BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042634
(427 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 111/245 (45%), Gaps = 35/245 (14%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
HRNL+++ C + LVY +M NGS+ L E+ L+ +R IA+
Sbjct: 86 HRNLLRLRGFCMT-----PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGS 140
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP-------EATNNFFN 293
A L YLH +C+ I+H D+K +N+LLD E A VGDFGLAK + A
Sbjct: 141 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIG 200
Query: 294 FQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGN---LTLHNFVKEALPE-R 349
EY + S DV+ +G++LLE TG+R + N + L ++VK L E +
Sbjct: 201 HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 260
Query: 350 LAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409
L +VD L ++ E + ++ + + C+ P ER M E
Sbjct: 261 LEALVDVDLQGNYKDEEVEQ-------------------LIQVALLCTQSSPMERPKMSE 301
Query: 410 VAAQL 414
V L
Sbjct: 302 VVRML 306
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 111/245 (45%), Gaps = 35/245 (14%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
HRNL+++ C + LVY +M NGS+ L E+ L+ +R IA+
Sbjct: 94 HRNLLRLRGFCMT-----PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGS 148
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP-------EATNNFFN 293
A L YLH +C+ I+H D+K +N+LLD E A VGDFGLAK + A
Sbjct: 149 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIG 208
Query: 294 FQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGN---LTLHNFVKEALPE-R 349
EY + S DV+ +G++LLE TG+R + N + L ++VK L E +
Sbjct: 209 HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 268
Query: 350 LAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409
L +VD L ++ E + ++ + + C+ P ER M E
Sbjct: 269 LEALVDVDLQGNYKDEEVEQ-------------------LIQVALLCTQSSPMERPKMSE 309
Query: 410 VAAQL 414
V L
Sbjct: 310 VVRML 314
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 103/205 (50%), Gaps = 5/205 (2%)
Query: 4 LVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPS 63
L N FTG+IP ++ + +L L L N G IPSS+G+L+ L L NMLEG IP
Sbjct: 398 LQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ 457
Query: 64 SLGKCQXXXXXXXXXXXXTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAI 123
L + TG P+ + ++L+ ++ LS N+L G +P G L+NL +
Sbjct: 458 ELMYVKTLETLILDFNDLTGEIPSGLSNCTNLN-WISLSNNRLTGEIPKWIGRLENLAIL 516
Query: 124 DISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDL---SRNNFIR 180
+S N SG IP+ +G C L L +N N F G IP+++ G + R +I+
Sbjct: 517 KLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIK 576
Query: 181 HRNLVKIITSCAS-VDFQGNDSEAL 204
+ + K + ++FQG SE L
Sbjct: 577 NDGMKKECHGAGNLLEFQGIRSEQL 601
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 91/177 (51%), Gaps = 3/177 (1%)
Query: 4 LVGNQFTGRIPGSIGDLHK--LQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSI 61
L N F+G I ++ K LQ L L+ N F G+IP ++ N + L++L+ + N L G+I
Sbjct: 372 LSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTI 431
Query: 62 PSSLGKCQXXXXXXXXXXXXTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLG 121
PSSLG G P E++ + +L + L N L G +PS NL
Sbjct: 432 PSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLI-LDFNDLTGEIPSGLSNCTNLN 490
Query: 122 AIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNF 178
I +S N+L+G+IP IG L L ++ N F GNIP+ L R + LDL+ N F
Sbjct: 491 WISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLF 547
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 106/269 (39%), Gaps = 27/269 (10%)
Query: 3 TLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIP 62
+L N+ TG IP IG L L L L N F G IP+ +G+ LI L+ N+ G+IP
Sbjct: 493 SLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 552
Query: 63 SSLGK-----CQXXXXXXXXXXXXTGTTPTEVIGLSSLSIYLDLSQNQLN---------- 107
+++ K E G +L + + QLN
Sbjct: 553 AAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNI 612
Query: 108 ------GPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSS 161
G F ++ +D+S N LSG IP IGS L L + N G+IP
Sbjct: 613 TSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDE 672
Query: 162 LSSLRGIENLDLSRNNFI-RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP 220
+ LRG+ LDLS N R + +T +D N+ + E G E + P
Sbjct: 673 VGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM---GQFETF--P 727
Query: 221 NREALKNLNLLQRLSIAVDVASALDYLHH 249
+ L N L D ++A Y HH
Sbjct: 728 PAKFLNNPGLCGYPLPRCDPSNADGYAHH 756
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 79/174 (45%), Gaps = 5/174 (2%)
Query: 7 NQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLG 66
N F+ IP +GD LQ L + NK G+ +I T L LN + N G IP
Sbjct: 207 NNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL-- 263
Query: 67 KCQXXXXXXXXXXXXTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDIS 126
+ TG P + G LDLS N G +P FG L ++ +S
Sbjct: 264 PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALS 323
Query: 127 ENKLSGQIPSSIGSCIR-LEQLVMNGNFFRGNIPSSLSSLRG-IENLDLSRNNF 178
N SG++P +R L+ L ++ N F G +P SL++L + LDLS NNF
Sbjct: 324 SNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNF 377
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 101 LSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIP--SSIGSCIRLEQLVMNGNF--FRG 156
LS + +NG + S F +L ++D+S N LSG + +S+GSC L+ L ++ N F G
Sbjct: 81 LSNSHINGSV-SGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPG 139
Query: 157 NIPSSLSSLRGIENLDLSRNNFIRHRNLVKIITS 190
+ L L +E LDLS N+ I N+V + S
Sbjct: 140 KVSGGL-KLNSLEVLDLSANS-ISGANVVGWVLS 171
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 103/205 (50%), Gaps = 5/205 (2%)
Query: 4 LVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPS 63
L N FTG+IP ++ + +L L L N G IPSS+G+L+ L L NMLEG IP
Sbjct: 401 LQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ 460
Query: 64 SLGKCQXXXXXXXXXXXXTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAI 123
L + TG P+ + ++L+ ++ LS N+L G +P G L+NL +
Sbjct: 461 ELMYVKTLETLILDFNDLTGEIPSGLSNCTNLN-WISLSNNRLTGEIPKWIGRLENLAIL 519
Query: 124 DISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDL---SRNNFIR 180
+S N SG IP+ +G C L L +N N F G IP+++ G + R +I+
Sbjct: 520 KLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIK 579
Query: 181 HRNLVKIITSCAS-VDFQGNDSEAL 204
+ + K + ++FQG SE L
Sbjct: 580 NDGMKKECHGAGNLLEFQGIRSEQL 604
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 91/177 (51%), Gaps = 3/177 (1%)
Query: 4 LVGNQFTGRIPGSIGDLHK--LQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSI 61
L N F+G I ++ K LQ L L+ N F G+IP ++ N + L++L+ + N L G+I
Sbjct: 375 LSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTI 434
Query: 62 PSSLGKCQXXXXXXXXXXXXTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLG 121
PSSLG G P E++ + +L + L N L G +PS NL
Sbjct: 435 PSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLI-LDFNDLTGEIPSGLSNCTNLN 493
Query: 122 AIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNF 178
I +S N+L+G+IP IG L L ++ N F GNIP+ L R + LDL+ N F
Sbjct: 494 WISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLF 550
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 91/228 (39%), Gaps = 22/228 (9%)
Query: 3 TLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIP 62
+L N+ TG IP IG L L L L N F G IP+ +G+ LI L+ N+ G+IP
Sbjct: 496 SLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 555
Query: 63 SSLGK-----CQXXXXXXXXXXXXTGTTPTEVIGLSSLSIYLDLSQNQLN---------- 107
+++ K E G +L + + QLN
Sbjct: 556 AAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNI 615
Query: 108 ------GPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSS 161
G F ++ +D+S N LSG IP IGS L L + N G+IP
Sbjct: 616 TSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDE 675
Query: 162 LSSLRGIENLDLSRNNFI-RHRNLVKIITSCASVDFQGNDSEALVYEF 208
+ LRG+ LDLS N R + +T +D N+ + E
Sbjct: 676 VGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM 723
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 79/174 (45%), Gaps = 5/174 (2%)
Query: 7 NQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLG 66
N F+ IP +GD LQ L + NK G+ +I T L LN + N G IP
Sbjct: 210 NNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL-- 266
Query: 67 KCQXXXXXXXXXXXXTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDIS 126
+ TG P + G LDLS N G +P FG L ++ +S
Sbjct: 267 PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALS 326
Query: 127 ENKLSGQIPSSIGSCIR-LEQLVMNGNFFRGNIPSSLSSLRG-IENLDLSRNNF 178
N SG++P +R L+ L ++ N F G +P SL++L + LDLS NNF
Sbjct: 327 SNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNF 380
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 101 LSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIP--SSIGSCIRLEQLVMNGNF--FRG 156
LS + +NG + S F +L ++D+S N LSG + +S+GSC L+ L ++ N F G
Sbjct: 84 LSNSHINGSV-SGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPG 142
Query: 157 NIPSSLSSLRGIENLDLSRNNFIRHRNLVKIITS 190
+ L L +E LDLS N+ I N+V + S
Sbjct: 143 KVSGGL-KLNSLEVLDLSANS-ISGANVVGWVLS 174
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 86/165 (52%), Gaps = 18/165 (10%)
Query: 176 NNFIRHRNLVKIITSCASVDFQGNDSE----ALVYEFMVNGSLEEWLHPNREALKNLNLL 231
N F+R ++K + V F G ++ ++V E++ GSL LH A + L+
Sbjct: 79 NEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLH-KSGAREQLDER 137
Query: 232 QRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF 291
+RLS+A DVA ++YLH+ PIVH DLK N+L+D + T V DFGL++ + F
Sbjct: 138 RRLSMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL---KASXF 193
Query: 292 FNFQIA---EYGMGSEV------STSGDVYSFGILLLETFTGKRP 327
+ A M EV + DVYSFG++L E T ++P
Sbjct: 194 LXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 88/194 (45%), Gaps = 22/194 (11%)
Query: 177 NFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSI 236
+F RH +LV +I C + L+Y++M NG+L+ L+ + +++ QRL I
Sbjct: 90 SFCRHPHLVSLIGFCDE-----RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEI 144
Query: 237 AVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK--------FLPEAT 288
+ A L YLH I+H D+K N+LLD + DFG++K L
Sbjct: 145 CIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVV 201
Query: 289 NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEALPE 348
+ EY + ++ DVYSFG++L E + + + N + A+
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMV--NLAEWAVES 259
Query: 349 ----RLAEIVDPVL 358
+L +IVDP L
Sbjct: 260 HNNGQLEQIVDPNL 273
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 88/194 (45%), Gaps = 22/194 (11%)
Query: 177 NFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSI 236
+F RH +LV +I C + L+Y++M NG+L+ L+ + +++ QRL I
Sbjct: 90 SFCRHPHLVSLIGFCDE-----RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEI 144
Query: 237 AVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK--------FLPEAT 288
+ A L YLH I+H D+K N+LLD + DFG++K L
Sbjct: 145 CIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVV 201
Query: 289 NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEALPE 348
+ EY + ++ DVYSFG++L E + + + N + A+
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMV--NLAEWAVES 259
Query: 349 ----RLAEIVDPVL 358
+L +IVDP L
Sbjct: 260 HNNGQLEQIVDPNL 273
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 87/165 (52%), Gaps = 18/165 (10%)
Query: 176 NNFIRHRNLVKIITSCASVDFQGNDSE----ALVYEFMVNGSLEEWLHPNREALKNLNLL 231
N F+R ++K + V F G ++ ++V E++ GSL LH A + L+
Sbjct: 79 NEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLH-KSGAREQLDER 137
Query: 232 QRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF 291
+RLS+A DVA ++YLH+ PIVH +LK N+L+D + T V DFGL++ + F
Sbjct: 138 RRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL---KASTF 193
Query: 292 FNFQIA---EYGMGSEV------STSGDVYSFGILLLETFTGKRP 327
+ + A M EV + DVYSFG++L E T ++P
Sbjct: 194 LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 77/155 (49%), Gaps = 20/155 (12%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
++H N+VK C S G + L+ E++ GSL ++L ++E + ++ LLQ S
Sbjct: 68 LQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS--- 121
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN----- 293
+ ++YL +H DL N+L++ E +GDFGL K LP+ FF
Sbjct: 122 QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEFFKVKEPG 177
Query: 294 -----FQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ E S+ S + DV+SFG++L E FT
Sbjct: 178 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 18/154 (11%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
++H N+VK C S G + L+ EF+ GSL E+L ++E + ++ LLQ S
Sbjct: 71 LQHDNIVKYKGVCYSA---GRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTS--- 124
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP---------EATN 289
+ ++YL +H DL N+L++ E +GDFGL K LP E
Sbjct: 125 QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 181
Query: 290 NFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + E S+ S + DV+SFG++L E FT
Sbjct: 182 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 18/154 (11%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
++H N+VK C S G + L+ E++ GSL ++L ++E + ++ LLQ S
Sbjct: 86 LQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS--- 139
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP---------EATN 289
+ ++YL +H DL N+L++ E +GDFGL K LP E
Sbjct: 140 QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 196
Query: 290 NFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + E S+ S + DV+SFG++L E FT
Sbjct: 197 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 18/154 (11%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
++H N+VK C S G + L+ E++ GSL ++L ++E + ++ LLQ S
Sbjct: 86 LQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS--- 139
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP---------EATN 289
+ ++YL +H DL N+L++ E +GDFGL K LP E
Sbjct: 140 QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 196
Query: 290 NFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + E S+ S + DV+SFG++L E FT
Sbjct: 197 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 18/154 (11%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
++H N+VK C S G + L+ E++ GSL ++L ++E + ++ LLQ S
Sbjct: 66 LQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS--- 119
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP---------EATN 289
+ ++YL +H DL N+L++ E +GDFGL K LP E
Sbjct: 120 QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 176
Query: 290 NFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + E S+ S + DV+SFG++L E FT
Sbjct: 177 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 18/154 (11%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
++H N+VK C S G + L+ E++ GSL ++L ++E + ++ LLQ S
Sbjct: 72 LQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS--- 125
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP---------EATN 289
+ ++YL +H DL N+L++ E +GDFGL K LP E
Sbjct: 126 QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 182
Query: 290 NFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + E S+ S + DV+SFG++L E FT
Sbjct: 183 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 18/154 (11%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
++H N+VK C S G + L+ E++ GSL ++L ++E + ++ LLQ S
Sbjct: 68 LQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS--- 121
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP---------EATN 289
+ ++YL +H DL N+L++ E +GDFGL K LP E
Sbjct: 122 QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 178
Query: 290 NFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + E S+ S + DV+SFG++L E FT
Sbjct: 179 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 18/154 (11%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
++H N+VK C S G + L+ E++ GSL ++L ++E + ++ LLQ S
Sbjct: 68 LQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS--- 121
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP---------EATN 289
+ ++YL +H DL N+L++ E +GDFGL K LP E
Sbjct: 122 QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 178
Query: 290 NFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + E S+ S + DV+SFG++L E FT
Sbjct: 179 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 18/154 (11%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
++H N+VK C S G + L+ E++ GSL ++L ++E + ++ LLQ S
Sbjct: 67 LQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS--- 120
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP---------EATN 289
+ ++YL +H DL N+L++ E +GDFGL K LP E
Sbjct: 121 QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 177
Query: 290 NFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + E S+ S + DV+SFG++L E FT
Sbjct: 178 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 16/158 (10%)
Query: 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVD 239
+H NLV+++ + D LVY +M NGSL + L + L+ R IA
Sbjct: 88 QHENLVELLGFSSD-----GDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWHMRCKIAQG 141
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQI--- 296
A+ +++LH E +H D+K +N+LLD TA + DFGLA+ + +I
Sbjct: 142 AANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGT 198
Query: 297 ----AEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNE 330
A + E++ D+YSFG++LLE TG +E
Sbjct: 199 TAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDE 236
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 18/154 (11%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
++H N+VK C S G + L+ E++ GSL ++L ++E + ++ LLQ S
Sbjct: 99 LQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS--- 152
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP---------EATN 289
+ ++YL +H DL N+L++ E +GDFGL K LP E
Sbjct: 153 QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 209
Query: 290 NFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + E S+ S + DV+SFG++L E FT
Sbjct: 210 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 18/154 (11%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
++H N+VK C S G + L+ E++ GSL ++L ++E + ++ LLQ S
Sbjct: 71 LQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS--- 124
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP---------EATN 289
+ ++YL +H DL N+L++ E +GDFGL K LP E
Sbjct: 125 QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 181
Query: 290 NFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + E S+ S + DV+SFG++L E FT
Sbjct: 182 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 18/154 (11%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
++H N+VK C S G + L+ E++ GSL ++L ++E + ++ LLQ S
Sbjct: 75 LQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS--- 128
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP---------EATN 289
+ ++YL +H DL N+L++ E +GDFGL K LP E
Sbjct: 129 QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 185
Query: 290 NFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + E S+ S + DV+SFG++L E FT
Sbjct: 186 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 16/158 (10%)
Query: 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVD 239
+H NLV+++ + D LVY +M NGSL + L + L+ R IA
Sbjct: 82 QHENLVELLGFSSD-----GDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWHMRCKIAQG 135
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQI--- 296
A+ +++LH E +H D+K +N+LLD TA + DFGLA+ + +I
Sbjct: 136 AANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGT 192
Query: 297 ----AEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNE 330
A + E++ D+YSFG++LLE TG +E
Sbjct: 193 TAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDE 230
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 18/154 (11%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
++H N+VK C S G + L+ E++ GSL ++L ++E + ++ LLQ S
Sbjct: 74 LQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS--- 127
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP---------EATN 289
+ ++YL +H DL N+L++ E +GDFGL K LP E
Sbjct: 128 QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 184
Query: 290 NFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + E S+ S + DV+SFG++L E FT
Sbjct: 185 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 18/154 (11%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
++H N+VK C S G + L+ E++ GSL ++L ++E + ++ LLQ S
Sbjct: 73 LQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS--- 126
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP---------EATN 289
+ ++YL +H DL N+L++ E +GDFGL K LP E
Sbjct: 127 QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 183
Query: 290 NFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + E S+ S + DV+SFG++L E FT
Sbjct: 184 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 16/158 (10%)
Query: 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVD 239
+H NLV+++ + D LVY +M NGSL + L + L+ R IA
Sbjct: 88 QHENLVELLGFSSD-----GDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWHMRCKIAQG 141
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQI--- 296
A+ +++LH E +H D+K +N+LLD TA + DFGLA+ + +I
Sbjct: 142 AANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGT 198
Query: 297 ----AEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNE 330
A + E++ D+YSFG++LLE TG +E
Sbjct: 199 TAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDE 236
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 78/157 (49%), Gaps = 24/157 (15%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
++H N+VK C S G + L+ E++ GSL ++L ++E + ++ LLQ S
Sbjct: 69 LQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS--- 122
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAE 298
+ ++YL +H +L N+L++ E +GDFGL K LP+ +++ E
Sbjct: 123 QICKGMEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKE---YYKVKE 176
Query: 299 YGMG------------SEVSTSGDVYSFGILLLETFT 323
G S+ S + DV+SFG++L E FT
Sbjct: 177 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 20/164 (12%)
Query: 169 ENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNL 228
+ +++ RN + H N+VK C G + L+ EF+ +GSL+E+L N+ +
Sbjct: 60 KEIEILRN--LYHENIVKYKGICTE---DGGNGIKLIMEFLPSGSLKEYLPKNKN---KI 111
Query: 229 NLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL---- 284
NL Q+L AV + +DYL VH DL NVL++ E +GDFGL K +
Sbjct: 112 NLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 168
Query: 285 -----PEATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ ++ + E M S+ + DV+SFG+ L E T
Sbjct: 169 EXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 20/164 (12%)
Query: 169 ENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNL 228
+ +++ RN + H N+VK C G + L+ EF+ +GSL+E+L N+ +
Sbjct: 72 KEIEILRN--LYHENIVKYKGICTE---DGGNGIKLIMEFLPSGSLKEYLPKNK---NKI 123
Query: 229 NLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL---- 284
NL Q+L AV + +DYL VH DL NVL++ E +GDFGL K +
Sbjct: 124 NLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 180
Query: 285 -----PEATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ ++ + E M S+ + DV+SFG+ L E T
Sbjct: 181 EXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 18/154 (11%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
++H N+VK C S G + L+ E++ GSL ++L + E + ++ LLQ S
Sbjct: 71 LQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTS--- 124
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP---------EATN 289
+ ++YL +H DL N+L++ E +GDFGL K LP E
Sbjct: 125 QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 181
Query: 290 NFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + E S+ S + DV+SFG++L E FT
Sbjct: 182 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 168 IENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKN 227
+E LSR N H N+VK+ +C + LV E+ GSL LH E L
Sbjct: 51 VELRQLSRVN---HPNIVKLYGACL-------NPVCLVMEYAEGGSLYNVLH-GAEPLPY 99
Query: 228 LNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLL-DGELTAHVGDFGLA-KFLP 285
+S + + + YLH ++H DLKP N+LL G + DFG A
Sbjct: 100 YTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 159
Query: 286 EATNNFFN--FQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEM----FTGNLTLH 339
TNN + + E GS S DV+S+GI+L E T ++P +E+ F +H
Sbjct: 160 HMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVH 219
Query: 340 NFVKEALPERLAEIVDPVL 358
N + L + L + ++ ++
Sbjct: 220 NGTRPPLIKNLPKPIESLM 238
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 77/158 (48%), Gaps = 16/158 (10%)
Query: 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVD 239
+H NLV+++ + D LVY + NGSL + L + L+ R IA
Sbjct: 79 QHENLVELLGFSSD-----GDDLCLVYVYXPNGSLLDRL-SCLDGTPPLSWHXRCKIAQG 132
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQI--- 296
A+ +++LH E +H D+K +N+LLD TA + DFGLA+ + +I
Sbjct: 133 AANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGT 189
Query: 297 ----AEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNE 330
A + E++ D+YSFG++LLE TG +E
Sbjct: 190 TAYXAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDE 227
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 31/175 (17%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPN------------REALK 226
++H ++VK C D +V+E+M +G L ++L + R+A
Sbjct: 74 LQHEHIVKFYGVCGD-----GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKG 128
Query: 227 NLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPE 286
L L Q L IA +AS + YL VH DL N L+ L +GDFG+++ +
Sbjct: 129 ELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDV-Y 184
Query: 287 ATNNF---------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNEM 331
+T+ + + E M + +T DV+SFG++L E FT GK+P ++
Sbjct: 185 STDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQL 239
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 168 IENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKN 227
+E LSR N H N+VK+ +C + LV E+ GSL LH E L
Sbjct: 50 VELRQLSRVN---HPNIVKLYGACL-------NPVCLVMEYAEGGSLYNVLH-GAEPLPY 98
Query: 228 LNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLL-DGELTAHVGDFGLA-KFLP 285
+S + + + YLH ++H DLKP N+LL G + DFG A
Sbjct: 99 YTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 158
Query: 286 EATNNFFN--FQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEM----FTGNLTLH 339
TNN + + E GS S DV+S+GI+L E T ++P +E+ F +H
Sbjct: 159 HMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVH 218
Query: 340 NFVKEALPERLAEIVDPVL 358
N + L + L + ++ ++
Sbjct: 219 NGTRPPLIKNLPKPIESLM 237
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 46/225 (20%)
Query: 139 GSCIRLEQLVMNGNFF-----RGNIPSSLSSLRGIENL-----DLSRNNFIR-------- 180
SCI++E+++ G F R +P I+ L D R +F+
Sbjct: 7 ASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQF 66
Query: 181 -HRNLVK---IITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSI 236
H N++ ++T C V ++ E+M NGSL+ +L N ++Q + +
Sbjct: 67 DHPNIIHLEGVVTKCKPV--------MIITEYMENGSLDAFLRKND---GRFTVIQLVGM 115
Query: 237 AVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL---PEATNNFFN 293
+ S + YL + VH DL N+L++ L V DFG+++ L PEA
Sbjct: 116 LRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRG 172
Query: 294 FQIAEYGMGSEV------STSGDVYSFGILLLETFT-GKRPTNEM 331
+I E +++ DV+S+GI++ E + G+RP +M
Sbjct: 173 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 217
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 46/225 (20%)
Query: 139 GSCIRLEQLVMNGNFF-----RGNIPSSLSSLRGIENL-----DLSRNNFIR-------- 180
SCI++E+++ G F R +P I+ L D R +F+
Sbjct: 13 ASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQF 72
Query: 181 -HRNLVK---IITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSI 236
H N++ ++T C V ++ E+M NGSL+ +L N ++Q + +
Sbjct: 73 DHPNIIHLEGVVTKCKPV--------MIITEYMENGSLDAFLRKND---GRFTVIQLVGM 121
Query: 237 AVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL---PEATNNFFN 293
+ S + YL + VH DL N+L++ L V DFG+++ L PEA
Sbjct: 122 LRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRG 178
Query: 294 FQIAEYGMGSEV------STSGDVYSFGILLLETFT-GKRPTNEM 331
+I E +++ DV+S+GI++ E + G+RP +M
Sbjct: 179 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 223
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 46/225 (20%)
Query: 139 GSCIRLEQLVMNGNFF-----RGNIPSSLSSLRGIENL-----DLSRNNFIR-------- 180
SCI++E+++ G F R +P I+ L D R +F+
Sbjct: 28 ASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQF 87
Query: 181 -HRNLVK---IITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSI 236
H N++ ++T C V ++ E+M NGSL+ +L N ++Q + +
Sbjct: 88 DHPNIIHLEGVVTKCKPV--------MIITEYMENGSLDAFLRKND---GRFTVIQLVGM 136
Query: 237 AVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL---PEATNNFFN 293
+ S + YL + VH DL N+L++ L V DFG+++ L PEA
Sbjct: 137 LRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRG 193
Query: 294 FQIAEYGMGSEV------STSGDVYSFGILLLETFT-GKRPTNEM 331
+I E +++ DV+S+GI++ E + G+RP +M
Sbjct: 194 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 238
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 24/198 (12%)
Query: 151 GNFFRGNIPSSLSSLRGIENLDLSRNNFIRHRNLVKIITSCASVD------FQGNDSEAL 204
G ++G ++ ++ ++ +D + F RN V ++ V+ + D+ A+
Sbjct: 50 GTVYKGKWHGDVA-VKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAI 108
Query: 205 VYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSN 264
V ++ SL + LH + + Q + IA A +DYLH I+H D+K +N
Sbjct: 109 VTQWCEGSSLYKHLHVQETKFQ---MFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNN 162
Query: 265 VLLDGELTAHVGDFGLAKF-----------LPEATNNFFNFQIAEYGMGSEVSTSGDVYS 313
+ L LT +GDFGLA P + + ++ + S DVYS
Sbjct: 163 IFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYS 222
Query: 314 FGILLLETFTGKRPTNEM 331
+GI+L E TG+ P + +
Sbjct: 223 YGIVLYELMTGELPYSHI 240
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 49/232 (21%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H+N+V +I VD + +D LV E++ +L E++ + ++VD
Sbjct: 70 HQNIVSMI----DVD-EEDDCYYLVMEYIEGPTLSEYIESHG------------PLSVDT 112
Query: 241 A-----SALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA----TNNF 291
A LD + H + IVH D+KP N+L+D T + DFG+AK L E TN+
Sbjct: 113 AINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHV 172
Query: 292 F---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNF------- 341
+ E G D+YS GI+L E G+ P N ++ + +
Sbjct: 173 LGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNV 232
Query: 342 ---VKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVL 390
V++ +P+ L+ ++ E KAN +K +K+ L SVL
Sbjct: 233 TTDVRKDIPQSLSNVI-------LRATEKDKANRYKTIQE---MKDDLSSVL 274
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 103/220 (46%), Gaps = 36/220 (16%)
Query: 140 SCIRLEQLVMNGNFFRGNIPSSLSSLRGIENL------------DLSRNNFIRHRNLVKI 187
SC+++EQ++ G F G + S L G + + R +F+ +++
Sbjct: 33 SCVKIEQVIGAGEF--GEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQ 90
Query: 188 ITSCASVDFQGNDSEA----LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASA 243
+ +G +++ ++ EFM NGSL+ +L R+ ++Q + + +A+
Sbjct: 91 FDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL---RQNDGQFTVIQLVGMLRGIAAG 147
Query: 244 LDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNN-----------FF 292
+ YL + VH DL N+L++ L V DFGL++FL + T++
Sbjct: 148 MKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPI 204
Query: 293 NFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNEM 331
+ E + +++ DV+S+GI++ E + G+RP +M
Sbjct: 205 RWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 244
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 78/195 (40%), Gaps = 24/195 (12%)
Query: 7 NQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLG 66
N G IP +I L +L L + G IP + + L+TL+F+ N L G++P S+
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146
Query: 67 KCQXXXXXXXXXXXXTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDIS 126
+G P S L + +S+N+L G +P F L NL +D+S
Sbjct: 147 SLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLS 205
Query: 127 ENKLSGQIP-----------------------SSIGSCIRLEQLVMNGNFFRGNIPSSLS 163
N L G +G L L + N G +P L+
Sbjct: 206 RNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLT 265
Query: 164 SLRGIENLDLSRNNF 178
L+ + +L++S NN
Sbjct: 266 QLKFLHSLNVSFNNL 280
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 73/166 (43%), Gaps = 28/166 (16%)
Query: 13 IPGSIGDLHKLQRLTLE-MNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQXX 71
IP S+ +L L L + +N G IP +I LT L L + G+IP L + +
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 72 XXXXXXXXXXTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLS 131
+ LD S N L+G LP + L NL I N++S
Sbjct: 128 -------------------------VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRIS 162
Query: 132 GQIPSSIGSCIRL-EQLVMNGNFFRGNIPSSLSSLRGIENLDLSRN 176
G IP S GS +L + ++ N G IP + ++L + +DLSRN
Sbjct: 163 GAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRN 207
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 63/139 (45%), Gaps = 10/139 (7%)
Query: 1 AFTLVGNQFTGRIPGSIGDLHKL-QRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEG 59
T GN+ +G IP S G KL +T+ N+ G+IP + NL L ++ + NMLEG
Sbjct: 153 GITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAF-VDLSRNMLEG 211
Query: 60 SIPSSLGK---CQXXXXXXXXXXXXTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGI 116
G Q G +GLS LDL N++ G LP
Sbjct: 212 DASVLFGSDKNTQKIHLAKNSLAFDLGK-----VGLSKNLNGLDLRNNRIYGTLPQGLTQ 266
Query: 117 LKNLGAIDISENKLSGQIP 135
LK L ++++S N L G+IP
Sbjct: 267 LKFLHSLNVSFNNLCGEIP 285
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 64/136 (47%), Gaps = 17/136 (12%)
Query: 203 ALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKP 262
A+V ++ SL LH + + L+ IA A +DYLH I+H DLK
Sbjct: 106 AIVTQWCEGSSLYHHLHIIETKFEMIKLI---DIARQTAQGMDYLH---AKSIIHRDLKS 159
Query: 263 SNVLLDGELTAHVGDFGLA--KFLPEATNNFFNFQIAEYGMGSEV---------STSGDV 311
+N+ L +LT +GDFGLA K ++ F + M EV S DV
Sbjct: 160 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDV 219
Query: 312 YSFGILLLETFTGKRP 327
Y+FGI+L E TG+ P
Sbjct: 220 YAFGIVLYELMTGQLP 235
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 64/136 (47%), Gaps = 17/136 (12%)
Query: 203 ALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKP 262
A+V ++ SL LH + + L+ IA A +DYLH I+H DLK
Sbjct: 107 AIVTQWCEGSSLYHHLHIIETKFEMIKLI---DIARQTAQGMDYLH---AKSIIHRDLKS 160
Query: 263 SNVLLDGELTAHVGDFGLA--KFLPEATNNFFNFQIAEYGMGSEV---------STSGDV 311
+N+ L +LT +GDFGLA K ++ F + M EV S DV
Sbjct: 161 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDV 220
Query: 312 YSFGILLLETFTGKRP 327
Y+FGI+L E TG+ P
Sbjct: 221 YAFGIVLYELMTGQLP 236
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 64/136 (47%), Gaps = 17/136 (12%)
Query: 203 ALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKP 262
A+V ++ SL LH + + L+ IA A +DYLH I+H DLK
Sbjct: 99 AIVTQWCEGSSLYHHLHIIETKFEMIKLI---DIARQTAQGMDYLH---AKSIIHRDLKS 152
Query: 263 SNVLLDGELTAHVGDFGLA--KFLPEATNNFFNFQIAEYGMGSEV---------STSGDV 311
+N+ L +LT +GDFGLA K ++ F + M EV S DV
Sbjct: 153 NNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDV 212
Query: 312 YSFGILLLETFTGKRP 327
Y+FGI+L E TG+ P
Sbjct: 213 YAFGIVLYELMTGQLP 228
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 64/136 (47%), Gaps = 17/136 (12%)
Query: 203 ALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKP 262
A+V ++ SL LH + + L+ IA A +DYLH I+H DLK
Sbjct: 107 AIVTQWCEGSSLYHHLHIIETKFEMIKLI---DIARQTAQGMDYLH---AKSIIHRDLKS 160
Query: 263 SNVLLDGELTAHVGDFGLA--KFLPEATNNFFNFQIAEYGMGSEV---------STSGDV 311
+N+ L +LT +GDFGLA K ++ F + M EV S DV
Sbjct: 161 NNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDV 220
Query: 312 YSFGILLLETFTGKRP 327
Y+FGI+L E TG+ P
Sbjct: 221 YAFGIVLYELMTGQLP 236
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 64/136 (47%), Gaps = 17/136 (12%)
Query: 203 ALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKP 262
A+V ++ SL LH + + L+ IA A +DYLH I+H DLK
Sbjct: 81 AIVTQWCEGSSLYHHLHIIETKFEMIKLI---DIARQTAQGMDYLH---AKSIIHRDLKS 134
Query: 263 SNVLLDGELTAHVGDFGLA--KFLPEATNNFFNFQIAEYGMGSEV---------STSGDV 311
+N+ L +LT +GDFGLA K ++ F + M EV S DV
Sbjct: 135 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDV 194
Query: 312 YSFGILLLETFTGKRP 327
Y+FGI+L E TG+ P
Sbjct: 195 YAFGIVLYELMTGQLP 210
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 64/136 (47%), Gaps = 17/136 (12%)
Query: 203 ALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKP 262
A+V ++ SL LH + + L+ IA A +DYLH I+H DLK
Sbjct: 84 AIVTQWCEGSSLYHHLHIIETKFEMIKLI---DIARQTAQGMDYLH---AKSIIHRDLKS 137
Query: 263 SNVLLDGELTAHVGDFGLA--KFLPEATNNFFNFQIAEYGMGSEV---------STSGDV 311
+N+ L +LT +GDFGLA K ++ F + M EV S DV
Sbjct: 138 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDV 197
Query: 312 YSFGILLLETFTGKRP 327
Y+FGI+L E TG+ P
Sbjct: 198 YAFGIVLYELMTGQLP 213
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 64/136 (47%), Gaps = 17/136 (12%)
Query: 203 ALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKP 262
A+V ++ SL LH + + L+ IA A +DYLH I+H DLK
Sbjct: 84 AIVTQWCEGSSLYHHLHIIETKFEMIKLI---DIARQTAQGMDYLH---AKSIIHRDLKS 137
Query: 263 SNVLLDGELTAHVGDFGLA--KFLPEATNNFFNFQIAEYGMGSEV---------STSGDV 311
+N+ L +LT +GDFGLA K ++ F + M EV S DV
Sbjct: 138 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDV 197
Query: 312 YSFGILLLETFTGKRP 327
Y+FGI+L E TG+ P
Sbjct: 198 YAFGIVLYELMTGQLP 213
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 64/136 (47%), Gaps = 17/136 (12%)
Query: 203 ALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKP 262
A+V ++ SL LH + + L+ IA A +DYLH I+H DLK
Sbjct: 79 AIVTQWCEGSSLYHHLHIIETKFEMIKLI---DIARQTAQGMDYLH---AKSIIHRDLKS 132
Query: 263 SNVLLDGELTAHVGDFGLA--KFLPEATNNFFNFQIAEYGMGSEV---------STSGDV 311
+N+ L +LT +GDFGLA K ++ F + M EV S DV
Sbjct: 133 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDV 192
Query: 312 YSFGILLLETFTGKRP 327
Y+FGI+L E TG+ P
Sbjct: 193 YAFGIVLYELMTGQLP 208
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 64/136 (47%), Gaps = 17/136 (12%)
Query: 203 ALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKP 262
A+V ++ SL LH + + L+ IA A +DYLH I+H DLK
Sbjct: 79 AIVTQWCEGSSLYHHLHIIETKFEMIKLI---DIARQTAQGMDYLH---AKSIIHRDLKS 132
Query: 263 SNVLLDGELTAHVGDFGLA--KFLPEATNNFFNFQIAEYGMGSEV---------STSGDV 311
+N+ L +LT +GDFGLA K ++ F + M EV S DV
Sbjct: 133 NNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDV 192
Query: 312 YSFGILLLETFTGKRP 327
Y+FGI+L E TG+ P
Sbjct: 193 YAFGIVLYELMTGQLP 208
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 72/138 (52%), Gaps = 16/138 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
++ E+M NG+L+++L RE ++LQ + + +A+ + YL VH DL
Sbjct: 123 IITEYMENGALDKFL---REKDGEFSVLQLVGMLRGIAAGMKYL---ANMNYVHRDLAAR 176
Query: 264 NVLLDGELTAHVGDFGLAKFL---PEATNNFFNFQIAEYGMGSEV------STSGDVYSF 314
N+L++ L V DFGL++ L PEAT +I E +++ DV+SF
Sbjct: 177 NILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSF 236
Query: 315 GILLLETFT-GKRPTNEM 331
GI++ E T G+RP E+
Sbjct: 237 GIVMWEVMTYGERPYWEL 254
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 64/136 (47%), Gaps = 17/136 (12%)
Query: 203 ALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKP 262
A+V ++ SL LH + + L+ IA A +DYLH I+H DLK
Sbjct: 79 AIVTQWCEGSSLYHHLHIIETKFEMIKLI---DIARQTAQGMDYLH---AKSIIHRDLKS 132
Query: 263 SNVLLDGELTAHVGDFGLA--KFLPEATNNFFNFQIAEYGMGSEV---------STSGDV 311
+N+ L +LT +GDFGLA K ++ F + M EV S DV
Sbjct: 133 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDV 192
Query: 312 YSFGILLLETFTGKRP 327
Y+FGI+L E TG+ P
Sbjct: 193 YAFGIVLYELMTGQLP 208
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 18/176 (10%)
Query: 164 SLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSE----ALVYEFMVNGSLEEWLH 219
+++ I+ +S ++FI ++ ++ V G E LV+EFM +G L ++L
Sbjct: 55 AIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLR 114
Query: 220 PNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFG 279
R LL + +DV + YL C ++H DL N L+ V DFG
Sbjct: 115 TQRGLFAAETLL---GMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFG 168
Query: 280 LAKFLPE-----ATNNFFNFQIA--EYGMGSEVSTSGDVYSFGILLLETFT-GKRP 327
+ +F+ + +T F + A E S S+ DV+SFG+L+ E F+ GK P
Sbjct: 169 MTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 224
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 16/138 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
+V E+M NGSL+ +L R+ ++Q + + +AS + YL + VH DL
Sbjct: 123 IVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAAR 176
Query: 264 NVLLDGELTAHVGDFGLAKFL---PEATNNFFNFQIAEYGMGSEV------STSGDVYSF 314
N+L++ L V DFGLA+ L PEA +I E +++ DV+S+
Sbjct: 177 NILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 236
Query: 315 GILLLETFT-GKRPTNEM 331
GI+L E + G+RP EM
Sbjct: 237 GIVLWEVMSYGERPYWEM 254
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 78/170 (45%), Gaps = 34/170 (20%)
Query: 169 ENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNL 228
+ +D+ R + H +++K C QG S LV E++ GSL ++L ++
Sbjct: 65 QEIDILRTLY--HEHIIKYKGCCED---QGEKSLQLVMEYVPLGSLRDYL-----PRHSI 114
Query: 229 NLLQRLSIAVDVASALDYLH--HYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPE 286
L Q L A + + YLH HY +H +L NVLLD + +GDFGLAK +PE
Sbjct: 115 GLAQLLLFAQQICEGMAYLHSQHY-----IHRNLAARNVLLDNDRLVKIGDFGLAKAVPE 169
Query: 287 ATNNF----------FNFQ---IAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ F + + EY + + DV+SFG+ L E T
Sbjct: 170 GHEYYRVREDGDSPVFWYAPECLKEY----KFYYASDVWSFGVTLYELLT 215
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 78/170 (45%), Gaps = 34/170 (20%)
Query: 169 ENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNL 228
+ +D+ R + H +++K C QG S LV E++ GSL ++L ++
Sbjct: 65 QEIDILRTLY--HEHIIKYKGCCED---QGEKSLQLVMEYVPLGSLRDYL-----PRHSI 114
Query: 229 NLLQRLSIAVDVASALDYLH--HYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPE 286
L Q L A + + YLH HY +H +L NVLLD + +GDFGLAK +PE
Sbjct: 115 GLAQLLLFAQQICEGMAYLHAQHY-----IHRNLAARNVLLDNDRLVKIGDFGLAKAVPE 169
Query: 287 ATNNF----------FNFQ---IAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ F + + EY + + DV+SFG+ L E T
Sbjct: 170 GHEYYRVREDGDSPVFWYAPECLKEY----KFYYASDVWSFGVTLYELLT 215
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 82/184 (44%), Gaps = 28/184 (15%)
Query: 203 ALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKP 262
A+V ++ SL LH + + L+ IA A +DYLH I+H DLK
Sbjct: 95 AIVTQWCEGSSLYHHLHASETKFEMKKLI---DIARQTARGMDYLH---AKSIIHRDLKS 148
Query: 263 SNVLLDGELTAHVGDFGLA--KFLPEATNNFFNFQIAEYGMGSEV---------STSGDV 311
+N+ L + T +GDFGLA K ++ F + M EV S DV
Sbjct: 149 NNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDV 208
Query: 312 YSFGILLLETFTGKRPTNEM--------FTGNLTLH---NFVKEALPERLAEIVDPVLLV 360
Y+FGI+L E TG+ P + + G +L + V+ P+R+ ++ L
Sbjct: 209 YAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKK 268
Query: 361 EREE 364
+R+E
Sbjct: 269 KRDE 272
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 77/170 (45%), Gaps = 34/170 (20%)
Query: 169 ENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNL 228
+ +D+ R + H +++K C G S LV E++ GSL ++L ++
Sbjct: 82 QEIDILRTLY--HEHIIKYKGCCEDA---GAASLQLVMEYVPLGSLRDYL-----PRHSI 131
Query: 229 NLLQRLSIAVDVASALDYLH--HYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPE 286
L Q L A + + YLH HY +H DL NVLLD + +GDFGLAK +PE
Sbjct: 132 GLAQLLLFAQQICEGMAYLHAQHY-----IHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186
Query: 287 ATNNF----------FNFQ---IAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ F + + EY + + DV+SFG+ L E T
Sbjct: 187 GHEXYRVREDGDSPVFWYAPECLKEY----KFYYASDVWSFGVTLYELLT 232
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 82/184 (44%), Gaps = 28/184 (15%)
Query: 203 ALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKP 262
A+V ++ SL LH + + L+ IA A +DYLH I+H DLK
Sbjct: 83 AIVTQWCEGSSLYHHLHASETKFEMKKLI---DIARQTARGMDYLH---AKSIIHRDLKS 136
Query: 263 SNVLLDGELTAHVGDFGLA--KFLPEATNNFFNFQIAEYGMGSEV---------STSGDV 311
+N+ L + T +GDFGLA K ++ F + M EV S DV
Sbjct: 137 NNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDV 196
Query: 312 YSFGILLLETFTGKRPTNEM--------FTGNLTLH---NFVKEALPERLAEIVDPVLLV 360
Y+FGI+L E TG+ P + + G +L + V+ P+R+ ++ L
Sbjct: 197 YAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKK 256
Query: 361 EREE 364
+R+E
Sbjct: 257 KRDE 260
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 84/184 (45%), Gaps = 28/184 (15%)
Query: 203 ALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKP 262
A+V ++ SL LH + + L+ IA A +DYLH I+H DLK
Sbjct: 95 AIVTQWCEGSSLYHHLHASETKFEMKKLI---DIARQTARGMDYLH---AKSIIHRDLKS 148
Query: 263 SNVLLDGELTAHVGDFGLA--KFLPEATNNFFNFQIAEYGMGSEV---------STSGDV 311
+N+ L + T +GDFGLA K ++ F + M EV S DV
Sbjct: 149 NNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDV 208
Query: 312 YSFGILLLETFTGKRPTN---------EMF-TGNLTLH-NFVKEALPERLAEIVDPVLLV 360
Y+FGI+L E TG+ P + EM G+L+ + V+ P+R+ ++ L
Sbjct: 209 YAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKK 268
Query: 361 EREE 364
+R+E
Sbjct: 269 KRDE 272
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 16/138 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
+V E+M NGSL+ +L R+ ++Q + + +AS + YL + VH DL
Sbjct: 111 IVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAAR 164
Query: 264 NVLLDGELTAHVGDFGLAKFL---PEATNNFFNFQIAEYGMGSEV------STSGDVYSF 314
N+L++ L V DFGL++ L PEA +I E +++ DV+S+
Sbjct: 165 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 224
Query: 315 GILLLETFT-GKRPTNEM 331
GI+L E + G+RP EM
Sbjct: 225 GIVLWEVMSYGERPYWEM 242
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 16/138 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
+V E+M NGSL+ +L R+ ++Q + + +AS + YL + VH DL
Sbjct: 123 IVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYL---SDMGFVHRDLAAR 176
Query: 264 NVLLDGELTAHVGDFGLAKFL---PEATNNFFNFQIAEYGMGSEV------STSGDVYSF 314
N+L++ L V DFGL++ L PEA +I E +++ DV+S+
Sbjct: 177 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 236
Query: 315 GILLLETFT-GKRPTNEM 331
GI+L E + G+RP EM
Sbjct: 237 GIVLWEVMSYGERPYWEM 254
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 16/138 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
+V E+M NGSL+ +L R+ ++Q + + +AS + YL + VH DL
Sbjct: 94 IVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAAR 147
Query: 264 NVLLDGELTAHVGDFGLAKFL---PEATNNFFNFQIAEYGMGSEV------STSGDVYSF 314
N+L++ L V DFGL++ L PEA +I E +++ DV+S+
Sbjct: 148 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 207
Query: 315 GILLLETFT-GKRPTNEM 331
GI+L E + G+RP EM
Sbjct: 208 GIVLWEVMSYGERPYWEM 225
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 80/176 (45%), Gaps = 18/176 (10%)
Query: 164 SLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSE----ALVYEFMVNGSLEEWLH 219
+++ I +S +FI ++ ++ V G E LV+EFM +G L ++L
Sbjct: 35 AIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLR 94
Query: 220 PNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFG 279
R LL + +DV + YL C ++H DL N L+ V DFG
Sbjct: 95 TQRGLFAAETLL---GMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFG 148
Query: 280 LAKFLPE-----ATNNFFNFQIA--EYGMGSEVSTSGDVYSFGILLLETFT-GKRP 327
+ +F+ + +T F + A E S S+ DV+SFG+L+ E F+ GK P
Sbjct: 149 MTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 204
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 99/217 (45%), Gaps = 30/217 (13%)
Query: 139 GSCIRLEQLVMNGNFF-----RGNIPSSLSSLRGIENLDL-----SRNNFIRHRNLVKII 188
SCI++E+++ G F R +P I+ L + R +F+ +++
Sbjct: 42 ASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQF 101
Query: 189 TSCASVDFQGNDSEA----LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASAL 244
V +G + +V EFM NG+L+ +L R+ ++Q + + +A+ +
Sbjct: 102 DHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFL---RKHDGQFTVIQLVGMLRGIAAGM 158
Query: 245 DYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL---PEATNNFFNFQIAEYGM 301
YL + VH DL N+L++ L V DFGL++ + PEA +I
Sbjct: 159 RYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWT 215
Query: 302 GSEV------STSGDVYSFGILLLETFT-GKRPTNEM 331
E +++ DV+S+GI++ E + G+RP +M
Sbjct: 216 APEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 252
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 16/138 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
+V E+M NGSL+ +L R+ ++Q + + +AS + YL + VH DL
Sbjct: 123 IVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAAR 176
Query: 264 NVLLDGELTAHVGDFGLAKFL---PEATNNFFNFQIAEYGMGSEV------STSGDVYSF 314
N+L++ L V DFGL++ L PEA +I E +++ DV+S+
Sbjct: 177 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 236
Query: 315 GILLLETFT-GKRPTNEM 331
GI+L E + G+RP EM
Sbjct: 237 GIVLWEVMSYGERPYWEM 254
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 16/138 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
+V E+M NGSL+ +L R+ ++Q + + +AS + YL + VH DL
Sbjct: 121 IVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAAR 174
Query: 264 NVLLDGELTAHVGDFGLAKFL---PEATNNFFNFQIAEYGMGSEV------STSGDVYSF 314
N+L++ L V DFGL++ L PEA +I E +++ DV+S+
Sbjct: 175 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 234
Query: 315 GILLLETFT-GKRPTNEM 331
GI+L E + G+RP EM
Sbjct: 235 GIVLWEVMSYGERPYWEM 252
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 16/138 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
+V E+M NGSL+ +L R+ ++Q + + +AS + YL + VH DL
Sbjct: 123 IVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAAR 176
Query: 264 NVLLDGELTAHVGDFGLAKFL---PEATNNFFNFQIAEYGMGSEV------STSGDVYSF 314
N+L++ L V DFGL++ L PEA +I E +++ DV+S+
Sbjct: 177 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 236
Query: 315 GILLLETFT-GKRPTNEM 331
GI+L E + G+RP EM
Sbjct: 237 GIVLWEVMSYGERPYWEM 254
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 16/138 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
+V E+M NGSL+ +L R+ ++Q + + +AS + YL + VH DL
Sbjct: 123 IVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAAR 176
Query: 264 NVLLDGELTAHVGDFGLAKFL---PEATNNFFNFQIAEYGMGSEV------STSGDVYSF 314
N+L++ L V DFGL++ L PEA +I E +++ DV+S+
Sbjct: 177 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 236
Query: 315 GILLLETFT-GKRPTNEM 331
GI+L E + G+RP EM
Sbjct: 237 GIVLWEVMSYGERPYWEM 254
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 80/176 (45%), Gaps = 18/176 (10%)
Query: 164 SLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSE----ALVYEFMVNGSLEEWLH 219
+++ I +S +FI ++ ++ V G E LV+EFM +G L ++L
Sbjct: 33 AIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLR 92
Query: 220 PNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFG 279
R LL + +DV + YL C ++H DL N L+ V DFG
Sbjct: 93 TQRGLFAAETLL---GMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFG 146
Query: 280 LAKFLPE-----ATNNFFNFQIA--EYGMGSEVSTSGDVYSFGILLLETFT-GKRP 327
+ +F+ + +T F + A E S S+ DV+SFG+L+ E F+ GK P
Sbjct: 147 MTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 202
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 80/176 (45%), Gaps = 18/176 (10%)
Query: 164 SLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSE----ALVYEFMVNGSLEEWLH 219
+++ I +S +FI ++ ++ V G E LV+EFM +G L ++L
Sbjct: 38 AIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLR 97
Query: 220 PNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFG 279
R LL + +DV + YL C ++H DL N L+ V DFG
Sbjct: 98 TQRGLFAAETLL---GMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFG 151
Query: 280 LAKFLPE-----ATNNFFNFQIA--EYGMGSEVSTSGDVYSFGILLLETFT-GKRP 327
+ +F+ + +T F + A E S S+ DV+SFG+L+ E F+ GK P
Sbjct: 152 MTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 207
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 16/138 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
+V E+M NGSL+ +L R+ ++Q + + +AS + YL + VH DL
Sbjct: 123 IVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAAR 176
Query: 264 NVLLDGELTAHVGDFGLAKFL---PEATNNFFNFQIAEYGMGSEV------STSGDVYSF 314
N+L++ L V DFGL++ L PEA +I E +++ DV+S+
Sbjct: 177 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 236
Query: 315 GILLLETFT-GKRPTNEM 331
GI+L E + G+RP EM
Sbjct: 237 GIVLWEVMSYGERPYWEM 254
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 78/174 (44%), Gaps = 24/174 (13%)
Query: 168 IENLDLSRNNF--IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREAL 225
IEN+ F ++H N++ + C + LV EF G L L R
Sbjct: 50 IENVRQEAKLFAMLKHPNIIALRGVCLK-----EPNLCLVMEFARGGPLNRVLSGKRIPP 104
Query: 226 KNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLL-----DGELT---AHVGD 277
L ++ AV +A ++YLH PI+H DLK SN+L+ +G+L+ + D
Sbjct: 105 DIL-----VNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159
Query: 278 FGLAKFLPEATN----NFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
FGLA+ T + + E S S DV+S+G+LL E TG+ P
Sbjct: 160 FGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 16/138 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
+V E+M NGSL+ +L R+ ++Q + + +AS + YL + VH DL
Sbjct: 123 IVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAAR 176
Query: 264 NVLLDGELTAHVGDFGLAKFL---PEATNNFFNFQIAEYGMGSEV------STSGDVYSF 314
N+L++ L V DFGL + L PEA +I E +++ DV+S+
Sbjct: 177 NILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 236
Query: 315 GILLLETFT-GKRPTNEM 331
GI+L E + G+RP EM
Sbjct: 237 GIVLWEVMSYGERPYWEM 254
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 102/220 (46%), Gaps = 36/220 (16%)
Query: 140 SCIRLEQLVMNGNFFRGNIPSSLSSLRGIENL------------DLSRNNFIRHRNLVKI 187
SC+++EQ++ G F G + S L G + + R +F+ +++
Sbjct: 7 SCVKIEQVIGAGEF--GEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQ 64
Query: 188 ITSCASVDFQGNDSEA----LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASA 243
+ +G +++ ++ EFM NGSL+ +L R+ ++Q + + +A+
Sbjct: 65 FDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL---RQNDGQFTVIQLVGMLRGIAAG 121
Query: 244 LDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNN-----------FF 292
+ YL + VH L N+L++ L V DFGL++FL + T++
Sbjct: 122 MKYL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPI 178
Query: 293 NFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNEM 331
+ E + +++ DV+S+GI++ E + G+RP +M
Sbjct: 179 RWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 218
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 68/156 (43%), Gaps = 24/156 (15%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
+ H ++VK C QG S LV E++ GSL ++L + L Q L A
Sbjct: 68 LYHEHIVKYKGCCED---QGEKSVQLVMEYVPLGSLRDYL-----PRHCVGLAQLLLFAQ 119
Query: 239 DVASALDYLH--HYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF----- 291
+ + YLH HY +H L NVLLD + +GDFGLAK +PE +
Sbjct: 120 QICEGMAYLHAQHY-----IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRED 174
Query: 292 ----FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ E + + DV+SFG+ L E T
Sbjct: 175 GDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 68/156 (43%), Gaps = 24/156 (15%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
+ H ++VK C QG S LV E++ GSL ++L + L Q L A
Sbjct: 67 LYHEHIVKYKGCCED---QGEKSVQLVMEYVPLGSLRDYL-----PRHCVGLAQLLLFAQ 118
Query: 239 DVASALDYLH--HYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF----- 291
+ + YLH HY +H L NVLLD + +GDFGLAK +PE +
Sbjct: 119 QICEGMAYLHAQHY-----IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRED 173
Query: 292 ----FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ E + + DV+SFG+ L E T
Sbjct: 174 GDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 100/219 (45%), Gaps = 34/219 (15%)
Query: 139 GSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLS------------RNNFIRHRNLVK 186
SCI +E+++ G F G + S L G L ++ R +F+ +++
Sbjct: 21 ASCITIERVIGAGEF--GEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMG 78
Query: 187 IITSCASVDFQGNDSEA----LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVAS 242
+ +G +++ +V E+M NGSL+ +L N ++Q + + +++
Sbjct: 79 QFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKND---GQFTVIQLVGMLRGISA 135
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL---PEATNNFFNFQIAEY 299
+ YL + VH DL N+L++ L V DFGL++ L PEA +I
Sbjct: 136 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 192
Query: 300 GMGSEV------STSGDVYSFGILLLETFT-GKRPTNEM 331
E +++ DV+S+GI++ E + G+RP EM
Sbjct: 193 WTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEM 231
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 22/157 (14%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
IRH LV++ + + +V E+M GSL ++L E K L L Q + +A
Sbjct: 70 IRHEKLVQLYAVVS------EEPIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAA 121
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAE 298
+AS + Y+ VH DL+ +N+L+ L V DFGLA+ + + N + Q A+
Sbjct: 122 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTARQGAK 176
Query: 299 Y---------GMGSEVSTSGDVYSFGILLLETFTGKR 326
+ + + DV+SFGILL E T R
Sbjct: 177 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 104/244 (42%), Gaps = 41/244 (16%)
Query: 111 PSNFGILKNLGAID---ISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRG 167
P + LK LG + K GQ +I +++ G S+S
Sbjct: 7 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAI-------KMIKEG---------SMSEDEF 50
Query: 168 IENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKN 227
IE + N + H LV++ C ++ E+M NG L +L R +
Sbjct: 51 IEEAKVMMN--LSHEKLVQLYGVCTK-----QRPIFIITEYMANGCLLNYLREMRHRFQT 103
Query: 228 LNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL--P 285
LL+ + DV A++YL +H DL N L++ + V DFGL++++
Sbjct: 104 QQLLE---MCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 157
Query: 286 EATNNF-----FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLTLH 339
E T++ + E M S+ S+ D+++FG+L+ E ++ GK P E FT + T
Sbjct: 158 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY-ERFTNSETAE 216
Query: 340 NFVK 343
+ +
Sbjct: 217 HIAQ 220
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 104/244 (42%), Gaps = 41/244 (16%)
Query: 111 PSNFGILKNLGAID---ISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRG 167
P + LK LG + K GQ +I +++ G S+S
Sbjct: 8 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAI-------KMIKEG---------SMSEDEF 51
Query: 168 IENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKN 227
IE + N + H LV++ C ++ E+M NG L +L R +
Sbjct: 52 IEEAKVMMN--LSHEKLVQLYGVCTK-----QRPIFIITEYMANGCLLNYLREMRHRFQT 104
Query: 228 LNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL--P 285
LL+ + DV A++YL +H DL N L++ + V DFGL++++
Sbjct: 105 QQLLE---MCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 158
Query: 286 EATNNF-----FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLTLH 339
E T++ + E M S+ S+ D+++FG+L+ E ++ GK P E FT + T
Sbjct: 159 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY-ERFTNSETAE 217
Query: 340 NFVK 343
+ +
Sbjct: 218 HIAQ 221
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 80/176 (45%), Gaps = 18/176 (10%)
Query: 164 SLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSE----ALVYEFMVNGSLEEWLH 219
+++ I +S +FI ++ ++ V G E LV+EFM +G L ++L
Sbjct: 35 AIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLR 94
Query: 220 PNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFG 279
R LL + +DV + YL E ++H DL N L+ V DFG
Sbjct: 95 TQRGLFAAETLL---GMCLDVCEGMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFG 148
Query: 280 LAKFLPE-----ATNNFFNFQIA--EYGMGSEVSTSGDVYSFGILLLETFT-GKRP 327
+ +F+ + +T F + A E S S+ DV+SFG+L+ E F+ GK P
Sbjct: 149 MTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 204
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 104/244 (42%), Gaps = 41/244 (16%)
Query: 111 PSNFGILKNLGAID---ISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRG 167
P + LK LG + K GQ +I +++ G S+S
Sbjct: 14 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAI-------KMIKEG---------SMSEDEF 57
Query: 168 IENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKN 227
IE + N + H LV++ C ++ E+M NG L +L R +
Sbjct: 58 IEEAKVMMN--LSHEKLVQLYGVCTK-----QRPIFIITEYMANGCLLNYLREMRHRFQT 110
Query: 228 LNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL--P 285
LL+ + DV A++YL +H DL N L++ + V DFGL++++
Sbjct: 111 QQLLE---MCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 164
Query: 286 EATNNF-----FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLTLH 339
E T++ + E M S+ S+ D+++FG+L+ E ++ GK P E FT + T
Sbjct: 165 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY-ERFTNSETAE 223
Query: 340 NFVK 343
+ +
Sbjct: 224 HIAQ 227
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 111 PSNFGILKNLGAID---ISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRG 167
P + LK LG + K GQ +I +++ G S+S
Sbjct: 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAI-------KMIKEG---------SMSEDEF 66
Query: 168 IENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKN 227
IE + N + H LV++ C ++ E+M NG L +L RE
Sbjct: 67 IEEAKVMMN--LSHEKLVQLYGVCTK-----QRPIFIITEYMANGCLLNYL---REMRHR 116
Query: 228 LNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL--P 285
Q L + DV A++YL +H DL N L++ + V DFGL++++
Sbjct: 117 FQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 173
Query: 286 EATNNF-----FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLTLH 339
E T++ + E M S+ S+ D+++FG+L+ E ++ GK P E FT + T
Sbjct: 174 EETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY-ERFTNSETAE 232
Query: 340 NFVK 343
+ +
Sbjct: 233 HIAQ 236
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 104/244 (42%), Gaps = 41/244 (16%)
Query: 111 PSNFGILKNLGAID---ISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRG 167
P + LK LG + K GQ +I +++ G S+S
Sbjct: 3 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAI-------KMIKEG---------SMSEDEF 46
Query: 168 IENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKN 227
IE + N + H LV++ C ++ E+M NG L +L R +
Sbjct: 47 IEEAKVMMN--LSHEKLVQLYGVCTK-----QRPIFIITEYMANGCLLNYLREMRHRFQT 99
Query: 228 LNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL--P 285
LL+ + DV A++YL +H DL N L++ + V DFGL++++
Sbjct: 100 QQLLE---MCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 153
Query: 286 EATNNF-----FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLTLH 339
E T++ + E M S+ S+ D+++FG+L+ E ++ GK P E FT + T
Sbjct: 154 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY-ERFTNSETAE 212
Query: 340 NFVK 343
+ +
Sbjct: 213 HIAQ 216
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 18/155 (11%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
+RH LV++ + + +V E+M GSL ++L E K L L Q + +A
Sbjct: 60 LRHEKLVQLYAVVS------EEPIXIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAA 111
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP-------EATNNF 291
+AS + Y+ VH DL+ +N+L+ L V DFGLA+ + +
Sbjct: 112 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP 168
Query: 292 FNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKR 326
+ E + + DV+SFGILL E T R
Sbjct: 169 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 203
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 111 PSNFGILKNLGAID---ISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRG 167
P + LK LG + K GQ +I +++ G S+S
Sbjct: 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAI-------KMIKEG---------SMSEDEF 66
Query: 168 IENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKN 227
IE + N + H LV++ C ++ E+M NG L +L RE
Sbjct: 67 IEEAKVMMN--LSHEKLVQLYGVCTK-----QRPIFIITEYMANGCLLNYL---REMRHR 116
Query: 228 LNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL--P 285
Q L + DV A++YL +H DL N L++ + V DFGL++++
Sbjct: 117 FQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 173
Query: 286 EATNNF-----FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLTLH 339
E T++ + E M S+ S+ D+++FG+L+ E ++ GK P E FT + T
Sbjct: 174 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY-ERFTNSETAE 232
Query: 340 NFVK 343
+ +
Sbjct: 233 HIAQ 236
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 104/244 (42%), Gaps = 41/244 (16%)
Query: 111 PSNFGILKNLGAID---ISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRG 167
P + LK LG + K GQ +I +++ G S+S
Sbjct: 8 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAI-------KMIKEG---------SMSEDEF 51
Query: 168 IENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKN 227
IE + N + H LV++ C ++ E+M NG L +L R +
Sbjct: 52 IEEAKVMMN--LSHEKLVQLYGVCTK-----QRPIFIITEYMANGCLLNYLREMRHRFQT 104
Query: 228 LNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL--P 285
LL+ + DV A++YL +H DL N L++ + V DFGL++++
Sbjct: 105 QQLLE---MCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 158
Query: 286 EATNNF-----FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLTLH 339
E T++ + E M S+ S+ D+++FG+L+ E ++ GK P E FT + T
Sbjct: 159 EYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY-ERFTNSETAE 217
Query: 340 NFVK 343
+ +
Sbjct: 218 HIAQ 221
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 19/207 (9%)
Query: 159 PSSLSSLRGIENLDLS---RNNFIRHRNLVKIITSCASVDFQG---NDSE-ALVYEFMVN 211
PS L R + +L++ RN IR ++ S V F G +D E ++ E M
Sbjct: 32 PSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDG 91
Query: 212 GSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGEL 271
GSL++ L + +L ++SIAV L YL + I+H D+KPSN+L++
Sbjct: 92 GSLDQVL--KKAGRIPEQILGKVSIAV--IKGLTYLRE--KHKIMHRDVKPSNILVNSRG 145
Query: 272 TAHVGDFGLA-KFLPEATNNFF---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
+ DFG++ + + E N F ++ E G+ S D++S G+ L+E G+ P
Sbjct: 146 EIKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
Query: 328 TNEMFTGNLTLHNFVKEALPERLAEIV 354
M L +++ P +L V
Sbjct: 206 RPPMAI--FELLDYIVNEPPPKLPSAV 230
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 22/157 (14%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
+RH LV++ + + +V E+M GSL ++L E K L L Q + +A
Sbjct: 63 LRHEKLVQLYAVVS------EEPIYIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAA 114
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAE 298
+AS + Y+ VH DL+ +N+L+ L V DFGLA+ + + N + Q A+
Sbjct: 115 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTARQGAK 169
Query: 299 Y---------GMGSEVSTSGDVYSFGILLLETFTGKR 326
+ + + DV+SFGILL E T R
Sbjct: 170 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 206
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 22/157 (14%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
+RH LV++ + + +V E+M GSL ++L E K L L Q + +A
Sbjct: 319 LRHEKLVQLYAVVS------EEPIYIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAA 370
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAE 298
+AS + Y+ VH DL+ +N+L+ L V DFGLA+ + + N + Q A+
Sbjct: 371 QIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTARQGAK 425
Query: 299 Y---------GMGSEVSTSGDVYSFGILLLETFTGKR 326
+ + + DV+SFGILL E T R
Sbjct: 426 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 462
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 18/155 (11%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
+RH LV++ + + +V E+M GSL ++L E K L L Q + +A
Sbjct: 70 LRHEKLVQLYAVVS------EEPIYIVIEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAA 121
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP-------EATNNF 291
+AS + Y+ VH DL+ +N+L+ L V DFGLA+ + +
Sbjct: 122 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP 178
