Query 042634
Match_columns 427
No_of_seqs 398 out of 2513
Neff 9.7
Searched_HMMs 46136
Date Fri Mar 29 08:06:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042634.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042634hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 5E-57 1.1E-61 488.3 27.0 387 2-420 433-954 (968)
2 KOG0192 Tyrosine kinase specif 100.0 4.2E-43 9.2E-48 331.3 13.7 203 179-422 96-308 (362)
3 KOG0581 Mitogen-activated prot 100.0 6.7E-43 1.5E-47 315.2 9.6 196 179-413 134-335 (364)
4 KOG1187 Serine/threonine prote 100.0 7E-41 1.5E-45 318.5 16.2 216 179-418 128-353 (361)
5 KOG0197 Tyrosine kinases [Sign 100.0 3.3E-41 7.1E-46 317.8 10.1 198 179-419 258-463 (468)
6 KOG0591 NIMA (never in mitosis 100.0 1E-40 2.2E-45 289.3 10.5 202 179-416 75-284 (375)
7 KOG0615 Serine/threonine prote 100.0 2.2E-41 4.9E-46 307.6 6.6 194 179-413 233-437 (475)
8 KOG0575 Polo-like serine/threo 100.0 9.5E-41 2.1E-45 318.0 8.8 189 179-413 75-269 (592)
9 KOG4721 Serine/threonine prote 100.0 9.3E-41 2E-45 313.8 5.7 216 162-421 152-372 (904)
10 KOG0661 MAPK related serine/th 100.0 2.7E-39 5.8E-44 299.0 7.8 218 180-413 67-291 (538)
11 KOG0595 Serine/threonine-prote 100.0 3.2E-39 6.9E-44 293.9 7.8 141 179-331 66-217 (429)
12 KOG0578 p21-activated serine/t 100.0 4.6E-38 9.9E-43 297.4 11.6 191 179-413 327-523 (550)
13 KOG0598 Ribosomal protein S6 k 100.0 3.1E-38 6.8E-43 284.9 9.2 182 179-405 82-269 (357)
14 KOG0592 3-phosphoinositide-dep 100.0 2.9E-38 6.4E-43 296.4 9.1 189 179-413 131-338 (604)
15 KOG1026 Nerve growth factor re 100.0 1.6E-38 3.5E-43 313.9 7.2 201 179-420 546-765 (774)
16 KOG0198 MEKK and related serin 100.0 2E-38 4.4E-43 290.8 5.9 198 179-416 71-279 (313)
17 KOG0593 Predicted protein kina 100.0 7.5E-38 1.6E-42 274.1 8.8 217 179-412 58-283 (396)
18 KOG0588 Serine/threonine prote 100.0 4.9E-38 1.1E-42 300.9 7.9 191 177-413 67-263 (786)
19 cd05102 PTKc_VEGFR3 Catalytic 100.0 5.9E-37 1.3E-41 293.5 12.4 202 180-420 69-337 (338)
20 KOG0583 Serine/threonine prote 100.0 8.1E-37 1.8E-41 291.3 11.6 192 180-418 78-279 (370)
21 KOG0582 Ste20-like serine/thre 100.0 6.3E-37 1.4E-41 281.3 9.9 204 176-413 78-293 (516)
22 PHA02988 hypothetical protein; 100.0 1E-36 2.3E-41 284.3 10.9 202 179-419 75-281 (283)
23 KOG0658 Glycogen synthase kina 100.0 2.1E-37 4.6E-42 279.0 4.9 227 178-413 73-306 (364)
24 KOG0193 Serine/threonine prote 100.0 6.4E-37 1.4E-41 290.8 7.5 201 179-420 445-656 (678)
25 KOG1095 Protein tyrosine kinas 100.0 6.6E-37 1.4E-41 312.9 8.1 203 179-422 752-966 (1025)
26 KOG0660 Mitogen-activated prot 100.0 8.1E-37 1.7E-41 274.7 6.3 219 179-413 78-310 (359)
27 KOG0033 Ca2+/calmodulin-depend 100.0 1.4E-36 3E-41 258.7 6.2 195 176-412 64-266 (355)
28 KOG0659 Cdk activating kinase 100.0 9.2E-36 2E-40 256.7 11.2 214 179-413 58-281 (318)
29 KOG0599 Phosphorylase kinase g 100.0 3.2E-36 6.9E-41 260.3 8.4 194 178-413 79-283 (411)
30 KOG0616 cAMP-dependent protein 100.0 2.4E-36 5.3E-41 264.0 7.2 141 179-331 101-244 (355)
31 KOG2345 Serine/threonine prote 100.0 1.2E-35 2.7E-40 253.4 10.7 210 175-417 71-300 (302)
32 KOG1989 ARK protein kinase fam 100.0 1.1E-35 2.5E-40 295.0 11.0 203 179-420 92-314 (738)
33 KOG4278 Protein tyrosine kinas 100.0 1.1E-35 2.4E-40 282.1 9.2 198 179-419 320-525 (1157)
34 KOG0600 Cdc2-related protein k 100.0 1.4E-35 3.1E-40 276.2 9.2 214 179-412 173-399 (560)
35 KOG0589 Serine/threonine prote 100.0 1.1E-35 2.5E-40 279.4 7.7 192 179-413 60-258 (426)
36 KOG0611 Predicted serine/threo 100.0 6.6E-35 1.4E-39 264.6 11.7 188 179-413 110-303 (668)
37 KOG0194 Protein tyrosine kinas 100.0 1E-35 2.2E-40 285.0 6.7 199 179-421 218-424 (474)
38 cd05106 PTKc_CSF-1R Catalytic 100.0 5.5E-35 1.2E-39 283.1 11.0 199 180-418 100-373 (374)
39 KOG0605 NDR and related serine 100.0 4.4E-35 9.5E-40 275.2 9.3 190 179-411 198-443 (550)
40 KOG0604 MAP kinase-activated p 100.0 5.3E-35 1.2E-39 255.8 9.0 203 179-413 112-322 (400)
41 cd05096 PTKc_DDR1 Catalytic do 100.0 8.6E-35 1.9E-39 274.4 11.2 203 179-415 76-303 (304)
42 cd05104 PTKc_Kit Catalytic dom 100.0 1.1E-34 2.3E-39 281.3 11.6 198 180-417 97-374 (375)
43 KOG4257 Focal adhesion tyrosin 100.0 3.7E-35 8.1E-40 278.7 7.9 197 179-420 448-652 (974)
44 cd07862 STKc_CDK6 Catalytic do 100.0 9.5E-35 2.1E-39 272.1 10.4 218 179-412 61-286 (290)
45 KOG0663 Protein kinase PITSLRE 100.0 7.4E-35 1.6E-39 258.5 9.0 223 179-413 132-361 (419)
