 ~~~~~~~~g~~~i~gi~~~~l~~~g~~~~l~~~~pp~v~g~v~~~IGl~L~~~~~~~~~~~~~~~---~~--~~~----- 155 (389)
T PF00860_consen 86 GYGLQAALGAVLISGILFILLGLTGLRKRLRRLFPPVVKGAVVLLIGLSLAPIGLKNAGGIWGNP---DG--LLV----- 155 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT-SH-HHHHH--HHHHHHHHHHHHHHHHHHHHHHTTSS---B---TT---B------
T ss_pred hhchhhhhhHHHHHHHHHHHHHHhchHHHHHHHhChhheEeeEeeehhhhhhhHhhccccccccc---cc--ccc-----
Confidence 011122223557788888888888874 5667777766777888888888888888875432111 11 000
Q ss_pred chhHHHHHHHHHHHHHHHHhhcccccccccCcccchhhcchhhHHHHHHHHhhccccC-ccCCCCCCccccCCCCCCCCC
Q 042620 170 YTNGLLGIIFTSGLVCTAIKSRKTRSWWYGTGWFRSFIADYGVPLMVLVWSALSFSVP-SKVPSGVPRRLFSPLPWESAS 248 (392)
Q Consensus 170 ~~~~l~sliL~~gtf~~a~~l~~fr~s~f~~~~vR~~isDfgv~iaV~~~t~~~y~~~-~~vp~~~~~~l~~~~~~~~~~ 248 (392)
.......+.+.++.....+.. + .|+...-+++.+++++.+.+.+... .+.+... ...|
T Consensus 156 --~~~~~~~~~~~~~~~~~~~~~-----~----~~~~~~~~ailigi~~g~i~~~~~g~~~~~~~~-----~~~~----- 214 (389)
T PF00860_consen 156 --GDGKNLGLAVLTLLFILLLSL-----F----LKGFLRKGAILIGIIAGWIVAAILGVVDFSPSV-----SSAP----- 214 (389)
T ss_dssp ----HHHHHHHHHHHHHHHHHHH-----S----SSTTTTTHHHHHHHHHHHHHHHHHHHTTSSH-H-----HHS------
T ss_pred --ccccccccccccchhhhhhhh-----h----hhhhcccccchhhhhhhhhhhhcccccccCccc-----cccc-----
Confidence 001112222233333332222 1 3334445799999999888775543 1111100 1111
Q ss_pred CCCceEecCC--CCccHHHHHHHHHHHHHHHHHhhhchh----hHHHHhhccccCCCCCCccchhhHHHHHHhhhhhhcC
Q 042620 249 LDHWSVIKDM--GKVPVAYIFAAFIPAVMIAGLYFFDHS----VASQLAQQKEFNLKKPSAYHYDTFLLGFMTLACGLIG 322 (392)
Q Consensus 249 ~r~W~v~~~~--~~~p~~~i~~A~~PA~ll~iL~FmD~n----Its~ivn~~e~kLkKg~gyHlDLlllgi~~~v~sllG 322 (392)
|+-.+.. +..|. .-..++++.+.+++.-++|+- -.+.+.++++.+ ....+--+..-|+-+.++|++|
T Consensus 215 ---~~~~p~~~~~g~p~-f~~~~i~~~~~~~lv~~~es~G~~~a~~~~~~~~~~~---~~~~~r~l~~dg~~~~l~gl~G 287 (389)
T PF00860_consen 215 ---WFSLPSPFPFGWPS-FDPGAILTFLIFALVAMFESIGTIVAVARIAGKDDPR---PPRIRRGLLADGLGTILAGLFG 287 (389)
T ss_dssp ---SS---------------HHHHHHHTHHHHHHHHHHHHHHHHHHHHHTS-TCC---CCCHHHHHHHHHHHHHHHHHHT
T ss_pred ---cccccccccccccc-ccHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCCcc---chhhcccceeeeeeeeechhhc
Confidence 2211100 11111 113334444445555555542 334444444333 5667778888999999999999
Q ss_pred CCCC
Q 042620 323 LPPS 326 (392)
Q Consensus 323 LPw~ 326 (392)
-.+.