Query: 292 FNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKR 326
+ E + + DV+SFGILL E T R
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 22/157 (14%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
+RH LV++ + + +V E+M GSL ++L E K L L Q + +A
Sbjct: 236 LRHEKLVQLYAVVS------EEPIYIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAA 287
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAE 298
+AS + Y+ VH DL+ +N+L+ L V DFGLA+ + + N + Q A+
Sbjct: 288 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTARQGAK 342
Query: 299 Y---------GMGSEVSTSGDVYSFGILLLETFTGKR 326
+ + + DV+SFGILL E T R
Sbjct: 343 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 22/157 (14%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
+RH LV++ + + +V E+M GSL ++L E K L L Q + +A
Sbjct: 70 LRHEKLVQLYAVVS------EEPIYIVIEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAA 121
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAE 298
+AS + Y+ VH DL+ +N+L+ L V DFGLA+ + + N + Q A+
Sbjct: 122 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTARQGAK 176
Query: 299 Y---------GMGSEVSTSGDVYSFGILLLETFTGKR 326
+ + + DV+SFGILL E T R
Sbjct: 177 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 79/176 (44%), Gaps = 18/176 (10%)
Query: 164 SLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSE----ALVYEFMVNGSLEEWLH 219
+++ I +S +FI ++ ++ V G E LV EFM +G L ++L
Sbjct: 36 AIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLR 95
Query: 220 PNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFG 279
R LL + +DV + YL C ++H DL N L+ V DFG
Sbjct: 96 TQRGLFAAETLL---GMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFG 149
Query: 280 LAKFLPE-----ATNNFFNFQIA--EYGMGSEVSTSGDVYSFGILLLETFT-GKRP 327
+ +F+ + +T F + A E S S+ DV+SFG+L+ E F+ GK P
Sbjct: 150 MTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 205
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 16/138 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
+V E M NGSL+ +L R+ ++Q + + +AS + YL + VH DL
Sbjct: 94 IVTEXMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAAR 147
Query: 264 NVLLDGELTAHVGDFGLAKFL---PEATNNFFNFQIAEYGMGSEV------STSGDVYSF 314
N+L++ L V DFGL++ L PEA +I E +++ DV+S+
Sbjct: 148 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 207
Query: 315 GILLLETFT-GKRPTNEM 331
GI+L E + G+RP EM
Sbjct: 208 GIVLWEVMSYGERPYWEM 225
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 22/157 (14%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
+RH LV++ + + +V E+M GSL ++L E K L L Q + +A
Sbjct: 236 LRHEKLVQLYAVVS------EEPIYIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAA 287
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAE 298
+AS + Y+ VH DL+ +N+L+ L V DFGLA+ + + N + Q A+
Sbjct: 288 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTARQGAK 342
Query: 299 Y---------GMGSEVSTSGDVYSFGILLLETFTGKR 326
+ + + DV+SFGILL E T R
Sbjct: 343 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 16/138 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
+V E M NGSL+ +L R+ ++Q + + +AS + YL + VH DL
Sbjct: 123 IVTEXMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAAR 176
Query: 264 NVLLDGELTAHVGDFGLAKFL---PEATNNFFNFQIAEYGMGSEV------STSGDVYSF 314
N+L++ L V DFGL++ L PEA +I E +++ DV+S+
Sbjct: 177 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 236
Query: 315 GILLLETFT-GKRPTNEM 331
GI+L E + G+RP EM
Sbjct: 237 GIVLWEVMSYGERPYWEM 254
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 22/157 (14%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
+RH LV++ + + +V E+M GSL ++L E K L L Q + +A
Sbjct: 70 LRHEKLVQLYAVVS------EEPIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAA 121
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAE 298
+AS + Y+ VH DL+ +N+L+ L V DFGLA+ + + N + Q A+
Sbjct: 122 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTARQGAK 176
Query: 299 Y---------GMGSEVSTSGDVYSFGILLLETFTGKR 326
+ + + DV+SFGILL E T R
Sbjct: 177 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 16/138 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
+V E M NGSL+ +L R+ ++Q + + +AS + YL + VH DL
Sbjct: 123 IVTEXMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYL---SDMGAVHRDLAAR 176
Query: 264 NVLLDGELTAHVGDFGLAKFL---PEATNNFFNFQIAEYGMGSEV------STSGDVYSF 314
N+L++ L V DFGL++ L PEA +I E +++ DV+S+
Sbjct: 177 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 236
Query: 315 GILLLETFT-GKRPTNEM 331
GI+L E + G+RP EM
Sbjct: 237 GIVLWEVMSYGERPYWEM 254
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 29/188 (15%)
Query: 169 ENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEA----LVYEFMVNGSLEEWLH---PN 221
E + +R +F R L+ ++ V F G +E +V+E+M +G L +L P+
Sbjct: 81 EASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPD 140
Query: 222 REALKN--------LNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA 273
+ L L L Q L++A VA+ + YL VH DL N L+ L
Sbjct: 141 AKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVV 197
Query: 274 HVGDFGLAKFLPEATNNF---------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT- 323
+GDFG+++ + +T+ + + E + + +T DV+SFG++L E FT
Sbjct: 198 KIGDFGMSRDI-YSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTY 256
Query: 324 GKRPTNEM 331
GK+P ++
Sbjct: 257 GKQPWYQL 264
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 19/166 (11%)
Query: 173 LSRNNFIRHRNLVKIITSCASVDFQGNDSEALVY---EFMVNGSLEEWLHPNREALKNLN 229
+S F++ ++K + V SE +Y E+M GSL ++L E K L
Sbjct: 55 MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVCEYMSKGSLLDFL--KGEMGKYLR 112
Query: 230 LLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATN 289
L Q + +A +AS + Y+ VH DL+ +N+L+ L V DFGLA+ + + N
Sbjct: 113 LPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED--N 167
Query: 290 NFFNFQIAEY---------GMGSEVSTSGDVYSFGILLLETFTGKR 326
+ Q A++ + + DV+SFGILL E T R
Sbjct: 168 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 22/157 (14%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
+RH LV++ + + +V E+M GSL ++L E K L L Q + +A
Sbjct: 61 LRHEKLVQLYAVVS------EEPIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAA 112
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAE 298
+AS + Y+ VH DL+ +N+L+ L V DFGLA+ + + N + Q A+
Sbjct: 113 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTARQGAK 167
Query: 299 Y---------GMGSEVSTSGDVYSFGILLLETFTGKR 326
+ + + DV+SFGILL E T R
Sbjct: 168 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 204
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 22/157 (14%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
+RH LV++ + + +V E+M GSL ++L E K L L Q + +A
Sbjct: 59 LRHEKLVQLYAVVS------EEPIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAA 110
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAE 298
+AS + Y+ VH DL+ +N+L+ L V DFGLA+ + + N + Q A+
Sbjct: 111 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTARQGAK 165
Query: 299 Y---------GMGSEVSTSGDVYSFGILLLETFTGKR 326
+ + + DV+SFGILL E T R
Sbjct: 166 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 202
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
+RH NLV+++ V + +V E+M GSL ++L ++ + L + S+
Sbjct: 71 LRHSNLVQLL----GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL-- 124
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF---FNFQ 295
DV A++YL VH DL NVL+ + A V DFGL K + +
Sbjct: 125 DVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT 181
Query: 296 IAEYGMGSEVSTSGDVYSFGILLLETFT-GKRP 327
E + ST DV+SFGILL E ++ G+ P
Sbjct: 182 APEALREKKFSTKSDVWSFGILLWEIYSFGRVP 214
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 33/185 (17%)
Query: 174 SRNNFIRHRNLVKIITSCASVDFQGNDSEA----LVYEFMVNGSLEEWLH---PNREALK 226
+R +F R L+ ++ V F G +E +V+E+M +G L +L P+ + L
Sbjct: 63 ARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLA 122
Query: 227 N--------LNLLQRLSIAVDVASALDYLH--HYCETPIVHCDLKPSNVLLDGELTAHVG 276
L L Q L++A VA+ + YL H+ VH DL N L+ L +G
Sbjct: 123 GGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHF-----VHRDLATRNCLVGQGLVVKIG 177
Query: 277 DFGLAKFLPEATNNF---------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKR 326
DFG+++ + +T+ + + E + + +T DV+SFG++L E FT GK+
Sbjct: 178 DFGMSRDI-YSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ 236
Query: 327 PTNEM 331
P ++
Sbjct: 237 PWYQL 241
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 33/185 (17%)
Query: 174 SRNNFIRHRNLVKIITSCASVDFQGNDSEA----LVYEFMVNGSLEEWLH---PNREALK 226
+R +F R L+ ++ V F G +E +V+E+M +G L +L P+ + L
Sbjct: 57 ARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLA 116
Query: 227 N--------LNLLQRLSIAVDVASALDYLH--HYCETPIVHCDLKPSNVLLDGELTAHVG 276
L L Q L++A VA+ + YL H+ VH DL N L+ L +G
Sbjct: 117 GGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHF-----VHRDLATRNCLVGQGLVVKIG 171
Query: 277 DFGLAKFLPEATNNF---------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKR 326
DFG+++ + +T+ + + E + + +T DV+SFG++L E FT GK+
Sbjct: 172 DFGMSRDI-YSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ 230
Query: 327 PTNEM 331
P ++
Sbjct: 231 PWYQL 235
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 19/166 (11%)
Query: 173 LSRNNFIRHRNLVKIITSCASVDFQGNDSEALVY---EFMVNGSLEEWLHPNREALKNLN 229
+S F++ ++K + V SE +Y E+M GSL ++L E K L
Sbjct: 221 MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVGEYMSKGSLLDFL--KGETGKYLR 278
Query: 230 LLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATN 289
L Q + +A +AS + Y+ VH DL+ +N+L+ L V DFGLA+ + + N
Sbjct: 279 LPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED--N 333
Query: 290 NFFNFQIAEY---------GMGSEVSTSGDVYSFGILLLETFTGKR 326
+ Q A++ + + DV+SFGILL E T R
Sbjct: 334 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
+RH NLV+++ V + +V E+M GSL ++L ++ + L + S+
Sbjct: 56 LRHSNLVQLL----GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL-- 109
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF---FNFQ 295
DV A++YL VH DL NVL+ + A V DFGL K + +
Sbjct: 110 DVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT 166
Query: 296 IAEYGMGSEVSTSGDVYSFGILLLETFT-GKRP 327
E + ST DV+SFGILL E ++ G+ P
Sbjct: 167 APEALREKKFSTKSDVWSFGILLWEIYSFGRVP 199
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
+RH NLV+++ V + +V E+M GSL ++L ++ + L + S+
Sbjct: 243 LRHSNLVQLL----GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL-- 296
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF---FNFQ 295
DV A++YL VH DL NVL+ + A V DFGL K + +
Sbjct: 297 DVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT 353
Query: 296 IAEYGMGSEVSTSGDVYSFGILLLETFT-GKRP 327
E + ST DV+SFGILL E ++ G+ P
Sbjct: 354 APEALREKKFSTKSDVWSFGILLWEIYSFGRVP 386
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 25/165 (15%)
Query: 184 LVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASA 243
+V++I C + +S LV E G L ++L NR +K+ N+++ + V+
Sbjct: 432 IVRMIGICEA------ESWMLVMEMAELGPLNKYLQQNRH-VKDKNIIE---LVHQVSMG 481
Query: 244 LDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQ------IA 297
+ YL E+ VH DL NVLL + A + DFGL+K L A N++ Q +
Sbjct: 482 MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHGKWPVK 537
Query: 298 EYGMGS----EVSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLT 337
Y + S+ DV+SFG+L+ E F+ G++P M +T
Sbjct: 538 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 582
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 25/165 (15%)
Query: 184 LVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASA 243
+V++I C + +S LV E G L ++L NR +K+ N+++ + V+
Sbjct: 433 IVRMIGICEA------ESWMLVMEMAELGPLNKYLQQNRH-VKDKNIIE---LVHQVSMG 482
Query: 244 LDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQ------IA 297
+ YL E+ VH DL NVLL + A + DFGL+K L A N++ Q +
Sbjct: 483 MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHGKWPVK 538
Query: 298 EYGMGS----EVSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLT 337
Y + S+ DV+SFG+L+ E F+ G++P M +T
Sbjct: 539 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 583
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
+RH NLV+++ V + +V E+M GSL ++L ++ + L + S+
Sbjct: 62 LRHSNLVQLL----GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL-- 115
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF---FNFQ 295
DV A++YL VH DL NVL+ + A V DFGL K + +
Sbjct: 116 DVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT 172
Query: 296 IAEYGMGSEVSTSGDVYSFGILLLETFT-GKRP 327
E + ST DV+SFGILL E ++ G+ P
Sbjct: 173 APEALREAAFSTKSDVWSFGILLWEIYSFGRVP 205
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 25/165 (15%)
Query: 184 LVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASA 243
+V++I C + +S LV E G L ++L NR +K+ N+++ + V+
Sbjct: 80 IVRMIGICEA------ESWMLVMEMAELGPLNKYLQQNRH-VKDKNIIE---LVHQVSMG 129
Query: 244 LDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQ------IA 297
+ YL E+ VH DL NVLL + A + DFGL+K L A N++ Q +
Sbjct: 130 MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHGKWPVK 185
Query: 298 EYGMGS----EVSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLT 337
Y + S+ DV+SFG+L+ E F+ G++P M +T
Sbjct: 186 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 230
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 25/165 (15%)
Query: 184 LVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASA 243
+V++I C + +S LV E G L ++L NR +K+ N+++ + V+
Sbjct: 68 IVRMIGICEA------ESWMLVMEMAELGPLNKYLQQNRH-VKDKNIIE---LVHQVSMG 117
Query: 244 LDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQ------IA 297
+ YL E+ VH DL NVLL + A + DFGL+K L A N++ Q +
Sbjct: 118 MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHGKWPVK 173
Query: 298 EYGMGS----EVSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLT 337
Y + S+ DV+SFG+L+ E F+ G++P M +T
Sbjct: 174 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 218
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 25/165 (15%)
Query: 184 LVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASA 243
+V++I C + +S LV E G L ++L NR +K+ N+++ + V+
Sbjct: 88 IVRMIGICEA------ESWMLVMEMAELGPLNKYLQQNRH-VKDKNIIE---LVHQVSMG 137
Query: 244 LDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQ------IA 297
+ YL E+ VH DL NVLL + A + DFGL+K L A N++ Q +
Sbjct: 138 MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHGKWPVK 193
Query: 298 EYGMGS----EVSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLT 337
Y + S+ DV+SFG+L+ E F+ G++P M +T
Sbjct: 194 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 238
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 17/180 (9%)
Query: 159 PSSLSSLRGIENLDLS---RNNFIRHRNLVKIITSCASVDFQG---NDSE-ALVYEFMVN 211
PS L R + +L++ RN IR ++ S V F G +D E ++ E M
Sbjct: 56 PSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDG 115
Query: 212 GSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGEL 271
GSL++ L + +L ++SIAV L YL + I+H D+KPSN+L++
Sbjct: 116 GSLDQVL--KKAGRIPEQILGKVSIAV--IKGLTYLRE--KHKIMHRDVKPSNILVNSRG 169
Query: 272 TAHVGDFGLAKFLPEATNNFF----NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
+ DFG++ L ++ N F ++ E G+ S D++S G+ L+E G+ P
Sbjct: 170 EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 17/180 (9%)
Query: 159 PSSLSSLRGIENLDLS---RNNFIRHRNLVKIITSCASVDFQG---NDSE-ALVYEFMVN 211
PS L R + +L++ RN IR ++ S V F G +D E ++ E M
Sbjct: 48 PSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDG 107
Query: 212 GSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGEL 271
GSL++ L + +L ++SIAV L YL + I+H D+KPSN+L++
Sbjct: 108 GSLDQVL--KKAGRIPEQILGKVSIAV--IKGLTYLRE--KHKIMHRDVKPSNILVNSRG 161
Query: 272 TAHVGDFGLAKFLPEATNNFF----NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
+ DFG++ L ++ N F ++ E G+ S D++S G+ L+E G+ P
Sbjct: 162 EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 25/165 (15%)
Query: 184 LVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASA 243
+V++I C + +S LV E G L ++L NR +K+ N+++ + V+
Sbjct: 74 IVRMIGICEA------ESWMLVMEMAELGPLNKYLQQNRH-VKDKNIIE---LVHQVSMG 123
Query: 244 LDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQ------IA 297
+ YL E+ VH DL NVLL + A + DFGL+K L A N++ Q +
Sbjct: 124 MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHGKWPVK 179
Query: 298 EYGMGS----EVSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLT 337
Y + S+ DV+SFG+L+ E F+ G++P M +T
Sbjct: 180 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 224
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 25/165 (15%)
Query: 184 LVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASA 243
+V++I C + +S LV E G L ++L NR +K+ N+++ + V+
Sbjct: 70 IVRMIGICEA------ESWMLVMEMAELGPLNKYLQQNRH-VKDKNIIE---LVHQVSMG 119
Query: 244 LDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQ------IA 297
+ YL E+ VH DL NVLL + A + DFGL+K L A N++ Q +
Sbjct: 120 MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHGKWPVK 175
Query: 298 EYGMGS----EVSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLT 337
Y + S+ DV+SFG+L+ E F+ G++P M +T
Sbjct: 176 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 220
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 98/224 (43%), Gaps = 45/224 (20%)
Query: 119 NLGAIDISENKLSG-QIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNN 177
G + I E++L+G ++ I + ++ L + G R I+NL L
Sbjct: 23 TFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKI-----------KREIQNLKL---- 67
Query: 178 FIRHRNLVKIITSCAS-VDFQGNDSEALVYEFMVNGSLEEWL--HPNREALKNLNLLQRL 234
RH +++K+ ++ DF +V E++ G L +++ H E ++ L Q+
Sbjct: 68 -FRHPHIIKLYQVISTPTDF------FMVMEYVSGGELFDYICKHGRVEEMEARRLFQQ- 119
Query: 235 SIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNF 294
+ SA+DY H + +VH DLKP NVLLD + A + DFGL+ + + F
Sbjct: 120 -----ILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG--EFLRT 169
Query: 295 QIAEYGMGSEVSTSG--------DVYSFGILLLETFTGKRPTNE 330
+ SG D++S G++L G P ++
Sbjct: 170 SCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD 213
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 88/180 (48%), Gaps = 17/180 (9%)
Query: 159 PSSLSSLRGIENLDLS---RNNFIRHRNLVKIITSCASVDFQG---NDSE-ALVYEFMVN 211
PS L R + +L++ RN IR ++ S V F G +D E ++ E M
Sbjct: 39 PSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDG 98
Query: 212 GSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGEL 271
GSL++ L + + + L ++SIAV L YL + I+H D+KPSN+L++
Sbjct: 99 GSLDQVLKEAKRIPEEI--LGKVSIAV--LRGLAYLREKHQ--IMHRDVKPSNILVNSRG 152
Query: 272 TAHVGDFGLAKFLPEATNNFF----NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
+ DFG++ L ++ N F ++ E G+ S D++S G+ L+E G+ P
Sbjct: 153 EIKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 17/180 (9%)
Query: 159 PSSLSSLRGIENLDLS---RNNFIRHRNLVKIITSCASVDFQG---NDSE-ALVYEFMVN 211
PS L R + +L++ RN IR ++ S V F G +D E ++ E M
Sbjct: 29 PSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDG 88
Query: 212 GSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGEL 271
GSL++ L + +L ++SIAV L YL + I+H D+KPSN+L++
Sbjct: 89 GSLDQVL--KKAGRIPEQILGKVSIAV--IKGLTYLRE--KHKIMHRDVKPSNILVNSRG 142
Query: 272 TAHVGDFGLAKFLPEATNNFF----NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
+ DFG++ L ++ N F ++ E G+ S D++S G+ L+E G+ P
Sbjct: 143 EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 17/180 (9%)
Query: 159 PSSLSSLRGIENLDLS---RNNFIRHRNLVKIITSCASVDFQG---NDSE-ALVYEFMVN 211
PS L R + +L++ RN IR ++ S V F G +D E ++ E M
Sbjct: 91 PSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDG 150
Query: 212 GSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGEL 271
GSL++ L + +L ++SIAV L YL + I+H D+KPSN+L++
Sbjct: 151 GSLDQVL--KKAGRIPEQILGKVSIAV--IKGLTYLRE--KHKIMHRDVKPSNILVNSRG 204
Query: 272 TAHVGDFGLAKFLPEATNNFF----NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
+ DFG++ L ++ N F ++ E G+ S D++S G+ L+E G+ P
Sbjct: 205 EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 17/180 (9%)
Query: 159 PSSLSSLRGIENLDLS---RNNFIRHRNLVKIITSCASVDFQG---NDSE-ALVYEFMVN 211
PS L R + +L++ RN IR ++ S V F G +D E ++ E M
Sbjct: 29 PSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDG 88
Query: 212 GSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGEL 271
GSL++ L + +L ++SIAV L YL + I+H D+KPSN+L++
Sbjct: 89 GSLDQVL--KKAGRIPEQILGKVSIAV--IKGLTYLRE--KHKIMHRDVKPSNILVNSRG 142
Query: 272 TAHVGDFGLAKFLPEATNNFF----NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
+ DFG++ L ++ N F ++ E G+ S D++S G+ L+E G+ P
Sbjct: 143 EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 17/180 (9%)
Query: 159 PSSLSSLRGIENLDLS---RNNFIRHRNLVKIITSCASVDFQG---NDSE-ALVYEFMVN 211
PS L R + +L++ RN IR ++ S V F G +D E ++ E M
Sbjct: 29 PSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDG 88
Query: 212 GSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGEL 271
GSL++ L + +L ++SIAV L YL + I+H D+KPSN+L++
Sbjct: 89 GSLDQVL--KKAGRIPEQILGKVSIAV--IKGLTYLRE--KHKIMHRDVKPSNILVNSRG 142
Query: 272 TAHVGDFGLAKFLPEATNNFF----NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
+ DFG++ L ++ N F ++ E G+ S D++S G+ L+E G+ P
Sbjct: 143 EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 25/165 (15%)
Query: 184 LVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASA 243
+V++I C + +S LV E G L ++L NR +K+ N+++ + V+
Sbjct: 90 IVRMIGICEA------ESWMLVMEMAELGPLNKYLQQNRH-VKDKNIIE---LVHQVSMG 139
Query: 244 LDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQ------IA 297
+ YL E+ VH DL NVLL + A + DFGL+K L A N++ Q +
Sbjct: 140 MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHGKWPVK 195
Query: 298 EYGMGS----EVSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLT 337
Y + S+ DV+SFG+L+ E F+ G++P M +T
Sbjct: 196 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 240
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 25/165 (15%)
Query: 184 LVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASA 243
+V++I C + +S LV E G L ++L NR +K+ N+++ + V+
Sbjct: 90 IVRMIGICEA------ESWMLVMEMAELGPLNKYLQQNRH-VKDKNIIE---LVHQVSMG 139
Query: 244 LDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQ------IA 297
+ YL E+ VH DL NVLL + A + DFGL+K L A N++ Q +
Sbjct: 140 MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHGKWPVK 195
Query: 298 EYGMGS----EVSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLT 337
Y + S+ DV+SFG+L+ E F+ G++P M +T
Sbjct: 196 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 240
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 17/180 (9%)
Query: 159 PSSLSSLRGIENLDLS---RNNFIRHRNLVKIITSCASVDFQG---NDSE-ALVYEFMVN 211
PS L R + +L++ RN IR ++ S V F G +D E ++ E M
Sbjct: 29 PSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDG 88
Query: 212 GSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGEL 271
GSL++ L + +L ++SIAV L YL + I+H D+KPSN+L++
Sbjct: 89 GSLDQVL--KKAGRIPEQILGKVSIAV--IKGLTYLRE--KHKIMHRDVKPSNILVNSRG 142
Query: 272 TAHVGDFGLAKFLPEATNNFF----NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
+ DFG++ L ++ N F ++ E G+ S D++S G+ L+E G+ P
Sbjct: 143 EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 17/180 (9%)
Query: 159 PSSLSSLRGIENLDLS---RNNFIRHRNLVKIITSCASVDFQG---NDSE-ALVYEFMVN 211
PS L R + +L++ RN IR ++ S V F G +D E ++ E M
Sbjct: 29 PSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDG 88
Query: 212 GSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGEL 271
GSL++ L + +L ++SIAV L YL + I+H D+KPSN+L++
Sbjct: 89 GSLDQVL--KKAGRIPEQILGKVSIAV--IKGLTYLRE--KHKIMHRDVKPSNILVNSRG 142
Query: 272 TAHVGDFGLAKFLPEATNNFF----NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
+ DFG++ L ++ N F ++ E G+ S D++S G+ L+E G+ P
Sbjct: 143 EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 18/140 (12%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
++ EFM NG+L+ +L N ++Q + + +AS + YL E VH DL
Sbjct: 92 ILTEFMENGALDSFLRLND---GQFTVIQLVGMLRGIASGMRYL---AEMSYVHRDLAAR 145
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNN-----------FFNFQIAEYGMGSEVSTSGDVY 312
N+L++ L V DFGL++FL E +++ + E + +++ D +
Sbjct: 146 NILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAW 205
Query: 313 SFGILLLETFT-GKRPTNEM 331
S+GI++ E + G+RP +M
Sbjct: 206 SYGIVMWEVMSFGERPYWDM 225
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 18/140 (12%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
++ EFM NG+L+ +L N ++Q + + +AS + YL E VH DL
Sbjct: 94 ILTEFMENGALDSFLRLND---GQFTVIQLVGMLRGIASGMRYL---AEMSYVHRDLAAR 147
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNN-----------FFNFQIAEYGMGSEVSTSGDVY 312
N+L++ L V DFGL++FL E +++ + E + +++ D +
Sbjct: 148 NILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAW 207
Query: 313 SFGILLLETFT-GKRPTNEM 331
S+GI++ E + G+RP +M
Sbjct: 208 SYGIVMWEVMSFGERPYWDM 227
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 73/157 (46%), Gaps = 22/157 (14%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
+RH LV++ + + +V E+M GSL ++L E K L L Q + +A
Sbjct: 70 LRHEKLVQLYAVVS------EEPIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAA 121
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAE 298
+AS + Y+ VH DL +N+L+ L V DFGLA+ + + N + Q A+
Sbjct: 122 QIASGMAYVER---MNYVHRDLAAANILVGENLVCKVADFGLARLIED--NEYTARQGAK 176
Query: 299 Y---------GMGSEVSTSGDVYSFGILLLETFTGKR 326
+ + + DV+SFGILL E T R
Sbjct: 177 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 98/224 (43%), Gaps = 45/224 (20%)
Query: 119 NLGAIDISENKLSG-QIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNN 177
G + I E++L+G ++ I + ++ L + G R I+NL L
Sbjct: 23 TFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKI-----------KREIQNLKL---- 67
Query: 178 FIRHRNLVKIITSCAS-VDFQGNDSEALVYEFMVNGSLEEWL--HPNREALKNLNLLQRL 234
RH +++K+ ++ DF +V E++ G L +++ H E ++ L Q+
Sbjct: 68 -FRHPHIIKLYQVISTPTDF------FMVMEYVSGGELFDYICKHGRVEEMEARRLFQQ- 119
Query: 235 SIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNF 294
+ SA+DY H + +VH DLKP NVLLD + A + DFGL+ + + F
Sbjct: 120 -----ILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG--EFLRD 169
Query: 295 QIAEYGMGSEVSTSG--------DVYSFGILLLETFTGKRPTNE 330
+ SG D++S G++L G P ++
Sbjct: 170 SCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD 213
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 49/96 (51%), Gaps = 10/96 (10%)
Query: 237 AVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQI 296
A +V AL+YLH I++ DLKP N+LLD + DFG AK++P+ T
Sbjct: 112 AAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCG--T 166
Query: 297 AEYGMGSEVST-----SGDVYSFGILLLETFTGKRP 327
+Y VST S D +SFGIL+ E G P
Sbjct: 167 PDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 80/181 (44%), Gaps = 33/181 (18%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
+V E++ +L + +H + + + + D AL++ H + I+H D+KP+
Sbjct: 93 IVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPA 145
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNFF---------NFQIAEYGMGSEVSTSGDVYSF 314
N+L+ V DFG+A+ + ++ N+ + E G V DVYS
Sbjct: 146 NILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 315 GILLLETFTGKRPTNEMFTGNLTL---HNFVKEALPERLAEIVDPVLLVEREEGETSKAN 371
G +L E TG+ P FTG+ + + V+E DP+ R EG ++ +
Sbjct: 206 GCVLYEVLTGEPP----FTGDSPVSVAYQHVRE----------DPIPPSARHEGLSADLD 251
Query: 372 A 372
A
Sbjct: 252 A 252
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 29/180 (16%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWL----HPNREALKNLNLLQRL 234
+ H N+VK+ ++ +V EF+ G L L HP + ++K L
Sbjct: 80 LNHPNIVKLYGLM-------HNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVK-------L 125
Query: 235 SIAVDVASALDYLHHYCETPIVHCDLKPSNVLL-----DGELTAHVGDFGLAKFLPEATN 289
+ +D+A ++Y+ + PIVH DL+ N+ L + + A V DFGL++ + +
Sbjct: 126 RLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVS 184
Query: 290 NFF-NFQ-IAEYGMGSE---VSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKE 344
NFQ +A +G+E + D YSF ++L TG+ P +E G + N ++E
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE 244
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 66/138 (47%), Gaps = 16/138 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
+V E+M NGSL+ +L R ++Q + + V + + YL + VH DL
Sbjct: 127 IVTEYMENGSLDTFL---RTHDGQFTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAAR 180
Query: 264 NVLLDGELTAHVGDFGLAKFL---PEATNNFFNFQIAEYGMGSEV------STSGDVYSF 314
NVL+D L V DFGL++ L P+A +I E S++ DV+SF
Sbjct: 181 NVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSF 240
Query: 315 GILLLETFT-GKRPTNEM 331
G+++ E G+RP M
Sbjct: 241 GVVMWEVLAYGERPYWNM 258
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 22/157 (14%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
+RH LV++ + + +V E+M G L ++L E K L L Q + +A
Sbjct: 70 LRHEKLVQLYAVVS------EEPIYIVMEYMSKGCLLDFL--KGEMGKYLRLPQLVDMAA 121
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAE 298
+AS + Y+ VH DL+ +N+L+ L V DFGLA+ + + N + Q A+
Sbjct: 122 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTARQGAK 176
Query: 299 Y---------GMGSEVSTSGDVYSFGILLLETFTGKR 326
+ + + DV+SFGILL E T R
Sbjct: 177 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 22/157 (14%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
+RH LV++ + + +V E+M G L ++L E K L L Q + +A
Sbjct: 70 LRHEKLVQLYAVVS------EEPIYIVTEYMSKGCLLDFL--KGEMGKYLRLPQLVDMAA 121
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAE 298
+AS + Y+ VH DL+ +N+L+ L V DFGLA+ + + N + Q A+
Sbjct: 122 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTARQGAK 176
Query: 299 Y---------GMGSEVSTSGDVYSFGILLLETFTGKR 326
+ + + DV+SFGILL E T R
Sbjct: 177 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 22/157 (14%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
+RH LV++ + + +V E+M GSL ++L E K L L Q + ++
Sbjct: 67 LRHEKLVQLYAVVS------EEPIYIVTEYMNKGSLLDFL--KGETGKYLRLPQLVDMSA 118
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAE 298
+AS + Y+ VH DL+ +N+L+ L V DFGLA+ + + N + Q A+
Sbjct: 119 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTARQGAK 173
Query: 299 Y---------GMGSEVSTSGDVYSFGILLLETFTGKR 326
+ + + DV+SFGILL E T R
Sbjct: 174 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 210
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 66/138 (47%), Gaps = 16/138 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
+V E+M NGSL+ +L R ++Q + + V + + YL + VH DL
Sbjct: 127 IVTEYMENGSLDTFL---RTHDGQFTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAAR 180
Query: 264 NVLLDGELTAHVGDFGLAKFL---PEATNNFFNFQIAEYGMGSEV------STSGDVYSF 314
NVL+D L V DFGL++ L P+A +I E S++ DV+SF
Sbjct: 181 NVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSF 240
Query: 315 GILLLETFT-GKRPTNEM 331
G+++ E G+RP M
Sbjct: 241 GVVMWEVLAYGERPYWNM 258
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 21/164 (12%)
Query: 175 RNNFIRHRNLVKIITSCASVDFQG------NDSEALVYEFMVNGSLEEWLHPNREALKNL 228
+ +F R ++K + S V ++G S LV E++ +G L ++L +R L
Sbjct: 55 QRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDAS 114
Query: 229 NLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT 288
LL S + ++YL VH DL N+L++ E + DFGLAK LP
Sbjct: 115 RLLLYSS---QICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK 168
Query: 289 NNFFN--------FQIAEYGMGSEV-STSGDVYSFGILLLETFT 323
+ + F A + + S DV+SFG++L E FT
Sbjct: 169 DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 80/181 (44%), Gaps = 33/181 (18%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
+V E++ +L + +H + + + + D AL++ H + I+H D+KP+
Sbjct: 93 IVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPA 145
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNF---------FNFQIAEYGMGSEVSTSGDVYSF 314
N+++ V DFG+A+ + ++ N+ + E G V DVYS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 315 GILLLETFTGKRPTNEMFTGNLTL---HNFVKEALPERLAEIVDPVLLVEREEGETSKAN 371
G +L E TG+ P FTG+ + + V+E DP+ R EG ++ +
Sbjct: 206 GCVLYEVLTGEPP----FTGDSPVSVAYQHVRE----------DPIPPSARHEGLSADLD 251
Query: 372 A 372
A
Sbjct: 252 A 252
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 21/164 (12%)
Query: 175 RNNFIRHRNLVKIITSCASVDFQG------NDSEALVYEFMVNGSLEEWLHPNREALKNL 228
+ +F R ++K + S V ++G S LV E++ +G L ++L +R L
Sbjct: 68 QRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDAS 127
Query: 229 NLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT 288
LL S + ++YL VH DL N+L++ E + DFGLAK LP
Sbjct: 128 RLLLYSS---QICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK 181
Query: 289 NNFFN--------FQIAEYGMGSEV-STSGDVYSFGILLLETFT 323
+ + F A + + S DV+SFG++L E FT
Sbjct: 182 DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 19/175 (10%)
Query: 164 SLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVY---EFMVNGSLEEWLHP 220
+++ ++ ++S F++ ++K + V SE +Y E+M GSL ++L
Sbjct: 213 AIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFL-- 270
Query: 221 NREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGL 280
E K L L Q + +A +AS + Y+ VH DL+ +N+L+ L V DFGL
Sbjct: 271 KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGL 327
Query: 281 AKFLPEATNNFFNFQIAEY---------GMGSEVSTSGDVYSFGILLLETFTGKR 326
+ + + N + Q A++ + + DV+SFGILL E T R
Sbjct: 328 GRLIED--NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 380
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 70/155 (45%), Gaps = 18/155 (11%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
+RH LV++ + + +V E+M GSL ++L E K L L Q + ++
Sbjct: 67 LRHEKLVQLYAVVS------EEPIYIVTEYMNKGSLLDFL--KGETGKYLRLPQLVDMSA 118
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP-------EATNNF 291
+AS + Y+ VH DL+ +N+L+ L V DFGLA+ + +
Sbjct: 119 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFP 175
Query: 292 FNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKR 326
+ E + + DV+SFGILL E T R
Sbjct: 176 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 210
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 21/164 (12%)
Query: 175 RNNFIRHRNLVKIITSCASVDFQG------NDSEALVYEFMVNGSLEEWLHPNREALKNL 228
+ +F R ++K + S V ++G S LV E++ +G L ++L +R L
Sbjct: 56 QRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDAS 115
Query: 229 NLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT 288
LL S + ++YL VH DL N+L++ E + DFGLAK LP
Sbjct: 116 RLLLYSS---QICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK 169
Query: 289 NNFFN--------FQIAEYGMGSEV-STSGDVYSFGILLLETFT 323
+ + F A + + S DV+SFG++L E FT
Sbjct: 170 DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 80/181 (44%), Gaps = 33/181 (18%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
+V E++ +L + +H + + + + D AL++ H + I+H D+KP+
Sbjct: 93 IVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPA 145
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNF---------FNFQIAEYGMGSEVSTSGDVYSF 314
N+++ V DFG+A+ + ++ N+ + E G V DVYS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 315 GILLLETFTGKRPTNEMFTGNLTL---HNFVKEALPERLAEIVDPVLLVEREEGETSKAN 371
G +L E TG+ P FTG+ + + V+E DP+ R EG ++ +
Sbjct: 206 GCVLYEVLTGEPP----FTGDSPVSVAYQHVRE----------DPIPPSARHEGLSADLD 251
Query: 372 A 372
A
Sbjct: 252 A 252
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 80/181 (44%), Gaps = 33/181 (18%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
+V E++ +L + +H + + + + D AL++ H + I+H D+KP+
Sbjct: 110 IVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPA 162
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNF---------FNFQIAEYGMGSEVSTSGDVYSF 314
N+++ V DFG+A+ + ++ N+ + E G V DVYS
Sbjct: 163 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 222
Query: 315 GILLLETFTGKRPTNEMFTGNLTL---HNFVKEALPERLAEIVDPVLLVEREEGETSKAN 371
G +L E TG+ P FTG+ + + V+E DP+ R EG ++ +
Sbjct: 223 GCVLYEVLTGEPP----FTGDSPVSVAYQHVRE----------DPIPPSARHEGLSADLD 268
Query: 372 A 372
A
Sbjct: 269 A 269
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 80/181 (44%), Gaps = 33/181 (18%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
+V E++ +L + +H + + + + D AL++ H + I+H D+KP+
Sbjct: 93 IVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPA 145
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNF---------FNFQIAEYGMGSEVSTSGDVYSF 314
N+++ V DFG+A+ + ++ N+ + E G V DVYS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 315 GILLLETFTGKRPTNEMFTGNLTL---HNFVKEALPERLAEIVDPVLLVEREEGETSKAN 371
G +L E TG+ P FTG+ + + V+E DP+ R EG ++ +
Sbjct: 206 GCVLYEVLTGEPP----FTGDSPVSVAYQHVRE----------DPIPPSARHEGLSADLD 251
Query: 372 A 372
A
Sbjct: 252 A 252
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 25/165 (15%)
Query: 184 LVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASA 243
+V++I C + +S LV E G L ++L NR +K+ N+++ + V+
Sbjct: 74 IVRMIGICEA------ESWMLVMEMAELGPLNKYLQQNRH-VKDKNIIE---LVHQVSMG 123
Query: 244 LDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQ------IA 297
+ YL E+ VH DL NVLL + A + DFGL+K L A N + Q +
Sbjct: 124 MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENXYKAQTHGKWPVK 179
Query: 298 EYGMGS----EVSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLT 337
Y + S+ DV+SFG+L+ E F+ G++P M +T
Sbjct: 180 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 224
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 33/181 (18%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
+V E++ +L + +H + + + + D AL++ H + I+H D+KP+
Sbjct: 93 IVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPA 145
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNF---------FNFQIAEYGMGSEVSTSGDVYSF 314
N+++ V DFG+A+ + ++ N+ + E G V DVYS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 315 GILLLETFTGKRPTNEMFTG---NLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKAN 371
G +L E TG+ P FTG + + V+E DP+ R EG ++ +
Sbjct: 206 GCVLYEVLTGEPP----FTGDSPDSVAYQHVRE----------DPIPPSARHEGLSADLD 251
Query: 372 A 372
A
Sbjct: 252 A 252
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 22/155 (14%)
Query: 204 LVYEFMVNGSLEEWL----HPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259
+V EF+ G L L HP + ++K L + +D+A ++Y+ + PIVH D
Sbjct: 98 MVMEFVPCGDLYHRLLDKAHPIKWSVK-------LRLMLDIALGIEYMQNQ-NPPIVHRD 149
Query: 260 LKPSNVLL-----DGELTAHVGDFGLAKFLPEATNNFF-NFQ-IAEYGMGSE---VSTSG 309
L+ N+ L + + A V DFG ++ + + NFQ +A +G+E +
Sbjct: 150 LRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKA 209
Query: 310 DVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKE 344
D YSF ++L TG+ P +E G + N ++E
Sbjct: 210 DTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE 244
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 18/184 (9%)
Query: 153 FFRGNIPSSLSSLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVY---EFM 209
++ G+ ++ SL+ +S + F+ NL+K + V ++ +Y E+M
Sbjct: 33 YYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYM 89
Query: 210 VNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDG 269
NGSL ++L +N L L +A +A + ++ E +H DL+ +N+L+
Sbjct: 90 ENGSLVDFLKTPSGIKLTINKL--LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSD 144
Query: 270 ELTAHVGDFGLAKFLPEATNNF-------FNFQIAEYGMGSEVSTSGDVYSFGILLLETF 322
L+ + DFGLA+ + +A + E + DV+SFGILL E
Sbjct: 145 TLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204
Query: 323 TGKR 326
T R
Sbjct: 205 THGR 208
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 67/143 (46%), Gaps = 27/143 (18%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV------------DVASALDYLHHYC 251
L Y F G L L + L+ +L RLS V ++A ALD+LH
Sbjct: 91 LHYAFQTEGKLYLIL----DFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG 146
Query: 252 ETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNF-QIAEYGMGSEV----- 305
I++ DLKP N+LLD E + DFGL+K + ++F EY M EV
Sbjct: 147 ---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEY-MAPEVVNRRG 202
Query: 306 -STSGDVYSFGILLLETFTGKRP 327
+ S D +SFG+L+ E TG P
Sbjct: 203 HTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 18/178 (10%)
Query: 164 SLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEA----LVYEFMVNGSLEEWLH 219
+++ I+ +S + F + + ++ V F G S+ +V E++ NG L +L
Sbjct: 36 AVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYL- 94
Query: 220 PNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFG 279
R K L Q L + DV + +L + +H DL N L+D +L V DFG
Sbjct: 95 --RSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFG 149
Query: 280 LAKFLPE-------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTN 329
+ +++ + T + E + S+ DV++FGIL+ E F+ GK P +
Sbjct: 150 MTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYD 207
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 67/143 (46%), Gaps = 27/143 (18%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV------------DVASALDYLHHYC 251
L Y F G L L + L+ +L RLS V ++A ALD+LH
Sbjct: 91 LHYAFQTEGKLYLIL----DFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG 146
Query: 252 ETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNF-QIAEYGMGSEV----- 305
I++ DLKP N+LLD E + DFGL+K + ++F EY M EV
Sbjct: 147 ---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEY-MAPEVVNRRG 202
Query: 306 -STSGDVYSFGILLLETFTGKRP 327
+ S D +SFG+L+ E TG P
Sbjct: 203 HTQSADWWSFGVLMFEMLTGTLP 225
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 67/143 (46%), Gaps = 27/143 (18%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV------------DVASALDYLHHYC 251
L Y F G L L + L+ +L RLS V ++A ALD+LH
Sbjct: 92 LHYAFQTEGKLYLIL----DFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG 147
Query: 252 ETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNF-QIAEYGMGSEV----- 305
I++ DLKP N+LLD E + DFGL+K + ++F EY M EV
Sbjct: 148 ---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEY-MAPEVVNRRG 203
Query: 306 -STSGDVYSFGILLLETFTGKRP 327
+ S D +SFG+L+ E TG P
Sbjct: 204 HTQSADWWSFGVLMFEMLTGTLP 226
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 22/155 (14%)
Query: 204 LVYEFMVNGSLEEWL----HPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259
+V EF+ G L L HP + ++K L + +D+A ++Y+ + PIVH D
Sbjct: 98 MVMEFVPCGDLYHRLLDKAHPIKWSVK-------LRLMLDIALGIEYMQNQ-NPPIVHRD 149
Query: 260 LKPSNVLL-----DGELTAHVGDFGLAKFLPEATNNFF-NFQ-IAEYGMGSE---VSTSG 309
L+ N+ L + + A V DF L++ + + NFQ +A +G+E +
Sbjct: 150 LRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKA 209
Query: 310 DVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKE 344
D YSF ++L TG+ P +E G + N ++E
Sbjct: 210 DTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE 244
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 71/168 (42%), Gaps = 15/168 (8%)
Query: 173 LSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQ 232
L R H N+V+++ CA+ LV+E V+ L +L ++ L
Sbjct: 57 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEH-VDQDLRTYL--DKAPPPGLPAET 113
Query: 233 RLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF- 291
+ LD+LH C IVH DLKP N+L+ T + DFGLA+ F
Sbjct: 114 IKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFP 170
Query: 292 ----FNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGN 335
++ E + S +T D++S G + E F K +F GN
Sbjct: 171 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK----PLFCGN 214
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 22/186 (11%)
Query: 153 FFRGNIPSSLSSLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVY---EFM 209
++ G+ ++ SL+ +S + F+ NL+K + V ++ +Y E+M
Sbjct: 43 YYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYM 99
Query: 210 VNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDG 269
NGSL ++L +N L L +A +A + ++ E +H DL+ +N+L+
Sbjct: 100 ENGSLVDFLKTPSGIKLTINKL--LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSD 154
Query: 270 ELTAHVGDFGLAKFLPEATNNFFNFQIAEYGMGSEV---------STSGDVYSFGILLLE 320
L+ + DFGLA+ + + N + + A++ + + DV+SFGILL E
Sbjct: 155 TLSCKIADFGLARLIED--NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 212
Query: 321 TFTGKR 326
T R
Sbjct: 213 IVTHGR 218
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 22/186 (11%)
Query: 153 FFRGNIPSSLSSLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVY---EFM 209
++ G+ ++ SL+ +S + F+ NL+K + V ++ +Y E+M
Sbjct: 39 YYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYM 95
Query: 210 VNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDG 269
NGSL ++L +N L L +A +A + ++ E +H DL+ +N+L+
Sbjct: 96 ENGSLVDFLKTPSGIKLTINKL--LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSD 150
Query: 270 ELTAHVGDFGLAKFLPEATNNFFNFQIAEYGMGSEV---------STSGDVYSFGILLLE 320
L+ + DFGLA+ + + N + + A++ + + DV+SFGILL E
Sbjct: 151 TLSCKIADFGLARLIED--NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 208
Query: 321 TFTGKR 326
T R
Sbjct: 209 IVTHGR 214
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 27/183 (14%)
Query: 172 DLSRNNFIRHRNLVKIITSCASVDFQG----NDSEALVYEFMVNGSLEEWLH---PNREA 224
D +R +F R L+ + V F G D +V+E+M +G L ++L P+
Sbjct: 56 DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVL 115
Query: 225 LKN------LNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDF 278
+ L Q L IA +A+ + YL VH DL N L+ L +GDF
Sbjct: 116 MAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDF 172
Query: 279 GLAKFLPEATNNF---------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPT 328
G+++ + +T+ + + E M + +T DV+S G++L E FT GK+P
Sbjct: 173 GMSRDV-YSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPW 231
Query: 329 NEM 331
++
Sbjct: 232 YQL 234
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 22/186 (11%)
Query: 153 FFRGNIPSSLSSLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVY---EFM 209
++ G+ ++ SL+ +S + F+ NL+K + V ++ +Y E+M
Sbjct: 28 YYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYM 84
Query: 210 VNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDG 269
NGSL ++L +N L L +A +A + ++ E +H DL+ +N+L+
Sbjct: 85 ENGSLVDFLKTPSGIKLTINKL--LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSD 139
Query: 270 ELTAHVGDFGLAKFLPEATNNFFNFQIAEYGMGSEV---------STSGDVYSFGILLLE 320
L+ + DFGLA+ + + N + + A++ + + DV+SFGILL E
Sbjct: 140 TLSCKIADFGLARLIED--NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 197
Query: 321 TFTGKR 326
T R
Sbjct: 198 IVTHGR 203
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 72/164 (43%), Gaps = 21/164 (12%)
Query: 175 RNNFIRHRNLVKIITSCASVDFQG------NDSEALVYEFMVNGSLEEWLHPNREALKNL 228
+ +F R ++K + S V ++G LV E++ +G L ++L +R L
Sbjct: 52 QRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDAS 111
Query: 229 NLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP--- 285
LL S + ++YL VH DL N+L++ E + DFGLAK LP
Sbjct: 112 RLLLYSS---QICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK 165
Query: 286 ------EATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
E + + E + S DV+SFG++L E FT
Sbjct: 166 DXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 22/186 (11%)
Query: 153 FFRGNIPSSLSSLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVY---EFM 209
++ G+ ++ SL+ +S + F+ NL+K + V ++ +Y E+M
Sbjct: 38 YYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYM 94
Query: 210 VNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDG 269
NGSL ++L +N L L +A +A + ++ E +H DL+ +N+L+
Sbjct: 95 ENGSLVDFLKTPSGIKLTINKL--LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSD 149
Query: 270 ELTAHVGDFGLAKFLPEATNNFFNFQIAEYGMGSEV---------STSGDVYSFGILLLE 320
L+ + DFGLA+ + + N + + A++ + + DV+SFGILL E
Sbjct: 150 TLSCKIADFGLARLIED--NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 207
Query: 321 TFTGKR 326
T R
Sbjct: 208 IVTHGR 213
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 17/155 (10%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNR--EALKNLNLLQRLSIAV 238
H N+++++ C + QG ++ FM G L +L +R K++ L L V
Sbjct: 95 HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMV 154
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN----- 293
D+A ++YL + +H DL N +L ++T V DFGL+K + + +++
Sbjct: 155 DIALGMEYLSN---RNFLHRDLAARNCMLRDDMTVCVADFGLSKKI--YSGDYYRQGRIA 209
Query: 294 ----FQIAEYGMGSEVSTS-GDVYSFGILLLETFT 323
IA + V TS DV++FG+ + E T
Sbjct: 210 KMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 85/196 (43%), Gaps = 42/196 (21%)
Query: 153 FFRGNIPSSLSSLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVY---EFM 209
++ G+ ++ SL+ +S + F+ NL+K + V ++ +Y E+M
Sbjct: 39 YYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYM 95
Query: 210 VNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDG 269
NGSL ++L +N L L +A +A + ++ E +H DL+ +N+L+
Sbjct: 96 ENGSLVDFLKTPSGIKLTINKL--LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSD 150
Query: 270 ELTAHVGDFGLAKFL-------------------PEATNNFFNFQIAEYGMGSEVSTSGD 310
L+ + DFGLA+ + PEA N YG + D
Sbjct: 151 TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAIN---------YGT---FTIKSD 198
Query: 311 VYSFGILLLETFTGKR 326
V+SFGILL E T R
Sbjct: 199 VWSFGILLTEIVTHGR 214
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 85/196 (43%), Gaps = 42/196 (21%)
Query: 153 FFRGNIPSSLSSLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVY---EFM 209
++ G+ ++ SL+ +S + F+ NL+K + V ++ +Y E+M
Sbjct: 41 YYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYM 97
Query: 210 VNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDG 269
NGSL ++L +N L L +A +A + ++ E +H DL+ +N+L+
Sbjct: 98 ENGSLVDFLKTPSGIKLTINKL--LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSD 152
Query: 270 ELTAHVGDFGLAKFL-------------------PEATNNFFNFQIAEYGMGSEVSTSGD 310
L+ + DFGLA+ + PEA N YG + D
Sbjct: 153 TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAIN---------YGT---FTIKSD 200
Query: 311 VYSFGILLLETFTGKR 326
V+SFGILL E T R
Sbjct: 201 VWSFGILLTEIVTHGR 216
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 22/186 (11%)
Query: 153 FFRGNIPSSLSSLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVY---EFM 209
++ G+ ++ SL+ +S + F+ NL+K + V ++ +Y E+M
Sbjct: 33 YYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYM 89
Query: 210 VNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDG 269
NGSL ++L +N L L +A +A + ++ E +H DL+ +N+L+
Sbjct: 90 ENGSLVDFLKTPSGIKLTINKL--LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSD 144
Query: 270 ELTAHVGDFGLAKFLPEATNNFFNFQIAEYGMGSEV---------STSGDVYSFGILLLE 320
L+ + DFGLA+ + + N + + A++ + + DV+SFGILL E
Sbjct: 145 TLSCKIADFGLARLIED--NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 202
Query: 321 TFTGKR 326
T R
Sbjct: 203 IVTHGR 208
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 84/195 (43%), Gaps = 27/195 (13%)
Query: 150 NGNF-------FRGNIPSSLSSLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSE 202
NG F + GN ++ +L+ +S +F+ ++K + V SE
Sbjct: 19 NGQFGEVWMGTWNGNTKVAIKTLK---PGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 203 ALVY---EFMVNGSLEEWLHPNR-EALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258
+Y E+M GSL ++L ALK NL+ +A VA+ + Y+ +H
Sbjct: 76 EPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLV---DMAAQVAAGMAYIER---MNYIHR 129
Query: 259 DLKPSNVLLDGELTAHVGDFGLAKFLP-------EATNNFFNFQIAEYGMGSEVSTSGDV 311
DL+ +N+L+ L + DFGLA+ + + + E + + DV
Sbjct: 130 DLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 189
Query: 312 YSFGILLLETFTGKR 326
+SFGILL E T R
Sbjct: 190 WSFGILLTELVTKGR 204
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 85/196 (43%), Gaps = 42/196 (21%)
Query: 153 FFRGNIPSSLSSLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVY---EFM 209
++ G+ ++ SL+ +S + F+ NL+K + V ++ +Y E+M
Sbjct: 42 YYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYM 98
Query: 210 VNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDG 269
NGSL ++L +N L L +A +A + ++ E +H DL+ +N+L+
Sbjct: 99 ENGSLVDFLKTPSGIKLTINKL--LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSD 153
Query: 270 ELTAHVGDFGLAKFL-------------------PEATNNFFNFQIAEYGMGSEVSTSGD 310
L+ + DFGLA+ + PEA N YG + D
Sbjct: 154 TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAIN---------YGT---FTIKSD 201
Query: 311 VYSFGILLLETFTGKR 326
V+SFGILL E T R
Sbjct: 202 VWSFGILLTEIVTHGR 217
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 85/196 (43%), Gaps = 42/196 (21%)
Query: 153 FFRGNIPSSLSSLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVY---EFM 209
++ G+ ++ SL+ +S + F+ NL+K + V ++ +Y E+M
Sbjct: 33 YYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYM 89
Query: 210 VNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDG 269
NGSL ++L +N L L +A +A + ++ E +H DL+ +N+L+
Sbjct: 90 ENGSLVDFLKTPSGIKLTINKL--LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSD 144
Query: 270 ELTAHVGDFGLAKFL-------------------PEATNNFFNFQIAEYGMGSEVSTSGD 310
L+ + DFGLA+ + PEA N YG + D
Sbjct: 145 TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAIN---------YGT---FTIKSD 192
Query: 311 VYSFGILLLETFTGKR 326
V+SFGILL E T R
Sbjct: 193 VWSFGILLTEIVTHGR 208
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 85/196 (43%), Gaps = 42/196 (21%)
Query: 153 FFRGNIPSSLSSLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVY---EFM 209
++ G+ ++ SL+ +S + F+ NL+K + V ++ +Y E+M
Sbjct: 34 YYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYM 90
Query: 210 VNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDG 269
NGSL ++L +N L L +A +A + ++ E +H DL+ +N+L+
Sbjct: 91 ENGSLVDFLKTPSGIKLTINKL--LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSD 145
Query: 270 ELTAHVGDFGLAKFL-------------------PEATNNFFNFQIAEYGMGSEVSTSGD 310
L+ + DFGLA+ + PEA N YG + D
Sbjct: 146 TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAIN---------YGT---FTIKSD 193
Query: 311 VYSFGILLLETFTGKR 326
V+SFGILL E T R
Sbjct: 194 VWSFGILLTEIVTHGR 209
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 18/123 (14%)
Query: 207 EFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVL 266
EF G+LE+W+ R + L+ + L + + +DY+H ++H DLKPSN+
Sbjct: 114 EFCDKGTLEQWIEKRRG--EKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIF 168
Query: 267 LDGELTAHVGDFGLAKFLP--------EATNNFFN-FQIAEYGMGSEVSTSGDVYSFGIL 317
L +GDFGL L + T + + QI+ G EV D+Y+ G++
Sbjct: 169 LVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEV----DLYALGLI 224
Query: 318 LLE 320
L E
Sbjct: 225 LAE 227
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 85/196 (43%), Gaps = 42/196 (21%)
Query: 153 FFRGNIPSSLSSLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVY---EFM 209
++ G+ ++ SL+ +S + F+ NL+K + V ++ +Y E+M
Sbjct: 35 YYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYM 91
Query: 210 VNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDG 269
NGSL ++L +N L L +A +A + ++ E +H DL+ +N+L+
Sbjct: 92 ENGSLVDFLKTPSGIKLTINKL--LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSD 146
Query: 270 ELTAHVGDFGLAKFL-------------------PEATNNFFNFQIAEYGMGSEVSTSGD 310
L+ + DFGLA+ + PEA N YG + D
Sbjct: 147 TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAIN---------YGT---FTIKSD 194
Query: 311 VYSFGILLLETFTGKR 326
V+SFGILL E T R
Sbjct: 195 VWSFGILLTEIVTHGR 210
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 85/196 (43%), Gaps = 42/196 (21%)
Query: 153 FFRGNIPSSLSSLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVY---EFM 209
++ G+ ++ SL+ +S + F+ NL+K + V ++ +Y E+M
Sbjct: 33 YYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYM 89
Query: 210 VNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDG 269
NGSL ++L +N L L +A +A + ++ E +H DL+ +N+L+
Sbjct: 90 ENGSLVDFLKTPSGIKLTINKL--LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSD 144
Query: 270 ELTAHVGDFGLAKFL-------------------PEATNNFFNFQIAEYGMGSEVSTSGD 310
L+ + DFGLA+ + PEA N YG + D
Sbjct: 145 TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAIN---------YGT---FTIKSD 192
Query: 311 VYSFGILLLETFTGKR 326
V+SFGILL E T R
Sbjct: 193 VWSFGILLTEIVTHGR 208
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 21/170 (12%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N++ ++ C + S +V +M +G L ++ R N + + + V
Sbjct: 89 HPNVLSLLGIC----LRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQV 141
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPE----ATNNFFNFQI 296
A + YL VH DL N +LD + T V DFGLA+ + + + +N ++
Sbjct: 142 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKL 198
Query: 297 AEYGMGSE------VSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLTLH 339
M E +T DV+SFG+LL E T G P ++ T ++T++
Sbjct: 199 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 248
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 21/170 (12%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N++ ++ C + S +V +M +G L ++ R N + + + V
Sbjct: 109 HPNVLSLLGIC----LRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQV 161
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPE----ATNNFFNFQI 296
A + YL VH DL N +LD + T V DFGLA+ + + + +N ++
Sbjct: 162 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 218
Query: 297 AEYGMGSE------VSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLTLH 339
M E +T DV+SFG+LL E T G P ++ T ++T++
Sbjct: 219 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 268
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 39/180 (21%)
Query: 173 LSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLH----PNREALKNL 228
L R H N+V+++ CA+ LV+E V+ L +L P A
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEH-VDQDLRTYLDKAPPPGLPAETIK 123
Query: 229 NLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT 288
+L+++ LD+LH C IVH DLKP N+L+ T + DFGLA+
Sbjct: 124 DLMRQF------LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR------ 168
Query: 289 NNFFNFQIA-------------EYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGN 335
+++Q+A E + S +T D++S G + E F K +F GN
Sbjct: 169 --IYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK----PLFCGN 222
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 99/238 (41%), Gaps = 45/238 (18%)
Query: 113 NFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLD 172
+FG++ + ID ++N+ I +I S R+ ++ F R + +RG+
Sbjct: 33 HFGVVYHGEYIDQAQNR----IQCAIKSLSRITEMQQVEAFLREGL-----LMRGLN--- 80
Query: 173 LSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQ 232
H N++ +I + ++ +M +G L +++ R +N +
Sbjct: 81 --------HPNVLALI----GIMLPPEGLPHVLLPYMCHGDLLQFI---RSPQRNPTVKD 125
Query: 233 RLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF 292
+S + VA ++YL E VH DL N +LD T V DFGLA+ + ++
Sbjct: 126 LISFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDI--LDREYY 180
Query: 293 NFQIAEYG------------MGSEVSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLT 337
+ Q + +T DV+SFG+LL E T G P + +LT
Sbjct: 181 SVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLT 238
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 21/170 (12%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N++ ++ C + S +V +M +G L ++ R N + + + V
Sbjct: 108 HPNVLSLLGIC----LRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQV 160
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPE----ATNNFFNFQI 296
A + YL VH DL N +LD + T V DFGLA+ + + + +N ++
Sbjct: 161 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 217
Query: 297 AEYGMGSE------VSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLTLH 339
M E +T DV+SFG+LL E T G P ++ T ++T++
Sbjct: 218 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 267
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 21/170 (12%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N++ ++ C + S +V +M +G L ++ R N + + + V
Sbjct: 90 HPNVLSLLGIC----LRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQV 142
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPE----ATNNFFNFQI 296
A + YL VH DL N +LD + T V DFGLA+ + + + +N ++
Sbjct: 143 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 199
Query: 297 AEYGMGSE------VSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLTLH 339
M E +T DV+SFG+LL E T G P ++ T ++T++
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 249
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 21/170 (12%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N++ ++ C + S +V +M +G L ++ R N + + + V
Sbjct: 82 HPNVLSLLGIC----LRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQV 134
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPE----ATNNFFNFQI 296
A + YL VH DL N +LD + T V DFGLA+ + + + +N ++
Sbjct: 135 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 191
Query: 297 AEYGMGSE------VSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLTLH 339
M E +T DV+SFG+LL E T G P ++ T ++T++
Sbjct: 192 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 241
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 39/180 (21%)
Query: 173 LSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLH----PNREALKNL 228
L R H N+V+++ CA+ LV+E V+ L +L P A
Sbjct: 57 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEH-VDQDLRTYLDKAPPPGLPAETIK 115
Query: 229 NLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT 288
+L+++ LD+LH C IVH DLKP N+L+ T + DFGLA+
Sbjct: 116 DLMRQF------LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR------ 160
Query: 289 NNFFNFQIA-------------EYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGN 335
+++Q+A E + S +T D++S G + E F K +F GN
Sbjct: 161 --IYSYQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK----PLFCGN 214
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 29/166 (17%)
Query: 173 LSRNNFIRHRNLVKIITSCASVDFQGNDSEALVY---EFMVNGSLEEWLHPNREALKNLN 229
+S F+ N++K + V ++ +Y EFM GSL ++L + + + L
Sbjct: 219 MSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP 278
Query: 230 LLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKF------ 283
L + + +A + ++ + +H DL+ +N+L+ L + DFGLA+
Sbjct: 279 KL--IDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFPI 333
Query: 284 ---LPEATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKR 326
PEA NF +F I DV+SFGILL+E T R
Sbjct: 334 KWTAPEAI-NFGSFTI-----------KSDVWSFGILLMEIVTYGR 367
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 21/170 (12%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N++ ++ C + S +V +M +G L ++ R N + + + V
Sbjct: 88 HPNVLSLLGIC----LRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQV 140
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPE----ATNNFFNFQI 296
A + YL VH DL N +LD + T V DFGLA+ + + + +N ++
Sbjct: 141 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 197
Query: 297 AEYGMGSE------VSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLTLH 339
M E +T DV+SFG+LL E T G P ++ T ++T++
Sbjct: 198 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 247
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 39/180 (21%)
Query: 173 LSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLH----PNREALKNL 228
L R H N+V+++ CA+ LV+E V+ L +L P A
Sbjct: 57 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEH-VDQDLRTYLDKAPPPGLPAETIK 115
Query: 229 NLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT 288
+L+++ LD+LH C IVH DLKP N+L+ T + DFGLA+
Sbjct: 116 DLMRQF------LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR------ 160
Query: 289 NNFFNFQIA-------------EYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGN 335
+++Q+A E + S +T D++S G + E F K +F GN
Sbjct: 161 --IYSYQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK----PLFCGN 214
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 21/170 (12%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N++ ++ C + S +V +M +G L ++ R N + + + V
Sbjct: 87 HPNVLSLLGIC----LRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQV 139
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPE----ATNNFFNFQI 296
A + YL VH DL N +LD + T V DFGLA+ + + + +N ++
Sbjct: 140 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 196
Query: 297 AEYGMGSE------VSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLTLH 339
M E +T DV+SFG+LL E T G P ++ T ++T++
Sbjct: 197 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 246
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 21/170 (12%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N++ ++ C + S +V +M +G L ++ R N + + + V
Sbjct: 85 HPNVLSLLGIC----LRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQV 137
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPE----ATNNFFNFQI 296
A + YL VH DL N +LD + T V DFGLA+ + + + +N ++
Sbjct: 138 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 194
Query: 297 AEYGMGSE------VSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLTLH 339
M E +T DV+SFG+LL E T G P ++ T ++T++
Sbjct: 195 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 244
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 21/170 (12%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N++ ++ C + S +V +M +G L ++ R N + + + V
Sbjct: 90 HPNVLSLLGIC----LRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQV 142
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPE----ATNNFFNFQI 296
A + YL VH DL N +LD + T V DFGLA+ + + + +N ++
Sbjct: 143 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 199
Query: 297 AEYGMGSE------VSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLTLH 339
M E +T DV+SFG+LL E T G P ++ T ++T++
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 249
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 21/170 (12%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N++ ++ C + S +V +M +G L ++ R N + + + V
Sbjct: 89 HPNVLSLLGIC----LRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQV 141
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPE----ATNNFFNFQI 296
A + YL VH DL N +LD + T V DFGLA+ + + + +N ++
Sbjct: 142 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 198
Query: 297 AEYGMGSE------VSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLTLH 339
M E +T DV+SFG+LL E T G P ++ T ++T++
Sbjct: 199 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 248
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 66/143 (46%), Gaps = 27/143 (18%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV------------DVASALDYLHHYC 251
L Y F G L L + L+ +L RLS V ++A LD+LH
Sbjct: 95 LHYAFQTEGKLYLIL----DFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLG 150
Query: 252 ETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNF-QIAEYGMGSEV----- 305
I++ DLKP N+LLD E + DFGL+K + ++F EY M EV
Sbjct: 151 ---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEY-MAPEVVNRQG 206
Query: 306 -STSGDVYSFGILLLETFTGKRP 327
S S D +S+G+L+ E TG P
Sbjct: 207 HSHSADWWSYGVLMFEMLTGSLP 229
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 22/200 (11%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
++H N+V+ S S +G LV E +G+L+ +L R + + +L+ S
Sbjct: 82 LQHPNIVRFYDSWEST-VKGKKCIVLVTELXTSGTLKTYL--KRFKVXKIKVLR--SWCR 136
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGEL-TAHVGDFGLAKF----LPEATNNFFN 293
+ L +LH PI+H DLK N+ + G + +GD GLA +A
Sbjct: 137 QILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPE 195
Query: 294 FQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNE---------MFTGNLTLHNFVKE 344
F E + S DVY+FG LE T + P +E T + +F K
Sbjct: 196 FXAPE-XYEEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKV 254
Query: 345 ALPERLAEIVDPVLLVEREE 364
A+PE + EI++ + ++E
Sbjct: 255 AIPE-VKEIIEGCIRQNKDE 273
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 15/140 (10%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255