46 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.7E-34 3.7E-39 267.0 11.6 195 179-417 63-265 (266)
47 PTZ00267 NIMA-related protein 100.0 6.1E-35 1.3E-39 291.4 8.9 194 179-413 122-323 (478)
48 KOG0597 Serine-threonine prote 100.0 7.4E-35 1.6E-39 274.2 8.8 188 179-413 58-251 (808)
49 cd05571 STKc_PKB Catalytic dom 100.0 5.7E-35 1.2E-39 277.9 8.2 189 179-413 52-251 (323)
50 cd05612 STKc_PRKX_like Catalyt 100.0 1.1E-34 2.3E-39 272.0 9.7 189 179-413 58-254 (291)
51 KOG0585 Ca2+/calmodulin-depend 100.0 1.2E-34 2.6E-39 268.0 9.3 194 179-414 165-373 (576)
52 cd05048 PTKc_Ror Catalytic Dom 100.0 2.5E-34 5.4E-39 268.3 11.6 197 179-416 65-282 (283)
53 cd05111 PTK_HER3 Pseudokinase 100.0 3.7E-34 8.1E-39 266.7 12.3 199 179-422 66-273 (279)
54 cd05052 PTKc_Abl Catalytic dom 100.0 4.5E-34 9.7E-39 263.7 12.7 196 179-417 59-262 (263)
55 cd05585 STKc_YPK1_like Catalyt 100.0 1.4E-34 3E-39 273.9 9.4 188 179-412 50-246 (312)
56 cd05054 PTKc_VEGFR Catalytic d 100.0 4.3E-34 9.3E-39 273.2 12.7 202 179-419 68-335 (337)
57 KOG0694 Serine/threonine prote 100.0 2E-34 4.4E-39 278.0 10.4 181 180-407 427-613 (694)
58 cd05631 STKc_GRK4 Catalytic do 100.0 2.7E-34 5.8E-39 268.5 10.7 195 179-413 57-261 (285)
59 cd05094 PTKc_TrkC Catalytic do 100.0 3.5E-34 7.6E-39 268.5 11.3 203 179-422 64-287 (291)
60 cd06649 PKc_MEK2 Catalytic dom 100.0 4.7E-34 1E-38 272.6 12.3 141 179-330 60-204 (331)
61 KOG0201 Serine/threonine prote 100.0 3.5E-35 7.6E-40 269.6 4.2 190 179-413 68-263 (467)
62 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.6E-34 3.5E-39 276.6 8.9 224 179-413 56-290 (338)
63 cd08228 STKc_Nek6 Catalytic do 100.0 5.6E-34 1.2E-38 263.6 12.2 202 179-418 59-266 (267)
64 KOG0594 Protein kinase PCTAIRE 100.0 4E-34 8.8E-39 258.1 10.8 231 176-417 64-308 (323)
65 KOG0584 Serine/threonine prote 100.0 1.5E-34 3.3E-39 276.3 8.4 194 179-413 98-296 (632)
66 PTZ00263 protein kinase A cata 100.0 1.5E-34 3.2E-39 275.7 8.3 189 179-413 75-271 (329)
67 KOG0196 Tyrosine kinase, EPH ( 100.0 1E-35 2.3E-40 289.1 0.4 197 179-419 687-893 (996)
68 cd07848 STKc_CDKL5 Catalytic d 100.0 4.1E-34 8.9E-39 267.4 10.8 216 179-412 57-283 (287)
69 PTZ00426 cAMP-dependent protei 100.0 1.6E-34 3.6E-39 276.2 8.2 189 179-413 88-284 (340)
70 cd05618 STKc_aPKC_iota Catalyt 100.0 1.7E-34 3.7E-39 275.2 8.3 194 179-412 53-261 (329)
71 cd05108 PTKc_EGFR Catalytic do 100.0 2.4E-34 5.1E-39 272.9 9.0 197 179-420 66-271 (316)
72 cd05093 PTKc_TrkB Catalytic do 100.0 5.1E-34 1.1E-38 267.0 11.1 202 179-421 64-283 (288)
73 cd05592 STKc_nPKC_theta_delta 100.0 3.2E-34 7E-39 271.8 9.8 187 179-411 53-246 (316)
74 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 4.4E-34 9.6E-39 266.7 10.6 207 179-418 63-282 (283)
75 KOG0580 Serine/threonine prote 100.0 3.2E-34 6.9E-39 243.7 8.5 191 179-413 79-273 (281)
76 cd05115 PTKc_Zap-70 Catalytic 100.0 7.4E-34 1.6E-38 261.4 11.7 194 179-417 52-255 (257)
77 cd05595 STKc_PKB_beta Catalyti 100.0 3.1E-34 6.7E-39 272.8 9.1 189 179-413 52-251 (323)
78 cd05593 STKc_PKB_gamma Catalyt 100.0 3.1E-34 6.7E-39 273.3 9.0 189 179-413 52-251 (328)
79 cd05620 STKc_nPKC_delta Cataly 100.0 3.2E-34 7E-39 271.8 9.0 187 179-411 53-246 (316)
80 cd05105 PTKc_PDGFR_alpha Catal 100.0 6.8E-34 1.5E-38 276.8 11.4 199 180-418 99-398 (400)
81 PF07714 Pkinase_Tyr: Protein 100.0 1.5E-34 3.2E-39 266.4 6.2 193 179-414 58-259 (259)
82 cd05588 STKc_aPKC Catalytic do 100.0 3.3E-34 7.1E-39 273.3 8.6 194 179-412 53-261 (329)
83 cd05590 STKc_nPKC_eta Catalyti 100.0 3.3E-34 7.1E-39 272.2 8.6 183 179-407 53-241 (320)
84 cd05116 PTKc_Syk Catalytic dom 100.0 1E-33 2.2E-38 260.5 11.5 193 179-417 53-255 (257)
85 cd07869 STKc_PFTAIRE1 Catalyti 100.0 4.2E-34 9E-39 269.6 8.9 221 179-412 60-287 (303)
86 KOG4279 Serine/threonine prote 100.0 2.3E-34 4.9E-39 276.3 6.8 192 179-412 629-831 (1226)
87 cd05608 STKc_GRK1 Catalytic do 100.0 8.4E-34 1.8E-38 264.4 10.3 197 179-413 50-257 (280)
88 KOG1094 Discoidin domain recep 100.0 2.4E-34 5.2E-39 271.5 6.6 203 179-417 592-804 (807)
89 cd05072 PTKc_Lyn Catalytic dom 100.0 1.2E-33 2.7E-38 260.4 11.1 196 179-417 58-261 (261)
90 cd05594 STKc_PKB_alpha Catalyt 100.0 2.3E-34 5.1E-39 274.0 6.4 189 179-413 52-252 (325)
91 cd07871 STKc_PCTAIRE3 Catalyti 100.0 7.5E-34 1.6E-38 265.9 9.7 218 179-413 60-285 (288)
92 cd06650 PKc_MEK1 Catalytic dom 100.0 1.6E-33 3.4E-38 269.0 12.1 141 179-330 60-204 (333)
93 cd05619 STKc_nPKC_theta Cataly 100.0 7E-34 1.5E-38 269.4 9.4 188 179-412 53-247 (316)
