Your job contains 1 sequence.
>042627
MAAAEECNTGLCLGLGVGEHAAGRHERPKDNNNKRSAARAFLDLSFTLCPKDEDTGRMDH
NLSIGSGSKMSQDDGKAGVGNSNSKRINISGRKKLRLTIEQSRLLEDSFKLHTTLNSKQA
LAEQLNLEPRQVEVWFQNRRARTKLKQNEVDCEFLKKCCESLTDENKRLKKELQELQSAK
AGASSPLFIQLQKAATCPSCEKIMRTSDEGKNAAVNTDVVLKNNKWQRRFNATNEPN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 042627
(237 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2059143 - symbol:HAT9 species:3702 "Arabidopsi... 387 3.6e-40 2
TAIR|locus:2137599 - symbol:HAT22 species:3702 "Arabidops... 421 1.8e-39 1
TAIR|locus:2170194 - symbol:HAT14 "homeobox from Arabidop... 399 3.9e-37 1
TAIR|locus:2103396 - symbol:HAT3 "homeobox-leucine zipper... 384 1.5e-35 1
TAIR|locus:2129136 - symbol:HB-2 "homeobox protein 2" spe... 364 2.0e-33 1
TAIR|locus:2055028 - symbol:HB4 "homeobox-leucine zipper ... 355 1.8e-32 1
TAIR|locus:2129061 - symbol:HAT1 species:3702 "Arabidopsi... 342 4.2e-31 1
TAIR|locus:2171489 - symbol:HAT2 species:3702 "Arabidopsi... 342 4.2e-31 1
TAIR|locus:2049614 - symbol:HB17 "homeobox-leucine zipper... 318 1.5e-28 1
TAIR|locus:2013980 - symbol:HB18 "homeobox-leucine zipper... 291 1.1e-25 1
TAIR|locus:2202795 - symbol:AtHB23 "homeobox protein 23" ... 209 5.3e-17 1
TAIR|locus:2205075 - symbol:ATHB13 species:3702 "Arabidop... 184 3.1e-14 1
TAIR|locus:2102107 - symbol:HB20 "homeobox protein 20" sp... 180 7.8e-14 1
TAIR|locus:2150901 - symbol:HB-3 "homeobox 3" species:370... 179 1.7e-13 1
TAIR|locus:2140055 - symbol:HB16 "homeobox protein 16" sp... 172 2.4e-12 1
TAIR|locus:2084228 - symbol:HB-1 "homeobox 1" species:370... 170 5.3e-12 1
TAIR|locus:2168225 - symbol:HB5 "homeobox protein 5" spec... 170 1.0e-11 1
TAIR|locus:2041283 - symbol:HB6 "homeobox protein 6" spec... 168 2.6e-11 1
TAIR|locus:2040520 - symbol:HB22 "homeobox protein 22" sp... 152 5.8e-11 1
TAIR|locus:2062754 - symbol:HB-7 "homeobox 7" species:370... 161 1.4e-10 1
TAIR|locus:2046263 - symbol:HB21 "homeobox protein 21" sp... 153 4.7e-10 1
TAIR|locus:2154724 - symbol:HB52 "homeobox protein 52" sp... 141 1.1e-09 1
TAIR|locus:2079542 - symbol:HB-12 "homeobox 12" species:3... 152 1.5e-09 1
TAIR|locus:2173669 - symbol:HB53 "homeobox 53" species:37... 151 1.6e-09 1
TAIR|locus:2115215 - symbol:HB40 "homeobox protein 40" sp... 149 1.8e-09 1
TAIR|locus:2144578 - symbol:HB51 "homeobox 51" species:37... 147 7.6e-09 1
TAIR|locus:2135368 - symbol:PDF2 "AT4G04890" species:3702... 139 1.1e-06 1
UNIPROTKB|Q28ZA9 - symbol:unpg "Homeobox protein unplugge... 134 2.4e-06 1
UNIPROTKB|F1P4U7 - symbol:HOXD11 "Homeobox protein Hox-D1... 110 4.2e-06 1
TAIR|locus:2129396 - symbol:HDG4 "AT4G17710" species:3702... 132 7.0e-06 1
FB|FBgn0004110 - symbol:tin "tinman" species:7227 "Drosop... 129 7.1e-06 1
FB|FBgn0011758 - symbol:B-H1 "BarH1" species:7227 "Drosop... 130 8.2e-06 1
TAIR|locus:2175856 - symbol:REV "AT5G60690" species:3702 ... 132 8.8e-06 1
TAIR|locus:2206880 - symbol:HDG11 "AT1G73360" species:370... 131 9.3e-06 1
UNIPROTKB|F6USR4 - symbol:MEOX2 "Uncharacterized protein"... 111 9.9e-06 1
TAIR|locus:2062540 - symbol:HDG3 "AT2G32370" species:3702... 129 1.6e-05 1
UNIPROTKB|A5D7C5 - symbol:MEOX2 "Uncharacterized protein"... 123 1.9e-05 1
MGI|MGI:103219 - symbol:Meox2 "mesenchyme homeobox 2" spe... 123 1.9e-05 1
RGD|3079 - symbol:Meox2 "mesenchyme homeobox 2" species:1... 123 1.9e-05 1
UNIPROTKB|P39020 - symbol:Meox2 "Homeobox protein MOX-2" ... 123 1.9e-05 1
FB|FBgn0015561 - symbol:unpg "unplugged" species:7227 "Dr... 126 2.0e-05 1
UNIPROTKB|Q6F2E2 - symbol:vex1 "Homeobox protein vex1" sp... 122 2.2e-05 1
TAIR|locus:2119048 - symbol:ATML1 "AT4G21750" species:370... 128 2.5e-05 2
ZFIN|ZDB-GENE-030328-42 - symbol:pnx "posterior neuron-sp... 115 3.0e-05 1
RGD|1563858 - symbol:Hesx1 "HESX homeobox 1" species:1011... 114 4.5e-05 1
UNIPROTKB|I3L383 - symbol:HOXB8 "Homeobox protein Hox-B8"... 100 5.7e-05 1
UNIPROTKB|E2RDU9 - symbol:MEOX2 "Uncharacterized protein"... 119 5.7e-05 1
UNIPROTKB|F1SEJ3 - symbol:MEOX2 "Uncharacterized protein"... 119 5.7e-05 1
UNIPROTKB|P50222 - symbol:MEOX2 "Homeobox protein MOX-2" ... 119 5.8e-05 1
ZFIN|ZDB-GENE-980526-532 - symbol:hoxc3a "homeo box C3a" ... 117 6.6e-05 1
UNIPROTKB|F1NF72 - symbol:F1NF72 "Uncharacterized protein... 99 7.3e-05 1
UNIPROTKB|H9L2H7 - symbol:Gga.20677 "Uncharacterized prot... 99 7.3e-05 1
UNIPROTKB|H9L2H8 - symbol:Gga.20677 "Uncharacterized prot... 99 7.3e-05 1
WB|WBGene00000432 - symbol:ceh-7 species:6239 "Caenorhabd... 99 7.3e-05 1
WB|WBGene00022837 - symbol:ceh-45 species:6239 "Caenorhab... 115 8.5e-05 1
UNIPROTKB|P15142 - symbol:CHOX-7 "Homeobox protein CHOX-7... 98 9.5e-05 1
UNIPROTKB|P24341 - symbol:HOXD10 "Homeobox protein Hox-D1... 98 9.5e-05 1
UNIPROTKB|J9P7F8 - symbol:NOTO "Uncharacterized protein" ... 98 9.5e-05 1
WB|WBGene00000430 - symbol:ceh-5 species:6239 "Caenorhabd... 98 9.5e-05 1
TAIR|locus:2134088 - symbol:HB-8 "AT4G32880" species:3702... 123 9.5e-05 1
UNIPROTKB|F1MPM0 - symbol:HESX1 "Homeobox 1" species:9913... 111 0.00011 1
UNIPROTKB|Q9UBX0 - symbol:HESX1 "Homeobox expressed in ES... 111 0.00011 1
TAIR|locus:2127008 - symbol:ANL2 "ANTHOCYANINLESS 2" spec... 122 0.00012 1
UNIPROTKB|F1NHF8 - symbol:CDX4 "Uncharacterized protein" ... 97 0.00012 1
RGD|1586211 - symbol:Hoxb8 "homeo box B8" species:10116 "... 97 0.00012 1
ZFIN|ZDB-GENE-050417-97 - symbol:dmbx1b "diencephalon/mes... 117 0.00014 1
UNIPROTKB|I3LKM5 - symbol:HESX1 "Uncharacterized protein"... 110 0.00015 1
UNIPROTKB|Q2PYN8 - symbol:lbx1 "Transcription factor LBX1... 114 0.00017 1
UNIPROTKB|F1N8D2 - symbol:HESX1 "Uncharacterized protein"... 110 0.00018 1
UNIPROTKB|P79775 - symbol:P79775 "Homeobox protein ANF-1"... 110 0.00020 1
UNIPROTKB|E2R1U3 - symbol:HESX1 "Uncharacterized protein"... 109 0.00021 1
MGI|MGI:96071 - symbol:Hesx1 "homeobox gene expressed in ... 109 0.00021 1
UNIPROTKB|F1N8D1 - symbol:HESX1 "Uncharacterized protein"... 110 0.00021 1
ZFIN|ZDB-GENE-020509-2 - symbol:gbx2 "gastrulation brain ... 115 0.00022 1
UNIPROTKB|F1NHM4 - symbol:CDX4 "Uncharacterized protein" ... 94 0.00026 1
UNIPROTKB|D6RBG8 - symbol:PITX2 "Pituitary homeobox 2" sp... 94 0.00026 1
RGD|1595784 - symbol:Hoxc9 "homeobox C9" species:10116 "R... 94 0.00026 1
UNIPROTKB|P18866 - symbol:Hoxc8 "Homeobox protein Hox-C8"... 94 0.00026 1
WB|WBGene00004011 - symbol:pha-2 species:6239 "Caenorhabd... 106 0.00026 1
UNIPROTKB|P78367 - symbol:NKX3-2 "Homeobox protein Nkx-3.... 114 0.00027 1
UNIPROTKB|Q0P4H6 - symbol:lbx1 "Transcription factor LBX1... 112 0.00029 1
RGD|3116 - symbol:Msx2 "msh homeobox 2" species:10116 "Ra... 99 0.00029 1
UNIPROTKB|P52953 - symbol:Msx2 "Homeobox protein MSX-2" s... 99 0.00029 1
ZFIN|ZDB-GENE-000822-3 - symbol:hoxc11b "homeo box C11b" ... 113 0.00030 1
FB|FBgn0034520 - symbol:lms "lateral muscles scarcer" spe... 115 0.00030 1
FB|FBgn0038833 - symbol:CG15696 species:7227 "Drosophila ... 107 0.00030 1
UNIPROTKB|F1NE15 - symbol:LOC100858551 "Uncharacterized p... 93 0.00034 1
UNIPROTKB|D6RAR5 - symbol:D6RAR5 "Uncharacterized protein... 93 0.00034 1
RGD|1564874 - symbol:Nkx1-1 "NK1 transcription factor rel... 93 0.00034 1
UNIPROTKB|P31277 - symbol:HOXD11 "Homeobox protein Hox-D1... 113 0.00036 1
TAIR|locus:2167230 - symbol:HDG9 "AT5G17320" species:3702... 117 0.00039 1
ZFIN|ZDB-GENE-041210-244 - symbol:pax4 "paired box 4" spe... 113 0.00040 1
ZFIN|ZDB-GENE-990415-130 - symbol:hesx1 "homeo box (expre... 104 0.00040 1
UNIPROTKB|F6Q274 - symbol:F6Q274 "Uncharacterized protein... 111 0.00042 1
UNIPROTKB|P52954 - symbol:LBX1 "Transcription factor LBX1... 111 0.00043 1
UNIPROTKB|F1MCF6 - symbol:CDX1 "Uncharacterized protein" ... 92 0.00044 1
UNIPROTKB|F1SHT6 - symbol:F1SHT6 "Uncharacterized protein... 92 0.00044 1
UNIPROTKB|G3ECA1 - symbol:HoxA10 "Homebox A10" species:98... 92 0.00044 1
RGD|621233 - symbol:Cdx1 "caudal type homeo box 1" specie... 92 0.00044 1
UNIPROTKB|Q05095 - symbol:Cdx1 "Homeobox protein CDX-1" s... 92 0.00044 1
WARNING: Descriptions of 24 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2059143 [details] [associations]
symbol:HAT9 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:AC004786 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
ProtClustDB:CLSN2683864 EMBL:U09341 EMBL:U09342 EMBL:AJ441253
EMBL:AK229218 IPI:IPI00526618 PIR:A84617 PIR:T52371 PIR:T52372
RefSeq:NP_179865.1 UniGene:At.12844 UniGene:At.67823
ProteinModelPortal:P46603 SMR:P46603 EnsemblPlants:AT2G22800.1
GeneID:816811 KEGG:ath:AT2G22800 GeneFarm:3963 TAIR:At2g22800
eggNOG:NOG323848 InParanoid:P46603 OMA:MHMPAST PhylomeDB:P46603
Genevestigator:P46603 GermOnline:AT2G22800 Uniprot:P46603
Length = 274
Score = 387 (141.3 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 79/119 (66%), Positives = 93/119 (78%)
Query: 89 ISGRKKLRLTIEQSRLLEDSFKLHTTLN--SKQALAEQLNLEPRQVEVWFQNRRARTKLK 146
IS RKKLRLT +QS LLE+SFK H+TLN KQ LA QLNL PRQVEVWFQNRRARTKLK
Sbjct: 109 ISARKKLRLTKQQSALLEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQNRRARTKLK 168
Query: 147 QNEVDCEFLKKCCESLTDENKRLKKELQELQSAKAGASSPLFIQLQKAAT--CPSCEKI 203
Q EVDCEFLKKCCE+L DEN RL+KE+QEL++ K + P ++ + + CPSCE+I
Sbjct: 169 QTEVDCEFLKKCCETLADENIRLQKEIQELKTLKL--TQPFYMHMPASTLTKCPSCERI 225
Score = 57 (25.1 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 25/88 (28%), Positives = 38/88 (43%)
Query: 1 MAAAEECNTGLCLGLGVGEHAAGRHERPKDNNNK-RSAARAFLDLSFTLCPKDEDTGRMD 59
M + CNTGL LGLG P + N+ R ++ L+ S TLC +G
Sbjct: 1 MGFDDTCNTGLVLGLGPSPI-------PNNYNSTIRQSSVYKLEPSLTLCL----SGDPS 49
Query: 60 HNLSIGSGSKMSQDDGKAGVGNSNSKRI 87
+ G+ Q +GV + +S R+
Sbjct: 50 VTVVTGADQLCRQTSSHSGVSSFSSGRV 77
>TAIR|locus:2137599 [details] [associations]
symbol:HAT22 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009735 "response to cytokinin stimulus"
evidence=IEP] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009735 EMBL:AL035709
EMBL:AL161592 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:U09336 EMBL:U09337 EMBL:AJ441254 EMBL:BT002318 EMBL:AY087563
EMBL:M90417 IPI:IPI00522748 PIR:T06026 RefSeq:NP_195493.1
UniGene:At.23912 ProteinModelPortal:P46604 SMR:P46604 IntAct:P46604
EnsemblPlants:AT4G37790.1 GeneID:829935 KEGG:ath:AT4G37790
GeneFarm:3981 TAIR:At4g37790 eggNOG:NOG259949 InParanoid:P46604
OMA:TTERVVC PhylomeDB:P46604 ProtClustDB:CLSN2683864
Genevestigator:P46604 GermOnline:AT4G37790 Uniprot:P46604
Length = 278
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 91/174 (52%), Positives = 120/174 (68%)
Query: 55 TGRM--DHNLSIGSGSKMSQDDGK----AGVGNSNSKRINISGRKKLRLTIEQSRLLEDS 108
+GR+ + +S G G + +++ + + V + + +S RKKLRLT +QS LLED+
Sbjct: 82 SGRVKREREISGGDGEEEAEETTERVVCSRVSDDHDDEEGVSARKKLRLTKQQSALLEDN 141
Query: 109 FKLHTTLN--SKQALAEQLNLEPRQVEVWFQNRRARTKLKQNEVDCEFLKKCCESLTDEN 166
FKLH+TLN KQALA QLNL PRQVEVWFQNRRARTKLKQ EVDCEFLKKCCE+LTDEN
Sbjct: 142 FKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDEN 201
Query: 167 KRLKKELQELQSAKAGASSPLFIQLQKAAT--CPSCEKIMRTSDEGKNAAVNTD 218
+RL+KELQ+L++ K S P ++ + A CPSCE++ G AV+ +
Sbjct: 202 RRLQKELQDLKALKL--SQPFYMHMPAATLTMCPSCERLGGGGVGGDTTAVDEE 253
>TAIR|locus:2170194 [details] [associations]
symbol:HAT14 "homeobox from Arabidopsis thaliana"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:AP002032 EMBL:AJ431182 EMBL:BT005879 EMBL:AK227423 EMBL:U09334
IPI:IPI00522942 IPI:IPI00547278 PIR:T52367 RefSeq:NP_196289.2
RefSeq:NP_974743.1 UniGene:At.357 ProteinModelPortal:P46665
SMR:P46665 IntAct:P46665 PaxDb:P46665 PRIDE:P46665
EnsemblPlants:AT5G06710.1 GeneID:830560 KEGG:ath:AT5G06710
GeneFarm:3984 TAIR:At5g06710 eggNOG:NOG310615 InParanoid:P46665
OMA:KTSTPFY PhylomeDB:P46665 ProtClustDB:CLSN2917817
Genevestigator:P46665 Uniprot:P46665
Length = 336
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 91/186 (48%), Positives = 123/186 (66%)
Query: 45 SFTLCPKDEDTG--RMDHNL-SIG---SGSKMSQDD----GKAGVGNSNSKRINISGRKK 94
S ++ P D T ++D + S G +K DD + N ++ N S RKK
Sbjct: 132 SMSVSPPDSVTSSFQLDFGIKSYGYERRSNKRDIDDEVERSASRASNEDNDDENGSTRKK 191
Query: 95 LRLTIEQSRLLEDSFKLHTTLNSKQ--ALAEQLNLEPRQVEVWFQNRRARTKLKQNEVDC 152
LRL+ +QS LEDSFK H+TLN KQ ALA+QLNL PRQVEVWFQNRRARTKLKQ EVDC
Sbjct: 192 LRLSKDQSAFLEDSFKEHSTLNPKQKIALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDC 251
Query: 153 EFLKKCCESLTDENKRLKKELQELQSAKAGASSPLFIQLQKAAT--CPSCEKIMRTSDEG 210
E+LK+CCESLT+EN+RL+KE++EL++ K S+P ++QL CPSCE++ ++ +
Sbjct: 252 EYLKRCCESLTEENRRLQKEVKELRTLKT--STPFYMQLPATTLTMCPSCERVATSAAQP 309
Query: 211 KNAAVN 216
+A +
Sbjct: 310 STSAAH 315
>TAIR|locus:2103396 [details] [associations]
symbol:HAT3 "homeobox-leucine zipper protein 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AL138646 KO:K09338 HOGENOM:HOG000241612
ProtClustDB:CLSN2683322 EMBL:U09338 EMBL:U09339 EMBL:AJ440781
EMBL:AY099565 EMBL:BT008713 IPI:IPI00525230 PIR:T47850 PIR:T52350
RefSeq:NP_191598.1 UniGene:At.21112 ProteinModelPortal:P46602
SMR:P46602 IntAct:P46602 EnsemblPlants:AT3G60390.1 GeneID:825210
KEGG:ath:AT3G60390 GeneFarm:3969 TAIR:At3g60390 eggNOG:NOG246006
InParanoid:P46602 OMA:IQNTWIN PhylomeDB:P46602
Genevestigator:P46602 GermOnline:AT3G60390 Uniprot:P46602
Length = 315
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 86/164 (52%), Positives = 112/164 (68%)
Query: 56 GRMDHN-LSIGSGSKMSQDDGKAGVGNSNSKRINISGRKKLRLTIEQSRLLEDSFKLHTT 114
GR++ N + S S D + G GN + S RKKLRL+ EQ+ +LE++FK H+T
Sbjct: 129 GRVEDNEIERASCSLGGGSDDEDGSGNGDD-----SSRKKLRLSKEQALVLEETFKEHST 183
Query: 115 LNSKQ--ALAEQLNLEPRQVEVWFQNRRARTKLKQNEVDCEFLKKCCESLTDENKRLKKE 172
LN KQ ALA+QLNL RQVEVWFQNRRARTKLKQ EVDCE+LK+CCE+LTDEN+RL+KE
Sbjct: 184 LNPKQKMALAKQLNLRTRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTDENRRLQKE 243
Query: 173 LQELQSAKAGASSPLFIQLQKAAT---CPSCEKIMRTSDEGKNA 213
+ EL++ K S L++ ++ T CPSCE++ TS A
Sbjct: 244 VSELRALKL--SPHLYMHMKPPTTLTMCPSCERVAVTSSSSSVA 285
>TAIR|locus:2129136 [details] [associations]
symbol:HB-2 "homeobox protein 2" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0009733
"response to auxin stimulus" evidence=IMP] [GO:0009826
"unidimensional cell growth" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0048364 "root development" evidence=IMP] [GO:0009735 "response
to cytokinin stimulus" evidence=IEP] [GO:0009641 "shade avoidance"
evidence=IEP] [GO:0010017 "red or far-red light signaling pathway"
evidence=IEP] [GO:0010218 "response to far red light" evidence=IEP]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0010016 "shoot system morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0042803 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009735 GO:GO:0009733 GO:GO:0008283
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010218
GO:GO:0048364 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009826
EMBL:AL161544 GO:GO:0009585 GO:GO:0000976 GO:GO:0010017 KO:K09338
GO:GO:0009641 EMBL:Z97342 EMBL:M90394 EMBL:Z19602 EMBL:X68145
EMBL:X68146 EMBL:AF375453 EMBL:AY081747 EMBL:EF193551 EMBL:EF193552
EMBL:EF193553 EMBL:EF193554 EMBL:EF193555 EMBL:EF193556
EMBL:EF193557 EMBL:EF193558 EMBL:EF193559 EMBL:EF193560
EMBL:EF193561 EMBL:EF193562 EMBL:EF193563 EMBL:EF193564
EMBL:EF193565 EMBL:AY174653 EMBL:AY174654 EMBL:AY174655
EMBL:AY174656 IPI:IPI00517186 PIR:S31424 RefSeq:NP_193411.1
UniGene:At.24419 UniGene:At.74809 ProteinModelPortal:Q05466
SMR:Q05466 IntAct:Q05466 STRING:Q05466 EnsemblPlants:AT4G16780.1
GeneID:827384 KEGG:ath:AT4G16780 GeneFarm:3977 TAIR:At4g16780
eggNOG:NOG150160 InParanoid:Q05466 OMA:EDGDNSR PhylomeDB:Q05466
ProtClustDB:CLSN2685845 Genevestigator:Q05466 GermOnline:AT4G16780
GO:GO:0010016 Uniprot:Q05466
Length = 284
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 79/161 (49%), Positives = 105/161 (65%)
Query: 52 DEDTGRMDHNLSIGSG----SKMSQDDGKAGVGNSNSKRINISGRKKLRLTIEQSRLLED 107
DED G N ++ S S+ +D G + + RKKLRL+ +QS +LE+
Sbjct: 84 DEDAGVSSPNSTVSSSTGKRSEREEDTDPQGSRGISDDEDGDNSRKKLRLSKDQSAILEE 143
Query: 108 SFKLHTTLN--SKQALAEQLNLEPRQVEVWFQNRRARTKLKQNEVDCEFLKKCCESLTDE 165
+FK H+TLN KQALA+QL L RQVEVWFQNRRARTKLKQ EVDCEFL++CCE+LT+E
Sbjct: 144 TFKDHSTLNPKQKQALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEFLRRCCENLTEE 203
Query: 166 NKRLKKELQELQSAKAGASSPLFIQLQKAAT---CPSCEKI 203
N+RL+KE+ EL++ K S ++ + T CPSCE +
Sbjct: 204 NRRLQKEVTELRALKL--SPQFYMHMSPPTTLTMCPSCEHV 242
>TAIR|locus:2055028 [details] [associations]
symbol:HB4 "homeobox-leucine zipper protein 4"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS;IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0009725 "response to hormone stimulus"
evidence=IMP] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0010218
"response to far red light" evidence=IEP] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0009506 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010218
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009725 EMBL:AC002388
KO:K09338 HOGENOM:HOG000241612 EMBL:Y09582 EMBL:AJ441251
IPI:IPI00540244 PIR:T00402 RefSeq:NP_182018.1 UniGene:At.44957
ProteinModelPortal:P92953 SMR:P92953 PaxDb:P92953 PRIDE:P92953
EnsemblPlants:AT2G44910.1 GeneID:819100 KEGG:ath:AT2G44910
GeneFarm:3965 TAIR:At2g44910 eggNOG:NOG279137 InParanoid:P92953
OMA:RGGDENE PhylomeDB:P92953 ProtClustDB:CLSN2683322
ArrayExpress:P92953 Genevestigator:P92953 GermOnline:AT2G44910
GO:GO:0009641 Uniprot:P92953
Length = 318
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 80/147 (54%), Positives = 104/147 (70%)
Query: 63 SIGSGSKMSQD-DGKAGVGNSNSKRINISGRKKLRLTIEQSRLLEDSFKLHTTLNSKQ-- 119
S G GS S D DG G G+ RKKLRL+ +Q+ +LE++FK H+TLN KQ
Sbjct: 142 SRGGGSGGSDDEDGGNGDGS----------RKKLRLSKDQALVLEETFKEHSTLNPKQKL 191
Query: 120 ALAEQLNLEPRQVEVWFQNRRARTKLKQNEVDCEFLKKCCESLTDENKRLKKELQELQSA 179
ALA+QLNL RQVEVWFQNRRARTKLKQ EVDCE+LK+CC++LT+EN+RL+KE+ EL++
Sbjct: 192 ALAKQLNLRARQVEVWFQNRRARTKLKQTEVDCEYLKRCCDNLTEENRRLQKEVSELRAL 251
Query: 180 KAGASSPLFIQLQKAAT---CPSCEKI 203
K S L++ + T CPSCE++
Sbjct: 252 KL--SPHLYMHMTPPTTLTMCPSCERV 276
>TAIR|locus:2129061 [details] [associations]
symbol:HAT1 species:3702 "Arabidopsis thaliana"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003006
"developmental process involved in reproduction" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0010582 "floral
meristem determinacy" evidence=IGI] [GO:0043621 "protein
self-association" evidence=IPI] [GO:0048467 "gynoecium development"
evidence=IGI] [GO:0048507 "meristem development" evidence=IGI]
[GO:0080127 "fruit septum development" evidence=IGI]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010582
EMBL:Z97343 GO:GO:0000976 KO:K09338 HOGENOM:HOG000241612
eggNOG:KOG0483 EMBL:AL161546 EMBL:U09332 EMBL:U09333 EMBL:AJ441252
EMBL:BT005756 EMBL:BT006112 EMBL:AY087322 EMBL:AK228587
IPI:IPI00538010 PIR:B71444 RefSeq:NP_193476.1 UniGene:At.19738
ProteinModelPortal:P46600 SMR:P46600 EnsemblPlants:AT4G17460.1
GeneID:827457 KEGG:ath:AT4G17460 GeneFarm:3979 TAIR:At4g17460
InParanoid:P46600 OMA:LMCPSCE PhylomeDB:P46600
ProtClustDB:CLSN2685891 Genevestigator:P46600 GermOnline:AT4G17460
GO:GO:0080127 GO:GO:0048467 Uniprot:P46600
Length = 282
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 73/126 (57%), Positives = 90/126 (71%)
Query: 92 RKKLRLTIEQSRLLEDSFKLHTTLNSKQ--ALAEQLNLEPRQVEVWFQNRRARTKLKQNE 149
RKKLRL+ +QS +LED+FK H TLN KQ ALA++L L RQVEVWFQNRRARTKLKQ E
Sbjct: 134 RKKLRLSKDQSAVLEDTFKEHNTLNPKQKLALAKKLGLTARQVEVWFQNRRARTKLKQTE 193
Query: 150 VDCEFLKKCCESLTDENKRLKKELQELQSAKAGASSPLFIQLQKAAT---CPSCEKIMRT 206
VDCE+LK+C E LT+EN+RL+KE EL++ K S L+ Q+ T CPSCE++
Sbjct: 194 VDCEYLKRCVEKLTEENRRLEKEAAELRALKL--SPRLYGQMSPPTTLLMCPSCERVAGP 251
Query: 207 SDEGKN 212
S N
Sbjct: 252 SSSNHN 257
>TAIR|locus:2171489 [details] [associations]
symbol:HAT2 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP] [GO:0009734 "auxin mediated signaling pathway"
evidence=IEP] [GO:0009826 "unidimensional cell growth"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009641 "shade avoidance"
evidence=IEP] InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0009734
GO:GO:0003677 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009826 KO:K09338
HOGENOM:HOG000241612 GO:GO:0009641 EMBL:AB018117
ProtClustDB:CLSN2685891 EMBL:AB067629 EMBL:AJ431183 EMBL:AF428450
EMBL:AY052324 EMBL:AY061904 EMBL:U09335 IPI:IPI00526064 PIR:T52368
RefSeq:NP_199548.1 UniGene:At.25127 ProteinModelPortal:P46601