FQ + +V + ++ G L L N + L ++ ALDYL + I
Sbjct: 84 FQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL----FICELVMALDYLQN---QRI 136
Query: 256 VHCDLKPSNVLLDGELTAHVGDFGLAKFLPE--------ATNNFFNFQIAEYGMGSEVST 307
+H D+KP N+LLD H+ DF +A LP T + ++ G+ S
Sbjct: 137 IHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSF 196
Query: 308 SGDVYSFGILLLETFTGKRP 327
+ D +S G+ E G+RP
Sbjct: 197 AVDWWSLGVTAYELLRGRRP 216
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 27/173 (15%)
Query: 166 RGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREAL 225
R I+NL L R+ I L ++I++ + + +V E++ G L +++ N
Sbjct: 65 REIQNLKLFRHPHII--KLYQVISTPSDI--------FMVMEYVSGGELFDYICKN---- 110
Query: 226 KNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP 285
L+ + + + S +DY H + +VH DLKP NVLLD + A + DFGL+ +
Sbjct: 111 GRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM- 166
Query: 286 EATNNFFNFQIAEYGMGSEVSTSG--------DVYSFGILLLETFTGKRPTNE 330
+ F + SG D++S G++L G P ++
Sbjct: 167 -SDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDD 218
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 22/158 (13%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP----NREALKNLNLLQRL 234
++H N+V++ + + LV+EFM N L++++ N LNL++
Sbjct: 60 LKHENIVRLYDVIHT-----ENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYF 113
Query: 235 SIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF--- 291
+ L + H E I+H DLKP N+L++ +GDFGLA+ N F
Sbjct: 114 QW--QLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSE 168
Query: 292 ---FNFQIAEYGMGSEV-STSGDVYSFGILLLETFTGK 325
++ + MGS STS D++S G +L E TGK
Sbjct: 169 VVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 87/186 (46%), Gaps = 22/186 (11%)
Query: 153 FFRGNIPSSLSSLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVY---EFM 209
++ G+ ++ SL+ +S + F+ NL+K + V ++ +Y E+M
Sbjct: 29 YYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYM 85
Query: 210 VNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDG 269
NGSL ++L +N L L +A +A + ++ E +H +L+ +N+L+
Sbjct: 86 ENGSLVDFLKTPSGIKLTINKL--LDMAAQIAEGMAFIE---ERNYIHRNLRAANILVSD 140
Query: 270 ELTAHVGDFGLAKFLPEATNNFFNFQIAEYGMGSEV---------STSGDVYSFGILLLE 320
L+ + DFGLA+ + + N + + A++ + + DV+SFGILL E
Sbjct: 141 TLSCKIADFGLARLIED--NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 198
Query: 321 TFTGKR 326
T R
Sbjct: 199 IVTHGR 204
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 28/166 (16%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H +LV+++ C S Q LV + M +G L E++H +++ N+ L+ V +
Sbjct: 99 HPHLVRLLGVCLSPTIQ------LVTQLMPHGCLLEYVHEHKD---NIGSQLLLNWCVQI 149
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN------- 293
A + YL E +VH DL NVL+ + DFGLA+ L E +N
Sbjct: 150 AKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLL-EGDEKEYNADGGKMP 205
Query: 294 --FQIAEYGMGSEVSTSGDVYSFGILLLE--TFTGKR----PTNEM 331
+ E + + DV+S+G+ + E TF GK PT E+
Sbjct: 206 IKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREI 251
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 19/153 (12%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP-NREALKNLNLLQRLSIA 237
I+H NLV+++ C ++ EFM G+L ++L NR+ +N + L +A
Sbjct: 67 IKHPNLVQLLGVCTR-----EPPFYIITEFMTYGNLLDYLRECNRQ---EVNAVVLLYMA 118
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL-------PEATNN 290
++SA++YL + +H DL N L+ V DFGL++ + P
Sbjct: 119 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKF 175
Query: 291 FFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ E ++ S DV++FG+LL E T
Sbjct: 176 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 13/138 (9%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255
FQ ++ V E++ G L + ++ +L + A ++ L +LH I
Sbjct: 87 FQTKENLFFVMEYLNGGDLMYHI----QSCHKFDLSRATFYAAEIILGLQFLH---SKGI 139
Query: 256 VHCDLKPSNVLLDGELTAHVGDFGLAK--FLPEATNNFF----NFQIAEYGMGSEVSTSG 309
V+ DLK N+LLD + + DFG+ K L +A N F ++ E +G + + S
Sbjct: 140 VYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSV 199
Query: 310 DVYSFGILLLETFTGKRP 327
D +SFG+LL E G+ P
Sbjct: 200 DWWSFGVLLYEMLIGQSP 217
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 11/150 (7%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
++H N+V+ + N + +V E+ G L + + + L+ L +
Sbjct: 62 LKHPNIVRYYDRIID---RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 239 DVASALDYLHHYCE--TPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQI 296
+ AL H + ++H DLKP+NV LDG+ +GDFGLA+ L T+ F
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVG 178
Query: 297 AEYGMGSE------VSTSGDVYSFGILLLE 320
Y M E + D++S G LL E
Sbjct: 179 TPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 19/153 (12%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP-NREALKNLNLLQRLSIA 237
I+H NLV+++ C ++ EFM G+L ++L NR+ +N + L +A
Sbjct: 68 IKHPNLVQLLGVCTR-----EPPFYIITEFMTYGNLLDYLRECNRQ---EVNAVVLLYMA 119
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL-------PEATNN 290
++SA++YL + +H DL N L+ V DFGL++ + P
Sbjct: 120 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKF 176
Query: 291 FFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ E ++ S DV++FG+LL E T
Sbjct: 177 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEY 299
+ A++Y H + IVH DLKP N+LLD L + DFGL+ + + NF
Sbjct: 117 IICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG--NFLKTSCGSP 171
Query: 300 GMGSEVSTSG--------DVYSFGILLLETFTGKRPTNEMFTGNL 336
+ +G DV+S GI+L G+ P ++ F NL
Sbjct: 172 NYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL 216
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 28/164 (17%)
Query: 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLH------------PNREALKN 227
+H+N++ ++ +C + ++ E+ G+L E+L P+ +
Sbjct: 133 KHKNIINLLGACTQ-----DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 187
Query: 228 LNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----- 282
L+ +S A VA ++YL +H DL NVL+ + + DFGLA+
Sbjct: 188 LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 244
Query: 283 -FLPEATNNFFNFQ-IAEYGMGSEVST-SGDVYSFGILLLETFT 323
+ + TN + +A + + T DV+SFG+LL E FT
Sbjct: 245 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 28/164 (17%)
Query: 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLH------------PNREALKN 227
+H+N++ ++ +C + ++ E+ G+L E+L P+ +
Sbjct: 84 KHKNIINLLGACTQ-----DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 138
Query: 228 LNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----- 282
L+ +S A VA ++YL +H DL NVL+ + + DFGLA+
Sbjct: 139 LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 195
Query: 283 -FLPEATNNFFNFQ-IAEYGMGSEVST-SGDVYSFGILLLETFT 323
+ + TN + +A + + T DV+SFG+LL E FT
Sbjct: 196 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 28/164 (17%)
Query: 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLH------------PNREALKN 227
+H+N++ ++ +C + ++ E+ G+L E+L P+ +
Sbjct: 92 KHKNIINLLGACTQ-----DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 146
Query: 228 LNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----- 282
L+ +S A VA ++YL +H DL NVL+ + + DFGLA+
Sbjct: 147 LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 203
Query: 283 -FLPEATNNFFNFQ-IAEYGMGSEVST-SGDVYSFGILLLETFT 323
+ + TN + +A + + T DV+SFG+LL E FT
Sbjct: 204 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 28/164 (17%)
Query: 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLH------------PNREALKN 227
+H+N++ ++ +C + ++ E+ G+L E+L P+ +
Sbjct: 81 KHKNIINLLGACTQ-----DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 135
Query: 228 LNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----- 282
L+ +S A VA ++YL +H DL NVL+ + + DFGLA+
Sbjct: 136 LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 192
Query: 283 -FLPEATNNFFNFQ-IAEYGMGSEVST-SGDVYSFGILLLETFT 323
+ + TN + +A + + T DV+SFG+LL E FT
Sbjct: 193 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 28/164 (17%)
Query: 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLH------------PNREALKN 227
+H+N++ ++ +C + ++ E+ G+L E+L P+ +
Sbjct: 77 KHKNIINLLGACTQ-----DGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQ 131
Query: 228 LNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----- 282
L+ +S A VA ++YL +H DL NVL+ + + DFGLA+
Sbjct: 132 LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 188
Query: 283 -FLPEATNNFFNFQ-IAEYGMGSEVST-SGDVYSFGILLLETFT 323
+ + TN + +A + + T DV+SFG+LL E FT
Sbjct: 189 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 21/170 (12%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N++ ++ C + S +V +M +G L ++ R N + + + V
Sbjct: 149 HPNVLSLLGIC----LRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQV 201
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP----EATNNFFNFQI 296
A + +L VH DL N +LD + T V DFGLA+ + ++ +N ++
Sbjct: 202 AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 258
Query: 297 AEYGMGSE------VSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLTLH 339
M E +T DV+SFG+LL E T G P ++ T ++T++
Sbjct: 259 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 308
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 28/164 (17%)
Query: 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLH------------PNREALKN 227
+H+N++ ++ +C + ++ E+ G+L E+L P+ +
Sbjct: 85 KHKNIINLLGACTQ-----DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 139
Query: 228 LNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----- 282
L+ +S A VA ++YL +H DL NVL+ + + DFGLA+
Sbjct: 140 LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 196
Query: 283 -FLPEATNNFFNFQ-IAEYGMGSEVST-SGDVYSFGILLLETFT 323
+ + TN + +A + + T DV+SFG+LL E FT
Sbjct: 197 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 28/164 (17%)
Query: 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLH------------PNREALKN 227
+H+N++ ++ +C + ++ E+ G+L E+L P+ +
Sbjct: 92 KHKNIINLLGACTQ-----DGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQ 146
Query: 228 LNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----- 282
L+ +S A VA ++YL +H DL NVL+ + + DFGLA+
Sbjct: 147 LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 203
Query: 283 -FLPEATNNFFNFQ-IAEYGMGSEVST-SGDVYSFGILLLETFT 323
+ + TN + +A + + T DV+SFG+LL E FT
Sbjct: 204 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 28/164 (17%)
Query: 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLH------------PNREALKN 227
+H+N++ ++ +C + ++ E+ G+L E+L P+ +
Sbjct: 92 KHKNIINLLGACTQ-----DGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQ 146
Query: 228 LNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----- 282
L+ +S A VA ++YL +H DL NVL+ + + DFGLA+
Sbjct: 147 LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 203
Query: 283 -FLPEATNNFFNFQ-IAEYGMGSEVST-SGDVYSFGILLLETFT 323
+ + TN + +A + + T DV+SFG+LL E FT
Sbjct: 204 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 28/166 (16%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H +LV+++ C S Q LV + M +G L E++H +++ N+ L+ V +
Sbjct: 76 HPHLVRLLGVCLSPTIQ------LVTQLMPHGCLLEYVHEHKD---NIGSQLLLNWCVQI 126
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN------- 293
A + YL E +VH DL NVL+ + DFGLA+ L E +N
Sbjct: 127 AKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLL-EGDEKEYNADGGKMP 182
Query: 294 --FQIAEYGMGSEVSTSGDVYSFGILLLE--TFTGKR----PTNEM 331
+ E + + DV+S+G+ + E TF GK PT E+
Sbjct: 183 IKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREI 228
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 21/170 (12%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N++ ++ C + S +V +M +G L ++ R N + + + V
Sbjct: 91 HPNVLSLLGIC----LRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQV 143
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK-FLPEATNNFFN------ 293
A + +L VH DL N +LD + T V DFGLA+ L + ++ N
Sbjct: 144 AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKL 200
Query: 294 ---FQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLTLH 339
+ E + +T DV+SFG+LL E T G P ++ T ++T++
Sbjct: 201 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 250
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 21/170 (12%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N++ ++ C + S +V +M +G L ++ R N + + + V
Sbjct: 90 HPNVLSLLGIC----LRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQV 142
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP----EATNNFFNFQI 296
A + +L VH DL N +LD + T V DFGLA+ + ++ +N ++
Sbjct: 143 AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 199
Query: 297 AEYGMGSE------VSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLTLH 339
M E +T DV+SFG+LL E T G P ++ T ++T++
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 249
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 11/150 (7%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
++H N+V+ + N + +V E+ G L + + + L+ L +
Sbjct: 62 LKHPNIVRYYDRIID---RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 239 DVASALDYLHHYCE--TPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQI 296
+ AL H + ++H DLKP+NV LDG+ +GDFGLA+ L T+ F
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVG 178
Query: 297 AEYGMGSE------VSTSGDVYSFGILLLE 320
Y M E + D++S G LL E
Sbjct: 179 TPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 21/170 (12%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N++ ++ C + S +V +M +G L ++ R N + + + V
Sbjct: 95 HPNVLSLLGIC----LRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQV 147
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP----EATNNFFNFQI 296
A + +L VH DL N +LD + T V DFGLA+ + ++ +N ++
Sbjct: 148 AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 204
Query: 297 AEYGMGSE------VSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLTLH 339
M E +T DV+SFG+LL E T G P ++ T ++T++
Sbjct: 205 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 254
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 63/139 (45%), Gaps = 16/139 (11%)
Query: 199 NDSEALVYEFMVNGSLEEWLHP--NREALKNLNLLQRLSIAVDVASALDYLHHYCETPIV 256
ND L E+ G L ++L+ N LK + LS D++SAL YLH E I+
Sbjct: 91 NDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS---DISSALRYLH---ENRII 144
Query: 257 HCDLKPSNVLLD---GELTAHVGDFGLAKFLP--EATNNF---FNFQIAEYGMGSEVSTS 308
H DLKP N++L L + D G AK L E F + E + + +
Sbjct: 145 HRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVT 204
Query: 309 GDVYSFGILLLETFTGKRP 327
D +SFG L E TG RP
Sbjct: 205 VDYWSFGTLAFECITGFRP 223
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 21/170 (12%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N++ ++ C + S +V +M +G L ++ R N + + + V
Sbjct: 90 HPNVLSLLGIC----LRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQV 142
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP----EATNNFFNFQI 296
A + +L VH DL N +LD + T V DFGLA+ + ++ +N ++
Sbjct: 143 AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 199
Query: 297 AEYGMGSE------VSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLTLH 339
M E +T DV+SFG+LL E T G P ++ T ++T++
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 249
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 63/139 (45%), Gaps = 16/139 (11%)
Query: 199 NDSEALVYEFMVNGSLEEWLHP--NREALKNLNLLQRLSIAVDVASALDYLHHYCETPIV 256
ND L E+ G L ++L+ N LK + LS D++SAL YLH E I+
Sbjct: 90 NDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS---DISSALRYLH---ENRII 143
Query: 257 HCDLKPSNVLLD---GELTAHVGDFGLAKFLP--EATNNF---FNFQIAEYGMGSEVSTS 308
H DLKP N++L L + D G AK L E F + E + + +
Sbjct: 144 HRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVT 203
Query: 309 GDVYSFGILLLETFTGKRP 327
D +SFG L E TG RP
Sbjct: 204 VDYWSFGTLAFECITGFRP 222
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP-NREALKNLNLLQRLSIA 237
I+H NLV+++ C ++ EFM G+L ++L NR+ + + LL +A
Sbjct: 64 IKHPNLVQLLGVCTR-----EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY---MA 115
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK------FLPEATNNF 291
++SA++YL + +H DL N L+ V DFGL++ F A F
Sbjct: 116 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKF 172
Query: 292 -FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ E ++ S DV++FG+LL E T
Sbjct: 173 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 21/170 (12%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N++ ++ C + S +V +M +G L ++ R N + + + V
Sbjct: 88 HPNVLSLLGIC----LRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQV 140
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP----EATNNFFNFQI 296
A + +L VH DL N +LD + T V DFGLA+ + ++ +N ++
Sbjct: 141 AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 197
Query: 297 AEYGMGSE------VSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLTLH 339
M E +T DV+SFG+LL E T G P ++ T ++T++
Sbjct: 198 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 247
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 21/170 (12%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N++ ++ C + S +V +M +G L ++ R N + + + V
Sbjct: 91 HPNVLSLLGIC----LRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQV 143
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP----EATNNFFNFQI 296
A + +L VH DL N +LD + T V DFGLA+ + ++ +N ++
Sbjct: 144 AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 200
Query: 297 AEYGMGSE------VSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLTLH 339
M E +T DV+SFG+LL E T G P ++ T ++T++
Sbjct: 201 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 250
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 13/138 (9%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255
FQ ++ V E++ G L + ++ +L + A ++ L +LH I
Sbjct: 88 FQTKENLFFVMEYLNGGDLMYHI----QSCHKFDLSRATFYAAEIILGLQFLH---SKGI 140
Query: 256 VHCDLKPSNVLLDGELTAHVGDFGLAK--FLPEATNNFF----NFQIAEYGMGSEVSTSG 309
V+ DLK N+LLD + + DFG+ K L +A N F ++ E +G + + S
Sbjct: 141 VYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSV 200
Query: 310 DVYSFGILLLETFTGKRP 327
D +SFG+LL E G+ P
Sbjct: 201 DWWSFGVLLYEMLIGQSP 218
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 19/166 (11%)
Query: 173 LSRNNFIRHRNLVKIITSCASVDFQGNDSEALVY---EFMVNGSLEEWLHPNREALKNLN 229
+S F+ N++K + V ++ +Y EFM GSL ++L + + + L
Sbjct: 52 MSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP 111
Query: 230 LLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATN 289
L + + +A + ++ + +H DL+ +N+L+ L + DFGLA+ + + N
Sbjct: 112 KL--IDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIED--N 164
Query: 290 NFFNFQIAEYGMG---------SEVSTSGDVYSFGILLLETFTGKR 326
+ + A++ + + DV+SFGILL+E T R
Sbjct: 165 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 210
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
+ H N+V +I S LV+EFM L++ L N+ L Q I +
Sbjct: 76 LHHPNIVSLIDVIHS-----ERCLTLVFEFM-EKDLKKVLDENKTGL------QDSQIKI 123
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN----- 293
+ L + H + I+H DLKP N+L++ + + DFGLA+ ++ +
Sbjct: 124 YLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTL 183
Query: 294 -FQIAEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
++ + MGS + STS D++S G + E TGK
Sbjct: 184 WYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 19/166 (11%)
Query: 173 LSRNNFIRHRNLVKIITSCASVDFQGNDSEALVY---EFMVNGSLEEWLHPNREALKNLN 229
+S F+ N++K + V ++ +Y EFM GSL ++L + + + L
Sbjct: 225 MSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP 284
Query: 230 LLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATN 289
L + + +A + ++ + +H DL+ +N+L+ L + DFGLA+ + + N
Sbjct: 285 KL--IDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIED--N 337
Query: 290 NFFNFQIAEYGMG---------SEVSTSGDVYSFGILLLETFTGKR 326
+ + A++ + + DV+SFGILL+E T R
Sbjct: 338 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 383
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
+ H N+V +I S LV+EFM L++ L N+ L Q I +
Sbjct: 76 LHHPNIVSLIDVIHS-----ERCLTLVFEFM-EKDLKKVLDENKTGL------QDSQIKI 123
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN----- 293
+ L + H + I+H DLKP N+L++ + + DFGLA+ ++ +
Sbjct: 124 YLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTL 183
Query: 294 -FQIAEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
++ + MGS + STS D++S G + E TGK
Sbjct: 184 WYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 18/123 (14%)
Query: 207 EFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVL 266
EF G+LE+W+ R + L+ + L + + +DY+H +++ DLKPSN+
Sbjct: 100 EFCDKGTLEQWIEKRRG--EKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIF 154
Query: 267 LDGELTAHVGDFGLAKFLP--------EATNNFFN-FQIAEYGMGSEVSTSGDVYSFGIL 317
L +GDFGL L + T + + QI+ G EV D+Y+ G++
Sbjct: 155 LVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEV----DLYALGLI 210
Query: 318 LLE 320
L E
Sbjct: 211 LAE 213
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 75/170 (44%), Gaps = 25/170 (14%)
Query: 168 IENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLH---PNREA 224
+E L +S+ N H+N+V+ C V Q + ++ E M G L+ +L P
Sbjct: 99 MEALIISKFN---HQNIVR----CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQ 150
Query: 225 LKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGE---LTAHVGDFGLA 281
+L +L L +A D+A YL E +H D+ N LL A +GDFG+A
Sbjct: 151 PSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 207
Query: 282 KFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + A+ + E M ++ D +SFG+LL E F+
Sbjct: 208 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 75/170 (44%), Gaps = 25/170 (14%)
Query: 168 IENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLH---PNREA 224
+E L +S+ N H+N+V+ C V Q + ++ E M G L+ +L P
Sbjct: 74 MEALIISKFN---HQNIVR----CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQ 125
Query: 225 LKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGE---LTAHVGDFGLA 281
+L +L L +A D+A YL E +H D+ N LL A +GDFG+A
Sbjct: 126 PSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 182
Query: 282 KFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + A+ + E M ++ D +SFG+LL E F+
Sbjct: 183 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP-NREALKNLNLLQRLSIA 237
I+H NLV+++ C ++ EFM G+L ++L NR+ +N + L +A
Sbjct: 67 IKHPNLVQLLGVCTR-----EPPFYIIIEFMTYGNLLDYLRECNRQ---EVNAVVLLYMA 118
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL------PEATNNF 291
++SA++YL + +H DL N L+ V DFGL++ + A F
Sbjct: 119 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF 175
Query: 292 -FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ E ++ S DV++FG+LL E T
Sbjct: 176 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 11/126 (8%)
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQ 295
IAV + AL++LH + ++H D+KPSNVL++ + DFG++ +L ++ +
Sbjct: 158 IAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAG 215
Query: 296 IAEYGMGSEV---------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEAL 346
Y + S D++S GI ++E + P + T L V+E
Sbjct: 216 CKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPS 275
Query: 347 PERLAE 352
P+ A+
Sbjct: 276 PQLPAD 281
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 75/170 (44%), Gaps = 25/170 (14%)
Query: 168 IENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLH---PNREA 224
+E L +S+ N H+N+V+ C V Q + ++ E M G L+ +L P
Sbjct: 82 MEALIISKFN---HQNIVR----CIGVSLQ-SLPRFILMELMAGGDLKSFLRETRPRPSQ 133
Query: 225 LKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGE---LTAHVGDFGLA 281
+L +L L +A D+A YL E +H D+ N LL A +GDFG+A
Sbjct: 134 PSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190
Query: 282 KFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + A+ + E M ++ D +SFG+LL E F+
Sbjct: 191 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 75/170 (44%), Gaps = 25/170 (14%)
Query: 168 IENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLH---PNREA 224
+E L +S+ N H+N+V+ C V Q + ++ E M G L+ +L P
Sbjct: 82 MEALIISKFN---HQNIVR----CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQ 133
Query: 225 LKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGE---LTAHVGDFGLA 281
+L +L L +A D+A YL E +H D+ N LL A +GDFG+A
Sbjct: 134 PSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190
Query: 282 KFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + A+ + E M ++ D +SFG+LL E F+
Sbjct: 191 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP-NREALKNLNLLQRLSIA 237
I+H NLV+++ C ++ EFM G+L ++L NR+ +N + L +A
Sbjct: 71 IKHPNLVQLLGVCTR-----EPPFYIIIEFMTYGNLLDYLRECNRQ---EVNAVVLLYMA 122
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK------FLPEATNNF 291
++SA++YL + +H DL N L+ V DFGL++ + A F
Sbjct: 123 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 179
Query: 292 -FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ E ++ S DV++FG+LL E T
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 75/170 (44%), Gaps = 25/170 (14%)
Query: 168 IENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLH---PNREA 224
+E L +S+ N H+N+V+ C V Q + ++ E M G L+ +L P
Sbjct: 89 MEALIISKFN---HQNIVR----CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQ 140
Query: 225 LKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGE---LTAHVGDFGLA 281
+L +L L +A D+A YL E +H D+ N LL A +GDFG+A
Sbjct: 141 PSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 197
Query: 282 KFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + A+ + E M ++ D +SFG+LL E F+
Sbjct: 198 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 75/170 (44%), Gaps = 25/170 (14%)
Query: 168 IENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLH---PNREA 224
+E L +S+ N H+N+V+ C V Q + ++ E M G L+ +L P
Sbjct: 83 MEALIISKFN---HQNIVR----CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQ 134
Query: 225 LKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGE---LTAHVGDFGLA 281
+L +L L +A D+A YL E +H D+ N LL A +GDFG+A
Sbjct: 135 PSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 191
Query: 282 KFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + A+ + E M ++ D +SFG+LL E F+
Sbjct: 192 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP-NREALKNLNLLQRLSIA 237
I+H NLV+++ C ++ EFM G+L ++L NR+ +N + L +A
Sbjct: 71 IKHPNLVQLLGVCTR-----EPPFYIITEFMTYGNLLDYLRECNRQ---EVNAVVLLYMA 122
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK------FLPEATNNF 291
++SA++YL + +H DL N L+ V DFGL++ + A F
Sbjct: 123 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 179
Query: 292 -FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ E ++ S DV++FG+LL E T
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP-NREALKNLNLLQRLSIA 237
I+H NLV+++ C ++ EFM G+L ++L NR+ +N + L +A
Sbjct: 66 IKHPNLVQLLGVCTR-----EPPFYIITEFMTYGNLLDYLRECNRQ---EVNAVVLLYMA 117
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK------FLPEATNNF 291
++SA++YL + +H DL N L+ V DFGL++ + A F
Sbjct: 118 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 292 -FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ E ++ S DV++FG+LL E T
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 96/233 (41%), Gaps = 35/233 (15%)
Query: 107 NGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRL-EQLVMNGNFFRGNIPSSLSSL 165
+G N+ I+K LG + KL+ + +++ + V+ + +G I +S L
Sbjct: 9 DGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYL 68
Query: 166 RGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREAL 225
R +RH +++K+ S D +V E+ N + + ++ +
Sbjct: 69 R-----------LLRHPHIIKLYDVIKS-----KDEIIMVIEYAGNELFDYIVQRDKMSE 112
Query: 226 KNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP 285
+ + + SA++Y H + IVH DLKP N+LLD L + DFGL+ +
Sbjct: 113 QEARRFFQ-----QIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT 164
Query: 286 EATNNFFNFQIAEYGMGSEVSTSG--------DVYSFGILLLETFTGKRPTNE 330
+ NF + SG DV+S G++L + P ++
Sbjct: 165 DG--NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 215
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP-NREALKNLNLLQRLSIA 237
I+H NLV+++ C ++ EFM G+L ++L NR+ +N + L +A
Sbjct: 79 IKHPNLVQLLGVCTR-----EPPFYIITEFMTYGNLLDYLRECNRQ---EVNAVVLLYMA 130
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK------FLPEATNNF 291
++SA++YL + +H DL N L+ V DFGL++ + A F
Sbjct: 131 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 187
Query: 292 -FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ E ++ S DV++FG+LL E T
Sbjct: 188 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP-NREALKNLNLLQRLSIA 237
I+H NLV+++ C ++ EFM G+L ++L NR+ +N + L +A
Sbjct: 70 IKHPNLVQLLGVCTR-----EPPFYIITEFMTYGNLLDYLRECNRQ---EVNAVVLLYMA 121
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK------FLPEATNNF 291
++SA++YL + +H DL N L+ V DFGL++ + A F
Sbjct: 122 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 178
Query: 292 -FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ E ++ S DV++FG+LL E T
Sbjct: 179 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 75/170 (44%), Gaps = 25/170 (14%)
Query: 168 IENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLH---PNREA 224
+E L +S+ N H+N+V+ C V Q + ++ E M G L+ +L P
Sbjct: 97 MEALIISKFN---HQNIVR----CIGVSLQ-SLPRFILMELMAGGDLKSFLRETRPRPSQ 148
Query: 225 LKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGE---LTAHVGDFGLA 281
+L +L L +A D+A YL E +H D+ N LL A +GDFG+A
Sbjct: 149 PSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 205
Query: 282 KFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + A+ + E M ++ D +SFG+LL E F+
Sbjct: 206 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP-NREALKNLNLLQRLSIA 237
I+H NLV+++ C ++ EFM G+L ++L NR+ +N + L +A
Sbjct: 66 IKHPNLVQLLGVCTR-----EPPFYIITEFMTYGNLLDYLRECNRQ---EVNAVVLLYMA 117
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK------FLPEATNNF 291
++SA++YL + +H DL N L+ V DFGL++ + A F
Sbjct: 118 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 292 -FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ E ++ S DV++FG+LL E T
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 75/170 (44%), Gaps = 25/170 (14%)
Query: 168 IENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLH---PNREA 224
+E L +S+ N H+N+V+ C V Q + ++ E M G L+ +L P
Sbjct: 109 MEALIISKFN---HQNIVR----CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQ 160
Query: 225 LKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGE---LTAHVGDFGLA 281
+L +L L +A D+A YL E +H D+ N LL A +GDFG+A
Sbjct: 161 PSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 217
Query: 282 KFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + A+ + E M ++ D +SFG+LL E F+
Sbjct: 218 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP-NREALKNLNLLQRLSIA 237
I+H NLV+++ C ++ EFM G+L ++L NR+ +N + L +A
Sbjct: 71 IKHPNLVQLLGVCTR-----EPPFYIITEFMTYGNLLDYLRECNRQ---EVNAVVLLYMA 122
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK------FLPEATNNF 291
++SA++YL + +H DL N L+ V DFGL++ + A F
Sbjct: 123 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 179
Query: 292 -FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ E ++ S DV++FG+LL E T
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP-NREALKNLNLLQRLSIA 237
I+H NLV+++ C ++ EFM G+L ++L NR+ +N + L +A
Sbjct: 71 IKHPNLVQLLGVCTR-----EPPFYIITEFMTYGNLLDYLRECNRQ---EVNAVVLLYMA 122
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL------PEATNNF 291
++SA++YL + +H DL N L+ V DFGL++ + A F
Sbjct: 123 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF 179
Query: 292 -FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ E ++ S DV++FG+LL E T
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP-NREALKNLNLLQRLSIA 237
I+H NLV+++ C ++ EFM G+L ++L NR+ +N + L +A
Sbjct: 68 IKHPNLVQLLGVCTR-----EPPFYIITEFMTYGNLLDYLRECNRQ---EVNAVVLLYMA 119
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK------FLPEATNNF 291
++SA++YL + +H DL N L+ V DFGL++ + A F
Sbjct: 120 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 176
Query: 292 -FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ E ++ S DV++FG+LL E T
Sbjct: 177 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP-NREALKNLNLLQRLSIA 237
I+H NLV+++ C ++ EFM G+L ++L NR+ + + LL +A
Sbjct: 64 IKHPNLVQLLGVCTR-----EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY---MA 115
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL------PEATNNF 291
++SA++YL + +H DL N L+ V DFGL++ + A F
Sbjct: 116 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF 172
Query: 292 -FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ E ++ S DV++FG+LL E T
Sbjct: 173 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 28/164 (17%)
Query: 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLH------------PNREALKN 227
+H+N++ ++ +C + ++ E+ G+L E+L P+ +
Sbjct: 92 KHKNIINLLGACTQ-----DGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQ 146
Query: 228 LNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP-- 285
L+ +S A VA ++YL +H DL NVL+ + + DFGLA+ +
Sbjct: 147 LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 203
Query: 286 EATNNFFNFQIAEYGMGSEV------STSGDVYSFGILLLETFT 323
+ N ++ M E + DV+SFG+LL E FT
Sbjct: 204 DXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 96/233 (41%), Gaps = 35/233 (15%)
Query: 107 NGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRL-EQLVMNGNFFRGNIPSSLSSL 165
+G N+ I+K LG + KL+ + +++ + V+ + +G I +S L
Sbjct: 8 DGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYL 67
Query: 166 RGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREAL 225
R +RH +++K+ S D +V E+ N + + ++ +
Sbjct: 68 R-----------LLRHPHIIKLYDVIKS-----KDEIIMVIEYAGNELFDYIVQRDKMSE 111
Query: 226 KNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP 285
+ + + SA++Y H + IVH DLKP N+LLD L + DFGL+ +
Sbjct: 112 QEARRFFQ-----QIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163
Query: 286 EATNNFFNFQIAEYGMGSEVSTSG--------DVYSFGILLLETFTGKRPTNE 330
+ NF + SG DV+S G++L + P ++
Sbjct: 164 DG--NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 214
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP-NREALKNLNLLQRLSIA 237
I+H NLV+++ C ++ EFM G+L ++L NR+ + + LL +A
Sbjct: 66 IKHPNLVQLLGVCTR-----EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLY---MA 117
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK------FLPEATNNF 291
++SA++YL + +H DL N L+ V DFGL++ + A F
Sbjct: 118 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 292 -FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ E ++ S DV++FG+LL E T
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP-NREALKNLNLLQRLSIA 237
I+H NLV+++ C ++ EFM G+L ++L NR+ +N + L +A
Sbjct: 68 IKHPNLVQLLGVCTR-----EPPFYIITEFMTYGNLLDYLRECNRQ---EVNAVVLLYMA 119
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK------FLPEATNNF 291
++SA++YL + +H DL N L+ V DFGL++ + A F
Sbjct: 120 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 176
Query: 292 -FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ E ++ S DV++FG+LL E T
Sbjct: 177 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP-NREALKNLNLLQRLSIA 237
I+H NLV+++ C ++ EFM G+L ++L NR+ + + LL +A
Sbjct: 64 IKHPNLVQLLGVCTR-----EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLY---MA 115
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL------PEATNNF 291
++SA++YL + +H DL N L+ V DFGL++ + A F
Sbjct: 116 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF 172
Query: 292 -FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ E ++ S DV++FG+LL E T
Sbjct: 173 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP-NREALKNLNLLQRLSIA 237
I+H NLV+++ C ++ EFM G+L ++L NR+ + + LL +A
Sbjct: 66 IKHPNLVQLLGVCTR-----EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLY---MA 117
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK------FLPEATNNF 291
++SA++YL + +H DL N L+ V DFGL++ + A F
Sbjct: 118 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 292 -FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ E ++ S DV++FG+LL E T
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 75/170 (44%), Gaps = 25/170 (14%)
Query: 168 IENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLH---PNREA 224
+E L +S+ N H+N+V+ C V Q + ++ E M G L+ +L P
Sbjct: 83 MEALIISKLN---HQNIVR----CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQ 134
Query: 225 LKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGE---LTAHVGDFGLA 281
+L +L L +A D+A YL E +H D+ N LL A +GDFG+A
Sbjct: 135 PSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 191
Query: 282 KFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + A+ + E M ++ D +SFG+LL E F+
Sbjct: 192 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 94/227 (41%), Gaps = 35/227 (15%)
Query: 113 NFGILKNLGAIDISENKLSGQIPSSIGSCIRL-EQLVMNGNFFRGNIPSSLSSLRGIENL 171
N+ I+K LG + KL+ + +++ + V+ + +G I +S LR
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLR----- 59
Query: 172 DLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLL 231
+RH +++K+ S D +V E+ N + + ++ + +
Sbjct: 60 ------LLRHPHIIKLYDVIKS-----KDEIIMVIEYAGNELFDYIVQRDKMSEQEARRF 108
Query: 232 QRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF 291
+ + SA++Y H + IVH DLKP N+LLD L + DFGL+ + + NF
Sbjct: 109 FQ-----QIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG--NF 158
Query: 292 FNFQIAEYGMGSEVSTSG--------DVYSFGILLLETFTGKRPTNE 330
+ SG DV+S G++L + P ++
Sbjct: 159 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 205
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP-NREALKNLNLLQRLSIA 237
I+H NLV+++ C ++ EFM G+L ++L NR+ + + LL +A
Sbjct: 66 IKHPNLVQLLGVCTR-----EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY---MA 117
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK------FLPEATNNF 291
++SA++YL + +H DL N L+ V DFGL++ + A F
Sbjct: 118 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 292 -FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ E ++ S DV++FG+LL E T
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 11/150 (7%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
++H N+V+ + N + +V E+ G L + + + L+ L +
Sbjct: 62 LKHPNIVRYYDRIID---RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 239 DVASALDYLHHYCE--TPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQI 296
+ AL H + ++H DLKP+NV LDG+ +GDFGLA+ L + F
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVG 178
Query: 297 AEYGMGSE------VSTSGDVYSFGILLLE 320
Y M E + D++S G LL E
Sbjct: 179 TPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP-NREALKNLNLLQRLSIA 237
I+H NLV+++ C ++ EFM G+L ++L NR+ + + LL +A
Sbjct: 71 IKHPNLVQLLGVCTR-----EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY---MA 122
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK------FLPEATNNF 291
++SA++YL + +H DL N L+ V DFGL++ + A F
Sbjct: 123 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 179
Query: 292 -FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ E ++ S DV++FG+LL E T
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 75/170 (44%), Gaps = 25/170 (14%)
Query: 168 IENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLH---PNREA 224
+E L +S+ N H+N+V+ C V Q + ++ E M G L+ +L P
Sbjct: 97 MEALIISKFN---HQNIVR----CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQ 148
Query: 225 LKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGE---LTAHVGDFGLA 281
+L +L L +A D+A YL E +H D+ N LL A +GDFG+A
Sbjct: 149 PSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 205
Query: 282 KFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + A+ + E M ++ D +SFG+LL E F+
Sbjct: 206 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP-NREALKNLNLLQRLSIA 237
I+H NLV+++ C ++ EFM G+L ++L NR+ + + LL +A
Sbjct: 66 IKHPNLVQLLGVCTR-----EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY---MA 117
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK------FLPEATNNF 291
++SA++YL + +H DL N L+ V DFGL++ + A F
Sbjct: 118 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 292 -FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ E ++ S DV++FG+LL E T
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 96/233 (41%), Gaps = 35/233 (15%)
Query: 107 NGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRL-EQLVMNGNFFRGNIPSSLSSL 165
+G N+ I+K LG + KL+ + +++ + V+ + +G I +S L
Sbjct: 3 DGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYL 62
Query: 166 RGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREAL 225
R +RH +++K+ S D +V E+ N + + ++ +
Sbjct: 63 R-----------LLRHPHIIKLYDVIKS-----KDEIIMVIEYAGNELFDYIVQRDKMSE 106
Query: 226 KNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP 285
+ + + SA++Y H + IVH DLKP N+LLD L + DFGL+ +
Sbjct: 107 QEARRFFQ-----QIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT 158
Query: 286 EATNNFFNFQIAEYGMGSEVSTSG--------DVYSFGILLLETFTGKRPTNE 330
+ NF + SG DV+S G++L + P ++
Sbjct: 159 DG--NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 209
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 75/170 (44%), Gaps = 25/170 (14%)
Query: 168 IENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLH---PNREA 224
+E L +S+ N H+N+V+ C V Q + ++ E M G L+ +L P
Sbjct: 83 MEALIISKFN---HQNIVR----CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQ 134
Query: 225 LKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGE---LTAHVGDFGLA 281
+L +L L +A D+A YL E +H D+ N LL A +GDFG+A
Sbjct: 135 PSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 191
Query: 282 KFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + A+ + E M ++ D +SFG+LL E F+
Sbjct: 192 QDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 75/170 (44%), Gaps = 25/170 (14%)
Query: 168 IENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLH---PNREA 224
+E L +S+ N H+N+V+ C V Q + ++ E M G L+ +L P
Sbjct: 97 MEALIISKLN---HQNIVR----CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQ 148
Query: 225 LKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGE---LTAHVGDFGLA 281
+L +L L +A D+A YL E +H D+ N LL A +GDFG+A
Sbjct: 149 PSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 205
Query: 282 KFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + A+ + E M ++ D +SFG+LL E F+
Sbjct: 206 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 23/180 (12%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+V + +S + D +V EF+ G+L + + R +N Q ++ + V
Sbjct: 101 HDNVVDMYSS-----YLVGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIATVCLSV 150
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYG 300
AL YLH+ ++H D+K ++LL + + DFG + + Y
Sbjct: 151 LRALSYLHN---QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYW 207
Query: 301 MGSEV------STSGDVYSFGILLLETFTGKRPT-NEMFTGNLTLHNFVKEALPERLAEI 353
M EV T D++S GI+++E G+ P NE L ++++LP R+ ++
Sbjct: 208 MAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNE---PPLQAMRRIRDSLPPRVKDL 264
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 76/172 (44%), Gaps = 29/172 (16%)
Query: 168 IENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLH---PNREA 224
+E L +S+ N H+N+V+ C V Q + ++ E M G L+ +L P
Sbjct: 100 MEALIISKFN---HQNIVR----CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQ 151
Query: 225 LKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGE---LTAHVGDFGLA 281
+L +L L +A D+A YL E +H D+ N LL A +GDFG+A
Sbjct: 152 PSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 208
Query: 282 KFLPEATNNFF----------NFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + A ++ + E M ++ D +SFG+LL E F+
Sbjct: 209 RDIYRA--GYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 76/172 (44%), Gaps = 29/172 (16%)
Query: 168 IENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLH---PNREA 224
+E L +S+ N H+N+V+ C V Q + ++ E M G L+ +L P
Sbjct: 123 MEALIISKFN---HQNIVR----CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQ 174
Query: 225 LKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGE---LTAHVGDFGLA 281
+L +L L +A D+A YL E +H D+ N LL A +GDFG+A
Sbjct: 175 PSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 231
Query: 282 KFLPEATNNFF----------NFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + A ++ + E M ++ D +SFG+LL E F+
Sbjct: 232 RDIYRA--GYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 237 AVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK--FLPEATNNFF-- 292
+ +++ AL+YLH E I++ DLK NVLLD E + D+G+ K P T + F
Sbjct: 127 SAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCG 183
Query: 293 --NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
N+ E G + S D ++ G+L+ E G+ P
Sbjct: 184 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSP 220
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 84/200 (42%), Gaps = 36/200 (18%)
Query: 176 NNFIR---------HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALK 226
++FIR HRNL+++ + + +V E GSL + L ++
Sbjct: 60 DDFIREVNAMHSLDHRNLIRLYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHF- 112
Query: 227 NLNLLQRLS-IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP 285
LL LS AV VA + YL +H DL N+LL +GDFGL + LP
Sbjct: 113 ---LLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 166
Query: 286 EATNNF---------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNEMFTGN 335
+ +++ F + E S + D + FG+ L E FT G+ P + G+
Sbjct: 167 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL-NGS 225
Query: 336 LTLHNFVKEALPERLAEIVD 355
LH KE ERL D
Sbjct: 226 QILHKIDKEG--ERLPRPED 243
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 84/200 (42%), Gaps = 36/200 (18%)
Query: 176 NNFIR---------HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALK 226
++FIR HRNL+++ + + +V E GSL + L ++
Sbjct: 66 DDFIREVNAMHSLDHRNLIRLYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHF- 118
Query: 227 NLNLLQRLS-IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP 285
LL LS AV VA + YL +H DL N+LL +GDFGL + LP
Sbjct: 119 ---LLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172
Query: 286 EATNNF---------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNEMFTGN 335
+ +++ F + E S + D + FG+ L E FT G+ P + G+
Sbjct: 173 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL-NGS 231
Query: 336 LTLHNFVKEALPERLAEIVD 355
LH KE ERL D
Sbjct: 232 QILHKIDKEG--ERLPRPED 249
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 84/200 (42%), Gaps = 36/200 (18%)
Query: 176 NNFIR---------HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALK 226
++FIR HRNL+++ + + +V E GSL + L ++
Sbjct: 60 DDFIREVNAMHSLDHRNLIRLYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHF- 112
Query: 227 NLNLLQRLS-IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP 285
LL LS AV VA + YL +H DL N+LL +GDFGL + LP
Sbjct: 113 ---LLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 166
Query: 286 EATNNF---------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNEMFTGN 335
+ +++ F + E S + D + FG+ L E FT G+ P + G+
Sbjct: 167 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL-NGS 225
Query: 336 LTLHNFVKEALPERLAEIVD 355
LH KE ERL D
Sbjct: 226 QILHKIDKEG--ERLPRPED 243
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 14/134 (10%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
++ E++ GS + L P L+ Q +I ++ LDYLH + +H D+K +
Sbjct: 102 IIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSEKK---IHRDIKAA 153
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYGMGSEV------STSGDVYSFGIL 317
NVLL + DFG+A L + F + M EV + D++S GI
Sbjct: 154 NVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGIT 213
Query: 318 LLETFTGKRPTNEM 331
+E G+ P +E+
Sbjct: 214 AIELARGEPPHSEL 227
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 237 AVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK--FLPEATNNFF-- 292
+ +++ AL+YLH E I++ DLK NVLLD E + D+G+ K P T + F
Sbjct: 112 SAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCG 168
Query: 293 --NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTN 329
N+ E G + S D ++ G+L+ E G+ P +
Sbjct: 169 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 11/127 (8%)
Query: 235 SIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNF 294
IAV + AL++LH + ++H D+KPSNVL++ + DFG++ +L + +
Sbjct: 113 KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA 170
Query: 295 QIAEYGMGSEV---------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEA 345
Y + S D++S GI ++E + P + T L V+E
Sbjct: 171 GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEP 230
Query: 346 LPERLAE 352
P+ A+
Sbjct: 231 SPQLPAD 237
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 84/200 (42%), Gaps = 36/200 (18%)
Query: 176 NNFIR---------HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALK 226
++FIR HRNL+++ + + +V E GSL + L ++
Sbjct: 56 DDFIREVNAMHSLDHRNLIRLYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHF- 108
Query: 227 NLNLLQRLS-IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP 285
LL LS AV VA + YL +H DL N+LL +GDFGL + LP
Sbjct: 109 ---LLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 162
Query: 286 EATNNF---------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNEMFTGN 335
+ +++ F + E S + D + FG+ L E FT G+ P + G+
Sbjct: 163 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL-NGS 221
Query: 336 LTLHNFVKEALPERLAEIVD 355
LH KE ERL D
Sbjct: 222 QILHKIDKEG--ERLPRPED 239
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 84/200 (42%), Gaps = 36/200 (18%)
Query: 176 NNFIR---------HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALK 226
++FIR HRNL+++ + + +V E GSL + L ++
Sbjct: 56 DDFIREVNAMHSLDHRNLIRLYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHF- 108
Query: 227 NLNLLQRLS-IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP 285
LL LS AV VA + YL +H DL N+LL +GDFGL + LP
Sbjct: 109 ---LLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 162
Query: 286 EATNNF---------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNEMFTGN 335
+ +++ F + E S + D + FG+ L E FT G+ P + G+
Sbjct: 163 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL-NGS 221
Query: 336 LTLHNFVKEALPERLAEIVD 355
LH KE ERL D
Sbjct: 222 QILHKIDKEG--ERLPRPED 239
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 14/134 (10%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
++ E++ GS + L P L+ Q +I ++ LDYLH + +H D+K +
Sbjct: 82 IIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSEKK---IHRDIKAA 133
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYGMGSEV------STSGDVYSFGIL 317
NVLL + DFG+A L + F + M EV + D++S GI
Sbjct: 134 NVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGIT 193
Query: 318 LLETFTGKRPTNEM 331
+E G+ P +E+
Sbjct: 194 AIELARGEPPHSEL 207
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 237 AVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK--FLPEATNNFF-- 292
+ +++ AL+YLH E I++ DLK NVLLD E + D+G+ K P T + F
Sbjct: 116 SAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCG 172
Query: 293 --NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTN 329
N+ E G + S D ++ G+L+ E G+ P +
Sbjct: 173 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 14/134 (10%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
++ E++ GS + L P L+ Q +I ++ LDYLH + +H D+K +
Sbjct: 97 IIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSEKK---IHRDIKAA 148
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYGMGSEV------STSGDVYSFGIL 317
NVLL + DFG+A L + F + M EV + D++S GI
Sbjct: 149 NVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGIT 208
Query: 318 LLETFTGKRPTNEM 331
+E G+ P +E+
Sbjct: 209 AIELARGEPPHSEL 222
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 237 AVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK--FLPEATNNFF-- 292
+ +++ AL+YLH E I++ DLK NVLLD E + D+G+ K P T + F
Sbjct: 159 SAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCG 215
Query: 293 --NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
N+ E G + S D ++ G+L+ E G+ P
Sbjct: 216 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSP 252
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 14/134 (10%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
++ E++ GS + L P L+ Q +I ++ LDYLH + +H D+K +
Sbjct: 82 IIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSEKK---IHRDIKAA 133
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYGMGSEV------STSGDVYSFGIL 317
NVLL + DFG+A L + F + M EV + D++S GI
Sbjct: 134 NVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGIT 193
Query: 318 LLETFTGKRPTNEM 331
+E G+ P +E+
Sbjct: 194 AIELARGEPPHSEL 207
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 19/153 (12%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP-NREALKNLNLLQRLSIA 237
I+H NLV+++ C +V E+M G+L ++L NRE + + LL +A
Sbjct: 85 IKHPNLVQLLGVCTL-----EPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLY---MA 136
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK------FLPEATNNF 291
++SA++YL + +H DL N L+ V DFGL++ + A F
Sbjct: 137 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKF 193
Query: 292 -FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ E + S DV++FG+LL E T
Sbjct: 194 PIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 25/112 (22%)
Query: 200 DSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259
D LV+E M GS+ +H R + N L+ + DVASALD+LH+ I H D
Sbjct: 84 DRFYLVFEKMRGGSILSHIHKRR----HFNELEASVVVQDVASALDFLHN---KGIAHRD 136
Query: 260 LKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYGMGSEVSTSGDV 311
LKP N+L E N +I ++G+GS + +GD
Sbjct: 137 LKPENILC------------------EHPNQVSPVKICDFGLGSGIKLNGDC 170
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP-NREALKNLNLLQRLSIA 237
I+H NLV+++ C ++ EFM G+L ++L NR+ +N + L +A
Sbjct: 270 IKHPNLVQLLGVCTR-----EPPFYIITEFMTYGNLLDYLRECNRQ---EVNAVVLLYMA 321
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK------FLPEATNNF 291
++SA++YL + +H +L N L+ V DFGL++ + A F
Sbjct: 322 TQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 378
Query: 292 -FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ E ++ S DV++FG+LL E T
Sbjct: 379 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 24/179 (13%)
Query: 159 PSSLSSLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWL 218
P ++S +E +L + ++H LV++ + ++ E+M GSL ++L
Sbjct: 47 PGTMSVQAFLEEANLMKT--LQHDKLVRLYAVVTR-----EEPIYIITEYMAKGSLLDFL 99
Query: 219 HPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDF 278
+ E K L L + + + +A + Y+ +H DL+ +NVL+ L + DF
Sbjct: 100 KSD-EGGKVL-LPKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADF 154
Query: 279 GLAKFLPEATNNFFNFQIAEYGMGSEV---------STSGDVYSFGILLLETFT-GKRP 327
GLA+ + + N + + A++ + + DV+SFGILL E T GK P
Sbjct: 155 GLARVIED--NEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIP 211
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP-NREALKNLNLLQRLSIA 237
I+H NLV+++ C ++ EFM G+L ++L NR+ +N + L +A
Sbjct: 312 IKHPNLVQLLGVCTR-----EPPFYIITEFMTYGNLLDYLRECNRQ---EVNAVVLLYMA 363
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK------FLPEATNNF 291
++SA++YL + +H +L N L+ V DFGL++ + A F
Sbjct: 364 TQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 420
Query: 292 -FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ E ++ S DV++FG+LL E T
Sbjct: 421 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 25/154 (16%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+V++I C +V E + G +L L+ LLQ + D
Sbjct: 171 HPNIVRLIGVCTQ-----KQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVG---DA 222
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK-----------FLPEATN 289
A+ ++YL C +H DL N L+ + + DFG+++ L +
Sbjct: 223 AAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPV 279
Query: 290 NFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + YG S+ DV+SFGILL ETF+
Sbjct: 280 KWTAPEALNYG---RYSSESDVWSFGILLWETFS 310
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 28/164 (17%)
Query: 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP------------NREALKN 227
+H+N++ ++ +C + ++ E+ G+L E+L NR +
Sbjct: 99 KHKNIINLLGACTQ-----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 228 LNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----- 282
+ +S +A ++YL +H DL NVL+ + DFGLA+
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNI 210
Query: 283 -FLPEATNNFFNFQ-IAEYGMGSEVST-SGDVYSFGILLLETFT 323
+ + TN + +A + V T DV+SFG+L+ E FT
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 65/168 (38%), Gaps = 13/168 (7%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255
++ D+ LV M G L+ H + + A ++ L+ LH I
Sbjct: 253 YETKDALCLVLTLMNGGDLK--FHIYHMGQAGFPEARAVFYAAEICCGLEDLHR---ERI 307
Query: 256 VHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATN-----NFFNFQIAEYGMGSEVSTSGD 310
V+ DLKP N+LLD + D GLA +PE + E + S D
Sbjct: 308 VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPD 367
Query: 311 VYSFGILLLETFTGKRPTNEMFT--GNLTLHNFVKEALPERLAEIVDP 356
++ G LL E G+ P + + VKE +PE +E P
Sbjct: 368 WWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE-VPEEYSERFSP 414
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 28/164 (17%)
Query: 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP------------NREALKN 227
+H+N++ ++ +C + ++ E+ G+L E+L NR +
Sbjct: 145 KHKNIINLLGACTQ-----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 199
Query: 228 LNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----- 282
+ +S +A ++YL +H DL NVL+ + DFGLA+
Sbjct: 200 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 256
Query: 283 -FLPEATNNFFNFQ-IAEYGMGSEVST-SGDVYSFGILLLETFT 323
+ + TN + +A + V T DV+SFG+L+ E FT
Sbjct: 257 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 25/154 (16%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+V++I C +V E + G +L L+ LLQ + D
Sbjct: 171 HPNIVRLIGVCTQ-----KQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVG---DA 222
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK-----------FLPEATN 289
A+ ++YL C +H DL N L+ + + DFG+++ L +
Sbjct: 223 AAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPV 279
Query: 290 NFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + YG S+ DV+SFGILL ETF+
Sbjct: 280 KWTAPEALNYG---RYSSESDVWSFGILLWETFS 310
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 65/168 (38%), Gaps = 13/168 (7%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255
++ D+ LV M G L+ H + + A ++ L+ LH I
Sbjct: 253 YETKDALCLVLTLMNGGDLK--FHIYHMGQAGFPEARAVFYAAEICCGLEDLHR---ERI 307
Query: 256 VHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATN-----NFFNFQIAEYGMGSEVSTSGD 310
V+ DLKP N+LLD + D GLA +PE + E + S D
Sbjct: 308 VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPD 367
Query: 311 VYSFGILLLETFTGKRPTNEMFT--GNLTLHNFVKEALPERLAEIVDP 356
++ G LL E G+ P + + VKE +PE +E P
Sbjct: 368 WWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE-VPEEYSERFSP 414
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP-NREALKNLNLLQRLSIA 237
I+H NLV+++ C ++ EFM G+L ++L NR+ + + LL +A
Sbjct: 273 IKHPNLVQLLGVCTR-----EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY---MA 324
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK------FLPEATNNF 291
++SA++YL + +H +L N L+ V DFGL++ + A F
Sbjct: 325 TQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 381
Query: 292 -FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ E ++ S DV++FG+LL E T
Sbjct: 382 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 28/164 (17%)
Query: 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP------------NREALKN 227
+H+N++ ++ +C + ++ E+ G+L E+L NR +
Sbjct: 99 KHKNIITLLGACTQ-----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 228 LNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----- 282
+ +S +A ++YL +H DL NVL+ + DFGLA+
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 283 -FLPEATNNFFNFQ-IAEYGMGSEVST-SGDVYSFGILLLETFT 323
+ + TN + +A + V T DV+SFG+L+ E FT
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 28/164 (17%)
Query: 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP------------NREALKN 227
+H+N++ ++ +C + ++ E+ G+L E+L NR +
Sbjct: 88 KHKNIINLLGACTQ-----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 142
Query: 228 LNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----- 282
+ +S +A ++YL +H DL NVL+ + DFGLA+
Sbjct: 143 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 199
Query: 283 -FLPEATNNFFNFQ-IAEYGMGSEVST-SGDVYSFGILLLETFT 323
+ + TN + +A + V T DV+SFG+L+ E FT
Sbjct: 200 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 28/164 (17%)
Query: 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP------------NREALKN 227
+H+N++ ++ +C + ++ E+ G+L E+L NR +
Sbjct: 99 KHKNIIHLLGACTQ-----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 228 LNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----- 282
+ +S +A ++YL +H DL NVL+ + DFGLA+
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 283 -FLPEATNNFFNFQ-IAEYGMGSEVST-SGDVYSFGILLLETFT 323
+ + TN + +A + V T DV+SFG+L+ E FT
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 28/164 (17%)
Query: 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP------------NREALKN 227
+H+N++ ++ +C + ++ E+ G+L E+L NR +
Sbjct: 91 KHKNIINLLGACTQ-----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 145
Query: 228 LNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----- 282
+ +S +A ++YL +H DL NVL+ + DFGLA+
Sbjct: 146 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 202
Query: 283 -FLPEATNNFFNFQ-IAEYGMGSEVST-SGDVYSFGILLLETFT 323
+ + TN + +A + V T DV+SFG+L+ E FT
Sbjct: 203 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 28/164 (17%)
Query: 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP------------NREALKN 227
+H+N++ ++ +C + ++ E+ G+L E+L NR +
Sbjct: 86 KHKNIINLLGACTQ-----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 140
Query: 228 LNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----- 282
+ +S +A ++YL +H DL NVL+ + DFGLA+
Sbjct: 141 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNI 197
Query: 283 -FLPEATNNFFNFQ-IAEYGMGSEVST-SGDVYSFGILLLETFT 323
+ + TN + +A + V T DV+SFG+L+ E FT
Sbjct: 198 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 28/164 (17%)
Query: 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP------------NREALKN 227
+H+N++ ++ +C + ++ E+ G+L E+L NR +
Sbjct: 99 KHKNIINLLGACTQ-----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 228 LNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----- 282
+ +S +A ++YL +H DL NVL+ + DFGLA+
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 283 -FLPEATNNFFNFQ-IAEYGMGSEVST-SGDVYSFGILLLETFT 323
+ + TN + +A + V T DV+SFG+L+ E FT
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 11/98 (11%)
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL-PEA----TNNFF 292
++ SAL+YLH I+H DLKP N+LL+ ++ + DFG AK L PE+ N+F
Sbjct: 139 AEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV 195
Query: 293 ---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
+ E S S D+++ G ++ + G P
Sbjct: 196 GTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 24/179 (13%)
Query: 159 PSSLSSLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWL 218
P ++S +E +L + ++H LV++ + ++ EFM GSL ++L
Sbjct: 46 PGTMSVQAFLEEANLMKT--LQHDKLVRLYAVVTK-----EEPIYIITEFMAKGSLLDFL 98
Query: 219 HPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDF 278
+ E K L L + + + +A + Y+ +H DL+ +NVL+ L + DF
Sbjct: 99 KSD-EGGKVL-LPKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADF 153
Query: 279 GLAKFLPEATNNFFNFQIAEYGMGSEV---------STSGDVYSFGILLLETFT-GKRP 327
GLA+ + + N + + A++ + + +V+SFGILL E T GK P
Sbjct: 154 GLARVIED--NEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIP 210
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 83/200 (41%), Gaps = 36/200 (18%)
Query: 176 NNFIR---------HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALK 226
++FIR HRNL+++ + + +V E GSL + L ++
Sbjct: 66 DDFIREVNAMHSLDHRNLIRLYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHF- 118
Query: 227 NLNLLQRLS-IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP 285
LL LS AV VA + YL +H DL N+LL +GDFGL + LP
Sbjct: 119 ---LLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172
Query: 286 EATNNF---------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNEMFTGN 335
+ ++ F + E S + D + FG+ L E FT G+ P + G+
Sbjct: 173 QNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL-NGS 231
Query: 336 LTLHNFVKEALPERLAEIVD 355
LH KE ERL D
Sbjct: 232 QILHKIDKEG--ERLPRPED 249
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 25/157 (15%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE-------ALKN-----L 228
H N++ ++ +C + L E+ +G+L ++L +R A+ N L
Sbjct: 85 HPNIINLLGACEHRGYL-----YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 139
Query: 229 NLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----FL 284
+ Q L A DVA +DYL + +H DL N+L+ A + DFGL++ ++
Sbjct: 140 SSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV 196
Query: 285 PEATNNFFNFQIAEYGMGSEV-STSGDVYSFGILLLE 320
+ +A + V +T+ DV+S+G+LL E
Sbjct: 197 KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 233
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 83/200 (41%), Gaps = 36/200 (18%)
Query: 176 NNFIR---------HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALK 226
++FIR HRNL+++ + + +V E GSL + L ++
Sbjct: 56 DDFIREVNAMHSLDHRNLIRLYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHF- 108
Query: 227 NLNLLQRLS-IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP 285
LL LS AV VA + YL +H DL N+LL +GDFGL + LP
Sbjct: 109 ---LLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 162
Query: 286 EATNNF---------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNEMFTGN 335
+ ++ F + E S + D + FG+ L E FT G+ P + G+
Sbjct: 163 QNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL-NGS 221
Query: 336 LTLHNFVKEALPERLAEIVD 355
LH KE ERL D
Sbjct: 222 QILHKIDKEG--ERLPRPED 239
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 28/164 (17%)
Query: 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP------------NREALKN 227
+H+N++ ++ +C + ++ E+ G+L E+L NR +
Sbjct: 99 KHKNIINLLGACTQ-----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 228 LNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----- 282
+ +S +A ++YL +H DL NVL+ + DFGLA+
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 283 -FLPEATNNFFNFQ-IAEYGMGSEVST-SGDVYSFGILLLETFT 323
+ TN + +A + V T DV+SFG+L+ E FT
Sbjct: 211 DYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 11/127 (8%)
Query: 235 SIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNF 294
IAV + AL++LH + ++H D+KPSNVL++ DFG++ +L + +
Sbjct: 140 KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 295 QIAEYGMGSEV---------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEA 345
Y + S D++S GI +E + P + T L V+E
Sbjct: 198 GCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEP 257
Query: 346 LPERLAE 352
P+ A+
Sbjct: 258 SPQLPAD 264
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 25/157 (15%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE-------ALKN-----L 228
H N++ ++ +C + L E+ +G+L ++L +R A+ N L
Sbjct: 75 HPNIINLLGACEHRGYL-----YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 129
Query: 229 NLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----FL 284
+ Q L A DVA +DYL + +H DL N+L+ A + DFGL++ ++