94 cd05053 PTKc_FGFR Catalytic do 100.0 1.4E-33 3.1E-38 264.5 11.4 198 180-418 74-292 (293)
95 cd05089 PTKc_Tie1 Catalytic do 100.0 2E-33 4.4E-38 264.1 12.4 202 179-421 60-279 (297)
96 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.8E-33 3.8E-38 258.7 11.7 192 179-414 56-255 (256)
97 cd05062 PTKc_IGF-1R Catalytic 100.0 8.6E-34 1.9E-38 263.9 9.7 197 179-416 66-277 (277)
98 cd08229 STKc_Nek7 Catalytic do 100.0 2.5E-33 5.4E-38 259.2 12.6 201 179-417 59-265 (267)
99 cd05589 STKc_PKN Catalytic dom 100.0 1.2E-33 2.5E-38 269.0 10.8 187 179-412 59-256 (324)
100 PHA03212 serine/threonine kina 100.0 1.7E-33 3.6E-38 273.8 11.9 219 179-412 140-375 (391)
101 cd05035 PTKc_Axl_like Catalyti 100.0 3E-33 6.5E-38 259.4 13.1 203 179-417 58-272 (273)
102 cd05082 PTKc_Csk Catalytic dom 100.0 1.7E-33 3.7E-38 258.8 11.2 197 179-417 56-256 (256)
103 cd05591 STKc_nPKC_epsilon Cata 100.0 5.9E-34 1.3E-38 270.7 8.3 189 179-413 53-254 (321)
104 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 6.6E-34 1.4E-38 271.8 8.6 197 179-413 58-257 (333)
105 cd05075 PTKc_Axl Catalytic dom 100.0 2.7E-33 5.8E-38 259.8 12.4 203 179-417 57-271 (272)
106 cd05058 PTKc_Met_Ron Catalytic 100.0 2E-33 4.3E-38 259.1 11.5 198 179-419 53-261 (262)
107 cd05584 STKc_p70S6K Catalytic 100.0 8.5E-34 1.8E-38 269.8 9.2 189 179-413 57-256 (323)
108 cd05049 PTKc_Trk Catalytic dom 100.0 2.4E-33 5.1E-38 261.2 11.9 196 179-415 65-279 (280)
109 cd05607 STKc_GRK7 Catalytic do 100.0 1.4E-33 3.1E-38 262.4 10.4 196 179-413 50-250 (277)
110 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.8E-33 3.9E-38 258.7 10.8 193 179-415 56-256 (256)
111 cd05047 PTKc_Tie Catalytic dom 100.0 2.3E-33 5.1E-38 260.0 11.6 198 180-418 54-269 (270)
112 cd05045 PTKc_RET Catalytic dom 100.0 2.4E-33 5.1E-38 262.7 11.7 200 179-419 60-288 (290)
113 cd07863 STKc_CDK4 Catalytic do 100.0 2.1E-33 4.5E-38 262.7 11.1 221 179-412 59-284 (288)
114 cd05148 PTKc_Srm_Brk Catalytic 100.0 2.5E-33 5.5E-38 258.3 11.5 196 179-417 59-261 (261)
115 cd05109 PTKc_HER2 Catalytic do 100.0 2.9E-33 6.3E-38 260.6 11.8 197 179-420 66-271 (279)
116 cd05043 PTK_Ryk Pseudokinase d 100.0 3E-33 6.6E-38 260.6 11.9 202 179-420 65-279 (280)
117 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 3.5E-33 7.6E-38 257.7 12.0 190 179-414 61-261 (262)
118 KOG0667 Dual-specificity tyros 100.0 9.4E-34 2E-38 273.1 8.3 139 182-331 248-391 (586)
119 cd05575 STKc_SGK Catalytic dom 100.0 9E-34 1.9E-38 269.7 8.1 184 179-408 53-242 (323)
120 cd05088 PTKc_Tie2 Catalytic do 100.0 2.9E-33 6.3E-38 263.8 11.5 201 179-420 65-283 (303)
121 PLN00034 mitogen-activated pro 100.0 4.4E-33 9.5E-38 268.2 12.9 189 179-413 129-328 (353)
122 cd05101 PTKc_FGFR2 Catalytic d 100.0 4.4E-33 9.4E-38 262.8 12.5 200 180-420 79-299 (304)
123 cd05570 STKc_PKC Catalytic dom 100.0 1.5E-33 3.2E-38 267.6 9.2 188 180-413 54-252 (318)
124 cd05084 PTKc_Fes Catalytic dom 100.0 3.4E-33 7.3E-38 256.1 11.2 193 179-415 50-251 (252)
125 cd05060 PTKc_Syk_like Catalyti 100.0 3.8E-33 8.2E-38 256.6 11.6 194 179-418 53-256 (257)
126 KOG4645 MAPKKK (MAP kinase kin 100.0 2.5E-34 5.5E-39 293.0 3.8 191 179-413 1291-1494(1509)
127 cd05602 STKc_SGK1 Catalytic do 100.0 1E-33 2.2E-38 269.6 7.7 188 179-412 53-246 (325)
128 cd05033 PTKc_EphR Catalytic do 100.0 6.3E-33 1.4E-37 256.5 12.7 195 179-417 62-265 (266)
129 cd05055 PTKc_PDGFR Catalytic d 100.0 3.6E-33 7.7E-38 263.0 11.2 196 180-417 97-301 (302)
130 cd05614 STKc_MSK2_N N-terminal 100.0 1.4E-33 3.1E-38 269.4 8.5 192 180-413 63-267 (332)
131 KOG4717 Serine/threonine prote 100.0 3E-33 6.5E-38 260.6 10.3 192 176-412 71-269 (864)
132 cd05068 PTKc_Frk_like Catalyti 100.0 6E-33 1.3E-37 255.9 12.3 196 179-417 58-261 (261)
133 cd05091 PTKc_Ror2 Catalytic do 100.0 3.7E-33 8.1E-38 260.4 11.0 197 179-416 65-282 (283)
134 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 4.3E-33 9.3E-38 258.8 11.3 191 179-415 73-274 (274)
135 PTZ00283 serine/threonine prot 100.0 1.4E-33 3.1E-38 281.9 8.5 199 179-413 88-297 (496)
136 cd05099 PTKc_FGFR4 Catalytic d 100.0 6.8E-33 1.5E-37 262.6 12.6 201 180-421 76-297 (314)
137 cd05032 PTKc_InsR_like Catalyt 100.0 3.6E-33 7.9E-38 259.5 10.5 196 179-415 66-276 (277)
138 cd08529 STKc_FA2-like Catalyti 100.0 5.2E-33 1.1E-37 255.3 11.3 192 179-413 56-253 (256)
139 cd05059 PTKc_Tec_like Catalyti 100.0 3.9E-33 8.5E-38 256.4 10.3 192 179-414 56-255 (256)