SMR:P46601 IntAct:P46601 STRING:P46601 EnsemblPlants:AT5G47370.1
GeneID:834784 KEGG:ath:AT5G47370 GeneFarm:3986 TAIR:At5g47370
eggNOG:NOG256142 InParanoid:P46601 OMA:IPINPWA PhylomeDB:P46601
Genevestigator:P46601 GermOnline:AT5G47370 Uniprot:P46601
Length = 283
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 78/149 (52%), Positives = 96/149 (64%)
Query: 64 IGSGSKMSQDDGKAGVGNSNSKRINISG---RKKLRLTIEQSRLLEDSFKLHTTLNSKQ- 119
+GSG + G S G RKKLRL+ +QS LE++FK H TLN KQ
Sbjct: 98 VGSGDDHDEITPDRGYSRGTSDEEEDGGETSRKKLRLSKDQSAFLEETFKEHNTLNPKQK 157
Query: 120 -ALAEQLNLEPRQVEVWFQNRRARTKLKQNEVDCEFLKKCCESLTDENKRLKKELQELQS 178
ALA++LNL RQVEVWFQNRRARTKLKQ EVDCE+LK+C E LT+EN+RL+KE EL++
Sbjct: 158 LALAKKLNLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLQKEAMELRT 217
Query: 179 AKAGASSPLFI-QLQKAAT---CPSCEKI 203
K SP F Q+ T CPSCE++
Sbjct: 218 LKL---SPQFYGQMTPPTTLIMCPSCERV 243
>TAIR|locus:2049614 [details] [associations]
symbol:HB17 "homeobox-leucine zipper protein 17"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 EMBL:AJ431181
EMBL:AC005560 IPI:IPI00540169 PIR:F84424 RefSeq:NP_178252.2
UniGene:At.42490 HSSP:P01366 ProteinModelPortal:Q8S9N6 SMR:Q8S9N6
PRIDE:Q8S9N6 EnsemblPlants:AT2G01430.1 GeneID:814671
KEGG:ath:AT2G01430 GeneFarm:3960 TAIR:At2g01430 eggNOG:NOG248755
HOGENOM:HOG000241612 InParanoid:Q8S9N6 OMA:PRCERIT PhylomeDB:Q8S9N6
ProtClustDB:CLSN2917976 Genevestigator:Q8S9N6 GermOnline:AT2G01430
Uniprot:Q8S9N6
Length = 275
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 75/162 (46%), Positives = 101/162 (62%)
Query: 46 FTLCP-KDEDTGRMDHNLSIGSGSKMSQDDGKAGVGNSNSKRINISGRKKLRLTIEQSRL 104
F+ P DE +G L + S +DG + + + RKKLRLT EQSRL
Sbjct: 93 FSSSPLSDEGSGGGRDQLRLDMNRLPSSEDGDDEEFSHDDG--SAPPRKKLRLTREQSRL 150
Query: 105 LEDSFKLHTTLNSKQ--ALAEQLNLEPRQVEVWFQNRRARTKLKQNEVDCEFLKKCCESL 162
LEDSF+ + TLN KQ LA+ L L PRQ+EVWFQNRRAR+KLKQ E++CE+LK+ SL
Sbjct: 151 LEDSFRQNHTLNPKQKEVLAKHLMLRPRQIEVWFQNRRARSKLKQTEMECEYLKRWFGSL 210
Query: 163 TDENKRLKKELQELQSAKAGASSPLFIQLQKAAT-CPSCEKI 203
T+EN RL +E++EL++ K G P + + T CP CE++
Sbjct: 211 TEENHRLHREVEELRAMKVG---PTTVNSASSLTMCPRCERV 249
>TAIR|locus:2013980 [details] [associations]
symbol:HB18 "homeobox-leucine zipper protein 18"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:AC008148 EMBL:AK118149 EMBL:BT005594 EMBL:AK175837
EMBL:AK175965 IPI:IPI00520212 RefSeq:NP_177248.3 UniGene:At.35255
HSSP:Q6B2C0 ProteinModelPortal:Q8GXM7 SMR:Q8GXM7
EnsemblPlants:AT1G70920.1 GeneID:843431 KEGG:ath:AT1G70920
GeneFarm:3959 TAIR:At1g70920 eggNOG:NOG312506 InParanoid:Q8GXM7
OMA:HTEMECE PhylomeDB:Q8GXM7 ProtClustDB:CLSN2918454
Genevestigator:Q8GXM7 GermOnline:AT1G70920 Uniprot:Q8GXM7
Length = 206
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 77/183 (42%), Positives = 104/183 (56%)
Query: 43 DLSFTLCPKDEDTGRMDHNLSIGSGSKMSQDDGKAGVGNSNSKRINISGRKKLRLTIEQS 102
D PK E+ D IG+ +++DD NS +R RKKLRLT EQS
Sbjct: 33 DFDINQTPKTEE----DREWMIGATPHVNEDDS-----NSGGRR-----RKKLRLTKEQS 78
Query: 103 RLLEDSFKLHTTLNSKQA--LAEQLNLEPRQVEVWFQNRRARTKLKQNEVDCEFLKKCCE 160
LLE+SF + TL KQ LA L L RQVEVWFQNRRAR+KLK E++CE+LK+
Sbjct: 79 HLLEESFIQNHTLTPKQKKDLATFLKLSQRQVEVWFQNRRARSKLKHTEMECEYLKRWFG 138
Query: 161 SLTDENKRLKKELQELQSAKAGASSPLFIQLQKAATCPSCEKIMRTSDEGKNAAVNTDVV 220
SL ++N+RL+ E++EL++ K ++S L + CP CE++ D NA V V
Sbjct: 139 SLKEQNRRLQIEVEELRALKPSSTSALTM-------CPRCERVTDAVDNDSNA-VQEGAV 190
Query: 221 LKN 223
L +
Sbjct: 191 LSS 193
>TAIR|locus:2202795 [details] [associations]
symbol:AtHB23 "homeobox protein 23" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009739 "response
to gibberellin stimulus" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 GO:GO:0000976
KO:K09338 HOGENOM:HOG000006025 EMBL:AC005508 EMBL:BT009727
EMBL:AK228056 EMBL:AY084913 IPI:IPI00532646 PIR:F86396
RefSeq:NP_564268.1 UniGene:At.43561 ProteinModelPortal:Q8LFD3
SMR:Q8LFD3 STRING:Q8LFD3 PRIDE:Q8LFD3 EnsemblPlants:AT1G26960.1
GeneID:839587 KEGG:ath:AT1G26960 GeneFarm:3956 TAIR:At1g26960
eggNOG:NOG257807 InParanoid:Q8LFD3 OMA:LAFFPEN PhylomeDB:Q8LFD3
ProtClustDB:CLSN2917066 Genevestigator:Q8LFD3 GermOnline:AT1G26960
Uniprot:Q8LFD3
Length = 255
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 68/184 (36%), Positives = 96/184 (52%)
Query: 31 NNNKRSAARAFLDLSFTLC---PKDEDTGRM--DHNLSIGSGSKMSQDDGKAGVGNSNSK 85
NNN AF +F+L ++ED ++ D + +G S M+ G + + +
Sbjct: 4 NNN----GLAFFPENFSLQNHHQEEEDHPQLLQDFHGFLGKRSPMNNVQGFCNLDMNGDE 59
Query: 86 RINISG----RKKLRLTIEQSRLLEDSFKLHTTLNS--KQALAEQLNLEPRQVEVWFQNR 139
+ G KK RL +EQ + LE F+L L S K LA L L+PRQ+ +WFQNR
Sbjct: 60 EYSDDGSKMGEKKRRLNMEQLKALEKDFELGNKLESDRKLELARALGLQPRQIAIWFQNR 119
Query: 140 RARTKLKQNEVDCEFLKKCCESLTDENKRLKKELQELQSAKAGASS--PL-FIQLQKAAT 196
RAR+K KQ E D + LK+ ESL DEN+ L+ + Q+LQ+ S P+ I L K T
Sbjct: 120 RARSKTKQLEKDYDMLKRQFESLRDENEVLQTQNQKLQAQVMALKSREPIESINLNKE-T 178
Query: 197 CPSC 200
SC
Sbjct: 179 EGSC 182
>TAIR|locus:2205075 [details] [associations]
symbol:ATHB13 species:3702 "Arabidopsis thaliana"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;IDA] [GO:0009744 "response to sucrose
stimulus" evidence=IMP] [GO:0009965 "leaf morphogenesis"
evidence=IMP] [GO:0048826 "cotyledon morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009744
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009965 GO:GO:0000976 KO:K09338 EMBL:AF208044
EMBL:AC013289 EMBL:AY057572 EMBL:AY133645 EMBL:AY086888
IPI:IPI00519626 PIR:H96719 RefSeq:NP_177136.1 UniGene:At.23736
UniGene:At.68137 ProteinModelPortal:Q8LC03 SMR:Q8LC03 STRING:Q8LC03
PaxDb:Q8LC03 PRIDE:Q8LC03 EnsemblPlants:AT1G69780.1 GeneID:843314
KEGG:ath:AT1G69780 GeneFarm:3958 TAIR:At1g69780 eggNOG:NOG250192
HOGENOM:HOG000006025 InParanoid:Q8LC03 OMA:NPILPSC PhylomeDB:Q8LC03
ProtClustDB:CLSN2682576 Genevestigator:Q8LC03 GO:GO:0048826
Uniprot:Q8LC03
Length = 294
Score = 184 (69.8 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 43/94 (45%), Positives = 57/94 (60%)
Query: 91 GRKKLRLTIEQSRLLEDSFKLHTTLNS--KQALAEQLNLEPRQVEVWFQNRRARTKLKQN 148
G KK RL +EQ + LE +F+L L K LA L L+PRQ+ +WFQNRRAR K KQ
Sbjct: 83 GEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQL 142
Query: 149 EVDCEFLKKCCESLTDENKRLKKELQELQSAKAG 182
E D + LK+ ++L EN L+ Q+LQ+ G
Sbjct: 143 EKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMG 176
>TAIR|locus:2102107 [details] [associations]
symbol:HB20 "homeobox protein 20" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0000041 "transition metal ion
transport" evidence=RCA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 KO:K09338
HOGENOM:HOG000006025 EMBL:AC008261 EMBL:AK228890 EMBL:BT029221
EMBL:AY087631 IPI:IPI00546192 RefSeq:NP_186771.1 UniGene:At.41313
HSSP:P14859 ProteinModelPortal:Q8LAT0 SMR:Q8LAT0 IntAct:Q8LAT0
PaxDb:Q8LAT0 PRIDE:Q8LAT0 EnsemblPlants:AT3G01220.1 GeneID:821232
KEGG:ath:AT3G01220 GeneFarm:3967 TAIR:At3g01220 eggNOG:NOG328135
InParanoid:Q8LAT0 OMA:SDINLEM PhylomeDB:Q8LAT0
ProtClustDB:CLSN2684985 Genevestigator:Q8LAT0 Uniprot:Q8LAT0
Length = 286
Score = 180 (68.4 bits), Expect = 7.8e-14, P = 7.8e-14
Identities = 44/96 (45%), Positives = 59/96 (61%)
Query: 91 GRKKLRLTIEQSRLLEDSFKLHTTLNSKQA--LAEQLNLEPRQVEVWFQNRRARTKLKQN 148
G KK RL +EQ + LE SF+L L ++ LA+ L ++PRQ+ +WFQNRRAR K +Q
Sbjct: 85 GEKKKRLQLEQVKALEKSFELGNKLEPERKIQLAKALGMQPRQIAIWFQNRRARWKTRQL 144
Query: 149 EVDCEFLKKCCESLTDENKRL----KKELQELQSAK 180
E D + LKK ESL +N L KK L E+ + K
Sbjct: 145 ERDYDSLKKQFESLKSDNASLLAYNKKLLAEVMALK 180
>TAIR|locus:2150901 [details] [associations]
symbol:HB-3 "homeobox 3" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
ProtClustDB:CLSN2684985 EMBL:AL353993 EMBL:X62644 EMBL:AK229364
EMBL:U09340 IPI:IPI00541406 IPI:IPI00570430 PIR:S20930 PIR:T49950
PIR:T52370 RefSeq:NP_568309.2 UniGene:At.49022
ProteinModelPortal:Q00466 SMR:Q00466 EnsemblPlants:AT5G15150.1
GeneID:831367 KEGG:ath:AT5G15150 GeneFarm:3985 TAIR:At5g15150
eggNOG:NOG322183 InParanoid:Q00466 OMA:EERNNIN PhylomeDB:Q00466
Genevestigator:Q00466 GermOnline:AT5G15150 Uniprot:Q00466
Length = 314
Score = 179 (68.1 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 51/131 (38%), Positives = 72/131 (54%)
Query: 55 TGRMDHN-LSIGSGSKMSQDDGKAGVGNSNSKRINIS----GRKKLRLTIEQSRLLEDSF 109
TG DH+ L+ S + + + + VG ++ + S G KK RL +EQ R LE SF
Sbjct: 72 TGVSDHHHLTQKSPTTTNNMNDQDQVGEEDNLSDDGSHMMLGEKKKRLNLEQVRALEKSF 131
Query: 110 KLHTTLNS--KQALAEQLNLEPRQVEVWFQNRRARTKLKQNEVDCEFLKKCCESLTDENK 167
+L L K LA+ L L+PRQ+ +WFQNRRAR K KQ E D + LKK + L +N
Sbjct: 132 ELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLERDYDSLKKQFDVLKSDND 191
Query: 168 RLKKELQELQS 178
L ++L +
Sbjct: 192 SLLAHNKKLHA 202
>TAIR|locus:2140055 [details] [associations]
symbol:HB16 "homeobox protein 16" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;NAS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009637
"response to blue light" evidence=IMP] [GO:0030308 "negative
regulation of cell growth" evidence=IMP] [GO:0048510 "regulation of
timing of transition from vegetative to reproductive phase"
evidence=IMP] [GO:0048573 "photoperiodism, flowering"
evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0045893 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0030308
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0009637
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048510 GO:GO:0048573
EMBL:AL161596 GO:GO:0000976 EMBL:AL035708 KO:K09338
HOGENOM:HOG000006025 EMBL:AF076641 EMBL:AF370620 EMBL:AY054571
EMBL:AY128917 IPI:IPI00531709 PIR:G85474 PIR:T06112
RefSeq:NP_195716.1 UniGene:At.20863 ProteinModelPortal:Q940J1
SMR:Q940J1 PaxDb:Q940J1 PRIDE:Q940J1 EnsemblPlants:AT4G40060.1
GeneID:830169 KEGG:ath:AT4G40060 GeneFarm:3982 TAIR:At4g40060
eggNOG:NOG321520 InParanoid:Q940J1 OMA:CDSSAVL PhylomeDB:Q940J1
ProtClustDB:CLSN2685900 Genevestigator:Q940J1 Uniprot:Q940J1
Length = 294
Score = 172 (65.6 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 45/107 (42%), Positives = 61/107 (57%)
Query: 81 NSNSKRINISGRKKLRLTIEQSRLLEDSFKLHTTLNS--KQALAEQLNLEPRQVEVWFQN 138
+ N + +S KK RL ++Q + LE +F+L L K LA++L L+PRQV VWFQN
Sbjct: 48 SGNHHHMGLS-EKKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQN 106
Query: 139 RRARTKLKQNEVDCEFLKKCCESLTDENKRLKKE----LQELQSAKA 181
RRAR K KQ E D LK +SL L+++ LQE+ KA
Sbjct: 107 RRARWKTKQLEKDYGVLKGQYDSLRHNFDSLRRDNDSLLQEISKIKA 153
>TAIR|locus:2084228 [details] [associations]
symbol:HB-1 "homeobox 1" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009637
"response to blue light" evidence=IEP] [GO:0009651 "response to
salt stress" evidence=IEP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0010167 "response
to nitrate" evidence=RCA] [GO:0015706 "nitrate transport"
evidence=RCA] [GO:0015996 "chlorophyll catabolic process"
evidence=RCA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0009965 "leaf morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0042803 GO:GO:0009651 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0009637 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009965 EMBL:AC009325 GO:GO:0000976 KO:K09338
HOGENOM:HOG000006025 EMBL:X58821 EMBL:AY058188 EMBL:AY098972
EMBL:M90416 IPI:IPI00536407 PIR:S16325 RefSeq:NP_186796.1
UniGene:At.41275 UniGene:At.47815 ProteinModelPortal:Q02283
SMR:Q02283 STRING:Q02283 EnsemblPlants:AT3G01470.1 GeneID:821138
KEGG:ath:AT3G01470 GeneFarm:3968 TAIR:At3g01470 eggNOG:NOG245596
InParanoid:Q02283 OMA:QVHLLEK PhylomeDB:Q02283
ProtClustDB:CLSN2684999 Genevestigator:Q02283 GermOnline:AT3G01470
Uniprot:Q02283
Length = 272
Score = 170 (64.9 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 46/107 (42%), Positives = 60/107 (56%)
Query: 93 KKLRLTIEQSRLLEDSFKLHTTLNS--KQALAEQLNLEPRQVEVWFQNRRARTKLKQNEV 150
KK RLT EQ LLE SF+ L K LA++L L+PRQV VWFQNRRAR K KQ E
Sbjct: 68 KKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLER 127
Query: 151 DCEFLKKCCESLTD-------ENKRLKKEL----QELQSAKAGASSP 186
D + LK + L +N +L+ E+ ++LQ + A+ P
Sbjct: 128 DYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTEKLQGKQETANEP 174
>TAIR|locus:2168225 [details] [associations]
symbol:HB5 "homeobox protein 5" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009787
"regulation of abscisic acid mediated signaling pathway"
evidence=NAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP;IDA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=TAS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0042803
GO:GO:0009738 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AB011479 GO:GO:0000976
HOGENOM:HOG000006025 EMBL:X67033 EMBL:AF325054 EMBL:AY074293
EMBL:AY091340 IPI:IPI00526581 PIR:S47135 RefSeq:NP_201334.1
UniGene:At.19698 UniGene:At.67842 ProteinModelPortal:P46667
SMR:P46667 STRING:P46667 EnsemblPlants:AT5G65310.1 GeneID:836656
KEGG:ath:AT5G65310 GeneFarm:3988 TAIR:At5g65310 eggNOG:NOG325574
InParanoid:P46667 OMA:PTSELAF PhylomeDB:P46667
ProtClustDB:CLSN2686460 Genevestigator:P46667 Uniprot:P46667
Length = 312
Score = 170 (64.9 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 44/111 (39%), Positives = 63/111 (56%)
Query: 72 QDDGK----AGVGNSNSKRINISGRKKLRLTIEQSRLLEDSFKLHTTLNS--KQALAEQL 125
+DDG GVG+++S + KK RL +EQ + LE +F++ L K LA++L
Sbjct: 51 EDDGSLEDLGGVGHASST----AAEKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQEL 106
Query: 126 NLEPRQVEVWFQNRRARTKLKQNEVDCEFLKKCCESLTDENKRLKKELQEL 176
L+PRQV +WFQNRRAR K KQ E D LK ++L L+++ L
Sbjct: 107 GLQPRQVAIWFQNRRARWKTKQLERDYGVLKSNFDALKRNRDSLQRDNDSL 157
>TAIR|locus:2041283 [details] [associations]
symbol:HB6 "homeobox protein 6" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS;TAS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=TAS] [GO:0009788
"negative regulation of abscisic acid mediated signaling pathway"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0009269 "response to desiccation"
evidence=RCA] [GO:0009409 "response to cold" evidence=RCA]
[GO:0009651 "response to salt stress" evidence=RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009738 GO:GO:0009414 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009788
EMBL:AC006592 GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
ProtClustDB:CLSN2685900 EMBL:X67034 EMBL:AY060569 EMBL:AY063819
EMBL:AY094457 EMBL:AY122903 EMBL:AF104900 IPI:IPI00548532
PIR:E84612 PIR:S47136 RefSeq:NP_565536.1 UniGene:At.25257
ProteinModelPortal:P46668 SMR:P46668 STRING:P46668
EnsemblPlants:AT2G22430.1 GeneID:816775 KEGG:ath:AT2G22430
GeneFarm:3962 TAIR:At2g22430 eggNOG:NOG255500 InParanoid:P46668
OMA:ESDISVK PhylomeDB:P46668 Genevestigator:P46668
GermOnline:AT2G22430 Uniprot:P46668
Length = 311
Score = 168 (64.2 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 53/143 (37%), Positives = 74/143 (51%)
Query: 47 TLCPK---DEDTGRMDHNLSIGSGSKMSQDDGKAGVGNSNSKRINISGRKKLRLTIEQSR 103
+LCP DE + R S + +++ +A V + +S KK RL+I Q +
Sbjct: 16 SLCPTTSTDEQSPRRYGGREFQSMLEGYEEEEEAIVEERG--HVGLS-EKKRRLSINQVK 72
Query: 104 LLEDSFKLHTTLNS--KQALAEQLNLEPRQVEVWFQNRRARTKLKQNEVDCEFLKKCCES 161
LE +F+L L K LA++L L+PRQV VWFQNRRAR K KQ E D LK +S
Sbjct: 73 ALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKTQYDS 132
Query: 162 LTDENKRLKKE----LQELQSAK 180
L L+++ LQE+ K
Sbjct: 133 LRHNFDSLRRDNESLLQEISKLK 155
>TAIR|locus:2040520 [details] [associations]
symbol:HB22 "homeobox protein 22" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006919 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
EMBL:AC006282 EMBL:DQ056569 IPI:IPI00527137 PIR:E84782
RefSeq:NP_850266.1 UniGene:At.53052 ProteinModelPortal:Q4PSR7
SMR:Q4PSR7 EnsemblPlants:AT2G36610.1 GeneID:818233
KEGG:ath:AT2G36610 GeneFarm:3964 TAIR:At2g36610 eggNOG:NOG297545
InParanoid:Q4PSR7 OMA:MEYWSSS PhylomeDB:Q4PSR7
ProtClustDB:CLSN2918190 Genevestigator:Q4PSR7 GermOnline:AT2G36610
Uniprot:Q4PSR7
Length = 185
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 42/113 (37%), Positives = 65/113 (57%)
Query: 76 KAGVGNSNSKRINISGRKKLRLTIEQSRLLEDSFKLHTTLNS----------KQALAEQL 125
++G G S N +KK ++T EQ + LE SF+ LN K L+++L
Sbjct: 55 ESGYGEE-SNSFNGQEKKKKKMTSEQLKFLERSFQEEIKLNPDRKMKLNPDRKMKLSKEL 113
Query: 126 NLEPRQVEVWFQNRRARTKLKQNEVDCEFLKKCCESLTDENKRLKKELQELQS 178
L+PRQ+ VWFQNR+AR K KQ E E L++ + ++ E + L++EL +L+S
Sbjct: 114 GLQPRQIAVWFQNRKARWKNKQLEHLYESLRQEFDIVSREKELLQEELIQLKS 166
>TAIR|locus:2062754 [details] [associations]
symbol:HB-7 "homeobox 7" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009409 "response to cold" evidence=RCA] [GO:0009414 "response
to water deprivation" evidence=IEP;RCA] [GO:0009737 "response to
abscisic acid stimulus" evidence=IEP;RCA] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009738
GO:GO:0009414 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG252905 HOGENOM:HOG000006310
ProtClustDB:CLSN2683559 EMBL:X67032 EMBL:AC005819 EMBL:AY045826
EMBL:AY091364 IPI:IPI00544746 PIR:H84905 PIR:S47137
RefSeq:NP_182191.1 UniGene:At.136 ProteinModelPortal:P46897
SMR:P46897 STRING:P46897 EnsemblPlants:AT2G46680.1 GeneID:819280
KEGG:ath:AT2G46680 GeneFarm:3966 TAIR:At2g46680 InParanoid:P46897
OMA:THHESEN PhylomeDB:P46897 Genevestigator:P46897 Uniprot:P46897
Length = 258
Score = 161 (61.7 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 39/96 (40%), Positives = 56/96 (58%)
Query: 85 KRINISGRKKLRLTIEQSRLLEDSFKLHTTLN--SKQALAEQLNLEPRQVEVWFQNRRAR 142
K+ N + + R + EQ + LE F+ T L K LA +L L+PRQV +WFQN+RAR
Sbjct: 24 KKSNHNKNNQRRFSDEQIKSLEMMFESETRLEPRKKVQLARELGLQPRQVAIWFQNKRAR 83
Query: 143 TKLKQNEVDCEFLKKCCESLTDENKRLKKELQELQS 178
K KQ E + L++ ++L + + LKKE Q L S
Sbjct: 84 WKSKQLETEYNILRQNYDNLASQFESLKKEKQALVS 119
>TAIR|locus:2046263 [details] [associations]
symbol:HB21 "homeobox protein 21" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006950 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 KO:K09338 HSSP:P01366 EMBL:AC006135
EMBL:BT031362 IPI:IPI00520845 PIR:F84565 RefSeq:NP_179445.1
UniGene:At.52810 ProteinModelPortal:Q9ZU70 SMR:Q9ZU70
EnsemblPlants:AT2G18550.1 GeneID:816370 KEGG:ath:AT2G18550
GeneFarm:3961 TAIR:At2g18550 eggNOG:NOG270330 HOGENOM:HOG000034122
InParanoid:Q9ZU70 OMA:RVEDEYT PhylomeDB:Q9ZU70
ProtClustDB:CLSN2683051 ArrayExpress:Q9ZU70 Genevestigator:Q9ZU70
GermOnline:AT2G18550 Uniprot:Q9ZU70
Length = 220
Score = 153 (58.9 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 40/87 (45%), Positives = 52/87 (59%)
Query: 93 KKLRLTIEQSRLLEDSFKLHTTLNS--KQALAEQLNLEPRQVEVWFQNRRARTKLKQNEV 150
+K +L+ EQ R+LE SF+ L S K LA +L L+PRQV VWFQNRRAR K K+ E
Sbjct: 61 RKRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKRVED 120
Query: 151 DCEFLKKCCESLTDENKRLKKELQELQ 177
+ LK E+ E RL E+ L+
Sbjct: 121 EYTKLKNAYETTVVEKCRLDSEVIHLK 147
>TAIR|locus:2154724 [details] [associations]
symbol:HB52 "homeobox protein 52" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009637 "response
to blue light" evidence=IEP] [GO:0009646 "response to absence of
light" evidence=IEP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0009637
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009646 EMBL:AB007644
EMBL:BT015927 EMBL:BT021920 EMBL:AK229211 IPI:IPI00520413
RefSeq:NP_200209.1 UniGene:At.29523 ProteinModelPortal:Q9FN29
SMR:Q9FN29 EnsemblPlants:AT5G53980.1 GeneID:835481
KEGG:ath:AT5G53980 GeneFarm:3987 TAIR:At5g53980 eggNOG:NOG240187
HOGENOM:HOG000029156 InParanoid:Q9FN29 OMA:DELYACF PhylomeDB:Q9FN29
ProtClustDB:CLSN2916425 Genevestigator:Q9FN29 GermOnline:AT5G53980
Uniprot:Q9FN29
Length = 156
Score = 141 (54.7 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 45/110 (40%), Positives = 59/110 (53%)
Query: 81 NSNSKRINISGRKKLRLTIEQSRLLEDSFKLHTTLNS--KQALAEQLNLEPRQVEVWFQN 138
NS S+ N KK RLT +Q R LE F ++ L K L+ QL L RQV VWFQN
Sbjct: 3 NSQSQGKN----KKKRLTQDQVRQLEKCFTMNKKLEPDLKLQLSNQLGLPQRQVAVWFQN 58
Query: 139 RRARTKLKQNEVD-CEFLKKCCESLTDENKRLKKELQELQSAKAGASSPL 187
+RAR K + EV C K +L+D+ K L+ ++Q LQ A + L
Sbjct: 59 KRARFKTQSLEVQHCTLQSKHEAALSDKAK-LEHQVQFLQDELKRARNQL 107
>TAIR|locus:2079542 [details] [associations]
symbol:HB-12 "homeobox 12" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009737 "response to abscisic
acid stimulus" evidence=IEP;RCA;IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0009615 "response to virus" evidence=IEP] [GO:0006970 "response
to osmotic stress" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0009737 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0045893 GO:GO:0009651 GO:GO:0009414 GO:GO:0003700