Sbjct: 130 SSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV 186
Query: 285 PEATNNFFNFQIAEYGMGSEV-STSGDVYSFGILLLE 320
+ +A + V +T+ DV+S+G+LL E
Sbjct: 187 KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 223
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 29/183 (15%)
Query: 166 RGIENLD---LSRNNFIRHR----NLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWL 218
+G E D + R I H+ +V++I C + ++ LV E G L ++L
Sbjct: 47 QGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------EALMLVMEMAGGGPLHKFL 100
Query: 219 HPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDF 278
RE + N+ + L V+ + YL E VH DL NVLL A + DF
Sbjct: 101 VGKREEIPVSNVAELLH---QVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDF 154
Query: 279 GLAKFLPEATNNFFNFQIAEYGMG---------SEVSTSGDVYSFGILLLETFT-GKRPT 328
GL+K L + + ++ + + S+ DV+S+G+ + E + G++P
Sbjct: 155 GLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPY 214
Query: 329 NEM 331
+M
Sbjct: 215 KKM 217
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 17/131 (12%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKN------LNLLQRLSIAVDVASALDYLHHYCETPIVH 257
+V E M +G L+ +L R +N L + + +A ++A + YL+ VH
Sbjct: 94 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVH 150
Query: 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF--------FNFQIAEYGMGSEVSTSG 309
DL N ++ + T +GDFG+ + + E + E +TS
Sbjct: 151 RDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSS 210
Query: 310 DVYSFGILLLE 320
D++SFG++L E
Sbjct: 211 DMWSFGVVLWE 221
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 231 LQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNN 290
Q ++ ++ LDYLH + +H D+K +NVLL + + DFG+A L +
Sbjct: 120 FQIATMLKEILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK 176
Query: 291 FFNFQIAEYGMGSEV------STSGDVYSFGILLLETFTGKRPTNEM 331
F + M EV + D++S GI +E G+ P ++M
Sbjct: 177 RNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDM 223
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 67/157 (42%), Gaps = 23/157 (14%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H ++V+++ C Q LV +++ GSL + + +R AL LL + V +
Sbjct: 74 HAHIVRLLGLCPGSSLQ------LVTQYLPLGSLLDHVRQHRGALGPQLLL---NWGVQI 124
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP---------EATNNF 291
A + YL E +VH +L NVLL V DFG+A LP EA
Sbjct: 125 AKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPI 181
Query: 292 FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRP 327
+ G S DV+S+G+ + E T G P
Sbjct: 182 KWMALESIHFGKYTHQS-DVWSYGVTVWELMTFGAEP 217
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 17/131 (12%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKN------LNLLQRLSIAVDVASALDYLHHYCETPIVH 257
+V E M +G L+ +L R +N L + + +A ++A + YL+ VH
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVH 153
Query: 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF--------FNFQIAEYGMGSEVSTSG 309
DL N ++ + T +GDFG+ + + E + E +TS
Sbjct: 154 RDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSS 213
Query: 310 DVYSFGILLLE 320
D++SFG++L E
Sbjct: 214 DMWSFGVVLWE 224
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 107/265 (40%), Gaps = 35/265 (13%)
Query: 99 LDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNF---FR 155
+D + GP F K L D+ N L+ R+E+ + G F +R
Sbjct: 1 MDEQSQGMQGPPVPQFQPQKALRP-DMGYNTLAN---------FRIEKKIGRGQFSEVYR 50
Query: 156 G-----NIPSSLSSLRGIENLDL-SRNNFIRHRNLVKIITSCASVDFQGN---DSEA-LV 205
+P +L ++ + +D +R + I+ +L+K + + + + D+E +V
Sbjct: 51 AACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110
Query: 206 YEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNV 265
E G L + ++ + + V + SAL+++H ++H D+KP+NV
Sbjct: 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANV 167
Query: 266 LLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYGMGSE------VSTSGDVYSFGILLL 319
+ +GD GL +F T + Y M E + D++S G LL
Sbjct: 168 FITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLY 227
Query: 320 ETFTGKRPTNEMFTGNLTLHNFVKE 344
E + P + + L++ K+
Sbjct: 228 EMAALQSP---FYGDKMNLYSLCKK 249
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 19/132 (14%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKN------LNLLQRLSIAVDVASALDYLHHYCETPIVH 257
+V E M +G L+ +L R +N L + + +A ++A + YL+ VH
Sbjct: 96 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVH 152
Query: 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF---------FNFQIAEYGMGSEVSTS 308
DL N ++ + T +GDFG+ + + E T+ + + E +TS
Sbjct: 153 RDLAARNCMVAHDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMAPESLKDGVFTTS 211
Query: 309 GDVYSFGILLLE 320
D++SFG++L E
Sbjct: 212 SDMWSFGVVLWE 223
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 17/131 (12%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKN------LNLLQRLSIAVDVASALDYLHHYCETPIVH 257
+V E M +G L+ +L R +N L + + +A ++A + YL+ VH
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVH 153
Query: 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF--------FNFQIAEYGMGSEVSTSG 309
DL N ++ + T +GDFG+ + + E + E +TS
Sbjct: 154 RDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSS 213
Query: 310 DVYSFGILLLE 320
D++SFG++L E
Sbjct: 214 DMWSFGVVLWE 224
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 67/157 (42%), Gaps = 23/157 (14%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H ++V+++ C Q LV +++ GSL + + +R AL LL + V +
Sbjct: 92 HAHIVRLLGLCPGSSLQ------LVTQYLPLGSLLDHVRQHRGALGPQLLL---NWGVQI 142
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP---------EATNNF 291
A + YL E +VH +L NVLL V DFG+A LP EA
Sbjct: 143 AKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPI 199
Query: 292 FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRP 327
+ G S DV+S+G+ + E T G P
Sbjct: 200 KWMALESIHFGKYTHQS-DVWSYGVTVWELMTFGAEP 235
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 13/99 (13%)
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL-PEATNNFFNFQI 296
++ SAL+YLH I+H DLKP N+LL+ ++ + DFG AK L PE+ N +
Sbjct: 114 AEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 170
Query: 297 --AEYGMGSEVST------SGDVYSFGILLLETFTGKRP 327
A+Y + E+ T S D+++ G ++ + G P
Sbjct: 171 GTAQY-VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 13/99 (13%)
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL-PEATNNFFNFQI 296
++ SAL+YLH I+H DLKP N+LL+ ++ + DFG AK L PE+ N +
Sbjct: 115 AEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 171
Query: 297 --AEYGMGSEVST------SGDVYSFGILLLETFTGKRP 327
A+Y + E+ T S D+++ G ++ + G P
Sbjct: 172 GTAQY-VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
Query: 178 FIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQR---L 234
++ RN VK +T+ + + + E+ NG+L + +H +NLN QR
Sbjct: 71 WLERRNFVKPMTAV-----KKKSTLFIQMEYCENGTLYDLIHS-----ENLNQ-QRDEYW 119
Query: 235 SIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK 282
+ + AL Y+H I+H DLKP N+ +D +GDFGLAK
Sbjct: 120 RLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 13/99 (13%)
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL-PEATNNFFNFQI 296
++ SAL+YLH I+H DLKP N+LL+ ++ + DFG AK L PE+ N +
Sbjct: 116 AEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 172
Query: 297 --AEYGMGSEVST------SGDVYSFGILLLETFTGKRP 327
A+Y + E+ T S D+++ G ++ + G P
Sbjct: 173 GTAQY-VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 13/99 (13%)
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL-PEATNNFFNFQI 296
++ SAL+YLH I+H DLKP N+LL+ ++ + DFG AK L PE+ N +
Sbjct: 117 AEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 173
Query: 297 --AEYGMGSEVST------SGDVYSFGILLLETFTGKRP 327
A+Y + E+ T S D+++ G ++ + G P
Sbjct: 174 GTAQY-VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 19/132 (14%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKN------LNLLQRLSIAVDVASALDYLHHYCETPIVH 257
+V E M +G L+ +L R +N L + + +A ++A + YL+ VH
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVH 153
Query: 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF---------FNFQIAEYGMGSEVSTS 308
DL N ++ + T +GDFG+ + + E T+ + + E +TS
Sbjct: 154 RDLAARNCMVAHDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMAPESLKDGVFTTS 212
Query: 309 GDVYSFGILLLE 320
D++SFG++L E
Sbjct: 213 SDMWSFGVVLWE 224
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 13/99 (13%)
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL-PEATNNFFNFQI 296
++ SAL+YLH I+H DLKP N+LL+ ++ + DFG AK L PE+ N +
Sbjct: 121 AEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 177
Query: 297 --AEYGMGSEVST------SGDVYSFGILLLETFTGKRP 327
A+Y + E+ T S D+++ G ++ + G P
Sbjct: 178 GTAQY-VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 19/135 (14%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLL------QRLSIAVDVASALDYLHHYCETPIVH 257
++ E M G L+ +L R A+ N +L + + +A ++A + YL+ VH
Sbjct: 95 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVH 151
Query: 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF---------FNFQIAEYGMGSEVSTS 308
DL N ++ + T +GDFG+ + + E T+ + + E +T
Sbjct: 152 RDLAARNCMVAEDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTY 210
Query: 309 GDVYSFGILLLETFT 323
DV+SFG++L E T
Sbjct: 211 SDVWSFGVVLWEIAT 225
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 13/99 (13%)
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL-PEATNNFFNFQI 296
++ SAL+YLH I+H DLKP N+LL+ ++ + DFG AK L PE+ N +
Sbjct: 137 AEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 193
Query: 297 --AEYGMGSEVST------SGDVYSFGILLLETFTGKRP 327
A+Y + E+ T S D+++ G ++ + G P
Sbjct: 194 GTAQY-VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 13/99 (13%)
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL-PEATNNFFNFQI 296
++ SAL+YLH I+H DLKP N+LL+ ++ + DFG AK L PE+ N +
Sbjct: 137 AEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 193
Query: 297 --AEYGMGSEVST------SGDVYSFGILLLETFTGKRP 327
A+Y + E+ T S D+++ G ++ + G P
Sbjct: 194 GTAQY-VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 13/99 (13%)
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL-PEATNNFFNFQI 296
++ SAL+YLH I+H DLKP N+LL+ ++ + DFG AK L PE+ N +
Sbjct: 137 AEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 193
Query: 297 --AEYGMGSEVST------SGDVYSFGILLLETFTGKRP 327
A+Y + E+ T S D+++ G ++ + G P
Sbjct: 194 GTAQY-VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 13/99 (13%)
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL-PEATNNFFNFQI 296
++ SAL+YLH I+H DLKP N+LL+ ++ + DFG AK L PE+ N +
Sbjct: 142 AEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 198
Query: 297 --AEYGMGSEVST------SGDVYSFGILLLETFTGKRP 327
A+Y + E+ T S D+++ G ++ + G P
Sbjct: 199 GTAQY-VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 13/99 (13%)
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL-PEATNNFFNFQI 296
++ SAL+YLH I+H DLKP N+LL+ ++ + DFG AK L PE+ N +
Sbjct: 136 AEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 192
Query: 297 --AEYGMGSEVST------SGDVYSFGILLLETFTGKRP 327
A+Y + E+ T S D+++ G ++ + G P
Sbjct: 193 GTAQY-VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 13/99 (13%)
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL-PEATNNFFNFQI 296
++ SAL+YLH I+H DLKP N+LL+ ++ + DFG AK L PE+ N +
Sbjct: 139 AEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 297 --AEYGMGSEVST------SGDVYSFGILLLETFTGKRP 327
A+Y + E+ T S D+++ G ++ + G P
Sbjct: 196 GTAQY-VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 13/99 (13%)
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL-PEATNNFFNFQI 296
++ SAL+YLH I+H DLKP N+LL+ ++ + DFG AK L PE+ N +
Sbjct: 139 AEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 297 --AEYGMGSEVST------SGDVYSFGILLLETFTGKRP 327
A+Y + E+ T S D+++ G ++ + G P
Sbjct: 196 GTAQY-VSPELLTEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 13/99 (13%)
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL-PEATNNFFNFQI 296
++ SAL+YLH I+H DLKP N+LL+ ++ + DFG AK L PE+ N +
Sbjct: 139 AEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 297 --AEYGMGSEVST------SGDVYSFGILLLETFTGKRP 327
A+Y + E+ T S D+++ G ++ + G P
Sbjct: 196 GTAQY-VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 28/164 (17%)
Query: 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP------------NREALKN 227
+H+N++ ++ +C + ++ E+ G+L E+L NR +
Sbjct: 99 KHKNIINLLGACTQ-----DGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQ 153
Query: 228 LNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL--- 284
+ +S +A ++YL +H DL NVL+ + DFGLA+ +
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 285 ---PEATNNFFNFQ-IAEYGMGSEVST-SGDVYSFGILLLETFT 323
+ TN + +A + V T DV+SFG+L+ E FT
Sbjct: 211 DXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 13/99 (13%)
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL-PEATNNFFNFQI 296
++ SAL+YLH I+H DLKP N+LL+ ++ + DFG AK L PE+ N +
Sbjct: 139 AEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 297 --AEYGMGSEVST------SGDVYSFGILLLETFTGKRP 327
A+Y + E+ T S D+++ G ++ + G P
Sbjct: 196 GTAQY-VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 13/99 (13%)
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL-PEATNNFFNFQI 296
++ SAL+YLH I+H DLKP N+LL+ ++ + DFG AK L PE+ N +
Sbjct: 144 AEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 200
Query: 297 --AEYGMGSEVST------SGDVYSFGILLLETFTGKRP 327
A+Y + E+ T S D+++ G ++ + G P
Sbjct: 201 GTAQY-VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 13/99 (13%)
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL-PEATNNFFNFQI 296
++ SAL+YLH I+H DLKP N+LL+ ++ + DFG AK L PE+ N +
Sbjct: 140 AEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 196
Query: 297 --AEYGMGSEVST------SGDVYSFGILLLETFTGKRP 327
A+Y + E+ T S D+++ G ++ + G P
Sbjct: 197 GTAQY-VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 13/99 (13%)
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL-PEATNNFFNFQI 296
++ SAL+YLH I+H DLKP N+LL+ ++ + DFG AK L PE+ N +
Sbjct: 139 AEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 297 --AEYGMGSEVST------SGDVYSFGILLLETFTGKRP 327
A+Y + E+ T S D+++ G ++ + G P
Sbjct: 196 GTAQY-VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 35/140 (25%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKN------LNLLQRLSIAVDVASALDYLHHYCETPIVH 257
+V E M +G L+ +L R +N L + + +A ++A + YL+ VH
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVH 153
Query: 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYGMGSE------------- 304
DL N ++ + T +GDFG+ + + ++ A Y G +
Sbjct: 154 RDLAARNCMVAHDFTVKIGDFGMTRDI---------YETAYYRKGGKGLLPVRWMAPESL 204
Query: 305 ----VSTSGDVYSFGILLLE 320
+TS D++SFG++L E
Sbjct: 205 KDGVFTTSSDMWSFGVVLWE 224
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 73/186 (39%), Gaps = 40/186 (21%)
Query: 168 IENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKN 227
I ++ R + H N+ + I V G LV E+ NGSL ++L +L
Sbjct: 53 INEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL-----SLHT 107
Query: 228 LNLLQRLSIAVDVASALDYLH-------HYCETPIVHCDLKPSNVLLDGELTAHVGDFGL 280
+ + +A V L YLH HY + I H DL NVL+ + T + DFGL
Sbjct: 108 SDWVSSCRLAHSVTRGLAYLHTELPRGDHY-KPAISHRDLNSRNVLVKNDGTCVISDFGL 166
Query: 281 AKFLPEATNNFF-------NFQIAEYG----MGSEVSTSG-------------DVYSFGI 316
+ L T N N I+E G M EV D+Y+ G+
Sbjct: 167 SMRL---TGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGL 223
Query: 317 LLLETF 322
+ E F
Sbjct: 224 IYWEIF 229
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 12/138 (8%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255
FQ +D V E+ G L + H +RE + + + + ++ SALDYLH E +
Sbjct: 220 FQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRAR--FYGAEIVSALDYLH--SEKNV 273
Query: 256 VHCDLKPSNVLLDGELTAHVGDFGLAK--FLPEATNNFF----NFQIAEYGMGSEVSTSG 309
V+ DLK N++LD + + DFGL K AT F + E ++ +
Sbjct: 274 VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAV 333
Query: 310 DVYSFGILLLETFTGKRP 327
D + G+++ E G+ P
Sbjct: 334 DWWGLGVVMYEMMCGRLP 351
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 19/135 (14%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLL------QRLSIAVDVASALDYLHHYCETPIVH 257
++ E M G L+ +L R A+ N +L + + +A ++A + YL+ VH
Sbjct: 105 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVH 161
Query: 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF---------FNFQIAEYGMGSEVSTS 308
DL N ++ + T +GDFG+ + + E T+ + + E +T
Sbjct: 162 RDLAARNCMVAEDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTY 220
Query: 309 GDVYSFGILLLETFT 323
DV+SFG++L E T
Sbjct: 221 SDVWSFGVVLWEIAT 235
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 28/164 (17%)
Query: 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP------------NREALKN 227
+H+N++ ++ +C + ++ E+ G+L E+L NR +
Sbjct: 99 KHKNIINLLGACTQ-----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 228 LNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL--- 284
+ +S +A ++YL +H DL NVL+ + DFGLA+ +
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 285 ---PEATNNFFNFQ-IAEYGMGSEVST-SGDVYSFGILLLETFT 323
+ TN + +A + V T DV+SFG+L+ E FT
Sbjct: 211 DXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 12/138 (8%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255
FQ +D V E+ G L + H +RE + + + + ++ SALDYLH E +
Sbjct: 217 FQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRAR--FYGAEIVSALDYLH--SEKNV 270
Query: 256 VHCDLKPSNVLLDGELTAHVGDFGLAK--FLPEATNNFF----NFQIAEYGMGSEVSTSG 309
V+ DLK N++LD + + DFGL K AT F + E ++ +
Sbjct: 271 VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAV 330
Query: 310 DVYSFGILLLETFTGKRP 327
D + G+++ E G+ P
Sbjct: 331 DWWGLGVVMYEMMCGRLP 348
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 11/98 (11%)
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL-PEA----TNNFF 292
++ SAL+YLH I+H DLKP N+LL+ ++ + DFG AK L PE+ N+F
Sbjct: 136 AEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV 192
Query: 293 ---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
+ E S D+++ G ++ + G P
Sbjct: 193 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 17/101 (16%)
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL-PEATNNFFNFQI 296
++ SAL+YLH I+H DLKP N+LL+ ++ + DFG AK L PE+ N
Sbjct: 137 AEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN--- 190
Query: 297 AEYGMGSEVS----------TSGDVYSFGILLLETFTGKRP 327
A G VS S D+++ G ++ + G P
Sbjct: 191 AFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 18/141 (12%)
Query: 200 DSEALVYEFMVNGSL---EEW---LHPNREALKNLNLLQRLSIAVDVASALDYLHHYCET 253
D ++YE+M N S+ +E+ L N + +++ I V ++ Y+H+ E
Sbjct: 116 DEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIK--CIIKSVLNSFSYIHN--EK 171
Query: 254 PIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA----TNNFFNFQIAEYGMGSEVSTSG 309
I H D+KPSN+L+D + DFG ++++ + + + F E+ +E S +G
Sbjct: 172 NICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEF-FSNESSYNG 230
Query: 310 ---DVYSFGILLLETFTGKRP 327
D++S GI L F P
Sbjct: 231 AKVDIWSLGICLYVMFYNVVP 251
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 29/168 (17%)
Query: 180 RHRNLVKIITSCAS----------------VDFQGNDSEALVYEFMVNGSLEEWLHPNRE 223
+H N+V ++ +C ++F +EA++ + G E L ++E
Sbjct: 93 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGL--DKE 150
Query: 224 ALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKF 283
+ L L L + VA + +L +H D+ NVLL A +GDFGLA+
Sbjct: 151 DGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 207
Query: 284 LPEATNNFF--NFQIAEYGMGSE------VSTSGDVYSFGILLLETFT 323
+ +N N ++ M E + DV+S+GILL E F+
Sbjct: 208 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 58/207 (28%)
Query: 181 HRNLVKIITSCASVDFQGNDSEA-LVYEFMVNGSLEEWLHPNREALKNLNLLQ---RLSI 236
H N+V ++ + ND + LV+++M E LH A+ N+L+ + +
Sbjct: 68 HENIVNLLNVLRA----DNDRDVYLVFDYM-----ETDLH----AVIRANILEPVHKQYV 114
Query: 237 AVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK-------------- 282
+ + YLH ++H D+KPSN+LL+ E V DFGL++
Sbjct: 115 VYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPL 171
Query: 283 FLPEATNNFFN-------------FQIAEYGMGSEVSTSG-DVYSFGILLLETFTGKRPT 328
+ E T NF + ++ E +GS T G D++S G +L E GK
Sbjct: 172 SINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK--- 228
Query: 329 NEMFTGNLTLHNFVKEALPERLAEIVD 355
+F G+ T++ ER+ ++D
Sbjct: 229 -PIFPGSSTMNQL------ERIIGVID 248
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 12/138 (8%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255
FQ +D V E+ G L + H +RE + + + + ++ SALDYLH E +
Sbjct: 78 FQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRAR--FYGAEIVSALDYLH--SEKNV 131
Query: 256 VHCDLKPSNVLLDGELTAHVGDFGLAK--FLPEATNNFF----NFQIAEYGMGSEVSTSG 309
V+ DLK N++LD + + DFGL K AT F + E ++ +
Sbjct: 132 VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAV 191
Query: 310 DVYSFGILLLETFTGKRP 327
D + G+++ E G+ P
Sbjct: 192 DWWGLGVVMYEMMCGRLP 209
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 12/138 (8%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255
FQ +D V E+ G L + H +RE + + + + ++ SALDYLH E +
Sbjct: 77 FQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRAR--FYGAEIVSALDYLH--SEKNV 130
Query: 256 VHCDLKPSNVLLDGELTAHVGDFGLAK--FLPEATNNFF----NFQIAEYGMGSEVSTSG 309
V+ DLK N++LD + + DFGL K AT F + E ++ +
Sbjct: 131 VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAV 190
Query: 310 DVYSFGILLLETFTGKRP 327
D + G+++ E G+ P
Sbjct: 191 DWWGLGVVMYEMMCGRLP 208
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 11/98 (11%)
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL-PEA----TNNFF 292
++ SAL+YLH I+H DLKP N+LL+ ++ + DFG AK L PE+ N+F
Sbjct: 140 AEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV 196
Query: 293 ---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
+ E S D+++ G ++ + G P
Sbjct: 197 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 25/112 (22%)
Query: 200 DSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259
D LV+E M GS+ +H R + N L+ + DVASALD+LH+ I H D
Sbjct: 84 DRFYLVFEKMRGGSILSHIHKRR----HFNELEASVVVQDVASALDFLHN---KGIAHRD 136
Query: 260 LKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYGMGSEVSTSGDV 311
LKP N+L E N +I ++ +GS + +GD
Sbjct: 137 LKPENILC------------------EHPNQVSPVKICDFDLGSGIKLNGDC 170
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 12/138 (8%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255
FQ +D V E+ G L + H +RE + + + + ++ SALDYLH E +
Sbjct: 79 FQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRAR--FYGAEIVSALDYLH--SEKNV 132
Query: 256 VHCDLKPSNVLLDGELTAHVGDFGLAK--FLPEATNNFF----NFQIAEYGMGSEVSTSG 309
V+ DLK N++LD + + DFGL K AT F + E ++ +
Sbjct: 133 VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAV 192
Query: 310 DVYSFGILLLETFTGKRP 327
D + G+++ E G+ P
Sbjct: 193 DWWGLGVVMYEMMCGRLP 210
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 28/164 (17%)
Query: 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP------------NREALKN 227
+H+N++ ++ +C + ++ + G+L E+L NR +
Sbjct: 99 KHKNIINLLGACTQ-----DGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 228 LNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----- 282
+ +S +A ++YL +H DL NVL+ + DFGLA+
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 283 -FLPEATNNFFNFQ-IAEYGMGSEVST-SGDVYSFGILLLETFT 323
+ + TN + +A + V T DV+SFG+L+ E FT
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 14/113 (12%)
Query: 219 HPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDF 278
HP+ AL +L+ S A ++ + YL E +VH DL N+L+ + DF
Sbjct: 141 HPDERALTMGDLI---SFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDF 194
Query: 279 GLAKFLPEATNNFFNFQ--IAEYGMGSE------VSTSGDVYSFGILLLETFT 323
GL++ + E + Q I M E +T DV+SFG+LL E T
Sbjct: 195 GLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 67/162 (41%), Gaps = 26/162 (16%)
Query: 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVD 239
+H N+V ++ +C ++ E+ G L +L R + L +IA
Sbjct: 108 QHENIVNLLGACTH-----GGPVLVITEYCCYGDLLNFL---RRKSRVLETDPAFAIANS 159
Query: 240 VASALDYLHHYCETP----------IVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATN 289
AS D LH + +H D+ NVLL A +GDFGLA+ + +N
Sbjct: 160 TASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 219
Query: 290 NFF--NFQIAEYGMGSE------VSTSGDVYSFGILLLETFT 323
N ++ M E + DV+S+GILL E F+
Sbjct: 220 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 67/158 (42%), Gaps = 22/158 (13%)
Query: 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREAL------KNLNLLQR 233
+H N+V ++ +C ++ E+ G L +L EA + L L
Sbjct: 100 QHENIVNLLGACTH-----GGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDL 154
Query: 234 LSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF- 292
L + VA + +L +H D+ NVLL A +GDFGLA+ + +N
Sbjct: 155 LHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 211
Query: 293 -NFQIAEYGMGSE------VSTSGDVYSFGILLLETFT 323
N ++ M E + DV+S+GILL E F+
Sbjct: 212 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 14/113 (12%)
Query: 219 HPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDF 278
HP+ AL +L+ S A ++ + YL E +VH DL N+L+ + DF
Sbjct: 141 HPDERALTMGDLI---SFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDF 194
Query: 279 GLAKFLPEATNNFFNFQ--IAEYGMGSE------VSTSGDVYSFGILLLETFT 323
GL++ + E + Q I M E +T DV+SFG+LL E T
Sbjct: 195 GLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 67/158 (42%), Gaps = 22/158 (13%)
Query: 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREAL------KNLNLLQR 233
+H N+V ++ +C ++ E+ G L +L EA + L L
Sbjct: 108 QHENIVNLLGACTH-----GGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDL 162
Query: 234 LSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF- 292
L + VA + +L +H D+ NVLL A +GDFGLA+ + +N
Sbjct: 163 LHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 219
Query: 293 -NFQIAEYGMGSE------VSTSGDVYSFGILLLETFT 323
N ++ M E + DV+S+GILL E F+
Sbjct: 220 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 14/113 (12%)
Query: 219 HPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDF 278
HP+ AL +L+ S A ++ + YL E +VH DL N+L+ + DF
Sbjct: 141 HPDERALTMGDLI---SFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDF 194
Query: 279 GLAKFLPEATNNFFNFQ--IAEYGMGSE------VSTSGDVYSFGILLLETFT 323
GL++ + E + Q I M E +T DV+SFG+LL E T
Sbjct: 195 GLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 17/134 (12%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLL------QRLSIAVDVASALDYLHHYCETPIVH 257
++ E M G L+ +L R ++N +L + + +A ++A + YL+ VH
Sbjct: 90 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVH 146
Query: 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF--------FNFQIAEYGMGSEVSTSG 309
DL N ++ + T +GDFG+ + + E + E +T
Sbjct: 147 RDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYS 206
Query: 310 DVYSFGILLLETFT 323
DV+SFG++L E T
Sbjct: 207 DVWSFGVVLWEIAT 220
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 47/234 (20%)
Query: 109 PLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRL-EQLVMNGNFFRGNIPSSLSSL-R 166
P N+ +LK +G + ++ KL+ I + I++ ++ +N P+SL L R
Sbjct: 9 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLN--------PTSLQKLFR 60
Query: 167 GIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALK 226
+ + + + H N+VK+ + + L+ E+ G + ++L A
Sbjct: 61 EVRIMKI-----LNHPNIVKLFEVIET-----EKTLYLIMEYASGGEVFDYL----VAHG 106
Query: 227 NLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL-- 284
+ + S + SA+ Y H + IVH DLK N+LLD ++ + DFG +
Sbjct: 107 RMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV 163
Query: 285 -----------PEATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
P A FQ +Y G EV DV+S G++L +G P
Sbjct: 164 GGKLDTFCGSPPYAAPEL--FQGKKYD-GPEV----DVWSLGVILYTLVSGSLP 210
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 47/234 (20%)
Query: 109 PLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRL-EQLVMNGNFFRGNIPSSLSSL-R 166
P N+ +LK +G + ++ KL+ I + I++ ++ +N P+SL L R
Sbjct: 12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLN--------PTSLQKLFR 63
Query: 167 GIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALK 226
+ + + + H N+VK+ + + L+ E+ G + ++L A
Sbjct: 64 EVRIMKI-----LNHPNIVKLFEVIET-----EKTLYLIMEYASGGEVFDYL----VAHG 109
Query: 227 NLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL-- 284
+ + S + SA+ Y H + IVH DLK N+LLD ++ + DFG +
Sbjct: 110 RMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV 166
Query: 285 -----------PEATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
P A FQ +Y G EV DV+S G++L +G P
Sbjct: 167 GGKLDAFCGAPPYAAPEL--FQGKKYD-GPEV----DVWSLGVILYTLVSGSLP 213
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 25/157 (15%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE-------ALKN-----L 228
H N++ ++ +C + L E+ +G+L ++L +R A+ N L
Sbjct: 82 HPNIINLLGACEHRGYL-----YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 136
Query: 229 NLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----FL 284
+ Q L A DVA +DYL + +H +L N+L+ A + DFGL++ ++
Sbjct: 137 SSQQLLHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYV 193
Query: 285 PEATNNFFNFQIAEYGMGSEV-STSGDVYSFGILLLE 320
+ +A + V +T+ DV+S+G+LL E
Sbjct: 194 KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 230
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 41/180 (22%)
Query: 183 NLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP--------------------NR 222
N+VK++ CA L++E+M G L E+L +
Sbjct: 111 NIVKLLGVCAV-----GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSS 165
Query: 223 EALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK 282
L+ ++L IA VA+ + YL E VH DL N L+ + + DFGL++
Sbjct: 166 PGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSR 222
Query: 283 FLPEATNNFF----NFQIAEYGMGSE------VSTSGDVYSFGILLLETFT-GKRPTNEM 331
+ A +++ N I M E +T DV+++G++L E F+ G +P M
Sbjct: 223 NIYSA--DYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM 280
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 28/164 (17%)
Query: 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP------------NREALKN 227
+H+N++ ++ +C + ++ + G+L E+L NR +
Sbjct: 99 KHKNIINLLGACTQ-----DGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 228 LNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----- 282
+ +S +A ++YL +H DL NVL+ + DFGLA+
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 283 -FLPEATNNFFNFQ-IAEYGMGSEVST-SGDVYSFGILLLETFT 323
+ + TN + +A + V T DV+SFG+L+ E FT
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 19/135 (14%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLL------QRLSIAVDVASALDYLHHYCETPIVH 257
++ E M G L+ +L R ++N +L + + +A ++A + YL+ VH
Sbjct: 92 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVH 148
Query: 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF---------FNFQIAEYGMGSEVSTS 308
DL N ++ + T +GDFG+ + + E T+ + + E +T
Sbjct: 149 RDLAARNCMVAEDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTY 207
Query: 309 GDVYSFGILLLETFT 323
DV+SFG++L E T
Sbjct: 208 SDVWSFGVVLWEIAT 222
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 17/134 (12%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLL------QRLSIAVDVASALDYLHHYCETPIVH 257
++ E M G L+ +L R ++N +L + + +A ++A + YL+ VH
Sbjct: 99 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVH 155
Query: 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF--------FNFQIAEYGMGSEVSTSG 309
DL N ++ + T +GDFG+ + + E + E +T
Sbjct: 156 RDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYS 215
Query: 310 DVYSFGILLLETFT 323
DV+SFG++L E T
Sbjct: 216 DVWSFGVVLWEIAT 229
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 18/115 (15%)
Query: 225 LKNLNLLQRLSIAVDVASALDYL--------HHYCETPIVHCDLKPSNVLLDGELTAHVG 276
L + NL Q + + +D + YL H I+H DLKPSN+++ + T +
Sbjct: 110 LMDANLCQVIQMELD-HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 168
Query: 277 DFGLAK-------FLPEATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTG 324
DFGLA+ PE ++ GMG + + D++S G ++ E G
Sbjct: 169 DFGLARTAGTSFMMTPEVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMIKG 221
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 77/179 (43%), Gaps = 27/179 (15%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWL-HPNREALKNLNLLQRLSIAV- 238
H N+V TS F D LV + + GS+ + + H + +L +IA
Sbjct: 67 HPNIVSYYTS-----FVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 121
Query: 239 --DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP---EATNNFF- 292
+V L+YLH + +H D+K N+LL + + + DFG++ FL + T N
Sbjct: 122 LREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVR 178
Query: 293 -NFQIAEYGMGSEV-------STSGDVYSFGILLLETFTGKRPTNE---MFTGNLTLHN 340
F M EV D++SFGI +E TG P ++ M LTL N
Sbjct: 179 KTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQN 237
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 19/135 (14%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLL------QRLSIAVDVASALDYLHHYCETPIVH 257
++ E M G L+ +L R ++N +L + + +A ++A + YL+ VH
Sbjct: 98 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVH 154
Query: 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF---------FNFQIAEYGMGSEVSTS 308
DL N ++ + T +GDFG+ + + E T+ + + E +T
Sbjct: 155 RDLAARNCMVAEDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTY 213
Query: 309 GDVYSFGILLLETFT 323
DV+SFG++L E T
Sbjct: 214 SDVWSFGVVLWEIAT 228
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 19/135 (14%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLL------QRLSIAVDVASALDYLHHYCETPIVH 257
++ E M G L+ +L R ++N +L + + +A ++A + YL+ VH
Sbjct: 98 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVH 154
Query: 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF---------FNFQIAEYGMGSEVSTS 308
DL N ++ + T +GDFG+ + + E T+ + + E +T
Sbjct: 155 RDLAARNCMVAEDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTY 213
Query: 309 GDVYSFGILLLETFT 323
DV+SFG++L E T
Sbjct: 214 SDVWSFGVVLWEIAT 228
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 19/135 (14%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLL------QRLSIAVDVASALDYLHHYCETPIVH 257
++ E M G L+ +L R ++N +L + + +A ++A + YL+ VH
Sbjct: 96 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVH 152
Query: 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF---------FNFQIAEYGMGSEVSTS 308
DL N ++ + T +GDFG+ + + E T+ + + E +T
Sbjct: 153 RDLAARNCMVAEDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTY 211
Query: 309 GDVYSFGILLLETFT 323
DV+SFG++L E T
Sbjct: 212 SDVWSFGVVLWEIAT 226
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 19/135 (14%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLL------QRLSIAVDVASALDYLHHYCETPIVH 257
++ E M G L+ +L R ++N +L + + +A ++A + YL+ VH
Sbjct: 99 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVH 155
Query: 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF---------FNFQIAEYGMGSEVSTS 308
DL N ++ + T +GDFG+ + + E T+ + + E +T
Sbjct: 156 RDLAARNCMVAEDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTY 214
Query: 309 GDVYSFGILLLETFT 323
DV+SFG++L E T
Sbjct: 215 SDVWSFGVVLWEIAT 229
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 232 QRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL------P 285
QR+S A D+AS + YLH I+H DL N L+ V DFGLA+ + P
Sbjct: 109 QRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165
Query: 286 EATNNF--------FNFQIAEYGMGSEV------STSGDVYSFGILLLE 320
E + + Y M E+ DV+SFGI+L E
Sbjct: 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCE 214
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 77/179 (43%), Gaps = 27/179 (15%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWL-HPNREALKNLNLLQRLSIAV- 238
H N+V TS F D LV + + GS+ + + H + +L +IA
Sbjct: 72 HPNIVSYYTS-----FVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 126
Query: 239 --DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP---EATNNFF- 292
+V L+YLH + +H D+K N+LL + + + DFG++ FL + T N
Sbjct: 127 LREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVR 183
Query: 293 -NFQIAEYGMGSEV-------STSGDVYSFGILLLETFTGKRPTNE---MFTGNLTLHN 340
F M EV D++SFGI +E TG P ++ M LTL N
Sbjct: 184 KTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQN 242
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 70/170 (41%), Gaps = 35/170 (20%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREAL--------------- 225
H N+V ++ +C + L++E+ G L +L RE
Sbjct: 108 HENIVNLLGACTL-----SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEE 162
Query: 226 -KNLNLL---QRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLA 281
++LN+L L A VA +++L VH DL NVL+ + DFGLA
Sbjct: 163 EEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLA 219
Query: 282 KFLPEATNNFF--NFQIAEYGMGSE------VSTSGDVYSFGILLLETFT 323
+ + +N N ++ M E + DV+S+GILL E F+
Sbjct: 220 RDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 247 LHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK-------FLPEATNNFFNFQIAEY 299
+ H I+H DLKPSN+++ + T + DFGLA+ P ++
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 300 GMGSEVSTSGDVYSFGILLLETFTG 324
GMG + + D++S G+++ E G
Sbjct: 199 GMGYKENV--DIWSVGVIMGEMIKG 221
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 19/135 (14%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLL------QRLSIAVDVASALDYLHHYCETPIVH 257
++ E M G L+ +L R ++N +L + + +A ++A + YL+ VH
Sbjct: 127 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVH 183
Query: 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF---------FNFQIAEYGMGSEVSTS 308
DL N ++ + T +GDFG+ + + E T+ + + E +T
Sbjct: 184 RDLAARNCMVAEDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTY 242
Query: 309 GDVYSFGILLLETFT 323
DV+SFG++L E T
Sbjct: 243 SDVWSFGVVLWEIAT 257
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 19/135 (14%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLL------QRLSIAVDVASALDYLHHYCETPIVH 257
++ E M G L+ +L R ++N +L + + +A ++A + YL+ VH
Sbjct: 105 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVH 161
Query: 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF---------FNFQIAEYGMGSEVSTS 308
DL N ++ + T +GDFG+ + + E T+ + + E +T
Sbjct: 162 RDLAARNCMVAEDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTY 220
Query: 309 GDVYSFGILLLETFT 323
DV+SFG++L E T
Sbjct: 221 SDVWSFGVVLWEIAT 235
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 247 LHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK-------FLPEATNNFFNFQIAEY 299
+ H I+H DLKPSN+++ + T + DFGLA+ P ++
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 300 GMGSEVSTSGDVYSFGILLLETFTG 324
GMG + + D++S G+++ E G
Sbjct: 199 GMGYKENV--DIWSVGVIMGEMIKG 221
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 73/166 (43%), Gaps = 33/166 (19%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEA---LVYEFMVNGSLEEWLHPNREALKNLNLLQRLS 235
++H NL++ I + + +G++ E L+ F GSL ++L N L
Sbjct: 66 MKHENLLQFIAA----EKRGSNLEVELWLITAFHDKGSLTDYLKGNIITWNEL-----CH 116
Query: 236 IAVDVASALDYLHH---YC-----ETPIVHCDLKPSNVLLDGELTAHVGDFGLA-KFLPE 286
+A ++ L YLH +C + I H D K NVLL +LTA + DFGLA +F P
Sbjct: 117 VAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPG 176
Query: 287 ATNNFFNFQIA-EYGMGSEVSTSG-----------DVYSFGILLLE 320
+ Q+ M EV D+Y+ G++L E
Sbjct: 177 KPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWE 222
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 19/132 (14%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKN------LNLLQRLSIAVDVASALDYLHHYCETPIVH 257
+V E M +G L+ +L R +N L + + +A ++A + YL+ VH
Sbjct: 98 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVH 154
Query: 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF---------FNFQIAEYGMGSEVSTS 308
+L N ++ + T +GDFG+ + + E T+ + + E +TS
Sbjct: 155 RNLAARNCMVAHDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMAPESLKDGVFTTS 213
Query: 309 GDVYSFGILLLE 320
D++SFG++L E
Sbjct: 214 SDMWSFGVVLWE 225
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 19/132 (14%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKN------LNLLQRLSIAVDVASALDYLHHYCETPIVH 257
+V E M +G L+ +L R +N L + + +A ++A + YL+ VH
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVH 153
Query: 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF---------FNFQIAEYGMGSEVSTS 308
+L N ++ + T +GDFG+ + + E T+ + + E +TS
Sbjct: 154 RNLAARNCMVAHDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMAPESLKDGVFTTS 212
Query: 309 GDVYSFGILLLE 320
D++SFG++L E
Sbjct: 213 SDMWSFGVVLWE 224
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 31/184 (16%)
Query: 166 RGIENLD---LSRNNFIRHR----NLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWL 218
+G E D + R I H+ +V++I C + ++ LV E G L ++L
Sbjct: 373 QGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------EALMLVMEMAGGGPLHKFL 426
Query: 219 HPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDF 278
RE + N+ + L V+ + YL E VH +L NVLL A + DF
Sbjct: 427 VGKREEIPVSNVAELLH---QVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDF 480
Query: 279 GLAKFLPEATNNFF------NFQIAEYGMG----SEVSTSGDVYSFGILLLETFT-GKRP 327
GL+K L A ++++ + + Y + S+ DV+S+G+ + E + G++P
Sbjct: 481 GLSKAL-GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 539
Query: 328 TNEM 331
+M
Sbjct: 540 YKKM 543
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 59/142 (41%), Gaps = 21/142 (14%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255
F+ ND +V E SL E LH R+AL L + YLH +
Sbjct: 84 FEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLR---QIVLGCQYLH---RNRV 136
Query: 256 VHCDLKPSNVLLDGELTAHVGDFGLA----------KFLPEATNNFFNFQIAEYGMGSEV 305
+H DLK N+ L+ +L +GDFGLA K L N +++ G EV
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 196
Query: 306 STSGDVYSFGILLLETFTGKRP 327
DV+S G ++ GK P
Sbjct: 197 ----DVWSIGCIMYTLLVGKPP 214
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 86/226 (38%), Gaps = 22/226 (9%)
Query: 109 PLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGI 168
P P L DI E +G + G R+ + NF + + S +
Sbjct: 145 PQPVEIKHDHVLDHYDIHEELGTG----AFGVVHRVTERATGNNFAAKFVMTPHESDKET 200
Query: 169 ENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNL 228
++ + +RH LV + + F+ ++ ++YEFM G L E + +
Sbjct: 201 VRKEIQTMSVLRHPTLVNLHDA-----FEDDNEMVMIYEFMSGGELFEKVADEHNKMSED 255
Query: 229 NLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVG--DFGLAKFLP- 285
++ + V L ++H E VH DLKP N++ + + + DFGL L
Sbjct: 256 EAVEYMR---QVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 309
Query: 286 ----EATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
+ T F E G V D++S G+L +G P
Sbjct: 310 KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 355
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 16/152 (10%)
Query: 191 CASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHY 250
C S F D + + + M G L H ++ + + A ++ L+++H+
Sbjct: 255 CMSYAFHTPDKLSFILDLMNGGDLH--YHLSQHGV--FSEADMRFYAAEIILGLEHMHNR 310
Query: 251 CETPIVHCDLKPSNVLLDGELTAHVGDFGLA----KFLPEA---TNNFFNFQIAEYGMGS 303
+V+ DLKP+N+LLD + D GLA K P A T+ + ++ + G+
Sbjct: 311 F---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAY 367
Query: 304 EVSTSGDVYSFGILLLETFTGKRPTNEMFTGN 335
+ +S D +S G +L + G P + T +
Sbjct: 368 D--SSADWFSLGCMLFKLLRGHSPFRQHKTKD 397
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 16/130 (12%)
Query: 229 NLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT 288
+L ++++A+ AL YL + ++H D+KPSN+LLD + DFG++ L +
Sbjct: 124 RILGKMTVAI--VKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179
Query: 289 NNFFNFQIAEYGMGSE-----------VSTSGDVYSFGILLLETFTGKRPTNEMFTGNLT 337
+ A Y M E DV+S GI L+E TG+ P T
Sbjct: 180 AKDRSAGCAAY-MAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEV 238
Query: 338 LHNFVKEALP 347
L ++E P
Sbjct: 239 LTKVLQEEPP 248
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 16/152 (10%)
Query: 191 CASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHY 250
C S F D + + + M G L H ++ + + A ++ L+++H+
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLH--YHLSQHGV--FSEADMRFYAAEIILGLEHMHNR 311
Query: 251 CETPIVHCDLKPSNVLLDGELTAHVGDFGLA----KFLPEA---TNNFFNFQIAEYGMGS 303
+V+ DLKP+N+LLD + D GLA K P A T+ + ++ + G+
Sbjct: 312 F---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAY 368
Query: 304 EVSTSGDVYSFGILLLETFTGKRPTNEMFTGN 335
+ +S D +S G +L + G P + T +
Sbjct: 369 D--SSADWFSLGCMLFKLLRGHSPFRQHKTKD 398
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 16/152 (10%)
Query: 191 CASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHY 250
C S F D + + + M G L H ++ + + A ++ L+++H+
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLH--YHLSQHGV--FSEADMRFYAAEIILGLEHMHNR 311
Query: 251 CETPIVHCDLKPSNVLLDGELTAHVGDFGLA----KFLPEA---TNNFFNFQIAEYGMGS 303
+V+ DLKP+N+LLD + D GLA K P A T+ + ++ + G+
Sbjct: 312 F---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAY 368
Query: 304 EVSTSGDVYSFGILLLETFTGKRPTNEMFTGN 335
+ +S D +S G +L + G P + T +
Sbjct: 369 D--SSADWFSLGCMLFKLLRGHSPFRQHKTKD 398
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 16/152 (10%)
Query: 191 CASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHY 250
C S F D + + + M G L H ++ + + A ++ L+++H+
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLH--YHLSQHGV--FSEADMRFYAAEIILGLEHMHNR 311
Query: 251 CETPIVHCDLKPSNVLLDGELTAHVGDFGLA----KFLPEA---TNNFFNFQIAEYGMGS 303
+V+ DLKP+N+LLD + D GLA K P A T+ + ++ + G+
Sbjct: 312 F---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAY 368
Query: 304 EVSTSGDVYSFGILLLETFTGKRPTNEMFTGN 335
+ +S D +S G +L + G P + T +
Sbjct: 369 D--SSADWFSLGCMLFKLLRGHSPFRQHKTKD 398
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 59/142 (41%), Gaps = 21/142 (14%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255
F+ ND +V E SL E LH R+AL L + YLH +
Sbjct: 108 FEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLR---QIVLGCQYLH---RNRV 160
Query: 256 VHCDLKPSNVLLDGELTAHVGDFGLA----------KFLPEATNNFFNFQIAEYGMGSEV 305
+H DLK N+ L+ +L +GDFGLA K L N +++ G EV
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 220
Query: 306 STSGDVYSFGILLLETFTGKRP 327
DV+S G ++ GK P
Sbjct: 221 ----DVWSIGCIMYTLLVGKPP 238
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 22/159 (13%)
Query: 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS 235
+ +RH N++++ F L+ E+ G + + L + L + + +
Sbjct: 67 QSHLRHPNILRLYGY-----FHDATRVYLILEYAPRGEVYKEL----QKLSKFDEQRTAT 117
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA-------T 288
++A+AL Y H ++H D+KP N+LL + DFG + P + T
Sbjct: 118 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 174
Query: 289 NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
++ ++ E M E D++S G+L E GK P
Sbjct: 175 LDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVGKPP 210
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 46/101 (45%), Gaps = 23/101 (22%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL-------------PE 286
+ SA+ Y H + IVH DLK N+LLDG++ + DFG + P
Sbjct: 123 IVSAVQYCH---QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPY 179
Query: 287 ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
A FQ +Y G EV DV+S G++L +G P
Sbjct: 180 AAPEL--FQGKKYD-GPEV----DVWSLGVILYTLVSGSLP 213
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 59/142 (41%), Gaps = 21/142 (14%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255
F+ ND +V E SL E LH R+AL L + YLH +
Sbjct: 110 FEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLR---QIVLGCQYLH---RNRV 162
Query: 256 VHCDLKPSNVLLDGELTAHVGDFGLA----------KFLPEATNNFFNFQIAEYGMGSEV 305
+H DLK N+ L+ +L +GDFGLA K L N +++ G EV
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 222
Query: 306 STSGDVYSFGILLLETFTGKRP 327
DV+S G ++ GK P
Sbjct: 223 ----DVWSIGCIMYTLLVGKPP 240
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 22/169 (13%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
++H N+V+ S F+ N S +V ++ G L + ++ + L + Q L V
Sbjct: 80 MKHPNIVQYRES-----FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQED--QILDWFV 132
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPE---------ATN 289
+ AL ++H + I+H D+K N+ L + T +GDFG+A+ L T
Sbjct: 133 QICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTP 189
Query: 290 NFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTL 338
+ + +I E + D+++ G +L E T K NL L
Sbjct: 190 YYLSPEICE---NKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVL 235
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 19/135 (14%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLL------QRLSIAVDVASALDYLHHYCETPIVH 257
++ E M G L+ +L R ++N +L + + +A ++A + YL+ VH
Sbjct: 92 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVH 148
Query: 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF---------FNFQIAEYGMGSEVSTS 308
DL N + + T +GDFG+ + + E T+ + + E +T
Sbjct: 149 RDLAARNCXVAEDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTY 207
Query: 309 GDVYSFGILLLETFT 323
DV+SFG++L E T
Sbjct: 208 SDVWSFGVVLWEIAT 222
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 91/206 (44%), Gaps = 28/206 (13%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
++ EF+ G+L + + R LN Q ++ V AL YLH ++H D+K
Sbjct: 119 VLMEFLQGGALTDIVSQVR-----LNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSD 170
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYGMGSEV------STSGDVYSFGIL 317
++LL + + DFG + + Y M EV +T D++S GI+
Sbjct: 171 SILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIM 230
Query: 318 LLETFTGKRPTNEMFTGN-LTLHNFVKEALPERL--AEIVDPVL--LVER------EEGE 366
++E G+ P F+ + + ++++ P +L + V PVL +ER +E
Sbjct: 231 VIEMVDGEPP---YFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERA 287
Query: 367 TSKANAHKQFTRSFSVKECLVSVLGI 392
T++ F + ECLV ++ +
Sbjct: 288 TAQELLDHPFLLQTGLPECLVPLIQL 313
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA---TNNFF---N 293
+ S L++LH + I++ DLKP NVLLD + + D GLA L T +
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 294 FQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
F E +G E S D ++ G+ L E + P
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA---TNNFF---N 293
+ S L++LH + I++ DLKP NVLLD + + D GLA L T +
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 294 FQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
F E +G E S D ++ G+ L E + P
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA---TNNFF---N 293
+ S L++LH + I++ DLKP NVLLD + + D GLA L T +
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 294 FQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
F E +G E S D ++ G+ L E + P
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA---TNNFF---N 293
+ S L++LH + I++ DLKP NVLLD + + D GLA L T +
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 294 FQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
F E +G E S D ++ G+ L E + P
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 86/226 (38%), Gaps = 22/226 (9%)
Query: 109 PLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGI 168
P P L DI E +G + G R+ + NF + + S +
Sbjct: 39 PQPVEIKHDHVLDHYDIHEELGTG----AFGVVHRVTERATGNNFAAKFVMTPHESDKET 94
Query: 169 ENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNL 228
++ + +RH LV + + F+ ++ ++YEFM G L E + +
Sbjct: 95 VRKEIQTMSVLRHPTLVNLHDA-----FEDDNEMVMIYEFMSGGELFEKVADEHNKMSED 149
Query: 229 NLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVG--DFGLAKFLP- 285
++ + V L ++H E VH DLKP N++ + + + DFGL L
Sbjct: 150 EAVEYMR---QVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 203
Query: 286 ----EATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
+ T F E G V D++S G+L +G P
Sbjct: 204 KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 249
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 9/103 (8%)
Query: 235 SIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNF 294
+I ++ LDYLH + +H D+K +NVLL + + DFG+A L + F
Sbjct: 120 TILREILKGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXF 176
Query: 295 QIAEYGMGSEV------STSGDVYSFGILLLETFTGKRPTNEM 331
+ M EV D++S GI +E G+ P +++
Sbjct: 177 VGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDL 219
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 17/108 (15%)
Query: 178 FIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQR---L 234
++ RN VK +T+ + + + E+ N +L + +H +NLN QR
Sbjct: 71 WLERRNFVKPMTAV-----KKKSTLFIQMEYCENRTLYDLIHS-----ENLNQ-QRDEYW 119
Query: 235 SIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK 282
+ + AL Y+H I+H DLKP N+ +D +GDFGLAK
Sbjct: 120 RLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 15/135 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
L+ + M G L +++ RE N+ L+ V +A ++YL + +VH DL
Sbjct: 100 LIMQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAAR 153
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFG 315
NVL+ + DFGLAK L + + E + + DV+S+G
Sbjct: 154 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 213
Query: 316 ILLLETFT-GKRPTN 329
+ + E T G +P +
Sbjct: 214 VTVWELMTFGSKPYD 228
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 16/135 (11%)
Query: 200 DSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259
D +V E++ GSL + + ++ Q ++ + AL++LH ++H D
Sbjct: 91 DELWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHS---NQVIHRD 142
Query: 260 LKPSNVLLDGELTAHVGDFGL-AKFLPEATNNFFNFQIAEYGMGSEVSTSG------DVY 312
+K N+LL + + + DFG A+ PE + Y M EV T D++
Sbjct: 143 IKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTP-YWMAPEVVTRKAYGPKVDIW 201
Query: 313 SFGILLLETFTGKRP 327
S GI+ +E G+ P
Sbjct: 202 SLGIMAIEMIEGEPP 216
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 16/135 (11%)
Query: 200 DSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259
D +V E++ GSL + + ++ Q ++ + AL++LH ++H D
Sbjct: 90 DELWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHS---NQVIHRD 141
Query: 260 LKPSNVLLDGELTAHVGDFGL-AKFLPEATNNFFNFQIAEYGMGSEVSTSG------DVY 312
+K N+LL + + + DFG A+ PE + Y M EV T D++
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTP-YWMAPEVVTRKAYGPKVDIW 200
Query: 313 SFGILLLETFTGKRP 327
S GI+ +E G+ P
Sbjct: 201 SLGIMAIEMIEGEPP 215
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 15/135 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
L+ + M G L +++ RE N+ L+ V +A ++YL + +VH DL
Sbjct: 96 LIMQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAAR 149
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFG 315
NVL+ + DFGLAK L + + E + + DV+S+G
Sbjct: 150 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 209
Query: 316 ILLLETFT-GKRPTN 329
+ + E T G +P +
Sbjct: 210 VTVWELMTFGSKPYD 224
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 23/178 (12%)
Query: 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVD 239
+H N+V++ S + D +V EF+ G+L + + R +N Q ++ +
Sbjct: 206 QHENVVEMYNS-----YLVGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIAAVCLA 255
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEY 299
V AL LH ++H D+K ++LL + + DFG + + Y
Sbjct: 256 VLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY 312
Query: 300 GMGSEV------STSGDVYSFGILLLETFTGKRPT-NEMFTGNLTLHNFVKEALPERL 350
M E+ D++S GI+++E G+ P NE L +++ LP RL
Sbjct: 313 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---PPLKAMKMIRDNLPPRL 367
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 18/116 (15%)
Query: 225 LKNLNLLQRLSIAVDVASALDYL--------HHYCETPIVHCDLKPSNVLLDGELTAHVG 276
L + NL Q + + +D + YL H I+H DLKPSN+++ + T +
Sbjct: 110 LMDANLCQVIQMELD-HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 168
Query: 277 DFGLAK-----FL--PEATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGK 325
DFGLA+ F+ PE ++ GMG + + D++S G ++ E K
Sbjct: 169 DFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMVCHK 222
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 22/159 (13%)
Query: 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS 235
+ +RH N++++ F L+ E+ G + + L + L + + +
Sbjct: 67 QSHLRHPNILRLYGY-----FHDATRVYLILEYAPRGEVYKEL----QKLSKFDEQRTAT 117
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA-------T 288
++A+AL Y H ++H D+KP N+LL + DFG + P + T
Sbjct: 118 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGT 174
Query: 289 NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
++ ++ E M E D++S G+L E GK P
Sbjct: 175 LDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVGKPP 210
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 65/158 (41%), Gaps = 27/158 (17%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+V++ C LV+E V+ L +L E ++ + +
Sbjct: 73 HPNVVRLFDVCTVSRTDRETKLTLVFEH-VDQDLTTYLDKVPEPGVPTETIK--DMMFQL 129
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIA--- 297
LD+LH + +VH DLKP N+L+ + DFGLA+ ++FQ+A
Sbjct: 130 LRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLAR--------IYSFQMALTS 178
Query: 298 ----------EYGMGSEVSTSGDVYSFGILLLETFTGK 325
E + S +T D++S G + E F K
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 15/135 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
L+ + M G L +++ RE N+ L+ V +A ++YL + +VH DL
Sbjct: 93 LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAAR 146
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFG 315
NVL+ + DFGLAK L + + E + + DV+S+G
Sbjct: 147 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 206
Query: 316 ILLLETFT-GKRPTN 329
+ + E T G +P +
Sbjct: 207 VTVWELMTFGSKPYD 221
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 15/135 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
L+ + M G L +++ RE N+ L+ V +A ++YL + +VH DL
Sbjct: 93 LIMQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAAR 146
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFG 315
NVL+ + DFGLAK L + + E + + DV+S+G
Sbjct: 147 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 206
Query: 316 ILLLETFT-GKRPTN 329
+ + E T G +P +
Sbjct: 207 VTVWELMTFGSKPYD 221
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 23/178 (12%)
Query: 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVD 239
+H N+V++ S + D +V EF+ G+L + + R +N Q ++ +
Sbjct: 129 QHENVVEMYNS-----YLVGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIAAVCLA 178
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEY 299
V AL LH ++H D+K ++LL + + DFG + + Y
Sbjct: 179 VLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY 235
Query: 300 GMGSEV------STSGDVYSFGILLLETFTGKRPT-NEMFTGNLTLHNFVKEALPERL 350
M E+ D++S GI+++E G+ P NE L +++ LP RL
Sbjct: 236 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---PPLKAMKMIRDNLPPRL 290
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 15/135 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
L+ + M G L +++ RE N+ L+ V +A ++YL + +VH DL
Sbjct: 94 LIMQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAAR 147
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFG 315
NVL+ + DFGLAK L + + E + + DV+S+G
Sbjct: 148 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 207
Query: 316 ILLLETFT-GKRPTN 329
+ + E T G +P +
Sbjct: 208 VTVWELMTFGSKPYD 222
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 15/135 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
L+ + M G L +++ RE N+ L+ V +A ++YL + +VH DL
Sbjct: 95 LIMQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAAR 148
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFG 315
NVL+ + DFGLAK L + + E + + DV+S+G
Sbjct: 149 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 208
Query: 316 ILLLETFT-GKRPTN 329
+ + E T G +P +
Sbjct: 209 VTVWELMTFGSKPYD 223
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 59/142 (41%), Gaps = 21/142 (14%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255
F+ ND +V E SL E LH R+AL L + YLH +
Sbjct: 86 FEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLR---QIVLGCQYLH---RNRV 138
Query: 256 VHCDLKPSNVLLDGELTAHVGDFGLA----------KFLPEATNNFFNFQIAEYGMGSEV 305
+H DLK N+ L+ +L +GDFGLA K L N +++ G EV
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEV 198
Query: 306 STSGDVYSFGILLLETFTGKRP 327
DV+S G ++ GK P
Sbjct: 199 ----DVWSIGCIMYTLLVGKPP 216
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 15/135 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
L+ + M G L +++ RE N+ L+ V +A ++YL + +VH DL
Sbjct: 94 LIMQLMPFGXLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAAR 147
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFG 315
NVL+ + DFGLAK L + + E + + DV+S+G
Sbjct: 148 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 207
Query: 316 ILLLETFT-GKRPTN 329
+ + E T G +P +
Sbjct: 208 VTVWELMTFGSKPYD 222
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 65/158 (41%), Gaps = 27/158 (17%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+V++ C LV+E V+ L +L E ++ + +
Sbjct: 73 HPNVVRLFDVCTVSRTDRETKLTLVFEH-VDQDLTTYLDKVPEPGVPTETIK--DMMFQL 129
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIA--- 297
LD+LH + +VH DLKP N+L+ + DFGLA+ ++FQ+A
Sbjct: 130 LRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLAR--------IYSFQMALTS 178
Query: 298 ----------EYGMGSEVSTSGDVYSFGILLLETFTGK 325
E + S +T D++S G + E F K
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 59/142 (41%), Gaps = 21/142 (14%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255
F+ ND +V E SL E LH R+AL L + YLH +
Sbjct: 86 FEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLR---QIVLGCQYLH---RNRV 138
Query: 256 VHCDLKPSNVLLDGELTAHVGDFGLA----------KFLPEATNNFFNFQIAEYGMGSEV 305
+H DLK N+ L+ +L +GDFGLA K L N +++ G EV
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEV 198
Query: 306 STSGDVYSFGILLLETFTGKRP 327
DV+S G ++ GK P
Sbjct: 199 ----DVWSIGCIMYTLLVGKPP 216
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 59/142 (41%), Gaps = 21/142 (14%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255
F+ ND +V E SL E LH R+AL L + YLH +
Sbjct: 90 FEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLR---QIVLGCQYLH---RNRV 142
Query: 256 VHCDLKPSNVLLDGELTAHVGDFGLA----------KFLPEATNNFFNFQIAEYGMGSEV 305
+H DLK N+ L+ +L +GDFGLA K L N +++ G EV
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEV 202
Query: 306 STSGDVYSFGILLLETFTGKRP 327
DV+S G ++ GK P
Sbjct: 203 ----DVWSIGCIMYTLLVGKPP 220
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 15/135 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
L+ + M G L +++ RE N+ L+ V +A ++YL + +VH DL
Sbjct: 97 LIMQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAAR 150
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFG 315
NVL+ + DFGLAK L + + E + + DV+S+G
Sbjct: 151 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 210
Query: 316 ILLLETFT-GKRPTN 329
+ + E T G +P +
Sbjct: 211 VTVWELMTFGSKPYD 225
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 15/135 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
L+ + M G L +++ RE N+ L+ V +A ++YL + +VH DL
Sbjct: 127 LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAAR 180
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFG 315
NVL+ + DFGLAK L + + E + + DV+S+G
Sbjct: 181 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 240
Query: 316 ILLLETFT-GKRPTN 329
+ + E T G +P +
Sbjct: 241 VTVWELMTFGSKPYD 255
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 23/178 (12%)
Query: 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVD 239
+H N+V++ S + D +V EF+ G+L + + R +N Q ++ +
Sbjct: 86 QHENVVEMYNS-----YLVGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIAAVCLA 135
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEY 299
V AL LH ++H D+K ++LL + + DFG + + Y
Sbjct: 136 VLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY 192
Query: 300 GMGSEV------STSGDVYSFGILLLETFTGKRPT-NEMFTGNLTLHNFVKEALPERL 350
M E+ D++S GI+++E G+ P NE L +++ LP RL
Sbjct: 193 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---PPLKAMKMIRDNLPPRL 247
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 66/162 (40%), Gaps = 26/162 (16%)
Query: 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVD 239
+H N+V ++ +C ++ E+ G L +L R + L +IA
Sbjct: 108 QHENIVNLLGACTH-----GGPVLVITEYCCYGDLLNFL---RRKSRVLETDPAFAIANS 159
Query: 240 VASALDYLHHYCETP----------IVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATN 289
S D LH + +H D+ NVLL A +GDFGLA+ + +N
Sbjct: 160 TLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 219
Query: 290 NFF--NFQIAEYGMGSE------VSTSGDVYSFGILLLETFT 323
N ++ M E + DV+S+GILL E F+
Sbjct: 220 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 69/159 (43%), Gaps = 22/159 (13%)
Query: 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS 235
+ +RH N++++ F + L+ E+ G++ L + L + + +
Sbjct: 62 QSHLRHPNILRLYGY-----FHDSTRVYLILEYAPLGTVYREL----QKLSKFDEQRTAT 112
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA-------T 288
++A+AL Y H ++H D+KP N+LL + DFG + P + T
Sbjct: 113 YITELANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGT 169
Query: 289 NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
++ ++ E M E D++S G+L E GK P
Sbjct: 170 LDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVGKPP 205
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 16/135 (11%)
Query: 200 DSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259
D +V E++ GSL + + ++ Q ++ + AL++LH ++H D
Sbjct: 90 DELWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHS---NQVIHRD 141
Query: 260 LKPSNVLLDGELTAHVGDFGL-AKFLPEATNNFFNFQIAEYGMGSEVSTSG------DVY 312
+K N+LL + + + DFG A+ PE + Y M EV T D++
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITPEQSKR-STMVGTPYWMAPEVVTRKAYGPKVDIW 200
Query: 313 SFGILLLETFTGKRP 327
S GI+ +E G+ P
Sbjct: 201 SLGIMAIEMIEGEPP 215
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 235 SIAVDVASALDYLHHYCETPIVHCDLKPSNVLL--DGELTAHVGDFGLAKFLPEATNNFF 292
A + LD LH + I+HCDLKP N+LL G V DFG + + +
Sbjct: 204 KFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXI 260
Query: 293 N---FQIAEYGMGSEVSTSGDVYSFGILLLETFTG 324
++ E +G+ D++S G +L E TG
Sbjct: 261 QSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 16/135 (11%)
Query: 200 DSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259
D +V E++ GSL + + ++ Q ++ + AL++LH ++H D
Sbjct: 90 DELWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHS---NQVIHRD 141
Query: 260 LKPSNVLLDGELTAHVGDFGL-AKFLPEATNNFFNFQIAEYGMGSEVSTSG------DVY 312
+K N+LL + + + DFG A+ PE + Y M EV T D++
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITPEQSKR-SEMVGTPYWMAPEVVTRKAYGPKVDIW 200
Query: 313 SFGILLLETFTGKRP 327
S GI+ +E G+ P
Sbjct: 201 SLGIMAIEMIEGEPP 215
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 235 SIAVDVASALDYLHHYCETPIVHCDLKPSNVLL--DGELTAHVGDFGLAKFLPEATNNFF 292
A + LD LH + I+HCDLKP N+LL G V DFG + + +
Sbjct: 204 KFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXI 260
Query: 293 N---FQIAEYGMGSEVSTSGDVYSFGILLLETFTG 324
++ E +G+ D++S G +L E TG
Sbjct: 261 QSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 23/178 (12%)
Query: 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVD 239
+H N+V++ S + D +V EF+ G+L + + R +N Q ++ +
Sbjct: 84 QHENVVEMYNS-----YLVGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIAAVCLA 133
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEY 299
V AL LH ++H D+K ++LL + + DFG + + Y
Sbjct: 134 VLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY 190