140 cd05056 PTKc_FAK Catalytic dom 100.0 5.3E-33 1.2E-37 257.6 11.3 197 179-420 64-268 (270)
141 cd05582 STKc_RSK_N N-terminal 100.0 4.9E-34 1.1E-38 270.9 4.4 185 179-409 55-245 (318)
142 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1E-32 2.2E-37 255.0 13.0 202 179-418 59-266 (267)
143 cd05098 PTKc_FGFR1 Catalytic d 100.0 6.1E-33 1.3E-37 262.1 11.5 201 180-421 82-303 (307)
144 KOG0610 Putative serine/threon 100.0 6E-33 1.3E-37 253.1 10.8 192 179-412 134-391 (459)
145 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.8E-32 3.9E-37 253.8 14.0 200 179-415 52-267 (268)
146 cd05090 PTKc_Ror1 Catalytic do 100.0 7.8E-33 1.7E-37 258.3 11.5 197 179-416 64-282 (283)
147 cd05616 STKc_cPKC_beta Catalyt 100.0 2.8E-33 6E-38 266.3 8.6 183 179-407 58-246 (323)
148 PTZ00036 glycogen synthase kin 100.0 5E-33 1.1E-37 274.6 10.5 224 179-413 116-351 (440)
149 cd05092 PTKc_TrkA Catalytic do 100.0 3.8E-33 8.1E-38 260.0 9.1 196 179-415 64-279 (280)
150 cd05617 STKc_aPKC_zeta Catalyt 100.0 2.8E-33 6E-38 266.7 8.3 189 179-407 53-248 (327)
151 cd05071 PTKc_Src Catalytic dom 100.0 9E-33 2E-37 254.9 11.4 195 179-417 58-260 (262)
152 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 6E-33 1.3E-37 255.5 10.2 191 179-415 56-258 (258)
153 cd05063 PTKc_EphR_A2 Catalytic 100.0 6.1E-33 1.3E-37 256.8 10.2 195 179-417 63-267 (268)
154 cd05603 STKc_SGK2 Catalytic do 100.0 2.3E-33 5.1E-38 266.6 7.4 184 179-408 53-242 (321)
155 cd05604 STKc_SGK3 Catalytic do 100.0 1.6E-33 3.4E-38 268.3 6.1 187 179-411 53-245 (325)
156 cd05069 PTKc_Yes Catalytic dom 100.0 1.6E-32 3.4E-37 253.0 12.4 194 179-416 58-259 (260)
157 cd05036 PTKc_ALK_LTK Catalytic 100.0 8.3E-33 1.8E-37 257.3 10.6 196 179-415 66-276 (277)
158 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 9.4E-33 2E-37 257.8 11.0 208 179-417 62-283 (284)
159 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.3E-32 2.8E-37 257.0 11.7 211 179-417 63-283 (284)
160 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.4E-32 3E-37 254.7 11.8 200 179-415 52-268 (269)
161 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.5E-32 3.4E-37 263.3 12.4 202 179-419 68-341 (343)
162 cd07868 STKc_CDK8 Catalytic do 100.0 5.7E-33 1.2E-37 263.6 9.2 146 179-331 55-219 (317)
163 cd05110 PTKc_HER4 Catalytic do 100.0 1.2E-32 2.7E-37 259.5 11.2 197 179-420 66-271 (303)
164 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.6E-32 3.4E-37 253.0 11.6 194 179-416 58-259 (260)
165 cd05605 STKc_GRK4_like Catalyt 100.0 9.6E-33 2.1E-37 258.0 10.2 195 179-413 57-261 (285)
166 cd05573 STKc_ROCK_NDR_like Cat 100.0 4.4E-33 9.6E-38 268.0 8.1 192 179-413 58-285 (350)
167 cd07853 STKc_NLK Catalytic dom 100.0 7.5E-33 1.6E-37 268.5 9.4 222 179-413 56-288 (372)
168 cd05587 STKc_cPKC Catalytic do 100.0 5.7E-33 1.2E-37 264.3 8.4 182 180-407 59-246 (324)
169 cd05066 PTKc_EphR_A Catalytic 100.0 1.9E-32 4.1E-37 253.4 11.7 195 179-417 62-266 (267)
170 cd05042 PTKc_Aatyk Catalytic d 100.0 1.7E-32 3.8E-37 254.0 11.3 200 179-415 52-268 (269)
171 cd06625 STKc_MEKK3_like Cataly 100.0 8.7E-33 1.9E-37 254.9 9.2 191 179-413 61-260 (263)
172 cd05596 STKc_ROCK Catalytic do 100.0 7.1E-33 1.5E-37 268.1 9.0 192 179-413 100-304 (370)
173 cd05051 PTKc_DDR Catalytic dom 100.0 1.4E-32 3.1E-37 258.1 10.9 203 179-415 76-295 (296)
174 cd05039 PTKc_Csk_like Catalyti 100.0 1.7E-32 3.7E-37 252.1 11.1 196 179-417 57-256 (256)
175 cd05065 PTKc_EphR_B Catalytic 100.0 2.6E-32 5.7E-37 252.7 12.4 195 179-417 62-268 (269)
176 cd08227 PK_STRAD_alpha Pseudok 100.0 2.1E-32 4.5E-37 260.8 11.9 220 179-413 56-307 (327)
177 cd05628 STKc_NDR1 Catalytic do 100.0 9.6E-33 2.1E-37 266.8 9.7 141 179-331 58-239 (363)
178 cd05085 PTKc_Fer Catalytic dom 100.0 2E-32 4.4E-37 250.6 11.3 193 179-415 49-249 (250)
179 cd05044 PTKc_c-ros Catalytic d 100.0 1.6E-32 3.4E-37 254.1 10.6 197 179-416 56-269 (269)
180 cd00192 PTKc Catalytic domain 100.0 3.2E-32 6.9E-37 250.6 12.4 196 179-415 53-262 (262)
181 cd06654 STKc_PAK1 Catalytic do 100.0 1.1E-32 2.4E-37 259.0 9.5 191 179-413 74-270 (296)
182 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.5E-32 3.3E-37 267.2 10.6 157 227-418 235-400 (401)
183 PHA03207 serine/threonine kina 100.0 1.9E-32 4.2E-37 267.2 11.2 218 179-413 143-375 (392)
184 PHA03209 serine/threonine kina 100.0 1.9E-32 4.1E-37 264.1 11.0 138 179-328 114-256 (357)
185 cd05586 STKc_Sck1_like Catalyt 100.0 2.8E-33 6.1E-38 267.2 5.2 188 180-412 54-252 (330)