T Consensus 288 ~~~~ 291 (389)
T PF00860_consen 288 TSPT 291 (389)
T ss_dssp ---E
T ss_pred CCCC
Confidence 8553
No 13
>PRK10720 uracil transporter; Provisional
Probab=93.40 E-value=11 Score=39.42 Aligned_cols=251 Identities=17% Similarity=0.163 Sum_probs=121.0
Q ss_pred HHHHHHhhhhhHHHhhcccccccCCccchhHHHHhhhhhHHHHHhhcC-cceeeeccCchhHHHHHHHHHhhcccccccc
Q 042620 12 TTYIFFASALPVIAFGEQHAKDTDGSLSTVETLSSTALCGIVHSVLGG-QPLLILGVAEPTVLMYTYLYNFAKDREDLGQ 90 (392)
Q Consensus 12 ~~flyFa~l~PaIaFG~ll~~~T~~~igv~E~lls~ai~Giifslf~G-QPL~Ilg~TGP~~vf~~~ly~~~~~~~~~~~ 90 (392)
.+.||-++++|-+-+| ++..++++.++++-++++.+.| .=-.+.|+ .-.|...+-.... .+
T Consensus 24 vl~m~~~~i~~Pli~g----------l~~~~~l~~sGi~TliQ~~~~g~rlP~~~G~---sfa~i~~~~~~~~-~~---- 85 (428)
T PRK10720 24 LFAMFGATVLVPILFH----------INPATVLLFNGIGTLLYLFICKGKIPAYLGS---SFAFISPVLLLLP-LG---- 85 (428)
T ss_pred HHHHHHHHHHHHhhcC----------CCHHHHHHHHHHHHHHHHHhccCccceEEeC---cHHHHHHHHHHHH-cc----
Confidence 3567888888888774 3345689999999999998775 33334443 3344333333332 11
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHhh----cccchhhhccchhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCCcccccc
Q 042620 91 KVYLAWAGWVCVWTSLMLFLLAIFN----ACDLINRFTRIAGELFGMLIAVLFLQEAIKGMVSEFKIPKAEDSSSEKYQF 166 (392)
Q Consensus 91 ~~fl~~~~WvgiW~~~~~~i~a~~~----as~lv~y~TRFTeEiF~~lIs~iFi~eai~~l~~~f~~~~~~~~~~~~~~~ 166 (392)
++.. .=.-++++++.++++.+- ...+.|+++.-.--.|-++|.+--.--+++.. .. .+. +. .+
T Consensus 86 ~~~~---lgav~v~Glv~ills~~~~~~g~~~l~~~fPp~v~G~~i~lIGl~L~~~~~~~~-g~--~~~--~~---~~-- 152 (428)
T PRK10720 86 YEVA---LGGFIMCGVLFCLVALIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMA-GL--LPA--EG---QT-- 152 (428)
T ss_pred HHHH---HHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChHHHHHHHHHHHHHhHHHHHhhc-cc--cCC--CC---cc--
Confidence 1222 224566667767776652 11334445443333333334433333333211 00 000 00 00
Q ss_pred cccchhHHHHHHHHHHHHHHHHhhcccccccccCcccchhhcchhhHHHHHHHHhhccccCc-cCCCCCCccccCCCCCC
Q 042620 167 HWPYTNGLLGIIFTSGLVCTAIKSRKTRSWWYGTGWFRSFIADYGVPLMVLVWSALSFSVPS-KVPSGVPRRLFSPLPWE 245 (392)
Q Consensus 167 ~~~~~~~l~sliL~~gtf~~a~~l~~fr~s~f~~~~vR~~isDfgv~iaV~~~t~~~y~~~~-~vp~~~~~~l~~~~~~~ 245 (392)
... ..+.+++.++.+.....+ + .|+...-+++.+++++.+.+.+..+. +.+ .+. ..+
T Consensus 153 -~~~----~~~~lalv~l~iil~~~~-----~----~kg~~~~~~iLigIvvG~ila~~lG~~d~~-~v~-----~a~-- 210 (428)