Query: 300 GMGSEV------STSGDVYSFGILLLETFTGKRPT-NEMFTGNLTLHNFVKEALPERL 350
M E+ D++S GI+++E G+ P NE L +++ LP RL
Sbjct: 191 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---PPLKAMKMIRDNLPPRL 245
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 15/135 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
L+ + M G L +++ RE N+ L+ V +A ++YL + +VH DL
Sbjct: 103 LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAAR 156
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFG 315
NVL+ + DFGLAK L + + E + + DV+S+G
Sbjct: 157 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 216
Query: 316 ILLLETFT-GKRPTN 329
+ + E T G +P +
Sbjct: 217 VTVWELMTFGSKPYD 231
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 15/135 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
L+ + M G L +++ RE N+ L+ V +A ++YL + +VH DL
Sbjct: 100 LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAAR 153
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFG 315
NVL+ + DFGLAK L + + E + + DV+S+G
Sbjct: 154 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 213
Query: 316 ILLLETFT-GKRPTN 329
+ + E T G +P +
Sbjct: 214 VTVWELMTFGSKPYD 228
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 23/178 (12%)
Query: 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVD 239
+H N+V++ S + D +V EF+ G+L + + R +N Q ++ +
Sbjct: 75 QHENVVEMYNS-----YLVGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIAAVCLA 124
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEY 299
V AL LH ++H D+K ++LL + + DFG + + Y
Sbjct: 125 VLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY 181
Query: 300 GMGSEV------STSGDVYSFGILLLETFTGKRPT-NEMFTGNLTLHNFVKEALPERL 350
M E+ D++S GI+++E G+ P NE L +++ LP RL
Sbjct: 182 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---PPLKAMKMIRDNLPPRL 236
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 65/158 (41%), Gaps = 27/158 (17%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+V++ C LV+E V+ L +L E ++ + +
Sbjct: 73 HPNVVRLFDVCTVSRTDRETKLTLVFEH-VDQDLTTYLDKVPEPGVPTETIK--DMMFQL 129
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIA--- 297
LD+LH + +VH DLKP N+L+ + DFGLA+ ++FQ+A
Sbjct: 130 LRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLAR--------IYSFQMALTS 178
Query: 298 ----------EYGMGSEVSTSGDVYSFGILLLETFTGK 325
E + S +T D++S G + E F K
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 18/159 (11%)
Query: 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVN-------GSLEEWLHPNREALKNLNLLQ 232
+H N+V ++ +C +E Y ++N LE +P+ + L+
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRD 167
Query: 233 RLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF 292
L + VA + +L +H D+ NVLL A +GDFGLA+ + +N
Sbjct: 168 LLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 224
Query: 293 --NFQIAEYGMGSE------VSTSGDVYSFGILLLETFT 323
N ++ M E + DV+S+GILL E F+
Sbjct: 225 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 15/135 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
L+ + M G L +++ RE N+ L+ V +A ++YL + +VH DL
Sbjct: 96 LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAAR 149
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFG 315
NVL+ + DFGLAK L + + E + + DV+S+G
Sbjct: 150 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 209
Query: 316 ILLLETFT-GKRPTN 329
+ + E T G +P +
Sbjct: 210 VTVWELMTFGSKPYD 224
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 235 SIAVDVASALDYLHHYCETPIVHCDLKPSNVLL--DGELTAHVGDFGLAKFLPEATNNFF 292
A + LD LH + I+HCDLKP N+LL G V DFG + + +
Sbjct: 204 KFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXI 260
Query: 293 N---FQIAEYGMGSEVSTSGDVYSFGILLLETFTG 324
++ E +G+ D++S G +L E TG
Sbjct: 261 QSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 23/178 (12%)
Query: 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVD 239
+H N+V++ S + D +V EF+ G+L + + R +N Q ++ +
Sbjct: 79 QHENVVEMYNS-----YLVGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIAAVCLA 128
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEY 299
V AL LH ++H D+K ++LL + + DFG + + Y
Sbjct: 129 VLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY 185
Query: 300 GMGSEV------STSGDVYSFGILLLETFTGKRPT-NEMFTGNLTLHNFVKEALPERL 350
M E+ D++S GI+++E G+ P NE L +++ LP RL
Sbjct: 186 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---PPLKAMKMIRDNLPPRL 240
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 15/135 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
L+ + M G L +++ RE N+ L+ V +A ++YL + +VH DL
Sbjct: 93 LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAAR 146
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFG 315
NVL+ + DFGLAK L + + E + + DV+S+G
Sbjct: 147 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 206
Query: 316 ILLLETFT-GKRPTN 329
+ + E T G +P +
Sbjct: 207 VTVWELMTFGSKPYD 221
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 15/135 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
L+ + M G L +++ RE N+ L+ V +A ++YL + +VH DL
Sbjct: 95 LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAAR 148
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFG 315
NVL+ + DFGLAK L + + E + + DV+S+G
Sbjct: 149 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 208
Query: 316 ILLLETFT-GKRPTN 329
+ + E T G +P +
Sbjct: 209 VTVWELMTFGSKPYD 223
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 15/135 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
L+ + M G L +++ RE N+ L+ V +A ++YL + +VH DL
Sbjct: 100 LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAAR 153
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFG 315
NVL+ + DFGLAK L + + E + + DV+S+G
Sbjct: 154 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 213
Query: 316 ILLLETFT-GKRPTN 329
+ + E T G +P +
Sbjct: 214 VTVWELMTFGSKPYD 228
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 15/135 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
L+ + M G L +++ RE N+ L+ V +A ++YL + +VH DL
Sbjct: 96 LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAAR 149
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFG 315
NVL+ + DFGLAK L + + E + + DV+S+G
Sbjct: 150 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 209
Query: 316 ILLLETFT-GKRPTN 329
+ + E T G +P +
Sbjct: 210 VTVWELMTFGSKPYD 224
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 15/135 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
L+ + M G L +++ RE N+ L+ V +A ++YL + +VH DL
Sbjct: 87 LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAAR 140
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFG 315
NVL+ + DFGLAK L + + E + + DV+S+G
Sbjct: 141 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 200
Query: 316 ILLLETFT-GKRPTN 329
+ + E T G +P +
Sbjct: 201 VTVWELMTFGSKPYD 215
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 15/135 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
L+ + M G L +++ RE N+ L+ V +A ++YL + +VH DL
Sbjct: 93 LITQLMPFGXLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAAR 146
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFG 315
NVL+ + DFGLAK L + + E + + DV+S+G
Sbjct: 147 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 206
Query: 316 ILLLETFT-GKRPTN 329
+ + E T G +P +
Sbjct: 207 VTVWELMTFGSKPYD 221
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 242 SALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYGM 301
L+YLH + I+H DLKP+N+LLD + DFGLAK + + + +
Sbjct: 123 QGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYR 179
Query: 302 GSEVSTSGDVYSFGI 316
E+ +Y G+
Sbjct: 180 APELLFGARMYGVGV 194
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 18/115 (15%)
Query: 225 LKNLNLLQRLSIAVDVASALDYL--------HHYCETPIVHCDLKPSNVLLDGELTAHVG 276
L + NL Q + + +D + YL H I+H DLKPSN+++ + T +
Sbjct: 112 LMDANLCQVIQMELD-HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 170
Query: 277 DFGLAK-------FLPEATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTG 324
DFGLA+ +P ++ GMG + + D++S G ++ E G
Sbjct: 171 DFGLARTAGTSFMMVPFVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMIKG 223
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 65/156 (41%), Gaps = 16/156 (10%)
Query: 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS 235
+ +RH N++++ F L+ E+ G++ L + L + + +
Sbjct: 88 QSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTAT 138
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNN----F 291
++A+AL Y H ++H D+KP N+LL + DFG + P + +
Sbjct: 139 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGT 195
Query: 292 FNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
++ E G D++S G+L E GK P
Sbjct: 196 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 15/135 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
L+ + M G L +++ RE N+ L+ V +A ++YL + +VH DL
Sbjct: 99 LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAAR 152
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFG 315
NVL+ + DFGLAK L + + E + + DV+S+G
Sbjct: 153 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 212
Query: 316 ILLLETFT-GKRPTN 329
+ + E T G +P +
Sbjct: 213 VTVWELMTFGSKPYD 227
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 15/135 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
L+ + M G L +++ RE N+ L+ V +A ++YL + +VH DL
Sbjct: 93 LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAAR 146
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFG 315
NVL+ + DFGLAK L + + E + + DV+S+G
Sbjct: 147 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 206
Query: 316 ILLLETFT-GKRPTN 329
+ + E T G +P +
Sbjct: 207 VTVWELMTFGSKPYD 221
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 15/135 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
L+ + M G L +++ RE N+ L+ V +A ++YL + +VH DL
Sbjct: 96 LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAAR 149
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFG 315
NVL+ + DFGLAK L + + E + + DV+S+G
Sbjct: 150 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 209
Query: 316 ILLLETFT-GKRPTN 329
+ + E T G +P +
Sbjct: 210 VTVWELMTFGSKPYD 224
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 100/222 (45%), Gaps = 38/222 (17%)
Query: 121 GAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180
G + + NKL+G++ + L+++ ++ +PS+ I + L + +
Sbjct: 16 GVVYKARNKLTGEV-------VALKKIRLDTE--TEGVPST-----AIREISLLKE--LN 59
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + + LV+EF+ + L++++ + AL + L S +
Sbjct: 60 HPNIVKLLDVIHT-----ENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQL 111
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYG 300
L + H + ++H DLKP N+L++ E + DFGLA+ + + + +
Sbjct: 112 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 168
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGN 335
E+ ST+ D++S G + E T + +F G+
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 206
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 100/222 (45%), Gaps = 38/222 (17%)
Query: 121 GAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180
G + + NKL+G++ + L+++ ++ +PS+ I + L + +
Sbjct: 17 GVVYKARNKLTGEV-------VALKKIRLDTE--TEGVPST-----AIREISLLKE--LN 60
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + + LV+EF+ + L++++ + AL + L S +
Sbjct: 61 HPNIVKLLDVIHT-----ENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQL 112
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYG 300
L + H + ++H DLKP N+L++ E + DFGLA+ + + + +
Sbjct: 113 LQGLSFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 169
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGN 335
E+ ST+ D++S G + E T + +F G+
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 207
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 100/222 (45%), Gaps = 38/222 (17%)
Query: 121 GAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180
G + + NKL+G++ + L+++ ++ +PS+ I + L + +
Sbjct: 20 GVVYKARNKLTGEV-------VALKKIRLDTE--TEGVPST-----AIREISLLKE--LN 63
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + + LV+EF+ + L++++ + AL + L S +
Sbjct: 64 HPNIVKLLDVIHT-----ENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQL 115
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYG 300
L + H + ++H DLKP N+L++ E + DFGLA+ + + + +
Sbjct: 116 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGN 335
E+ ST+ D++S G + E T + +F G+
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 210
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 100/222 (45%), Gaps = 38/222 (17%)
Query: 121 GAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180
G + + NKL+G++ + L+++ ++ +PS+ I + L + +
Sbjct: 19 GVVYKARNKLTGEV-------VALKKIRLDTE--TEGVPST-----AIREISLLKE--LN 62
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + + LV+EF+ + L++++ + AL + L S +
Sbjct: 63 HPNIVKLLDVIHT-----ENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQL 114
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYG 300
L + H + ++H DLKP N+L++ E + DFGLA+ + + + +
Sbjct: 115 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 171
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGN 335
E+ ST+ D++S G + E T + +F G+
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 209
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 15/135 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
LV + M G L + + NR L + +LL + + +A + YL + +VH DL
Sbjct: 95 LVTQLMPYGCLLDHVRENRGRLGSQDLL---NWCMQIAKGMSYLE---DVRLVHRDLAAR 148
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFG 315
NVL+ + DFGLA+ L + + E + + DV+S+G
Sbjct: 149 NVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYG 208
Query: 316 ILLLETFT-GKRPTN 329
+ + E T G +P +
Sbjct: 209 VTVWELMTFGAKPYD 223
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 15/135 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
L+ + M G L +++ RE N+ L+ V +A ++YL + +VH DL
Sbjct: 118 LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAAR 171
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFG 315
NVL+ + DFGLAK L + + E + + DV+S+G
Sbjct: 172 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 231
Query: 316 ILLLETFT-GKRPTN 329
+ + E T G +P +
Sbjct: 232 VTVWELMTFGSKPYD 246
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 100/222 (45%), Gaps = 38/222 (17%)
Query: 121 GAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180
G + + NKL+G++ + L+++ ++ +PS+ I + L + +
Sbjct: 19 GVVYKARNKLTGEV-------VALKKIRLDTE--TEGVPST-----AIREISLLKE--LN 62
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + + LV+EF+ + L++++ + AL + L S +
Sbjct: 63 HPNIVKLLDVIHT-----ENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQL 114
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYG 300
L + H + ++H DLKP N+L++ E + DFGLA+ + + + +
Sbjct: 115 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 171
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGN 335
E+ ST+ D++S G + E T + +F G+
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 209
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 100/222 (45%), Gaps = 38/222 (17%)
Query: 121 GAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180
G + + NKL+G++ + L+++ ++ +PS+ I + L + +
Sbjct: 17 GVVYKARNKLTGEV-------VALKKIRLDTE--TEGVPST-----AIREISLLKE--LN 60
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + + LV+EF+ + L++++ + AL + L S +
Sbjct: 61 HPNIVKLLDVIHT-----ENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQL 112
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYG 300
L + H + ++H DLKP N+L++ E + DFGLA+ + + + +
Sbjct: 113 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 169
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGN 335
E+ ST+ D++S G + E T + +F G+
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 207
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 65/156 (41%), Gaps = 16/156 (10%)
Query: 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS 235
+ +RH N++++ F L+ E+ G++ L + L + + +
Sbjct: 63 QSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTAT 113
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNN----F 291
++A+AL Y H ++H D+KP N+LL + DFG + P + +
Sbjct: 114 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGT 170
Query: 292 FNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
++ E G D++S G+L E GK P
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 100/222 (45%), Gaps = 38/222 (17%)
Query: 121 GAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180
G + + NKL+G++ + L+++ ++ +PS+ I + L + +
Sbjct: 17 GVVYKARNKLTGEV-------VALKKIRLDTE--TEGVPST-----AIREISLLKE--LN 60
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + + LV+EF+ + L++++ + AL + L S +
Sbjct: 61 HPNIVKLLDVIHT-----ENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQL 112
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYG 300
L + H + ++H DLKP N+L++ E + DFGLA+ + + + +
Sbjct: 113 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 169
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGN 335
E+ ST+ D++S G + E T + +F G+
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 207
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 100/222 (45%), Gaps = 38/222 (17%)
Query: 121 GAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180
G + + NKL+G++ + L+++ ++ +PS+ I + L + +
Sbjct: 17 GVVYKARNKLTGEV-------VALKKIRLDTE--TEGVPST-----AIREISLLKE--LN 60
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + + LV+EF+ + L++++ + AL + L S +
Sbjct: 61 HPNIVKLLDVIHT-----ENKLYLVFEFL-HQDLKDFM--DASALTGIPLPLIKSYLFQL 112
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYG 300
L + H + ++H DLKP N+L++ E + DFGLA+ + + + +
Sbjct: 113 LQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 169
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGN 335
E+ ST+ D++S G + E T + +F G+
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 207
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 100/222 (45%), Gaps = 38/222 (17%)
Query: 121 GAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180
G + + NKL+G++ + L+++ ++ +PS+ I + L + +
Sbjct: 20 GVVYKARNKLTGEV-------VALKKIRLDTE--TEGVPST-----AIREISLLKE--LN 63
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + + LV+EF+ + L++++ + AL + L S +
Sbjct: 64 HPNIVKLLDVIHT-----ENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQL 115
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYG 300
L + H + ++H DLKP N+L++ E + DFGLA+ + + + +
Sbjct: 116 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGN 335
E+ ST+ D++S G + E T + +F G+
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 210
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 100/222 (45%), Gaps = 38/222 (17%)
Query: 121 GAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180
G + + NKL+G++ + L+++ ++ +PS+ I + L + +
Sbjct: 18 GVVYKARNKLTGEV-------VALKKIRLDTE--TEGVPST-----AIREISLLKE--LN 61
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + + LV+EF+ + L++++ + AL + L S +
Sbjct: 62 HPNIVKLLDVIHT-----ENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQL 113
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYG 300
L + H + ++H DLKP N+L++ E + DFGLA+ + + + +
Sbjct: 114 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 170
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGN 335
E+ ST+ D++S G + E T + +F G+
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 208
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 100/222 (45%), Gaps = 38/222 (17%)
Query: 121 GAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180
G + + NKL+G++ + L+++ ++ +PS+ I + L + +
Sbjct: 17 GVVYKARNKLTGEV-------VALKKIRLDTE--TEGVPST-----AIREISLLKE--LN 60
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + + LV+EF+ + L++++ + AL + L S +
Sbjct: 61 HPNIVKLLDVIHT-----ENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQL 112
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYG 300
L + H + ++H DLKP N+L++ E + DFGLA+ + + + +
Sbjct: 113 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 169
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGN 335
E+ ST+ D++S G + E T + +F G+
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 207
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 100/222 (45%), Gaps = 38/222 (17%)
Query: 121 GAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180
G + + NKL+G++ + L+++ ++ +PS+ I + L + +
Sbjct: 16 GVVYKARNKLTGEV-------VALKKIRLDTE--TEGVPST-----AIREISLLKE--LN 59
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + + LV+EF+ + L++++ + AL + L S +
Sbjct: 60 HPNIVKLLDVIHT-----ENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQL 111
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYG 300
L + H + ++H DLKP N+L++ E + DFGLA+ + + + +
Sbjct: 112 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 168
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGN 335
E+ ST+ D++S G + E T + +F G+
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 206
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 15/135 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
L+ + M G L +++ RE N+ L+ V +A ++YL + +VH DL
Sbjct: 90 LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAEGMNYLE---DRRLVHRDLAAR 143
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFG 315
NVL+ + DFGLAK L + + E + + DV+S+G
Sbjct: 144 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 203
Query: 316 ILLLETFT-GKRPTN 329
+ + E T G +P +
Sbjct: 204 VTVWELMTFGSKPYD 218
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 64/156 (41%), Gaps = 16/156 (10%)
Query: 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS 235
+ +RH N++++ F L+ E+ G++ L + L + + +
Sbjct: 67 QSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTAT 117
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNN----F 291
++A+AL Y H ++H D+KP N+LL + DFG + P +
Sbjct: 118 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 174
Query: 292 FNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
++ E G D++S G+L E GK P
Sbjct: 175 LDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 98/234 (41%), Gaps = 47/234 (20%)
Query: 109 PLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRL-EQLVMNGNFFRGNIPSSLSSL-R 166
P N+ +LK +G + ++ KL+ I + +R+ ++ +N SSL L R
Sbjct: 11 PHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNS--------SSLQKLFR 62
Query: 167 GIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALK 226
+ + + + H N+VK+ + + LV E+ G + ++L A
Sbjct: 63 EVRIMKV-----LNHPNIVKLFEVIET-----EKTLYLVMEYASGGEVFDYL----VAHG 108
Query: 227 NLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL-- 284
+ + + + SA+ Y H + IVH DLK N+LLD ++ + DFG +
Sbjct: 109 RMKEKEARAKFRQIVSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF 165
Query: 285 -----------PEATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
P A FQ +Y G EV DV+S G++L +G P
Sbjct: 166 GNKLDTFCGSPPYAAPEL--FQGKKYD-GPEV----DVWSLGVILYTLVSGSLP 212
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 65/156 (41%), Gaps = 16/156 (10%)
Query: 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS 235
+ +RH N++++ F L+ E+ G++ L + L + + +
Sbjct: 65 QSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTAT 115
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNN----F 291
++A+AL Y H ++H D+KP N+LL + DFG + P + +
Sbjct: 116 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGT 172
Query: 292 FNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
++ E G D++S G+L E GK P
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 100/222 (45%), Gaps = 38/222 (17%)
Query: 121 GAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180
G + + NKL+G++ + L+++ ++ +PS+ I + L + +
Sbjct: 18 GVVYKARNKLTGEV-------VALKKIRLDTE--TEGVPST-----AIREISLLKE--LN 61
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + + LV+EF+ + L++++ + AL + L S +
Sbjct: 62 HPNIVKLLDVIHT-----ENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQL 113
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYG 300
L + H + ++H DLKP N+L++ E + DFGLA+ + + + +
Sbjct: 114 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 170
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGN 335
E+ ST+ D++S G + E T + +F G+
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 208
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 100/222 (45%), Gaps = 38/222 (17%)
Query: 121 GAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180
G + + NKL+G++ + L+++ ++ +PS+ I + L + +
Sbjct: 21 GVVYKARNKLTGEV-------VALKKIRLDTE--TEGVPST-----AIREISLLKE--LN 64
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + + LV+EF+ + L++++ + AL + L S +
Sbjct: 65 HPNIVKLLDVIHT-----ENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQL 116
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYG 300
L + H + ++H DLKP N+L++ E + DFGLA+ + + + +
Sbjct: 117 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 173
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGN 335
E+ ST+ D++S G + E T + +F G+
Sbjct: 174 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 211
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 22/159 (13%)
Query: 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS 235
+ +RH N++++ F L+ E+ G++ L + L + + +
Sbjct: 62 QSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTAT 112
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA-------T 288
++A+AL Y H ++H D+KP N+LL + DFG + P + T
Sbjct: 113 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 169
Query: 289 NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
++ ++ E M E D++S G+L E GK P
Sbjct: 170 LDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVGKPP 205
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 14/99 (14%)
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK-FLPEATNNFFNF-QI 296
++ AL++LH + I++ D+K N+LLD + DFGL+K F+ + T ++F
Sbjct: 167 EIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGT 223
Query: 297 AEYGMGSEVSTSG--------DVYSFGILLLETFTGKRP 327
EY M ++ G D +S G+L+ E TG P
Sbjct: 224 IEY-MAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 100/222 (45%), Gaps = 38/222 (17%)
Query: 121 GAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180
G + + NKL+G++ + L+++ ++ +PS+ I + L + +
Sbjct: 24 GVVYKARNKLTGEV-------VALKKIRLDTE--TEGVPST-----AIREISLLKE--LN 67
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + + LV+EF+ + L++++ + AL + L S +
Sbjct: 68 HPNIVKLLDVIHT-----ENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQL 119
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYG 300
L + H + ++H DLKP N+L++ E + DFGLA+ + + + +
Sbjct: 120 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 176
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGN 335
E+ ST+ D++S G + E T + +F G+
Sbjct: 177 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 214
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 98/234 (41%), Gaps = 47/234 (20%)
Query: 109 PLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRL-EQLVMNGNFFRGNIPSSLSSL-R 166
P N+ +LK +G + ++ KL+ I + +R+ ++ +N SSL L R
Sbjct: 11 PHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNS--------SSLQKLFR 62
Query: 167 GIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALK 226
+ + + + H N+VK+ + + LV E+ G + ++L A
Sbjct: 63 EVRIMKV-----LNHPNIVKLFEVIET-----EKTLYLVMEYASGGEVFDYL----VAHG 108
Query: 227 NLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL-- 284
+ + + + SA+ Y H + IVH DLK N+LLD ++ + DFG +
Sbjct: 109 RMKEKEARAKFRQIVSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF 165
Query: 285 -----------PEATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
P A FQ +Y G EV DV+S G++L +G P
Sbjct: 166 GNKLDEFCGSPPYAAPEL--FQGKKYD-GPEV----DVWSLGVILYTLVSGSLP 212
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 100/222 (45%), Gaps = 38/222 (17%)
Query: 121 GAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180
G + + NKL+G++ + L+++ ++ +PS+ I + L + +
Sbjct: 20 GVVYKARNKLTGEV-------VALKKIRLDTE--TEGVPST-----AIREISLLKE--LN 63
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + + LV+EF+ + L++++ + AL + L S +
Sbjct: 64 HPNIVKLLDVIHT-----ENKLYLVFEFL-SMDLKDFM--DASALTGIPLPLIKSYLFQL 115
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYG 300
L + H + ++H DLKP N+L++ E + DFGLA+ + + + +
Sbjct: 116 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGN 335
E+ ST+ D++S G + E T + +F G+
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 210
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 247 LHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK-------FLPEATNNFFNFQIAEY 299
+ H I+H DLKPSN+++ + T + DFGLA+ P ++
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 300 GMGSEVSTSGDVYSFGILLLETFTG 324
GMG + + D++S G ++ E G
Sbjct: 199 GMGYKENV--DIWSVGCIMGEMIKG 221
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 100/222 (45%), Gaps = 38/222 (17%)
Query: 121 GAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180
G + + NKL+G++ + L+++ ++ +PS+ I + L + +
Sbjct: 16 GVVYKARNKLTGEV-------VALKKIRLDTE--TEGVPST-----AIREISLLKE--LN 59
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + + LV+EF+ + L++++ + AL + L S +
Sbjct: 60 HPNIVKLLDVIHT-----ENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQL 111
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYG 300
L + H + ++H DLKP N+L++ E + DFGLA+ + + + +
Sbjct: 112 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 168
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGN 335
E+ ST+ D++S G + E T + +F G+
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 206
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 100/222 (45%), Gaps = 38/222 (17%)
Query: 121 GAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180
G + + NKL+G++ + L+++ ++ +PS+ I + L + +
Sbjct: 24 GVVYKARNKLTGEV-------VALKKIRLDTE--TEGVPST-----AIREISLLKE--LN 67
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + + LV+EF+ + L++++ + AL + L S +
Sbjct: 68 HPNIVKLLDVIHT-----ENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQL 119
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYG 300
L + H + ++H DLKP N+L++ E + DFGLA+ + + + +
Sbjct: 120 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 176
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGN 335
E+ ST+ D++S G + E T + +F G+
Sbjct: 177 RAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 214
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 22/159 (13%)
Query: 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS 235
+ +RH N++++ F L+ E+ G++ L + L + + +
Sbjct: 62 QSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTAT 112
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA-------T 288
++A+AL Y H ++H D+KP N+LL + DFG + P + T
Sbjct: 113 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGT 169
Query: 289 NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
++ ++ E M E D++S G+L E GK P
Sbjct: 170 LDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVGKPP 205
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 22/159 (13%)
Query: 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS 235
+ +RH N++++ F L+ E+ G++ L + L + + +
Sbjct: 88 QSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTAT 138
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA-------T 288
++A+AL Y H ++H D+KP N+LL + DFG + P + T
Sbjct: 139 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 195
Query: 289 NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
++ ++ E M E D++S G+L E GK P
Sbjct: 196 LDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVGKPP 231
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 100/222 (45%), Gaps = 38/222 (17%)
Query: 121 GAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180
G + + NKL+G++ + L+++ ++ +PS+ I + L + +
Sbjct: 17 GVVYKARNKLTGEV-------VALKKIRLDTE--TEGVPST-----AIREISLLKE--LN 60
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + + LV+EF+ + L++++ + AL + L S +
Sbjct: 61 HPNIVKLLDVIHT-----ENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQL 112
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYG 300
L + H + ++H DLKP N+L++ E + DFGLA+ + + + +
Sbjct: 113 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 169
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGN 335
E+ ST+ D++S G + E T + +F G+
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 207
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 19/101 (18%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGEL----TAHVGDFGLAKFL---------PE 286
+ ++YLH +VH DLKPSN+L E + + DFG AK L P
Sbjct: 125 ITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPC 181
Query: 287 ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
T NF ++ E G + + D++S G+LL TG P
Sbjct: 182 YTANFVAPEVLE-RQGYDAAC--DIWSLGVLLYTMLTGYTP 219
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 19/101 (18%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGEL----TAHVGDFGLAKFL---------PE 286
+ ++YLH +VH DLKPSN+L E + + DFG AK L P
Sbjct: 125 ITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPC 181
Query: 287 ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
T NF ++ E G + + D++S G+LL TG P
Sbjct: 182 YTANFVAPEVLER-QGYDAAC--DIWSLGVLLYTXLTGYTP 219
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 100/222 (45%), Gaps = 38/222 (17%)
Query: 121 GAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180
G + + NKL+G++ + L+++ ++ +PS+ I + L + +
Sbjct: 16 GVVYKARNKLTGEV-------VALKKIRLDTE--TEGVPST-----AIREISLLKE--LN 59
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + + LV+EF+ + L++++ + AL + L S +
Sbjct: 60 HPNIVKLLDVIHT-----ENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQL 111
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYG 300
L + H + ++H DLKP N+L++ E + DFGLA+ + + + +
Sbjct: 112 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 168
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGN 335
E+ ST+ D++S G + E T + +F G+
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 206
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 18/115 (15%)
Query: 225 LKNLNLLQRLSIAVDVASALDYL--------HHYCETPIVHCDLKPSNVLLDGELTAHVG 276
L + NL Q + + +D + YL H I+H DLKPSN+++ + T +
Sbjct: 111 LMDANLCQVIQMELD-HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 169
Query: 277 DFGLAK-------FLPEATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTG 324
DFGLA+ P ++ GMG + + D++S G ++ E G
Sbjct: 170 DFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMIKG 222
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 26/190 (13%)
Query: 199 NDSEALVYEFMVNGSLEEWLHPNREA-LKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257
+D Y FM+ L EA K + L +++ + L+Y+H E VH
Sbjct: 119 HDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIH---EHEYVH 175
Query: 258 CDLKPSNVLLDGELTAHVG--DFGLA-KFLPEATNNFFN------------FQIAEYGMG 302
D+K SN+LL+ + V D+GLA ++ PE + + F + G
Sbjct: 176 GDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKEYKEDPKRCHDGTIEFTSIDAHNG 235
Query: 303 SEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEA---LPERLAEIVDPVLL 359
S GD+ G +++ TG P + NL +V+++ E +A ++D
Sbjct: 236 VAPSRRGDLEILGYCMIQWLTGHLP----WEDNLKDPKYVRDSKIRYRENIASLMDKCFP 291
Query: 360 VEREEGETSK 369
+ + GE +K
Sbjct: 292 EKNKPGEIAK 301
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 22/159 (13%)
Query: 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS 235
+ +RH N++++ F L+ E+ G++ L + L + + +
Sbjct: 67 QSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTAT 117
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA-------T 288
++A+AL Y H ++H D+KP N+LL + DFG + P + T
Sbjct: 118 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 174
Query: 289 NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
++ ++ E M E D++S G+L E GK P
Sbjct: 175 LDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVGKPP 210
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 247 LHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK-------FLPEATNNFFNFQIAEY 299
+ H I+H DLKPSN+++ + T + DFGLA+ P ++
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 300 GMGSEVSTSGDVYSFGILLLETFTG 324
GMG + + D++S G ++ E G
Sbjct: 199 GMGYKENV--DIWSVGCIMGEMIKG 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 247 LHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK-------FLPEATNNFFNFQIAEY 299
+ H I+H DLKPSN+++ + T + DFGLA+ P ++
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 300 GMGSEVSTSGDVYSFGILLLETFTG 324
GMG + + D++S G ++ E G
Sbjct: 199 GMGYKENV--DIWSVGCIMGEMIKG 221
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 100/222 (45%), Gaps = 38/222 (17%)
Query: 121 GAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180
G + + NKL+G++ + L+++ ++ +PS+ I + L + +
Sbjct: 19 GVVYKARNKLTGEV-------VALKKIRLDTE--TEGVPST-----AIREISLLKE--LN 62
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + + LV+EF+ + L++++ + AL + L S +
Sbjct: 63 HPNIVKLLDVIHT-----ENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQL 114
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYG 300
L + H + ++H DLKP N+L++ E + DFGLA+ + + + +
Sbjct: 115 LQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 171
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGN 335
E+ ST+ D++S G + E T + +F G+
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 209
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 22/159 (13%)
Query: 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS 235
+ +RH N++++ F L+ E+ G++ L + L + + +
Sbjct: 67 QSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTAT 117
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA-------T 288
++A+AL Y H ++H D+KP N+LL + DFG + P + T
Sbjct: 118 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGT 174
Query: 289 NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
++ ++ E M E D++S G+L E GK P
Sbjct: 175 LDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVGKPP 210
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 22/159 (13%)
Query: 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS 235
+ +RH N++++ F L+ E+ G++ L + L + + +
Sbjct: 65 QSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTAT 115
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA-------T 288
++A+AL Y H ++H D+KP N+LL + DFG + P + T
Sbjct: 116 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 172
Query: 289 NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
++ ++ E M E D++S G+L E GK P
Sbjct: 173 LDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVGKPP 208
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 22/159 (13%)
Query: 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS 235
+ +RH N++++ F L+ E+ G++ L + L + + +
Sbjct: 65 QSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTAT 115
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA-------T 288
++A+AL Y H ++H D+KP N+LL + DFG + P + T
Sbjct: 116 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGT 172
Query: 289 NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
++ ++ E M E D++S G+L E GK P
Sbjct: 173 LDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVGKPP 208
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 18/116 (15%)
Query: 225 LKNLNLLQRLSIAVDVASALDYL--------HHYCETPIVHCDLKPSNVLLDGELTAHVG 276
L + NL Q + + +D + YL H I+H DLKPSN+++ + T +
Sbjct: 110 LMDANLCQVIQMELD-HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 168
Query: 277 DFGLAK-----FL--PEATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGK 325
DFGLA+ F+ PE ++ GMG + + D++S G ++ E K
Sbjct: 169 DFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKENV--DLWSVGCIMGEMVCHK 222
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 29/172 (16%)
Query: 204 LVYEFMVNGSLEEWLHPNR--EALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLK 261
++ FM +G L +L +R E NL L + VD+A ++YL +H DL
Sbjct: 108 VILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLA 164
Query: 262 PSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIA----------EYGMGSEVSTSGDV 311
N +L ++T V DFGL++ + + +++ A E + + DV
Sbjct: 165 ARNCMLAEDMTVCVADFGLSRKI--YSGDYYRQGCASKLPVKWLALESLADNLYTVHSDV 222
Query: 312 YSFGILLLETFT-GKRPTNEMFTG--NLTLHNFVK-----EALPERLAEIVD 355
++FG+ + E T G+ P + G N ++N++ + PE + E+ D
Sbjct: 223 WAFGVTMWEIMTRGQTP----YAGIENAEIYNYLIGGNRLKQPPECMEEVYD 270
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 100/222 (45%), Gaps = 38/222 (17%)
Query: 121 GAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180
G + + NKL+G++ + L+++ ++ +PS+ I + L + +
Sbjct: 17 GVVYKARNKLTGEV-------VALKKIRLDTE--TEGVPST-----AIREISLLKE--LN 60
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + + LV+EF+ + L++++ + AL + L S +
Sbjct: 61 HPNIVKLLDVIHT-----ENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQL 112
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYG 300
L + H + ++H DLKP N+L++ E + DFGLA+ + + + +
Sbjct: 113 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 169
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGN 335
E+ ST+ D++S G + E T + +F G+
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 207
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 64/156 (41%), Gaps = 16/156 (10%)
Query: 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS 235
+ +RH N++++ F L+ E+ G++ L + L + + +
Sbjct: 62 QSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTAT 112
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF---- 291
++A+AL Y H ++H D+KP N+LL + DFG + P +
Sbjct: 113 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGT 169
Query: 292 FNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
++ E G D++S G+L E GK P
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 247 LHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK-------FLPEATNNFFNFQIAEY 299
+ H I+H DLKPSN+++ + T + DFGLA+ P ++
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 300 GMGSEVSTSGDVYSFGILLLETFTG 324
GMG + + D++S G ++ E G
Sbjct: 199 GMGYKENV--DIWSVGCIMGEMIKG 221
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 22/159 (13%)
Query: 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS 235
+ +RH N++++ F L+ E+ G++ L + L + + +
Sbjct: 64 QSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTAT 114
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA-------T 288
++A+AL Y H ++H D+KP N+LL + DFG + P + T
Sbjct: 115 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGT 171
Query: 289 NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
++ ++ E M E D++S G+L E GK P
Sbjct: 172 LDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVGKPP 207
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 18/115 (15%)
Query: 225 LKNLNLLQRLSIAVDVASALDYL--------HHYCETPIVHCDLKPSNVLLDGELTAHVG 276
L + NL Q + + +D + YL H I+H DLKPSN+++ + T +
Sbjct: 110 LMDANLCQVIQMELD-HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 168
Query: 277 DFGLAK-------FLPEATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTG 324
DFGLA+ P ++ GMG + + D++S G ++ E G
Sbjct: 169 DFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMIKG 221
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 100/222 (45%), Gaps = 38/222 (17%)
Query: 121 GAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180
G + + NKL+G++ + L+++ ++ +PS+ I + L + +
Sbjct: 18 GVVYKARNKLTGEV-------VALKKIRLDTE--TEGVPST-----AIREISLLKE--LN 61
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + + LV+EF+ + L++++ + AL + L S +
Sbjct: 62 HPNIVKLLDVIHT-----ENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQL 113
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYG 300
L + H + ++H DLKP N+L++ E + DFGLA+ + + + +
Sbjct: 114 LQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 170
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGN 335
E+ ST+ D++S G + E T + +F G+
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 208
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 18/115 (15%)
Query: 225 LKNLNLLQRLSIAVDVASALDYL--------HHYCETPIVHCDLKPSNVLLDGELTAHVG 276
L + NL Q + + +D + YL H I+H DLKPSN+++ + T +
Sbjct: 110 LMDANLCQVIQMELD-HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 168
Query: 277 DFGLAK-------FLPEATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTG 324
DFGLA+ P ++ GMG + + D++S G ++ E G
Sbjct: 169 DFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMIKG 221
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 100/222 (45%), Gaps = 38/222 (17%)
Query: 121 GAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180
G + + NKL+G++ + L+++ ++ +PS+ I + L + +
Sbjct: 17 GVVYKARNKLTGEV-------VALKKIRLDTE--TEGVPST-----AIREISLLKE--LN 60
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + + LV+EF+ + L++++ + AL + L S +
Sbjct: 61 HPNIVKLLDVIHT-----ENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQL 112
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYG 300
L + H + ++H DLKP N+L++ E + DFGLA+ + + + +
Sbjct: 113 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 169
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGN 335
E+ ST+ D++S G + E T + +F G+
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 207
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 22/159 (13%)
Query: 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS 235
+ +RH N++++ F L+ E+ G++ L + L + + +
Sbjct: 79 QSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTAT 129
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA-------T 288
++A+AL Y H ++H D+KP N+LL + DFG + P + T
Sbjct: 130 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 186
Query: 289 NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
++ ++ E M E D++S G+L E GK P
Sbjct: 187 LDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVGKPP 222
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 26/190 (13%)
Query: 199 NDSEALVYEFMVNGSLEEWLHPNREA-LKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257
+D Y FM+ L EA K + L +++ + L+Y+H E VH
Sbjct: 119 HDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIH---EHEYVH 175
Query: 258 CDLKPSNVLLDGELTAHVG--DFGLA-KFLPEATNNFFN------------FQIAEYGMG 302
D+K SN+LL+ + V D+GLA ++ PE + + F + G
Sbjct: 176 GDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKEYKEDPKRCHDGTIEFTSIDAHNG 235
Query: 303 SEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEA---LPERLAEIVDPVLL 359
S GD+ G +++ TG P + NL +V+++ E +A ++D
Sbjct: 236 VAPSRRGDLEILGYCMIQWLTGHLP----WEDNLKDPKYVRDSKIRYRENIASLMDKCFP 291
Query: 360 VEREEGETSK 369
+ + GE +K
Sbjct: 292 EKNKPGEIAK 301
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 22/159 (13%)
Query: 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS 235
+ +RH N++++ F L+ E+ G++ L + L + + +
Sbjct: 63 QSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTAT 113
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA-------T 288
++A+AL Y H ++H D+KP N+LL + DFG + P + T
Sbjct: 114 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGT 170
Query: 289 NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
++ ++ E M E D++S G+L E GK P
Sbjct: 171 LDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVGKPP 206
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 100/222 (45%), Gaps = 38/222 (17%)
Query: 121 GAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180
G + + NKL+G++ + L+++ ++ +PS+ I + L + +
Sbjct: 18 GVVYKARNKLTGEV-------VALKKIRLDTE--TEGVPST-----AIREISLLKE--LN 61
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + + LV+EF+ + L++++ + AL + L S +
Sbjct: 62 HPNIVKLLDVIHT-----ENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQL 113
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYG 300
L + H + ++H DLKP N+L++ E + DFGLA+ + + + +
Sbjct: 114 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 170
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGN 335
E+ ST+ D++S G + E T + +F G+
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 208
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 22/159 (13%)
Query: 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS 235
+ +RH N++++ F L+ E+ G++ L + L + + +
Sbjct: 62 QSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTAT 112
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA-------T 288
++A+AL Y H ++H D+KP N+LL + DFG + P + T
Sbjct: 113 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGT 169
Query: 289 NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
++ ++ E M E D++S G+L E GK P
Sbjct: 170 LDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVGKPP 205
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 100/222 (45%), Gaps = 38/222 (17%)
Query: 121 GAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180
G + + NKL+G++ + L+++ ++ +PS+ I + L + +
Sbjct: 19 GVVYKARNKLTGEV-------VALKKIRLDTE--TEGVPST-----AIREISLLKE--LN 62
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + + LV+EF+ + L++++ + AL + L S +
Sbjct: 63 HPNIVKLLDVIHT-----ENKLYLVFEFL-SMDLKDFM--DASALTGIPLPLIKSYLFQL 114
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYG 300
L + H + ++H DLKP N+L++ E + DFGLA+ + + + +
Sbjct: 115 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 171
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGN 335
E+ ST+ D++S G + E T + +F G+
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 209
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 11/78 (14%)
Query: 255 IVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF--NFQIAEYGMGSEV------S 306
I+H DLKPSN+++ + T + DFGLA+ A NF + + Y EV +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLAR---TACTNFMMTPYVVTRYYRAPEVILGMGYA 203
Query: 307 TSGDVYSFGILLLETFTG 324
+ D++S G ++ E G
Sbjct: 204 ANVDIWSVGCIMGELVKG 221
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 22/159 (13%)
Query: 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS 235
+ +RH N++++ F L+ E+ G++ L + L + + +
Sbjct: 62 QSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTAT 112
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA-------T 288
++A+AL Y H ++H D+KP N+LL + DFG + P + T
Sbjct: 113 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGT 169
Query: 289 NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
++ ++ E M E D++S G+L E GK P
Sbjct: 170 LDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVGKPP 205
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 95/224 (42%), Gaps = 32/224 (14%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N++++ + ++ N LV++ M G L ++L + L + + ++V
Sbjct: 83 HPNIIQLKDT-----YETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMRALLEV 136
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPE--------ATNNFF 292
AL L+ IVH DLKP N+LLD ++ + DFG + L T ++
Sbjct: 137 ICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYL 190
Query: 293 NFQIAEYGMGSEVSTSG---DVYSFGILLLETFTGKRP---------TNEMFTGNLTLHN 340
+I E M G D++S G+++ G P + +GN +
Sbjct: 191 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGS 250
Query: 341 FVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKE 384
+ + + ++V L+V+ ++ T++ F + + V+E
Sbjct: 251 PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVVEE 294
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 100/222 (45%), Gaps = 38/222 (17%)
Query: 121 GAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180
G + + NKL+G++ + L+++ ++ +PS+ I + L + +
Sbjct: 17 GVVYKARNKLTGEV-------VALKKIRLDTE--TEGVPST-----AIREISLLKE--LN 60
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + + LV+EF+ + L++++ + AL + L S +
Sbjct: 61 HPNIVKLLDVIHT-----ENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQL 112
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYG 300
L + H + ++H DLKP N+L++ E + DFGLA+ + + + +
Sbjct: 113 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 169
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGN 335
E+ ST+ D++S G + E T + +F G+
Sbjct: 170 RAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 207
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 33/173 (19%)
Query: 172 DLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVY---EFMVNGSLEEWLHPNREALKNL 228
++ + +RH N++ I + D +G S +Y ++ NGSL ++L L
Sbjct: 81 EIYQTVLMRHENILGFI----AADIKGTGSWTQLYLITDYHENGSLYDYLKST-----TL 131
Query: 229 NLLQRLSIAVDVASALDYLHHYC-----ETPIVHCDLKPSNVLLDGELTAHVGDFGLA-K 282
+ L +A S L +LH + I H DLK N+L+ T + D GLA K
Sbjct: 132 DAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVK 191
Query: 283 FLPE------------ATNNFFNFQIAEYGMGSEVSTS---GDVYSFGILLLE 320
F+ + T + ++ + + S D+YSFG++L E
Sbjct: 192 FISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWE 244
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 22/159 (13%)
Query: 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS 235
+ +RH N++++ F L+ E+ G++ L + L + + +
Sbjct: 66 QSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTAT 116
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA-------T 288
++A+AL Y H ++H D+KP N+LL + DFG + P + T
Sbjct: 117 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 173
Query: 289 NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
++ ++ E M E D++S G+L E GK P
Sbjct: 174 LDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVGKPP 209
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 22/159 (13%)
Query: 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS 235
+ +RH N++++ F L+ E+ G++ L + L + + +
Sbjct: 61 QSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTAT 111
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA-------T 288
++A+AL Y H ++H D+KP N+LL + DFG + P + T
Sbjct: 112 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 168
Query: 289 NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
++ ++ E M E D++S G+L E GK P
Sbjct: 169 LDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVGKPP 204
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255
FQ D V +++ G L + H RE L R A ++ASAL YLH I
Sbjct: 108 FQTADKLYFVLDYINGGEL--FYHLQRERC-FLEPRARF-YAAEIASALGYLH---SLNI 160
Query: 256 VHCDLKPSNVLLDGELTAHVGDFGLAK 282
V+ DLKP N+LLD + + DFGL K
Sbjct: 161 VYRDLKPENILLDSQGHIVLTDFGLCK 187
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 64/170 (37%), Gaps = 21/170 (12%)
Query: 176 NNFIRHRNLVKIITSCASVDFQGNDSE-ALVYEFMVNGSLEEWLHPNREALKNL--NLLQ 232
+ HRN+ + + G D + LV EF GS+ + +KN N L+
Sbjct: 75 KKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTD-------LIKNTKGNTLK 127
Query: 233 RLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF 292
IA L L H + ++H D+K NVLL + DFG++ L
Sbjct: 128 EEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRN 187
Query: 293 NFQIAEYGMGSEV-----------STSGDVYSFGILLLETFTGKRPTNEM 331
F Y M EV D++S GI +E G P +M
Sbjct: 188 TFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM 237
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 95/224 (42%), Gaps = 32/224 (14%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N++++ + ++ N LV++ M G L ++L + L + + ++V
Sbjct: 83 HPNIIQLKDT-----YETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMRALLEV 136
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPE--------ATNNFF 292
AL L+ IVH DLKP N+LLD ++ + DFG + L T ++
Sbjct: 137 ICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYL 190
Query: 293 NFQIAEYGMGSEVSTSG---DVYSFGILLLETFTGKRP---------TNEMFTGNLTLHN 340
+I E M G D++S G+++ G P + +GN +
Sbjct: 191 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGS 250
Query: 341 FVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKE 384
+ + + ++V L+V+ ++ T++ F + + V+E
Sbjct: 251 PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVVEE 294
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 100/222 (45%), Gaps = 38/222 (17%)
Query: 121 GAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180
G + + NKL+G++ + L+++ ++ +PS+ I + L + +
Sbjct: 21 GVVYKARNKLTGEV-------VALKKIRLDTE--TEGVPST-----AIREISLLKE--LN 64
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + + LV+EF+ + L++++ + AL + L S +
Sbjct: 65 HPNIVKLLDVIHT-----ENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQL 116
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYG 300
L + H + ++H DLKP N+L++ E + DFGLA+ + + + +
Sbjct: 117 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 173
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGN 335
E+ ST+ D++S G + E T + +F G+
Sbjct: 174 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 211
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 100/222 (45%), Gaps = 38/222 (17%)
Query: 121 GAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180
G + + NKL+G++ + L+++ ++ +PS+ I + L + +
Sbjct: 20 GVVYKARNKLTGEV-------VALKKIRLDTE--TEGVPST-----AIREISLLKE--LN 63
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + + LV+EF+ + L++++ + AL + L S +
Sbjct: 64 HPNIVKLLDVIHT-----ENKLYLVFEFL-SMDLKKFM--DASALTGIPLPLIKSYLFQL 115
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYG 300
L + H + ++H DLKP N+L++ E + DFGLA+ + + + +
Sbjct: 116 LQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGN 335
E+ ST+ D++S G + E T + +F G+
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 210
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 22/159 (13%)
Query: 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS 235
+ +RH N++++ F L+ E+ G++ L + L + + +
Sbjct: 62 QSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTAT 112
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA-------T 288
++A+AL Y H ++H D+KP N+LL + DFG + P + T
Sbjct: 113 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGT 169
Query: 289 NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
++ ++ E M E D++S G+L E GK P
Sbjct: 170 LDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVGKPP 205
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 22/141 (15%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS------IAVDVASALDYLHH 249
F+ N + +V E++ G E +L + R S A + +YLH
Sbjct: 131 FKDNSNLYMVMEYVAGG----------EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH- 179
Query: 250 YCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVS 306
+++ DLKP N+L+D + V DFG AK + AT + E + +
Sbjct: 180 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPEYLAPEIILSKGYN 237
Query: 307 TSGDVYSFGILLLETFTGKRP 327
+ D ++ G+L+ E G P
Sbjct: 238 KAVDWWALGVLIYEMAAGYPP 258
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 66/158 (41%), Gaps = 23/158 (14%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H +++ +I S S F LV++ M G L ++L L+ + SI +
Sbjct: 159 HPHIITLIDSYESSSFM-----FLVFDLMRKGELFDYLTEK----VALSEKETRSIMRSL 209
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPE--------ATNNFF 292
A+ +LH IVH DLKP N+LLD + + DFG + L T +
Sbjct: 210 LEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYL 266
Query: 293 NFQIAEYGMGSEVSTSG---DVYSFGILLLETFTGKRP 327
+I + M G D+++ G++L G P
Sbjct: 267 APEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 22/159 (13%)
Query: 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS 235
+ +RH N++++ F L+ E+ G++ L + L + + +
Sbjct: 65 QSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTAT 115
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA-------T 288
++A+AL Y H ++H D+KP N+LL + DFG + P + T
Sbjct: 116 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 172
Query: 289 NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
++ ++ E M E D++S G+L E GK P
Sbjct: 173 LDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVGKPP 208
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 78/190 (41%), Gaps = 26/190 (13%)
Query: 199 NDSEALVYEFMVNGSLEEWLHPNREA-LKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257
+D Y FM+ L EA K + L +++ + L+Y+H E VH
Sbjct: 119 HDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIH---EHEYVH 175
Query: 258 CDLKPSNVLLDGELTAHVG--DFGLA-KFLPEATNNFF------------NFQIAEYGMG 302
D+K SN+LL+ + V D+GLA ++ PE + + F + G
Sbjct: 176 GDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNG 235
Query: 303 SEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEA---LPERLAEIVDPVLL 359
S GD+ G +++ TG P + NL +V+++ E +A ++D
Sbjct: 236 VAPSRRGDLEILGYCMIQWLTGHLP----WEDNLKDPKYVRDSKIRYRENIASLMDKCFP 291
Query: 360 VEREEGETSK 369
GE +K
Sbjct: 292 AANAPGEIAK 301
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 21/105 (20%)
Query: 255 IVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNN----------FFNFQIAEYGMGSE 304
++H DLKPSN+L++ V DFGLA+ + E+ + F + E
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPE 192
Query: 305 V-------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFV 342
V S + DV+S G +L E F +RP +F G H +
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFL-RRP---IFPGRDYRHQLL 233
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 22/159 (13%)
Query: 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS 235
+ +RH N++++ F L+ E+ G++ L + L + + +
Sbjct: 65 QSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTAT 115
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA-------T 288
++A+AL Y H ++H D+KP N+LL + DFG + P + T
Sbjct: 116 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGT 172
Query: 289 NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
++ ++ E M E D++S G+L E GK P
Sbjct: 173 LDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVGKPP 208
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 22/159 (13%)
Query: 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS 235
+ +RH N++++ F L+ E+ G++ L + L + + +
Sbjct: 59 QSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTAT 109
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA-------T 288
++A+AL Y H ++H D+KP N+LL + DFG + P + T
Sbjct: 110 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 166
Query: 289 NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
++ ++ E M E D++S G+L E GK P
Sbjct: 167 LDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVGKPP 202
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 22/159 (13%)
Query: 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS 235
+ +RH N++++ F L+ E+ G++ L + L + + +
Sbjct: 62 QSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTAT 112
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA-------T 288
++A+AL Y H ++H D+KP N+LL + DFG + P + T
Sbjct: 113 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGT 169
Query: 289 NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
++ ++ E M E D++S G+L E GK P
Sbjct: 170 LDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVGKPP 205
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 255 IVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYGMGSEVSTSG----- 309
I+H D+KPSN+LLD + DFG++ L ++ + Y + S
Sbjct: 147 IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGY 206
Query: 310 ----DVYSFGILLLETFTGKRP 327
DV+S GI L E TG+ P
Sbjct: 207 DVRSDVWSLGITLYELATGRFP 228
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 22/159 (13%)
Query: 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS 235
+ +RH N++++ F L+ E+ G++ L + L + + +
Sbjct: 63 QSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTAT 113
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA-------T 288
++A+AL Y H ++H D+KP N+LL + DFG + P + T
Sbjct: 114 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGT 170
Query: 289 NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
++ ++ E M E D++S G+L E GK P
Sbjct: 171 LDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVGKPP 206
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 99/222 (44%), Gaps = 38/222 (17%)
Query: 121 GAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180
G + + NKL+G++ + L+++ ++ +PS+ I + L + +
Sbjct: 20 GVVYKARNKLTGEV-------VALKKIRLDTE--TEGVPST-----AIREISLLKE--LN 63
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + + LV+EF+ + L+ ++ + AL + L S +
Sbjct: 64 HPNIVKLLDVIHT-----ENKLYLVFEFL-HQDLKTFM--DASALTGIPLPLIKSYLFQL 115
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYG 300
L + H + ++H DLKP N+L++ E + DFGLA+ + + + +
Sbjct: 116 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGN 335
E+ ST+ D++S G + E T + +F G+
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 210
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 100/222 (45%), Gaps = 38/222 (17%)
Query: 121 GAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180
G + + NKL+G++ + L+++ ++ +PS+ I + L + +
Sbjct: 18 GVVYKARNKLTGEV-------VALKKIRLDTE--TEGVPST-----AIREISLLKE--LN 61
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + + LV+EF+ + L++++ + AL + L S +
Sbjct: 62 HPNIVKLLDVIHT-----ENKLYLVFEFL-SMDLKKFM--DASALTGIPLPLIKSYLFQL 113
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYG 300
L + H + ++H DLKP N+L++ E + DFGLA+ + + + +
Sbjct: 114 LQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 170
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGN 335
E+ ST+ D++S G + E T + +F G+
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 208
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 11/86 (12%)
Query: 247 LHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF--NFQIAEYGMGSE 304
+ H I+H DLKPSN+++ + T + DFGLA+ A+ NF + + Y E
Sbjct: 137 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TASTNFMMTPYVVTRYYRAPE 193
Query: 305 V------STSGDVYSFGILLLETFTG 324
V + D++S G ++ E G
Sbjct: 194 VILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 27/172 (15%)
Query: 183 NLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVAS 242
N+VK++ Q + + +L++E++ N + L+P L + ++ R I ++
Sbjct: 88 NIVKLLDIVRD---QHSKTPSLIFEYVNNTDFKV-LYP---TLTDYDI--RYYI-YELLK 137
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFNFQIA-EYG 300
ALDY H I+H D+KP NV++D EL + D+GLA+F +N ++A Y
Sbjct: 138 ALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE--YNVRVASRYF 192
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEA 345
G E+ S D++S G + K P F G+ VK A
Sbjct: 193 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP---FFYGHDNHDQLVKIA 241
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 68/172 (39%), Gaps = 46/172 (26%)
Query: 179 IRHRNLVKIITS---CASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS 235
++H N+++ I + SVD L+ F GSL ++L N + L
Sbjct: 75 MKHENILQFIGAEKRGTSVDV----DLWLITAFHEKGSLSDFLKANVVSWNEL-----CH 125
Query: 236 IAVDVASALDYLHHYC-------ETPIVHCDLKPSNVLLDGELTAHVGDFGLA-KF---- 283
IA +A L YLH + I H D+K NVLL LTA + DFGLA KF
Sbjct: 126 IAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGK 185
Query: 284 ---------------LPEATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLE 320
PE NFQ + D+Y+ G++L E
Sbjct: 186 SAGDTHGQVGTRRYMAPEVLEGAINFQ-------RDAFLRIDMYAMGLVLWE 230
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 13/140 (9%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255
FQ D V E++ G L + + + Q + A +++ L +LH + I
Sbjct: 89 FQTVDRLYFVMEYVNGGDLMYHI----QQVGKFKEPQAVFYAAEISIGLFFLH---KRGI 141
Query: 256 VHCDLKPSNVLLDGELTAHVGDFGLAK--FLPEATNNFF----NFQIAEYGMGSEVSTSG 309
++ DLK NV+LD E + DFG+ K + T F ++ E S
Sbjct: 142 IYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSV 201
Query: 310 DVYSFGILLLETFTGKRPTN 329
D +++G+LL E G+ P +
Sbjct: 202 DWWAYGVLLYEMLAGQPPFD 221