186 cd06637 STKc_TNIK Catalytic do 100.0 8.9E-33 1.9E-37 256.2 8.4 197 179-412 60-268 (272)
187 cd05095 PTKc_DDR2 Catalytic do 100.0 3.2E-32 6.9E-37 255.9 12.2 204 179-416 76-296 (296)
188 cd05040 PTKc_Ack_like Catalyti 100.0 1.8E-32 3.9E-37 252.0 10.3 194 179-415 53-256 (257)
189 cd05601 STKc_CRIK Catalytic do 100.0 4E-33 8.7E-38 266.1 6.2 193 179-413 58-263 (330)
190 cd07874 STKc_JNK3 Catalytic do 100.0 1.1E-32 2.3E-37 265.8 9.2 224 179-413 73-311 (355)
191 cd06645 STKc_MAP4K3 Catalytic 100.0 1.6E-32 3.4E-37 253.9 10.0 194 179-413 63-265 (267)
192 cd06638 STKc_myosinIIIA Cataly 100.0 1.3E-32 2.8E-37 257.1 9.4 201 180-414 73-284 (286)
193 cd05100 PTKc_FGFR3 Catalytic d 100.0 3.2E-32 7E-37 260.3 12.3 199 180-419 76-295 (334)
194 cd05097 PTKc_DDR_like Catalyti 100.0 3.4E-32 7.5E-37 255.5 12.1 203 179-415 74-294 (295)
195 cd05626 STKc_LATS2 Catalytic d 100.0 1.6E-32 3.4E-37 267.0 10.1 141 179-331 58-251 (381)
196 cd07876 STKc_JNK2 Catalytic do 100.0 2E-32 4.4E-37 264.3 10.6 223 179-413 77-315 (359)
197 PHA03211 serine/threonine kina 100.0 2E-32 4.3E-37 269.8 10.6 139 179-329 217-363 (461)
198 cd07875 STKc_JNK1 Catalytic do 100.0 1.7E-32 3.7E-37 265.3 9.8 224 179-413 80-318 (364)
199 cd05599 STKc_NDR_like Catalyti 100.0 1.2E-32 2.7E-37 266.3 8.8 192 179-413 58-296 (364)
200 cd05629 STKc_NDR_like_fungal C 100.0 9.6E-33 2.1E-37 268.3 8.1 140 179-330 58-250 (377)
201 cd05621 STKc_ROCK2 Catalytic d 100.0 1.3E-32 2.8E-37 266.1 8.9 192 179-413 100-304 (370)
202 cd08219 STKc_Nek3 Catalytic do 100.0 8E-33 1.7E-37 254.1 7.1 192 179-413 55-252 (255)
203 cd06646 STKc_MAP4K5 Catalytic 100.0 1.2E-32 2.6E-37 254.8 8.1 195 179-414 63-266 (267)
204 cd05083 PTKc_Chk Catalytic dom 100.0 3.9E-32 8.5E-37 249.4 11.3 194 179-416 56-253 (254)
205 cd05061 PTKc_InsR Catalytic do 100.0 2.7E-32 5.9E-37 255.3 10.2 198 179-417 66-278 (288)
206 cd05615 STKc_cPKC_alpha Cataly 100.0 2.1E-32 4.5E-37 260.2 9.5 182 180-407 59-246 (323)
207 cd05050 PTKc_Musk Catalytic do 100.0 1.8E-32 3.8E-37 256.5 8.9 197 179-416 65-288 (288)
208 cd06639 STKc_myosinIIIB Cataly 100.0 2.4E-32 5.3E-37 256.0 9.7 201 179-413 76-287 (291)
209 PHA03390 pk1 serine/threonine- 100.0 3.9E-32 8.4E-37 251.4 11.0 191 180-412 67-261 (267)
210 cd05057 PTKc_EGFR_like Catalyt 100.0 2.9E-32 6.3E-37 253.9 10.1 198 179-421 66-272 (279)
211 KOG0199 ACK and related non-re 100.0 6.4E-33 1.4E-37 266.6 5.8 193 179-415 168-370 (1039)
212 cd07872 STKc_PCTAIRE2 Catalyti 100.0 2.8E-32 6E-37 257.9 9.9 218 179-412 61-285 (309)
213 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 4.4E-32 9.6E-37 253.0 11.0 211 179-417 63-283 (284)
214 KOG0603 Ribosomal protein S6 k 100.0 3.7E-32 8.1E-37 260.9 10.5 187 179-413 373-563 (612)
215 cd06643 STKc_SLK Catalytic dom 100.0 3.6E-32 7.8E-37 253.7 10.1 193 179-413 59-262 (282)
216 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 5.5E-32 1.2E-36 248.9 11.2 190 179-415 58-259 (259)
217 cd08216 PK_STRAD Pseudokinase 100.0 7.7E-32 1.7E-36 255.4 12.4 220 179-413 56-295 (314)
218 cd06615 PKc_MEK Catalytic doma 100.0 3.5E-32 7.6E-37 257.0 9.9 222 179-413 56-287 (308)
219 cd05067 PTKc_Lck_Blk Catalytic 100.0 7E-32 1.5E-36 248.6 11.7 194 179-416 58-259 (260)
220 cd05625 STKc_LATS1 Catalytic d 100.0 2.1E-32 4.5E-37 266.4 8.4 141 179-331 58-251 (382)
221 cd05633 STKc_GRK3 Catalytic do 100.0 4.3E-32 9.2E-37 252.8 9.8 192 179-413 54-255 (279)
222 cd05630 STKc_GRK6 Catalytic do 100.0 4E-32 8.6E-37 253.8 9.4 195 179-413 57-261 (285)
223 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.4E-31 3.1E-36 248.9 13.2 189 179-413 59-253 (277)
224 KOG0596 Dual specificity; seri 100.0 1.7E-32 3.7E-37 257.9 6.9 195 176-413 414-627 (677)
225 cd08223 STKc_Nek4 Catalytic do 100.0 6.4E-32 1.4E-36 248.3 10.6 193 179-413 56-254 (257)
226 PTZ00284 protein kinase; Provi 100.0 5.9E-32 1.3E-36 269.7 11.1 141 179-331 188-348 (467)
227 cd06658 STKc_PAK5 Catalytic do 100.0 9E-32 2E-36 252.2 11.7 191 179-413 76-272 (292)
228 cd05034 PTKc_Src_like Catalyti 100.0 6.5E-32 1.4E-36 248.9 10.4 195 179-416 58-260 (261)
229 cd05598 STKc_LATS Catalytic do 100.0 1.4E-32 3.1E-37 267.0 6.3 141 179-331 58-247 (376)
230 cd06655 STKc_PAK2 Catalytic do 100.0 4E-32 8.6E-37 255.2 9.1 191 179-413 73-269 (296)
231 cd06613 STKc_MAP4K3_like Catal 100.0 8.4E-32 1.8E-36 248.1 11.1 194 179-412 57-259 (262)
232 cd07878 STKc_p38beta_MAPK11 Ca 100.0 8E-32 1.7E-36 258.5 11.2 223 179-413 71-298 (343)