GO:GO:0006351 GO:GO:0009615 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AF001949 EMBL:AL138642 EMBL:AY059828
EMBL:BT002206 EMBL:AY087187 IPI:IPI00522302 PIR:T47981 PIR:T51751
RefSeq:NP_191748.1 UniGene:At.25517 HSSP:P02836
ProteinModelPortal:Q9M276 SMR:Q9M276 STRING:Q9M276
EnsemblPlants:AT3G61890.1 GeneID:825362 KEGG:ath:AT3G61890
GeneFarm:3970 TAIR:At3g61890 eggNOG:NOG252905 HOGENOM:HOG000006310
InParanoid:Q9M276 KO:K09338 OMA:HELMNIV PhylomeDB:Q9M276
ProtClustDB:CLSN2683559 Genevestigator:Q9M276 GermOnline:AT3G61890
Uniprot:Q9M276
Length = 235
Score = 152 (58.6 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 39/98 (39%), Positives = 56/98 (57%)
Query: 83 NSKRINISGRKKLRLTIEQSRLLEDSFKLHTTLN--SKQALAEQLNLEPRQVEVWFQNRR 140
N K++ S +K R + EQ + LE F+ T L K +A +L L+PRQV +WFQN+R
Sbjct: 21 NKKKMKKSNNQK-RFSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQVAIWFQNKR 79
Query: 141 ARTKLKQNEVDCEFLKKCCESLTDENKRLKKELQELQS 178
AR K KQ E + L+ +L + + +KKE Q L S
Sbjct: 80 ARWKTKQLEKEYNTLRANYNNLASQFEIMKKEKQSLVS 117
>TAIR|locus:2173669 [details] [associations]
symbol:HB53 "homeobox 53" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0048364 "root development"
evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009733 GO:GO:0006950
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG250192
HSSP:P01366 HOGENOM:HOG000034122 ProtClustDB:CLSN2683051
EMBL:AY683477 EMBL:AB018119 EMBL:BT024847 IPI:IPI00532925
RefSeq:NP_201471.1 UniGene:At.51263 ProteinModelPortal:Q9LVR0
SMR:Q9LVR0 PRIDE:Q9LVR0 EnsemblPlants:AT5G66700.1 GeneID:836803
KEGG:ath:AT5G66700 GeneFarm:3989 TAIR:At5g66700 InParanoid:Q9LVR0
OMA:ELAPETN PhylomeDB:Q9LVR0 Genevestigator:Q9LVR0
GermOnline:AT5G66700 Uniprot:Q9LVR0
Length = 228
Score = 151 (58.2 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 47/151 (31%), Positives = 76/151 (50%)
Query: 78 GVGNSNSKRI-NISGR-KKLRLTIEQSRLLEDSFKLHTTLNS--KQALAEQLNLEPRQVE 133
G +N + + I G +K +LT EQ +LE SF L S K+ +A +L L+PRQV
Sbjct: 54 GSSATNEEDVAEIGGMLRKRKLTDEQVNMLEYSFGNEHKLESGRKEKIAGELGLDPRQVA 113
Query: 134 VWFQNRRARTKLKQNEVDCEFLKKCCESLTDENKRLKKELQELQSAKAGASSPLFIQLQK 193
VWFQNRRAR K K+ E + LK +++ +L+ ++ +L + A S + ++
Sbjct: 114 VWFQNRRARWKNKKLEEEYAKLKNHHDNVVLGQCQLESQILKLTEQLSEAQSEIRKLSER 173
Query: 194 AATCPSCEKIMRTSDEGKNAAVNTDVVLKNN 224
P+ S E NA + ++ + N
Sbjct: 174 LEEMPTNSSSSSLSVEANNAPTDFELAPETN 204
>TAIR|locus:2115215 [details] [associations]
symbol:HB40 "homeobox protein 40" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0006950 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL161589 GO:GO:0000976
KO:K09338 HSSP:P10037 HOGENOM:HOG000034122 EMBL:Z99708
EMBL:BX827896 IPI:IPI00520900 PIR:H85433 RefSeq:NP_195392.2
UniGene:At.50404 ProteinModelPortal:O23208 SMR:O23208 PRIDE:O23208
EnsemblPlants:AT4G36740.1 GeneID:829827 KEGG:ath:AT4G36740
GeneFarm:3980 TAIR:At4g36740 eggNOG:NOG244411 InParanoid:O23208
OMA:NSYIDEA PhylomeDB:O23208 Genevestigator:O23208 Uniprot:O23208
Length = 216
Score = 149 (57.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 38/87 (43%), Positives = 53/87 (60%)
Query: 93 KKLRLTIEQSRLLEDSFKLHTTLNS--KQALAEQLNLEPRQVEVWFQNRRARTKLKQNEV 150
+K +LT EQ +LE SF L S K LA +L L+PRQV VWFQNRRAR K K+ E
Sbjct: 55 RKRKLTDEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEE 114
Query: 151 DCEFLKKCCESLTDENKRLKKELQELQ 177
+ LK +++ + RL+ E+ +L+
Sbjct: 115 EYNKLKNSHDNVVVDKCRLESEVIQLK 141
>TAIR|locus:2144578 [details] [associations]
symbol:HB51 "homeobox 51" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009965 "leaf
morphogenesis" evidence=IMP] [GO:0010434 "bract formation"
evidence=IGI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IGI] [GO:0048510 "regulation of timing of
transition from vegetative to reproductive phase" evidence=IGI]
[GO:0010582 "floral meristem determinacy" evidence=IGI] [GO:0048443
"stamen development" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AB005235 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009965
GO:GO:0048510 GO:GO:0010582 GO:GO:0000976 HOGENOM:HOG000006025
EMBL:AL162506 IPI:IPI00533817 IPI:IPI01019585 PIR:T48406
RefSeq:NP_195999.2 UniGene:At.54712 ProteinModelPortal:Q9LZR0
SMR:Q9LZR0 GeneID:831723 KEGG:ath:AT5G03790 GeneFarm:3983
TAIR:At5g03790 eggNOG:KOG0483 InParanoid:Q9LZR0 OMA:AHPRTEN
ArrayExpress:Q9LZR0 Genevestigator:Q9LZR0 GermOnline:AT5G03790
GO:GO:0010434 Uniprot:Q9LZR0
Length = 235
Score = 147 (56.8 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 40/100 (40%), Positives = 61/100 (61%)
Query: 81 NSNSKRINISGRKKLRLTIEQSRLLEDSFKLHTTLNS--KQALAEQLNLEPRQVEVWFQN 138
N+N++ I KK RLT Q LE SF+ L+S K L+ +L L+PRQ+ VWFQN
Sbjct: 70 NNNNEMI-----KKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQN 124
Query: 139 RRARTKLKQNEVDCEFLKKCCESLTDENKRLKKELQELQS 178
RRAR K KQ E + L++ + ++ E + L E+++L++
Sbjct: 125 RRARWKAKQLEQLYDSLRQEYDVVSREKQMLHDEVKKLRA 164
>TAIR|locus:2135368 [details] [associations]
symbol:PDF2 "AT4G04890" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009913 "epidermal cell differentiation"
evidence=IMP] [GO:0048825 "cotyledon development" evidence=IGI]
[GO:0006473 "protein acetylation" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 EMBL:AL161502 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338 HSSP:Q6B2C0
eggNOG:NOG261733 ProtClustDB:CLSN2681990 GO:GO:0048825
GO:GO:0009913 EMBL:AF128393 EMBL:AB056455 EMBL:AF424560
EMBL:AY062575 EMBL:BT000144 IPI:IPI00536198 PIR:E85061
RefSeq:NP_567274.1 UniGene:At.4047 ProteinModelPortal:Q93V99
SMR:Q93V99 IntAct:Q93V99 PaxDb:Q93V99 PRIDE:Q93V99
EnsemblPlants:AT4G04890.1 GeneID:825828 KEGG:ath:AT4G04890
TAIR:At4g04890 InParanoid:Q93V99 OMA:MIPARHM PhylomeDB:Q93V99
Genevestigator:Q93V99 Uniprot:Q93V99
Length = 743
Score = 139 (54.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 44/150 (29%), Positives = 68/150 (45%)
Query: 46 FTLCPK---DED---TGRMDHNLSIGSGSKMSQDDGKAGVGNSNSKRINISGRKKLRLTI 99
F + PK D D TG + + SG++++ ++ S+R N R R T
Sbjct: 13 FDMTPKSTSDNDLGITGSREDDFETKSGTEVTTENPSGEELQDPSQRPNKKKRYH-RHTQ 71
Query: 100 EQSRLLEDSFKL--HTTLNSKQALAEQLNLEPRQVEVWFQNRRARTKLKQNEVDCEFLKK 157
Q + LE FK H ++ L+ LNLEP QV+ WFQN+R + K + + + LK
Sbjct: 72 RQIQELESFFKECPHPDDKQRKELSRDLNLEPLQVKFWFQNKRTQMKAQSERHENQILKS 131
Query: 158 CCESLTDENKRLKKELQELQSAKAGASSPL 187
+ L EN R K+ L G + +
Sbjct: 132 DNDKLRAENNRYKEALSNATCPNCGGPAAI 161
>UNIPROTKB|Q28ZA9 [details] [associations]
symbol:unpg "Homeobox protein unplugged" species:46245
"Drosophila pseudoobscura pseudoobscura" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0007420 "brain development" evidence=ISS] [GO:0051960
"regulation of nervous system development" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0007420 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:CM000071 GenomeReviews:CM000071_GR
eggNOG:NOG315879 KO:K09321 OMA:FAQNHER OrthoDB:EOG4H70T3
GO:GO:0051960 RefSeq:XP_001361128.1 ProteinModelPortal:Q28ZA9
SMR:Q28ZA9 GeneID:4804593 KEGG:dpo:Dpse_GA14073 FlyBase:FBgn0074104
InParanoid:Q28ZA9 Uniprot:Q28ZA9
Length = 491
Score = 134 (52.2 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 42/121 (34%), Positives = 62/121 (51%)
Query: 28 PKDNNNKRSAAR--AFLDLSFTLCPKDEDTGRMDHNLSIGSGSKMSQDDGKAGVGNSNSK 85
P++ N + +R A+ + C DE G H+ + G G K SQ +G G+S+SK
Sbjct: 268 PRNCNRELDKSRNGAYTNSDSEDCSDDE--GAHSHHDASGLGGKDSQGNGS---GSSSSK 322
Query: 86 RINISGRKKLRLTIEQSRLLEDSF--KLHTTLNSKQALAEQLNLEPRQVEVWFQNRRART 143
S R++ T EQ LE F K + +L + +A L L QV++WFQNRRA+
Sbjct: 323 ----SRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKW 378
Query: 144 K 144
K
Sbjct: 379 K 379
>UNIPROTKB|F1P4U7 [details] [associations]
symbol:HOXD11 "Homeobox protein Hox-D11" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001759 "organ induction" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0010720 "positive regulation of cell development"
evidence=IEA] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0048589 "developmental growth"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0032332 GO:GO:0048589 GO:GO:0001759
GO:GO:0010720 GeneTree:ENSGT00700000104263 IPI:IPI00583692
EMBL:AADN02020032 Ensembl:ENSGALT00000015085 Uniprot:F1P4U7
Length = 109
Score = 110 (43.8 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 30/84 (35%), Positives = 43/84 (51%)
Query: 64 IGSGSKMSQDDGKAGVGNSNSKRINISGRKK-LRLTIEQSRLLEDSFKLHTTLNSKQAL- 121
+ + S + G+A SNS + RKK T Q R LE F + +N ++ L
Sbjct: 10 VTTASGAASPPGEAVAEKSNSSAVPQRSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQ 69
Query: 122 -AEQLNLEPRQVEVWFQNRRARTK 144
+ LNL RQV++WFQNRR + K
Sbjct: 70 LSRMLNLTDRQVKIWFQNRRMKEK 93
>TAIR|locus:2129396 [details] [associations]
symbol:HDG4 "AT4G17710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006944 "cellular membrane fusion" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AL161547 Gene3D:1.10.10.60 SUPFAM:SSF46689 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338
HSSP:Q6B2C0 EMBL:Z97344 eggNOG:NOG264325 EMBL:AY133700
IPI:IPI00546205 PIR:B71447 RefSeq:NP_193506.2 UniGene:At.32974
ProteinModelPortal:Q8L7H4 SMR:Q8L7H4 IntAct:Q8L7H4 PaxDb:Q8L7H4
PRIDE:Q8L7H4 EnsemblPlants:AT4G17710.1 GeneID:827492
KEGG:ath:AT4G17710 TAIR:At4g17710 InParanoid:Q8L7H4
PhylomeDB:Q8L7H4 Genevestigator:Q8L7H4 Uniprot:Q8L7H4
Length = 709
Score = 132 (51.5 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 45/166 (27%), Positives = 82/166 (49%)
Query: 64 IGSGSKMSQDDGKAGVGNSNSKRINISGRKKL--RLTIEQSRLLEDSFK--LHTTLNSKQ 119
I SGS S G V N+ ++ + +KK R T Q + +E FK H ++
Sbjct: 60 IESGSGKSTGSGHDPVENTAIEQEPPAAKKKRYHRHTASQIQQMEALFKENAHPDTKTRL 119
Query: 120 ALAEQLNLEPRQVEVWFQNRRARTKLKQNEVDCEFLKKCCESLTDENKRLKKELQELQSA 179
L+++L L P QV+ WFQN+R + K +Q+ D LK E+L E++ ++ Q L +
Sbjct: 120 RLSKKLGLSPIQVKFWFQNKRTQIKAQQSRSDNAKLKAENETLKTESQNIQSNFQCLFCS 179
Query: 180 KAGASSPLFIQLQKAATCPSCEKIMRTSDEGKNAAVNTDVVLKNNK 225
G + ++L+ A +++ R+ +N + + ++ + NK
Sbjct: 180 TCGHN----LRLENARLRQELDRL-RSIVSMRNPSPSQEITPETNK 220
>FB|FBgn0004110 [details] [associations]
symbol:tin "tinman" species:7227 "Drosophila melanogaster"
[GO:0008354 "germ cell migration" evidence=IMP;TAS] [GO:0007506
"gonadal mesoderm development" evidence=IMP] [GO:0008406 "gonad
development" evidence=TAS] [GO:0007280 "pole cell migration"
evidence=TAS] [GO:0000980 "RNA polymerase II distal enhancer
sequence-specific DNA binding" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEP;IDA;IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS;IDA;NAS] [GO:0007525 "somatic muscle development"
evidence=NAS] [GO:0007522 "visceral muscle development"
evidence=NAS] [GO:0007498 "mesoderm development"
evidence=IEP;NAS;TAS] [GO:0007510 "cardioblast cell fate
determination" evidence=TAS] [GO:0007507 "heart development"
evidence=TAS] [GO:0007501 "mesodermal cell fate specification"
evidence=TAS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0001708 "cell fate specification"
evidence=NAS] [GO:0007552 "metamorphosis" evidence=TAS] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0035051 "cardiocyte differentiation" evidence=IMP;TAS]
[GO:0010002 "cardioblast differentiation" evidence=IMP] [GO:0061320
"pericardial nephrocyte differentiation" evidence=IMP] [GO:0048542
"lymph gland development" evidence=IMP] [GO:0035050 "embryonic
heart tube development" evidence=IMP] [GO:0007435 "salivary gland
morphogenesis" evidence=IMP] [GO:0055007 "cardiac muscle cell
differentiation" evidence=IMP] [GO:0071907 "determination of
digestive tract left/right asymmetry" evidence=IMP] [GO:0048615
"embryonic anterior midgut (ectodermal) morphogenesis"
evidence=IMP] [GO:0061101 "neuroendocrine cell differentiation"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 EMBL:AE014297 GO:GO:0005634 GO:GO:0045892
GO:GO:0007280 GO:GO:0007435 GO:GO:0007510 GO:GO:0045944
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003705 GO:GO:0007506
GO:GO:0007501 GO:GO:0000980 GO:GO:0055007 GO:GO:0007552
GO:GO:0048542 GO:GO:0061101 GO:GO:0035050 GO:GO:0061320
eggNOG:NOG310976 GeneTree:ENSGT00700000104098 EMBL:X55192
EMBL:BT015242 EMBL:AY368079 EMBL:AY368080 EMBL:AY368081
EMBL:AY368082 EMBL:AY368083 EMBL:AY368084 EMBL:AY368085
EMBL:AY368086 EMBL:AY368087 EMBL:AY368088 EMBL:AY368089
EMBL:AY368090 EMBL:AY368091 EMBL:AY368092 EMBL:AY368093
EMBL:AY368094 EMBL:AY368095 EMBL:AY368096 EMBL:AY368097
EMBL:AY368098 EMBL:AY368099 EMBL:AY368100 EMBL:AY368101
EMBL:AY368102 EMBL:AY368103 EMBL:AY368104 EMBL:AY368105
EMBL:AY368106 EMBL:AY368107 EMBL:M27292 PIR:A43561
RefSeq:NP_524433.1 UniGene:Dm.21675 ProteinModelPortal:P22711
SMR:P22711 IntAct:P22711 STRING:P22711 EnsemblMetazoa:FBtr0084086
GeneID:42536 KEGG:dme:Dmel_CG7895 UCSC:CG7895-RA CTD:42536
FlyBase:FBgn0004110 InParanoid:P22711 KO:K09352 OMA:SEYIPTP
OrthoDB:EOG4BK3KV PhylomeDB:P22711 GenomeRNAi:42536 NextBio:829303
Bgee:P22711 GermOnline:CG7895 Uniprot:P22711
Length = 416
Score = 129 (50.5 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 35/112 (31%), Positives = 63/112 (56%)
Query: 52 DEDTGRMDHNLSIGSGSKMSQDD--GKAGVGNSNSKRINISGRKKLRLTIEQSRLLEDS- 108
DE + D++ S S++ ++ G + G SNS ++K R+ Q+++LE
Sbjct: 260 DEGAKKKDNSQVTSSRSELRKNSISGNSNPG-SNSGSTKPRMKRKPRVLFSQAQVLELEC 318
Query: 109 -FKLHTTLNS--KQALAEQLNLEPRQVEVWFQNRRARTKLKQNEVDCEFLKK 157
F+L L ++ +A++LNL QV++WFQNRR ++K + ++DCE + K
Sbjct: 319 RFRLKKYLTGAEREIIAQKLNLSATQVKIWFQNRRYKSK--RGDIDCEGIAK 368
>FB|FBgn0011758 [details] [associations]
symbol:B-H1 "BarH1" species:7227 "Drosophila melanogaster"
[GO:0008052 "sensory organ boundary specification" evidence=IMP]
[GO:0008057 "eye pigment granule organization" evidence=IMP]
[GO:0001751 "compound eye photoreceptor cell differentiation"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0008407 "chaeta morphogenesis" evidence=IMP]
[GO:0007455 "eye-antennal disc morphogenesis" evidence=IMP]
[GO:0007479 "leg disc proximal/distal pattern formation"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0003677 "DNA binding"
evidence=NAS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IGI;IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003677 EMBL:AE014298
GO:GO:0007601 GO:GO:0043565 GO:GO:0050896 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0003705
GO:GO:0000122 GO:GO:0001751 GO:GO:0008057 GO:GO:0007479
GO:GO:0008407 GO:GO:0007455 GeneTree:ENSGT00700000104206
EMBL:M73079 EMBL:M73259 EMBL:M73078 EMBL:AY058309 PIR:B39369
RefSeq:NP_523387.1 UniGene:Dm.2610 ProteinModelPortal:Q24255
SMR:Q24255 DIP:DIP-19778N MINT:MINT-881308 STRING:Q24255
EnsemblMetazoa:FBtr0074430 GeneID:32724 KEGG:dme:Dmel_CG5529
CTD:32724 FlyBase:FBgn0011758 eggNOG:NOG263484 InParanoid:Q24255
KO:K09360 OMA:RFMINDI PhylomeDB:Q24255 GenomeRNAi:32724
NextBio:780048 Bgee:Q24255 GermOnline:CG5529 GO:GO:0008052
Uniprot:Q24255
Length = 544
Score = 130 (50.8 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 38/110 (34%), Positives = 58/110 (52%)
Query: 51 KDEDTGRMDHNLSIGSGSKMSQDDGKAGVGNSNSKRINISGR-KKLR--LTIEQSRLLED 107
+D D+G MD + +G K DDG + S S +S + +K R T Q + LE
Sbjct: 259 EDCDSGNMDDHSVCSNGGK--DDDGNSVKSGSTSDMSGLSKKQRKARTAFTDHQLQTLEK 316
Query: 108 SFKL--HTTLNSKQALAEQLNLEPRQVEVWFQNRRARTKLKQNEVDCEFL 155
SF+ + ++ +Q LA +L+L QV+ W+QNRR + K +Q V E L
Sbjct: 317 SFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWK-RQTAVGLELL 365
>TAIR|locus:2175856 [details] [associations]
symbol:REV "AT5G60690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0008289 "lipid binding" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IMP] [GO:0010014
"meristem initiation" evidence=RCA;IMP] [GO:0009956 "radial pattern
formation" evidence=IMP] [GO:0010051 "xylem and phloem pattern
formation" evidence=RCA;IMP] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA;IMP] [GO:0009944 "polarity
specification of adaxial/abaxial axis" evidence=RCA;IMP]
[GO:0007155 "cell adhesion" evidence=RCA] [GO:0009887 "organ
morphogenesis" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010072 "primary shoot apical meristem
specification" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=RCA] [GO:0010075 "regulation of meristem growth"
evidence=RCA] [GO:0010090 "trichome morphogenesis" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0048439 "flower morphogenesis"
evidence=RCA] [GO:0048519 "negative regulation of biological
process" evidence=RCA] [GO:0048589 "developmental growth"
evidence=RCA] [GO:0048765 "root hair cell differentiation"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030154 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 EMBL:AB005246 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 GO:GO:0010051 GO:GO:0009855
GO:GO:0009944 KO:K09338 HSSP:P10037 ProtClustDB:CLSN2679470
InterPro:IPR013978 Pfam:PF08670 GO:GO:0009956 GO:GO:0010014
EMBL:AF188994 EMBL:AY170127 EMBL:AF233592 EMBL:AK229564
EMBL:EF598684 EMBL:EF598685 EMBL:EF598686 EMBL:EF598687
EMBL:EF598688 EMBL:EF598689 EMBL:EF598690 EMBL:EF598691
EMBL:EF598692 EMBL:EF598693 EMBL:EF598694 EMBL:EF598695
EMBL:EF598696 EMBL:EF598697 EMBL:EF598698 EMBL:EF598699
EMBL:EF598700 EMBL:EF598701 EMBL:EF598702 EMBL:EF598703
EMBL:EF598704 EMBL:EF598705 EMBL:EF598706 IPI:IPI00531930
RefSeq:NP_200877.1 UniGene:At.49201 UniGene:At.7238
ProteinModelPortal:Q9SE43 SMR:Q9SE43 STRING:Q9SE43 PaxDb:Q9SE43
PRIDE:Q9SE43 EnsemblPlants:AT5G60690.1 GeneID:836190
KEGG:ath:AT5G60690 TAIR:At5g60690 eggNOG:NOG323815
InParanoid:Q9M5B6 OMA:TIELVYM PhylomeDB:Q9SE43
Genevestigator:Q9SE43 Uniprot:Q9SE43
Length = 842
Score = 132 (51.5 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 40/136 (29%), Positives = 68/136 (50%)
Query: 81 NSNSKRINISGRKKLRLTIEQSRLLEDSFK---LHTTLNSKQALAE---QLNLEPRQVEV 134
+S ++ ++ SG K +R T EQ LE + ++L +Q + E N+EP+Q++V
Sbjct: 14 DSMNRHLDSSG-KYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECSILANIEPKQIKV 72
Query: 135 WFQNRRARTKLKQNEVDCEFLKKCCES----LTDENKRLKKELQELQSAKAGASSPLFIQ 190
WFQNRR R K ++ + + + + L +EN RL+K++ +L Q
Sbjct: 73 WFQNRRCRDKQRKEASRLQSVNRKLSAMNKLLMEENDRLQKQVSQLVCENGYMKQ----Q 128
Query: 191 LQKAATCPSCEKIMRT 206
L PSCE ++ T
Sbjct: 129 LTTVVNDPSCESVVTT 144
>TAIR|locus:2206880 [details] [associations]
symbol:HDG11 "AT1G73360" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0010091 "trichome branching"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 GO:GO:0010091 HSSP:P02836 KO:K09338
EMBL:AC012396 EMBL:BT003979 EMBL:BT004915 IPI:IPI00520147
PIR:B96760 RefSeq:NP_177479.1 UniGene:At.34997
ProteinModelPortal:Q9FX31 SMR:Q9FX31 IntAct:Q9FX31 PaxDb:Q9FX31
PRIDE:Q9FX31 EnsemblPlants:AT1G73360.1 GeneID:843671
KEGG:ath:AT1G73360 TAIR:At1g73360 eggNOG:NOG70408 InParanoid:Q9FX31
OMA:MKLAQRM PhylomeDB:Q9FX31 ProtClustDB:CLSN2679864
Genevestigator:Q9FX31 Uniprot:Q9FX31
Length = 722
Score = 131 (51.2 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 35/112 (31%), Positives = 55/112 (49%)
Query: 65 GSGSKMSQDDGKAGVGNSNSKRINISGRKKLRLTIEQSRLLEDSFKL--HTTLNSKQALA 122
GSGS D G G + + + ++ R T +Q + LE SFK H + L+
Sbjct: 9 GSGSGSGGDGG--GSHHHDGSETDRKKKRYHRHTAQQIQRLESSFKECPHPDEKQRNQLS 66
Query: 123 EQLNLEPRQVEVWFQNRRARTKLKQNEVDCEFLKKCCESLTDENKRLKKELQ 174
+L L PRQ++ WFQNRR + K + D LK + + EN +++ L+
Sbjct: 67 RELGLAPRQIKFWFQNRRTQLKAQHERADNSALKAENDKIRCENIAIREALK 118
>UNIPROTKB|F6USR4 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001757 "somite
specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:AADN02000860 EMBL:AADN02000861
EMBL:AADN02000862 EMBL:AADN02000863 EMBL:AADN02000864
IPI:IPI00821029 ProteinModelPortal:F6USR4
Ensembl:ENSGALT00000037944 ArrayExpress:F6USR4 Uniprot:F6USR4
Length = 154
Score = 111 (44.1 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 33/82 (40%), Positives = 43/82 (52%)
Query: 66 SGSKMSQDDGKAGVGNSNSKRINISGRK-KLRLTIEQSRLLEDSFKLHTTLNS--KQALA 122
SG + S D + GN S+ +N RK + T EQ R LE F H L + +A
Sbjct: 14 SGKRKS-DSSDSQEGNYKSE-VNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIA 71
Query: 123 EQLNLEPRQVEVWFQNRRARTK 144
L+L RQV+VWFQNRR + K
Sbjct: 72 VNLDLTERQVKVWFQNRRMKWK 93
>TAIR|locus:2062540 [details] [associations]
symbol:HDG3 "AT2G32370" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048825 "cotyledon development" evidence=IGI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 KO:K09338 eggNOG:NOG261733 GO:GO:0048825