T PRK10720 153 -PDS----KTIIISMVTLAVTVLGSV-----L----FRGFLAIIPILIGVLVGYALSFAMGMVDTT-PII-----EAH-- 210 (428)
T ss_pred -cch----HHHHHHHHHHHHHHHHHH-----H----hccHHHHhHHHHHHHHHHHHHHHhcCCCHH-Hhh-----cCc--
Confidence 011 124444444444433211 1 22234445688999998888766532 111 010 011
Q ss_pred CCCCCCceEecCCC--CccHHHHHHHHHHHHHHHHHhhhchhhHHHHh--hccccCCCCCCccchhhHHHHHHhhhhhhc
Q 042620 246 SASLDHWSVIKDMG--KVPVAYIFAAFIPAVMIAGLYFFDHSVASQLA--QQKEFNLKKPSAYHYDTFLLGFMTLACGLI 321 (392)
Q Consensus 246 ~~~~r~W~v~~~~~--~~p~~~i~~A~~PA~ll~iL~FmD~nIts~iv--n~~e~kLkKg~gyHlDLlllgi~~~v~sll 321 (392)
|+-.+++. ++.+.. ...+.|..+ ..++|+ +....+ +..+.+..|....+=+++.-|+-|.++|++
T Consensus 211 ------~~~lP~~~~P~fd~~~-il~l~~~~l---v~~~Es-iG~~~a~~~~~~~~~~~~~~~~r~l~adGlatii~glf 279 (428)
T PRK10720 211 ------WFALPTFYTPRFEWFA-ILTILPAAL---VVIAEH-VGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVISGFF 279 (428)
T ss_pred ------cccCCCCCCCcCcHHH-HHHHHHHHH---HHHHHH-HHHHHHHHHhhCCCCCCCccccchHhhhhHHHHHHHhc
Confidence 11111111 122222 224444333 234555 222221 111223323456788999999999999999
Q ss_pred CCCCC
Q 042620 322 GLPPS 326 (392)
Q Consensus 322 GLPw~ 326 (392)
|-++.
T Consensus 280 G~~p~ 284 (428)
T PRK10720 280 GSTPN 284 (428)
T ss_pred CCCCc
Confidence 98854
No 14
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=92.47 E-value=8.6 Score=40.79 Aligned_cols=269 Identities=14% Similarity=0.142 Sum_probs=151.1
Q ss_pred HHHHHHhhhhhHHHhhcccccc-cCCccchhHHHHhhhhhHHHHHhhcC----cceeeeccCchhHHHHHHHHHhhcccc
Q 042620 12 TTYIFFASALPVIAFGEQHAKD-TDGSLSTVETLSSTALCGIVHSVLGG----QPLLILGVAEPTVLMYTYLYNFAKDRE 86 (392)
Q Consensus 12 ~~flyFa~l~PaIaFG~ll~~~-T~~~igv~E~lls~ai~Giifslf~G----QPL~Ilg~TGP~~vf~~~ly~~~~~~~ 86 (392)
.+.||-+.+++-+.-|..++-. .+-.+=++-.++.++++-+++++--+ |=..++|++- .|...+-...+..+
T Consensus 26 ~lamfg~~V~VPlivg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sF---afi~p~i~~~~~~g 102 (451)
T COG2233 26 LLAMFGATVLVPLLVGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSF---AFVAPMIAIGGTTG 102 (451)
T ss_pred HHHHHhcchHhhHHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechH---HHHHHHHHHHhccC
Confidence 5678999999999988776533 22233345678999999999998444 6667777653 33333333333321
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHhhcc-cchhhhccchhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCCccccc
Q 042620 87 DLGQKVYLAWAGWVCVWTSLMLFLLAIFNAC-DLINRFTRIAGELFGMLIAVLFLQEAIKGMVSEFKIPKAEDSSSEKYQ 165 (392)