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 21/105 (20%)
Query: 255 IVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYGMGSEVST------- 307
++H DLKPSN+L++ V DFGLA+ + E+ + + GM V+T
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPE 192
Query: 308 ----------SGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFV 342
+ DV+S G +L E F +RP +F G H +
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFL-RRP---IFPGRDYRHQLL 233
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 27/172 (15%)
Query: 183 NLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVAS 242
N+VK++ Q + + +L++E++ N + L+P L + ++ R I ++
Sbjct: 87 NIVKLLDIVRD---QHSKTPSLIFEYVNNTDFKV-LYP---TLTDYDI--RYYI-YELLK 136
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFNFQIA-EYG 300
ALDY H I+H D+KP NV++D EL + D+GLA+F +N ++A Y
Sbjct: 137 ALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE--YNVRVASRYF 191
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEA 345
G E+ S D++S G + K P F G+ VK A
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP---FFYGHDNHDQLVKIA 240
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 26/164 (15%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + F ++ ++ EF G+++ + E + L Q +
Sbjct: 93 HPNIVKLLDA-----FYYENNLWILIEFCAGGAVDAVM---LELERPLTESQIQVVCKQT 144
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVL--LDGELTAHVGDFGLAKFLPEATNNFFNFQIAE 298
AL+YLH + I+H DLK N+L LDG++ + DFG++ +F
Sbjct: 145 LDALNYLH---DNKIIHRDLKAGNILFTLDGDIK--LADFGVSAKNTRTIQRRDSFIGTP 199
Query: 299 YGMGSEV-----------STSGDVYSFGILLLETFTGKRPTNEM 331
Y M EV DV+S GI L+E + P +E+
Sbjct: 200 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 243
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 24/168 (14%)
Query: 187 IITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDY 246
IIT V + + ALV+E + N ++ R+ L + ++ R + ++ ALDY
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQL----RQTLTDYDI--RFYM-YEILKALDY 146
Query: 247 LHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFNFQIA-EYGMGSE 304
H I+H D+KP NV++D E + D+GLA+F +N ++A Y G E
Sbjct: 147 CH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPE 201
Query: 305 V-------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEA 345
+ S D++S G +L K P F G+ V+ A
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQLVRIA 246
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 27/172 (15%)
Query: 183 NLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVAS 242
N+VK++ Q + + +L++E++ N + L+P L + ++ R I ++
Sbjct: 88 NIVKLLDIVRD---QHSKTPSLIFEYVNNTDFKV-LYP---TLTDYDI--RYYI-YELLK 137
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFNFQIA-EYG 300
ALDY H I+H D+KP NV++D EL + D+GLA+F +N ++A Y
Sbjct: 138 ALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE--YNVRVASRYF 192
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEA 345
G E+ S D++S G + K P F G+ VK A
Sbjct: 193 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP---FFYGHDNHDQLVKIA 241
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 27/172 (15%)
Query: 183 NLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVAS 242
N+VK++ Q + + +L++E++ N + L+P L + ++ R I ++
Sbjct: 87 NIVKLLDIVRD---QHSKTPSLIFEYVNNTDFKV-LYP---TLTDYDI--RYYI-YELLK 136
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFNFQIA-EYG 300
ALDY H I+H D+KP NV++D EL + D+GLA+F +N ++A Y
Sbjct: 137 ALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE--YNVRVASRYF 191
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEA 345
G E+ S D++S G + K P F G+ VK A
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP---FFYGHDNHDQLVKIA 240
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 27/172 (15%)
Query: 183 NLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVAS 242
N+VK++ Q + + +L++E++ N + L+P L + ++ R I ++
Sbjct: 87 NIVKLLDIVRD---QHSKTPSLIFEYVNNTDFKV-LYP---TLTDYDI--RYYI-YELLK 136
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFNFQIA-EYG 300
ALDY H I+H D+KP NV++D EL + D+GLA+F +N ++A Y
Sbjct: 137 ALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE--YNVRVASRYF 191
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEA 345
G E+ S D++S G + K P F G+ VK A
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP---FFYGHDNHDQLVKIA 240
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 27/172 (15%)
Query: 183 NLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVAS 242
N+VK++ Q + + +L++E++ N + L+P L + ++ R I ++
Sbjct: 89 NIVKLLDIVRD---QHSKTPSLIFEYVNNTDFKV-LYP---TLTDYDI--RYYI-YELLK 138
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFNFQIA-EYG 300
ALDY H I+H D+KP NV++D EL + D+GLA+F +N ++A Y
Sbjct: 139 ALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE--YNVRVASRYF 193
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEA 345
G E+ S D++S G + K P F G+ VK A
Sbjct: 194 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP---FFYGHDNHDQLVKIA 242
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 250 YC-ETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN------FQIAEYGMG 302
YC + ++H DLKP N+L++ E + DFGLA+ + + ++ + MG
Sbjct: 115 YCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMG 174
Query: 303 S-EVSTSGDVYSFGILLLETFTG 324
S + ST+ D++S G + E G
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 27/172 (15%)
Query: 183 NLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVAS 242
N+VK++ Q + + +L++E++ N + L+P L + ++ R I ++
Sbjct: 87 NIVKLLDIVRD---QHSKTPSLIFEYVNNTDFKV-LYP---TLTDYDI--RYYI-YELLK 136
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFNFQIA-EYG 300
ALDY H I+H D+KP NV++D EL + D+GLA+F +N ++A Y
Sbjct: 137 ALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE--YNVRVASRYF 191
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEA 345
G E+ S D++S G + K P F G+ VK A
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP---FFYGHDNHDQLVKIA 240
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 99/222 (44%), Gaps = 38/222 (17%)
Query: 121 GAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180
G + + NKL+G++ + L ++ ++ +PS+ I + L + +
Sbjct: 17 GVVYKARNKLTGEV-------VALXKIRLDTE--TEGVPST-----AIREISLLKE--LN 60
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + + LV+EF+ + L++++ + AL + L S +
Sbjct: 61 HPNIVKLLDVIHT-----ENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQL 112
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYG 300
L + H + ++H DLKP N+L++ E + DFGLA+ + + + +
Sbjct: 113 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 169
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGN 335
E+ ST+ D++S G + E T + +F G+
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 207
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 99/222 (44%), Gaps = 38/222 (17%)
Query: 121 GAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180
G + + NKL+G++ + L ++ ++ +PS+ I + L + +
Sbjct: 16 GVVYKARNKLTGEV-------VALXKIRLDTE--TEGVPST-----AIREISLLKE--LN 59
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + + LV+EF+ + L++++ + AL + L S +
Sbjct: 60 HPNIVKLLDVIHT-----ENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQL 111
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYG 300
L + H + ++H DLKP N+L++ E + DFGLA+ + + + +
Sbjct: 112 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 168
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGN 335
E+ ST+ D++S G + E T + +F G+
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 206
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 250 YC-ETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN------FQIAEYGMG 302
YC + ++H DLKP N+L++ E + DFGLA+ + + ++ + MG
Sbjct: 115 YCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMG 174
Query: 303 S-EVSTSGDVYSFGILLLETFTG 324
S + ST+ D++S G + E G
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 250 YC-ETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN------FQIAEYGMG 302
YC + ++H DLKP N+L++ E + DFGLA+ + + ++ + MG
Sbjct: 115 YCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMG 174
Query: 303 S-EVSTSGDVYSFGILLLETFTG 324
S + ST+ D++S G + E G
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 27/172 (15%)
Query: 183 NLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVAS 242
N+VK++ Q + + +L++E++ N + L+P L + ++ R I ++
Sbjct: 108 NIVKLLDIVRD---QHSKTPSLIFEYVNNTDFKV-LYP---TLTDYDI--RYYI-YELLK 157
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFNFQIA-EYG 300
ALDY H I+H D+KP NV++D EL + D+GLA+F +N ++A Y
Sbjct: 158 ALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE--YNVRVASRYF 212
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEA 345
G E+ S D++S G + K P F G+ VK A
Sbjct: 213 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP---FFYGHDNHDQLVKIA 261
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 27/172 (15%)
Query: 183 NLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVAS 242
N+VK++ Q + + +L++E++ N + L+P L + ++ R I ++
Sbjct: 87 NIVKLLDIVRD---QHSKTPSLIFEYVNNTDFKV-LYP---TLTDYDI--RYYI-YELLK 136
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFNFQIA-EYG 300
ALDY H I+H D+KP NV++D EL + D+GLA+F +N ++A Y
Sbjct: 137 ALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE--YNVRVASRYF 191
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEA 345
G E+ S D++S G + K P F G+ VK A
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP---FFYGHDNHDQLVKIA 240
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 27/172 (15%)
Query: 183 NLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVAS 242
N+VK++ Q + + +L++E++ N + L+P L + ++ R I ++
Sbjct: 87 NIVKLLDIVRD---QHSKTPSLIFEYVNNTDFKV-LYP---TLTDYDI--RYYI-YELLK 136
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFNFQIA-EYG 300
ALDY H I+H D+KP NV++D EL + D+GLA+F +N ++A Y
Sbjct: 137 ALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE--YNVRVASRYF 191
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEA 345
G E+ S D++S G + K P F G+ VK A
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP---FFYGHDNHDQLVKIA 240
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 26/164 (15%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + F ++ ++ EF G+++ + E + L Q +
Sbjct: 93 HPNIVKLLDA-----FYYENNLWILIEFCAGGAVDAVM---LELERPLTESQIQVVCKQT 144
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVL--LDGELTAHVGDFGLAKFLPEATNNFFNFQIAE 298
AL+YLH + I+H DLK N+L LDG++ + DFG++ +F
Sbjct: 145 LDALNYLH---DNKIIHRDLKAGNILFTLDGDIK--LADFGVSAKNTRXIQRRDSFIGTP 199
Query: 299 YGMGSEV-----------STSGDVYSFGILLLETFTGKRPTNEM 331
Y M EV DV+S GI L+E + P +E+
Sbjct: 200 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 243
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 244 LDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYGMGS 303
L Y+H I+H DLKPSNV ++ + + DFGLA+ +A + +
Sbjct: 136 LKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLAR---QADEEMTGYVATRWYRAP 189
Query: 304 EV-------STSGDVYSFGILLLETFTGKR--PTNEMFTGNLTLHNFVKEALPERLAEI 353
E+ + + D++S G ++ E GK P ++ + V PE LA+I
Sbjct: 190 EIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKI 248
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 23/162 (14%)
Query: 185 VKIITSCAS---VDFQG----NDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQR--LS 235
+ I+ C S V + G N +V E+ GS+ + + L+N L + +
Sbjct: 75 ISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIR-----LRNKTLTEDEIAT 129
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQ 295
I L+YLH + +H D+K N+LL+ E A + DFG+A L +
Sbjct: 130 ILQSTLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVI 186
Query: 296 IAEYGMGSEV------STSGDVYSFGILLLETFTGKRPTNEM 331
+ M EV + D++S GI +E GK P ++
Sbjct: 187 GTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADI 228
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 15/110 (13%)
Query: 226 KNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLL------DGELTAHVGDFG 279
+ + L+ I+ + LDY+H C I+H D+KP NVL+ + + + D G
Sbjct: 126 RGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLG 183
Query: 280 LAKFLPEATNNFFNFQIAEYG-----MGSEVSTSGDVYSFGILLLETFTG 324
A + E N + Q EY +G+ D++S L+ E TG
Sbjct: 184 NACWYDEHYTN--SIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 225 LKNLNLLQRLSIAVD-------VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGD 277
L + NL Q + + +D + L + H I+H DLKPSN+++ + T + D
Sbjct: 110 LMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILD 169
Query: 278 FGLAK-------FLPEATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGK 325
FGLA+ P ++ GMG + + D++S G ++ E K
Sbjct: 170 FGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMVRHK 222
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 225 LKNLNLLQRLSIAVD-------VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGD 277
L + NL Q + + +D + L + H I+H DLKPSN+++ + T + D
Sbjct: 110 LMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILD 169
Query: 278 FGLAK-------FLPEATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGK 325
FGLA+ P ++ GMG + + D++S G ++ E K
Sbjct: 170 FGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMVRHK 222
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 15/110 (13%)
Query: 226 KNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLL------DGELTAHVGDFG 279
+ + L+ I+ + LDY+H C I+H D+KP NVL+ + + + D G
Sbjct: 126 RGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLG 183
Query: 280 LAKFLPEATNNFFNFQIAEYG-----MGSEVSTSGDVYSFGILLLETFTG 324
A + E N + Q EY +G+ D++S L+ E TG
Sbjct: 184 NACWYDEHYTN--SIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 23/159 (14%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLH-------PNREALKNLNLLQR 233
H N+V ++ +C + ++ EF G+L +L P ++ K+ L+
Sbjct: 90 HLNVVNLLGACT----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEH 145
Query: 234 L-SIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF- 291
L + VA +++L +H DL N+LL + + DFGLA+ + + +
Sbjct: 146 LIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVR 202
Query: 292 -------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ E + DV+SFG+LL E F+
Sbjct: 203 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 23/156 (14%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEW-LHPNREALKNLNLLQRLSIA 237
+RH NLV ++ C + LV+EF+ + L++ L PN L+
Sbjct: 81 LRHENLVNLLEVC-----KKKKRWYLVFEFVDHTILDDLELFPN-----GLDYQVVQKYL 130
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIA 297
+ + + + H + I+H D+KP N+L+ + DFG A+ L A ++ ++A
Sbjct: 131 FQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLA-APGEVYDDEVA 186
Query: 298 -------EYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E +G + + DV++ G L+ E F G+
Sbjct: 187 TRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 21/105 (20%)
Query: 255 IVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYGMGSEVST------- 307
++H DLKPSN+L++ V DFGLA+ + E+ + + GM V+T
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPE 192
Query: 308 ----------SGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFV 342
+ DV+S G +L E F +RP +F G H +
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFL-RRP---IFPGRDYRHQLL 233
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 23/101 (22%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL-------------PE 286
+ SA+ Y H + IVH DLK N+LLD ++ + DFG + P
Sbjct: 115 IVSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPY 171
Query: 287 ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
A FQ +Y G EV DV+S G++L +G P
Sbjct: 172 AAPEL--FQGKKYD-GPEV----DVWSLGVILYTLVSGSLP 205
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 98/234 (41%), Gaps = 47/234 (20%)
Query: 109 PLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRL-EQLVMNGNFFRGNIPSSLSSL-R 166
P N+ +LK +G + ++ KL+ I + +++ ++ +N SSL L R
Sbjct: 11 PHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNS--------SSLQKLFR 62
Query: 167 GIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALK 226
+ + + + H N+VK+ + + LV E+ G + ++L A
Sbjct: 63 EVRIMKV-----LNHPNIVKLFEVIET-----EKTLYLVMEYASGGEVFDYL----VAHG 108
Query: 227 NLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL-- 284
+ + + + SA+ Y H + IVH DLK N+LLD ++ + DFG +
Sbjct: 109 RMKEKEARAKFRQIVSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF 165
Query: 285 -----------PEATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
P A FQ +Y G EV DV+S G++L +G P
Sbjct: 166 GNKLDTFCGSPPYAAPEL--FQGKKYD-GPEV----DVWSLGVILYTLVSGSLP 212
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 23/101 (22%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL-------------PE 286
+ SA+ Y H + IVH DLK N+LLD ++ + DFG + P
Sbjct: 122 IVSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPY 178
Query: 287 ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
A FQ +Y G EV DV+S G++L +G P
Sbjct: 179 AAPEL--FQGKKYD-GPEV----DVWSLGVILYTLVSGSLP 212
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 225 LKNLNLLQRLSIAVD-------VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGD 277
L + NL Q + + +D + L + H I+H DLKPSN+++ + T + D
Sbjct: 103 LMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILD 162
Query: 278 FGLAK-------FLPEATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGK 325
FGLA+ P ++ GMG + + D++S G ++ E K
Sbjct: 163 FGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMVRHK 215
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 16/135 (11%)
Query: 200 DSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259
D +V E++ GSL + + ++ Q ++ + AL++LH ++H +
Sbjct: 91 DELWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHS---NQVIHRN 142
Query: 260 LKPSNVLLDGELTAHVGDFGL-AKFLPEATNNFFNFQIAEYGMGSEVSTSG------DVY 312
+K N+LL + + + DFG A+ PE + Y M EV T D++
Sbjct: 143 IKSDNILLGMDGSVKLTDFGFCAQITPEQSKR-STMVGTPYWMAPEVVTRKAYGPKVDIW 201
Query: 313 SFGILLLETFTGKRP 327
S GI+ +E G+ P
Sbjct: 202 SLGIMAIEMIEGEPP 216
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 15/135 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
L+ + M G L +++ RE N+ L+ V +A ++YL + +VH DL
Sbjct: 97 LIMQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAAR 150
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFG 315
NVL+ + DFG AK L + + E + + DV+S+G
Sbjct: 151 NVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 210
Query: 316 ILLLETFT-GKRPTN 329
+ + E T G +P +
Sbjct: 211 VTVWELMTFGSKPYD 225
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 61/140 (43%), Gaps = 17/140 (12%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREAL--KNLNLLQRLSIAVDVASALDYLHHYCET 253
F+ +D +V E SL E LH R+A+ R +I + YLH+
Sbjct: 95 FEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI-----QGVQYLHN---N 145
Query: 254 PIVHCDLKPSNVLLDGELTAHVGDFGLA---KFLPEATNNFF---NFQIAEYGMGSEVST 307
++H DLK N+ L+ ++ +GDFGLA +F E + N+ E S
Sbjct: 146 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSF 205
Query: 308 SGDVYSFGILLLETFTGKRP 327
D++S G +L GK P
Sbjct: 206 EVDIWSLGCILYTLLVGKPP 225
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 15/135 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
L+ + M G L +++ RE N+ L+ V +A ++YL + +VH DL
Sbjct: 95 LIMQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAAR 148
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFG 315
NVL+ + DFG AK L + + E + + DV+S+G
Sbjct: 149 NVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 208
Query: 316 ILLLETFT-GKRPTN 329
+ + E T G +P +
Sbjct: 209 VTVWELMTFGSKPYD 223
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 23/101 (22%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL-------------PE 286
+ SA+ Y H + IVH DLK N+LLD ++ + DFG + P
Sbjct: 122 IVSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPY 178
Query: 287 ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
A FQ +Y G EV DV+S G++L +G P
Sbjct: 179 AAPEL--FQGKKYD-GPEV----DVWSLGVILYTLVSGSLP 212
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 15/135 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
L+ + M G L +++ RE N+ L+ V +A ++YL + +VH DL
Sbjct: 95 LIMQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAAR 148
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFG 315
NVL+ + DFG AK L + + E + + DV+S+G
Sbjct: 149 NVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 208
Query: 316 ILLLETFT-GKRPTN 329
+ + E T G +P +
Sbjct: 209 VTVWELMTFGSKPYD 223
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 247 LHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK-------FLPEATNNFFNFQIAEY 299
+ H I+H DLKPSN+++ + T + DFGLA+ P ++
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 300 GMGSEVSTSGDVYSFGILLLETFTGK 325
GMG + + D++S G ++ E K
Sbjct: 199 GMGYKENV--DIWSVGCIMGEMVRHK 222
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 24/154 (15%)
Query: 183 NLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVAS 242
N++K+I + + + ALV+E++ N ++ + L + ++ R + ++
Sbjct: 99 NIIKLIDTVKD---PVSKTPALVFEYINNTDFKQLY----QILTDFDI--RFYM-YELLK 148
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFNFQIA-EYG 300
ALDY H I+H D+KP NV++D + + D+GLA+F A +N ++A Y
Sbjct: 149 ALDYCH---SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQE--YNVRVASRYF 203
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRP 327
G E+ S D++S G +L + P
Sbjct: 204 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRREP 237
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 24/154 (15%)
Query: 183 NLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVAS 242
N++K+I + + + ALV+E++ N ++ + L + ++ R + ++
Sbjct: 94 NIIKLIDTVKD---PVSKTPALVFEYINNTDFKQLY----QILTDFDI--RFYM-YELLK 143
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFNFQIA-EYG 300
ALDY H I+H D+KP NV++D + + D+GLA+F A +N ++A Y
Sbjct: 144 ALDYCH---SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQE--YNVRVASRYF 198
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRP 327
G E+ S D++S G +L + P
Sbjct: 199 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRREP 232
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 247 LHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK-------FLPEATNNFFNFQIAEY 299
+ H I+H DLKPSN+++ + T + DFGLA+ P ++
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 300 GMGSEVSTSGDVYSFGILLLETFTGK 325
GMG + + D++S G ++ E K
Sbjct: 199 GMGYKENV--DIWSVGCIMGEMVRHK 222
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 23/158 (14%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N++++ + ++ N LV++ M G L ++L + L + + ++V
Sbjct: 70 HPNIIQLKDT-----YETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMRALLEV 123
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPE--------ATNNFF 292
AL L+ IVH DLKP N+LLD ++ + DFG + L T ++
Sbjct: 124 ICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYL 177
Query: 293 NFQIAEYGMGSEVSTSG---DVYSFGILLLETFTGKRP 327
+I E M G D++S G+++ G P
Sbjct: 178 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 15/135 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
L+ + M G L +++ RE N+ L+ V +A ++YL + +VH DL
Sbjct: 95 LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAAR 148
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFG 315
NVL+ + DFG AK L + + E + + DV+S+G
Sbjct: 149 NVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 208
Query: 316 ILLLETFT-GKRPTN 329
+ + E T G +P +
Sbjct: 209 VTVWELMTFGSKPYD 223
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 18/134 (13%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
++ E G L +L N+ +LK L L+ ++ + A+ YL VH D+
Sbjct: 101 IIMELYPYGELGHYLERNKNSLKVLTLVL---YSLQICKAMAYLE---SINCVHRDIAVR 154
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEY---GMGSE------VSTSGDVYSF 314
N+L+ +GDFGL++++ + +++ + M E +T+ DV+ F
Sbjct: 155 NILVASPECVKLGDFGLSRYIED--EDYYKASVTRLPIKWMSPESINFRRFTTASDVWMF 212
Query: 315 GILLLETFT-GKRP 327
+ + E + GK+P
Sbjct: 213 AVCMWEILSFGKQP 226
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 61/140 (43%), Gaps = 17/140 (12%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREAL--KNLNLLQRLSIAVDVASALDYLHHYCET 253
F+ +D +V E SL E LH R+A+ R +I + YLH+
Sbjct: 111 FEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI-----QGVQYLHN---N 161
Query: 254 PIVHCDLKPSNVLLDGELTAHVGDFGLA---KFLPEATNNFF---NFQIAEYGMGSEVST 307
++H DLK N+ L+ ++ +GDFGLA +F E + N+ E S
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSF 221
Query: 308 SGDVYSFGILLLETFTGKRP 327
D++S G +L GK P
Sbjct: 222 EVDIWSLGCILYTLLVGKPP 241
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 15/135 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
L+ + M G L +++ RE N+ L+ V +A ++YL + +VH DL
Sbjct: 100 LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAAR 153
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFG 315
NVL+ + DFG AK L + + E + + DV+S+G
Sbjct: 154 NVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 213
Query: 316 ILLLETFT-GKRPTN 329
+ + E T G +P +
Sbjct: 214 VTVWELMTFGSKPYD 228
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 26/164 (15%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + F ++ ++ EF G+++ + E + L Q +
Sbjct: 93 HPNIVKLLDA-----FYYENNLWILIEFCAGGAVDAVM---LELERPLTESQIQVVCKQT 144
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVL--LDGELTAHVGDFGLAKFLPEATNNFFNFQIAE 298
AL+YLH + I+H DLK N+L LDG++ + DFG++ F
Sbjct: 145 LDALNYLH---DNKIIHRDLKAGNILFTLDGDIK--LADFGVSAKNTRXIQRRDXFIGTP 199
Query: 299 YGMGSEV-----------STSGDVYSFGILLLETFTGKRPTNEM 331
Y M EV DV+S GI L+E + P +E+
Sbjct: 200 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 243
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 23/159 (14%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLH-------PNREALKNLNLLQR 233
H N+V ++ +C + ++ EF G+L +L P ++ K+ L+
Sbjct: 90 HLNVVNLLGACT----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEH 145
Query: 234 L-SIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF- 291
L + VA +++L +H DL N+LL + + DFGLA+ + + +
Sbjct: 146 LICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 202
Query: 292 -------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ E + DV+SFG+LL E F+
Sbjct: 203 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 27/165 (16%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + F ++ ++ EF G+++ + E + L Q +
Sbjct: 66 HPNIVKLLDA-----FYYENNLWILIEFCAGGAVDAVM---LELERPLTESQIQVVCKQT 117
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVL--LDGELTAHVGDFGL-AKFLPEATNNFFNFQIA 297
AL+YLH + I+H DLK N+L LDG++ + DFG+ AK +F
Sbjct: 118 LDALNYLH---DNKIIHRDLKAGNILFTLDGDIK--LADFGVSAKNTRTXIQRRDSFIGT 172
Query: 298 EYGMGSEV-----------STSGDVYSFGILLLETFTGKRPTNEM 331
Y M EV DV+S GI L+E + P +E+
Sbjct: 173 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 217
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 26/164 (15%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS--I 236
++H +V +I + FQ L+ E++ G L ++ RE + ++ +
Sbjct: 78 VKHPFIVDLIYA-----FQTGGKLYLILEYLSGGEL--FMQLEREGI----FMEDTACFY 126
Query: 237 AVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK---FLPEATNNF-- 291
+++ AL +LH + I++ DLKP N++L+ + + DFGL K T+ F
Sbjct: 127 LAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCG 183
Query: 292 -FNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTG 334
+ E M S + + D +S G L+ + TG P FTG
Sbjct: 184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP----FTG 223
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 244 LDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYGMGS 303
L Y+H I+H DLKPSNV ++ + + DFGLA+ +A + +
Sbjct: 144 LKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEEMTGYVATRWYRAP 197
Query: 304 EV-------STSGDVYSFGILLLETFTGKR--PTNEMFTGNLTLHNFVKEALPERLAEI 353
E+ + + D++S G ++ E GK P ++ + V PE LA+I
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKI 256
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 18/134 (13%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
++ E G L +L N+ +LK L L+ ++ + A+ YL VH D+
Sbjct: 85 IIMELYPYGELGHYLERNKNSLKVLTLVL---YSLQICKAMAYLE---SINCVHRDIAVR 138
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEY---GMGSE------VSTSGDVYSF 314
N+L+ +GDFGL++++ + +++ + M E +T+ DV+ F
Sbjct: 139 NILVASPECVKLGDFGLSRYIED--EDYYKASVTRLPIKWMSPESINFRRFTTASDVWMF 196
Query: 315 GILLLETFT-GKRP 327
+ + E + GK+P
Sbjct: 197 AVCMWEILSFGKQP 210
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 247 LHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK-------FLPEATNNFFNFQIAEY 299
+ H I+H DLKPSN+++ + T + DFGLA+ P ++
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 300 GMGSEVSTSGDVYSFGILLLETFTGK 325
GMG + + D++S G ++ E K
Sbjct: 199 GMGYKENV--DIWSVGCIMGEMVRHK 222
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 247 LHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK-------FLPEATNNFFNFQIAEY 299
+ H I+H DLKPSN+++ + T + DFGLA+ P ++
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 199
Query: 300 GMGSEVSTSGDVYSFGILLLETFTGK 325
GMG + + D++S G ++ E K
Sbjct: 200 GMGYKENV--DIWSVGCIMGEMVRHK 223
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 61/144 (42%), Gaps = 25/144 (17%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREAL--KNLNLLQRLSIAVDVASALDYLHHYCET 253
F+ +D +V E SL E LH R+A+ R +I + YLH+
Sbjct: 111 FEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI-----QGVQYLHN---N 161
Query: 254 PIVHCDLKPSNVLLDGELTAHVGDFGLA----------KFLPEATNNFFNFQIAEYGMGS 303
++H DLK N+ L+ ++ +GDFGLA K L N + + G
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSF 221
Query: 304 EVSTSGDVYSFGILLLETFTGKRP 327
EV D++S G +L GK P
Sbjct: 222 EV----DIWSLGCILYTLLVGKPP 241
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 255 IVHCDLKPSNVLLDGELTAHVGDFGLAK-------FLPEATNNFFNFQIAEYGMGSEVST 307
I+H DLKPSN+++ + T + DFGLA+ P ++ GMG + +
Sbjct: 146 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 205
Query: 308 SGDVYSFGILLLETFTGK 325
D++S G ++ E K
Sbjct: 206 --DIWSVGCIMGEMVRHK 221
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 247 LHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK-------FLPEATNNFFNFQIAEY 299
+ H I+H DLKPSN+++ + T + DFGLA+ P ++
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 199
Query: 300 GMGSEVSTSGDVYSFGILLLETFTGK 325
GMG + + D++S G ++ E K
Sbjct: 200 GMGYKENV--DIWSVGCIMGEMVRHK 223
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 255 IVHCDLKPSNVLLDGELTAHVGDFGLAK-------FLPEATNNFFNFQIAEYGMGSEVST 307
I+H DLKPSN+++ + T + DFGLA+ P ++ GMG + +
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 200
Query: 308 SGDVYSFGILLLETFTGK 325
D++S G ++ E K
Sbjct: 201 --DIWSVGCIMGEMVRHK 216
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 18/134 (13%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
++ E G L +L N+ +LK L L+ ++ + A+ YL VH D+
Sbjct: 89 IIMELYPYGELGHYLERNKNSLKVLTLVL---YSLQICKAMAYLE---SINCVHRDIAVR 142
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEY---GMGSE------VSTSGDVYSF 314
N+L+ +GDFGL++++ + +++ + M E +T+ DV+ F
Sbjct: 143 NILVASPECVKLGDFGLSRYIED--EDYYKASVTRLPIKWMSPESINFRRFTTASDVWMF 200
Query: 315 GILLLETFT-GKRP 327
+ + E + GK+P
Sbjct: 201 AVCMWEILSFGKQP 214
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 255 IVHCDLKPSNVLLDGELTAHVGDFGLAK-------FLPEATNNFFNFQIAEYGMGSEVST 307
I+H DLKPSN+++ + T + DFGLA+ P ++ GMG + +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 308 SGDVYSFGILLLETFTGK 325
D++S G ++ E K
Sbjct: 207 --DIWSVGCIMGEMVRHK 222
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 255 IVHCDLKPSNVLLDGELTAHVGDFGLAK-------FLPEATNNFFNFQIAEYGMGSEVST 307
I+H DLKPSN+++ + T + DFGLA+ P ++ GMG + +
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 200
Query: 308 SGDVYSFGILLLETFTGK 325
D++S G ++ E K
Sbjct: 201 --DIWSVGCIMGEMVRHK 216
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 15/135 (11%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
L+ + M G L +++ RE N+ L+ V +A ++YL + +VH DL
Sbjct: 93 LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAAR 146
Query: 264 NVLLDGELTAHVGDFGLAKFLPEATNNF--------FNFQIAEYGMGSEVSTSGDVYSFG 315
NVL+ + DFG AK L + + E + + DV+S+G
Sbjct: 147 NVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 206
Query: 316 ILLLETFT-GKRPTN 329
+ + E T G +P +
Sbjct: 207 VTVWELMTFGSKPYD 221
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 255 IVHCDLKPSNVLLDGELTAHVGDFGLAK-------FLPEATNNFFNFQIAEYGMGSEVST 307
I+H DLKPSN+++ + T + DFGLA+ P ++ GMG + +
Sbjct: 140 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 199
Query: 308 SGDVYSFGILLLETFTGK 325
D++S G ++ E K
Sbjct: 200 --DIWSVGCIMGEMVRHK 215
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 25/144 (17%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREAL--KNLNLLQRLSIAVDVASALDYLHHYCET 253
F+ +D +V E SL E LH R+A+ R +I + YLH+
Sbjct: 111 FEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI-----QGVQYLHN---N 161
Query: 254 PIVHCDLKPSNVLLDGELTAHVGDFGLA---KFLPE------ATNNFFNFQI-AEYGMGS 303
++H DLK N+ L+ ++ +GDFGLA +F E T N+ ++ + G
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSF 221
Query: 304 EVSTSGDVYSFGILLLETFTGKRP 327
EV D++S G +L GK P
Sbjct: 222 EV----DIWSLGCILYTLLVGKPP 241
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 244 LDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYGMGS 303
L Y+H I+H DLKPSNV ++ + + DFGLA+ +A + +
Sbjct: 144 LKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEEMTGYVATRWYRAP 197
Query: 304 EV-------STSGDVYSFGILLLETFTGKR--PTNEMFTGNLTLHNFVKEALPERLAEI 353
E+ + + D++S G ++ E GK P ++ + V PE LA+I
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKI 256
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 17/108 (15%)
Query: 178 FIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQR---L 234
++ RN VK T+ + + + E+ N +L + +H +NLN QR
Sbjct: 71 WLERRNFVKPXTAV-----KKKSTLFIQXEYCENRTLYDLIHS-----ENLNQ-QRDEYW 119
Query: 235 SIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK 282
+ + AL Y+H I+H +LKP N+ +D +GDFGLAK
Sbjct: 120 RLFRQILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAK 164
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 17/116 (14%)
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFNFQIA 297
++ ALDY H I+H D+KP NVL+D E + D+GLA+F +N ++A
Sbjct: 139 EILKALDYCH---SMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVA 193
Query: 298 -EYGMGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEA 345
Y G E+ S D++S G +L K P F G+ V+ A
Sbjct: 194 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQLVRIA 246
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 99/222 (44%), Gaps = 38/222 (17%)
Query: 121 GAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180
G + + NKL+G++ + L+++ ++ +PS+ I + L + +
Sbjct: 20 GVVYKARNKLTGEV-------VALKKIRLDTE--TEGVPST-----AIREISLLKE--LN 63
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + + LV+E V+ L++++ + AL + L S +
Sbjct: 64 HPNIVKLLDVIHT-----ENKLYLVFEH-VDQDLKKFM--DASALTGIPLPLIKSYLFQL 115
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYG 300
L + H + ++H DLKP N+L++ E + DFGLA+ + + + +
Sbjct: 116 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGN 335
E+ ST+ D++S G + E T + +F G+
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 210
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 22/141 (15%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS------IAVDVASALDYLHH 249
F+ N + +V E+M G + +L + R S A + +YLH
Sbjct: 110 FKDNSNLYMVMEYMPGGDM----------FSHLRRIGRFSEPHARFYAAQIVLTFEYLH- 158
Query: 250 YCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVS 306
+++ DLKP N+L+D + V DFG AK + T + E + +
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 307 TSGDVYSFGILLLETFTGKRP 327
+ D ++ G+L+ E G P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPP 237
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 22/141 (15%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS------IAVDVASALDYLHH 249
F+ N + +V E+M G + +L + R S A + +YLH
Sbjct: 110 FKDNSNLYMVMEYMPGGDM----------FSHLRRIGRFSEPHARFYAAQIVLTFEYLH- 158
Query: 250 YCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVS 306
+++ DLKP N+L+D + V DFG AK + T + E + +
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 307 TSGDVYSFGILLLETFTGKRP 327
+ D ++ G+L+ E G P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPP 237
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 234 LSIAVDVASALDYL--HHYCETPIVHCDLKPSNVLLDGELTAHVGDFGL------AKFLP 285
+ + +A+ ++YL HH +VH DL NVL+ +L + D GL A +
Sbjct: 148 VHLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYK 202
Query: 286 EATNNFF--NFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
N+ + E M + S D++S+G++L E F+
Sbjct: 203 LLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 26/164 (15%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS--I 236
++H +V +I + FQ L+ E++ G L ++ RE + ++ +
Sbjct: 78 VKHPFIVDLIYA-----FQTGGKLYLILEYLSGGEL--FMQLEREGI----FMEDTACFY 126
Query: 237 AVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK---FLPEATNNF-- 291
+++ AL +LH + I++ DLKP N++L+ + + DFGL K T+ F
Sbjct: 127 LAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCG 183
Query: 292 -FNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTG 334
+ E M S + + D +S G L+ + TG P FTG
Sbjct: 184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP----FTG 223
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 247 LHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK-------FLPEATNNFFNFQIAEY 299
+ H I+H DLKPSN+++ + T + DFGLA+ P ++
Sbjct: 177 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 236
Query: 300 GMGSEVSTSGDVYSFGILLLETFTGK 325
GMG + + D++S G ++ E K
Sbjct: 237 GMGYKENV--DIWSVGCIMGEMVRHK 260
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 255 IVHCDLKPSNVLLDGELTAHVGDFGLAK-------FLPEATNNFFNFQIAEYGMGSEVST 307
I+H DLKPSN+++ + T + DFGLA+ P ++ GMG + +
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 244
Query: 308 SGDVYSFGILLLETFTGK 325
D++S G ++ E K
Sbjct: 245 --DIWSVGCIMGEMVRHK 260
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 17/116 (14%)
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFNFQIA 297
++ ALDY H I+H D+KP NV++D E + D+GLA+F +N ++A
Sbjct: 139 EILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVA 193
Query: 298 -EYGMGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEA 345
Y G E+ S D++S G +L K P F G+ V+ A
Sbjct: 194 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQLVRIA 246
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 68/159 (42%), Gaps = 22/159 (13%)
Query: 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS 235
+ +RH N++++ F L+ E+ G++ L + L + + +
Sbjct: 64 QSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTAT 114
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA-------T 288
++A+AL Y H ++H D+KP N+LL + +FG + P + T
Sbjct: 115 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGT 171
Query: 289 NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
++ ++ E M E D++S G+L E GK P
Sbjct: 172 LDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVGKPP 207
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 213 SLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELT 272
+L++W++ R +L++ L I + +A A+++LH ++H DLKPSN+ +
Sbjct: 147 NLKDWMN-RRCSLEDREHGVCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDV 202
Query: 273 AHVGDFGLA 281
VGDFGL
Sbjct: 203 VKVGDFGLV 211
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 13/138 (9%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255
FQ +D V E+ G L + H +RE + + ++ SAL+YLH +
Sbjct: 74 FQTHDRLCFVMEYANGGEL--FFHLSRERV--FTEERARFYGAEIVSALEYLH---SRDV 126
Query: 256 VHCDLKPSNVLLDGELTAHVGDFGLAK--FLPEATNNFF----NFQIAEYGMGSEVSTSG 309
V+ D+K N++LD + + DFGL K AT F + E ++ +
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAV 186
Query: 310 DVYSFGILLLETFTGKRP 327
D + G+++ E G+ P
Sbjct: 187 DWWGLGVVMYEMMCGRLP 204
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 234 LSIAVDVASALDYL--HHYCETPIVHCDLKPSNVLLDGELTAHVGDFGL------AKFLP 285
+ + +A+ ++YL HH +VH DL NVL+ +L + D GL A +
Sbjct: 131 VHLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYK 185
Query: 286 EATNNFF--NFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
N+ + E M + S D++S+G++L E F+
Sbjct: 186 LLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 22/141 (15%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS------IAVDVASALDYLHH 249
F+ N + +V E++ G E +L + R S A + +YLH
Sbjct: 110 FKDNSNLYMVMEYVAGG----------EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH- 158
Query: 250 YCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVS 306
+++ DLKP N+L+D + V DFG AK + T + E + +
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPEYLAPEIILSKGYN 216
Query: 307 TSGDVYSFGILLLETFTGKRP 327
+ D ++ G+L+ E G P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPP 237
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 13/138 (9%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255
FQ +D V E+ G L + H +RE + + ++ SAL+YLH +
Sbjct: 74 FQTHDRLCFVMEYANGGEL--FFHLSRERV--FTEERARFYGAEIVSALEYLH---SRDV 126
Query: 256 VHCDLKPSNVLLDGELTAHVGDFGLAK--FLPEATNNFF----NFQIAEYGMGSEVSTSG 309
V+ D+K N++LD + + DFGL K AT F + E ++ +
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAV 186
Query: 310 DVYSFGILLLETFTGKRP 327
D + G+++ E G+ P
Sbjct: 187 DWWGLGVVMYEMMCGRLP 204
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 225 LKNLNLLQRLSIAVD--VASALDY-----LHHYCETPIVHCDLKPSNVLLDGELTAHVGD 277
L + NL Q + + +D S L Y + H I+H DLKPSN+++ + T + D
Sbjct: 115 LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILD 174
Query: 278 FGLAK-------FLPEATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGK 325
FGLA+ P ++ GMG + + D++S G ++ E K
Sbjct: 175 FGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV--DLWSVGCIMGEMVCHK 227
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 68/163 (41%), Gaps = 27/163 (16%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLH-------PNREALKNL----- 228
H N+V ++ +C + ++ EF G+L +L P +EA ++L
Sbjct: 92 HLNVVNLLGACT----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFL 147
Query: 229 NLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT 288
L + + VA +++L +H DL N+LL + + DFGLA+ + +
Sbjct: 148 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 204
Query: 289 NNF--------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + E + DV+SFG+LL E F+
Sbjct: 205 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 17/116 (14%)
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFNFQIA 297
++ ALDY H I+H D+KP NV++D E + D+GLA+F +N ++A
Sbjct: 139 EILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVA 193
Query: 298 -EYGMGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEA 345
Y G E+ S D++S G +L K P F G+ V+ A
Sbjct: 194 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQLVRIA 246
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 13/138 (9%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255
FQ +D V E+ G L + H +RE + + ++ SAL+YLH +
Sbjct: 74 FQTHDRLCFVMEYANGGEL--FFHLSRERV--FTEERARFYGAEIVSALEYLH---SRDV 126
Query: 256 VHCDLKPSNVLLDGELTAHVGDFGLAK--FLPEATNNFF----NFQIAEYGMGSEVSTSG 309
V+ D+K N++LD + + DFGL K AT F + E ++ +
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAV 186
Query: 310 DVYSFGILLLETFTGKRP 327
D + G+++ E G+ P
Sbjct: 187 DWWGLGVVMYEMMCGRLP 204
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 20/158 (12%)
Query: 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS 235
+ +RH N++++ F L+ E+ G++ L + L + + +
Sbjct: 66 QSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL----QKLSRFDEQRTAT 116
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLL--DGELTAHVGDFGLAKFLPEATNN--- 290
++A+AL Y H ++H D+KP N+LL +GEL + DFG + P + +
Sbjct: 117 YITELANALSYCH---SKRVIHRDIKPENLLLGSNGELK--IADFGWSVHAPSSRRDTLC 171
Query: 291 -FFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
++ E G D++S G+L E G P
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 17/116 (14%)
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFNFQIA 297
++ ALDY H I+H D+KP NV++D E + D+GLA+F +N ++A
Sbjct: 139 EILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVA 193
Query: 298 -EYGMGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEA 345
Y G E+ S D++S G +L K P F G+ V+ A
Sbjct: 194 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQLVRIA 246
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 17/116 (14%)
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFNFQIA 297
++ ALDY H I+H D+KP NV++D E + D+GLA+F +N ++A
Sbjct: 139 EILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVA 193
Query: 298 -EYGMGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEA 345
Y G E+ S D++S G +L K P F G+ V+ A
Sbjct: 194 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQLVRIA 246
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 17/116 (14%)
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFNFQIA 297
++ ALDY H I+H D+KP NV++D E + D+GLA+F +N ++A
Sbjct: 139 EILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVA 193
Query: 298 -EYGMGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEA 345
Y G E+ S D++S G +L K P F G+ V+ A
Sbjct: 194 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQLVRIA 246
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 19/127 (14%)
Query: 155 RGNIPSSLSSLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSL 214
RG I + ++ LD H N+VK++ +D D +V+E + G +
Sbjct: 77 RGPIEQVYQEIAILKKLD--------HPNVVKLVEV---LDDPNEDHLYMVFELVNQGPV 125
Query: 215 EEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAH 274
E LK L+ Q D+ ++YLH+ I+H D+KPSN+L+ +
Sbjct: 126 ME-----VPTLKPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIK 177
Query: 275 VGDFGLA 281
+ DFG++
Sbjct: 178 IADFGVS 184
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 220 PNREALKNLNLLQRLS------IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA 273
P E +L + R S A + +YLH +++ DLKP N+++D +
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYI 180
Query: 274 HVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
V DFGLAK + T + E + + + D ++ G+L+ E G P
Sbjct: 181 QVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 17/116 (14%)
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFNFQIA 297
++ ALDY H I+H D+KP NV++D E + D+GLA+F +N ++A
Sbjct: 139 EILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVA 193
Query: 298 -EYGMGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEA 345
Y G E+ S D++S G +L K P F G+ V+ A
Sbjct: 194 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQLVRIA 246
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 17/116 (14%)
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFNFQIA 297
++ ALDY H I+H D+KP NV++D E + D+GLA+F +N ++A
Sbjct: 139 EILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVA 193
Query: 298 -EYGMGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEA 345
Y G E+ S D++S G +L K P F G+ V+ A
Sbjct: 194 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQLVRIA 246
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 13/138 (9%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255
FQ +D V E+ G L + H +RE + + ++ SAL+YLH +
Sbjct: 77 FQTHDRLCFVMEYANGGEL--FFHLSRERV--FTEERARFYGAEIVSALEYLH---SRDV 129
Query: 256 VHCDLKPSNVLLDGELTAHVGDFGLAK--FLPEATNNFF----NFQIAEYGMGSEVSTSG 309
V+ D+K N++LD + + DFGL K AT F + E ++ +
Sbjct: 130 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAV 189
Query: 310 DVYSFGILLLETFTGKRP 327
D + G+++ E G+ P
Sbjct: 190 DWWGLGVVMYEMMCGRLP 207
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 33/161 (20%)
Query: 206 YEFMV----NGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLK 261
Y +MV N L WL + K+++ +R S ++ A+ +H + IVH DLK
Sbjct: 86 YIYMVMECGNIDLNSWL----KKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLK 138
Query: 262 PSNVLL-DGELTAHVGDFGLA-KFLPEATNNFFNFQIAEYGMG-----SEVSTS------ 308
P+N L+ DG L + DFG+A + P+ T+ + Q+ ++S+S
Sbjct: 139 PANFLIVDGMLK--LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKS 196
Query: 309 -------GDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFV 342
DV+S G +L GK P ++ LH +
Sbjct: 197 KSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 237
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 17/116 (14%)
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFNFQIA 297
++ ALDY H I+H D+KP NV++D E + D+GLA+F +N ++A
Sbjct: 139 EILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVA 193
Query: 298 -EYGMGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEA 345
Y G E+ S D++S G +L K P F G+ V+ A
Sbjct: 194 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQLVRIA 246
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 17/116 (14%)
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFNFQIA 297
++ ALDY H I+H D+KP NV++D E + D+GLA+F +N ++A
Sbjct: 139 EILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVA 193
Query: 298 -EYGMGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEA 345
Y G E+ S D++S G +L K P F G+ V+ A
Sbjct: 194 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQLVRIA 246
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 13/138 (9%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255
FQ +D V E+ G L + H +RE + + ++ SAL+YLH +
Sbjct: 74 FQTHDRLCFVMEYANGGEL--FFHLSRERV--FTEERARFYGAEIVSALEYLH---SRDV 126
Query: 256 VHCDLKPSNVLLDGELTAHVGDFGLAK--FLPEATNNFF----NFQIAEYGMGSEVSTSG 309
V+ D+K N++LD + + DFGL K AT F + E ++ +
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAV 186
Query: 310 DVYSFGILLLETFTGKRP 327
D + G+++ E G+ P
Sbjct: 187 DWWGLGVVMYEMMCGRLP 204
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 78/180 (43%), Gaps = 29/180 (16%)
Query: 132 GQIPSSIGSCIRLEQLVMNGNF-------FRG-----NIPSSLSSLRGIENLDLSRNNFI 179
G + S+I I L++ + G F +RG I SS ++ + +
Sbjct: 1 GAMGSTIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVML 60
Query: 180 RHRNLVKIITSCASVDFQGNDSEA---LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSI 236
RH N++ I + D + N + LV ++ +GSL ++L NR + +++ +
Sbjct: 61 RHENILGFIAA----DNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIK---L 111
Query: 237 AVDVASALDYLHHYC-----ETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF 291
A+ AS L +LH + I H DLK N+L+ T + D GLA AT+
Sbjct: 112 ALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTI 171
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 33/161 (20%)
Query: 206 YEFMV----NGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLK 261
Y +MV N L WL + K+++ +R S ++ A+ +H + IVH DLK
Sbjct: 130 YIYMVMECGNIDLNSWL----KKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLK 182
Query: 262 PSNVLL-DGELTAHVGDFGLA-KFLPEATNNFFNFQIAEYGMG-----SEVSTS------ 308
P+N L+ DG L + DFG+A + P+ T+ + Q+ ++S+S
Sbjct: 183 PANFLIVDGMLK--LIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKS 240
Query: 309 -------GDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFV 342
DV+S G +L GK P ++ LH +
Sbjct: 241 KSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 281
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 13/138 (9%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255
FQ +D V E+ G L + H +RE + + ++ SAL+YLH +
Sbjct: 79 FQTHDRLCFVMEYANGGEL--FFHLSRERV--FTEERARFYGAEIVSALEYLH---SRDV 131
Query: 256 VHCDLKPSNVLLDGELTAHVGDFGLAK--FLPEATNNFF----NFQIAEYGMGSEVSTSG 309
V+ D+K N++LD + + DFGL K AT F + E ++ +
Sbjct: 132 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAV 191
Query: 310 DVYSFGILLLETFTGKRP 327
D + G+++ E G+ P
Sbjct: 192 DWWGLGVVMYEMMCGRLP 209
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 17/116 (14%)
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFNFQIA 297
++ ALDY H I+H D+KP NV++D E + D+GLA+F +N ++A
Sbjct: 138 EILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVA 192
Query: 298 -EYGMGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEA 345
Y G E+ S D++S G +L K P F G+ V+ A
Sbjct: 193 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQLVRIA 245
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 13/138 (9%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255
FQ +D V E+ G L + H +RE + + ++ SAL+YLH +
Sbjct: 74 FQTHDRLCFVMEYANGGEL--FFHLSRERV--FTEERARFYGAEIVSALEYLH---SRDV 126
Query: 256 VHCDLKPSNVLLDGELTAHVGDFGLAK--FLPEATNNFF----NFQIAEYGMGSEVSTSG 309
V+ D+K N++LD + + DFGL K AT F + E ++ +
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAV 186
Query: 310 DVYSFGILLLETFTGKRP 327
D + G+++ E G+ P
Sbjct: 187 DWWGLGVVMYEMMCGRLP 204
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 68/159 (42%), Gaps = 22/159 (13%)
Query: 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS 235
+ +RH N++++ F L+ E+ G++ L + L + + +
Sbjct: 65 QSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTAT 115
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA-------T 288
++A+AL Y H ++H D+KP N+LL + +FG + P + T
Sbjct: 116 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGT 172
Query: 289 NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
++ ++ E M E D++S G+L E GK P
Sbjct: 173 LDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVGKPP 208
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 17/116 (14%)
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFNFQIA 297
++ ALDY H I+H D+KP NV++D E + D+GLA+F +N ++A
Sbjct: 138 EILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVA 192
Query: 298 -EYGMGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEA 345
Y G E+ S D++S G +L K P F G+ V+ A
Sbjct: 193 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQLVRIA 245
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 17/116 (14%)
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFNFQIA 297
++ ALDY H I+H D+KP NV++D E + D+GLA+F +N ++A
Sbjct: 144 EILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVA 198
Query: 298 -EYGMGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEA 345
Y G E+ S D++S G +L K P F G+ V+ A
Sbjct: 199 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQLVRIA 251
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 33/161 (20%)
Query: 206 YEFMV----NGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLK 261
Y +MV N L WL + K+++ +R S ++ A+ +H + IVH DLK
Sbjct: 130 YIYMVMECGNIDLNSWL----KKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLK 182
Query: 262 PSNVLL-DGELTAHVGDFGLA-KFLPEATNNFFNFQIAEYGMG-----SEVSTS------ 308
P+N L+ DG L + DFG+A + P+ T+ + Q+ ++S+S
Sbjct: 183 PANFLIVDGMLK--LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKS 240
Query: 309 -------GDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFV 342
DV+S G +L GK P ++ LH +
Sbjct: 241 KSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 281
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 255 IVHCDLKPSNVLLDGELTAHVGDFGLAK-------FLPEATNNFFNFQIAEYGMGSEVST 307
I+H DLKPSN+++ + T + DFGLA+ P ++ GMG + +
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 200
Query: 308 SGDVYSFGILLLETFTGK 325
D++S G ++ E K
Sbjct: 201 --DLWSVGCIMGEMVCHK 216
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 19/154 (12%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N++K+ F+ LV EF G L E + NR + +I +
Sbjct: 105 HPNIIKLFDV-----FEDKKYFYLVTEFYEGGELFEQI-INRHKFDECDAA---NIMKQI 155
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGE---LTAHVGDFGLAKFLPEATNNFFN---- 293
S + YLH + IVH D+KP N+LL+ + L + DFGL+ F +
Sbjct: 156 LSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTA 212
Query: 294 FQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
+ IA + + + DV+S G+++ G P
Sbjct: 213 YYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 22/185 (11%)
Query: 158 IPSSLSSLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEW 217
IP S + +++ + ++H+N+V+ + S F N + E + GSL
Sbjct: 55 IPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS-----FSENGFIKIFMEQVPGGSLSAL 109
Query: 218 LHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLD---GELTAH 274
L LK+ +I L+ L + + IVH D+K NVL++ G L
Sbjct: 110 LRSKWGPLKD----NEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLK-- 163
Query: 275 VGDFGLAKFLPEATNNFFNFQIAEYGMGSEVSTSG--------DVYSFGILLLETFTGKR 326
+ DFG +K L F M E+ G D++S G ++E TGK
Sbjct: 164 ISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKP 223
Query: 327 PTNEM 331
P E+
Sbjct: 224 PFYEL 228
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 220 PNREALKNLNLLQRLS------IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA 273
P E +L + R S A + +YLH +++ DLKP N+L+D +
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI 180
Query: 274 HVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
V DFG AK + T + E + + + D ++ G+L+ E G P
Sbjct: 181 KVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 33/161 (20%)
Query: 206 YEFMV----NGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLK 261
Y +MV N L WL + K+++ +R S ++ A+ +H + IVH DLK
Sbjct: 130 YIYMVMECGNIDLNSWL----KKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLK 182
Query: 262 PSNVLL-DGELTAHVGDFGLA-KFLPEATNNFFNFQIAEYGMG-----SEVSTS------ 308
P+N L+ DG L + DFG+A + P+ T+ + Q+ ++S+S
Sbjct: 183 PANFLIVDGMLK--LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKS 240
Query: 309 -------GDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFV 342
DV+S G +L GK P ++ LH +
Sbjct: 241 KSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 281
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 22/141 (15%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS------IAVDVASALDYLHH 249
F+ N + +V E++ G E +L + R S A + +YLH
Sbjct: 110 FKDNSNLYMVMEYVAGG----------EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH- 158
Query: 250 YCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVS 306
+++ DLKP N+L+D + V DFG AK + T + E + +
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPEYLAPEIILSKGYN 216
Query: 307 TSGDVYSFGILLLETFTGKRP 327
+ D ++ G+L+ E G P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPP 237
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 17/116 (14%)
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFNFQIA 297
++ ALDY H I+H D+KP NV++D E + D+GLA+F +N ++A
Sbjct: 137 EILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVA 191
Query: 298 -EYGMGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEA 345
Y G E+ S D++S G +L K P F G+ V+ A
Sbjct: 192 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQLVRIA 244
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 19/131 (14%)
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLL---DGELTAHVGDFGLAKFLPE--------ATNNF 291
A+ YLH E I+H DLKP NVLL + + + DFG +K L E T +
Sbjct: 126 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 182
Query: 292 FNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEA----LP 347
++ + + + D +S G++L +G P +E T ++L + + +P
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT-QVSLKDQITSGKYNFIP 241
Query: 348 ERLAEIVDPVL 358
E AE+ + L
Sbjct: 242 EVWAEVSEKAL 252
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 22/185 (11%)
Query: 158 IPSSLSSLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEW 217
IP S + +++ + ++H+N+V+ + S F N + E + GSL
Sbjct: 41 IPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS-----FSENGFIKIFMEQVPGGSLSAL 95
Query: 218 LHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLD---GELTAH 274
L LK+ +I L+ L + + IVH D+K NVL++ G L
Sbjct: 96 LRSKWGPLKD----NEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLK-- 149
Query: 275 VGDFGLAKFLPEATNNFFNFQIAEYGMGSEVSTSG--------DVYSFGILLLETFTGKR 326
+ DFG +K L F M E+ G D++S G ++E TGK
Sbjct: 150 ISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKP 209
Query: 327 PTNEM 331
P E+
Sbjct: 210 PFYEL 214
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 19/131 (14%)
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLL---DGELTAHVGDFGLAKFLPE--------ATNNF 291
A+ YLH E I+H DLKP NVLL + + + DFG +K L E T +
Sbjct: 126 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 182
Query: 292 FNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEA----LP 347
++ + + + D +S G++L +G P +E T ++L + + +P
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT-QVSLKDQITSGKYNFIP 241
Query: 348 ERLAEIVDPVL 358
E AE+ + L
Sbjct: 242 EVWAEVSEKAL 252
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 220 PNREALKNLNLLQRLS------IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA 273
P E +L + R S A + +YLH +++ DLKP N+L+D +
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI 181
Query: 274 HVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
V DFG AK + T + E + + + D ++ G+L+ E G P
Sbjct: 182 QVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 33/161 (20%)
Query: 206 YEFMV----NGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLK 261
Y +MV N L WL + K+++ +R S ++ A+ +H + IVH DLK
Sbjct: 82 YIYMVMECGNIDLNSWL----KKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLK 134
Query: 262 PSNVLL-DGELTAHVGDFGLA-KFLPEATNNFFNFQIAEYGMG-----SEVSTS------ 308
P+N L+ DG L + DFG+A + P+ T+ + Q+ ++S+S
Sbjct: 135 PANFLIVDGMLK--LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKS 192
Query: 309 -------GDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFV 342
DV+S G +L GK P ++ LH +
Sbjct: 193 KSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 233
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 71/161 (44%), Gaps = 26/161 (16%)
Query: 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS 235
+ +RH N++++ F L+ E+ G++ L + L + + +
Sbjct: 66 QSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL----QKLSRFDEQRTAT 116
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLL--DGELTAHVGDFGLAKFLPEA------ 287
++A+AL Y H ++H D+KP N+LL +GEL + DFG + P +
Sbjct: 117 YITELANALSYCH---SKRVIHRDIKPENLLLGSNGELK--IADFGWSVHAPSSRRTTLC 171
Query: 288 -TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
T ++ ++ E M E D++S G+L E G P
Sbjct: 172 GTLDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVGMPP 209
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 220 PNREALKNLNLLQRLS------IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA 273
P E +L + R S A + +YLH +++ DLKP N+L+D +
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI 181
Query: 274 HVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
V DFG AK + T + E + + + D ++ G+L+ E G P
Sbjct: 182 KVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 19/131 (14%)
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLL---DGELTAHVGDFGLAKFLPE--------ATNNF 291
A+ YLH E I+H DLKP NVLL + + + DFG +K L E T +
Sbjct: 132 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 188
Query: 292 FNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEA----LP 347
++ + + + D +S G++L +G P +E T ++L + + +P
Sbjct: 189 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT-QVSLKDQITSGKYNFIP 247
Query: 348 ERLAEIVDPVL 358
E AE+ + L
Sbjct: 248 EVWAEVSEKAL 258
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 22/141 (15%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS------IAVDVASALDYLHH 249
F+ N + +V E++ G E +L + R S A + +YLH
Sbjct: 111 FKDNSNLYMVMEYVAGG----------EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH- 159
Query: 250 YCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVS 306
+++ DLKP N+L+D + V DFG AK + T + E + +
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 307 TSGDVYSFGILLLETFTGKRP 327
+ D ++ G+L+ E G P
Sbjct: 218 KAVDWWALGVLIYEMAAGYPP 238
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 19/131 (14%)
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLL---DGELTAHVGDFGLAKFLPE--------ATNNF 291
A+ YLH E I+H DLKP NVLL + + + DFG +K L E T +
Sbjct: 125 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 181
Query: 292 FNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEA----LP 347
++ + + + D +S G++L +G P +E T ++L + + +P
Sbjct: 182 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT-QVSLKDQITSGKYNFIP 240
Query: 348 ERLAEIVDPVL 358
E AE+ + L
Sbjct: 241 EVWAEVSEKAL 251
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 19/131 (14%)
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLL---DGELTAHVGDFGLAKFLPE--------ATNNF 291
A+ YLH E I+H DLKP NVLL + + + DFG +K L E T +
Sbjct: 126 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 182
Query: 292 FNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEA----LP 347
++ + + + D +S G++L +G P +E T ++L + + +P
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT-QVSLKDQITSGKYNFIP 241
Query: 348 ERLAEIVDPVL 358
E AE+ + L
Sbjct: 242 EVWAEVSEKAL 252
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 220 PNREALKNLNLLQRLS------IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA 273
P E +L + R S A + +YLH +++ DLKP N+L+D +
Sbjct: 110 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI 166
Query: 274 HVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
V DFG AK + T + E + + + D ++ G+L+ E G P
Sbjct: 167 QVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 33/161 (20%)
Query: 206 YEFMV----NGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLK 261
Y +MV N L WL + K+++ +R S ++ A+ +H + IVH DLK
Sbjct: 83 YIYMVMECGNIDLNSWL----KKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLK 135
Query: 262 PSNVLL-DGELTAHVGDFGLA-KFLPEATNNFFNFQIAEYGMG-----SEVSTS------ 308
P+N L+ DG L + DFG+A + P+ T+ + Q+ ++S+S
Sbjct: 136 PANFLIVDGMLK--LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKS 193
Query: 309 -------GDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFV 342
DV+S G +L GK P ++ LH +
Sbjct: 194 KSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 234
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 21/160 (13%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
+RH+N+++++ + + Q +V E+ V G ++E L E K + Q
Sbjct: 63 LRHKNVIQLVDVLYNEEKQ---KMYMVMEYCVCG-MQEMLDSVPE--KRFPVCQAHGYFC 116
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL-PEATNNFFN---- 293
+ L+YLH IVH D+KP N+LL T + G+A+ L P A ++
Sbjct: 117 QLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQG 173
Query: 294 ---FQIAEYGMGSEVSTSG---DVYSFGILLLETFTGKRP 327
FQ E G + + SG D++S G+ L TG P
Sbjct: 174 SPAFQPPEIANGLD-TFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 22/141 (15%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS------IAVDVASALDYLHH 249
F+ N + +V E++ G E +L + R S A + +YLH
Sbjct: 110 FKDNSNLYMVMEYVAGG----------EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH- 158
Query: 250 YCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVS 306
+++ DLKP N+L+D + V DFG AK + T + E + +
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 307 TSGDVYSFGILLLETFTGKRP 327
+ D ++ G+L+ E G P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPP 237
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 74/179 (41%), Gaps = 27/179 (15%)
Query: 163 SSLRGIENLDLSRN----NFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWL 218
SS RG+ ++ R IRH N++ + F+ L+ E + G L ++L
Sbjct: 45 SSRRGVSREEIEREVNILREIRHPNIITLHDI-----FENKTDVVLILELVSGGELFDFL 99
Query: 219 HPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNV-LLDGEL---TAH 274
+E+L Q L LD +H+ I H DLKP N+ LLD +