EMBL:AC005700 EMBL:EF988635 IPI:IPI00527257 PIR:C84732
RefSeq:NP_180796.2 UniGene:At.38083 ProteinModelPortal:Q9ZV65
SMR:Q9ZV65 PaxDb:Q9ZV65 PRIDE:Q9ZV65 EnsemblPlants:AT2G32370.1
GeneID:817798 KEGG:ath:AT2G32370 TAIR:At2g32370 InParanoid:A7LBA8
PhylomeDB:Q9ZV65 Genevestigator:Q9ZV65 Uniprot:Q9ZV65
Length = 725
Score = 129 (50.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 40/136 (29%), Positives = 68/136 (50%)
Query: 54 DTGRMDHNLSIGSGSKMSQDDGKAGVGNSNSKRINISGRKKLRLTIEQSRLLEDSFKLHT 113
D+G D + SG+ S + G+ G+GN+ + R +K R T Q +E F+
Sbjct: 39 DSGDQDFD----SGNTSSGNHGE-GLGNNQAPRHK--KKKYNRHTQLQISEMEAFFRECP 91
Query: 114 TLNSKQA--LAEQLNLEPRQVEVWFQNRRARTKLKQNEVDCEFLKKCCESLTDENKRLKK 171
+ KQ L+ QL L+P Q++ WFQN+R + K +Q + L+ L EN+RL++
Sbjct: 92 HPDDKQRYDLSAQLGLDPVQIKFWFQNKRTQNKNQQERFENSELRNLNNHLRSENQRLRE 151
Query: 172 ELQELQSAKAGASSPL 187
+ + K G + +
Sbjct: 152 AIHQALCPKCGGQTAI 167
>UNIPROTKB|A5D7C5 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0060021 "palate development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001757
"somite specification" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519 GO:GO:0001757
GeneTree:ENSGT00660000095141 HOGENOM:HOG000230987
HOVERGEN:HBG052456 KO:K09322 CTD:4223 OMA:DHTLFGC OrthoDB:EOG4PZJ7H
EMBL:DAAA02009993 EMBL:DAAA02009994 EMBL:DAAA02009995 EMBL:BC140506
IPI:IPI00711174 RefSeq:NP_001091514.1 UniGene:Bt.63482 SMR:A5D7C5
Ensembl:ENSBTAT00000004198 GeneID:518540 KEGG:bta:518540
InParanoid:A5D7C5 NextBio:20872676 Uniprot:A5D7C5
Length = 303
Score = 123 (48.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 34/82 (41%), Positives = 43/82 (52%)
Query: 66 SGSKMSQDDGKAGVGNSNSKRINISGRK-KLRLTIEQSRLLEDSFKLHTTLNS--KQALA 122
SGSK D + GN S+ +N RK + T EQ R LE F H L + +A
Sbjct: 162 SGSKRKSDSSDSQEGNYKSE-VNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIA 220
Query: 123 EQLNLEPRQVEVWFQNRRARTK 144
L+L RQV+VWFQNRR + K
Sbjct: 221 VNLDLTERQVKVWFQNRRMKWK 242
>MGI|MGI:103219 [details] [associations]
symbol:Meox2 "mesenchyme homeobox 2" species:10090 "Mus
musculus" [GO:0001525 "angiogenesis" evidence=IMP] [GO:0001757
"somite specification" evidence=IGI] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO]
[GO:0060021 "palate development" evidence=IMP] [GO:0060173 "limb
development" evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:103219 GO:GO:0005737 GO:GO:0016607
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519 GO:GO:0001757
GeneTree:ENSGT00660000095141 HOGENOM:HOG000230987
HOVERGEN:HBG052456 KO:K09322 CTD:4223 OMA:DHTLFGC OrthoDB:EOG4PZJ7H
EMBL:Z16406 EMBL:AK028352 EMBL:AK031152 EMBL:AK142690 EMBL:S79168
IPI:IPI00108444 PIR:B49122 RefSeq:NP_032610.1 UniGene:Mm.341398
ProteinModelPortal:P32443 SMR:P32443 STRING:P32443
PhosphoSite:P32443 PRIDE:P32443 Ensembl:ENSMUST00000041183
GeneID:17286 KEGG:mmu:17286 UCSC:uc007nkf.1 InParanoid:P32443
NextBio:291796 Bgee:P32443 CleanEx:MM_MEOX2 Genevestigator:P32443
GermOnline:ENSMUSG00000036144 Uniprot:P32443
Length = 303
Score = 123 (48.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 34/82 (41%), Positives = 43/82 (52%)
Query: 66 SGSKMSQDDGKAGVGNSNSKRINISGRK-KLRLTIEQSRLLEDSFKLHTTLNS--KQALA 122
SGSK D + GN S+ +N RK + T EQ R LE F H L + +A
Sbjct: 162 SGSKRKSDSSDSQEGNYKSE-VNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIA 220
Query: 123 EQLNLEPRQVEVWFQNRRARTK 144
L+L RQV+VWFQNRR + K
Sbjct: 221 VNLDLTERQVKVWFQNRRMKWK 242
>RGD|3079 [details] [associations]
symbol:Meox2 "mesenchyme homeobox 2" species:10116 "Rattus
norvegicus" [GO:0001525 "angiogenesis" evidence=IEA;ISO] [GO:0001757
"somite specification" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007519 "skeletal muscle tissue
development" evidence=IEA;ISO] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0060021 "palate development" evidence=IEA;ISO]
[GO:0060173 "limb development" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:3079 GO:GO:0005737 GO:GO:0016607
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519 GO:GO:0001757
HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322 CTD:4223
OrthoDB:EOG4PZJ7H EMBL:Z17223 IPI:IPI00210232 PIR:A48130
RefSeq:NP_058845.1 UniGene:Rn.34890 ProteinModelPortal:P39020
SMR:P39020 STRING:P39020 GeneID:29279 KEGG:rno:29279 UCSC:RGD:3079
InParanoid:P39020 NextBio:608651 Genevestigator:P39020
GermOnline:ENSRNOG00000006588 Uniprot:P39020
Length = 303
Score = 123 (48.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 34/82 (41%), Positives = 43/82 (52%)
Query: 66 SGSKMSQDDGKAGVGNSNSKRINISGRK-KLRLTIEQSRLLEDSFKLHTTLNS--KQALA 122
SGSK D + GN S+ +N RK + T EQ R LE F H L + +A
Sbjct: 162 SGSKRKSDSSDSQEGNYKSE-VNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIA 220
Query: 123 EQLNLEPRQVEVWFQNRRARTK 144
L+L RQV+VWFQNRR + K
Sbjct: 221 VNLDLTERQVKVWFQNRRMKWK 242
>UNIPROTKB|P39020 [details] [associations]
symbol:Meox2 "Homeobox protein MOX-2" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:3079 GO:GO:0005737 GO:GO:0016607
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519 GO:GO:0001757
HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322 CTD:4223
OrthoDB:EOG4PZJ7H EMBL:Z17223 IPI:IPI00210232 PIR:A48130
RefSeq:NP_058845.1 UniGene:Rn.34890 ProteinModelPortal:P39020
SMR:P39020 STRING:P39020 GeneID:29279 KEGG:rno:29279 UCSC:RGD:3079
InParanoid:P39020 NextBio:608651 Genevestigator:P39020
GermOnline:ENSRNOG00000006588 Uniprot:P39020
Length = 303
Score = 123 (48.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 34/82 (41%), Positives = 43/82 (52%)
Query: 66 SGSKMSQDDGKAGVGNSNSKRINISGRK-KLRLTIEQSRLLEDSFKLHTTLNS--KQALA 122
SGSK D + GN S+ +N RK + T EQ R LE F H L + +A
Sbjct: 162 SGSKRKSDSSDSQEGNYKSE-VNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIA 220
Query: 123 EQLNLEPRQVEVWFQNRRARTK 144
L+L RQV+VWFQNRR + K
Sbjct: 221 VNLDLTERQVKVWFQNRRMKWK 242
>FB|FBgn0015561 [details] [associations]
symbol:unpg "unplugged" species:7227 "Drosophila
melanogaster" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0051960 "regulation of nervous
system development" evidence=IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0007420 "brain development"
evidence=IMP] [GO:0007424 "open tracheal system development"
evidence=TAS] [GO:0007426 "tracheal outgrowth, open tracheal
system" evidence=TAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 EMBL:AE013599 GO:GO:0005634 GO:GO:0007420
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0007426
eggNOG:NOG315879 KO:K09321 GeneTree:ENSGT00660000095141 EMBL:U35427
EMBL:BT022753 RefSeq:NP_477146.1 UniGene:Dm.6807
ProteinModelPortal:Q4V5A3 SMR:Q4V5A3 STRING:Q4V5A3 PRIDE:Q4V5A3
EnsemblMetazoa:FBtr0088586 GeneID:35942 KEGG:dme:Dmel_CG1650
UCSC:CG1650-RA CTD:35942 FlyBase:FBgn0015561 InParanoid:Q4V5A3
OMA:FAQNHER OrthoDB:EOG4H70T3 PhylomeDB:Q4V5A3 GenomeRNAi:35942
NextBio:795976 Bgee:Q4V5A3 GO:GO:0051960 Uniprot:Q4V5A3
Length = 485
Score = 126 (49.4 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 41/121 (33%), Positives = 59/121 (48%)
Query: 28 PKDNNNKRSAAR--AFLDLSFTLCPKDEDTGRMDHNLSIGSGSKMSQDDGKAGVGNSNSK 85
P++ N + +R A+ + C DE G + G G K SQ +G + SNSK
Sbjct: 265 PRNYNGEMDKSRNGAYTNSDSEDCSDDE--GAQSRHEGGGMGGKDSQGNGSS----SNSK 318
Query: 86 RINISGRKKLRLTIEQSRLLEDSF--KLHTTLNSKQALAEQLNLEPRQVEVWFQNRRART 143
S R++ T EQ LE F K + +L + +A L L QV++WFQNRRA+
Sbjct: 319 ----SRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKW 374
Query: 144 K 144
K
Sbjct: 375 K 375
>UNIPROTKB|Q6F2E2 [details] [associations]
symbol:vex1 "Homeobox protein vex1" species:8364 "Xenopus
(Silurana) tropicalis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0030509 "BMP signaling pathway" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0048264 "determination of ventral identity" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030509
GO:GO:0048264 HSSP:P06602 EMBL:AC149072 HOVERGEN:HBG094147
UniGene:Str.30175 ProteinModelPortal:Q6F2E2 Xenbase:XB-GENE-483077
Uniprot:Q6F2E2
Length = 282
Score = 122 (48.0 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 36/117 (30%), Positives = 58/117 (49%)
Query: 44 LSFTLCPKDEDTGRMDHNLSIGSGSKMSQDDGKAGVGNSNSKRINI-----SGRKKLRLT 98
L F P++ T R SI ++ S D G+ ++N K I++ + R + + T
Sbjct: 81 LHFHPAPQELTTSR---RTSIEVSAESSTDQRVIGMTDTNKKTISVCDEDAASRARTKFT 137
Query: 99 IEQSRLLEDSFKLHTTLNS--KQALAEQLNLEPRQVEVWFQNRRARTKLKQNEVDCE 153
EQ LE SFK + + S K+ L++ L L Q++ WFQNRR + K + + E
Sbjct: 138 AEQLEELEKSFKENRYIGSSEKRRLSKVLKLSENQIKTWFQNRRMKFKRQTQDARVE 194
>TAIR|locus:2119048 [details] [associations]
symbol:ATML1 "AT4G21750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0009913 "epidermal cell differentiation"
evidence=IGI] [GO:0048825 "cotyledon development" evidence=IGI]
[GO:0006473 "protein acetylation" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010075
"regulation of meristem growth" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 EMBL:AL161555 HSSP:Q6B2C0 EMBL:U37589
EMBL:AL035527 EMBL:AY091104 EMBL:AY150491 EMBL:AK229970
IPI:IPI00535360 PIR:T05850 RefSeq:NP_001031692.1 RefSeq:NP_193906.2
UniGene:At.2706 ProteinModelPortal:Q8RWU4 SMR:Q8RWU4 STRING:Q8RWU4
PRIDE:Q8RWU4 EnsemblPlants:AT4G21750.1 EnsemblPlants:AT4G21750.2
GeneID:828263 KEGG:ath:AT4G21750 TAIR:At4g21750 eggNOG:NOG261733
InParanoid:Q8RWU4 OMA:HAWTTLS PhylomeDB:Q8RWU4
ProtClustDB:CLSN2681990 Genevestigator:Q8RWU4 GO:GO:0048825
GO:GO:0009913 Uniprot:Q8RWU4
Length = 762
Score = 128 (50.1 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 40/149 (26%), Positives = 68/149 (45%)
Query: 46 FTLCPKDED-----TGRMDHNLSIGSGSKMSQDDGKAGVGNSNSKRINISGRKKLRLTIE 100
F + PK+ + TG + + SG++++ ++ ++R N R R T
Sbjct: 14 FDMTPKNSENDLGITGSHEEDFETKSGAEVTMENPLEEELQDPNQRPNKKKRYH-RHTQR 72
Query: 101 QSRLLEDSFKL--HTTLNSKQALAEQLNLEPRQVEVWFQNRRARTKLKQNEVDCEFLKKC 158
Q + LE FK H ++ L+ +L+LEP QV+ WFQN+R + K + + + LK
Sbjct: 73 QIQELESFFKECPHPDDKQRKELSRELSLEPLQVKFWFQNKRTQMKAQHERHENQILKSE 132
Query: 159 CESLTDENKRLKKELQELQSAKAGASSPL 187
+ L EN R K L G + +
Sbjct: 133 NDKLRAENNRYKDALSNATCPNCGGPAAI 161
Score = 39 (18.8 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 194 AATCPSCEKIMRTSDEGKNA 213
A+ P+C+ + TS EG+ +
Sbjct: 487 ASNIPACDLSVITSPEGRKS 506
>ZFIN|ZDB-GENE-030328-42 [details] [associations]
symbol:pnx "posterior neuron-specific homeobox"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-030328-42 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 HSSP:P13297 HOVERGEN:HBG066288 EMBL:BC162069
EMBL:BC162454 EMBL:AB067731 IPI:IPI00491629 RefSeq:NP_840087.1
UniGene:Dr.88552 STRING:Q8AXR6 GeneID:352939 KEGG:dre:352939
CTD:352939 eggNOG:NOG325253 HOGENOM:HOG000205901 InParanoid:Q8AXR6
OrthoDB:EOG4H72D8 NextBio:20812680 Uniprot:Q8AXR6
Length = 182
Score = 115 (45.5 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 29/115 (25%), Positives = 56/115 (48%)
Query: 54 DTGRMDHNLSIGSGSKMSQDDGKAGVGNSNSKRINISGRKKLRLTIEQSRLLEDSFKLHT 113
+T + +N + +Q+ + N+++ ++ S R + T++Q R+LE SF+
Sbjct: 32 ETREISNNRESPKTTSPTQEPSAPNIANASAAKVK-SKRIRTAFTLDQLRILERSFQSSH 90
Query: 114 TLN--SKQALAEQLNLEPRQVEVWFQNRRARTKLKQNEVDCEFLKKCCESLTDEN 166
L+ + +A L L QV++WFQNRR + K + + E C + +N
Sbjct: 91 YLSVFERHCIASALGLSETQVKIWFQNRRTKWKKELDGHGGEEQSHCAPTALTQN 145
>RGD|1563858 [details] [associations]
symbol:Hesx1 "HESX homeobox 1" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003682
"chromatin binding" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0030916 "otic vesicle formation" evidence=IEA;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043584 "nose
development" evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0048853
"forebrain morphogenesis" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:1563858 GO:GO:0005634
GO:GO:0045892 GO:GO:0043565 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 CTD:8820 KO:K09354 GO:GO:0030916
GO:GO:0043584 GeneTree:ENSGT00700000104128 GO:GO:0048853
OMA:PWADTCS OrthoDB:EOG46T32J EMBL:CH474067 IPI:IPI00197102
RefSeq:NP_001102576.1 UniGene:Rn.218632 Ensembl:ENSRNOT00000019113
GeneID:498575 KEGG:rno:498575 UCSC:RGD:1563858 NextBio:700198
Uniprot:D4AEG9
Length = 185
Score = 114 (45.2 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 38/131 (29%), Positives = 70/131 (53%)
Query: 29 KDNNNKRSAARAFLDLSFTLCPKDEDTGRMDHNLSIGSGSKMSQDDGKAGVGNSNSKRIN 88
KD N + A ++SF CP +DH + K ++ A +S + ++
Sbjct: 54 KDGNPRLHAPGLPSEISFP-CP-------VDHPMPEERAPKY-ENYFSASETHSLKRELS 104
Query: 89 -ISGRK-KLRLTIEQSRLLEDSFKL--HTTLNSKQALAEQLNLEPRQVEVWFQNRRARTK 144
GR+ + T Q +LE+ F++ + ++ ++ LA++LNLE ++++WFQNRRA K
Sbjct: 105 WYRGRRPRTAFTQNQVEVLENVFRMNCYPGIDIREDLAQKLNLEEDRIQIWFQNRRA--K 162
Query: 145 LKQNEVDCEFL 155
LK++ + +FL
Sbjct: 163 LKRSRRESQFL 173
>UNIPROTKB|I3L383 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AC103702 HGNC:HGNC:5119 Ensembl:ENST00000498634
Uniprot:I3L383
Length = 128
Score = 100 (40.3 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 32/101 (31%), Positives = 50/101 (49%)
Query: 101 QSRLLEDSFKLHTTLNSKQAL--AEQLNLEPRQVEVWFQNRRARTKLKQNEVDCEFLKKC 158
Q+ LE F + L K+ + + L L RQV++WFQNRR + K K+N D +F
Sbjct: 6 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD-KFPSSK 63
Query: 159 CESLTDENKRLKK--ELQELQSAKAGASSPLFIQLQKAATC 197
CE E ++L++ E + A+ G +Q A +C
Sbjct: 64 CEQEELEKQKLERAPEAADEGDAQKGDKKNGSVQGPWAGSC 104
>UNIPROTKB|E2RDU9 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173
"limb development" evidence=IEA] [GO:0060021 "palate development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001757
"somite specification" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 GO:GO:0007519 GO:GO:0001757
GeneTree:ENSGT00660000095141 KO:K09322 CTD:4223 OMA:DHTLFGC
EMBL:AAEX03009347 RefSeq:XP_539446.2 Ensembl:ENSCAFT00000003805
GeneID:482329 KEGG:cfa:482329 NextBio:20856948 Uniprot:E2RDU9
Length = 303
Score = 119 (46.9 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 33/82 (40%), Positives = 42/82 (51%)
Query: 66 SGSKMSQDDGKAGVGNSNSKRINISGRK-KLRLTIEQSRLLEDSFKLHTTLNS--KQALA 122
SG K D + GN S+ +N RK + T EQ R LE F H L + +A
Sbjct: 162 SGGKRKSDSSDSQEGNYKSE-VNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIA 220
Query: 123 EQLNLEPRQVEVWFQNRRARTK 144
L+L RQV+VWFQNRR + K
Sbjct: 221 VNLDLTERQVKVWFQNRRMKWK 242
>UNIPROTKB|F1SEJ3 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0060021 "palate development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001757
"somite specification" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 GO:GO:0007519 GO:GO:0001757
GeneTree:ENSGT00660000095141 KO:K09322 OMA:DHTLFGC EMBL:FP565218
RefSeq:XP_003482725.1 Ensembl:ENSSSCT00000016732 GeneID:100736898
KEGG:ssc:100736898 Uniprot:F1SEJ3
Length = 303
Score = 119 (46.9 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 33/82 (40%), Positives = 42/82 (51%)
Query: 66 SGSKMSQDDGKAGVGNSNSKRINISGRK-KLRLTIEQSRLLEDSFKLHTTLNS--KQALA 122
SG K D + GN S+ +N RK + T EQ R LE F H L + +A
Sbjct: 162 SGGKRKSDSSDSQEGNYKSE-VNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIA 220
Query: 123 EQLNLEPRQVEVWFQNRRARTK 144
L+L RQV+VWFQNRR + K
Sbjct: 221 VNLDLTERQVKVWFQNRRMKWK 242
>UNIPROTKB|P50222 [details] [associations]
symbol:MEOX2 "Homeobox protein MOX-2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0001757 "somite specification" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008015 "blood
circulation" evidence=TAS] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005737 GO:GO:0008015
GO:GO:0016607 GO:GO:0043565 GO:GO:0003700 GO:GO:0001525
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0060021 GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519
GO:GO:0001757 HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322
EMBL:X82629 EMBL:L36328 EMBL:AC005550 EMBL:AC004452 EMBL:BC017021
IPI:IPI00030729 PIR:A55641 PIR:A56837 RefSeq:NP_005915.2
UniGene:Hs.170355 ProteinModelPortal:P50222 SMR:P50222
IntAct:P50222 MINT:MINT-202865 STRING:P50222 PhosphoSite:P50222
DMDM:93141286 PRIDE:P50222 DNASU:4223 Ensembl:ENST00000262041
GeneID:4223 KEGG:hsa:4223 UCSC:uc003stc.3 CTD:4223
GeneCards:GC07M015617 H-InvDB:HIX0006493 HGNC:HGNC:7014 MIM:600535
neXtProt:NX_P50222 PharmGKB:PA30748 InParanoid:P50222 OMA:DHTLFGC
OrthoDB:EOG4PZJ7H PhylomeDB:P50222 GenomeRNAi:4223 NextBio:16667
ArrayExpress:P50222 Bgee:P50222 CleanEx:HS_MEOX2
Genevestigator:P50222 GermOnline:ENSG00000106511 Uniprot:P50222
Length = 304
Score = 119 (46.9 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 33/82 (40%), Positives = 42/82 (51%)
Query: 66 SGSKMSQDDGKAGVGNSNSKRINISGRK-KLRLTIEQSRLLEDSFKLHTTLNS--KQALA 122
SG K D + GN S+ +N RK + T EQ R LE F H L + +A
Sbjct: 163 SGGKRKSDSSDSQEGNYKSE-VNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIA 221
Query: 123 EQLNLEPRQVEVWFQNRRARTK 144
L+L RQV+VWFQNRR + K
Sbjct: 222 VNLDLTERQVKVWFQNRRMKWK 243
>ZFIN|ZDB-GENE-980526-532 [details] [associations]
symbol:hoxc3a "homeo box C3a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-980526-532
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104161 HOGENOM:HOG000252944 EMBL:BX005254
EMBL:BC095299 EMBL:BC165158 IPI:IPI00931602 UniGene:Dr.132202
UniGene:Dr.510 SMR:Q503K0 Ensembl:ENSDART00000082472
HOVERGEN:HBG096057 InParanoid:Q503K0 Uniprot:Q503K0
Length = 254
Score = 117 (46.2 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 50/160 (31%), Positives = 73/160 (45%)
Query: 44 LSFTLCPKDEDTGRMDHNLSIG---SG-SKMSQDDGKAGVGNSNSKRINISGRKKLRLTI 99
LS P +T H SI SG SK S +G+A V NS+SKR ++ L +
Sbjct: 107 LSTMKYPWMRETHAPTHFSSINAMESGDSKYS--NGEAVVRNSSSKRARVAFTSSQLLEL 164
Query: 100 EQSRLLEDSFKLHTTLNSKQALAEQLNLEPRQVEVWFQNRRARTKLKQNEVDCEFLKKCC 159
E+ E F + N + +AE L L RQ+++WFQNRR K K++ + K
Sbjct: 165 EK----EFHFSAYLCRNRRLEMAELLKLTDRQIKIWFQNRRM--KYKKDHKEKSTAKSSY 218
Query: 160 ESLTDENKRLKKELQELQSAKAGASSPLFIQLQKAATCPS 199
L EN Q L +++ SP+ ++ Q PS
Sbjct: 219 TYLGTEN-------QPLIISRSTTDSPVPLKFQNNYETPS 251
>UNIPROTKB|F1NF72 [details] [associations]
symbol:F1NF72 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0030902 "hindbrain
development" evidence=IEA] [GO:0030917 "midbrain-hindbrain boundary
development" evidence=IEA] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=IEA] [GO:0043473 "pigmentation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] InterPro:IPR000047 InterPro:IPR000747
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00026 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00680000099870
PROSITE:PS00033 InterPro:IPR019549 InterPro:IPR019737 Pfam:PF10525
EMBL:AADN02016916 IPI:IPI00812139 Ensembl:ENSGALT00000019794
OMA:ASNDEKR Uniprot:F1NF72
Length = 100
Score = 99 (39.9 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 20/55 (36%), Positives = 35/55 (63%)
Query: 92 RKKLRLTIEQSRLLEDSFKL--HTTLNSKQALAEQLNLEPRQVEVWFQNRRARTK 144
R + T EQ + L+ F+ + T +Q+LA++L+L Q+++WFQN+RA+ K
Sbjct: 5 RPRTAFTAEQLQRLKAEFQANRYITEQRRQSLAQELSLNESQIKIWFQNKRAKIK 59
>UNIPROTKB|H9L2H7 [details] [associations]
symbol:Gga.20677 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:AADN02023992
Ensembl:ENSGALT00000035897 Uniprot:H9L2H7
Length = 95
Score = 99 (39.9 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 90 SGRKK-LRLTIEQSRLLEDSF--KLHTTLNSKQALAEQLNLEPRQVEVWFQNRRARTKLK 146
SGRKK T Q+ LE F ++ T + +++ +NL RQV++WFQNRR + K K
Sbjct: 20 SGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMKLK-K 78
Query: 147 QN 148
N
Sbjct: 79 MN 80
>UNIPROTKB|H9L2H8 [details] [associations]
symbol:Gga.20677 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:AADN02023992
Ensembl:ENSGALT00000035898 Uniprot:H9L2H8
Length = 99
Score = 99 (39.9 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 90 SGRKK-LRLTIEQSRLLEDSF--KLHTTLNSKQALAEQLNLEPRQVEVWFQNRRARTKLK 146
SGRKK T Q+ LE F ++ T + +++ +NL RQV++WFQNRR + K K
Sbjct: 24 SGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMKLK-K 82
Query: 147 QN 148
N
Sbjct: 83 MN 84
>WB|WBGene00000432 [details] [associations]
symbol:ceh-7 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00680000099870
EMBL:AF091459 EMBL:Z66494 PIR:S05708 PIR:T43646 RefSeq:NP_495848.1
UniGene:Cel.9303 ProteinModelPortal:P20270 SMR:P20270
EnsemblMetazoa:C34C6.8 GeneID:174391 KEGG:cel:CELE_C34C6.8
UCSC:C34C6.8 CTD:174391 WormBase:C34C6.8 eggNOG:NOG298372
HOGENOM:HOG000294138 InParanoid:P20270 OMA:RRIRMRR NextBio:883830