Q Consensus 87 ~~~~~~fl~~~~WvgiW~~~~~~i~a~~~as-~lv~y~TRFTeEiF~~lIs~iFi~eai~~l~~~f~~~~~~~~~~~~~~ 165 (392)
+ + .. ....|+-.+.++.++...=.. ++.|.++-----..-++|.+-.+.-|++..........+ + ++
T Consensus 103 ~-~-~~----~~~G~ii~ag~~~~li~~~~~~~l~rlfPPvVtG~Vi~~IGlsL~~vai~~~~G~~~~~~~--~---~~- 170 (451)
T COG2233 103 D-G-IA----ALLGGIIAAGLVYFLISPIVKIRLARLFPPVVTGPVVLVIGLSLAPVAINMAGGGPGAAGN--P---DF- 170 (451)
T ss_pred C-c-hH----HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeEeeeehhhhHHHHHHHhhCCCCCCCC--c---cc-
Confidence 0 0 00 123444444444444333333 555555555555566677777777777776543211100 0 00
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhhcccccccccCcccchhhcchhhHHHHHHHHhhccccCccCCCCCCccccCCCCCC
Q 042620 166 FHWPYTNGLLGIIFTSGLVCTAIKSRKTRSWWYGTGWFRSFIADYGVPLMVLVWSALSFSVPSKVPSGVPRRLFSPLPWE 245 (392)
Q Consensus 166 ~~~~~~~~l~sliL~~gtf~~a~~l~~fr~s~f~~~~vR~~isDfgv~iaV~~~t~~~y~~~~~vp~~~~~~l~~~~~~~ 245 (392)
-..-.+.+++.|+.+..... +|+++.+|+ +++.+++++-..+.+..+ .+.- +
T Consensus 171 ------~~~~~l~la~~tl~~il~~~-----~f~~g~~~~----i~ILiGlv~G~~la~~~G-~vdf------------~ 222 (451)
T COG2233 171 ------GSLENLGLALVTLLIILLIN-----RFGKGFLRR----IPILIGLVVGYLLALFMG-MVDF------------S 222 (451)
T ss_pred ------CchhHHHHHHHHHHHHHHHH-----HHhhhHHHH----HHHHHHHHHHHHHHHHhC-CcCc------------c
Confidence 01234667777776665543 354455555 488888888877776654 1211 0
Q ss_pred CCCCCCceEecCCCCccHHHHHHHHHHHHHHHHHhhhchh----hHHHHhhccccCCCCCCccchhhHHHHHHhhhhhhc
Q 042620 246 SASLDHWSVIKDMGKVPVAYIFAAFIPAVMIAGLYFFDHS----VASQLAQQKEFNLKKPSAYHYDTFLLGFMTLACGLI 321 (392)
Q Consensus 246 ~~~~r~W~v~~~~~~~p~~~i~~A~~PA~ll~iL~FmD~n----Its~ivn~~e~kLkKg~gyHlDLlllgi~~~v~sll 321 (392)
+-....|+-.+.....-...-+.|+++.+.+++.-..||- .++.+.+|+ +.|-.++|=-++-=|+.+.+.|++
T Consensus 223 ~v~~a~w~~~P~~~~fg~~F~~~ail~m~~v~iV~~~E~~G~i~A~~~itg~~---~~~~~~l~rg~~aDGlat~iag~f 299 (451)
T COG2233 223 GVAEAPWFALPTPFYFGMAFDWGAILTMLPVAIVTIVEHTGDITATGEITGRD---LDGKPRLRRGLLADGLATLIAGLF 299 (451)
T ss_pred ccccCceeeCCcccCCCeeecHHHHHHHHHHHHHHHHHHhhhhhhHHhHhCCc---CccCcccccceeeccHHHHHHHhc
Confidence 0012234443322210001124566666667777777663 455555553 444566777777789999999999
Q ss_pred CCCCC
Q 042620 322 GLPPS 326 (392)
Q Consensus 322 GLPw~ 326 (392)
|=|+.
T Consensus 300 g~~p~ 304 (451)
T COG2233 300 GGFPN 304 (451)
T ss_pred CCCCC
Confidence 98885
No 15
>TIGR03616 RutG pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).