233 PTZ00266 NIMA-related protein 100.0 3E-32 6.5E-37 281.7 8.8 198 179-412 69-294 (1021)
234 KOG0200 Fibroblast/platelet-de 100.0 9.6E-32 2.1E-36 273.7 12.2 200 179-418 359-580 (609)
235 cd08528 STKc_Nek10 Catalytic d 100.0 5.1E-32 1.1E-36 250.8 9.2 198 179-415 66-268 (269)
236 PRK13184 pknD serine/threonine 100.0 6.2E-32 1.3E-36 278.3 10.6 202 179-419 59-292 (932)
237 cd06628 STKc_MAPKKK_Byr2_like 100.0 8E-32 1.7E-36 249.1 10.3 189 179-412 63-263 (267)
238 cd06612 STKc_MST1_2 Catalytic 100.0 7.2E-32 1.6E-36 247.7 9.9 192 179-412 55-252 (256)
239 cd07867 STKc_CDC2L6 Catalytic 100.0 1.2E-31 2.7E-36 254.3 11.8 146 179-331 55-219 (317)
240 cd06619 PKc_MKK5 Catalytic dom 100.0 1.2E-31 2.7E-36 249.7 11.4 192 179-413 56-253 (279)
241 cd06624 STKc_ASK Catalytic dom 100.0 1.1E-31 2.4E-36 248.4 11.0 193 179-413 62-265 (268)
242 cd05041 PTKc_Fes_like Catalyti 100.0 1.4E-31 3E-36 245.3 11.4 193 179-415 49-250 (251)
243 cd06640 STKc_MST4 Catalytic do 100.0 2.9E-31 6.3E-36 246.9 13.6 189 179-413 59-253 (277)
244 cd05622 STKc_ROCK1 Catalytic d 100.0 5.3E-32 1.2E-36 262.0 8.9 193 179-414 100-305 (371)
245 cd06636 STKc_MAP4K4_6 Catalyti 100.0 7.2E-32 1.6E-36 251.6 9.3 197 179-412 70-278 (282)
246 cd05073 PTKc_Hck Catalytic dom 100.0 2.1E-31 4.6E-36 245.4 12.2 195 179-417 58-260 (260)
247 PHA02882 putative serine/threo 100.0 9.4E-32 2E-36 252.4 10.0 201 179-414 80-293 (294)
248 KOG0032 Ca2+/calmodulin-depend 100.0 8.8E-32 1.9E-36 256.6 9.9 190 181-413 95-293 (382)
249 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2.9E-31 6.2E-36 248.3 13.2 207 179-413 56-266 (287)
250 cd05046 PTK_CCK4 Pseudokinase 100.0 9.3E-32 2E-36 249.9 9.4 197 179-415 65-274 (275)
251 KOG0574 STE20-like serine/thre 100.0 1.1E-32 2.5E-37 241.3 3.0 193 179-413 85-283 (502)
252 cd07839 STKc_CDK5 Catalytic do 100.0 9.8E-32 2.1E-36 250.9 9.4 213 179-413 56-281 (284)
253 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.3E-31 2.7E-36 250.0 10.0 195 178-412 56-260 (283)
254 cd08221 STKc_Nek9 Catalytic do 100.0 1.7E-31 3.6E-36 245.4 10.5 193 179-414 56-254 (256)
255 cd05627 STKc_NDR2 Catalytic do 100.0 3.9E-32 8.4E-37 262.4 6.6 141 179-331 58-239 (360)
256 cd08217 STKc_Nek2 Catalytic do 100.0 1.9E-31 4.1E-36 245.9 10.9 199 179-413 56-262 (265)
257 cd06608 STKc_myosinIII_like Ca 100.0 1.2E-31 2.5E-36 248.8 9.5 200 179-412 60-271 (275)
258 KOG0579 Ste20-like serine/thre 100.0 1.1E-31 2.4E-36 255.4 9.4 192 180-413 87-289 (1187)
259 cd06659 STKc_PAK6 Catalytic do 100.0 2.3E-31 5E-36 250.1 11.5 191 179-413 75-271 (297)
260 cd05112 PTKc_Itk Catalytic dom 100.0 1.7E-31 3.7E-36 245.3 10.4 192 179-414 56-255 (256)
261 cd06644 STKc_STK10_LOK Catalyt 100.0 1.7E-31 3.6E-36 250.5 10.5 192 179-412 66-268 (292)
262 cd06656 STKc_PAK3 Catalytic do 100.0 7.5E-32 1.6E-36 253.5 8.1 190 179-412 73-268 (297)
263 PF00069 Pkinase: Protein kina 100.0 1.5E-31 3.3E-36 246.1 9.9 195 179-412 55-256 (260)
264 cd06651 STKc_MEKK3 Catalytic d 100.0 1.3E-31 2.9E-36 247.6 9.5 191 179-412 61-260 (266)
265 KOG0983 Mitogen-activated prot 100.0 4.1E-32 8.9E-37 234.9 5.4 193 180-413 149-349 (391)
266 cd07861 STKc_CDK1_euk Catalyti 100.0 1.3E-31 2.7E-36 250.2 9.0 219 179-412 56-281 (285)
267 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.4E-31 3E-36 252.1 9.3 215 179-412 61-285 (301)
268 cd05632 STKc_GRK5 Catalytic do 100.0 2E-31 4.3E-36 249.1 10.2 195 179-413 57-261 (285)
269 cd06605 PKc_MAPKK Catalytic do 100.0 4.1E-31 8.8E-36 244.1 12.0 197 179-413 56-257 (265)
270 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.6E-31 3.6E-36 249.5 9.4 204 179-414 60-267 (284)
271 cd08226 PK_STRAD_beta Pseudoki 100.0 2.2E-31 4.8E-36 253.8 10.3 232 179-420 56-317 (328)
272 cd08220 STKc_Nek8 Catalytic do 100.0 2.2E-31 4.8E-36 244.5 9.9 192 179-413 56-253 (256)
273 cd05606 STKc_beta_ARK Catalyti 100.0 3.3E-31 7.2E-36 246.7 11.1 192 179-413 54-255 (278)
274 cd05609 STKc_MAST Catalytic do 100.0 1.6E-31 3.4E-36 252.2 8.9 194 179-415 58-272 (305)
275 cd06611 STKc_SLK_like Catalyti 100.0 2.3E-31 5.1E-36 247.9 9.9 193 179-413 59-262 (280)
276 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 8.9E-31 1.9E-35 244.7 13.7 197 179-413 56-262 (286)
277 cd06609 STKc_MST3_like Catalyt 100.0 4E-31 8.6E-36 245.5 11.2 190 179-413 56-251 (274)
278 KOG0671 LAMMER dual specificit 100.0 9.9E-32 2.2E-36 242.9 6.8 209 199-413 163-406 (415)