Uniprot:P20270
Length = 84
Score = 99 (39.9 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 92 RKKLRLTIEQSRLLEDSF--KLHTTLNSKQALAEQLNLEPRQVEVWFQNRRARTKLKQNE 149
R++ T+EQ LLE F + + ++ LA L+L+ QV++WFQNRR R + + N+
Sbjct: 25 RRRTTFTVEQLYLLEMYFAQSQYVGCDERERLARILSLDEYQVKIWFQNRRIRMRREANK 84
>WB|WBGene00022837 [details] [associations]
symbol:ceh-45 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009792 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:P06601
eggNOG:NOG247162 KO:K09324 GeneTree:ENSGT00700000104273
EMBL:FO081672 RefSeq:NP_490823.1 ProteinModelPortal:Q9N4L2
SMR:Q9N4L2 IntAct:Q9N4L2 MINT:MINT-6670607 EnsemblMetazoa:ZK993.1
GeneID:171689 KEGG:cel:CELE_ZK993.1 UCSC:ZK993.1 CTD:171689
WormBase:ZK993.1 HOGENOM:HOG000018606 InParanoid:Q9N4L2 OMA:SECDESD
NextBio:872315 Uniprot:Q9N4L2
Length = 229
Score = 115 (45.5 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 38/108 (35%), Positives = 57/108 (52%)
Query: 90 SGRKKLRLTI---EQSRLLEDSFKL--HTTLNSKQALAEQLNLEPRQVEVWFQNRRARTK 144
S RK+ TI EQ +LE +F + +++ LA Q +L+ +VEVWF+NRRA+ +
Sbjct: 106 SRRKRRHRTIFSEEQLNILETTFSTTHYPDATTREELAVQCSLKEERVEVWFKNRRAKER 165
Query: 145 LKQNEVDCEFLK------KCCESLTDENKRLKKELQELQSAKAGASSP 186
KQ + D K +C ES DE+ R K ++ S+ SSP
Sbjct: 166 -KQKKDDSRTSKHSGDDSECDES--DEDTRKVKRIKRENSSGKETSSP 210
>UNIPROTKB|P15142 [details] [associations]
symbol:CHOX-7 "Homeobox protein CHOX-7" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:X16159 IPI:IPI00683482 PIR:S05005
UniGene:Gga.190 ProteinModelPortal:P15142 SMR:P15142
HOVERGEN:HBG100178 Uniprot:P15142
Length = 124
Score = 98 (39.6 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 25/64 (39%), Positives = 35/64 (54%)
Query: 90 SGRKKLRLTIEQSRLLEDSF--KLHTTLNSKQALAEQLNLEPRQVEVWFQNRRARTK-LK 146
S R++ T EQ LE F K + +L + +A L L QV++WFQNRRA+ K +K
Sbjct: 24 SRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRIK 83
Query: 147 QNEV 150
V
Sbjct: 84 AGNV 87
>UNIPROTKB|P24341 [details] [associations]
symbol:HOXD10 "Homeobox protein Hox-D10" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:D10287 IPI:IPI00593695
PIR:A37914 UniGene:Gga.20677 ProteinModelPortal:P24341 SMR:P24341
eggNOG:KOG0487 Uniprot:P24341
Length = 95
Score = 98 (39.6 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 90 SGRKK-LRLTIEQSRLLEDSF--KLHTTLNSKQALAEQLNLEPRQVEVWFQNRRARTKLK 146
SGRKK T Q+ LE F ++ T + +++ +NL RQV++WFQNRR + K
Sbjct: 20 SGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRMKLKKM 79
Query: 147 QNE 149
E
Sbjct: 80 SRE 82
>UNIPROTKB|J9P7F8 [details] [associations]
symbol:NOTO "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 EMBL:AAEX03010974
Ensembl:ENSCAFT00000046319 OMA:WAPAEEL Uniprot:J9P7F8
Length = 123
Score = 98 (39.6 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 92 RKKLR--LTIEQSRLLEDSF-KLHTTLNSKQA-LAEQLNLEPRQVEVWFQNRRARTKLKQ 147
+K++R ++Q LE+ F K H + K+A LA +LNL QV +WFQNRR + + +Q
Sbjct: 29 QKRVRTIFNLKQLEELENVFTKQHNLVGKKRAQLAARLNLTENQVRIWFQNRRVKYQKQQ 88
>WB|WBGene00000430 [details] [associations]
symbol:ceh-5 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:Z81036 PIR:S05706 PIR:T19335 RefSeq:NP_492586.2
ProteinModelPortal:P20269 SMR:P20269 EnsemblMetazoa:C16C2.1
GeneID:191616 KEGG:cel:CELE_C16C2.1 UCSC:C16C2.1 CTD:191616
WormBase:C16C2.1 eggNOG:NOG309408 GeneTree:ENSGT00680000099870
HOGENOM:HOG000017392 InParanoid:P20269 OMA:QNYWTAA NextBio:949690
Uniprot:P20269
Length = 134
Score = 98 (39.6 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 26/55 (47%), Positives = 32/55 (58%)
Query: 92 RKKLRLTIEQSRLLEDSFKLHTTLN-SKQA-LAEQLNLEPRQVEVWFQNRRARTK 144
R + T EQ LE+SF L+ S +A LAE L L QV+VWFQNRR + K
Sbjct: 37 RPRTVFTDEQLEKLEESFNTSGYLSGSTRAKLAESLGLSDNQVKVWFQNRRTKQK 91
>TAIR|locus:2134088 [details] [associations]
symbol:HB-8 "AT4G32880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0010089 "xylem development"
evidence=RCA;IMP] [GO:0045597 "positive regulation of cell
differentiation" evidence=IMP] [GO:0009733 "response to auxin
stimulus" evidence=IEP] [GO:0010014 "meristem initiation"
evidence=RCA;IMP] [GO:0010072 "primary shoot apical meristem
specification" evidence=RCA;IMP] [GO:0010067 "procambium
histogenesis" evidence=IEP] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009880 "embryonic pattern specification" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0010090 "trichome
morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0010431 "seed maturation" evidence=RCA] [GO:0010638 "positive
regulation of organelle organization" evidence=RCA] [GO:0016049
"cell growth" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042546 "cell wall biogenesis"
evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
process" evidence=RCA] [GO:0045010 "actin nucleation" evidence=RCA]
[GO:0045595 "regulation of cell differentiation" evidence=RCA]
[GO:0048589 "developmental growth" evidence=RCA] [GO:0048765 "root
hair cell differentiation" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] InterPro:IPR001356 InterPro:IPR004827
InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00338 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
GO:GO:0030154 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733
GO:GO:0008284 GO:GO:0043565 GO:GO:0045597 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010072
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 GO:GO:0010089 KO:K09338 HSSP:P10037
HOGENOM:HOG000272677 ProtClustDB:CLSN2679470 InterPro:IPR013978
Pfam:PF08670 EMBL:AL161582 EMBL:Z50851 EMBL:AJ441292 EMBL:AY099631
EMBL:BT008798 IPI:IPI00546637 PIR:T10695 RefSeq:NP_195014.1
UniGene:At.31628 ProteinModelPortal:Q39123 SMR:Q39123 IntAct:Q39123
STRING:Q39123 PaxDb:Q39123 PRIDE:Q39123 EnsemblPlants:AT4G32880.1
GeneID:829424 KEGG:ath:AT4G32880 TAIR:At4g32880 eggNOG:NOG325934
InParanoid:Q39123 OMA:DAVMCCS PhylomeDB:Q39123
Genevestigator:Q39123 GO:GO:0010067 Uniprot:Q39123
Length = 833
Score = 123 (48.4 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 42/142 (29%), Positives = 70/142 (49%)
Query: 78 GVGNSNSKRINISGRKKLRLTIEQSRLLEDSFK---LHTTLNSKQALAE---QLNLEPRQ 131
G G++NS N+ K +R T EQ LE + +++ +Q + E N+EP+Q
Sbjct: 2 GGGSNNSH--NMDNGKYVRYTPEQVEALERLYNDCPKPSSMRRQQLIRECPILSNIEPKQ 59
Query: 132 VEVWFQNRRARTKLKQNEVDCEFLKKCCES----LTDENKRLKKELQELQSAKAGASSPL 187
++VWFQNRR R K ++ + + + + L +EN RL+K++ L +
Sbjct: 60 IKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENSYFRQHP 119
Query: 188 FIQLQKAATCPSCEKIMRTSDE 209
Q A T SCE ++ TS +
Sbjct: 120 QNQGNLATTDTSCESVV-TSGQ 140
>UNIPROTKB|F1MPM0 [details] [associations]
symbol:HESX1 "Homeobox 1" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0048853 "forebrain
morphogenesis" evidence=IEA] [GO:0047485 "protein N-terminus
binding" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043584 "nose
development" evidence=IEA] [GO:0030916 "otic vesicle formation"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0043565
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
CTD:8820 KO:K09354 GO:GO:0030916 GO:GO:0043584
GeneTree:ENSGT00700000104128 GO:GO:0048853 OMA:PWADTCS
EMBL:DAAA02054314 EMBL:JQ711178 IPI:IPI00710649
RefSeq:NP_001178069.1 UniGene:Bt.32880 Ensembl:ENSBTAT00000001886
GeneID:781811 KEGG:bta:781811 NextBio:20925056 Uniprot:F1MPM0
Length = 185
Score = 111 (44.1 bits), Expect = 0.00011, P = 0.00011
Identities = 24/66 (36%), Positives = 44/66 (66%)
Query: 92 RKKLRLTIEQSRLLEDSFKL--HTTLNSKQALAEQLNLEPRQVEVWFQNRRARTKLKQNE 149
R + T Q +LE+ F++ + ++ ++ LA++LNLE ++++WFQNRRA KLK++
Sbjct: 110 RPRTAFTQNQIEVLENVFRVNCYPGIDIREDLAQKLNLEEDRIQIWFQNRRA--KLKRSH 167
Query: 150 VDCEFL 155
+ +FL
Sbjct: 168 RESQFL 173
>UNIPROTKB|Q9UBX0 [details] [associations]
symbol:HESX1 "Homeobox expressed in ES cells 1"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0030916 "otic vesicle formation" evidence=IEA]
[GO:0043584 "nose development" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0048853
"forebrain morphogenesis" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003677 "DNA binding" evidence=TAS] [GO:0007420
"brain development" evidence=TAS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0045892
GO:GO:0007420 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
CTD:8820 eggNOG:NOG326168 HOGENOM:HOG000112889 HOVERGEN:HBG004226
KO:K09354 GO:GO:0030916 GO:GO:0043584 GO:GO:0048853 Orphanet:95494
EMBL:AF059734 EMBL:U82811 EMBL:U65437 EMBL:BC069515 EMBL:BC093979
EMBL:BC112089 IPI:IPI00002815 RefSeq:NP_003856.1 UniGene:Hs.171980
PDB:2K40 PDBsum:2K40 ProteinModelPortal:Q9UBX0 SMR:Q9UBX0
STRING:Q9UBX0 DMDM:12230168 PRIDE:Q9UBX0 DNASU:8820
Ensembl:ENST00000295934 GeneID:8820 KEGG:hsa:8820 UCSC:uc003din.4
GeneCards:GC03M057207 HGNC:HGNC:4877 HPA:HPA024187 MIM:182230
MIM:262600 MIM:601802 neXtProt:NX_Q9UBX0 Orphanet:226307
Orphanet:95496 Orphanet:3157 PharmGKB:PA29255 InParanoid:Q9UBX0
OMA:PWADTCS OrthoDB:EOG46T32J PhylomeDB:Q9UBX0 ChiTaRS:HESX1
EvolutionaryTrace:Q9UBX0 GenomeRNAi:8820 NextBio:33086
ArrayExpress:Q9UBX0 Bgee:Q9UBX0 CleanEx:HS_HESX1
Genevestigator:Q9UBX0 GermOnline:ENSG00000163666 Uniprot:Q9UBX0
Length = 185
Score = 111 (44.1 bits), Expect = 0.00011, P = 0.00011
Identities = 24/66 (36%), Positives = 44/66 (66%)
Query: 92 RKKLRLTIEQSRLLEDSFKL--HTTLNSKQALAEQLNLEPRQVEVWFQNRRARTKLKQNE 149
R + T Q +LE+ F++ + ++ ++ LA++LNLE ++++WFQNRRA KLK++
Sbjct: 110 RPRTAFTQNQIEVLENVFRVNCYPGIDIREDLAQKLNLEEDRIQIWFQNRRA--KLKRSH 167
Query: 150 VDCEFL 155
+ +FL
Sbjct: 168 RESQFL 173
>TAIR|locus:2127008 [details] [associations]
symbol:ANL2 "ANTHOCYANINLESS 2" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043481 "anthocyanin accumulation in tissues in
response to UV light" evidence=IMP] [GO:0048364 "root development"
evidence=IMP] [GO:0048765 "root hair cell differentiation"
evidence=IMP] [GO:0006473 "protein acetylation" evidence=RCA]
[GO:0042335 "cuticle development" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0043481 GO:GO:0042335 Gene3D:1.10.10.60
SUPFAM:SSF46689 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
EMBL:AF058919 EMBL:AL161472 EMBL:U85254 EMBL:AF077335 EMBL:AK226968
IPI:IPI00538459 PIR:T01237 RefSeq:NP_567183.2 UniGene:At.24442
ProteinModelPortal:Q0WV12 SMR:Q0WV12 STRING:Q0WV12 PaxDb:Q0WV12
PRIDE:Q0WV12 EnsemblPlants:AT4G00730.1 GeneID:828022
KEGG:ath:AT4G00730 TAIR:At4g00730 eggNOG:euNOG18333
HOGENOM:HOG000243256 InParanoid:Q0WV12 OMA:MAGTING PhylomeDB:Q0WV12
ProtClustDB:CLSN2685237 Genevestigator:Q0WV12 GO:GO:0048765
Uniprot:Q0WV12
Length = 802
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 49/184 (26%), Positives = 76/184 (41%)
Query: 8 NTGLCLGLGVGEHAAGRHERPKDNNNKRSAARAFLDLSFTLCPKDEDTGRMDHNLSIGSG 67
++GL L L E R E NNN D S ++E+ H GS
Sbjct: 62 SSGLSLALEQPERGTNRGEASMRNNNNVGGGGDTFDGSVNRRSREEE-----HESRSGS- 115
Query: 68 SKMSQDDGKAGVGNSNSKRINISGRKKL--RLTIEQSRLLEDSFKL--HTTLNSKQALAE 123
D G+ + + RKK R T +Q + LE FK H + L++
Sbjct: 116 ------DNVEGISGEDQDAADKPPRKKRYHRHTPQQIQELESMFKECPHPDEKQRLELSK 169
Query: 124 QLNLEPRQVEVWFQNRRARTKLKQNEVDCEFLKKCCESLTDENKRLKKELQELQSAKAGA 183
+L LE RQV+ WFQNRR + K + + L++ + L EN +++ ++ G
Sbjct: 170 RLCLETRQVKFWFQNRRTQMKTQLERHENALLRQENDKLRAENMSIREAMRNPICTNCGG 229
Query: 184 SSPL 187
+ L
Sbjct: 230 PAML 233
>UNIPROTKB|F1NHF8 [details] [associations]
symbol:CDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 EMBL:AADN02013531
IPI:IPI00819450 Ensembl:ENSGALT00000039481 Uniprot:F1NHF8
Length = 60
Score = 97 (39.2 bits), Expect = 0.00012, P = 0.00012
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 92 RKKLRLTI-EQSRL-LEDSFKL--HTTLNSKQALAEQLNLEPRQVEVWFQNRRARTK 144
R+K R+ + RL LE F + T+ K LA L L RQV++WFQNRRA+ +
Sbjct: 1 REKYRVVYTDHQRLELEKEFHYNRYITIRRKSELAANLRLSERQVKIWFQNRRAKER 57
>RGD|1586211 [details] [associations]
symbol:Hoxb8 "homeo box B8" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007625 "grooming behavior" evidence=ISO]
[GO:0008344 "adult locomotory behavior" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=ISO]
[GO:0019233 "sensory perception of pain" evidence=ISO] [GO:0021516
"dorsal spinal cord development" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=ISO] [GO:0048705 "skeletal system
morphogenesis" evidence=ISO] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1586211 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0045638 eggNOG:NOG314669 EMBL:M37565
IPI:IPI00476117 PIR:A43559 UniGene:Rn.231433
ProteinModelPortal:P18863 SMR:P18863 STRING:P18863 UCSC:RGD:1586211
Genevestigator:P18863 Uniprot:P18863
Length = 92
Score = 97 (39.2 bits), Expect = 0.00012, P = 0.00012
Identities = 26/73 (35%), Positives = 40/73 (54%)
Query: 101 QSRLLEDSFKLHTTLNSKQAL--AEQLNLEPRQVEVWFQNRRARTKLKQNEVDCEFLKKC 158
Q+ LE F + L K+ + + L L RQV++WFQNRR + K K+N D +F
Sbjct: 22 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD-KFPSSK 79
Query: 159 CESLTDENKRLKK 171
CE E ++L++
Sbjct: 80 CEQEELEKEKLER 92
>ZFIN|ZDB-GENE-050417-97 [details] [associations]
symbol:dmbx1b "diencephalon/mesencephalon homeobox
1b" species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IMP] [GO:0050767 "regulation of neurogenesis"
evidence=IGI;IMP] [GO:0051726 "regulation of cell cycle"
evidence=IMP] [GO:0030901 "midbrain development" evidence=IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-050417-97 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0051726 GO:GO:0060041
GO:GO:0030901 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104128 GO:GO:0050767 HSSP:P06601
eggNOG:NOG238265 HOGENOM:HOG000261650 HOVERGEN:HBG061416
OrthoDB:EOG4BCDNN EMBL:DQ317638 EMBL:BC093284 IPI:IPI00487260
RefSeq:NP_001017625.1 UniGene:Dr.91498 ProteinModelPortal:Q566X8
SMR:Q566X8 Ensembl:ENSDART00000026693 GeneID:550288 KEGG:dre:550288
CTD:550288 InParanoid:Q566X8 OMA:EDNADRE NextBio:20879549
Bgee:Q566X8 Uniprot:Q566X8
Length = 369
Score = 117 (46.2 bits), Expect = 0.00014, P = 0.00014
Identities = 41/125 (32%), Positives = 63/125 (50%)
Query: 92 RKKLRLTIEQSRLLEDSF-KLH-TTLNSKQALAEQLNLEPRQVEVWFQNRRARTKLKQNE 149
R + T +Q LE +F K H + ++ LA NL +V+VWF+NRRA+ + KQ
Sbjct: 68 RSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQRS 127
Query: 150 VDCEFLKKCCESLTDENKRLKKELQELQSAKAGASSPLFIQ-LQKAATCPSCEKIMRTSD 208
+ E L++ E+ T+ + KE A+A SPL + L A +C E++ TS
Sbjct: 128 LQKEQLQRLKEAGTEGAQDEGKEEAPPVEAQA-PPSPLDGRGLTSAPSCELNEEVNVTSP 186
Query: 209 EGKNA 213
E A
Sbjct: 187 EQSGA 191
>UNIPROTKB|I3LKM5 [details] [associations]
symbol:HESX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048853 "forebrain
morphogenesis" evidence=IEA] [GO:0047485 "protein N-terminus
binding" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043584 "nose
development" evidence=IEA] [GO:0030916 "otic vesicle formation"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0043565
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
KO:K09354 GO:GO:0030916 GO:GO:0043584 GeneTree:ENSGT00700000104128
GO:GO:0048853 OMA:PWADTCS RefSeq:XP_003361214.1
Ensembl:ENSSSCT00000031271 GeneID:100623612 KEGG:ssc:100623612
Uniprot:I3LKM5
Length = 185
Score = 110 (43.8 bits), Expect = 0.00015, P = 0.00015
Identities = 24/66 (36%), Positives = 43/66 (65%)
Query: 92 RKKLRLTIEQSRLLEDSFKL--HTTLNSKQALAEQLNLEPRQVEVWFQNRRARTKLKQNE 149
R + T Q +LE+ F++ + ++ ++ LA +LNLE ++++WFQNRRA KLK++
Sbjct: 110 RPRTAFTQNQIEMLENVFRVNCYPGIDIREDLARKLNLEEDRIQIWFQNRRA--KLKRSH 167
Query: 150 VDCEFL 155
+ +FL
Sbjct: 168 RESQFL 173
>UNIPROTKB|Q2PYN8 [details] [associations]
symbol:lbx1 "Transcription factor LBX1" species:8355
"Xenopus laevis" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0007517 "muscle organ development"
evidence=IMP] [GO:0051450 "myoblast proliferation" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0030154 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0000122 GO:GO:0007517 GO:GO:0000976 HSSP:P06601 GO:GO:0051450
CTD:10660 HOVERGEN:HBG006244 KO:K09353 EMBL:DQ294722
RefSeq:NP_001089192.1 UniGene:Xl.55973 ProteinModelPortal:Q2PYN8
GeneID:734237 KEGG:xla:734237 Xenbase:XB-GENE-6251676
Uniprot:Q2PYN8
Length = 267
Score = 114 (45.2 bits), Expect = 0.00017, P = 0.00017
Identities = 43/154 (27%), Positives = 69/154 (44%)
Query: 37 AARAFLDLSFTLCPKDEDTGRMDHNLSIGSGSKMSQDDGKAGVGNSNSKRINISGRK-KL 95
++RA L + LC +E + L + S + +G+ G+ ++ RK +
Sbjct: 76 SSRALLSQTSPLCALEELASKTFKGLEV---SVLQAAEGRDGMTIFGQRQTPKKRRKSRT 132
Query: 96 RLTIEQSRLLEDSFKLHTTLN--SKQALAEQLNLEPRQVEVWFQNRRARTK--LKQNEVD 151
T Q LE F L+ + +A+QL L QV WFQNRRA+ K L++ + D
Sbjct: 133 AFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKAD 192
Query: 152 CEFLKKCCESLTDENKRLKKELQELQSAKAGASS 185
E KK S + + EL+E S + + S
Sbjct: 193 VESTKKMSPSAVEAVLTIS-ELEESGSERGNSRS 225
>UNIPROTKB|F1N8D2 [details] [associations]
symbol:HESX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 IPI:IPI00575485 GeneTree:ENSGT00700000104128
EMBL:AADN02014018 Ensembl:ENSGALT00000008836
Ensembl:ENSGALT00000036259 Uniprot:F1N8D2
Length = 193
Score = 110 (43.8 bits), Expect = 0.00018, P = 0.00018
Identities = 24/66 (36%), Positives = 44/66 (66%)
Query: 92 RKKLRLTIEQSRLLEDSFKLHTT--LNSKQALAEQLNLEPRQVEVWFQNRRARTKLKQNE 149
R + T Q +LE+ FK+++ ++ ++ LA +L+LE ++++WFQNRRA KLK++
Sbjct: 118 RPRTAFTRNQIEVLENVFKMNSYPGIDIREELARKLDLEEDRIQIWFQNRRA--KLKRSH 175
Query: 150 VDCEFL 155
+ +FL
Sbjct: 176 RESQFL 181
>UNIPROTKB|P79775 [details] [associations]
symbol:P79775 "Homeobox protein ANF-1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:U65436 IPI:IPI00575485
RefSeq:NP_990343.1 UniGene:Gga.32344 ProteinModelPortal:P79775
STRING:P79775 GeneID:395864 KEGG:gga:395864 CTD:8820
eggNOG:NOG326168 HOGENOM:HOG000112889 HOVERGEN:HBG004226 KO:K09354
NextBio:20815931 Uniprot:P79775
Length = 196
Score = 110 (43.8 bits), Expect = 0.00020, P = 0.00020
Identities = 24/66 (36%), Positives = 44/66 (66%)
Query: 92 RKKLRLTIEQSRLLEDSFKLHTT--LNSKQALAEQLNLEPRQVEVWFQNRRARTKLKQNE 149
R + T Q +LE+ FK+++ ++ ++ LA +L+LE ++++WFQNRRA KLK++
Sbjct: 121 RPRTAFTRNQIEVLENVFKMNSYPGIDIREELARKLDLEEDRIQIWFQNRRA--KLKRSH 178
Query: 150 VDCEFL 155
+ +FL
Sbjct: 179 RESQFL 184
>UNIPROTKB|E2R1U3 [details] [associations]
symbol:HESX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048853
"forebrain morphogenesis" evidence=IEA] [GO:0047485 "protein
N-terminus binding" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0043584 "nose
development" evidence=IEA] [GO:0030916 "otic vesicle formation"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0043565
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0030916 GO:GO:0043584 GeneTree:ENSGT00700000104128
GO:GO:0048853 OMA:PWADTCS EMBL:AAEX03012167
Ensembl:ENSCAFT00000012770 Uniprot:E2R1U3
Length = 185
Score = 109 (43.4 bits), Expect = 0.00021, P = 0.00021
Identities = 24/66 (36%), Positives = 43/66 (65%)
Query: 92 RKKLRLTIEQSRLLEDSFKL--HTTLNSKQALAEQLNLEPRQVEVWFQNRRARTKLKQNE 149
R + T Q +LE+ F++ + ++ ++ LA +LNLE ++++WFQNRRA KLK++
Sbjct: 110 RPRTAFTQNQIEVLENVFRVNCYPGIDIREDLARKLNLEEDRIQIWFQNRRA--KLKRSH 167
Query: 150 VDCEFL 155
+ +FL
Sbjct: 168 RESQFL 173
>MGI|MGI:96071 [details] [associations]
symbol:Hesx1 "homeobox gene expressed in ES cells"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007420
"brain development" evidence=IMP] [GO:0008022 "protein C-terminus
binding" evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=NAS] [GO:0030916 "otic vesicle formation" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043584 "nose development" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0048853
"forebrain morphogenesis" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96071 GO:GO:0005634
GO:GO:0045892 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0008134
CTD:8820 eggNOG:NOG326168 HOGENOM:HOG000112889 HOVERGEN:HBG004226
KO:K09354 EMBL:AC124603 GO:GO:0030916 GO:GO:0043584
GeneTree:ENSGT00700000104128 GO:GO:0048853 OMA:PWADTCS
OrthoDB:EOG46T32J EMBL:X80040 EMBL:U40720 EMBL:AK082831
EMBL:BC132051 EMBL:BC132053 EMBL:BC145262 IPI:IPI00123659
IPI:IPI00310700 PIR:A55882 RefSeq:NP_034550.2 UniGene:Mm.4802
ProteinModelPortal:Q61658 STRING:Q61658 PRIDE:Q61658
Ensembl:ENSMUST00000035433 GeneID:15209 KEGG:mmu:15209
InParanoid:Q61658 NextBio:287773 CleanEx:MM_HESX1
Genevestigator:Q61658 GermOnline:ENSMUSG00000040726 Uniprot:Q61658
Length = 185
Score = 109 (43.4 bits), Expect = 0.00021, P = 0.00021