Probab=84.97 E-value=54 Score=34.38 Aligned_cols=120 Identities=14% Similarity=0.138 Sum_probs=66.9
Q ss_pred HHHHHHhhhhhHHHhhcccccccCCccchhHHHHhhhhhHHHHHhh--cCcceeeeccCchhHHHHHHHHHhhccccccc
Q 042620 12 TTYIFFASALPVIAFGEQHAKDTDGSLSTVETLSSTALCGIVHSVL--GGQPLLILGVAEPTVLMYTYLYNFAKDREDLG 89 (392)
Q Consensus 12 ~~flyFa~l~PaIaFG~ll~~~T~~~igv~E~lls~ai~Giifslf--~GQPL~Ilg~TGP~~vf~~~ly~~~~~~~~~~ 89 (392)
.+.||-..++|-+-.| ++..++++.++++-++++.. ++-|... |++ ..|...+-..+...+ .+
T Consensus 40 ~lam~~~~v~~Plilg----------l~~~~tl~~sGi~TllQ~~~~G~rlP~v~-G~s---f~f~~~~~~~~~~~~-~~ 104 (429)
T TIGR03616 40 AVAMFGATVLMPLLMG----------FDPNLTILMSGIGTLLFFLITGGRVPSYL-GSS---AAFVGAVIAATGYNG-QG 104 (429)
T ss_pred HHHHHHHHHHHHHHhC----------CCHhHHHHHHHHHHHHHHHHhCCCceeEE-cCc---HHHHHHHHHHHhhcc-cC
Confidence 4556666666666554 22236899999999999864 6666644 544 344444333321110 01
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHhhcccchhhhcc-chhhHHHHH---HHHHHHHHHHHH
Q 042620 90 QKVYLAWAGWVCVWTSLMLFLLAIFNACDLINRFTR-IAGELFGML---IAVLFLQEAIKG 146 (392)
Q Consensus 90 ~~~fl~~~~WvgiW~~~~~~i~a~~~as~lv~y~TR-FTeEiF~~l---Is~iFi~eai~~ 146 (392)
..++++-..-..+-++++.++++.+......+++.| |+..+=+.. |.+-.+.-+++.
T Consensus 105 ~~~~~~~a~ga~iv~G~i~~llg~~~~~~~~~~l~r~fpPvV~G~vv~lIGlsL~~vg~~~ 165 (429)
T TIGR03616 105 TNPNIALALGGIIACGLVYAAIGLVVMRTGTRWIERLMPPVVTGAVVMAIGLNLAPIAVKS 165 (429)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHh
Confidence 123566666677777788777777654333455555 445544444 444444444443
No 16
>PF13792 Sulfate_tra_GLY: Sulfate transporter N-terminal domain with GLY motif
Probab=57.63 E-value=6.7 Score=32.05 Aligned_cols=47 Identities=13% Similarity=0.268 Sum_probs=36.1
Q ss_pred hHHHhhcccccccCCccchhHHHHhhhhhHHHHHhhcCcceeeeccCchhHHH
Q 042620 22 PVIAFGEQHAKDTDGSLSTVETLSSTALCGIVHSVLGGQPLLILGVAEPTVLM 74 (392)
Q Consensus 22 PaIaFG~ll~~~T~~~igv~E~lls~ai~Giifslf~GQPL~Ilg~TGP~~vf 74 (392)
=+++|+.+-+ +...--+.++.+.+++|++|++-|..++|+|+-+.+.
T Consensus 33 q~~a~A~lAg------~pp~~GLy~a~~~~liyalfG~s~~~~~Gp~a~~s~l 79 (84)
T PF13792_consen 33 QGMAYALLAG------VPPIYGLYAAIIPPLIYALFGSSRHMIVGPTAAMSLL 79 (84)
T ss_pred HHHHHHHHcC------CCCCeeeHHHHHHHHHHhhccCCCccccChHHHHHHH
Confidence 3677775543 3333447788999999999999999999999887764
No 17
>PF12075 KN_motif: KN motif; InterPro: IPR021939 This small motif is found at the N terminus of Kank proteins and has been called the KN (for Kank N-terminal) motif. This protein is found in eukaryotes. Proteins in this family are typically between 413 to 1202 amino acids in length. This protein is found associated with PF00023 from PFAM. This protein has two conserved sequence motifs: TPYG and LDLDF. Kank1 was obtained by positional cloning of a tumor suppressor gene in renal cell carcinoma, while the other members were found by homology search. The family is involved in the regulation of actin polymerisation and cell motility through signaling pathways containing PI3K/Akt and/or unidentified modulators/effectors [].