279 cd06631 STKc_YSK4 Catalytic do 100.0 2.1E-31 4.6E-36 246.1 9.1 191 179-412 59-261 (265)
280 smart00219 TyrKc Tyrosine kina 100.0 5.4E-31 1.2E-35 242.0 11.7 193 179-414 58-258 (258)
281 cd05611 STKc_Rim15_like Cataly 100.0 3.4E-31 7.4E-36 244.0 10.4 192 179-412 54-247 (260)
282 PHA03210 serine/threonine kina 100.0 2.4E-31 5.2E-36 266.6 10.0 224 179-413 220-454 (501)
283 cd08218 STKc_Nek1 Catalytic do 100.0 2.3E-31 5E-36 244.5 8.8 192 179-413 56-253 (256)
284 cd05623 STKc_MRCK_alpha Cataly 100.0 3.1E-31 6.7E-36 253.2 9.8 195 179-413 58-266 (332)
285 cd07847 STKc_CDKL1_4 Catalytic 100.0 5.2E-31 1.1E-35 246.1 10.9 217 179-412 57-282 (286)
286 KOG0577 Serine/threonine prote 100.0 1.1E-31 2.5E-36 253.7 6.3 192 179-414 83-279 (948)
287 cd05074 PTKc_Tyro3 Catalytic d 100.0 4.4E-31 9.5E-36 245.0 10.1 203 179-417 58-272 (273)
288 cd05597 STKc_DMPK_like Catalyt 100.0 5.2E-31 1.1E-35 251.5 10.3 141 179-330 58-210 (331)
289 cd06652 STKc_MEKK2 Catalytic d 100.0 5.6E-31 1.2E-35 243.3 10.2 192 179-413 61-261 (265)
290 cd05572 STKc_cGK_PKG Catalytic 100.0 7.1E-31 1.5E-35 242.1 10.8 192 179-412 50-251 (262)
291 cd06648 STKc_PAK_II Catalytic 100.0 1E-30 2.2E-35 244.3 11.9 190 179-412 73-268 (285)
292 cd05574 STKc_phototropin_like 100.0 5.3E-31 1.1E-35 249.9 9.4 192 179-412 58-288 (316)
293 cd07844 STKc_PCTAIRE_like Cata 100.0 7.4E-31 1.6E-35 245.9 10.2 141 179-331 60-207 (291)
294 cd06632 STKc_MEKK1_plant Catal 100.0 7.1E-31 1.5E-35 241.3 9.7 190 179-412 59-254 (258)
295 KOG4250 TANK binding protein k 100.0 1.5E-30 3.3E-35 252.0 12.3 233 179-420 68-313 (732)
296 cd07849 STKc_ERK1_2_like Catal 100.0 4.5E-31 9.8E-36 252.6 8.4 215 179-413 60-292 (336)
297 cd06647 STKc_PAK_I Catalytic d 100.0 9.5E-31 2.1E-35 245.5 10.3 191 179-413 73-269 (293)
298 cd07850 STKc_JNK Catalytic dom 100.0 1.9E-30 4E-35 250.0 12.6 224 179-413 72-311 (353)
299 cd05624 STKc_MRCK_beta Catalyt 100.0 7.2E-31 1.6E-35 250.5 9.5 141 179-330 58-210 (331)
300 cd06607 STKc_TAO Catalytic dom 100.0 8.3E-31 1.8E-35 247.6 9.8 191 179-413 72-267 (307)
301 cd06629 STKc_MAPKKK_Bck1_like 100.0 9.9E-31 2.1E-35 242.6 10.0 195 179-413 65-269 (272)
302 KOG0586 Serine/threonine prote 100.0 3.2E-31 7E-36 253.2 6.9 191 177-413 110-306 (596)
303 cd07833 STKc_CDKL Catalytic do 100.0 1.2E-30 2.6E-35 243.9 10.6 216 179-412 57-284 (288)
304 cd06630 STKc_MEKK1 Catalytic d 100.0 2.9E-30 6.3E-35 238.8 12.8 193 179-412 60-263 (268)
305 cd07841 STKc_CDK7 Catalytic do 100.0 1.9E-30 4E-35 244.0 11.5 217 179-413 59-282 (298)
306 cd07855 STKc_ERK5 Catalytic do 100.0 1.5E-30 3.2E-35 248.8 11.0 223 179-413 61-294 (334)
307 cd05576 STKc_RPK118_like Catal 100.0 9.1E-31 2E-35 237.9 8.8 179 180-408 43-224 (237)
308 cd07843 STKc_CDC2L1 Catalytic 100.0 1.1E-30 2.4E-35 245.0 9.5 222 179-412 61-289 (293)
309 cd06616 PKc_MKK4 Catalytic dom 100.0 1.6E-30 3.6E-35 243.2 10.6 199 179-413 60-267 (288)
310 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.2E-30 2.6E-35 243.8 9.5 218 179-413 57-283 (286)
311 cd07860 STKc_CDK2_3 Catalytic 100.0 1.5E-30 3.1E-35 243.0 10.1 218 179-412 56-280 (284)
312 cd05580 STKc_PKA Catalytic dom 100.0 1.8E-30 3.9E-35 243.2 10.6 188 179-412 58-253 (290)
313 cd07865 STKc_CDK9 Catalytic do 100.0 2.1E-30 4.6E-35 244.9 11.0 223 179-413 68-307 (310)
314 cd06917 STKc_NAK1_like Catalyt 100.0 2.3E-30 5E-35 240.8 11.0 190 179-413 59-255 (277)
315 cd07858 STKc_TEY_MAPK_plant Ca 100.0 2E-30 4.3E-35 248.2 10.6 225 179-417 61-297 (337)
316 KOG2052 Activin A type IB rece 100.0 2.5E-30 5.5E-35 237.8 10.8 220 172-419 255-505 (513)
317 cd05578 STKc_Yank1 Catalytic d 100.0 2.4E-30 5.2E-35 238.1 10.7 190 179-411 57-253 (258)
318 cd06623 PKc_MAPKK_plant_like C 100.0 1.8E-30 3.8E-35 239.5 9.8 193 179-413 56-256 (264)
319 cd06626 STKc_MEKK4 Catalytic d 100.0 2.9E-30 6.3E-35 238.1 11.2 192 179-412 56-260 (264)
320 cd07832 STKc_CCRK Catalytic do 100.0 2.5E-30 5.3E-35 241.6 10.7 216 179-413 56-282 (286)
321 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.5E-30 3.2E-35 243.9 9.2 220 179-412 60-287 (291)
322 cd07837 STKc_CdkB_plant Cataly 100.0 1.6E-30 3.4E-35 244.1 9.3 223 180-412 59-290 (295)
323 cd07838 STKc_CDK4_6_like Catal 100.0 5.9E-30 1.3E-34 239.1 13.1 220 179-412 58-283 (287)
324 cd05577 STKc_GRK Catalytic dom 100.0 1.3E-30 2.8E-35 242.5 8.6 194 179-412 50-253 (277)
325 cd06657 STKc_PAK4 Catalytic do 100.0 4.1E-30 8.9E-35 241.0 11.8 191 179-413 74-270 (292)