Identities = 23/66 (34%), Positives = 44/66 (66%)
Query: 92 RKKLRLTIEQSRLLEDSFKL--HTTLNSKQALAEQLNLEPRQVEVWFQNRRARTKLKQNE 149
R + T Q +LE+ F++ + ++ ++ LA++LNLE ++++WFQNRRA K+K++
Sbjct: 110 RPRTAFTQNQVEVLENVFRVNCYPGIDIREDLAQKLNLEEDRIQIWFQNRRA--KMKRSR 167
Query: 150 VDCEFL 155
+ +FL
Sbjct: 168 RESQFL 173
>UNIPROTKB|F1N8D1 [details] [associations]
symbol:HESX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0008022 "protein
C-terminus binding" evidence=IEA] [GO:0030916 "otic vesicle
formation" evidence=IEA] [GO:0043584 "nose development"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0047485 "protein N-terminus
binding" evidence=IEA] [GO:0048853 "forebrain morphogenesis"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0043565
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00700000104128 OMA:PWADTCS EMBL:AADN02014018
IPI:IPI00820422 Ensembl:ENSGALT00000036260 ArrayExpress:F1N8D1
Uniprot:F1N8D1
Length = 199
Score = 110 (43.8 bits), Expect = 0.00021, P = 0.00021
Identities = 24/66 (36%), Positives = 44/66 (66%)
Query: 92 RKKLRLTIEQSRLLEDSFKLHTT--LNSKQALAEQLNLEPRQVEVWFQNRRARTKLKQNE 149
R + T Q +LE+ FK+++ ++ ++ LA +L+LE ++++WFQNRRA KLK++
Sbjct: 124 RPRTAFTRNQIEVLENVFKMNSYPGIDIREELARKLDLEEDRIQIWFQNRRA--KLKRSH 181
Query: 150 VDCEFL 155
+ +FL
Sbjct: 182 RESQFL 187
>ZFIN|ZDB-GENE-020509-2 [details] [associations]
symbol:gbx2 "gastrulation brain homeo box 2"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0030902 "hindbrain development" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-020509-2 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0030902 HOVERGEN:HBG003967 KO:K09321
GeneTree:ENSGT00660000095141 CTD:2637 OMA:HQEAARK HSSP:P14653
EMBL:CR847983 EMBL:BC059413 EMBL:AB075028 IPI:IPI00494659
RefSeq:NP_694496.1 UniGene:Dr.17548 SMR:Q8QGU1 STRING:Q8QGU1
Ensembl:ENSDART00000015333 GeneID:245948 KEGG:dre:245948
InParanoid:Q8QGU1 NextBio:20797200 Uniprot:Q8QGU1
Length = 342
Score = 115 (45.5 bits), Expect = 0.00022, P = 0.00022
Identities = 38/127 (29%), Positives = 55/127 (43%)
Query: 29 KDNNNKRSAARAFLDLSFTLCPKDEDTGRMDHNLSIGSGSKMSQDDG-KAGVGNSNSKRI 87
K+++ R +D D G G GS DDG G G N+
Sbjct: 180 KEDDCHRKDESFSMDSDLDYSSDDNGPGNAMCQKEDGDGSG-GLDDGVHGGNGAGNTTST 238
Query: 88 NISGRKKLRLTIEQSRLLEDSF--KLHTTLNSKQALAEQLNLEPRQVEVWFQNRRARTK- 144
+ R++ T EQ LE F K + +L + +A L L QV++WFQNRRA+ K
Sbjct: 239 GKNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKR 298
Query: 145 LKQNEVD 151
+K V+
Sbjct: 299 VKAGNVN 305
>UNIPROTKB|F1NHM4 [details] [associations]
symbol:CDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 EMBL:AADN02013531
EMBL:AADN02013532 IPI:IPI00820756 Ensembl:ENSGALT00000039471
Uniprot:F1NHM4
Length = 60
Score = 94 (38.1 bits), Expect = 0.00026, P = 0.00026
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 92 RKKLRLTI-EQSRL-LEDSFKL--HTTLNSKQALAEQLNLEPRQVEVWFQNRRARTK 144
++K R+ + RL LE F + T+ K LA L L RQV++WFQNRRA+ +
Sbjct: 1 KEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAANLGLSERQVKIWFQNRRAKER 57
>UNIPROTKB|D6RBG8 [details] [associations]
symbol:PITX2 "Pituitary homeobox 2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231518 EMBL:AC017068 HGNC:HGNC:9005 ChiTaRS:PITX2
IPI:IPI00967695 ProteinModelPortal:D6RBG8 SMR:D6RBG8
Ensembl:ENST00000511990 ArrayExpress:D6RBG8 Bgee:D6RBG8
Uniprot:D6RBG8
Length = 118
Score = 94 (38.1 bits), Expect = 0.00026, P = 0.00026
Identities = 23/88 (26%), Positives = 44/88 (50%)
Query: 71 SQDDGKAGVGNSNSKRINISGRKKLRLTIEQSRLLEDSFKL--HTTLNSKQALAEQLNLE 128
SQ VG + + R++ T +Q + LE +F+ + +++++ +A NL
Sbjct: 20 SQQGKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLT 79
Query: 129 PRQVEVWFQNRRARTKLKQNEVDCEFLK 156
+V VWF+NRRA+ + ++ E K
Sbjct: 80 EARVRVWFKNRRAKWRKRERNQQAELCK 107
>RGD|1595784 [details] [associations]
symbol:Hoxc9 "homeobox C9" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA;ISO] [GO:0048706 "embryonic skeletal
system development" evidence=ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1595784 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
eggNOG:NOG314669 EMBL:S76301 EMBL:M37568 IPI:IPI01016344 PIR:D43559
UniGene:Rn.91646 ProteinModelPortal:P18866 SMR:P18866 STRING:P18866
UCSC:RGD:1595784 HOVERGEN:HBG107057 Genevestigator:P18866
Uniprot:P18866
Length = 108
Score = 94 (38.1 bits), Expect = 0.00026, P = 0.00026
Identities = 32/95 (33%), Positives = 49/95 (51%)
Query: 91 GRKKLRLTIE--QSRLLEDSFKLHTTLNSKQAL--AEQLNLEPRQVEVWFQNRRARTKLK 146
GR+ R T Q+ LE F + L K+ + + L L RQV++WFQNRR + K K
Sbjct: 14 GRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-K 72
Query: 147 QNEVDCEFLKKCCESLTDE-NKRLKKELQELQSAK 180
+N D + E + +E N+ +KE +E + K
Sbjct: 73 ENNKDKLPGARDEEKVEEEGNEEEEKEEEEKEENK 107
>UNIPROTKB|P18866 [details] [associations]
symbol:Hoxc8 "Homeobox protein Hox-C8" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1595784 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 eggNOG:NOG314669 EMBL:S76301 EMBL:M37568
IPI:IPI01016344 PIR:D43559 UniGene:Rn.91646
ProteinModelPortal:P18866 SMR:P18866 STRING:P18866 UCSC:RGD:1595784
HOVERGEN:HBG107057 Genevestigator:P18866 Uniprot:P18866
Length = 108
Score = 94 (38.1 bits), Expect = 0.00026, P = 0.00026
Identities = 32/95 (33%), Positives = 49/95 (51%)
Query: 91 GRKKLRLTIE--QSRLLEDSFKLHTTLNSKQAL--AEQLNLEPRQVEVWFQNRRARTKLK 146
GR+ R T Q+ LE F + L K+ + + L L RQV++WFQNRR + K K
Sbjct: 14 GRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-K 72
Query: 147 QNEVDCEFLKKCCESLTDE-NKRLKKELQELQSAK 180
+N D + E + +E N+ +KE +E + K
Sbjct: 73 ENNKDKLPGARDEEKVEEEGNEEEEKEEEEKEENK 107
>WB|WBGene00004011 [details] [associations]
symbol:pha-2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043282 "pharyngeal muscle development"
evidence=IMP] [GO:0042755 "eating behavior" evidence=IMP]
[GO:0042694 "muscle cell fate specification" evidence=IMP]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0040014 "regulation of multicellular organism
growth" evidence=IGI;IMP] [GO:0002119 "nematode larval development"
evidence=IGI] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0002119 GO:GO:0042694 GO:GO:0030036 GO:GO:0040014
GO:GO:0042755 GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009887
GO:GO:0000976 GeneTree:ENSGT00680000099625 GO:GO:0043282 KO:K08024
EMBL:FO081140 RefSeq:NP_508131.3 ProteinModelPortal:Q21578
SMR:Q21578 EnsemblMetazoa:M6.3 GeneID:187454 KEGG:cel:CELE_M6.3
UCSC:M6.3 CTD:187454 WormBase:M6.3 InParanoid:Q21578 OMA:DEDEMPN
NextBio:935326 ArrayExpress:Q21578 Uniprot:Q21578
Length = 166
Score = 106 (42.4 bits), Expect = 0.00026, P = 0.00026
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 94 KLRLTIEQSRLLEDSFKLHTTLN--SKQALAEQLNLEPRQVEVWFQNRRAR 142
++R T EQ+ LE F H L+ ++ LA+ L+L RQV+ WFQNRRA+
Sbjct: 80 QIRFTNEQTDALEHKFDSHKYLSPQERKKLAKSLSLSERQVKTWFQNRRAK 130
>UNIPROTKB|P78367 [details] [associations]
symbol:NKX3-2 "Homeobox protein Nkx-3.2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007368 "determination of left/right
symmetry" evidence=IEA] [GO:0031016 "pancreas development"
evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0048645 "organ formation" evidence=IEA] [GO:0048705 "skeletal
system morphogenesis" evidence=IEA] [GO:0048706 "embryonic skeletal
system development" evidence=IEA] [GO:0060576 "intestinal
epithelial cell development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0032331 "negative regulation of chondrocyte
differentiation" evidence=ISS] [GO:0001501 "skeletal system
development" evidence=TAS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=TAS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043066
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0006366 GO:GO:0001501
GO:GO:0007368 GO:GO:0048536 GO:GO:0031016 GO:GO:0048645
GO:GO:0048705 eggNOG:NOG279137 GO:GO:0048706 KO:K09995
GO:GO:0032331 GO:GO:0060576 GO:GO:0042474 HOGENOM:HOG000231923
HOVERGEN:HBG006689 EMBL:AF005260 EMBL:AF009801 EMBL:AF009802
EMBL:BC111966 EMBL:U89845 IPI:IPI00019228 RefSeq:NP_001180.1
UniGene:Hs.590927 ProteinModelPortal:P78367 SMR:P78367
STRING:P78367 PhosphoSite:P78367 DMDM:6016210 PRIDE:P78367
DNASU:579 Ensembl:ENST00000382438 GeneID:579 KEGG:hsa:579
UCSC:uc003gmx.2 CTD:579 GeneCards:GC04M013542 HGNC:HGNC:951
HPA:HPA027564 MIM:602183 MIM:613330 neXtProt:NX_P78367
Orphanet:228387 PharmGKB:PA162397617 InParanoid:P78367 OMA:PGGWDSD
OrthoDB:EOG4CRM13 PhylomeDB:P78367 GenomeRNAi:579 NextBio:2363
Bgee:P78367 CleanEx:HS_NKX3-2 Genevestigator:P78367
GermOnline:ENSG00000109705 Uniprot:P78367
Length = 333
Score = 114 (45.2 bits), Expect = 0.00027, P = 0.00027
Identities = 46/149 (30%), Positives = 65/149 (43%)
Query: 11 LCLGLGVGEHAAGRHERPKDNNNKRSAARAFLDLSFTLCPKDEDTG---RMDHNLSIGSG 67
L LG V E AA + ++ RS + +S P+ ED G R H ++ SG
Sbjct: 123 LSLGQPVCELAASKDL--EEEAAGRSDSEMSASVSGDRSPRTEDDGVGPRGAHVSALCSG 180
Query: 68 SKMSQDDGKAGVGNSNSKRINISGRKKL-RLTIEQSRL--LEDSFKLHTTLNSKQA--LA 122
+ G AGV + RKK R +++ LE F L+ + LA
Sbjct: 181 AGGGGGSGPAGVAEEEEEPAAPKPRKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLA 240
Query: 123 EQLNLEPRQVEVWFQNRRARTKLKQNEVD 151
L L QV++WFQNRR +TK +Q D
Sbjct: 241 ASLKLTETQVKIWFQNRRYKTKRRQMAAD 269
>UNIPROTKB|Q0P4H6 [details] [associations]
symbol:lbx1 "Transcription factor LBX1" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0007517 "muscle organ development"
evidence=ISS] [GO:0051450 "myoblast proliferation" evidence=ISS]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0030154 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0000122 GO:GO:0007517 GO:GO:0000976 GO:GO:0051450 CTD:10660
HOVERGEN:HBG006244 KO:K09353 EMBL:BC122077 RefSeq:NP_001072559.1
UniGene:Str.53738 ProteinModelPortal:Q0P4H6 GeneID:780014
KEGG:xtr:780014 Xenbase:XB-GENE-6455157 Uniprot:Q0P4H6
Length = 265
Score = 112 (44.5 bits), Expect = 0.00029, P = 0.00029
Identities = 43/144 (29%), Positives = 66/144 (45%)
Query: 37 AARAFLDLSFTLCPKDEDTGRMDHNLSIGSGSKMSQDDGKAGVGNSNSKRINISGRK-KL 95
++RA L + LC +E + L + S + +G+ G+ ++ RK +
Sbjct: 74 SSRALLSQTSPLCALEELASKTFKGLEV---SVLQAAEGRDGMTIFGQRQTPKKRRKSRT 130
Query: 96 RLTIEQSRLLEDSFKLHTTLN--SKQALAEQLNLEPRQVEVWFQNRRARTK--LKQNEVD 151
T Q LE F L+ + +A+QL L QV WFQNRRA+ K L++ + D
Sbjct: 131 AFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKAD 190
Query: 152 CEFLKKCCESLTDENKRLKKELQE 175
E +KK S T E EL+E
Sbjct: 191 VESVKKMSPS-TVEAVLTISELEE 213
>RGD|3116 [details] [associations]
symbol:Msx2 "msh homeobox 2" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA polymerase
II promoter" evidence=IEA;ISO] [GO:0000978 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding" evidence=IDA]
[GO:0000982 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0000989 "transcription factor binding transcription
factor activity" evidence=IEA;ISO] [GO:0001503 "ossification"
evidence=ISO] [GO:0001649 "osteoblast differentiation"
evidence=ISO;ISS] [GO:0002063 "chondrocyte development"
evidence=IEA;ISO] [GO:0002076 "osteoblast development"
evidence=IEA;IEP;ISO] [GO:0003148 "outflow tract septum
morphogenesis" evidence=IEA;ISO] [GO:0003151 "outflow tract
morphogenesis" evidence=ISO] [GO:0003198 "epithelial to mesenchymal
transition involved in endocardial cushion formation"
evidence=IEA;ISO] [GO:0003416 "endochondral bone growth"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription factor
complex" evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008285 "negative regulation of cell proliferation"
evidence=IEA;ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA;ISO] [GO:0023019 "signal transduction
involved in regulation of gene expression" evidence=IEA;ISO]
[GO:0030326 "embryonic limb morphogenesis" evidence=ISO] [GO:0030509
"BMP signaling pathway" evidence=ISO] [GO:0030513 "positive
regulation of BMP signaling pathway" evidence=IEA;ISO] [GO:0032792
"negative regulation of CREB transcription factor activity"
evidence=IEA;ISO] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA;ISO] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA;ISO] [GO:0035313 "wound healing, spreading of epidermal
cells" evidence=IEA;ISO] [GO:0035880 "embryonic nail plate
morphogenesis" evidence=IEA;ISO] [GO:0042060 "wound healing"
evidence=ISO] [GO:0042476 "odontogenesis" evidence=ISO] [GO:0042640
"anagen" evidence=IEA;ISO] [GO:0042733 "embryonic digit
morphogenesis" evidence=ISO] [GO:0042981 "regulation of apoptotic
process" evidence=ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO;ISS] [GO:0045599 "negative
regulation of fat cell differentiation" evidence=IEA;ISO] [GO:0045617
"negative regulation of keratinocyte differentiation"
evidence=IEA;ISO] [GO:0045669 "positive regulation of osteoblast
differentiation" evidence=IEA;ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=ISO;ISS] [GO:0048863 "stem
cell differentiation" evidence=IEA;ISO] [GO:0051216 "cartilage
development" evidence=ISO;IMP] [GO:0051795 "positive regulation of
catagen" evidence=IEA;ISO] [GO:0060346 "bone trabecula formation"
evidence=IEA;ISO] [GO:0060349 "bone morphogenesis" evidence=ISO]
[GO:0060364 "frontal suture morphogenesis" evidence=IEA;ISO]
[GO:0060444 "branching involved in mammary gland duct morphogenesis"
evidence=IEA;ISO] [GO:0061180 "mammary gland epithelium development"
evidence=ISO] [GO:0061312 "BMP signaling pathway involved in heart
development" evidence=IEA;ISO] [GO:0070166 "enamel mineralization"
evidence=IEA;ISO] [GO:0071363 "cellular response to growth factor
stimulus" evidence=IEA;ISO] [GO:0071392 "cellular response to
estradiol stimulus" evidence=IEA;ISO] [GO:2000678 "negative
regulation of transcription regulatory region DNA binding"
evidence=IEA;ISO] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:3116 GO:GO:0005737
GO:GO:0045892 GO:GO:0043066 GO:GO:0008285 GO:GO:0071363 GO:GO:0009952
GO:GO:0048863 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000978 GO:GO:0000122
GO:GO:0043065 GO:GO:0000982 GO:GO:0002076 GO:GO:0030513 GO:GO:0035313
GO:GO:0051216 GO:GO:0045669 GO:GO:0045599 GO:GO:0035116 GO:GO:0042640
GO:GO:0035115 GO:GO:0070166 GO:GO:0071392 GO:GO:0000989 GO:GO:0023019
GO:GO:0060444 GO:GO:0002063 GO:GO:0060346 GO:GO:0032792 GO:GO:0003416
GO:GO:0003148 GO:GO:0003198 GO:GO:2000678 GO:GO:0060364
eggNOG:NOG298790 HOGENOM:HOG000231922 OrthoDB:EOG4HQDK0 GO:GO:0045617
GO:GO:0061312 GO:GO:0035880 GO:GO:0051795 EMBL:U12514 IPI:IPI00231048
UniGene:Rn.10414 ProteinModelPortal:P52953 SMR:P52953 STRING:P52953
HOVERGEN:HBG066288 InParanoid:P52953 Genevestigator:P52953
GermOnline:ENSRNOG00000018355 Uniprot:P52953
Length = 139
Score = 99 (39.9 bits), Expect = 0.00029, P = 0.00029
Identities = 33/102 (32%), Positives = 48/102 (47%)
Query: 90 SGRK-KLRLTIEQSRLLEDSF--KLHTTLNSKQALAEQLNLEPRQVEVWFQNRRARTKLK 146
+ RK + T Q LE F K + ++ + + LNL QV++WFQNRRA+ K
Sbjct: 13 TNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRL 72
Query: 147 QNEVDCEFLKKCCESLTDENKRLKKELQE-LQSAKA-GASSP 186
Q E + E LK + + L + LQ+A AS P
Sbjct: 73 Q-EAELEKLKMAAKPMLPSGFSLPFPINSPLQAASIYSASYP 113
>UNIPROTKB|P52953 [details] [associations]
symbol:Msx2 "Homeobox protein MSX-2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0000989
"transcription factor binding transcription factor activity"
evidence=IEA] [GO:0002063 "chondrocyte development" evidence=IEA]
[GO:0003148 "outflow tract septum morphogenesis" evidence=IEA]
[GO:0003198 "epithelial to mesenchymal transition involved in
endocardial cushion formation" evidence=IEA] [GO:0003416
"endochondral bone growth" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0023019 "signal transduction
involved in regulation of gene expression" evidence=IEA]
[GO:0030513 "positive regulation of BMP signaling pathway"
evidence=IEA] [GO:0032792 "negative regulation of CREB
transcription factor activity" evidence=IEA] [GO:0035115 "embryonic
forelimb morphogenesis" evidence=IEA] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA] [GO:0035313 "wound healing,
spreading of epidermal cells" evidence=IEA] [GO:0035880 "embryonic
nail plate morphogenesis" evidence=IEA] [GO:0042640 "anagen"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0045599 "negative regulation of fat cell
differentiation" evidence=IEA] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=IEA] [GO:0045669 "positive
regulation of osteoblast differentiation" evidence=IEA] [GO:0048863
"stem cell differentiation" evidence=IEA] [GO:0051795 "positive
regulation of catagen" evidence=IEA] [GO:0060346 "bone trabecula
formation" evidence=IEA] [GO:0060364 "frontal suture morphogenesis"
evidence=IEA] [GO:0060444 "branching involved in mammary gland duct
morphogenesis" evidence=IEA] [GO:0061312 "BMP signaling pathway
involved in heart development" evidence=IEA] [GO:0070166 "enamel
mineralization" evidence=IEA] [GO:0071363 "cellular response to
growth factor stimulus" evidence=IEA] [GO:0071392 "cellular
response to estradiol stimulus" evidence=IEA] [GO:2000678 "negative
regulation of transcription regulatory region DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:3116
GO:GO:0005737 GO:GO:0045892 GO:GO:0043066 GO:GO:0008285
GO:GO:0071363 GO:GO:0009952 GO:GO:0048863 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0000978 GO:GO:0000122 GO:GO:0043065 GO:GO:0000982
GO:GO:0002076 GO:GO:0030513 GO:GO:0035313 GO:GO:0051216
GO:GO:0045669 GO:GO:0045599 GO:GO:0035116 GO:GO:0042640
GO:GO:0035115 GO:GO:0070166 GO:GO:0071392 GO:GO:0000989
GO:GO:0023019 GO:GO:0060444 GO:GO:0002063 GO:GO:0060346
GO:GO:0032792 GO:GO:0003416 GO:GO:0003148 GO:GO:0003198
GO:GO:2000678 GO:GO:0060364 eggNOG:NOG298790 HOGENOM:HOG000231922
OrthoDB:EOG4HQDK0 GO:GO:0045617 GO:GO:0061312 GO:GO:0035880
GO:GO:0051795 EMBL:U12514 IPI:IPI00231048 UniGene:Rn.10414
ProteinModelPortal:P52953 SMR:P52953 STRING:P52953
HOVERGEN:HBG066288 InParanoid:P52953 Genevestigator:P52953
GermOnline:ENSRNOG00000018355 Uniprot:P52953
Length = 139
Score = 99 (39.9 bits), Expect = 0.00029, P = 0.00029
Identities = 33/102 (32%), Positives = 48/102 (47%)
Query: 90 SGRK-KLRLTIEQSRLLEDSF--KLHTTLNSKQALAEQLNLEPRQVEVWFQNRRARTKLK 146
+ RK + T Q LE F K + ++ + + LNL QV++WFQNRRA+ K
Sbjct: 13 TNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRL 72
Query: 147 QNEVDCEFLKKCCESLTDENKRLKKELQE-LQSAKA-GASSP 186
Q E + E LK + + L + LQ+A AS P
Sbjct: 73 Q-EAELEKLKMAAKPMLPSGFSLPFPINSPLQAASIYSASYP 113
>ZFIN|ZDB-GENE-000822-3 [details] [associations]
symbol:hoxc11b "homeo box C11b" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000822-3 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 InterPro:IPR021918 Pfam:PF12045
GeneTree:ENSGT00700000104263 EMBL:CABZ01085068 IPI:IPI00611149
RefSeq:XP_699549.1 UniGene:Dr.75785 UniGene:Dr.91190
Ensembl:ENSDART00000111698 GeneID:570925 KEGG:dre:570925 CTD:570925
NextBio:20890353 Bgee:F1RAP5 Uniprot:F1RAP5
Length = 306
Score = 113 (44.8 bits), Expect = 0.00030, P = 0.00030
Identities = 38/125 (30%), Positives = 62/125 (49%)
Query: 23 GRHERPKDNNNKRSAARAFLDLSFTL-CPKDEDTGRMDHNLSIGSGSKMSQDDGKAGVGN 81
G +P+ + S R+ D L C K+ +G + + SG+K +D + G+
Sbjct: 176 GSSGKPESASQVSSVLRSTADGEKELECEKNTTSGSFETS----SGTK---NDNQTKSGH 228
Query: 82 SNSKRINISGRKKLRLTIEQSRLLEDSFKLHTTLNSKQAL--AEQLNLEPRQVEVWFQNR 139
S + R+ +K+ T Q R LE F + +N ++ L + LNL RQV++WFQNR
Sbjct: 229 STTPRMR---KKRCPYTKFQIRELEREFFFNVYINKEKRLQLSRILNLTDRQVKIWFQNR 285
Query: 140 RARTK 144
R + K
Sbjct: 286 RMKEK 290
>FB|FBgn0034520 [details] [associations]
symbol:lms "lateral muscles scarcer" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0060361 "flight" evidence=IMP]
[GO:0007526 "larval somatic muscle development" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:AE013599 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0007526 GeneTree:ENSGT00700000104206 GO:GO:0060361
RefSeq:NP_611491.1 UniGene:Dm.36477 ProteinModelPortal:A1ZBV6
SMR:A1ZBV6 PRIDE:A1ZBV6 EnsemblMetazoa:FBtr0086218 GeneID:37322
KEGG:dme:Dmel_CG13424 UCSC:CG13424-RA CTD:37322 FlyBase:FBgn0034520
eggNOG:NOG290719 InParanoid:A1ZBV6 OMA:PIQSIML OrthoDB:EOG4BVQ95
PhylomeDB:A1ZBV6 GenomeRNAi:37322 NextBio:803112 Bgee:A1ZBV6
Uniprot:A1ZBV6
Length = 411
Score = 115 (45.5 bits), Expect = 0.00030, P = 0.00030
Identities = 33/101 (32%), Positives = 52/101 (51%)