Probab=46.68 E-value=8 Score=27.37 Aligned_cols=18 Identities=22% Similarity=0.586 Sum_probs=12.4
Q ss_pred CCCCCCccchhhHHHHHH
Q 042620 297 NLKKPSAYHYDTFLLGFM 314 (392)
Q Consensus 297 kLkKg~gyHlDLlllgi~ 314 (392)
-++-|-||||||=-|-.+
T Consensus 3 sv~tPYGyhiDLDFvkyv 20 (39)
T PF12075_consen 3 SVETPYGYHIDLDFVKYV 20 (39)
T ss_pred cccCCcceeecchHHHHH
Confidence 356689999998554433
No 18
>TIGR00843 benE benzoate transporter. The benzoate transporter family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter.
Probab=37.98 E-value=2.4e+02 Score=29.53 Aligned_cols=114 Identities=12% Similarity=0.203 Sum_probs=80.4
Q ss_pred hhHHHhhcccccccCCccchhHHHHhhhhhHHHHHhhcCcceeeeccCchhHHHHHHHHHhhccccccccchhhhHHHHH
Q 042620 21 LPVIAFGEQHAKDTDGSLSTVETLSSTALCGIVHSVLGGQPLLILGVAEPTVLMYTYLYNFAKDREDLGQKVYLAWAGWV 100 (392)
Q Consensus 21 ~PaIaFG~ll~~~T~~~igv~E~lls~ai~Giifslf~GQPL~Ilg~TGP~~vf~~~ly~~~~~~~~~~~~~fl~~~~Wv 100 (392)
+|.++=-...+++. -+.+.+..++++.++-+.|||-+.++=+.|. .+|...+ +..| ..=|.|-
T Consensus 241 lpgiavl~aaGy~~----p~~~~~~~tGl~sll~ApfGg~~~nlaaita----------Aic~G~~--ah~d-~~rR~~a 303 (395)
T TIGR00843 241 APGIAALKAAGYNA----PAKPIIAAAGLAALFAAFAGGISIGIAAITA----------AICMGKD--AHED-KDKRWIA 303 (395)
T ss_pred chHHHHHHHcCCCC----CchHHHHHHHHHHHHHhccCCchhhhhHHhH----------HHhcCcc--cccC-cCccchH
Confidence 34455444445544 4799999999999999999999988777543 3444432 1123 5566788
Q ss_pred HHHHHHHHHHHHHhhcccchhhhccchhhHHHHHHHHHHHHHHHHHhhhccc
Q 042620 101 CVWTSLMLFLLAIFNACDLINRFTRIAGELFGMLIAVLFLQEAIKGMVSEFK 152 (392)
Q Consensus 101 giW~~~~~~i~a~~~as~lv~y~TRFTeEiF~~lIs~iFi~eai~~l~~~f~ 152 (392)
+++++++.+++..+.+ .++..+.-+..|+-..+-.+..+--=...+..-++
T Consensus 304 ~i~~Gv~yll~glfag-~i~~l~~~~P~~li~~laGlAll~~~~~~l~~a~~ 354 (395)
T TIGR00843 304 AAAAGIFYLLAGLFAG-AITALFAALPKELIAALAGLALLGAIAGNIKIALH 354 (395)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999976 77778889999998888777655433334444444
No 19
>PF13172 PepSY_TM_1: PepSY-associated TM helix
Probab=31.03 E-value=75 Score=21.22 Aligned_cols=25 Identities=24% Similarity=0.485 Sum_probs=20.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhcc
Q 042620 93 YLAWAGWVCVWTSLMLFLLAIFNAC 117 (392)
Q Consensus 93 fl~~~~WvgiW~~~~~~i~a~~~as 117 (392)
...+.-|+|+++++++++++++++-
T Consensus 5 ~~~~H~~~g~~~~~~ll~~~lTG~~ 29 (34)
T PF13172_consen 5 WRKIHRWLGLIAAIFLLLLALTGAL 29 (34)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456679999999999999998853
No 20
>PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ]. Proteins in this family are about 400 residues in length and probably span the membrane 12 times. They exhibit about 30% identity to each other and limited sequence similarity to members of the aromatic acid:H+symporter (AAHS) family of the major facilitator superfamily (MFS). However the degree of similarity with the latter proteins is insufficient to establish homology. Thus, in spite of the sequence similarity and their similar substrate specificities, the BenE family must be considered separately. This family is classified as TC number 2.A.46 under the transporter classification (TC) system [].; GO: 0016021 integral to membrane
Probab=28.22 E-value=3.8e+02 Score=28.07 Aligned_cols=102 Identities=14% Similarity=0.229 Sum_probs=73.7
Q ss_pred ccchhHHHHhhhhhHHHHHhhcCcceeeeccCchhHHHHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHHHHHhhc
Q 042620 37 SLSTVETLSSTALCGIVHSVLGGQPLLILGVAEPTVLMYTYLYNFAKDREDLGQKVYLAWAGWVCVWTSLMLFLLAIFNA 116 (392)
Q Consensus 37 ~igv~E~lls~ai~Giifslf~GQPL~Ilg~TGP~~vf~~~ly~~~~~~~~~~~~~fl~~~~WvgiW~~~~~~i~a~~~a 116 (392)
+--+...+..|++..++.+.|||.+.++=+. .-.+|.+.|- .+=-.=|-+-++|++++-+++..+.