Sbjct: 100 -AEKESLTEDEATQFLK------QILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIK 152
Query: 275 VGDFGLAKFLPEATNNFFN------FQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
+ DFG+A + EA N F N F E + D++S G++ +G P
Sbjct: 153 LIDFGIAHKI-EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 22/141 (15%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS------IAVDVASALDYLHH 249
F+ N + +V E++ G E +L + R S A + +YLH
Sbjct: 110 FKDNSNLYMVMEYVAGG----------EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH- 158
Query: 250 YCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVS 306
+++ DLKP N+L+D + V DFG AK + T + E + +
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 307 TSGDVYSFGILLLETFTGKRP 327
+ D ++ G+L+ E G P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPP 237
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 22/141 (15%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS------IAVDVASALDYLHH 249
F+ N + +V E++ G E +L + R S A + +YLH
Sbjct: 110 FKDNSNLYMVMEYVAGG----------EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH- 158
Query: 250 YCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVS 306
+++ DLKP N+L+D + V DFG AK + T + E + +
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 307 TSGDVYSFGILLLETFTGKRP 327
+ D ++ G+L+ E G P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPP 237
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 220 PNREALKNLNLLQRLS------IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA 273
P E +L + R S A + +YLH +++ DLKP N+++D +
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYI 180
Query: 274 HVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
V DFGLAK + T + E + + + D ++ G+L+ E G P
Sbjct: 181 KVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 33/161 (20%)
Query: 206 YEFMV----NGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLK 261
Y +MV N L WL + K+++ +R S ++ A+ +H + IVH DLK
Sbjct: 102 YIYMVMECGNIDLNSWL----KKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLK 154
Query: 262 PSNVLL-DGELTAHVGDFGLA-KFLPEATNNFFNFQIAEYGMG-----SEVSTS------ 308
P+N L+ DG L + DFG+A + P+ T+ + Q+ ++S+S
Sbjct: 155 PANFLIVDGMLK--LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKS 212
Query: 309 -------GDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFV 342
DV+S G +L GK P ++ LH +
Sbjct: 213 KSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 253
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 22/141 (15%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS------IAVDVASALDYLHH 249
F+ N + +V E++ G E +L + R S A + +YLH
Sbjct: 97 FKDNSNLYMVMEYVAGG----------EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH- 145
Query: 250 YCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVS 306
+++ DLKP N+L+D + V DFG AK + T + E + +
Sbjct: 146 --SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 203
Query: 307 TSGDVYSFGILLLETFTGKRP 327
+ D ++ G+L+ E G P
Sbjct: 204 KAVDWWALGVLIYEMAAGYPP 224
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 22/141 (15%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS------IAVDVASALDYLHH 249
F+ N + +V E++ G E +L + R S A + +YLH
Sbjct: 110 FKDNSNLYMVMEYVAGG----------EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH- 158
Query: 250 YCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVS 306
+++ DLKP N+L+D + V DFG AK + T + E + +
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 307 TSGDVYSFGILLLETFTGKRP 327
+ D ++ G+L+ E G P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPP 237
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 252 ETPIVHCDLKPSNVLL--DGELTAHVGDFG----LAKFLPEATNNFFNFQIAEYGMGSEV 305
E I+HCDLKP N+LL + DFG L + + + + F ++ E +G
Sbjct: 177 ELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQSRF-YRSPEVLLGMPY 235
Query: 306 STSGDVYSFGILLLETFTGK 325
+ D++S G +L+E TG+
Sbjct: 236 DLAIDMWSLGCILVEMHTGE 255
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 220 PNREALKNLNLLQRLS------IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA 273
P E +L + R S A + +YLH +++ DLKP N+L+D +
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI 181
Query: 274 HVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
V DFG AK + T + E + + + D ++ G+L+ E G P
Sbjct: 182 QVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 74/179 (41%), Gaps = 27/179 (15%)
Query: 163 SSLRGIENLDLSRN----NFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWL 218
SS RG+ ++ R IRH N++ + F+ L+ E + G L ++L
Sbjct: 52 SSRRGVSREEIEREVNILREIRHPNIITLHDI-----FENKTDVVLILELVSGGELFDFL 106
Query: 219 HPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNV-LLDGEL---TAH 274
+E+L Q L LD +H+ I H DLKP N+ LLD +
Sbjct: 107 -AEKESLTEDEATQFLK------QILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIK 159
Query: 275 VGDFGLAKFLPEATNNFFN------FQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
+ DFG+A + EA N F N F E + D++S G++ +G P
Sbjct: 160 LIDFGIAHKI-EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 58/138 (42%), Gaps = 13/138 (9%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255
FQ D V EF+ G L + +R + + A ++ SAL +LH + I
Sbjct: 93 FQTPDRLFFVMEFVNGGDLMFHIQKSR----RFDEARARFYAAEIISALMFLH---DKGI 145
Query: 256 VHCDLKPSNVLLDGELTAHVGDFGLAK--FLPEATNNFF----NFQIAEYGMGSEVSTSG 309
++ DLK NVLLD E + DFG+ K T F ++ E +
Sbjct: 146 IYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAV 205
Query: 310 DVYSFGILLLETFTGKRP 327
D ++ G+LL E G P
Sbjct: 206 DWWAMGVLLYEMLCGHAP 223
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 22/141 (15%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS------IAVDVASALDYLHH 249
F+ N + +V E++ G E +L + R S A + +YLH
Sbjct: 110 FKDNSNLYMVMEYVAGG----------EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH- 158
Query: 250 YCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVS 306
+++ DLKP N+L+D + V DFG AK + T + E + +
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 307 TSGDVYSFGILLLETFTGKRP 327
+ D ++ G+L+ E G P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPP 237
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 22/141 (15%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS------IAVDVASALDYLHH 249
F+ N + +V E++ G E +L + R S A + +YLH
Sbjct: 110 FKDNSNLYMVMEYVAGG----------EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH- 158
Query: 250 YCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVS 306
+++ DLKP N+L+D + V DFG AK + T + E + +
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 307 TSGDVYSFGILLLETFTGKRP 327
+ D ++ G+L+ E G P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPP 237
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 220 PNREALKNLNLLQRLS------IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA 273
P E +L + R S A + +YLH +++ DLKP N+L+D +
Sbjct: 145 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI 201
Query: 274 HVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
V DFG AK + T + E + + + D ++ G+L+ E G P
Sbjct: 202 QVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 242 SALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYGM 301
L Y+H +VH DLKP N+ ++ + + DFGLA+ A + + +
Sbjct: 155 KGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYVVTRWYR 208
Query: 302 GSEVSTSG-------DVYSFGILLLETFTGK 325
EV S D++S G ++ E TGK
Sbjct: 209 APEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 220 PNREALKNLNLLQRLS------IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA 273
P E +L + R S A + +YLH +++ DLKP N+L+D +
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI 180
Query: 274 HVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
V DFG AK + T + E + + + D ++ G+L+ E G P
Sbjct: 181 QVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 98/222 (44%), Gaps = 38/222 (17%)
Query: 121 GAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180
G + + NKL+G++ + L+++ ++ +PS+ I + L + +
Sbjct: 16 GVVYKARNKLTGEV-------VALKKIRLDTE--TEGVPST-----AIREISLLKE--LN 59
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDV 240
H N+VK++ + + LV+E V+ L+ ++ + AL + L S +
Sbjct: 60 HPNIVKLLDVIHT-----ENKLYLVFEH-VHQDLKTFM--DASALTGIPLPLIKSYLFQL 111
Query: 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYG 300
L + H + ++H DLKP N+L++ E + DFGLA+ + + + +
Sbjct: 112 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 168
Query: 301 MGSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGN 335
E+ ST+ D++S G + E T + +F G+
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 206
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 220 PNREALKNLNLLQRLS------IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA 273
P E +L + R S A + +YLH +++ DLKP N+L+D +
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI 181
Query: 274 HVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
V DFG AK + T + E + + + D ++ G+L+ E G P
Sbjct: 182 QVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 18/109 (16%)
Query: 244 LDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL---PEATNNFFNFQIAEYG 300
L Y+H ++H DLKPSN+L++ +GDFG+A+ L P F +A
Sbjct: 172 LKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 228
Query: 301 MGS--------EVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNF 341
+ E + + D++S G + E + ++F G +H
Sbjct: 229 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR----QLFPGKNYVHQL 273
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 220 PNREALKNLNLLQRLS------IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA 273
P E +L + R S A + +YLH +++ DLKP N+L+D +
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI 181
Query: 274 HVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
V DFG AK + T + E + + + D ++ G+L+ E G P
Sbjct: 182 QVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 220 PNREALKNLNLLQRLS------IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA 273
P E +L + R S A + +YLH +++ DLKP N+L+D +
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI 181
Query: 274 HVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
V DFG AK + T + E + + + D ++ G+L+ E G P
Sbjct: 182 QVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 59/143 (41%), Gaps = 26/143 (18%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS------IAVDVASALDYLHH 249
F+ N + +V E++ G E +L + R S A + +YLH
Sbjct: 110 FKDNSNLYMVMEYVAGG----------EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH- 158
Query: 250 YCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYGMGSEVSTSG 309
+++ DLKP N+L+D + V DFG AK + T EY + + + G
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG--TPEYLAPAIILSKG 214
Query: 310 -----DVYSFGILLLETFTGKRP 327
D ++ G+L+ E G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 64/161 (39%), Gaps = 22/161 (13%)
Query: 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWL--HPNREALKNLNLLQR 233
+ +RH N++++ F L+ EF G L + L H + ++ ++
Sbjct: 69 QSHLRHPNILRMYNY-----FHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE 123
Query: 234 LSIAVDVASALDYLHHYC-ETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF- 291
L+ A+ HYC E ++H D+KP N+L+ + + DFG + P
Sbjct: 124 LADAL----------HYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXM 173
Query: 292 ---FNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTN 329
++ E G D++ G+L E G P +
Sbjct: 174 CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 23/101 (22%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL-------------PE 286
+ SA+ Y H + IVH DLK N+LLD + + DFG + P
Sbjct: 122 IVSAVQYCH---QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPY 178
Query: 287 ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
A FQ +Y G EV DV+S G++L +G P
Sbjct: 179 AAPEL--FQGKKYD-GPEV----DVWSLGVILYTLVSGSLP 212
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 220 PNREALKNLNLLQRLS------IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA 273
P E +L + R S A + +YLH +++ DLKP N+L+D +
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI 180
Query: 274 HVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
V DFG AK + T + E + + + D ++ G+L+ E G P
Sbjct: 181 QVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 220 PNREALKNLNLLQRLS------IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA 273
P E +L + R S A + +YLH +++ DLKP N+L+D +
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI 180
Query: 274 HVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
V DFG AK + T + E + + + D ++ G+L+ E G P
Sbjct: 181 QVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 220 PNREALKNLNLLQRLS------IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA 273
P E +L + R S A + +YLH +++ DLKP N+L+D +
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI 180
Query: 274 HVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
V DFG AK + T + E + + + D ++ G+L+ E G P
Sbjct: 181 QVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 74/179 (41%), Gaps = 27/179 (15%)
Query: 163 SSLRGIENLDLSRN----NFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWL 218
SS RG+ ++ R IRH N++ + F+ L+ E + G L ++L
Sbjct: 66 SSRRGVSREEIEREVNILREIRHPNIITLHDI-----FENKTDVVLILELVSGGELFDFL 120
Query: 219 HPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNV-LLDGEL---TAH 274
+E+L Q L LD +H+ I H DLKP N+ LLD +
Sbjct: 121 -AEKESLTEDEATQFLK------QILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIK 173
Query: 275 VGDFGLAKFLPEATNNFFN------FQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
+ DFG+A + EA N F N F E + D++S G++ +G P
Sbjct: 174 LIDFGIAHKI-EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 64/161 (39%), Gaps = 22/161 (13%)
Query: 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWL--HPNREALKNLNLLQR 233
+ +RH N++++ F L+ EF G L + L H + ++ ++
Sbjct: 68 QSHLRHPNILRMYNY-----FHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE 122
Query: 234 LSIAVDVASALDYLHHYC-ETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF- 291
L+ A+ HYC E ++H D+KP N+L+ + + DFG + P
Sbjct: 123 LADAL----------HYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXM 172
Query: 292 ---FNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTN 329
++ E G D++ G+L E G P +
Sbjct: 173 CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 64/161 (39%), Gaps = 22/161 (13%)
Query: 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWL--HPNREALKNLNLLQR 233
+ +RH N++++ F L+ EF G L + L H + ++ ++
Sbjct: 68 QSHLRHPNILRMYNY-----FHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE 122
Query: 234 LSIAVDVASALDYLHHYC-ETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF- 291
L+ A+ HYC E ++H D+KP N+L+ + + DFG + P
Sbjct: 123 LADAL----------HYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXM 172
Query: 292 ---FNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTN 329
++ E G D++ G+L E G P +
Sbjct: 173 CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + + D++S G ++ E TG+
Sbjct: 191 PEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 220 PNREALKNLNLLQRLS------IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA 273
P E +L + R S A + +YLH +++ DLKP N+L+D +
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI 180
Query: 274 HVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
V DFG AK + T + E + + + D ++ G+L+ E G P
Sbjct: 181 QVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 244 LDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYGMGS 303
L Y+H +VH DLKP N+ ++ + + DFGLA+ A + + +
Sbjct: 139 LKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYVVTRWYRAP 192
Query: 304 EVSTSG-------DVYSFGILLLETFTGK 325
EV S D++S G ++ E TGK
Sbjct: 193 EVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 220 PNREALKNLNLLQRLS------IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA 273
P E +L + R S A + +YLH +++ DLKP N+L+D +
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI 180
Query: 274 HVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
V DFG AK + T + E + + + D ++ G+L+ E G P
Sbjct: 181 QVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 220 PNREALKNLNLLQRLS------IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA 273
P E +L + R S A + +YLH +++ DLKP N+L+D +
Sbjct: 117 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI 173
Query: 274 HVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
V DFG AK + T + E + + + D ++ G+L+ E G P
Sbjct: 174 QVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 234 LSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLA 281
L I + +A A+++LH ++H DLKPSN+ + VGDFGL
Sbjct: 121 LHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLV 165
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 118/283 (41%), Gaps = 43/283 (15%)
Query: 97 IYLDLS---QNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNF 153
++ DL+ Q+ L + + K LG+ E KL+ + + IR+ + F
Sbjct: 117 VFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRI---ISKRKF 173
Query: 154 FRGNIPSSLSSLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGS 213
G+ + +L +++ + + H ++KI + D+ +V E M G
Sbjct: 174 AIGSAREADPALNVETEIEILKK--LNHPCIIKIKNFFDAEDYY------IVLELMEGGE 225
Query: 214 LEEWLHPNR---EALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLL--- 267
L + + N+ EA L Q L A+ YLH E I+H DLKP NVLL
Sbjct: 226 LFDKVVGNKRLKEATCKLYFYQMLL-------AVQYLH---ENGIIHRDLKPENVLLSSQ 275
Query: 268 DGELTAHVGDFGLAKFLPE--------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLL 319
+ + + DFG +K L E T + ++ + + + D +S G++L
Sbjct: 276 EEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 335
Query: 320 ETFTGKRPTNEMFTGNLTLHNFVKEA----LPERLAEIVDPVL 358
+G P +E T ++L + + +PE AE+ + L
Sbjct: 336 ICLSGYPPFSEHRT-QVSLKDQITSGKYNFIPEVWAEVSEKAL 377
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 62/147 (42%), Gaps = 24/147 (16%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLH--HYCET 253
FQ + LV ++ V G L L + L + R I ++ A+D +H HY
Sbjct: 143 FQDENHLYLVMDYYVGGDLLTLLSKFEDKLPED--MARFYIG-EMVLAIDSIHQLHY--- 196
Query: 254 PIVHCDLKPSNVLLDGELTAHVGDFG----------LAKFLPEATNNFFN---FQIAEYG 300
VH D+KP NVLLD + DFG + + T ++ + Q E G
Sbjct: 197 --VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDG 254
Query: 301 MGSEVSTSGDVYSFGILLLETFTGKRP 327
MG + D +S G+ + E G+ P
Sbjct: 255 MG-KYGPECDWWSLGVCMYEMLYGETP 280
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 84/205 (40%), Gaps = 21/205 (10%)
Query: 138 IGSCIRLEQL--VMNGNFFRGNIPSSLSSLRGIENL--DLSRNNFIRHRNLVKIITSCAS 193
+G CI Q V G + P+ +++ +N D R F++ ++
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 73
Query: 194 VDFQGNDSEALVY---EFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHY 250
V G +E V+ E G L +L + +L +L + A +++AL YL
Sbjct: 74 VKLIGVITENPVWIIMELCTLGELRSFLQVRKYSL---DLASLILYAYQLSTALAYLE-- 128
Query: 251 CETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF-------FNFQIAEYGMGS 303
VH D+ NVL+ +GDFGL++++ ++T + E
Sbjct: 129 -SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 187
Query: 304 EVSTSGDVYSFGILLLETFT-GKRP 327
+++ DV+ FG+ + E G +P
Sbjct: 188 RFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 13/91 (14%)
Query: 242 SALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYGM 301
L Y+H I+H DLKP N+ ++ + + DFGLA+ +A + + +
Sbjct: 139 KGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLAR---QADSEMXGXVVTRWYR 192
Query: 302 GSEV-------STSGDVYSFGILLLETFTGK 325
EV + + D++S G ++ E TGK
Sbjct: 193 APEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEY 299
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + F +
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGFVATRW 187
Query: 300 GMGSEV-------STSGDVYSFGILLLETFTGK 325
E+ + + D++S G ++ E TG+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEY 299
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + F +
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGFVATRW 187
Query: 300 GMGSEV-------STSGDVYSFGILLLETFTGK 325
E+ + + D++S G ++ E TG+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 18/109 (16%)
Query: 244 LDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL---PEATNNFFNFQIAEYG 300
L Y+H ++H DLKPSN+L++ +GDFG+A+ L P F +A
Sbjct: 171 LKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 227
Query: 301 MGS--------EVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNF 341
+ E + + D++S G + E + ++F G +H
Sbjct: 228 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR----QLFPGKNYVHQL 272
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 40/99 (40%), Gaps = 15/99 (15%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGEL----TAHVGDFGLAKFLPEATNNFF--- 292
+ ++YLH +VH DLKPSN+L E + DFG AK L A N
Sbjct: 130 IGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL-RAENGLLMTP 185
Query: 293 ----NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
NF E D++S GILL G P
Sbjct: 186 CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 59/148 (39%), Gaps = 36/148 (24%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS------IAVDVASALDYLHH 249
F+ N + +V E++ G E +L + R S A + +YLH
Sbjct: 110 FKDNSNLYMVMEYVAGG----------EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH- 158
Query: 250 YCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL----------PEATNNFFNFQIAEY 299
+++ DLKP N+L+D + V DFG AK + PEA E
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEAL-------APEI 209
Query: 300 GMGSEVSTSGDVYSFGILLLETFTGKRP 327
+ + + D ++ G+L+ E G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 19/131 (14%)
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLL---DGELTAHVGDFGLAKFLPE--------ATNNF 291
A+ YLH E I+H DLKP NVLL + + + DFG +K L E T +
Sbjct: 265 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 321
Query: 292 FNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEA----LP 347
++ + + + D +S G++L +G P +E T ++L + + +P
Sbjct: 322 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT-QVSLKDQITSGKYNFIP 380
Query: 348 ERLAEIVDPVL 358
E AE+ + L
Sbjct: 381 EVWAEVSEKAL 391
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 66/161 (40%), Gaps = 25/161 (15%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNR---------EALKNLNLL 231
H N+V ++ +C + ++ EF G+L +L R + K+ L
Sbjct: 92 HLNVVNLLGACT----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTL 147
Query: 232 QRL-SIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNN 290
+ L + VA +++L +H DL N+LL + + DFGLA+ + + +
Sbjct: 148 EHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 204
Query: 291 F--------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ E + DV+SFG+LL E F+
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 56/138 (40%), Gaps = 12/138 (8%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255
F+ ++ LV E NG + +L + +K + + + + + YLH + I
Sbjct: 80 FEDSNYVYLVLEMCHNGEMNRYL---KNRVKPFSENEARHFMHQIITGMLYLHSH---GI 133
Query: 256 VHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF------NFQIAEYGMGSEVSTSG 309
+H DL SN+LL + + DFGLA L + N+ E S
Sbjct: 134 LHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLES 193
Query: 310 DVYSFGILLLETFTGKRP 327
DV+S G + G+ P
Sbjct: 194 DVWSLGCMFYTLLIGRPP 211
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 62/147 (42%), Gaps = 24/147 (16%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLH--HYCET 253
FQ + LV ++ V G L L + L + R I ++ A+D +H HY
Sbjct: 159 FQDENHLYLVMDYYVGGDLLTLLSKFEDKLPED--MARFYIG-EMVLAIDSIHQLHY--- 212
Query: 254 PIVHCDLKPSNVLLDGELTAHVGDFG----------LAKFLPEATNNFFN---FQIAEYG 300
VH D+KP NVLLD + DFG + + T ++ + Q E G
Sbjct: 213 --VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDG 270
Query: 301 MGSEVSTSGDVYSFGILLLETFTGKRP 327
MG + D +S G+ + E G+ P
Sbjct: 271 MG-KYGPECDWWSLGVCMYEMLYGETP 296
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEY 299
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + F +
Sbjct: 130 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGFVATRW 183
Query: 300 GMGSEV-------STSGDVYSFGILLLETFTGK 325
E+ + + D++S G ++ E TG+
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 28/131 (21%)
Query: 250 YCE-TPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN------FQIAEYGMG 302
YC ++H DLKP N+L++ + DFGLA+ T + N ++ + +G
Sbjct: 115 YCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLG 174
Query: 303 S-EVSTSGDVYSFGILLLETFTGK--------------------RPTNEMFTGNLTLHNF 341
S + ST D++ G + E TG+ PT E + G L+ F
Sbjct: 175 STDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEF 234
Query: 342 VKEALPERLAE 352
P+ AE
Sbjct: 235 KTYNYPKYRAE 245
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 16/133 (12%)
Query: 204 LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPS 263
LV E + G L E + + K+ + + I + SA+ ++H + +VH DLKP
Sbjct: 83 LVMELLNGGELFERI----KKKKHFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPE 135
Query: 264 NVLLDGE---LTAHVGDFGLAKFLPEATNNF------FNFQIAEYGMGSEVSTSGDVYSF 314
N+L E L + DFG A+ P ++ E + S D++S
Sbjct: 136 NLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSL 195
Query: 315 GILLLETFTGKRP 327
G++L +G+ P
Sbjct: 196 GVILYTMLSGQVP 208
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 84/205 (40%), Gaps = 21/205 (10%)
Query: 138 IGSCIRLEQL--VMNGNFFRGNIPSSLSSLRGIENL--DLSRNNFIRHRNLVKIITSCAS 193
+G CI Q V G + P+ +++ +N D R F++ ++
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 73
Query: 194 VDFQGNDSEALVY---EFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHY 250
V G +E V+ E G L +L + +L +L + A +++AL YL
Sbjct: 74 VKLIGVITENPVWIIMELCTLGELRSFLQVRKFSL---DLASLILYAYQLSTALAYLE-- 128
Query: 251 CETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF-------FNFQIAEYGMGS 303
VH D+ NVL+ +GDFGL++++ ++T + E
Sbjct: 129 -SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFR 187
Query: 304 EVSTSGDVYSFGILLLETFT-GKRP 327
+++ DV+ FG+ + E G +P
Sbjct: 188 RFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 84/205 (40%), Gaps = 21/205 (10%)
Query: 138 IGSCIRLEQL--VMNGNFFRGNIPSSLSSLRGIENL--DLSRNNFIRHRNLVKIITSCAS 193
+G CI Q V G + P+ +++ +N D R F++ ++
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 73
Query: 194 VDFQGNDSEALVY---EFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHY 250
V G +E V+ E G L +L + +L +L + A +++AL YL
Sbjct: 74 VKLIGVITENPVWIIMELCTLGELRSFLQVRKFSL---DLASLILYAYQLSTALAYLE-- 128
Query: 251 CETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF-------FNFQIAEYGMGS 303
VH D+ NVL+ +GDFGL++++ ++T + E
Sbjct: 129 -SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 187
Query: 304 EVSTSGDVYSFGILLLETFT-GKRP 327
+++ DV+ FG+ + E G +P
Sbjct: 188 RFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 17/122 (13%)
Query: 178 FIRHRNLVKIITSCASVDFQGNDSEA---LVYEFMVNGSLEEWLHPNREALKNLNLLQRL 234
+RH N++ I S D S L+ + GSL ++L L L+ + L
Sbjct: 87 MLRHENILGFIAS----DMTSRHSSTQLWLITHYHEMGSLYDYLQ-----LTTLDTVSCL 137
Query: 235 SIAVDVASALDYLH-----HYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATN 289
I + +AS L +LH + I H DLK N+L+ + D GLA ++TN
Sbjct: 138 RIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTN 197
Query: 290 NF 291
Sbjct: 198 QL 199
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 66/162 (40%), Gaps = 26/162 (16%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNR----------EALKNLNL 230
H N+V ++ +C + ++ EF G+L +L R + K+
Sbjct: 91 HLNVVNLLGACT----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLT 146
Query: 231 LQRL-SIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATN 289
L+ L + VA +++L +H DL N+LL + + DFGLA+ + + +
Sbjct: 147 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD 203
Query: 290 NF--------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ E + DV+SFG+LL E F+
Sbjct: 204 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 252 ETPIVHCDLKPSNVLL--DGELTAHVGDFG----LAKFLPEATNNFFNFQIAEYGMGSEV 305
E I+HCDLKP N+LL + DFG L + + + + F ++ E +G
Sbjct: 177 ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRF-YRSPEVLLGMPY 235
Query: 306 STSGDVYSFGILLLETFTGK 325
+ D++S G +L+E TG+
Sbjct: 236 DLAIDMWSLGCILVEMHTGE 255
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 84/205 (40%), Gaps = 21/205 (10%)
Query: 138 IGSCIRLEQL--VMNGNFFRGNIPSSLSSLRGIENL--DLSRNNFIRHRNLVKIITSCAS 193
+G CI Q V G + P+ +++ +N D R F++ ++
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 73
Query: 194 VDFQGNDSEALVY---EFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHY 250
V G +E V+ E G L +L + +L +L + A +++AL YL
Sbjct: 74 VKLIGVITENPVWIIMELCTLGELRSFLQVRKYSL---DLASLILYAYQLSTALAYLE-- 128
Query: 251 CETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF-------FNFQIAEYGMGS 303
VH D+ NVL+ +GDFGL++++ ++T + E
Sbjct: 129 -SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 187
Query: 304 EVSTSGDVYSFGILLLETFT-GKRP 327
+++ DV+ FG+ + E G +P
Sbjct: 188 RFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 84/205 (40%), Gaps = 21/205 (10%)
Query: 138 IGSCIRLEQL--VMNGNFFRGNIPSSLSSLRGIENL--DLSRNNFIRHRNLVKIITSCAS 193
+G CI Q V G + P+ +++ +N D R F++ ++
Sbjct: 17 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 76
Query: 194 VDFQGNDSEALVY---EFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHY 250
V G +E V+ E G L +L + +L +L + A +++AL YL
Sbjct: 77 VKLIGVITENPVWIIMELCTLGELRSFLQVRKYSL---DLASLILYAYQLSTALAYLE-- 131
Query: 251 CETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF-------FNFQIAEYGMGS 303
VH D+ NVL+ +GDFGL++++ ++T + E
Sbjct: 132 -SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 190
Query: 304 EVSTSGDVYSFGILLLETFT-GKRP 327
+++ DV+ FG+ + E G +P
Sbjct: 191 RFTSASDVWMFGVCMWEILMHGVKP 215
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 84/205 (40%), Gaps = 21/205 (10%)
Query: 138 IGSCIRLEQL--VMNGNFFRGNIPSSLSSLRGIENL--DLSRNNFIRHRNLVKIITSCAS 193
+G CI Q V G + P+ +++ +N D R F++ ++
Sbjct: 16 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 75
Query: 194 VDFQGNDSEALVY---EFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHY 250
V G +E V+ E G L +L + +L +L + A +++AL YL
Sbjct: 76 VKLIGVITENPVWIIMELCTLGELRSFLQVRKYSL---DLASLILYAYQLSTALAYLE-- 130
Query: 251 CETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF-------FNFQIAEYGMGS 303
VH D+ NVL+ +GDFGL++++ ++T + E
Sbjct: 131 -SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 189
Query: 304 EVSTSGDVYSFGILLLETFT-GKRP 327
+++ DV+ FG+ + E G +P
Sbjct: 190 RFTSASDVWMFGVCMWEILMHGVKP 214
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 84/205 (40%), Gaps = 21/205 (10%)
Query: 138 IGSCIRLEQL--VMNGNFFRGNIPSSLSSLRGIENL--DLSRNNFIRHRNLVKIITSCAS 193
+G CI Q V G + P+ +++ +N D R F++ ++
Sbjct: 42 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 101
Query: 194 VDFQGNDSEALVY---EFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHY 250
V G +E V+ E G L +L + +L +L + A +++AL YL
Sbjct: 102 VKLIGVITENPVWIIMELCTLGELRSFLQVRKYSL---DLASLILYAYQLSTALAYLE-- 156
Query: 251 CETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF-------FNFQIAEYGMGS 303
VH D+ NVL+ +GDFGL++++ ++T + E
Sbjct: 157 -SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 215
Query: 304 EVSTSGDVYSFGILLLETFT-GKRP 327
+++ DV+ FG+ + E G +P
Sbjct: 216 RFTSASDVWMFGVCMWEILMHGVKP 240
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 252 ETPIVHCDLKPSNVLL--DGELTAHVGDFG----LAKFLPEATNNFFNFQIAEYGMGSEV 305
E I+HCDLKP N+LL + DFG L + + + + F ++ E +G
Sbjct: 158 ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRF-YRSPEVLLGMPY 216
Query: 306 STSGDVYSFGILLLETFTGK 325
+ D++S G +L+E TG+
Sbjct: 217 DLAIDMWSLGCILVEMHTGE 236
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 13/138 (9%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255
FQ D V E++ G L + + + + A ++A L +L I
Sbjct: 411 FQTMDRLYFVMEYVNGGDLMYHI----QQVGRFKEPHAVFYAAEIAIGLFFLQ---SKGI 463
Query: 256 VHCDLKPSNVLLDGELTAHVGDFGLAK--FLPEATNNFF----NFQIAEYGMGSEVSTSG 309
++ DLK NV+LD E + DFG+ K T F ++ E S
Sbjct: 464 IYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSV 523
Query: 310 DVYSFGILLLETFTGKRP 327
D ++FG+LL E G+ P
Sbjct: 524 DWWAFGVLLYEMLAGQAP 541
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 13/138 (9%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255
FQ D V E++ G L + + + + A ++A L +L I
Sbjct: 90 FQTMDRLYFVMEYVNGGDLMYHI----QQVGRFKEPHAVFYAAEIAIGLFFLQ---SKGI 142
Query: 256 VHCDLKPSNVLLDGELTAHVGDFGLAK--FLPEATNNFF----NFQIAEYGMGSEVSTSG 309
++ DLK NV+LD E + DFG+ K T F ++ E S
Sbjct: 143 IYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSV 202
Query: 310 DVYSFGILLLETFTGKRP 327
D ++FG+LL E G+ P
Sbjct: 203 DWWAFGVLLYEMLAGQAP 220
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 220 PNREALKNLNLLQRLS------IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA 273
P E +L + R S A + +YLH +++ DLKP N+++D +
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYI 180
Query: 274 HVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
V DFG AK + T + E + + + D ++ G+L+ E G P
Sbjct: 181 QVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 40/99 (40%), Gaps = 15/99 (15%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGEL----TAHVGDFGLAKFLPEATNNFF--- 292
+ ++YLH +VH DLKPSN+L E + DFG AK L A N
Sbjct: 130 IGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL-RAENGLLMTP 185
Query: 293 ----NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
NF E D++S GILL G P
Sbjct: 186 CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEY 299
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + +
Sbjct: 141 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTGYVATRW 194
Query: 300 GMGSEV-------STSGDVYSFGILLLETFTGK 325
E+ + + D++S G ++ E TG+
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 84/205 (40%), Gaps = 21/205 (10%)
Query: 138 IGSCIRLEQL--VMNGNFFRGNIPSSLSSLRGIENL--DLSRNNFIRHRNLVKIITSCAS 193
+G CI Q V G + P+ +++ +N D R F++ ++
Sbjct: 19 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 78
Query: 194 VDFQGNDSEALVY---EFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHY 250
V G +E V+ E G L +L + +L +L + A +++AL YL
Sbjct: 79 VKLIGVITENPVWIIMELCTLGELRSFLQVRKYSL---DLASLILYAYQLSTALAYLE-- 133
Query: 251 CETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF-------FNFQIAEYGMGS 303
VH D+ NVL+ +GDFGL++++ ++T + E
Sbjct: 134 -SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 192
Query: 304 EVSTSGDVYSFGILLLETFT-GKRP 327
+++ DV+ FG+ + E G +P
Sbjct: 193 RFTSASDVWMFGVCMWEILMHGVKP 217
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 84/205 (40%), Gaps = 21/205 (10%)
Query: 138 IGSCIRLEQL--VMNGNFFRGNIPSSLSSLRGIENL--DLSRNNFIRHRNLVKIITSCAS 193
+G CI Q V G + P+ +++ +N D R F++ ++
Sbjct: 11 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 70
Query: 194 VDFQGNDSEALVY---EFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHY 250
V G +E V+ E G L +L + +L +L + A +++AL YL
Sbjct: 71 VKLIGVITENPVWIIMELCTLGELRSFLQVRKYSL---DLASLILYAYQLSTALAYLE-- 125
Query: 251 CETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF-------FNFQIAEYGMGS 303
VH D+ NVL+ +GDFGL++++ ++T + E
Sbjct: 126 -SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 184
Query: 304 EVSTSGDVYSFGILLLETFT-GKRP 327
+++ DV+ FG+ + E G +P
Sbjct: 185 RFTSASDVWMFGVCMWEILMHGVKP 209
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 66/163 (40%), Gaps = 27/163 (16%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNR-----------EALKNLN 229
H N+V ++ +C + ++ EF G+L +L R + K+
Sbjct: 81 HLNVVNLLGACT----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 230 LLQRL-SIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT 288
L+ L + VA +++L +H DL N+LL + + DFGLA+ + +
Sbjct: 137 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDP 193
Query: 289 NNF--------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + E + DV+SFG+LL E F+
Sbjct: 194 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 22/141 (15%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS------IAVDVASALDYLHH 249
F+ N + +V E++ G E +L + R S A + +YLH
Sbjct: 110 FKDNSNLYMVMEYVAGG----------EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH- 158
Query: 250 YCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVS 306
+++ DLKP N+++D + V DFG AK + T + E + +
Sbjct: 159 --SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIISKGYN 216
Query: 307 TSGDVYSFGILLLETFTGKRP 327
+ D ++ G+L+ E G P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPP 237
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 22/141 (15%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS------IAVDVASALDYLHH 249
F+ N + +V E++ G E +L + R + A + +YLH
Sbjct: 110 FKDNSNLYMVMEYVAGG----------EMFSHLRRIGRFAEPHARFYAAQIVLTFEYLH- 158
Query: 250 YCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVS 306
+++ DLKP N+L+D + V DFG AK + T + E + +
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 307 TSGDVYSFGILLLETFTGKRP 327
+ D ++ G+L+ E G P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPP 237
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 26/208 (12%)
Query: 151 GNFFRGNIPSSLSSLRGIENLDLSRNNF-----IRHRNLVKIITSCASVDFQGNDSEALV 205
G+ F + +++S LR + D+ F + H+N+VK+ A + + L+
Sbjct: 34 GDLFAIKVFNNISFLRPV---DVQMREFEVLKKLNHKNIVKLF---AIEEETTTRHKVLI 87
Query: 206 YEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNV 265
EF GSL L A L + L + DV +++L E IVH ++KP N+
Sbjct: 88 MEFCPCGSLYTVLEEPSNAY-GLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNI 143
Query: 266 LL----DGELTAHVGDFGLAKFLPEATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLET 321
+ DG+ + DFG A+ L E F + G+E D+Y +L +
Sbjct: 144 MRVIGEDGQSVYKLTDFGAAREL-EDDEQFVSL------YGTEEYLHPDMYERAVLRKDH 196
Query: 322 FTGKRPTNEMFTGNLTLHNFVKEALPER 349
T ++++ +T ++ +LP R
Sbjct: 197 QKKYGATVDLWSIGVTFYHAATGSLPFR 224
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEY 299
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + +
Sbjct: 141 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTGYVATRW 194
Query: 300 GMGSEV-------STSGDVYSFGILLLETFTGK 325
E+ + + D++S G ++ E TG+
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEY 299
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + +
Sbjct: 141 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTGYVATRW 194
Query: 300 GMGSEV-------STSGDVYSFGILLLETFTGK 325
E+ + + D++S G ++ E TG+
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 181 HRNLVKIITSCASVDFQGND---SEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIA 237
H N+V+ S AS+ + +D +E L+ + G L E+L E+ L+ L I
Sbjct: 85 HPNIVQF-CSAASIGKEESDTGQAEFLLLTELCKGQLVEFLK-KMESRGPLSCDTVLKIF 142
Query: 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLA 281
A+ ++H + PI+H DLK N+LL + T + DFG A
Sbjct: 143 YQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 66/163 (40%), Gaps = 27/163 (16%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNR-----------EALKNLN 229
H N+V ++ +C + ++ EF G+L +L R + K+
Sbjct: 90 HLNVVNLLGACT----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145
Query: 230 LLQRL-SIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT 288
L+ L + VA +++L +H DL N+LL + + DFGLA+ + +
Sbjct: 146 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDP 202
Query: 289 NNF--------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + E + DV+SFG+LL E F+
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 66/167 (39%), Gaps = 33/167 (19%)
Query: 178 FIRHRNLVKIITSCASVDFQGNDSEA---LVYEFMVNGSLEEWLHPNREALKNLNLLQRL 234
+RH N++ I S D S L+ + GSL ++L L L+ + L
Sbjct: 58 MLRHENILGFIAS----DMTSRHSSTQLWLITHYHEMGSLYDYLQ-----LTTLDTVSCL 108
Query: 235 SIAVDVASALDYLH-----HYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATN 289
I + +AS L +LH + I H DLK N+L+ + D GLA ++TN
Sbjct: 109 RIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTN 168
Query: 290 NFFNFQIAEYG----MGSEV------------STSGDVYSFGILLLE 320
G M EV D+++FG++L E
Sbjct: 169 QLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWE 215
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 67/155 (43%), Gaps = 23/155 (14%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
++H NLV ++ F+ LV+E+ + L E R ++L SI
Sbjct: 59 LKHPNLVNLLEV-----FRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVK----SITW 109
Query: 239 DVASALDYLH-HYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIA 297
A+++ H H C +H D+KP N+L+ + DFG A+ L +++++ ++A
Sbjct: 110 QTLQAVNFCHKHNC----IHRDVKPENILITKHSVIKLCDFGFARLL-TGPSDYYDDEVA 164
Query: 298 EYGMGS--------EVSTSGDVYSFGILLLETFTG 324
S + DV++ G + E +G
Sbjct: 165 TRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 12/112 (10%)
Query: 226 KNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDG---ELTAHVGDFGLAK 282
K + + I V S + Y+H + IVH DLKP N+LL+ + + DFGL+
Sbjct: 127 KRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLST 183
Query: 283 FLPEATNNFFNFQIAEYGMGSEV-----STSGDVYSFGILLLETFTGKRPTN 329
EA+ + Y + EV DV+S G++L +G P N
Sbjct: 184 HF-EASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFN 234
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 22/141 (15%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS------IAVDVASALDYLHH 249
F+ N + +V E++ G E +L + R S A + +YLH
Sbjct: 110 FKDNSNLYMVMEYVAGG----------EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH- 158
Query: 250 YCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVS 306
+++ DLKP N+L+D + V DFG AK + T + E + +
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 307 TSGDVYSFGILLLETFTGKRP 327
+ D ++ G+L+ + G P
Sbjct: 217 KAVDWWALGVLIYQMAAGYPP 237
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 47/116 (40%), Gaps = 31/116 (26%)
Query: 237 AVDVASALDYLHHYCETPIVHCDLKPSNVLLDGEL---------------------TAHV 275
+++ AL+YL + + H DLKP N+LLD T
Sbjct: 143 CIEILKALNYLR---KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKST 199
Query: 276 G----DFGLAKFLPEATNNFFN---FQIAEYGMGSEVSTSGDVYSFGILLLETFTG 324
G DFG A F + + N ++ E + S D++SFG +L E +TG
Sbjct: 200 GIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTG 255
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 66/163 (40%), Gaps = 27/163 (16%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNR-----------EALKNLN 229
H N+V ++ +C + ++ EF G+L +L R + K+
Sbjct: 81 HLNVVNLLGACT----KPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 230 LLQRL-SIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT 288
L+ L + VA +++L +H DL N+LL + + DFGLA+ + +
Sbjct: 137 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDP 193
Query: 289 NNF--------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + E + DV+SFG+LL E F+
Sbjct: 194 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 139 ILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRA 195
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 17/122 (13%)
Query: 178 FIRHRNLVKIITSCASVDFQGNDSEA---LVYEFMVNGSLEEWLHPNREALKNLNLLQRL 234
+RH N++ I S D S L+ + GSL ++L L L+ + L
Sbjct: 58 MLRHENILGFIAS----DMTSRHSSTQLWLITHYHEMGSLYDYLQ-----LTTLDTVSCL 108
Query: 235 SIAVDVASALDYLH-----HYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATN 289
I + +AS L +LH + I H DLK N+L+ + D GLA ++TN
Sbjct: 109 RIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTN 168
Query: 290 NF 291
Sbjct: 169 QL 170
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 146 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 202
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----------FLPEATN 289
+ L Y+H ++H DLKPSN+LL+ + DFGLA+ FL E
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVA 189
Query: 290 NFFNFQIAEYGMGSE-VSTSGDVYSFGILLLETFTGK 325
+ ++ E + S+ + S D++S G +L E + +
Sbjct: 190 TRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 146 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 202
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 139 ILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRA 195
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 146 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 202
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 220 PNREALKNLNLLQRLS------IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA 273
P E +L + R S A + +YLH +++ DLKP N+++D +
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYI 181
Query: 274 HVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
V DFG AK + T + E + + + D ++ G+L+ E G P
Sbjct: 182 KVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEY 299
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + +
Sbjct: 157 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMXGYVATRW 210
Query: 300 GMGSEV-------STSGDVYSFGILLLETFTGK 325
E+ + + D++S G ++ E TG+
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 145 ILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRA 201
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----------FLPEATN 289
+ L Y+H ++H DLKPSN+LL+ + DFGLA+ FL E
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 193
Query: 290 NFFNFQIAEYGMGSE-VSTSGDVYSFGILLLETFTGK 325
+ ++ E + S+ + S D++S G +L E + +
Sbjct: 194 TRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 220 PNREALKNLNLLQRLS------IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA 273
P E +L + R S A + +YLH +++ DLKP N+++D +
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYI 181
Query: 274 HVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
V DFG AK + T + E + + + D ++ G+L+ E G P
Sbjct: 182 KVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----------FLPEATN 289
+ L Y+H ++H DLKPSN+LL+ + DFGLA+ FL E
Sbjct: 138 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 194
Query: 290 NFFNFQIAEYGMGSE-VSTSGDVYSFGILLLETFTGK 325
+ ++ E + S+ + S D++S G +L E + +
Sbjct: 195 TRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 139 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 195
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 220 PNREALKNLNLLQRLS------IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA 273
P E +L + R S A + +YLH +++ DLKP N+++D +
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYI 181
Query: 274 HVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
V DFG AK + T + E + + + D ++ G+L+ E G P
Sbjct: 182 KVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 220 PNREALKNLNLLQRLS------IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA 273
P E +L + R S A + +YLH +++ DLKP N+++D +
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYI 180
Query: 274 HVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
V DFG AK + T + E + + + D ++ G+L+ E G P
Sbjct: 181 KVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 145 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 201
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 139 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 195
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----------FLPEATN 289
+ L Y+H ++H DLKPSN+LL+ + DFGLA+ FL E
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 290 NFFNFQIAEYGMGSE-VSTSGDVYSFGILLLETFTGK 325
+ ++ E + S+ + S D++S G +L E + +
Sbjct: 190 TRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 133 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 189
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 190 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 157 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 213
Query: 297 AEYGMG-SEVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----------FLPEATN 289
+ L Y+H ++H DLKPSN+LL+ + DFGLA+ FL E
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 290 NFFNFQIAEYGMGSE-VSTSGDVYSFGILLLETFTGK 325
+ ++ E + S+ + S D++S G +L E + +
Sbjct: 194 TRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 154 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 210
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 141 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 197
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----------FLPEATN 289
+ L Y+H ++H DLKPSN+LL+ + DFGLA+ FL E
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 290 NFFNFQIAEYGMGSE-VSTSGDVYSFGILLLETFTGK 325
+ ++ E + S+ + S D++S G +L E + +
Sbjct: 190 TRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 153 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 209
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----------FLPEATN 289
+ L Y+H ++H DLKPSN+LL+ + DFGLA+ FL E
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 290 NFFNFQIAEYGMGSE-VSTSGDVYSFGILLLETFTGK 325
+ ++ E + S+ + S D++S G +L E + +
Sbjct: 194 TRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----------FLPEATN 289
+ L Y+H ++H DLKPSN+LL+ + DFGLA+ FL E
Sbjct: 131 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 290 NFFNFQIAEYGMGSE-VSTSGDVYSFGILLLETFTGK 325
+ ++ E + S+ + S D++S G +L E + +
Sbjct: 188 TRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 136 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 192
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 14/100 (14%)
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYGMG 302
AL++LH I+H DLK NVL+ E + DFG++ + +F Y M
Sbjct: 129 ALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMA 185
Query: 303 SEV-----------STSGDVYSFGILLLETFTGKRPTNEM 331
EV D++S GI L+E + P +E+
Sbjct: 186 PEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL 225
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 140 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 196
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 144 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 200
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 201 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 136 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 192
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%), Gaps = 30/202 (14%)
Query: 138 IGSCIRLEQL--VMNGNFFRGNIPSSLSSLRGIENL--DLSRNNFIRHRNLVKIITSCAS 193
+G CI Q V G + P+ +++ +N D R F++ ++
Sbjct: 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 453
Query: 194 VDFQGNDSEALVY---EFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHY 250
V G +E V+ E G L +L + +L +L + A +++AL YL
Sbjct: 454 VKLIGVITENPVWIIMELCTLGELRSFLQVRKFSL---DLASLILYAYQLSTALAYLE-- 508
Query: 251 CETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYG------MGSE 304
VH D+ NVL+ +GDFGL++++ ++T + A G M E
Sbjct: 509 -SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDST-----YYKASKGKLPIKWMAPE 562
Query: 305 ------VSTSGDVYSFGILLLE 320
+++ DV+ FG+ + E
Sbjct: 563 SINFRRFTSASDVWMFGVCMWE 584
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----------FLPEATN 289
+ L Y+H ++H DLKPSN+LL+ + DFGLA+ FL E
Sbjct: 131 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 290 NFFNFQIAEYGMGSE-VSTSGDVYSFGILLLETFTGK 325
+ ++ E + S+ + S D++S G +L E + +
Sbjct: 188 TRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 153 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 209
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 131 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 187
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----------FLPEATN 289
+ L Y+H ++H DLKPSN+LL+ + DFGLA+ FL E
Sbjct: 138 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 194
Query: 290 NFFNFQIAEYGMGSE-VSTSGDVYSFGILLLETFTGK 325
+ ++ E + S+ + S D++S G +L E + +
Sbjct: 195 TRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 130 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 186
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----------FLPEATN 289
+ L Y+H ++H DLKPSN+LL+ + DFGLA+ FL E
Sbjct: 139 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 195
Query: 290 NFFNFQIAEYGMGSE-VSTSGDVYSFGILLLETFTGK 325
+ ++ E + S+ + S D++S G +L E + +
Sbjct: 196 TRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----------FLPEATN 289
+ L Y+H ++H DLKPSN+LL+ + DFGLA+ FL E
Sbjct: 130 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 186
Query: 290 NFFNFQIAEYGMGSE-VSTSGDVYSFGILLLETFTGK 325
+ ++ E + S+ + S D++S G +L E + +
Sbjct: 187 TRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----------FLPEATN 289
+ L Y+H ++H DLKPSN+LL+ + DFGLA+ FL E
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 290 NFFNFQIAEYGMGSE-VSTSGDVYSFGILLLETFTGK 325
+ ++ E + S+ + S D++S G +L E + +
Sbjct: 194 TRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 131 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 187
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----------FLPEATN 289
+ L Y+H ++H DLKPSN+LL+ + DFGLA+ FL E
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 290 NFFNFQIAEYGMGSE-VSTSGDVYSFGILLLETFTGK 325
+ ++ E + S+ + S D++S G +L E + +
Sbjct: 194 TRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 132 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 188
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 66/163 (40%), Gaps = 27/163 (16%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNR-----------EALKNLN 229
H N+V ++ +C + ++ EF G+L +L R + K+
Sbjct: 127 HLNVVNLLGACT----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 182
Query: 230 LLQRL-SIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT 288
L+ L + VA +++L +H DL N+LL + + DFGLA+ + +
Sbjct: 183 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 239
Query: 289 NNF--------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + E + DV+SFG+LL E F+
Sbjct: 240 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 22/146 (15%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLH--HYCET 253
FQ +++ LV ++ V G L L + L + R +A ++ A+D +H HY
Sbjct: 143 FQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEE--MARFYLA-EMVIAIDSVHQLHY--- 196
Query: 254 PIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPE----------ATNNFFNFQI--AEYGM 301
VH D+KP N+L+D + DFG L E T ++ + +I A G
Sbjct: 197 --VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGG 254
Query: 302 GSEVSTSGDVYSFGILLLETFTGKRP 327
D +S G+ + E G+ P
Sbjct: 255 KGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 154 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 210
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 140 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 196
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----------FLPEATN 289
+ L Y+H ++H DLKPSN+LL+ + DFGLA+ FL E
Sbjct: 153 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 290 NFFNFQIAEYGMGSE-VSTSGDVYSFGILLLETFTGK 325
+ ++ E + S+ + S D++S G +L E + +
Sbjct: 210 TRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 237 AVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF---N 293
A + +YLH +++ DLKP N+L+D + V DFG AK + T
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 203
Query: 294 FQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
+ E + + + D ++ G+L+ E G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----------FLPEATN 289
+ L Y+H ++H DLKPSN+LL+ + DFGLA+ FL E
Sbjct: 135 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 290 NFFNFQIAEYGMGSE-VSTSGDVYSFGILLLETFTGK 325
+ ++ E + S+ + S D++S G +L E + +
Sbjct: 192 TRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 11/98 (11%)
Query: 234 LSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL---PEA--- 287
+S + VA +++L +H DL N+LL + DFGLA+ + P+
Sbjct: 202 ISYSFQVARGMEFLSS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRK 258
Query: 288 --TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
T + E ST DV+S+G+LL E F+
Sbjct: 259 GDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----------FLPEATN 289
+ L Y+H ++H DLKPSN+LL+ + DFGLA+ FL E
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 290 NFFNFQIAEYGMGSE-VSTSGDVYSFGILLLETFTGK 325
+ ++ E + S+ + S D++S G +L E + +
Sbjct: 190 TRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 136 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 192
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 14/100 (14%)
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYGMG 302
AL++LH I+H DLK NVL+ E + DFG++ + +F Y M
Sbjct: 121 ALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMA 177
Query: 303 SEV-----------STSGDVYSFGILLLETFTGKRPTNEM 331
EV D++S GI L+E + P +E+
Sbjct: 178 PEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL 217
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 130 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 186
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----------FLPEATN 289
+ L Y+H ++H DLKPSN+LL+ + DFGLA+ FL E
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 290 NFFNFQIAEYGMGSE-VSTSGDVYSFGILLLETFTGK 325
+ ++ E + S+ + S D++S G +L E + +
Sbjct: 194 TRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 26/208 (12%)
Query: 151 GNFFRGNIPSSLSSLRGIENLDLSRNNF-----IRHRNLVKIITSCASVDFQGNDSEALV 205
G+ F + +++S LR + D+ F + H+N+VK+ A + + L+
Sbjct: 34 GDLFAIKVFNNISFLRPV---DVQMREFEVLKKLNHKNIVKLF---AIEEETTTRHKVLI 87
Query: 206 YEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNV 265
EF GSL L A L + L + DV +++L E IVH ++KP N+
Sbjct: 88 MEFCPCGSLYTVLEEPSNAY-GLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNI 143
Query: 266 LL----DGELTAHVGDFGLAKFLPEATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLET 321
+ DG+ + DFG A+ L E F G+E D+Y +L +
Sbjct: 144 MRVIGEDGQSVYKLTDFGAAREL-EDDEQFVXL------YGTEEYLHPDMYERAVLRKDH 196
Query: 322 FTGKRPTNEMFTGNLTLHNFVKEALPER 349
T ++++ +T ++ +LP R
Sbjct: 197 QKKYGATVDLWSIGVTFYHAATGSLPFR 224
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 237 AVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF---N 293
A + +YLH +++ DLKP N+L+D + V DFG AK + T
Sbjct: 142 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 198
Query: 294 FQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
+ E + + + D ++ G+L+ E G P
Sbjct: 199 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----------FLPEATN 289
+ L Y+H ++H DLKPSN+LL+ + DFGLA+ FL E
Sbjct: 141 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 197
Query: 290 NFFNFQIAEYGMGSE-VSTSGDVYSFGILLLETFTGK 325
+ ++ E + S+ + S D++S G +L E + +
Sbjct: 198 TRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----------FLPEATN 289
+ L Y+H ++H DLKPSN+LL+ + DFGLA+ FL E
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 290 NFFNFQIAEYGMGSE-VSTSGDVYSFGILLLETFTGK 325
+ ++ E + S+ + S D++S G +L E + +
Sbjct: 190 TRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 237 AVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF---N 293
A + +YLH +++ DLKP N+L+D + V DFG AK + T
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 203
Query: 294 FQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
+ E + + + D ++ G+L+ E G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 237 AVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF---N 293
A + +YLH +++ DLKP N+L+D + V DFG AK + T
Sbjct: 140 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 196
Query: 294 FQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
+ E + + + D ++ G+L+ E G P
Sbjct: 197 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 237 AVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF---N 293
A + +YLH +++ DLKP N+L+D + V DFG AK + T
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 204
Query: 294 FQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
+ E + + + D ++ G+L+ E G P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 140 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 196
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 57/141 (40%), Gaps = 22/141 (15%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS------IAVDVASALDYLHH 249
F+ N + +V E++ G E +L + R A + +YLH
Sbjct: 131 FKDNSNLYMVMEYVAGG----------EMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH- 179
Query: 250 YCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVS 306
+++ DLKP N+L+D + V DFG AK + T + E + +
Sbjct: 180 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYN 237
Query: 307 TSGDVYSFGILLLETFTGKRP 327
+ D ++ G+L+ E G P
Sbjct: 238 KAVDWWALGVLIYEMAAGYPP 258
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 9/88 (10%)
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAE 298
D AL +LH +VH D+KP+N+ L +GDFGL L A
Sbjct: 165 DTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPR 221
Query: 299 YGMGSEV-----STSGDVYSFGILLLET 321
Y M E+ T+ DV+S G+ +LE
Sbjct: 222 Y-MAPELLQGSYGTAADVFSLGLTILEV 248
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 34/210 (16%)
Query: 106 LNGPLPSNFGILKNLGAIDISENKLSGQIP----SSIGSCIRLEQLVMNGNF-------F 154
L+ P S LK+L D++ + +P +I I L++ + G F +
Sbjct: 5 LDRPFISEGTTLKDL-IYDMTTSGSGSGLPLLVQRTIARTIVLQESIGKGRFGEVWRGKW 63
Query: 155 RG-----NIPSSLSSLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEA---LVY 206
RG I SS ++ + +RH N++ I + D + N + LV
Sbjct: 64 RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFI----AADNKDNGTWTQLWLVS 119
Query: 207 EFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYC-----ETPIVHCDLK 261
++ +GSL ++L NR + +++ +A+ AS L +LH + I H DLK
Sbjct: 120 DYHEHGSLFDYL--NRYTVTVEGMIK---LALSTASGLAHLHMEIVGTQGKPAIAHRDLK 174
Query: 262 PSNVLLDGELTAHVGDFGLAKFLPEATNNF 291
N+L+ T + D GLA AT+
Sbjct: 175 SKNILVKKNGTCCIADLGLAVRHDSATDTI 204
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----------FLPEATN 289
+ L Y+H ++H DLKPSN+LL+ + DFGLA+ FL E
Sbjct: 153 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 290 NFFNFQIAEYGMGSE-VSTSGDVYSFGILLLETFTGK 325
+ ++ E + S+ + S D++S G +L E + +
Sbjct: 210 TRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----------FLPEATN 289
+ L Y+H ++H DLKPSN+LL+ + DFGLA+ FL E
Sbjct: 135 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 290 NFFNFQIAEYGMGSE-VSTSGDVYSFGILLLETFTGK 325
+ ++ E + S+ + S D++S G +L E + +
Sbjct: 192 TRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 237 AVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF---N 293
A + +YLH +++ DLKP N+L+D + V DFG AK + T
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 203
Query: 294 FQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
+ E + + + D ++ G+L+ E G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 66/163 (40%), Gaps = 27/163 (16%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNR-----------EALKNLN 229
H N+V ++ +C + ++ EF G+L +L R + K+
Sbjct: 90 HLNVVNLLGACT----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145
Query: 230 LLQRL-SIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT 288
L+ L + VA +++L +H DL N+LL + + DFGLA+ + +
Sbjct: 146 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 202
Query: 289 NNF--------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + E + DV+SFG+LL E F+
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 237 AVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF---N 293
A + +YLH +++ DLKP N+L+D + V DFG AK + T
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 203
Query: 294 FQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
+ E + + + D ++ G+L+ E G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFN 293
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + AT +
Sbjct: 163 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 219
Query: 294 FQIAEYGMGSEVSTSGDVYSFGILLLETFTGK 325
+I M ++ D++S G ++ E TG+
Sbjct: 220 PEIMLNWMHYNMTV--DIWSVGCIMAELLTGR 249
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFN 293
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + AT +
Sbjct: 154 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATRWYRA 210
Query: 294 FQIAEYGMGSEVSTSGDVYSFGILLLETFTGK 325
+I M + + D++S G ++ E TG+
Sbjct: 211 PEIMLNWM--HYNQTVDIWSVGCIMAELLTGR 240
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFN 293
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + AT +
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATRWYRA 190
Query: 294 FQIAEYGMGSEVSTSGDVYSFGILLLETFTGK 325
+I M + + D++S G ++ E TG+
Sbjct: 191 PEIMLNWM--HYNQTVDIWSVGCIMAELLTGR 220
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL-PEATNNFF------ 292
+ L Y+H ++H DLKPSN+L++ + DFGLA+ PE + F
Sbjct: 153 ILRGLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVA 209
Query: 293 --NFQIAEYGMGSE-VSTSGDVYSFGILLLETFTGK 325
++ E + S+ + S D++S G +L E + +
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 130 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 186
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 237 AVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF---N 293
A + +YLH +++ DLKP N+L+D + V DFG AK + T
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 203
Query: 294 FQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
+ E + + + D ++ G+L+ E G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 12/98 (12%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDG---ELTAHVGDFGLAKFLPEATNNFFNFQI 296
V S + Y+H + IVH DLKP N+LL+ + + DFGL+ EA+ +
Sbjct: 135 VLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKIG 190
Query: 297 AEYGMGSEV-----STSGDVYSFGILLLETFTGKRPTN 329
Y + EV DV+S G++L +G P N
Sbjct: 191 TAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 21/114 (18%)
Query: 227 NLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPE 286
+L+L + A +++AL YL VH D+ NVL+ +GDFGL++++ +
Sbjct: 487 SLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 543
Query: 287 ATNNFFNFQIAEYG------MGSE------VSTSGDVYSFGILLLETFT-GKRP 327
+T + A G M E +++ DV+ FG+ + E G +P
Sbjct: 544 ST-----YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 592
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 66/163 (40%), Gaps = 27/163 (16%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNR-----------EALKNLN 229
H N+V ++ +C + ++ EF G+L +L R + K+
Sbjct: 90 HLNVVNLLGACT----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145
Query: 230 LLQRL-SIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT 288
L+ L + VA +++L +H DL N+LL + + DFGLA+ + +
Sbjct: 146 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 202
Query: 289 NNF--------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + E + DV+SFG+LL E F+
Sbjct: 203 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 252 ETPIVHCDLKPSNVLLDGELTAHVGDFGLAK 282
E+ I+H DLKP+N LL+ + + V DFGLA+
Sbjct: 147 ESGIIHRDLKPANCLLNQDCSVKVCDFGLAR 177
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 16/104 (15%)
Query: 165 LRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREA 224
R +E L + N +N++++I F+ + LV+E + GS+ H ++
Sbjct: 58 FREVETLYQCQGN----KNILELIEF-----FEDDTRFYLVFEKLQGGSI--LAHIQKQ- 105
Query: 225 LKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLD 268
K+ N + + DVA+ALD+LH I H DLKP N+L +
Sbjct: 106 -KHFNEREASRVVRDVAAALDFLH---TKGIAHRDLKPENILCE 145
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 16/109 (14%)
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFNFQIAEYGM 301
+L Y+H + I H D+KP N+LLD + + DFG AK L N ++ + Y
Sbjct: 170 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN-VSYICSRYYR 225
Query: 302 GSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVK 343
E+ ++S DV+S G +L E G+ +F G+ + V+
Sbjct: 226 APELIFGATDYTSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 270
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 66/163 (40%), Gaps = 27/163 (16%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNR-----------EALKNLN 229