Query: 58 MDHNLSIG-SGSKMSQDDGKAGVGNSNSKRINISGRKKLRLTIEQSRLLEDSFKL--HTT 114
+D N+ G S ++ DDG G+G+ KR + + Q + LE F+ + +
Sbjct: 93 LDDNMDDGKSDIDLASDDGN-GLGDDRKKR------PRTAFSAAQIKALETEFERGKYLS 145
Query: 115 LNSKQALAEQLNLEPRQVEVWFQNRRARTKLKQNEVDCEFL 155
+ + ALA+QL L Q+++WFQNRR + K K D E L
Sbjct: 146 VAKRTALAKQLQLTETQIKIWFQNRRTKWKRKYTS-DVETL 185
>FB|FBgn0038833 [details] [associations]
symbol:CG15696 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 EMBL:AE014297 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00680000099870 HSSP:P13297 FlyBase:FBgn0038833
EMBL:BT029150 RefSeq:NP_650921.1 UniGene:Dm.27353 SMR:Q9VDH9
EnsemblMetazoa:FBtr0083968 GeneID:42469 KEGG:dme:Dmel_CG15696
UCSC:CG15696-RA InParanoid:Q9VDH9 OMA:YVGTNAS GenomeRNAi:42469
NextBio:828951 Uniprot:Q9VDH9
Length = 179
Score = 107 (42.7 bits), Expect = 0.00030, P = 0.00030
Identities = 30/89 (33%), Positives = 51/89 (57%)
Query: 81 NSNSKRINISGR-KKLRLTIEQSRLLEDSFKLHTTLNSKQA--LAEQLNLEPRQVEVWFQ 137
N+ +KR GR ++ T +Q + LE+++K L+++ A LA+ L L +V++WFQ
Sbjct: 86 NAPAKRT--PGRLPRIPFTPQQLQALENAYKESNYLSAEDANKLADSLELTNTRVKIWFQ 143
Query: 138 NRRARTKLKQNEVDCEFLKKCCESLTDEN 166
NRRAR + ++ E D + C+S N
Sbjct: 144 NRRARERREKREKD-----ESCDSTFSSN 167
>UNIPROTKB|F1NE15 [details] [associations]
symbol:LOC100858551 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009954 "proximal/distal pattern
formation" evidence=IEA] [GO:0030879 "mammary gland development"
evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] [GO:0060216 "definitive hemopoiesis" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005737 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GeneTree:ENSGT00700000104054 EMBL:AADN02000988 IPI:IPI00821899
Ensembl:ENSGALT00000018034 Uniprot:F1NE15
Length = 60
Score = 93 (37.8 bits), Expect = 0.00034, P = 0.00034
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 92 RKKLRLTIEQSRLLEDSF--KLHTTLNSKQALAEQLNLEPRQVEVWFQNRRARTK 144
+K+ T Q+ LE F ++ T + + +A LNL RQV++WFQNRR + K
Sbjct: 3 KKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMK 57
>UNIPROTKB|D6RAR5 [details] [associations]
symbol:D6RAR5 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC004080
HOGENOM:HOG000294138 IPI:IPI00382764 ProteinModelPortal:D6RAR5
SMR:D6RAR5 Ensembl:ENST00000470747 Uniprot:D6RAR5
Length = 112
Score = 93 (37.8 bits), Expect = 0.00034, P = 0.00034
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 92 RKKLRLTIEQSRLLEDSF--KLHTTLNSKQALAEQLNLEPRQVEVWFQNRRARTK 144
+K+ T Q+ LE F ++ T + + +A LNL RQV++WFQNRR + K
Sbjct: 48 KKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMK 102
>RGD|1564874 [details] [associations]
symbol:Nkx1-1 "NK1 transcription factor related, locus 1
(Drosophila)" species:10116 "Rattus norvegicus" [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043467 "regulation of generation of precursor
metabolites and energy" evidence=IEA;ISO] [GO:0050877 "neurological
system process" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1564874 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0050877 GeneTree:ENSGT00660000095141
GO:GO:0043467 IPI:IPI00766731 ProteinModelPortal:F1M5E3 SMR:F1M5E3
Ensembl:ENSRNOT00000057911 Uniprot:F1M5E3
Length = 60
Score = 93 (37.8 bits), Expect = 0.00034, P = 0.00034
Identities = 25/59 (42%), Positives = 33/59 (55%)
Query: 92 RKKLRLTIEQSRLLEDSFKLHTTLN--SKQALAEQLNLEPRQVEVWFQNRRARTKLKQN 148
R + T EQ LE+ FK L+ + LA L+L QV++WFQNRR + K KQN
Sbjct: 3 RARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWK-KQN 60
>UNIPROTKB|P31277 [details] [associations]
symbol:HOXD11 "Homeobox protein Hox-D11" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001656 "metanephros development" evidence=IEA] [GO:0001759
"organ induction" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009954 "proximal/distal
pattern formation" evidence=IEA] [GO:0010720 "positive regulation
of cell development" evidence=IEA] [GO:0032332 "positive regulation
of chondrocyte differentiation" evidence=IEA] [GO:0042733
"embryonic digit morphogenesis" evidence=IEA] [GO:0048589
"developmental growth" evidence=IEA] [GO:0060272 "embryonic
skeletal joint morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0001658 "branching involved in
ureteric bud morphogenesis" evidence=ISS] [GO:0009953
"dorsal/ventral pattern formation" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0032332
GO:GO:0048589 GO:GO:0009953 GO:GO:0009954 GO:GO:0042733
GO:GO:0001658 GO:GO:0001656 GO:GO:0001759 GO:GO:0060351
EMBL:AC009336 HOGENOM:HOG000231898 HOVERGEN:HBG052048 KO:K09296
GO:GO:0010720 InterPro:IPR021918 Pfam:PF12045 OrthoDB:EOG4KKZ3X
CTD:3237 EMBL:AF154915 IPI:IPI00305856 PIR:S14938
RefSeq:NP_067015.2 UniGene:Hs.421136 ProteinModelPortal:P31277
SMR:P31277 STRING:P31277 DMDM:223590220 PRIDE:P31277 DNASU:3237
Ensembl:ENST00000249504 GeneID:3237 KEGG:hsa:3237 UCSC:uc002uki.3
GeneCards:GC02P176936 HGNC:HGNC:5134 MIM:142986 neXtProt:NX_P31277
PharmGKB:PA29408 eggNOG:NOG305087 OMA:SPCTKAT GenomeRNAi:3237
NextBio:12883 ArrayExpress:P31277 Bgee:P31277 CleanEx:HS_HOXD11
Genevestigator:P31277 GermOnline:ENSG00000128713 Uniprot:P31277
Length = 338
Score = 113 (44.8 bits), Expect = 0.00036, P = 0.00036
Identities = 32/83 (38%), Positives = 42/83 (50%)
Query: 65 GSGSKMSQDDGKAGVGNSNSKRINISGRKK-LRLTIEQSRLLEDSFKLHTTLNSKQAL-- 121
GSG G+AG S+S RKK T Q R LE F + +N ++ L
Sbjct: 240 GSGGDGEGPPGEAGAEKSSSAVAPQRSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQL 299
Query: 122 AEQLNLEPRQVEVWFQNRRARTK 144
+ LNL RQV++WFQNRR + K
Sbjct: 300 SRMLNLTDRQVKIWFQNRRMKEK 322
>TAIR|locus:2167230 [details] [associations]
symbol:HDG9 "AT5G17320" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 EMBL:AB005238 ProtClustDB:CLSN2679643
IPI:IPI00529269 RefSeq:NP_197234.1 UniGene:At.54882
ProteinModelPortal:Q9FFI0 SMR:Q9FFI0 EnsemblPlants:AT5G17320.1
GeneID:831598 KEGG:ath:AT5G17320 TAIR:At5g17320 eggNOG:KOG0493
InParanoid:Q9FFI0 PhylomeDB:Q9FFI0 Genevestigator:Q9FFI0
Uniprot:Q9FFI0
Length = 718
Score = 117 (46.2 bits), Expect = 0.00039, P = 0.00039
Identities = 34/118 (28%), Positives = 54/118 (45%)
Query: 71 SQDDGKAGVGNSNSKRINISGRKKLRLTIEQSRLLEDSFKL--HTTLNSKQALAEQLNLE 128
S D+ + V + + R G R T EQ LE FK H ++ L E+LNL+
Sbjct: 9 SSDERENDVDANTNNRHEKKGYH--RHTNEQIHRLETYFKECPHPDEFQRRLLGEELNLK 66
Query: 129 PRQVEVWFQNRRARTKLKQNEVDCEFLKKCCESLTDENKRLKKELQELQSAKAGASSP 186
P+Q++ WFQN+R + K + D L+ + EN+ ++ L + G P
Sbjct: 67 PKQIKFWFQNKRTQAKSHNEKADNAALRAENIKIRRENESMEDALNNVVCPPCGGRGP 124
>ZFIN|ZDB-GENE-041210-244 [details] [associations]
symbol:pax4 "paired box 4" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR001356
InterPro:IPR001523 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00027
PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057 SMART:SM00351
SMART:SM00389 ZFIN:ZDB-GENE-041210-244 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 CTD:5078
EMBL:FR727738 RefSeq:NP_001232009.2 UniGene:Dr.155413 GeneID:561564
KEGG:dre:561564 NextBio:20883985 Uniprot:G2ZGB0
Length = 360
Score = 113 (44.8 bits), Expect = 0.00040, P = 0.00040
Identities = 36/119 (30%), Positives = 58/119 (48%)
Query: 81 NSNSKRINISGRKKLRLTIEQSRLLEDSFK--LHTTLNSKQALAEQLNLEPRQVEVWFQN 138
N+N +R + R + T +QS LE F L+ L +++ LAE+ NL ++VWF N
Sbjct: 171 NTNLRRT--AHRSRTAFTADQSGRLEKEFTCGLYPDLLTREKLAEETNLSQDTIKVWFSN 228
Query: 139 RRARTKLKQN--EVDCE-----FLKKCCESLTDENKRLKKELQELQSAKAGASSPLFIQ 190
RRAR + ++ DC FL C +L + L + ++ A ++ PL Q
Sbjct: 229 RRARMRRERKFEHNDCGIARRGFLGNCRNALISLSSTAGCSLDDYRAHHAPSAFPLAAQ 287
>ZFIN|ZDB-GENE-990415-130 [details] [associations]
symbol:hesx1 "homeo box (expressed in ES cells) 1"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0030900 "forebrain development" evidence=IGI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-130 GO:GO:0005634 GO:GO:0043565 GO:GO:0030900
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 CTD:8820
HOVERGEN:HBG004226 KO:K09354 HSSP:P06601 eggNOG:KOG0490 EMBL:U65433
IPI:IPI00501189 RefSeq:NP_571424.1 UniGene:Dr.160293 UniGene:Dr.226
ProteinModelPortal:P79738 GeneID:30620 KEGG:dre:30620
InParanoid:P79738 NextBio:20806982 Uniprot:P79738
Length = 161
Score = 104 (41.7 bits), Expect = 0.00041, P = 0.00040
Identities = 27/90 (30%), Positives = 55/90 (61%)
Query: 73 DDGKA---GVGNSNSKRIN--ISGRKKLRLTIEQSRLLEDSFKLHTT--LNSKQALAEQL 125
+DGK+ +S + +N I R + + Q ++LE F++++ ++ ++ LA++L
Sbjct: 58 EDGKSFSKSPTDSYRRTLNWYIGRRPRTAFSSVQIKILESVFQVNSYPGIDIREELAKKL 117
Query: 126 NLEPRQVEVWFQNRRARTKLKQNEVDCEFL 155
L+ ++++WFQNRRA KLK++ + +FL
Sbjct: 118 QLDEDRIQIWFQNRRA--KLKRSHRESQFL 145
>UNIPROTKB|F6Q274 [details] [associations]
symbol:F6Q274 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00700000104206
OrthoDB:EOG4TTGJP EMBL:CU498958 Ensembl:ENSSSCT00000011554
OMA:CGSEDED Uniprot:F6Q274
Length = 280
Score = 111 (44.1 bits), Expect = 0.00042, P = 0.00042
Identities = 38/125 (30%), Positives = 56/125 (44%)
Query: 37 AARAFLDLSFTLCPKDEDTGRMDHNLSIGSGSKMSQDDGKAGVGNSNSKRINISGRKKLR 96
A RA L + LC +E + L + S + +G+ G+ ++ RK
Sbjct: 74 AGRALLSQTSPLCALEELASKTFKGLEV---SVLQAAEGRDGMTIFGQRQTPKKRRKSRT 130
Query: 97 LTIEQSRLLEDSFKLHTTLN--SKQALAEQLNLEPRQVEVWFQNRRARTK--LKQNEVDC 152
T Q LE F L+ + +A+QL L QV WFQNRRA+ K L++ + D
Sbjct: 131 FTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADV 190
Query: 153 EFLKK 157
E KK
Sbjct: 191 ESPKK 195
>UNIPROTKB|P52954 [details] [associations]
symbol:LBX1 "Transcription factor LBX1" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007517 "muscle
organ development" evidence=IEA] [GO:0001947 "heart looping"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0021920
"regulation of transcription from RNA polymerase II promoter
involved in spinal cord association neuron specification"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0048664 "neuron fate
determination" evidence=IEA] [GO:0009653 "anatomical structure
morphogenesis" evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0008285
EMBL:CH471066 GO:GO:0045665 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0007517
GO:GO:0001947 GO:GO:0009653 GO:GO:0000976 eggNOG:NOG240187
GO:GO:0048664 EMBL:X90828 EMBL:AL135794 EMBL:BC069156 EMBL:BC136321
IPI:IPI00006058 RefSeq:NP_006553.2 UniGene:Hs.37128
ProteinModelPortal:P52954 SMR:P52954 STRING:P52954 DMDM:117949813
PRIDE:P52954 Ensembl:ENST00000370193 GeneID:10660 KEGG:hsa:10660
UCSC:uc001ksx.3 CTD:10660 GeneCards:GC10M102976 HGNC:HGNC:16960
HPA:HPA002086 MIM:604255 neXtProt:NX_P52954 PharmGKB:PA142671561
HOGENOM:HOG000007247 HOVERGEN:HBG006244 InParanoid:P52954 KO:K09353
OMA:NSEATAG OrthoDB:EOG4TTGJP GenomeRNAi:10660 NextBio:40539
ArrayExpress:P52954 Bgee:P52954 CleanEx:HS_LBX1
Genevestigator:P52954 GermOnline:ENSG00000138136 GO:GO:0021920
Uniprot:P52954
Length = 281
Score = 111 (44.1 bits), Expect = 0.00043, P = 0.00043
Identities = 45/151 (29%), Positives = 67/151 (44%)
Query: 37 AARAFLDLSFTLCPKDEDTGRMDHNLSIGSGSKMSQDDGKAGVGNSNSKRINISGRK-KL 95
A RA L + LC +E + L + S + +G+ G+ ++ RK +
Sbjct: 74 AGRALLSQTSPLCALEELASKTFKGLEV---SVLQAAEGRDGMTIFGQRQTPKKRRKSRT 130
Query: 96 RLTIEQSRLLEDSFKLHTTLN--SKQALAEQLNLEPRQVEVWFQNRRARTK--LKQNEVD 151
T Q LE F L+ + +A+QL L QV WFQNRRA+ K L++ + D
Sbjct: 131 AFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKAD 190
Query: 152 CEFLKKCCESLTDENKRLKKELQELQSAKAG 182
E KK S + L EL++ A AG
Sbjct: 191 VESAKKLGPSGQMDIVALA-ELEQNSEATAG 220
>UNIPROTKB|F1MCF6 [details] [associations]
symbol:CDX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060349 "bone
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 GO:GO:0060349
EMBL:DAAA02020624 IPI:IPI00867478 Ensembl:ENSBTAT00000015934
OMA:MTIKEEY Uniprot:F1MCF6
Length = 118
Score = 92 (37.4 bits), Expect = 0.00044, P = 0.00044
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 92 RKKLRLTI-EQSRL-LEDSFKL--HTTLNSKQALAEQLNLEPRQVEVWFQNRRARTKLKQ 147
+ K R+ + RL LE F + T+ K LA L L RQV++WFQNRRA+ + K
Sbjct: 7 KDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKER-KV 65
Query: 148 NE 149
N+
Sbjct: 66 NK 67
>UNIPROTKB|F1SHT6 [details] [associations]
symbol:F1SHT6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:CU480612
ProteinModelPortal:F1SHT6 SMR:F1SHT6 Ensembl:ENSSSCT00000018180
OMA:RRYEISQ Uniprot:F1SHT6
Length = 93
Score = 92 (37.4 bits), Expect = 0.00044, P = 0.00044
Identities = 24/62 (38%), Positives = 35/62 (56%)
Query: 90 SGRKK-LRLTIEQSRLLEDSF--KLHTTLNSKQALAEQLNLEPRQVEVWFQNRRARTKLK 146
SGRKK T Q+ LE F ++ T + ++ ++L RQV++WFQNRR + K K
Sbjct: 18 SGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLK-K 76
Query: 147 QN 148
N
Sbjct: 77 MN 78
>UNIPROTKB|G3ECA1 [details] [associations]
symbol:HoxA10 "Homebox A10" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09295
GeneTree:ENSGT00700000104054 EMBL:CU570959 EMBL:HQ700342
RefSeq:NP_001231267.1 UniGene:Ssc.100927 UniGene:Ssc.26254
SMR:G3ECA1 Ensembl:ENSSSCT00000028043 GeneID:100620451
KEGG:ssc:100620451 OMA:GNTKGEN Uniprot:G3ECA1
Length = 94
Score = 92 (37.4 bits), Expect = 0.00044, P = 0.00044
Identities = 24/62 (38%), Positives = 35/62 (56%)
Query: 90 SGRKK-LRLTIEQSRLLEDSF--KLHTTLNSKQALAEQLNLEPRQVEVWFQNRRARTKLK 146
SGRKK T Q+ LE F ++ T + ++ ++L RQV++WFQNRR + K K
Sbjct: 19 SGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLK-K 77
Query: 147 QN 148
N
Sbjct: 78 MN 79
>RGD|621233 [details] [associations]
symbol:Cdx1 "caudal type homeo box 1" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;TAS] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007389
"pattern specification process" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0060349 "bone
morphogenesis" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:621233 GO:GO:0005634 GO:GO:0009952 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0060349 eggNOG:NOG291290
HOGENOM:HOG000115975 HOVERGEN:HBG005302 OrthoDB:EOG42FSK7
EMBL:M91450 IPI:IPI00766495 PIR:S27397 ProteinModelPortal:Q05095
SMR:Q05095 STRING:Q05095 UCSC:RGD:621233 InParanoid:Q05095
ArrayExpress:Q05095 Genevestigator:Q05095
GermOnline:ENSRNOG00000018624 Uniprot:Q05095
Length = 123
Score = 92 (37.4 bits), Expect = 0.00044, P = 0.00044
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 92 RKKLRLTI-EQSRL-LEDSFKL--HTTLNSKQALAEQLNLEPRQVEVWFQNRRARTKLKQ 147
+ K R+ + RL LE F + T+ K LA L L RQV++WFQNRRA+ + K
Sbjct: 5 KDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKER-KV 63
Query: 148 NE 149
N+
Sbjct: 64 NK 65
>UNIPROTKB|Q05095 [details] [associations]
symbol:Cdx1 "Homeobox protein CDX-1" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:621233
GO:GO:0005634 GO:GO:0009952 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0060349 eggNOG:NOG291290 HOGENOM:HOG000115975
HOVERGEN:HBG005302 OrthoDB:EOG42FSK7 EMBL:M91450 IPI:IPI00766495
PIR:S27397 ProteinModelPortal:Q05095 SMR:Q05095 STRING:Q05095
UCSC:RGD:621233 InParanoid:Q05095 ArrayExpress:Q05095
Genevestigator:Q05095 GermOnline:ENSRNOG00000018624 Uniprot:Q05095
Length = 123
Score = 92 (37.4 bits), Expect = 0.00044, P = 0.00044
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 92 RKKLRLTI-EQSRL-LEDSFKL--HTTLNSKQALAEQLNLEPRQVEVWFQNRRARTKLKQ 147
+ K R+ + RL LE F + T+ K LA L L RQV++WFQNRRA+ + K
Sbjct: 5 KDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKER-KV 63
Query: 148 NE 149
N+
Sbjct: 64 NK 65
>UNIPROTKB|J9P485 [details] [associations]
symbol:EMX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 EMBL:AAEX03015567 EMBL:AAEX03015568
EMBL:AAEX03015569 Ensembl:ENSCAFT00000043720 Uniprot:J9P485
Length = 134
Score = 96 (38.9 bits), Expect = 0.00047, P = 0.00047
Identities = 28/72 (38%), Positives = 41/72 (56%)
Query: 93 KKLRLTIEQSRLL--EDSF-KLHTTLNS-KQALAEQLNLEPRQVEVWFQNRRA---RTKL 145
K++R S+LL E +F K H + + ++ LA L+L QV+VWFQNRR R KL
Sbjct: 37 KRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQKL 96
Query: 146 KQNEVDCEFLKK 157
++ D + KK
Sbjct: 97 EEEGSDSQQKKK 108
>UNIPROTKB|F1NM26 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001757 "somite
specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00660000095141 OMA:DHTLFGC
EMBL:AADN02000860 EMBL:AADN02000861 EMBL:AADN02000862
EMBL:AADN02000863 EMBL:AADN02000864 IPI:IPI00604288
Ensembl:ENSGALT00000017555 ArrayExpress:F1NM26 Uniprot:F1NM26
Length = 302
Score = 111 (44.1 bits), Expect = 0.00050, P = 0.00050
Identities = 33/82 (40%), Positives = 43/82 (52%)
Query: 66 SGSKMSQDDGKAGVGNSNSKRINISGRK-KLRLTIEQSRLLEDSFKLHTTLNS--KQALA 122
SG + S D + GN S+ +N RK + T EQ R LE F H L + +A
Sbjct: 162 SGKRKS-DSSDSQEGNYKSE-VNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIA 219
Query: 123 EQLNLEPRQVEVWFQNRRARTK 144
L+L RQV+VWFQNRR + K
Sbjct: 220 VNLDLTERQVKVWFQNRRMKWK 241
>WB|WBGene00000446 [details] [associations]
symbol:ceh-23 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 EMBL:FO080278
eggNOG:NOG257690 GeneTree:ENSGT00680000099625 EMBL:L19249
PIR:S44907 RefSeq:NP_498700.1 ProteinModelPortal:P34663 SMR:P34663
STRING:P34663 EnsemblMetazoa:ZK652.5 GeneID:176096
KEGG:cel:CELE_ZK652.5 UCSC:ZK652.5 CTD:176096 WormBase:ZK652.5
HOGENOM:HOG000076961 InParanoid:P34663 OMA:KARTIYG NextBio:891100
Uniprot:P34663
Length = 305
Score = 111 (44.1 bits), Expect = 0.00051, P = 0.00051
Identities = 28/74 (37%), Positives = 43/74 (58%)
Query: 81 NSNSKRINISGRKKLRLTI---EQSRLLEDSFK--LHTTLNSKQALAEQLNLEPRQVEVW 135
NS + + +K R TI Q++ LED FK ++ ++ LA++L L P QV +W
Sbjct: 200 NSMAHSRRAANHRKAR-TIYGTTQTQQLEDMFKGQMYVVGAERENLAQRLGLSPSQVRIW 258
Query: 136 FQNRRARTKLKQNE 149
FQNRR++ + KQ E
Sbjct: 259 FQNRRSKHRRKQQE 272
>UNIPROTKB|P24342 [details] [associations]
symbol:HOXD11 "Homeobox protein Hox-D11" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOVERGEN:HBG052048 KO:K09296
InterPro:IPR021918 Pfam:PF12045 EMBL:M81249 EMBL:D10288
IPI:IPI00583692 PIR:B37914 RefSeq:NP_989951.1 UniGene:Gga.958
ProteinModelPortal:P24342 SMR:P24342 STRING:P24342 GeneID:395328
KEGG:gga:395328 CTD:3237 eggNOG:NOG244779 NextBio:20815413
Uniprot:P24342
Length = 280
Score = 110 (43.8 bits), Expect = 0.00055, P = 0.00055
Identities = 30/84 (35%), Positives = 43/84 (51%)
Query: 64 IGSGSKMSQDDGKAGVGNSNSKRINISGRKK-LRLTIEQSRLLEDSFKLHTTLNSKQAL- 121
+ + S + G+A SNS + RKK T Q R LE F + +N ++ L
Sbjct: 181 VTTASGAASPPGEAVAEKSNSSAVPQRSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQ 240
Query: 122 -AEQLNLEPRQVEVWFQNRRARTK 144
+ LNL RQV++WFQNRR + K
Sbjct: 241 LSRMLNLTDRQVKIWFQNRRMKEK 264
>UNIPROTKB|F1P4T4 [details] [associations]
symbol:HOXD13 "Homeobox protein Hox-D13" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00670000097683
IPI:IPI00598090 EMBL:AADN02020034 Ensembl:ENSGALT00000015092
OMA:CANDQTQ Uniprot:F1P4T4
Length = 111
Score = 91 (37.1 bits), Expect = 0.00057, P = 0.00057
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 91 GRKK-LRLTIEQSRLLEDSFKLHTTLNS--KQALAEQLNLEPRQVEVWFQNRRARTK 144
GRKK + T Q + LE+ + ++ +N ++ ++ NL RQV +WFQNRR + K
Sbjct: 44 GRKKRVPYTKLQLKELENEYAINKFINKDKRRRISAATNLSERQVTIWFQNRRVKDK 100
>RGD|1583128 [details] [associations]
symbol:LOC686376 "similar to oocyte specific homeobox 6"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1583128 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 IPI:IPI00766785
Ensembl:ENSRNOT00000039801 Uniprot:F1LU16
Length = 255
Score = 109 (43.4 bits), Expect = 0.00059, P = 0.00059
Identities = 26/95 (27%), Positives = 49/95 (51%)
Query: 61 NLSIGSG--SKMSQDDGKAGVGNSNSKRINISGRKKLRLTI--EQSRLLEDSFK--LHTT 114
+ S+ SG S + G G+ + ++ +K+R+T +Q R+L+D F + T
Sbjct: 29 SFSVNSGLQSTLRPMMGSGEHGDQRTSKVTSRTERKVRITYTEKQKRMLQDHFNNCRYPT 88
Query: 115 LNSKQALAEQLNLEPRQVEVWFQNRRARTKLKQNE 149
+ ALA ++ + ++VWF+N RA+ K K +
Sbjct: 89 QKDRMALASRVGVTHNDIQVWFKNNRAKDKRKNRQ 123
>MGI|MGI:96189 [details] [associations]
symbol:Hoxb8 "homeobox B8" species:10090 "Mus musculus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007625 "grooming behavior" evidence=IMP]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI;IMP]
[GO:0019233 "sensory perception of pain" evidence=IMP] [GO:0021516
"dorsal spinal cord development" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045638 "negative
regulation of myeloid cell differentiation" evidence=IDA]
[GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI;IMP] [GO:0048705 "skeletal system morphogenesis"
evidence=IGI;IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96189 GO:GO:0005634