T Consensus 237 ~~p~~~~~~~tGl~s~l~ApfGg~~~nlAai----------taAIc~g~ea---h~dp~rRy~Aav~~Gv~yll~Gl~a- 302 (378)
T PF03594_consen 237 QPPVNPLITVTGLASLLAAPFGGHAVNLAAI----------TAAICAGPEA---HPDPSRRYIAAVAAGVFYLLFGLFA- 302 (378)
T ss_pred CCCchHHHHHHHHHHHHHhhhchhhhHHHHH----------HHHHHcCCcc---CCCcccchHHHHHHhHHHHHHHHHH-
Confidence 4567889999999999999999999998874 4466775431 1112335578999999988888775
Q ss_pred ccchhhhccchhhHHHHHHHHHHHHHHHHHhhhccc
Q 042620 117 CDLINRFTRIAGELFGMLIAVLFLQEAIKGMVSEFK 152 (392)
Q Consensus 117 s~lv~y~TRFTeEiF~~lIs~iFi~eai~~l~~~f~ 152 (392)
..++..++.+..|.-..+-.+..+--=...+..-|+
T Consensus 303 ~~~v~l~~~lP~~li~~lAGLALlg~l~~sl~~A~~ 338 (378)
T PF03594_consen 303 AALVALFAALPPALIAALAGLALLGTLGGSLQTAFS 338 (378)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 556788999999998888777655333333433343
No 21
>PF02109 DAD: DAD family; InterPro: IPR003038 Members of this family are thought to be integral membrane proteins. Some members of this family have been shown to cause apoptosis if mutated [], these proteins are known as DAD for defender against death. The family also includes the epsilon subunit of the oligosaccharyltransferase that is involved in N-linked glycosylation [].; GO: 0016021 integral to membrane
Probab=27.69 E-value=2.5e+02 Score=24.37 Aligned_cols=54 Identities=19% Similarity=0.097 Sum_probs=36.3
Q ss_pred hHHHHHHHHHHHHHHHHhhccccc----ccccCcccchhhcchhhHHHHHHHHhhccc
Q 042620 172 NGLLGIIFTSGLVCTAIKSRKTRS----WWYGTGWFRSFIADYGVPLMVLVWSALSFS 225 (392)
Q Consensus 172 ~~l~sliL~~gtf~~a~~l~~fr~----s~f~~~~vR~~isDfgv~iaV~~~t~~~y~ 225 (392)
.-+-+++.+.|.|.++..||.--+ +.|.+-+--|..+||-..--|+-...++++
T Consensus 54 aFLsGf~s~VG~fVL~vsLR~Q~~p~n~~~f~~is~eRafaDfv~~slvLh~~v~nFi 111 (112)
T PF02109_consen 54 AFLSGFISCVGQFVLTVSLRIQLNPENKSEFPGISPERAFADFVFCSLVLHFVVFNFI 111 (112)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccccccCCCChhhhhHHHHHHHHHHHHheeecc
Confidence 345567778899888877765333 556666777889999766666555555543
No 22
>PRK14751 tetracycline resistance determinant leader peptide; Provisional
Probab=27.45 E-value=20 Score=23.24 Aligned_cols=9 Identities=44% Similarity=0.951 Sum_probs=7.2
Q ss_pred CccchhhHH
Q 042620 302 SAYHYDTFL 310 (392)
Q Consensus 302 ~gyHlDLll 310 (392)
+=||||++.