H N+V ++ +C + ++ EF G+L +L R + K+
Sbjct: 81 HLNVVNLLGACT----KPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 230 LLQRL-SIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT 288
L+ L + VA +++L +H DL N+LL + + DFGLA+ + +
Sbjct: 137 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 193
Query: 289 NNF--------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + E + DV+SFG+LL E F+
Sbjct: 194 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 12/112 (10%)
Query: 226 KNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDG---ELTAHVGDFGLAK 282
K + + I V S + Y+H + IVH DLKP N+LL+ + + DFGL+
Sbjct: 144 KRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLST 200
Query: 283 FLPEATNNFFNFQIAEYGMGSEV-----STSGDVYSFGILLLETFTGKRPTN 329
EA+ + Y + EV DV+S G++L +G P N
Sbjct: 201 HF-EASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFN 251
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 43/106 (40%), Gaps = 13/106 (12%)
Query: 231 LQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNN 290
LQ + IA AL L + ++H D+K N+LL +GDFG A + A N
Sbjct: 151 LQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-NX 209
Query: 291 FFNFQIAEYGMGSEV---------STSGDVYSFGILLLETFTGKRP 327
F Y M EV DV+S GI +E K P
Sbjct: 210 FVG---TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 252
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 66/163 (40%), Gaps = 27/163 (16%)
Query: 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNR-----------EALKNLN 229
H N+V ++ +C + ++ EF G+L +L R + K+
Sbjct: 81 HLNVVNLLGACT----KPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 230 LLQRL-SIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT 288
L+ L + VA +++L +H DL N+LL + + DFGLA+ + +
Sbjct: 137 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 193
Query: 289 NNF--------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + E + DV+SFG+LL E F+
Sbjct: 194 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 16/109 (14%)
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFNFQIAEYGM 301
+L Y+H + I H D+KP N+LLD + + DFG AK L N ++ + Y
Sbjct: 168 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN-VSYICSRYYR 223
Query: 302 GSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVK 343
E+ ++S DV+S G +L E G+ +F G+ + V+
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 268
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 16/109 (14%)
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFNFQIAEYGM 301
+L Y+H + I H D+KP N+LLD + + DFG AK L N ++ + Y
Sbjct: 172 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN-VSYICSRYYR 227
Query: 302 GSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVK 343
E+ ++S DV+S G +L E G+ +F G+ + V+
Sbjct: 228 APELIFGATDYTSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 272
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 140 ILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRA 196
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 12/112 (10%)
Query: 226 KNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDG---ELTAHVGDFGLAK 282
K + + I V S + Y+H + IVH DLKP N+LL+ + + DFGL+
Sbjct: 145 KRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLST 201
Query: 283 FLPEATNNFFNFQIAEYGMGSEV-----STSGDVYSFGILLLETFTGKRPTN 329
EA+ + Y + EV DV+S G++L +G P N
Sbjct: 202 HF-EASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFN 252
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 76/178 (42%), Gaps = 29/178 (16%)
Query: 134 IPSSIGSCIRLEQLVMNGNF-------FRG-----NIPSSLSSLRGIENLDLSRNNFIRH 181
+ +I I L++ + G F +RG I SS ++ + +RH
Sbjct: 23 VQRTIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRH 82
Query: 182 RNLVKIITSCASVDFQGNDSEA---LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
N++ I + D + N + LV ++ +GSL ++L NR + +++ +A+
Sbjct: 83 ENILGFI----AADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIK---LAL 133
Query: 239 DVASALDYLHHYC-----ETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF 291
AS L +LH + I H DLK N+L+ T + D GLA AT+
Sbjct: 134 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTI 191
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGLA+ + + ++
Sbjct: 136 ILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRA 192
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 43/106 (40%), Gaps = 13/106 (12%)
Query: 231 LQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNN 290
LQ + IA AL L + ++H D+K N+LL +GDFG A + A N
Sbjct: 112 LQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-NX 170
Query: 291 FFNFQIAEYGMGSEV---------STSGDVYSFGILLLETFTGKRP 327
F Y M EV DV+S GI +E K P
Sbjct: 171 FVG---TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 213
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 12/100 (12%)
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDG---ELTAHVGDFGLAKFLPEATNNFF 292
I V S + Y+H + IVH DLKP N+LL+ + + DFGL+ + T
Sbjct: 126 IIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD 182
Query: 293 NFQIAEYGMGSEV-----STSGDVYSFGILLLETFTGKRP 327
A Y + EV DV+S G++L +G P
Sbjct: 183 RIGTA-YYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 26/150 (17%)
Query: 191 CASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLS--IAVDVASALDYLH 248
CA FQ + +V E+M G L + N ++ ++ + +V ALD +H
Sbjct: 142 CA---FQDDKYLYMVMEYMPGGDL-------VNLMSNYDVPEKWAKFYTAEVVLALDAIH 191
Query: 249 HYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPE----------ATNNFFNFQIAE 298
++H D+KP N+LLD + DFG + E T ++ + ++ +
Sbjct: 192 ---SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLK 248
Query: 299 -YGMGSEVSTSGDVYSFGILLLETFTGKRP 327
G D +S G+ L E G P
Sbjct: 249 SQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 16/109 (14%)
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFNFQIAEYGM 301
+L Y+H + I H D+KP N+LLD + + DFG AK L N ++ + Y
Sbjct: 162 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN-VSYICSRYYR 217
Query: 302 GSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVK 343
E+ ++S DV+S G +L E G+ +F G+ + V+
Sbjct: 218 APELIFGATDYTSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 262
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 16/109 (14%)
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFNFQIAEYGM 301
+L Y+H + I H D+KP N+LLD + + DFG AK L N ++ + Y
Sbjct: 213 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN-VSYICSRYYR 268
Query: 302 GSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVK 343
E+ ++S DV+S G +L E G+ +F G+ + V+
Sbjct: 269 APELIFGATDYTSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 313
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 16/109 (14%)
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFNFQIAEYGM 301
+L Y+H + I H D+KP N+LLD + + DFG AK L N ++ + Y
Sbjct: 139 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN-VSYICSRYYR 194
Query: 302 GSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVK 343
E+ ++S DV+S G +L E G+ +F G+ + V+
Sbjct: 195 APELIFGATDYTSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 239
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 252 ETPIVHCDLKPSNVLLDGELTAHVGDFGLAK 282
E+ I+H DLKP+N LL+ + + + DFGLA+
Sbjct: 149 ESGIIHRDLKPANCLLNQDCSVKICDFGLAR 179
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 16/109 (14%)
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFNFQIAEYGM 301
+L Y+H + I H D+KP N+LLD + + DFG AK L N ++ + Y
Sbjct: 147 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN-VSYICSRYYR 202
Query: 302 GSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVK 343
E+ ++S DV+S G +L E G+ +F G+ + V+
Sbjct: 203 APELIFGATDYTSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 247
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 14/108 (12%)
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFN-----FQI 296
+L Y+H + I H D+KP N+LLD + + DFG AK L N ++
Sbjct: 168 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 224
Query: 297 AEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVK 343
E G ++ ++S DV+S G +L E G+ +F G+ + V+
Sbjct: 225 PELIFGATDYTSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 268
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 12/100 (12%)
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDG---ELTAHVGDFGLAKFLPEATNNFF 292
I V S + Y+H + IVH DLKP N+LL+ + + DFGL+ + T
Sbjct: 126 IIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD 182
Query: 293 NFQIAEYGMGSEV-----STSGDVYSFGILLLETFTGKRP 327
A Y + EV DV+S G++L +G P
Sbjct: 183 RIGTAYY-IAPEVLRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 46/109 (42%), Gaps = 17/109 (15%)
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLL--DGELTAHVGDFGLAKFL-PEA------TNNFF- 292
L+YLH I+H D+K NVLL DG A + DFG A L P+ T ++
Sbjct: 162 GLEYLH---TRRILHGDVKADNVLLSSDGSRAA-LCDFGHALCLQPDGLGKSLLTGDYIP 217
Query: 293 ---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTL 338
E MG D++S ++L G P + F G L L
Sbjct: 218 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCL 266
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 70/163 (42%), Gaps = 12/163 (7%)
Query: 170 NLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLN 229
N + R H N++ ++ +C S L+ +M GSL LH + ++
Sbjct: 55 NEECPRLRIFSHPNVLPVLGACQS---PPAPHPTLITHWMPYGSLYNVLHEGTNFV--VD 109
Query: 230 LLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATN 289
Q + A+D+A + +LH E I L +V++D ++TA + KF ++
Sbjct: 110 QSQAVKFALDMARGMAFLH-TLEPLIPRHALNSRSVMIDEDMTARIS-MADVKFSFQSPG 167
Query: 290 NFF-NFQIAEYGMGSEVST----SGDVYSFGILLLETFTGKRP 327
+ +A + + S D++SF +LL E T + P
Sbjct: 168 RMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVP 210
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 12/100 (12%)
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDG---ELTAHVGDFGLAKFLPEATNNFF 292
I V S + Y+H + IVH DLKP N+LL+ + + DFGL+ + T
Sbjct: 126 IIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD 182
Query: 293 NFQIAEYGMGSEV-----STSGDVYSFGILLLETFTGKRP 327
A Y + EV DV+S G++L +G P
Sbjct: 183 RIGTAYY-IAPEVLRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 46/109 (42%), Gaps = 17/109 (15%)
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLL--DGELTAHVGDFGLAKFL-PEA------TNNFF- 292
L+YLH I+H D+K NVLL DG A + DFG A L P+ T ++
Sbjct: 178 GLEYLH---TRRILHGDVKADNVLLSSDGSRAA-LCDFGHALCLQPDGLGKSLLTGDYIP 233
Query: 293 ---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTL 338
E MG D++S ++L G P + F G L L
Sbjct: 234 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCL 282
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + D+GLA+ + + ++
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRWYRA 190
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 16/109 (14%)
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFNFQIAEYGM 301
+L Y+H + I H D+KP N+LLD + + DFG AK L N ++ + Y
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN-VSYICSRYYR 189
Query: 302 GSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVK 343
E+ ++S DV+S G +L E G+ +F G+ + V+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 234
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
+ H++LV C D LV EF+ GSL+ +L N+ +N+L +L +A
Sbjct: 69 LSHKHLVLNYGVCVC-----GDENILVQEFVKFGSLDTYLKKNKNC---INILWKLEVAK 120
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGD 277
+A+A+ +L E ++H ++ N+LL E G+
Sbjct: 121 QLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGN 156
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 16/109 (14%)
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFNFQIAEYGM 301
+L Y+H + I H D+KP N+LLD + + DFG AK L N ++ + Y
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN-VSYICSRYYR 189
Query: 302 GSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVK 343
E+ ++S DV+S G +L E G+ +F G+ + V+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 234
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 76/177 (42%), Gaps = 29/177 (16%)
Query: 166 RGIENLDLSRN-----NFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP 220
RG+++ + +N N + H NL+++ + F+ + LV E++ G L + +
Sbjct: 125 RGMKDKEEVKNEISVMNQLDHANLIQLYDA-----FESKNDIVLVMEYVDGGELFDRI-- 177
Query: 221 NREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVG--DF 278
+ NL L + + + ++H + I+H DLKP N+L + DF
Sbjct: 178 -IDESYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDF 233
Query: 279 GLA-KFLPE-------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
GLA ++ P T F ++ Y VS D++S G++ +G P
Sbjct: 234 GLARRYKPREKLKVNFGTPEFLAPEVVNYDF---VSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK----------FLPEATN 289
+ L Y+H ++H DLKPSN+LL+ + DFGLA+ FL E
Sbjct: 135 ILRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 290 NFFNFQIAEYGMGSE-VSTSGDVYSFGILLLETFTGK 325
+ ++ E + S+ + S D++S G +L E + +
Sbjct: 192 TRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 16/101 (15%)
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFNFQIAEYGM 301
+L Y+H + I H D+KP N+LLD + + DFG AK L N ++ + Y
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN-VSYICSRYYR 189
Query: 302 GSEV-------STSGDVYSFGILLLETFTGKRPTNEMFTGN 335
E+ ++S DV+S G +L E G+ +F G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ----PIFPGD 226
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 14/108 (12%)
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFN-----FQI 296
+L Y+H + I H D+KP N+LLD + + DFG AK L N ++
Sbjct: 146 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 202
Query: 297 AEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVK 343
E G ++ ++S DV+S G +L E G+ +F G+ + V+
Sbjct: 203 PELIFGATDYTSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 246
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 46/109 (42%), Gaps = 17/109 (15%)
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLL--DGELTAHVGDFGLAKFL-PEA------TNNFF- 292
L+YLH I+H D+K NVLL DG A + DFG A L P+ T ++
Sbjct: 176 GLEYLH---TRRILHGDVKADNVLLSSDGSRAA-LCDFGHALCLQPDGLGKSLLTGDYIP 231
Query: 293 ---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTL 338
E MG D++S ++L G P + F G L L
Sbjct: 232 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCL 280
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 14/108 (12%)
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFN-----FQI 296
+L Y+H + I H D+KP N+LLD + + DFG AK L N ++
Sbjct: 153 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 209
Query: 297 AEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVK 343
E G ++ ++S DV+S G +L E G+ +F G+ + V+
Sbjct: 210 PELIFGATDYTSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 253
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 14/108 (12%)
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFN-----FQI 296
+L Y+H + I H D+KP N+LLD + + DFG AK L N ++
Sbjct: 142 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 198
Query: 297 AEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVK 343
E G ++ ++S DV+S G +L E G+ +F G+ + V+
Sbjct: 199 PELIFGATDYTSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 242
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 14/108 (12%)
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFN-----FQI 296
+L Y+H + I H D+KP N+LLD + + DFG AK L N ++
Sbjct: 146 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 202
Query: 297 AEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVK 343
E G ++ ++S DV+S G +L E G+ +F G+ + V+
Sbjct: 203 PELIFGATDYTSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 246
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 25/161 (15%)
Query: 177 NFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSL-EEWLHPNREALKNLNLLQRLS 235
+ H N++K+ F+ + LV E G L +E +H + N +
Sbjct: 91 KLLDHPNIMKLYDF-----FEDKRNYYLVMECYKGGELFDEIIHRMK-----FNEVDAAV 140
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDG---ELTAHVGDFGLA------KFLPE 286
I V S + YLH + IVH DLKP N+LL+ + + DFGL+ K + E
Sbjct: 141 IIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKE 197
Query: 287 ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
+ IA + + DV+S G++L G P
Sbjct: 198 RLGT--AYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPP 236
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 237 AVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF---N 293
A + +YLH +++ DLKP N+++D + V DFG AK + T
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE 204
Query: 294 FQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
+ E + + + D ++ G+L+ E G P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 237 AVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF---N 293
A + +YLH +++ DLKP N+++D + V DFG AK + T
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE 203
Query: 294 FQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
+ E + + + D ++ G+L+ E G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 75/175 (42%), Gaps = 29/175 (16%)
Query: 137 SIGSCIRLEQLVMNGNF-------FRG-----NIPSSLSSLRGIENLDLSRNNFIRHRNL 184
+I I L++ + G F +RG I SS ++ + +RH N+
Sbjct: 3 TIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI 62
Query: 185 VKIITSCASVDFQGNDSEA---LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVA 241
+ I + D + N + LV ++ +GSL ++L NR + +++ +A+ A
Sbjct: 63 LGFIAA----DNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIK---LALSTA 113
Query: 242 SALDYLHHYC-----ETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF 291
S L +LH + I H DLK N+L+ T + D GLA AT+
Sbjct: 114 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTI 168
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 14/108 (12%)
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFN-----FQI 296
+L Y+H + I H D+KP N+LLD + + DFG AK L N ++
Sbjct: 138 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 194
Query: 297 AEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVK 343
E G ++ ++S DV+S G +L E G+ +F G+ + V+
Sbjct: 195 PELIFGATDYTSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 238
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 33/161 (20%)
Query: 206 YEFMV----NGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLK 261
Y +MV N L WL + K+++ +R S ++ A+ +H + IVH DLK
Sbjct: 102 YIYMVMECGNIDLNSWL----KKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLK 154
Query: 262 PSNVLL-DGELTAHVGDFGLA-KFLPEATNNFFNFQIAEYGMG-----SEVSTS------ 308
P+N L+ DG L + DFG+A + P+ + Q+ ++S+S
Sbjct: 155 PANFLIVDGMLK--LIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKS 212
Query: 309 -------GDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFV 342
DV+S G +L GK P ++ LH +
Sbjct: 213 KSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 253
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 11/104 (10%)
Query: 228 LNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA 287
L L + + VA +++L +H DL N+LL + + DFGLA+ + +
Sbjct: 190 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246
Query: 288 TNNF--------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + E + DV+SFG+LL E F+
Sbjct: 247 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 14/108 (12%)
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFN-----FQI 296
+L Y+H + I H D+KP N+LLD + + DFG AK L N ++
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 190
Query: 297 AEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVK 343
E G ++ ++S DV+S G +L E G+ +F G+ + V+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 234
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 75/175 (42%), Gaps = 29/175 (16%)
Query: 137 SIGSCIRLEQLVMNGNF-------FRG-----NIPSSLSSLRGIENLDLSRNNFIRHRNL 184
+I I L++ + G F +RG I SS ++ + +RH N+
Sbjct: 1 TIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI 60
Query: 185 VKIITSCASVDFQGNDSEA---LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVA 241
+ I + D + N + LV ++ +GSL ++L NR + +++ +A+ A
Sbjct: 61 LGFIAA----DNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIK---LALSTA 111
Query: 242 SALDYLHHYC-----ETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF 291
S L +LH + I H DLK N+L+ T + D GLA AT+
Sbjct: 112 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTI 166
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 56/135 (41%), Gaps = 18/135 (13%)
Query: 235 SIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF-- 292
S + VA + +L +H DL N+LL + DFGLA+ + +N
Sbjct: 172 SFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKG 228
Query: 293 NFQIAEYGMGSE------VSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLTLHNFVKEA 345
N ++ M E + DV+S+GI L E F+ G P M + + +KE
Sbjct: 229 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS-KFYKMIKEG 287
Query: 346 L----PERL-AEIVD 355
PE AE+ D
Sbjct: 288 FRMLSPEHAPAEMYD 302
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 14/108 (12%)
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFN-----FQI 296
+L Y+H + I H D+KP N+LLD + + DFG AK L N ++
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 190
Query: 297 AEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVK 343
E G ++ ++S DV+S G +L E G+ +F G+ + V+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 234
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 11/104 (10%)
Query: 228 LNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA 287
L L + + VA +++L +H DL N+LL + + DFGLA+ + +
Sbjct: 188 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 244
Query: 288 TNNF--------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + E + DV+SFG+LL E F+
Sbjct: 245 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 14/108 (12%)
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFN-----FQI 296
+L Y+H + I H D+KP N+LLD + + DFG AK L N ++
Sbjct: 135 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 191
Query: 297 AEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVK 343
E G ++ ++S DV+S G +L E G+ +F G+ + V+
Sbjct: 192 PELIFGATDYTSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 235
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 14/108 (12%)
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFN-----FQI 296
+L Y+H + I H D+KP N+LLD + + DFG AK L N ++
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 190
Query: 297 AEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVK 343
E G ++ ++S DV+S G +L E G+ +F G+ + V+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 234
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLLDGELTA-HVGDFGLAKFLPEATNNFFN-----FQI 296
+L Y+H + I H D+KP N+LLD + + DFG AK L N ++
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 190
Query: 297 AEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEMFTGN 335
E G ++ ++S DV+S G +L E G+ +F G+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ----PIFPGD 226
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 11/104 (10%)
Query: 228 LNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA 287
L L + + VA +++L +H DL N+LL + + DFGLA+ + +
Sbjct: 197 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 253
Query: 288 TNNF--------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + E + DV+SFG+LL E F+
Sbjct: 254 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 12/89 (13%)
Query: 255 IVHCDLKPSNVLLDGELTAHVGDFGLAK--------FLPEATNNFFNFQIAEYGMGSEVS 306
++H DLKP N+L++ + DFGLA+ + E ++ +G S
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG-AKLYS 180
Query: 307 TSGDVYSFGILLLETFTGKRPTNEMFTGN 335
TS D++S G + E RP +F GN
Sbjct: 181 TSIDMWSAGCIFAELANAARP---LFPGN 206
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 11/104 (10%)
Query: 228 LNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA 287
L L + + VA +++L +H DL N+LL + + DFGLA+ + +
Sbjct: 195 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 251
Query: 288 TNNF--------FNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
+ + E + DV+SFG+LL E F+
Sbjct: 252 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 49/120 (40%), Gaps = 18/120 (15%)
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLL--DGELTAHVGDFGLAKFL-PEA------TNNFF- 292
L+YLH I+H D+K NVLL DG A + DFG A L P+ T ++
Sbjct: 197 GLEYLH---SRRILHGDVKADNVLLSSDGSHAA-LCDFGHAVCLQPDGLGKSLLTGDYIP 252
Query: 293 ---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEALPER 349
E +G DV+S ++L G P + F G L L E P R
Sbjct: 253 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCL-KIASEPPPVR 311
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 49/120 (40%), Gaps = 18/120 (15%)
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLL--DGELTAHVGDFGLAKFL-PEA------TNNFF- 292
L+YLH I+H D+K NVLL DG A + DFG A L P+ T ++
Sbjct: 178 GLEYLH---SRRILHGDVKADNVLLSSDGSHAA-LCDFGHAVCLQPDGLGKDLLTGDYIP 233
Query: 293 ---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEALPER 349
E +G DV+S ++L G P + F G L L E P R
Sbjct: 234 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCL-KIASEPPPVR 292
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
+ H++LV C F G D LV EF+ GSL+ +L N+ +N+L +L +A
Sbjct: 69 LSHKHLVLNYGVC----FCG-DENILVQEFVKFGSLDTYLKKNKNC---INILWKLEVAK 120
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGD 277
+A A+ +L E ++H ++ N+LL E G+
Sbjct: 121 QLAWAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGN 156
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 231 LQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLD-----GELTAHVGDFGLAKFLP 285
L+ +++ S L +LH IVH DLKP N+L+ G++ A + DFGL K L
Sbjct: 118 LEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA 174
Query: 286 EATNNF 291
++F
Sbjct: 175 VGRHSF 180
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 83/195 (42%), Gaps = 36/195 (18%)
Query: 148 VMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIRHRNLVKI--ITSCASVDFQGNDSEALV 205
+M+ N ++P + + ++NL RH+++ ++ + A+ F +V
Sbjct: 42 IMDKNTLGSDLPRIKTEIEALKNL--------RHQHICQLYHVLETANKIF-------MV 86
Query: 206 YEFMVNGSLEEWL-HPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSN 264
E+ G L +++ +R + + ++ R + SA+ Y+H H DLKP N
Sbjct: 87 LEYCPGGELFDYIISQDRLSEEETRVVFR-----QIVSAVAYVH---SQGYAHRDLKPEN 138
Query: 265 VLLDGELTAHVGDFGLAKFLPEATNNF--------FNFQIAEYGMG-SEVSTSGDVYSFG 315
+L D + DFGL P+ ++ + E G S + + DV+S G
Sbjct: 139 LLFDEYHKLKLIDFGLCA-KPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMG 197
Query: 316 ILLLETFTGKRPTNE 330
ILL G P ++
Sbjct: 198 ILLYVLMCGFLPFDD 212
>pdb|2Z7X|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 35.4 bits (80), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 115 GILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLS 174
G+ + + ++D+S N+++ S + C+ L+ LV+ N S SSL +E+LDLS
Sbjct: 23 GLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLS 82
Query: 175 RN 176
N
Sbjct: 83 YN 84
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 29/174 (16%)
Query: 138 IGSCIRLEQLVMNGNF-------FRG-----NIPSSLSSLRGIENLDLSRNNFIRHRNLV 185
I I L++ + G F +RG I SS ++ + +RH N++
Sbjct: 1 IARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENIL 60
Query: 186 KIITSCASVDFQGNDSEA---LVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVAS 242
I + D + N + LV ++ +GSL ++L NR + +++ +A+ AS
Sbjct: 61 GFIAA----DNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIK---LALSTAS 111
Query: 243 ALDYLHHYC-----ETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNF 291
L +LH + I H DLK N+L+ T + D GLA AT+
Sbjct: 112 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTI 165
>pdb|1P8V|A Chain A, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Alpha-thrombin At 2.6a
Length = 279
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 99 LDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNI 158
LDLS NQL LP L L +D+S N+L+ ++ L++L + GN +
Sbjct: 82 LDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLP 140
Query: 159 PSSLSSLRGIENLDLSRNNF 178
P L+ +E L L+ NN
Sbjct: 141 PGLLTPTPKLEKLSLANNNL 160
>pdb|1P9A|G Chain G, Crystal Structure Of N-terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-alpha At 1.7 Angstrom
Resolution
pdb|1QYY|A Chain A, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
pdb|1QYY|G Chain G, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
Length = 290
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 99 LDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNI 158
LDLS NQL LP L L +D+S N+L+ ++ L++L + GN +
Sbjct: 82 LDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLP 140
Query: 159 PSSLSSLRGIENLDLSRNNF 178
P L+ +E L L+ NN
Sbjct: 141 PGLLTPTPKLEKLSLANNNL 160
>pdb|1GWB|B Chain B, Structure Of Glycoprotein 1b
pdb|1GWB|A Chain A, Structure Of Glycoprotein 1b
Length = 281
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 99 LDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNI 158
LDLS NQL LP L L +D+S N+L+ ++ L++L + GN +
Sbjct: 83 LDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLP 141
Query: 159 PSSLSSLRGIENLDLSRNNF 178
P L+ +E L L+ NN
Sbjct: 142 PGLLTPTPKLEKLSLANNNL 161
>pdb|2Z80|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
pdb|2Z80|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 353
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 110 LPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIE 169
+PS G+ + + ++D+S N+++ S + C+ L+ LV+ N S SSL +E
Sbjct: 46 IPS--GLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLE 103
Query: 170 NLDLSRN 176
+LDLS N
Sbjct: 104 HLDLSYN 110
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 56/135 (41%), Gaps = 18/135 (13%)
Query: 235 SIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF-- 292
S + VA + +L +H DL N+LL + DFGLA+ + +N
Sbjct: 165 SFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 221
Query: 293 NFQIAEYGMGSE------VSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLTLHNFVKEA 345
N ++ M E + DV+S+GI L E F+ G P M + + +KE
Sbjct: 222 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS-KFYKMIKEG 280
Query: 346 L----PERL-AEIVD 355
PE AE+ D
Sbjct: 281 FRMLSPEHAPAEMYD 295
>pdb|3PMH|G Chain G, Mechanism Of Sulfotyrosine-Mediated Glycoprotein Ib
Interaction With Two Distinct Alpha-Thrombin Sites
Length = 290
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 99 LDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNI 158
LDLS NQL LP L L +D+S N+L+ ++ L++L + GN +
Sbjct: 82 LDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLP 140
Query: 159 PSSLSSLRGIENLDLSRNNF 178
P L+ +E L L+ NN
Sbjct: 141 PGLLTPTPKLEKLSLANNNL 160
>pdb|1OOK|G Chain G, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Human Alpha-thrombin
Length = 290
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 99 LDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNI 158
LDLS NQL LP L L +D+S N+L+ ++ L++L + GN +
Sbjct: 82 LDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLP 140
Query: 159 PSSLSSLRGIENLDLSRNNF 178
P L+ +E L L+ NN
Sbjct: 141 PGLLTPTPKLEKLSLANNNL 160
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 35.0 bits (79), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DFGL + + + ++
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWYRA 190
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 35.0 bits (79), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 56/135 (41%), Gaps = 18/135 (13%)
Query: 235 SIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF-- 292
S + VA + +L +H DL N+LL + DFGLA+ + +N
Sbjct: 172 SFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 228
Query: 293 NFQIAEYGMGSE------VSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLTLHNFVKEA 345
N ++ M E + DV+S+GI L E F+ G P M + + +KE
Sbjct: 229 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS-KFYKMIKEG 287
Query: 346 L----PERL-AEIVD 355
PE AE+ D
Sbjct: 288 FRMLSPEHAPAEMYD 302
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 35.0 bits (79), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 30/127 (23%)
Query: 225 LKNLNLL-----QRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLL---DGELT---- 272
LK+ N L Q +A + A+ +LH + + H DLKP N+L D ELT
Sbjct: 126 LKDNNYLPYPIHQVRHMAFQLCQAVKFLH---DNKLTHTDLKPENILFVNSDYELTYNLE 182
Query: 273 ------------AHVGDFGLAKFLPEATNNFF---NFQIAEYGMGSEVSTSGDVYSFGIL 317
V DFG A F E + +++ E + S DV+S G +
Sbjct: 183 KKRDERSVKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCI 242
Query: 318 LLETFTG 324
+ E + G
Sbjct: 243 IFEYYVG 249
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 35.0 bits (79), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 56/135 (41%), Gaps = 18/135 (13%)
Query: 235 SIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF-- 292
S + VA + +L +H DL N+LL + DFGLA+ + +N
Sbjct: 167 SFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 223
Query: 293 NFQIAEYGMGSE------VSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLTLHNFVKEA 345
N ++ M E + DV+S+GI L E F+ G P M + + +KE
Sbjct: 224 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS-KFYKMIKEG 282
Query: 346 L----PERL-AEIVD 355
PE AE+ D
Sbjct: 283 FRMLSPEHAPAEMYD 297
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 35.0 bits (79), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 85/202 (42%), Gaps = 31/202 (15%)
Query: 144 LEQLVMNGNFFRGNIPSSL--SSLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDS 201
LE+++ N R +P + + +++LD H N++KI F+ +
Sbjct: 48 LERVIKTINKDRSQVPMEQIEAEIEVLKSLD--------HPNIIKIFEV-----FEDYHN 94
Query: 202 EALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLK 261
+V E G L E + + K L+ + + +AL Y H +VH DLK
Sbjct: 95 MYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLK 151
Query: 262 PSNVLLDGELTAH----VGDFGLAKFLP--EATNNFFN--FQIAEYGMGSEVSTSGDVYS 313
P N+L + + H + DFGLA+ E + N +A +V+ D++S
Sbjct: 152 PENILFQ-DTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWS 210
Query: 314 FGILLLETFTGKRPTNEMFTGN 335
G+++ TG P FTG
Sbjct: 211 AGVVMYFLLTGCLP----FTGT 228
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 35.0 bits (79), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 12/112 (10%)
Query: 226 KNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDG---ELTAHVGDFGLAK 282
K + + I V S + Y H + IVH DLKP N+LL+ + + DFGL+
Sbjct: 121 KRFSEVDAARIIRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLST 177
Query: 283 FLPEATNNFFNFQIAEYGMGSEV-----STSGDVYSFGILLLETFTGKRPTN 329
EA+ + Y + EV DV+S G++L +G P N
Sbjct: 178 HF-EASKKXKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 35.0 bits (79), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 18/144 (12%)
Query: 207 EFMVNGSLEEWLHPNREALKNLNLLQRLS-IAVDVASALDYLHHYCETPIVHCDLKPSNV 265
E +NGS+ H RE+L + + +S I + SAL YLH+ I H D+KP N
Sbjct: 147 EEAINGSI----HGFRESLDFVQREKLISNIMRQIFSALHYLHN---QGICHRDIKPENF 199
Query: 266 LLDGELTAHVG--DFGLAKFLPEATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323
L + + DFGL+K + N + YGM ++ T + +L T
Sbjct: 200 LFSTNKSFEIKLVDFGLSKEFYKLNNGEY------YGMTTKAGTP--YFVAPEVLNTTNE 251
Query: 324 GKRPTNEMFTGNLTLHNFVKEALP 347
P + ++ + LH + A+P
Sbjct: 252 SYGPKCDAWSAGVLLHLLLMGAVP 275
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 35.0 bits (79), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 30/127 (23%)
Query: 234 LSIAVDVASALDYLHHYCETPIVHCDLKPSNVLL--DGELTAH-----------VGDFGL 280
+S+ +AS + +LH I+H DLKP N+L+ TA + DFGL
Sbjct: 136 ISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 281 AKFL-------------PEATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKR 326
K L P T+ + ++ E ++ S D++S G + + GK
Sbjct: 193 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
Query: 327 PTNEMFT 333
P + ++
Sbjct: 253 PFGDKYS 259
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 35.0 bits (79), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 56/135 (41%), Gaps = 18/135 (13%)
Query: 235 SIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF-- 292
S + VA + +L +H DL N+LL + DFGLA+ + +N
Sbjct: 149 SFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 205
Query: 293 NFQIAEYGMGSE------VSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLTLHNFVKEA 345
N ++ M E + DV+S+GI L E F+ G P M + + +KE
Sbjct: 206 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS-KFYKMIKEG 264
Query: 346 L----PERL-AEIVD 355
PE AE+ D
Sbjct: 265 FRMLSPEHAPAEMYD 279
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 35.0 bits (79), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 92/237 (38%), Gaps = 46/237 (19%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
+ H ++V+I D G+ +V E++ SL+ R + L + + ++ +
Sbjct: 136 VVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLK------RSKGQKLPVAEAIAYLL 189
Query: 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGE--------LTAHVGDFGLAKFLPEATNN 290
++ AL YLH +V+ DLKP N++L E + + FG P
Sbjct: 190 EILPALSYLHSIG---LVYNDLKPENIMLTEEQLKLIDLGAVSRINSFGYLYGTP----- 241
Query: 291 FFNFQIAE-YGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEALPER 349
FQ E G V+T D+Y+ G L T PT + + LPE
Sbjct: 242 --GFQAPEIVRTGPTVAT--DIYTVG-RTLAALTLDLPTR---------NGRYVDGLPED 287
Query: 350 LAEIVDPVLLVEREEGETSK----ANAHKQFTRSFSVKECLVSVLGIGVTCSSELPR 402
DPVL G + + ++FT + + L VL V + +PR
Sbjct: 288 -----DPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLREVVAQDTGVPR 339
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 35.0 bits (79), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 30/127 (23%)
Query: 234 LSIAVDVASALDYLHHYCETPIVHCDLKPSNVLL--DGELTAH-----------VGDFGL 280
+S+ +AS + +LH I+H DLKP N+L+ TA + DFGL
Sbjct: 136 ISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 281 AKFL-------------PEATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKR 326
K L P T+ + ++ E ++ S D++S G + + GK
Sbjct: 193 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
Query: 327 PTNEMFT 333
P + ++
Sbjct: 253 PFGDKYS 259
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 235 SIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPE-------A 287
+I ++A AL Y H ++H D+KP N+LL + + DFG + P
Sbjct: 127 TIMEELADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCG 183
Query: 288 TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVK 343
T ++ ++ E M +E D++ G+L E G P E + N T VK
Sbjct: 184 TLDYLPPEMIEGRMHNE---KVDLWCIGVLCYELLVGN-PPFESASHNETYRRIVK 235
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 74/177 (41%), Gaps = 17/177 (9%)
Query: 160 SSLSSLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLH 219
S +S RG+ ++ R I + L + + V ++ L+ E + G L ++L
Sbjct: 49 QSRASRRGVSREEIEREVSILRQVLHHNVITLHDV-YENRTDVVLILELVSGGELFDFLA 107
Query: 220 PNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNV-LLDGEL-TAHVG- 276
++L+ + S + ++YLH I H DLKP N+ LLD + H+
Sbjct: 108 QK----ESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 277 -DFGLAKFLPEAT--NNFF---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
DFGLA + + N F F E + D++S G++ +G P
Sbjct: 161 IDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 10/74 (13%)
Query: 235 SIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNF 294
SI V LDYLH C+ I+H D+KP N+L+ V D + + EAT +
Sbjct: 144 SIIRQVLQGLDYLHSKCK--IIHTDIKPENILM------CVDDAYVRRMAAEATE--WQK 193
Query: 295 QIAEYGMGSEVSTS 308
A GS VST+
Sbjct: 194 AGAPPPSGSAVSTA 207
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 7/78 (8%)
Query: 257 HCDLKPSNVLLDGELTAHVGDFGLAKFLPEA-------TNNFFNFQIAEYGMGSEVSTSG 309
H D+KP N+L+ + A++ DFG+A + T + E S +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 310 DVYSFGILLLETFTGKRP 327
D+Y+ +L E TG P
Sbjct: 217 DIYALTCVLYECLTGSPP 234
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 74/177 (41%), Gaps = 17/177 (9%)
Query: 160 SSLSSLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLH 219
S +S RG+ ++ R I + L + + V ++ L+ E + G L ++L
Sbjct: 49 QSRASRRGVSREEIEREVSILRQVLHHNVITLHDV-YENRTDVVLILELVSGGELFDFLA 107
Query: 220 PNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNV-LLDGEL-TAHVG- 276
++L+ + S + ++YLH I H DLKP N+ LLD + H+
Sbjct: 108 QK----ESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 277 -DFGLAKFLPEAT--NNFF---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
DFGLA + + N F F E + D++S G++ +G P
Sbjct: 161 IDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 74/177 (41%), Gaps = 17/177 (9%)
Query: 160 SSLSSLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLH 219
S +S RG+ ++ R I + L + + V ++ L+ E + G L ++L
Sbjct: 49 QSRASRRGVSREEIEREVSILRQVLHHNVITLHDV-YENRTDVVLILELVSGGELFDFLA 107
Query: 220 PNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNV-LLDGEL-TAHVG- 276
++L+ + S + ++YLH I H DLKP N+ LLD + H+
Sbjct: 108 QK----ESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 277 -DFGLAKFLPEAT--NNFF---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
DFGLA + + N F F E + D++S G++ +G P
Sbjct: 161 IDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 74/177 (41%), Gaps = 17/177 (9%)
Query: 160 SSLSSLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLH 219
S +S RG+ ++ R I + L + + V ++ L+ E + G L ++L
Sbjct: 49 QSRASRRGVSREEIEREVSILRQVLHHNVITLHDV-YENRTDVVLILELVSGGELFDFLA 107
Query: 220 PNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNV-LLDGEL-TAHVG- 276
++L+ + S + ++YLH I H DLKP N+ LLD + H+
Sbjct: 108 QK----ESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 277 -DFGLAKFLPEAT--NNFF---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
DFGLA + + N F F E + D++S G++ +G P
Sbjct: 161 IDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 74/177 (41%), Gaps = 17/177 (9%)
Query: 160 SSLSSLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLH 219
S +S RG+ ++ R I + L + + V ++ L+ E + G L ++L
Sbjct: 49 QSRASRRGVSREEIEREVSILRQVLHHNVITLHDV-YENRTDVVLILELVSGGELFDFLA 107
Query: 220 PNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNV-LLDGEL-TAHVG- 276
++L+ + S + ++YLH I H DLKP N+ LLD + H+
Sbjct: 108 QK----ESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 277 -DFGLAKFLPEAT--NNFF---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
DFGLA + + N F F E + D++S G++ +G P
Sbjct: 161 IDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + DF LA+ + + ++
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATRWYRA 190
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + FGLA+ + + ++
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATRWYRA 190
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + D GLA+ + + ++
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATRWYRA 190
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 28/171 (16%)
Query: 175 RNNFIRHRNLVKIITSCASV----DFQGNDSEA-LVYEFMVNGSLEEWLHPNREALKNLN 229
R + ++++ SC V + N SE L+ E+ G + P + + N
Sbjct: 72 RAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSEN 131
Query: 230 LLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLD-----GELTAHVGDFGLAKFL 284
+ RL + + YLH + IVH DLKP N+LL G++ + DFG+++ +
Sbjct: 132 DVIRL--IKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIK--IVDFGMSRKI 184
Query: 285 PEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
A T + +I Y ++T+ D+++ GI+ T P
Sbjct: 185 GHACELREIMGTPEYLAPEILNY---DPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + D GLA+ + + ++
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATRWYRA 190
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 63/160 (39%), Gaps = 21/160 (13%)
Query: 177 NFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSI 236
++H N+V++ S + F LV++ + G L E +
Sbjct: 85 RLLKHPNIVRLHDSISEEGFH-----YLVFDLVTGGEL-------FEDIVAREYYSEADA 132
Query: 237 AVDVASALDYLHHYCETPIVHCDLKPSNVLLDGEL---TAHVGDFGLAKFLPEATNNFFN 293
+ + L+ ++H + IVH DLKP N+LL + + DFGLA + +F
Sbjct: 133 SHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFG 192
Query: 294 FQIAEYGMGSEVSTSG------DVYSFGILLLETFTGKRP 327
F + EV D+++ G++L G P
Sbjct: 193 FAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 8/138 (5%)
Query: 91 GLSSLSIYLDLSQNQLN-GPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVM 149
GLSSL + L ++ N LP F L+NL +D+S+ +L P++ S L+ L M
Sbjct: 443 GLSSLEV-LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNM 501
Query: 150 NGNFFRGNIPSSLSSLRGIENLDLSRNNFI--RHRNLVKIITSCASVDFQGNDSEALVYE 207
+ N F L ++ LD S N+ + + + L +S A ++ ND A E
Sbjct: 502 SHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF-ACTCE 560
Query: 208 FMVNGSLEEWLHPNREAL 225
+ S +W+ R+ L
Sbjct: 561 ---HQSFLQWIKDQRQLL 575
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 7/96 (7%)
Query: 84 TTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGI---LKNLGAIDISENKLSGQIPSSIGS 140
T + +GL L +LD + L S F + L+NL +DIS
Sbjct: 387 TMSSNFLGLEQLE-HLDFQHSNLKQM--SEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG 443
Query: 141 CIRLEQLVMNGNFFRGN-IPSSLSSLRGIENLDLSR 175
LE L M GN F+ N +P + LR + LDLS+
Sbjct: 444 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 479
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Query: 243 ALDYLHHYCETPIVHCDLKPSNVLLDGE-LTAHVGDFGLAKFL 284
L Y+H ++H DLKP+N+ ++ E L +GDFGLA+ +
Sbjct: 132 GLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIM 171
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 21/135 (15%)
Query: 162 LSSLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVY------EFMVNGSLE 215
+++LR I+ L L ++H N+V +I C + N +A +Y E + G L
Sbjct: 62 ITALREIKILQL-----LKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLS 116
Query: 216 EWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHV 275
L L + + + + L Y+H I+H D+K +NVL+ + +
Sbjct: 117 N-------VLVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKL 166
Query: 276 GDFGLAKFLPEATNN 290
DFGLA+ A N+
Sbjct: 167 ADFGLARAFSLAKNS 181
>pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin,
The Archetypal Small Leucine-Rich Repeat Proteoglycan
Length = 330
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 99 LDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFR--- 155
LDL N++ +F LKNL + + NK+S P + ++LE+L ++ N +
Sbjct: 57 LDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELP 116
Query: 156 GNIPSSLSSLRGIEN 170
+P +L LR EN
Sbjct: 117 EKMPKTLQELRVHEN 131
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 255 IVHCDLKPSNVLLDGELTAHVGDFGLAK 282
I+H DLKP+N L++ + + V DFGLA+
Sbjct: 177 ILHRDLKPANCLVNQDCSVKVCDFGLAR 204
>pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1
pdb|1XEC|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
pdb|1XEC|B Chain B, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
Length = 329
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 99 LDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFR--- 155
LDL N++ +F LKNL + + NK+S P + ++LE+L ++ N +
Sbjct: 57 LDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELP 116
Query: 156 GNIPSSLSSLRGIEN 170
+P +L LR EN
Sbjct: 117 EKMPKTLQELRVHEN 131
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 6/46 (13%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVL---LDGELTAHVGDFGLAK 282
V A+ YLH + IVH DLKP N+L LD + + DFGL+K
Sbjct: 125 VLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
>pdb|1SQ0|B Chain B, Crystal Structure Of The Complex Of The Wild-Type Von
Willebrand Factor A1 Domain And Glycoprotein Ib Alpha At
2.6 Angstrom Resolution
Length = 288
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 99 LDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNI 158
LDLS NQL LP L L +D+S N+L+ ++ L++L + GN +
Sbjct: 82 LDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLP 140
Query: 159 PSSLSSLRGIENLDLSRNNF 178
P L+ +E L L+ N+
Sbjct: 141 PGLLTPTPKLEKLSLANNDL 160
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 33/167 (19%)
Query: 178 FIRHRNLVKIITSCASVDFQGNDSEA---LVYEFMVNGSLEEWLHPNREALKNLNLLQRL 234
+RH N++ I S D +S L+ + +GSL ++L R+ L+ +L RL
Sbjct: 58 LLRHDNILGFIAS----DMTSRNSSTQLWLITHYHEHGSLYDFL--QRQTLEP-HLALRL 110
Query: 235 SIAVDVASALDYLH-----HYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPE--- 286
AV A L +LH + I H D K NVL+ L + D GLA +
Sbjct: 111 --AVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSD 168
Query: 287 ----------ATNNFFNFQIAEYGMGSEVSTS---GDVYSFGILLLE 320
T + ++ + + ++ S D+++FG++L E
Sbjct: 169 YLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWE 215
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 235 SIAVDVASALDYLHHYCETPIVHCDLKPSNVLL 267
I V LDYLH C I+H D+KP N+LL
Sbjct: 150 KIIQQVLQGLDYLHTKCR--IIHTDIKPENILL 180
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 8/138 (5%)
Query: 91 GLSSLSIYLDLSQNQLN-GPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVM 149
GLSSL + L ++ N LP F L+NL +D+S+ +L P++ S L+ L M
Sbjct: 467 GLSSLEV-LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNM 525
Query: 150 NGNFFRGNIPSSLSSLRGIENLDLSRNNFI--RHRNLVKIITSCASVDFQGNDSEALVYE 207
+ N F L ++ LD S N+ + + + L +S A ++ ND A E
Sbjct: 526 SHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF-ACTCE 584
Query: 208 FMVNGSLEEWLHPNREAL 225
+ S +W+ R+ L
Sbjct: 585 ---HQSFLQWIKDQRQLL 599
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 7/96 (7%)
Query: 84 TTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGI---LKNLGAIDISENKLSGQIPSSIGS 140
T + +GL L +LD + L S F + L+NL +DIS
Sbjct: 411 TMSSNFLGLEQLE-HLDFQHSNLKQM--SEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG 467
Query: 141 CIRLEQLVMNGNFFRGN-IPSSLSSLRGIENLDLSR 175
LE L M GN F+ N +P + LR + LDLS+
Sbjct: 468 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 503
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 6/46 (13%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVL---LDGELTAHVGDFGLAK 282
V A+ YLH + IVH DLKP N+L LD + + DFGL+K
Sbjct: 125 VLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFN---FQI 296
+ L Y+H I+H DLKPSN+ ++ + + D GLA+ + + ++
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATRWYRA 190
Query: 297 AEYGMGS-EVSTSGDVYSFGILLLETFTGK 325
E + + + D++S G ++ E TG+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 235 SIAVDVASALDYLHHYCETPIVHCDLKPSNVLL 267
I V LDYLH C I+H D+KP N+LL
Sbjct: 134 KIIQQVLQGLDYLHTKCR--IIHTDIKPENILL 164
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 6/46 (13%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVL---LDGELTAHVGDFGLAK 282
V A+ YLH + IVH DLKP N+L LD + + DFGL+K
Sbjct: 125 VLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 80/173 (46%), Gaps = 33/173 (19%)
Query: 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAV 238
++HRN++++ + N L++E+ N L++++ N + ++ +++ S
Sbjct: 90 LQHRNIIELKSV-----IHHNHRLHLIFEYAEN-DLKKYMDKNPDV--SMRVIK--SFLY 139
Query: 239 DVASALDYLH-HYCETPIVHCDLKPSNVLL---DGELTA--HVGDFGLAKFLPEATNNFF 292
+ + +++ H C +H DLKP N+LL D T +GDFGLA+ F
Sbjct: 140 QLINGVNFCHSRRC----LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFT 195
Query: 293 N------FQIAEYGMGS-EVSTSGDVYSFGILLLET------FTGKRPTNEMF 332
+ ++ E +GS STS D++S + E F G +++F
Sbjct: 196 HEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLF 248
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 6/46 (13%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVL---LDGELTAHVGDFGLAK 282
V A+ YLH + IVH DLKP N+L LD + + DFGL+K
Sbjct: 125 VLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
>pdb|3P72|A Chain A, Structure Of Platelet Glycoprotein 1b Alpha With A Bound
Peptide Inhibitor
Length = 269
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 99 LDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNI 158
LDLS NQL LP L L +D+S N+L+ ++ L++L + GN +
Sbjct: 82 LDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLP 140
Query: 159 PSSLSSLRGIENLDLSRNNF 178
P L+ +E L L+ N
Sbjct: 141 PGLLTPTPKLEKLSLANNQL 160
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 17/177 (9%)
Query: 160 SSLSSLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLH 219
S +S RG+ ++ R I + L I + V ++ L+ E + G L ++L
Sbjct: 49 QSRASRRGVCREEIEREVSILRQVLHPNIITLHDV-YENRTDVVLILELVSGGELFDFLA 107
Query: 220 PNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNV-LLDGEL-TAHVG- 276
++L+ + S + ++YLH I H DLKP N+ LLD + H+
Sbjct: 108 QK----ESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 277 -DFGLAKFLPEAT--NNFF---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
DFGLA + + N F F E + D++S G++ +G P
Sbjct: 161 IDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1U0N|D Chain D, The Ternary Von Willebrand Factor A1-Glycoprotein Ibalpha-
Botrocetin Complex
Length = 265
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 99 LDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNI 158
LDLS NQL LP L L +D+S N+L+ ++ L++L + GN +
Sbjct: 82 LDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLP 140
Query: 159 PSSLSSLRGIENLDLSRNNF 178
P L+ +E L L+ N
Sbjct: 141 PGLLTPTPKLEKLSLANNQL 160
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 59/139 (42%), Gaps = 13/139 (9%)
Query: 196 FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255
F+ L+ EF+ G L +R A ++ + + I + A + L H E I
Sbjct: 117 FEDKYEMVLILEFLSGGELF-----DRIAAEDYKMSEAEVINY-MRQACEGLKHMHEHSI 170
Query: 256 VHCDLKPSNVLLDGELTAHVG--DFGLA-KFLPE----ATNNFFNFQIAEYGMGSEVSTS 308
VH D+KP N++ + + + V DFGLA K P+ T F E V
Sbjct: 171 VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFY 230
Query: 309 GDVYSFGILLLETFTGKRP 327
D+++ G+L +G P
Sbjct: 231 TDMWAIGVLGYVLLSGLSP 249
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 14/99 (14%)
Query: 255 IVHCDLKPSNVLL-DGELTAHVGDFGLAKFL-PEATNNFF----NFQIAEYGMGSE-VST 307
+ H D+KP NVL+ + + T + DFG AK L P N + ++ E G++ +T
Sbjct: 152 VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTT 211
Query: 308 SGDVYSFGILLLETFTGKRPTNEMFTGNLT---LHNFVK 343
+ D++S G + E G+ +F G+ + LH V+
Sbjct: 212 AVDIWSVGCIFAEMMLGE----PIFRGDNSAGQLHEIVR 246
>pdb|1M0Z|A Chain A, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
pdb|1M0Z|B Chain B, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
Length = 290
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 99 LDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNI 158
LDLS NQL LP L L +D+S N+L+ ++ L++L + GN +
Sbjct: 82 LDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLP 140
Query: 159 PSSLSSLRGIENLDLSRNNF 178
P L+ +E L L+ N
Sbjct: 141 PGLLTPTPKLEKLSLANNQL 160
>pdb|1M10|B Chain B, Crystal Structure Of The Complex Of Glycoprotein Ib Alpha
And The Von Willebrand Factor A1 Domain
Length = 290
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 99 LDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNI 158
LDLS NQL LP L L +D+S N+L+ ++ L++L + GN +
Sbjct: 82 LDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLP 140
Query: 159 PSSLSSLRGIENLDLSRNNF 178
P L+ +E L L+ N
Sbjct: 141 PGLLTPTPKLEKLSLANNQL 160
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 8/138 (5%)
Query: 91 GLSSLSIYLDLSQNQLN-GPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVM 149
GLSSL + L ++ N LP F L+NL +D+S+ +L P++ S L+ L M
Sbjct: 148 GLSSLEV-LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNM 206
Query: 150 NGNFFRGNIPSSLSSLRGIENLDLSRNNFI--RHRNLVKIITSCASVDFQGNDSEALVYE 207
+ N F L ++ LD S N+ + + + L +S A ++ ND A E
Sbjct: 207 SHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF-ACTCE 265
Query: 208 FMVNGSLEEWLHPNREAL 225
+ S +W+ R+ L
Sbjct: 266 ---HQSFLQWIKDQRQLL 280
Score = 28.5 bits (62), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 7/96 (7%)
Query: 84 TTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGI---LKNLGAIDISENKLSGQIPSSIGS 140
T + +GL L +LD + L S F + L+NL +DIS
Sbjct: 92 TMSSNFLGLEQLE-HLDFQHSNLKQM--SEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG 148
Query: 141 CIRLEQLVMNGNFFRGN-IPSSLSSLRGIENLDLSR 175
LE L M GN F+ N +P + LR + LDLS+
Sbjct: 149 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 184
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 36/92 (39%), Gaps = 16/92 (17%)
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQ 295
I + A+ YLH I H D+KP N+L + P A +F
Sbjct: 122 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKR-------------PNAILKLTDFG 165
Query: 296 IAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327
A+ G + S D++S G+++ G P
Sbjct: 166 FAKETTGEKYDKSCDMWSLGVIMYILLCGYPP 197
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 6/46 (13%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLL---DGELTAHVGDFGLAK 282
V A+ YLH IVH DLKP N+L D E + DFGL+K
Sbjct: 129 VLDAVYYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSK 171
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 12/89 (13%)
Query: 255 IVHCDLKPSNVLLDGELTAHVGDFGLAK--------FLPEATNNFFNFQIAEYGMGSEVS 306
++H DLKP N+L++ + +FGLA+ + E ++ +G S
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG-AKLYS 180
Query: 307 TSGDVYSFGILLLETFTGKRPTNEMFTGN 335
TS D++S G + E RP +F GN
Sbjct: 181 TSIDMWSAGCIFAELANAGRP---LFPGN 206
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 9/97 (9%)
Query: 240 VASALDYLHHYCETPIVHCDLKPSNVLLDGEL---TAHVGDFGLAKFLPEATNNFFNFQI 296
+ L+ + H + +VH DLKP N+LL +L + DFGLA + +F F
Sbjct: 127 IQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAG 186
Query: 297 AEYGMGSEVSTSG------DVYSFGILLLETFTGKRP 327
+ EV D+++ G++L G P
Sbjct: 187 TPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 223
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 25/111 (22%)
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVL-LDGEL------------------TAHVG 276
+A + AL +LH E + H DLKP N+L ++ E + V
Sbjct: 137 MAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA 193
Query: 277 DFGLAKFLPEATNNFF---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTG 324
DFG A F E +++ E + + DV+S G +L E + G
Sbjct: 194 DFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 244
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 82/193 (42%), Gaps = 45/193 (23%)
Query: 160 SSLSSLRGIENLDLSRN----NFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLE 215
+ +S G+ DL R + ++H ++V+++ + +S + +V+EFM L
Sbjct: 60 AKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSS-----DGMLYMVFEFMDGADL- 113
Query: 216 EWLHPNREALKNLNLLQRLSIAV------DVASALDYLHHYCETPIVHCDLKPSNVLL-- 267
E +K + S AV + AL Y H + I+H D+KP NVLL
Sbjct: 114 -----CFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPENVLLAS 165
Query: 268 -DGELTAHVGDFGLAKFLPEA---------TNNFFNFQIAE---YGMGSEVSTSGDVYSF 314
+ +GDFG+A L E+ T +F ++ + YG DV+
Sbjct: 166 KENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYG------KPVDVWGC 219
Query: 315 GILLLETFTGKRP 327
G++L +G P
Sbjct: 220 GVILFILLSGCLP 232
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 25/111 (22%)
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVL-LDGEL------------------TAHVG 276
+A + AL +LH E + H DLKP N+L ++ E + V
Sbjct: 128 MAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA 184
Query: 277 DFGLAKFLPEATNNFF---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTG 324
DFG A F E +++ E + + DV+S G +L E + G
Sbjct: 185 DFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 235
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 55/153 (35%), Gaps = 44/153 (28%)
Query: 244 LDYLHHYCETPIVHCDLKPSNVLLDGELT----AHVGDFGLAKFLPEATNNF-------- 291
LD +H+ ++H DLKP+N+L+ GE + D G A+
Sbjct: 138 LDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVV 197
Query: 292 -FNFQIAEYGMGSEVSTSG-DVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEALPER 349
F ++ E +G+ T D+++ G + E T
Sbjct: 198 TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS------------------------- 232
Query: 350 LAEIVDPVLLVEREEGETSKANAHKQFTRSFSV 382
+P+ +E+ +TS H Q R F+V
Sbjct: 233 -----EPIFHCRQEDIKTSNPYHHDQLDRIFNV 260
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 9/85 (10%)
Query: 255 IVHCDLKPSNVLLDGELTAHVGDFGLAK-FLPEATNNFFN-------FQIAEYGMGSEVS 306
I H D+KP N+LLD + DFGLA F N + E E
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 307 TSG-DVYSFGILLLETFTGKRPTNE 330
DV+S GI+L G+ P ++
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 21/135 (15%)
Query: 162 LSSLRGIENLDLSRNNFIRHRNLVKIITSC---ASVDFQGNDSEALVYEFM---VNGSLE 215
+++LR I+ L L ++H N+V +I C AS + S LV++F + G L
Sbjct: 62 ITALREIKILQL-----LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLS 116
Query: 216 EWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHV 275
L L + + + + L Y+H I+H D+K +NVL+ + +
Sbjct: 117 N-------VLVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKL 166
Query: 276 GDFGLAKFLPEATNN 290
DFGLA+ A N+
Sbjct: 167 ADFGLARAFSLAKNS 181
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 9/85 (10%)
Query: 255 IVHCDLKPSNVLLDGELTAHVGDFGLAK-FLPEATNNFFN-------FQIAEYGMGSEVS 306
I H D+KP N+LLD + DFGLA F N + E E
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 307 TSG-DVYSFGILLLETFTGKRPTNE 330
DV+S GI+L G+ P ++
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 9/85 (10%)
Query: 255 IVHCDLKPSNVLLDGELTAHVGDFGLAK-FLPEATNNFFN-------FQIAEYGMGSEVS 306
I H D+KP N+LLD + DFGLA F N + E E
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 307 TSG-DVYSFGILLLETFTGKRPTNE 330
DV+S GI+L G+ P ++
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 25/111 (22%)
Query: 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVL-LDGEL------------------TAHVG 276
+A + AL +LH E + H DLKP N+L ++ E + V
Sbjct: 160 MAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA 216
Query: 277 DFGLAKFLPEATNNFF---NFQIAEYGMGSEVSTSGDVYSFGILLLETFTG 324
DFG A F E +++ E + + DV+S G +L E + G
Sbjct: 217 DFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 267
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 9/85 (10%)
Query: 255 IVHCDLKPSNVLLDGELTAHVGDFGLAK-FLPEATNNFFN-------FQIAEYGMGSEVS 306
I H D+KP N+LLD + DFGLA F N + E E
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 307 TSG-DVYSFGILLLETFTGKRPTNE 330
DV+S GI+L G+ P ++
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 9/85 (10%)
Query: 255 IVHCDLKPSNVLLDGELTAHVGDFGLAK-FLPEATNNFFN-------FQIAEYGMGSEVS 306
I H D+KP N+LLD + DFGLA F N + E E
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 307 TSG-DVYSFGILLLETFTGKRPTNE 330
DV+S GI+L G+ P ++
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 9/85 (10%)
Query: 255 IVHCDLKPSNVLLDGELTAHVGDFGLAK-FLPEATNNFFN-------FQIAEYGMGSEVS 306
I H D+KP N+LLD + DFGLA F N + E E
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 307 TSG-DVYSFGILLLETFTGKRPTNE 330
DV+S GI+L G+ P ++
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 9/85 (10%)
Query: 255 IVHCDLKPSNVLLDGELTAHVGDFGLAK-FLPEATNNFFN-------FQIAEYGMGSEVS 306
I H D+KP N+LLD + DFGLA F N + E E
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 183
Query: 307 TSG-DVYSFGILLLETFTGKRPTNE 330
DV+S GI+L G+ P ++
Sbjct: 184 AEPVDVWSCGIVLTAMLAGELPWDQ 208
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 21/135 (15%)
Query: 162 LSSLRGIENLDLSRNNFIRHRNLVKIITSC---ASVDFQGNDSEALVYEFM---VNGSLE 215
+++LR I+ L L ++H N+V +I C AS + S LV++F + G L
Sbjct: 62 ITALREIKILQL-----LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLS 116
Query: 216 EWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHV 275
L L + + + + L Y+H I+H D+K +NVL+ + +
Sbjct: 117 N-------VLVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKL 166
Query: 276 GDFGLAKFLPEATNN 290
DFGLA+ A N+
Sbjct: 167 ADFGLARAFSLAKNS 181
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 9/85 (10%)
Query: 255 IVHCDLKPSNVLLDGELTAHVGDFGLAK-FLPEATNNFFN-------FQIAEYGMGSEVS 306
I H D+KP N+LLD + DFGLA F N + E E
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 307 TSG-DVYSFGILLLETFTGKRPTNE 330
DV+S GI+L G+ P ++
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 9/85 (10%)
Query: 255 IVHCDLKPSNVLLDGELTAHVGDFGLAK-FLPEATNNFFN-------FQIAEYGMGSEVS 306
I H D+KP N+LLD + DFGLA F N + E E
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 307 TSG-DVYSFGILLLETFTGKRPTNE 330
DV+S GI+L G+ P ++
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 9/85 (10%)
Query: 255 IVHCDLKPSNVLLDGELTAHVGDFGLAK-FLPEATNNFFN-------FQIAEYGMGSEVS 306
I H D+KP N+LLD + DFGLA F N + E E
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 185
Query: 307 TSG-DVYSFGILLLETFTGKRPTNE 330
DV+S GI+L G+ P ++
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 9/85 (10%)
Query: 255 IVHCDLKPSNVLLDGELTAHVGDFGLAK-FLPEATNNFFN-------FQIAEYGMGSEVS 306
I H D+KP N+LLD + DFGLA F N + E E
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 307 TSG-DVYSFGILLLETFTGKRPTNE 330
DV+S GI+L G+ P ++
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 46/112 (41%), Gaps = 18/112 (16%)
Query: 234 LSIAVDVASALDYLHHYCETPIVHCDLKPSNVLL--DGELTAHVGDFGLA-KFLP----- 285
L + + + L+Y+H E VH D+K +N+LL ++ D+GL+ ++ P
Sbjct: 154 LQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHK 210
Query: 286 -------EATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNE 330
+ N F + G +S DV G +L GK P +
Sbjct: 211 QYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQ 262
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 9/85 (10%)
Query: 255 IVHCDLKPSNVLLDGELTAHVGDFGLAK-FLPEATNNFFN-------FQIAEYGMGSEVS 306
I H D+KP N+LLD + DFGLA F N + E E
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 307 TSG-DVYSFGILLLETFTGKRPTNE 330
DV+S GI+L G+ P ++
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 9/85 (10%)
Query: 255 IVHCDLKPSNVLLDGELTAHVGDFGLAK-FLPEATNNFFN-------FQIAEYGMGSEVS 306
I H D+KP N+LLD + DFGLA F N + E E
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 307 TSG-DVYSFGILLLETFTGKRPTNE 330
DV+S GI+L G+ P ++
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 9/85 (10%)
Query: 255 IVHCDLKPSNVLLDGELTAHVGDFGLAK-FLPEATNNFFN-------FQIAEYGMGSEVS 306
I H D+KP N+LLD + DFGLA F N + E E
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 307 TSG-DVYSFGILLLETFTGKRPTNE 330
DV+S GI+L G+ P ++
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 21/135 (15%)
Query: 162 LSSLRGIENLDLSRNNFIRHRNLVKIITSC---ASVDFQGNDSEALVYEFM---VNGSLE 215
+++LR I+ L L ++H N+V +I C AS + S LV++F + G L
Sbjct: 61 ITALREIKILQL-----LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLS 115
Query: 216 EWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHV 275
L L + + + + L Y+H I+H D+K +NVL+ + +
Sbjct: 116 N-------VLVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKL 165
Query: 276 GDFGLAKFLPEATNN 290
DFGLA+ A N+
Sbjct: 166 ADFGLARAFSLAKNS 180
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 9/85 (10%)
Query: 255 IVHCDLKPSNVLLDGELTAHVGDFGLAK-FLPEATNNFFN-------FQIAEYGMGSEVS 306
I H D+KP N+LLD + DFGLA F N + E E
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 307 TSG-DVYSFGILLLETFTGKRPTNE 330
DV+S GI+L G+ P ++
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQ 209
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.136 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,016,376
Number of Sequences: 62578
Number of extensions: 489959
Number of successful extensions: 2812
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 432
Number of HSP's that attempted gapping in prelim test: 1527
Number of HSP's gapped (non-prelim): 1191
length of query: 427
length of database: 14,973,337
effective HSP length: 102
effective length of query: 325
effective length of database: 8,590,381
effective search space: 2791873825
effective search space used: 2791873825
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)