GO:GO:0009952 GO:GO:0019233 GO:GO:0008344 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0048704 GO:GO:0000976
GO:GO:0007625 GO:GO:0045638 GO:GO:0021516 HOVERGEN:HBG016849
GeneTree:ENSGT00700000104332 eggNOG:NOG314669 OrthoDB:EOG4H464V
CTD:3218 KO:K09308 OMA:MERAQEV EMBL:X13961 EMBL:X13721 EMBL:M18399
EMBL:X54077 IPI:IPI00108997 PIR:S03712 RefSeq:NP_034591.1
UniGene:Mm.4822 ProteinModelPortal:P09632 SMR:P09632 DIP:DIP-35618N
IntAct:P09632 STRING:P09632 PhosphoSite:P09632 PRIDE:P09632
Ensembl:ENSMUST00000052650 Ensembl:ENSMUST00000168043 GeneID:15416
KEGG:mmu:15416 InParanoid:P09632 NextBio:288150 Bgee:P09632
CleanEx:MM_HOXB8 Genevestigator:P09632
GermOnline:ENSMUSG00000056648 Uniprot:P09632
Length = 243
Score = 108 (43.1 bits), Expect = 0.00069, P = 0.00069
Identities = 34/99 (34%), Positives = 52/99 (52%)
Query: 90 SGRKKLRLTIE--QSRLLEDSFKLHTTLNSKQAL--AEQLNLEPRQVEVWFQNRRARTKL 145
+GR++ R T Q+ LE F + L K+ + + L L RQV++WFQNRR + K
Sbjct: 144 AGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK- 202
Query: 146 KQNEVDCEFLKKCCESLTDENKRLKK--ELQELQSAKAG 182
K+N D +F CE E ++L++ E E A+ G
Sbjct: 203 KENNKD-KFPSSKCEQEELEKEKLERAPETAEQGDAQKG 240
>UNIPROTKB|G3V6Y1 [details] [associations]
symbol:Hoxb8 "Homeo box B8 (Mapped)" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007625
"grooming behavior" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0019233 "sensory perception of
pain" evidence=IEA] [GO:0021516 "dorsal spinal cord development"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1586211 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976 EMBL:CH473948
GeneTree:ENSGT00700000104332 CTD:3218 KO:K09308 OMA:MERAQEV
UniGene:Rn.231433 RefSeq:NP_001178578.1 ProteinModelPortal:G3V6Y1
SMR:G3V6Y1 Ensembl:ENSRNOT00000009986 GeneID:24457 KEGG:rno:24457
NextBio:603373 Uniprot:G3V6Y1
Length = 243
Score = 108 (43.1 bits), Expect = 0.00069, P = 0.00069
Identities = 34/99 (34%), Positives = 52/99 (52%)
Query: 90 SGRKKLRLTIE--QSRLLEDSFKLHTTLNSKQAL--AEQLNLEPRQVEVWFQNRRARTKL 145
+GR++ R T Q+ LE F + L K+ + + L L RQV++WFQNRR + K
Sbjct: 144 AGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK- 202
Query: 146 KQNEVDCEFLKKCCESLTDENKRLKK--ELQELQSAKAG 182
K+N D +F CE E ++L++ E E A+ G
Sbjct: 203 KENNKD-KFPSSKCEQEELEKEKLERAPETAEQGDAQKG 240
>UNIPROTKB|E1C1I8 [details] [associations]
symbol:LOC100858967 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104263 EMBL:AADN02000990 EMBL:AADN02000991
EMBL:AADN02000992 EMBL:AADN02000993 IPI:IPI00818363
Ensembl:ENSGALT00000037817 ArrayExpress:E1C1I8 Uniprot:E1C1I8
Length = 203
Score = 106 (42.4 bits), Expect = 0.00071, P = 0.00071
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 65 GSGSKMSQDDGKAGVGNSNSKRINISGRKKLRLTIEQSRLLEDSFKLHTTLNSKQAL--A 122
GS + S + + G+S+ +R +K+ T Q R LE F +N ++ L +
Sbjct: 109 GSSPESSSGNNEEKSGSSSGQRTR---KKRCPYTKYQIRELEREFFFSVYINKEKRLQLS 165
Query: 123 EQLNLEPRQVEVWFQNRRARTK 144
LNL RQV++WFQNRR + K
Sbjct: 166 RMLNLTDRQVKIWFQNRRMKEK 187
>UNIPROTKB|F6R243 [details] [associations]
symbol:CDX1 "Homeobox protein CDX-1" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0060349 "bone
morphogenesis" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 EMBL:AADN02028624 IPI:IPI00819151
ProteinModelPortal:F6R243 Ensembl:ENSGALT00000040457 Uniprot:F6R243
Length = 117
Score = 90 (36.7 bits), Expect = 0.00074, P = 0.00074
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 92 RKKLRLTI-EQSRL-LEDSFKL--HTTLNSKQALAEQLNLEPRQVEVWFQNRRARTKLKQ 147
+ K R+ + RL LE F + T+ K LA L L RQV++WFQNRRA+ + K
Sbjct: 6 KDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAAALGLTERQVKIWFQNRRAKER-KV 64
Query: 148 NE 149
N+
Sbjct: 65 NK 66
>UNIPROTKB|P24340 [details] [associations]
symbol:HOXD9 "Homeobox protein Hox-D9" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231180 eggNOG:NOG288226
OrthoDB:EOG4SXNCJ IPI:IPI00814164 PIR:S14797 UniGene:Gga.12699
ProteinModelPortal:P24340 SMR:P24340 STRING:P24340
InParanoid:P24340 Uniprot:P24340
Length = 60
Score = 90 (36.7 bits), Expect = 0.00074, P = 0.00074
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 92 RKKLRLTIEQSRLLEDSF--KLHTTLNSKQALAEQLNLEPRQVEVWFQNRRARTK 144
+K+ T Q+ LE F ++ T + + +A LNL RQV++WFQNRR + K
Sbjct: 3 KKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMK 57
>UNIPROTKB|I3LRX4 [details] [associations]
symbol:I3LRX4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00660000095141 Ensembl:ENSSSCT00000029259 OMA:PVHVNRI
Uniprot:I3LRX4
Length = 116
Score = 90 (36.7 bits), Expect = 0.00074, P = 0.00074
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 92 RKKLRLTIEQSRLLEDSF--KLHTTLNSKQALAEQLNLEPRQVEVWFQNRRARTK 144
R+ T EQ LE F K + +L + +A L L QV++WFQNRRA+ K
Sbjct: 4 RRGQHXTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 58
>ZFIN|ZDB-GENE-001206-2 [details] [associations]
symbol:lbx2 "ladybird homeobox homolog 2
(Drosophila)" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0055001
"muscle cell development" evidence=IMP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-001206-2 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0055001
HSSP:P13297 HOVERGEN:HBG006244 EMBL:AJ295165 IPI:IPI00511662
UniGene:Dr.27181 ProteinModelPortal:Q9DD91 InParanoid:Q9DD91
Uniprot:Q9DD91
Length = 257
Score = 108 (43.1 bits), Expect = 0.00079, P = 0.00079
Identities = 50/183 (27%), Positives = 84/183 (45%)
Query: 36 SAARAFLDL-SFTLCPKDEDTGRMDHNLSIGSGSKMSQDDGKAGVGNSNSKRINISGRKK 94
SA+R + S LC +E + L + S + +G+ + N+ +R R+K
Sbjct: 73 SASRNGISAPSSPLCALEELASKTFKGLEV---SVIQAAEGREHI-NAFGQRQASKKRRK 128
Query: 95 LRLTIEQSRL--LEDSFKLHTTLN--SKQALAEQLNLEPRQVEVWFQNRRARTK--LKQN 148
R ++ LE F L+ + +A+QL L QV WFQNRRA+ K L++
Sbjct: 129 SRTAFTNHQIYELEKRFWYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEM 188
Query: 149 EVDCEFLKKCCESLTDENKRLKKELQELQSAKAGASSPLFIQLQKAA--TCPSCEKIMRT 206
+ D E LKK + + + +++++ A G S P+ L A PS + +T
Sbjct: 189 KADVESLKK----IPPQALQKLVSMEDMEDAHGG-SGPISPSLSPRAFPQSPSSSR-GQT 242
Query: 207 SDE 209
+DE
Sbjct: 243 TDE 245
>TAIR|locus:2145116 [details] [associations]
symbol:HDG7 "AT5G52170" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 eggNOG:euNOG18333
HOGENOM:HOG000243256 HSSP:Q6B2C0 EMBL:AB025603 IPI:IPI00525258
RefSeq:NP_200030.1 UniGene:At.55500 ProteinModelPortal:Q9LTK3
SMR:Q9LTK3 EnsemblPlants:AT5G52170.1 GeneID:835293
KEGG:ath:AT5G52170 TAIR:At5g52170 InParanoid:Q9LTK3
PhylomeDB:Q9LTK3 Genevestigator:Q9LTK3 Uniprot:Q9LTK3
Length = 682
Score = 114 (45.2 bits), Expect = 0.00079, P = 0.00079
Identities = 46/139 (33%), Positives = 64/139 (46%)
Query: 38 ARAFLDLSFTLCPKDEDTGRMDHNLSIGSGSKMSQDDGKAGVGNSNSKRINISGRKKLRL 97
+R + SF L K +D +LS S MS D+ K KR K R
Sbjct: 10 SRGDFNPSFFL-GKLKDDEFESRSLSDDSFDAMSGDEDKQEQRPKKKKRKT----KYHRH 64
Query: 98 TIEQSRLLEDSFKLHTTLNSKQAL--AEQLNLEPRQVEVWFQNRRARTKLKQNEVDCEFL 155
T Q + LE FK N KQ L ++L LE +Q++ WFQNRR + K + + L
Sbjct: 65 TSYQIQELESFFKECPHPNEKQRLELGKKLTLESKQIKFWFQNRRTQMKTQLERHENVIL 124
Query: 156 KKCCESLTDENKRLKKELQ 174
K+ E L EN LK+ ++
Sbjct: 125 KQENEKLRLENSFLKESMR 143
>WB|WBGene00003377 [details] [associations]
symbol:mls-2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0042661 "regulation of mesodermal cell
fate specification" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IMP] [GO:0008284 "positive regulation
of cell proliferation" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0000132 GO:GO:0002119
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104206 GO:GO:0042661 HSSP:P13297
eggNOG:NOG312519 EMBL:FO080826 RefSeq:NP_508815.2
ProteinModelPortal:Q18533 SMR:Q18533 STRING:Q18533
EnsemblMetazoa:C39E6.4 GeneID:180751 KEGG:cel:CELE_C39E6.4
UCSC:C39E6.4 CTD:180751 WormBase:C39E6.4 HOGENOM:HOG000020310
InParanoid:Q18533 OMA:MTTMSSQ NextBio:910768 Uniprot:Q18533
Length = 341
Score = 110 (43.8 bits), Expect = 0.00081, P = 0.00081
Identities = 32/105 (30%), Positives = 56/105 (53%)
Query: 51 KDEDTGRMDHNLSIGSGSKMSQDDGKAGVGNSNSKRINISGRKKLRLTIEQSRL--LEDS 108
KD +T + S ++ D G+ +NS + + +KK R +S++ LE
Sbjct: 160 KDGETRDSTGGSPLESDAEDDDDIGRGSDDEANSSDPSQNRKKKTRTVFSRSQVSQLEMM 219
Query: 109 FKLHTTLNSKQA--LAEQLNLEPRQVEVWFQNRRARTKLKQNEVD 151
F+ L+S++ LA++L+L QV++WFQNRR + K +Q + D
Sbjct: 220 FECKRYLSSQERSNLAQKLHLTETQVKIWFQNRRNKFK-RQAQTD 263
>WB|WBGene00003000 [details] [associations]
symbol:lin-11 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0040026 "positive
regulation of vulval development" evidence=IMP] [GO:0001708 "cell
fate specification" evidence=IMP] [GO:0007413 "axonal
fasciculation" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] [GO:0045595 "regulation of cell differentiation"
evidence=IMP] [GO:0030334 "regulation of cell migration"
evidence=IMP] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0001708 GO:GO:0018991
GO:GO:0040010 GO:GO:0045595 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0030334 Gene3D:2.10.110.10 GO:GO:0007413 GO:GO:0040026
GeneTree:ENSGT00700000104177 eggNOG:NOG257130 HOGENOM:HOG000231630
KO:K09372 EMBL:Z80221 EMBL:X54355 PIR:T27509 RefSeq:NP_492696.1
ProteinModelPortal:P20154 SMR:P20154 STRING:P20154
EnsemblMetazoa:ZC247.3 GeneID:172893 KEGG:cel:CELE_ZC247.3
UCSC:ZC247.3 CTD:172893 WormBase:ZC247.3 InParanoid:P20154
OMA:NDQQFYP NextBio:877423 Uniprot:P20154
Length = 405
Score = 111 (44.1 bits), Expect = 0.00084, P = 0.00083
Identities = 28/90 (31%), Positives = 51/90 (56%)
Query: 63 SIGSGSKMSQDDGKAGVGNSNSKRINISGRKKLRLTIEQSRL--LEDSFKL--HTTLNSK 118
++ + ++ DDG+ G NS N + R+ R TI+ +L L+++F T + +
Sbjct: 212 NVDACDEVGLDDGEGDCGKDNSDDSNSAKRRGPRTTIKAKQLETLKNAFAATPKPTRHIR 271
Query: 119 QALAEQLNLEPRQVEVWFQNRRARTK-LKQ 147
+ LA + L R ++VWFQNRR++ + +KQ
Sbjct: 272 EQLAAETGLNMRVIQVWFQNRRSKERRMKQ 301
>TAIR|locus:2207235 [details] [associations]
symbol:HDG2 "AT1G05230" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0010090 "trichome morphogenesis" evidence=IMP]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0010090 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 eggNOG:NOG261733 ProtClustDB:CLSN2681990
EMBL:AC000098 EMBL:AY037177 EMBL:AY091690 IPI:IPI00530516
PIR:G86186 RefSeq:NP_001184911.1 RefSeq:NP_172015.1
RefSeq:NP_849596.1 UniGene:At.19179 UniGene:At.50922
ProteinModelPortal:Q94C37 SMR:Q94C37 STRING:Q94C37 PaxDb:Q94C37
PRIDE:Q94C37 EnsemblPlants:AT1G05230.1 EnsemblPlants:AT1G05230.2
EnsemblPlants:AT1G05230.4 GeneID:839256 KEGG:ath:AT1G05230
TAIR:At1g05230 InParanoid:Q94C37 OMA:VGVITNQ PhylomeDB:Q94C37
Genevestigator:Q94C37 Uniprot:Q94C37
Length = 721
Score = 114 (45.2 bits), Expect = 0.00085, P = 0.00085
Identities = 33/123 (26%), Positives = 59/123 (47%)
Query: 68 SKMSQDDGKAGVGNSNSKRINISGRKKL-RLTIEQSRLLEDSFKL--HTTLNSKQALAEQ 124
+K ++ + G GN ++ + +K+ R T Q + +E FK H ++ L+ +
Sbjct: 42 TKSGSENQEGGSGNDQDP-LHPNKKKRYHRHTQLQIQEMEAFFKECPHPDDKQRKQLSRE 100
Query: 125 LNLEPRQVEVWFQNRRARTKLKQNEVDCEFLKKCCESLTDENKRLKKELQELQSAKAGAS 184
LNLEP QV+ WFQN+R + K + L+ E L ++N R ++ L G
Sbjct: 101 LNLEPLQVKFWFQNKRTQMKNHHERHENSHLRAENEKLRNDNLRYREALANASCPNCGGP 160
Query: 185 SPL 187
+ +
Sbjct: 161 TAI 163
>UNIPROTKB|F1N9J8 [details] [associations]
symbol:DMBX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GeneTree:ENSGT00700000104128 EMBL:AADN02012643
IPI:IPI00683833 Ensembl:ENSGALT00000016994 Uniprot:F1N9J8
Length = 303
Score = 109 (43.4 bits), Expect = 0.00086, P = 0.00086
Identities = 33/91 (36%), Positives = 48/91 (52%)
Query: 92 RKKLRLTIEQSRLLEDSF-KLH-TTLNSKQALAEQLNLEPRQVEVWFQNRRARTKLKQNE 149
R + T +Q LE +F K H + ++ LA NL +V+VWF+NRRA+ + KQ
Sbjct: 70 RSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQRS 129
Query: 150 VDCEFLKKC--CESLTDENKRLKKELQELQS 178
+ E L+K CES E K + + E QS
Sbjct: 130 LQKEQLQKQKDCESSHSEGKT-EPPVLETQS 159
>WB|WBGene00003939 [details] [associations]
symbol:pax-3 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0031581 "hemidesmosome
assembly" evidence=IGI] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
PROSITE:PS50071 PROSITE:PS51057 SMART:SM00351 SMART:SM00389
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0018991 GO:GO:0002119 GO:GO:0043565 GO:GO:0010171
GO:GO:0040011 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0040035
GO:GO:0031581 EMBL:Z48783 HSSP:P06601 EMBL:Z48582
GeneTree:ENSGT00680000099553 PIR:T21461 RefSeq:NP_496189.2
UniGene:Cel.15301 ProteinModelPortal:G5ED66 SMR:G5ED66
IntAct:G5ED66 EnsemblMetazoa:F27E5.2 GeneID:185022
KEGG:cel:CELE_F27E5.2 CTD:185022 WormBase:F27E5.2 OMA:ISIDECS
NextBio:926774 Uniprot:G5ED66
Length = 308
Score = 109 (43.4 bits), Expect = 0.00089, P = 0.00089
Identities = 28/85 (32%), Positives = 48/85 (56%)
Query: 62 LSIGSGSKMSQDDGKAGVGNSNSKRINISGRKKLRLTIEQSRLLEDSFKLHTT--LNSKQ 119
+SI SK S DD + G+S S + S R + T EQ +LE++F+ T N+++
Sbjct: 163 ISIDECSKSSSDDEE---GSSPSNDAS-SRRNRTSFTAEQLDVLENAFRADTYPHANARE 218
Query: 120 ALAEQLNLEPRQVEVWFQNRRARTK 144
+++++ L ++ WF NRRAR +
Sbjct: 219 SISKETGLSEEKIMTWFSNRRARCR 243
>UNIPROTKB|G5ED66 [details] [associations]
symbol:pax-3 "Protein PAX-3" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0005634
GO:GO:0009792 GO:GO:0002009 GO:GO:0040007 GO:GO:0018991
GO:GO:0002119 GO:GO:0043565 GO:GO:0010171 GO:GO:0040011
GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0040035 GO:GO:0031581
EMBL:Z48783 HSSP:P06601 EMBL:Z48582 GeneTree:ENSGT00680000099553
PIR:T21461 RefSeq:NP_496189.2 UniGene:Cel.15301
ProteinModelPortal:G5ED66 SMR:G5ED66 IntAct:G5ED66
EnsemblMetazoa:F27E5.2 GeneID:185022 KEGG:cel:CELE_F27E5.2
CTD:185022 WormBase:F27E5.2 OMA:ISIDECS NextBio:926774
Uniprot:G5ED66
Length = 308
Score = 109 (43.4 bits), Expect = 0.00089, P = 0.00089
Identities = 28/85 (32%), Positives = 48/85 (56%)
Query: 62 LSIGSGSKMSQDDGKAGVGNSNSKRINISGRKKLRLTIEQSRLLEDSFKLHTT--LNSKQ 119
+SI SK S DD + G+S S + S R + T EQ +LE++F+ T N+++
Sbjct: 163 ISIDECSKSSSDDEE---GSSPSNDAS-SRRNRTSFTAEQLDVLENAFRADTYPHANARE 218
Query: 120 ALAEQLNLEPRQVEVWFQNRRARTK 144
+++++ L ++ WF NRRAR +
Sbjct: 219 SISKETGLSEEKIMTWFSNRRARCR 243
>UNIPROTKB|Q9PVX0 [details] [associations]
symbol:RX2 "Retinal homeobox protein Rx2" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 HOVERGEN:HBG021349
EMBL:AB020318 IPI:IPI00590568 UniGene:Gga.27
ProteinModelPortal:Q9PVX0 SMR:Q9PVX0 Uniprot:Q9PVX0
Length = 317
Score = 109 (43.4 bits), Expect = 0.00094, P = 0.00094
Identities = 34/110 (30%), Positives = 54/110 (49%)
Query: 50 PKDEDTGRMDHNLSIGSGS-KMSQDDGKAGVGNSNSKRINISGRKKLRLTIEQSRLLEDS 108
P E GR GS S ++ DG G + + R + T Q LE +
Sbjct: 81 PPAEHQGRFQEPYCPGSASPELPAGDGGDGKPSDEEQPKKKHRRNRTTFTTYQLHELERA 140
Query: 109 F-KLH-TTLNSKQALAEQLNLEPRQVEVWFQNRRARTKLKQNEVDCEFLK 156
F K H + S++ LA ++NL +V+VWFQNRRA+ + +Q +++ +K
Sbjct: 141 FEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWR-RQEKLEVSSMK 189
>MGI|MGI:104867 [details] [associations]
symbol:Lbx1 "ladybird homeobox homolog 1 (Drosophila)"
species:10090 "Mus musculus" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0001947
"heart looping" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IMP] [GO:0021920 "regulation of transcription from RNA
polymerase II promoter involved in spinal cord association neuron
specification" evidence=IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IMP] [GO:0048663 "neuron fate commitment"
evidence=IMP] [GO:0048664 "neuron fate determination"
evidence=IGI;IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 MGI:MGI:104867
GO:GO:0008285 GO:GO:0045665 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0007517
GO:GO:0001947 GO:GO:0000976 eggNOG:NOG240187
GeneTree:ENSGT00700000104206 GO:GO:0048664 CTD:10660
HOGENOM:HOG000007247 HOVERGEN:HBG006244 KO:K09353 OMA:NSEATAG
OrthoDB:EOG4TTGJP GO:GO:0021920 EMBL:X90829 EMBL:AB108497
EMBL:BC119177 EMBL:BC120586 EMBL:AK144562 IPI:IPI00132589
RefSeq:NP_034821.2 UniGene:Mm.116815 ProteinModelPortal:P52955
SMR:P52955 IntAct:P52955 STRING:P52955 PRIDE:P52955
Ensembl:ENSMUST00000099401 GeneID:16814 KEGG:mmu:16814
UCSC:uc008hqv.1 InParanoid:P52955 NextBio:290692 Bgee:P52955
CleanEx:MM_LBX1 Genevestigator:P52955 GermOnline:ENSMUSG00000025216
Uniprot:P52955
Length = 282
Score = 108 (43.1 bits), Expect = 0.00097, P = 0.00097
Identities = 44/151 (29%), Positives = 66/151 (43%)
Query: 37 AARAFLDLSFTLCPKDEDTGRMDHNLSIGSGSKMSQDDGKAGVGNSNSKRINISGRK-KL 95
A RA L + LC +E + L + S + +G+ G+ ++ RK +
Sbjct: 74 AGRALLSQTSPLCALEELASKTFKGLEV---SVLQAAEGRDGMTIFGQRQTPKKRRKSRT 130
Query: 96 RLTIEQSRLLEDSFKLHTTLN--SKQALAEQLNLEPRQVEVWFQNRRARTK--LKQNEVD 151
T Q LE F L+ + +A+QL L QV WFQNRRA+ K L++ + D
Sbjct: 131 AFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKAD 190
Query: 152 CEFLKKCCESLTDENKRLKKELQELQSAKAG 182
E KK S + L EL++ A G
Sbjct: 191 VESAKKLGPSGQMDIVALA-ELEQNSEASGG 220
>TAIR|locus:2098866 [details] [associations]
symbol:HDG1 "AT3G61150" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL137898 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 HOGENOM:HOG000243256
ProtClustDB:CLSN2685237 KO:K09338 EMBL:AJ224338 EMBL:AY050866
EMBL:AY096757 IPI:IPI00541112 PIR:T47907 RefSeq:NP_191674.1
UniGene:At.21209 HSSP:Q8C172 ProteinModelPortal:Q9M2E8 SMR:Q9M2E8
IntAct:Q9M2E8 PaxDb:Q9M2E8 PRIDE:Q9M2E8 EnsemblPlants:AT3G61150.1
GeneID:825287 KEGG:ath:AT3G61150 TAIR:At3g61150 eggNOG:NOG267226
InParanoid:Q9M2E8 OMA:HTEYDEN PhylomeDB:Q9M2E8
Genevestigator:Q9M2E8 Uniprot:Q9M2E8
Length = 808
Score = 114 (45.2 bits), Expect = 0.00098, P = 0.00098
Identities = 34/119 (28%), Positives = 58/119 (48%)
Query: 68 SKMSQDDGKAGVGNS--NSKRINISGRKKLRLTIEQSRLLEDSFK--LHTTLNSKQALAE 123
S+ D+ +A G+ S R ++ R T +Q + LE FK H + L+
Sbjct: 86 SRSESDNAEAVSGDDLDTSDRPLKKKKRYHRHTPKQIQDLESVFKECAHPDEKQRLDLSR 145
Query: 124 QLNLEPRQVEVWFQNRRARTKLKQNEVDCEFLKKCCESLTDENKRLKKELQELQSAKAG 182
+LNL+PRQV+ WFQNRR + K + + L++ + L EN +++ ++ G
Sbjct: 146 RLNLDPRQVKFWFQNRRTQMKTQIERHENALLRQENDKLRAENMSVREAMRNPMCGNCG 204
>RGD|1564197 [details] [associations]
symbol:Lbx1 "ladybird homeobox 1" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0001947 "heart
looping" evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISO]
[GO:0005667 "transcription factor complex" evidence=IEA;ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0007517 "muscle organ development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA;ISO] [GO:0021920 "regulation of transcription from RNA
polymerase II promoter involved in spinal cord association neuron
specification" evidence=IEA;ISO] [GO:0045665 "negative regulation
of neuron differentiation" evidence=IEA;ISO] [GO:0048663 "neuron
fate commitment" evidence=ISO] [GO:0048664 "neuron fate
determination" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1564197 GO:GO:0008285 GO:GO:0045665 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0007517 GO:GO:0001947 GO:GO:0000976 eggNOG:NOG240187
GeneTree:ENSGT00700000104206 GO:GO:0048664 CTD:10660
HOGENOM:HOG000007247 HOVERGEN:HBG006244 KO:K09353 OrthoDB:EOG4TTGJP
GO:GO:0021920 EMBL:AB197923 IPI:IPI00392001 RefSeq:NP_001040573.1
UniGene:Rn.194904 ProteinModelPortal:Q1XID0 PRIDE:Q1XID0
Ensembl:ENSRNOT00000021748 GeneID:499362 KEGG:rno:499362
NextBio:702666 Genevestigator:Q1XID0 Uniprot:Q1XID0
Length = 285
Score = 108 (43.1 bits), Expect = 0.00099, P = 0.00099
Identities = 44/151 (29%), Positives = 66/151 (43%)
Query: 37 AARAFLDLSFTLCPKDEDTGRMDHNLSIGSGSKMSQDDGKAGVGNSNSKRINISGRK-KL 95
A RA L + LC +E + L + S + +G+ G+ ++ RK +
Sbjct: 74 AGRALLSQTSPLCALEELASKTFKGLEV---SVLQAAEGRDGMTIFGQRQTPKKRRKSRT 130
Query: 96 RLTIEQSRLLEDSFKLHTTLN--SKQALAEQLNLEPRQVEVWFQNRRARTK--LKQNEVD 151
T Q LE F L+ + +A+QL L QV WFQNRRA+ K L++ + D
Sbjct: 131 AFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKAD 190
Query: 152 CEFLKKCCESLTDENKRLKKELQELQSAKAG 182
E KK S + L EL++ A G
Sbjct: 191 VESAKKLGPSGQMDIVALA-ELEQNSEASGG 220
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.127 0.364 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 237 237 0.00090 113 3 11 23 0.48 33
32 0.43 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 124
No. of states in DFA: 598 (64 KB)
Total size of DFA: 184 KB (2106 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.35u 0.16s 27.51t Elapsed: 00:00:02
Total cpu time: 27.36u 0.16s 27.52t Elapsed: 00:00:02
Start: Fri May 10 17:23:45 2013 End: Fri May 10 17:23:47 2013
WARNINGS ISSUED: 1