T Consensus 16 si~hwdf~~ 24 (28)
T PRK14751 16 SIYHWDFYA 24 (28)
T ss_pred ceeeeeehh
Confidence 579999875
No 23
>PF12036 DUF3522: Protein of unknown function (DUF3522); InterPro: IPR021910 This family of proteins is functionally uncharacterised. This protein is found in eukaryotes. Proteins in this family are typically between 220 to 787 amino acids in length.
Probab=20.98 E-value=6.7e+02 Score=23.21 Aligned_cols=20 Identities=15% Similarity=-0.046 Sum_probs=11.1
Q ss_pred HHHhhcccccccccCcccch
Q 042620 186 TAIKSRKTRSWWYGTGWFRS 205 (392)
Q Consensus 186 ~a~~l~~fr~s~f~~~~vR~ 205 (392)
..+..|..|+.++.+++.++
T Consensus 132 ~~w~~r~~~~~~~~~~~~~~ 151 (186)
T PF12036_consen 132 VSWLYRCRRRRRCYPPSWRR 151 (186)
T ss_pred HHHheecccCCccCChHHHH
Confidence 34445545556676666553
No 24
>PF13214 DUF4022: Protein of unknown function (DUF4022)
Probab=20.92 E-value=57 Score=25.94 Aligned_cols=29 Identities=24% Similarity=0.496 Sum_probs=26.9
Q ss_pred ccCCCCCCccchhhHHHHHHhhhhhhcCC
Q 042620 295 EFNLKKPSAYHYDTFLLGFMTLACGLIGL 323 (392)
Q Consensus 295 e~kLkKg~gyHlDLlllgi~~~v~sllGL 323 (392)
.+.-||+.|-.+--+.+..+.+-||++||
T Consensus 41 sygwkksngiky~cl~~slllgt~silgl 69 (83)
T PF13214_consen 41 SYGWKKSNGIKYFCLLLSLLLGTASILGL 69 (83)
T ss_pred ccccccCCCeeeHHHHHHHHHhHHHHHHH
Confidence 48899999999999999999999999997
No 25
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related. These proteins are: Neurospora crassa sulphate permease II (gene cys-14). Yeast sulphate permeases (genes SUL1 and SUL2). Rat sulphate anion transporter 1 (SAT-1). Mammalian DTDST, a probable sulphate transporter which, in human, is involved in the genetic disease, diastrophic dysplasia (DTD). Sulphate transporters 1, 2 and 3 from the legume Stylosanthes hamata. Human pendrin (gene PDS), which is involved in a number of hearing loss genetic diseases. Human protein DRA (Down-Regulated in Adenoma). Soybean early nodulin 70. Escherichia coli hypothetical protein ychM. Caenorhabditis elegans hypothetical protein F41D9.5. These proteins are highly hydrophobic and seem to contain about 12 transmembrane domains.; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=20.33 E-value=96 Score=29.70 Aligned_cols=55 Identities=20% Similarity=0.269 Sum_probs=43.3
Q ss_pred hhHHHHHHHhhhhhHHHhhcccccccCCccchhHHHHhhhhhHHHHHhhcCccee
Q 042620 9 MAPTTYIFFASALPVIAFGEQHAKDTDGSLSTVETLSSTALCGIVHSVLGGQPLL 63 (392)
Q Consensus 9 laa~~flyFa~l~PaIaFG~ll~~~T~~~igv~E~lls~ai~Giifslf~GQPL~ 63 (392)
+...+=+-+.+..=.+.-....+++++..+..++-+++++++.++=++|+|-|-+
T Consensus 150 ~~~a~~ia~v~~~~s~~~~~~~~~~~~~~~d~n~El~a~G~aNi~s~~~gg~p~~ 204 (280)
T PF00916_consen 150 LPTALAIAIVGFIESLLIAKSIAKKTGYRIDPNQELIALGLANIVSGLFGGMPGS 204 (280)
T ss_pred chhHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHhhhccccchhhcccccc
Confidence 4444445555555566666677888888999999999999999999999999865
Done!