326 cd07831 STKc_MOK Catalytic dom 100.0 2.8E-30 6.1E-35 240.7 10.7 219 179-413 55-279 (282)
327 cd08530 STKc_CNK2-like Catalyt 100.0 2.5E-30 5.4E-35 237.4 10.2 194 179-413 56-253 (256)
328 cd08225 STKc_Nek5 Catalytic do 100.0 4.5E-30 9.7E-35 235.9 11.8 192 179-413 56-254 (257)
329 cd07842 STKc_CDK8_like Catalyt 100.0 1.5E-30 3.3E-35 246.6 8.8 146 179-331 59-219 (316)
330 KOG1025 Epidermal growth facto 100.0 6.3E-31 1.4E-35 257.0 6.2 199 179-422 755-962 (1177)
331 cd06614 STKc_PAK Catalytic dom 100.0 2.8E-30 6.1E-35 241.4 10.3 193 179-413 72-270 (286)
332 cd06635 STKc_TAO1 Catalytic do 100.0 3.5E-30 7.6E-35 244.4 11.0 193 179-415 82-279 (317)
333 KOG0986 G protein-coupled rece 100.0 1.7E-30 3.7E-35 239.1 8.4 188 180-407 243-435 (591)
334 cd08222 STKc_Nek11 Catalytic d 100.0 4.2E-30 9.1E-35 236.7 10.9 193 179-413 59-257 (260)
335 cd06641 STKc_MST3 Catalytic do 100.0 4.2E-30 9.1E-35 239.1 10.7 189 179-413 59-253 (277)
336 cd06618 PKc_MKK7 Catalytic dom 100.0 2.9E-30 6.2E-35 242.6 9.4 194 179-413 71-273 (296)
337 KOG1024 Receptor-like protein 100.0 3.5E-30 7.6E-35 233.0 9.4 207 179-425 344-563 (563)
338 cd06610 STKc_OSR1_SPAK Catalyt 100.0 4.7E-30 1E-34 237.1 10.5 198 179-413 56-264 (267)
339 cd07830 STKc_MAK_like Catalyti 100.0 9.6E-30 2.1E-34 237.3 12.5 218 180-413 56-280 (283)
340 KOG3653 Transforming growth fa 100.0 8.7E-30 1.9E-34 235.9 11.5 213 179-419 261-505 (534)
341 cd07845 STKc_CDK10 Catalytic d 100.0 7.3E-30 1.6E-34 241.4 11.2 220 179-413 63-290 (309)
342 cd05583 STKc_MSK_N N-terminal 100.0 6.6E-30 1.4E-34 239.1 10.3 196 179-416 62-266 (288)
343 cd05579 STKc_MAST_like Catalyt 100.0 5.4E-30 1.2E-34 236.2 9.5 190 179-414 50-255 (265)
344 cd06634 STKc_TAO2 Catalytic do 100.0 6.8E-30 1.5E-34 241.4 10.4 193 179-415 72-269 (308)
345 cd05118 STKc_CMGC Catalytic do 100.0 1.3E-29 2.7E-34 236.4 12.0 218 179-412 55-279 (283)
346 KOG0607 MAP kinase-interacting 100.0 8E-30 1.7E-34 225.2 9.6 202 179-412 133-360 (463)
347 cd07834 STKc_MAPK Catalytic do 100.0 1.1E-29 2.4E-34 242.3 11.0 229 179-418 56-296 (330)
348 cd08215 STKc_Nek Catalytic dom 100.0 7.4E-30 1.6E-34 234.2 9.3 194 179-413 56-255 (258)
349 cd07835 STKc_CDK1_like Catalyt 100.0 7.9E-30 1.7E-34 237.9 9.4 218 179-412 55-279 (283)
350 smart00750 KIND kinase non-cat 100.0 4.3E-29 9.4E-34 216.1 13.1 169 212-420 1-172 (176)
351 cd07852 STKc_MAPK15 Catalytic 100.0 1.3E-29 2.8E-34 242.6 10.4 218 180-413 65-295 (337)
352 KOG0690 Serine/threonine prote 100.0 1.1E-29 2.5E-34 224.7 8.9 181 179-405 225-411 (516)
353 cd07857 STKc_MPK1 Catalytic do 100.0 1.5E-29 3.2E-34 241.6 10.2 222 179-413 59-292 (332)
354 cd06633 STKc_TAO3 Catalytic do 100.0 1.8E-29 3.9E-34 239.0 10.5 191 179-413 78-273 (313)
355 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.4E-29 3E-34 233.9 9.5 192 179-413 61-261 (264)
356 cd07840 STKc_CDK9_like Catalyt 100.0 2.3E-29 5E-34 235.0 10.8 219 179-413 55-284 (287)
357 cd05122 PKc_STE Catalytic doma 100.0 1.6E-29 3.5E-34 231.0 9.4 193 179-413 54-251 (253)
358 cd07836 STKc_Pho85 Catalytic d 100.0 2.2E-29 4.7E-34 235.0 9.8 216 179-412 55-280 (284)
359 PLN00181 protein SPA1-RELATED; 100.0 2.8E-29 6.1E-34 265.4 11.8 204 168-413 18-265 (793)
360 cd06606 STKc_MAPKKK Catalytic 100.0 2.1E-29 4.6E-34 231.2 9.4 194 179-413 56-257 (260)
361 cd07864 STKc_CDK12 Catalytic d 100.0 6.1E-29 1.3E-33 234.2 12.3 220 179-412 63-298 (302)
362 PLN00009 cyclin-dependent kina 100.0 3.1E-29 6.7E-34 235.3 9.9 216 179-413 58-284 (294)
363 KOG0666 Cyclin C-dependent kin 100.0 2E-29 4.2E-34 222.0 7.9 145 179-331 84-243 (438)
364 cd06627 STKc_Cdc7_like Catalyt 100.0 2.7E-29 5.8E-34 230.2 9.3 189 179-412 56-250 (254)
365 KOG0669 Cyclin T-dependent kin 100.0 3.6E-29 7.8E-34 214.4 8.9 222 178-413 72-315 (376)
366 cd07851 STKc_p38 Catalytic dom 100.0 3.1E-29 6.7E-34 240.5 9.6 221 179-413 71-298 (343)
367 cd05613 STKc_MSK1_N N-terminal 100.0 4.1E-29 8.9E-34 234.0 9.9 192 180-413 63-268 (290)
368 cd05581 STKc_PDK1 Catalytic do 100.0 3.4E-29 7.4E-34 233.0 9.2 187 180-412 60-276 (280)
369 KOG0614 cGMP-dependent protein 100.0 1.6E-29 3.5E-34 235.5 6.6 184 179-406 477-665 (732)
370 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 4.2E-29 9.1E-34 238.0 9.5 219 179-413 66-288 (328)
371 cd07879 STKc_p38delta_MAPK13 C 100.0 4.8E-29 1E-33 239.1 9.9 222 179-418 71-304 (342)
372 PTZ00024 cyclin-dependent prot 100.0 5.8E-29 1.3E-33 237.9 10.3 212 179-412 77-312 (335)
373 KOG1006 Mitogen-activated prot 100.0 1.3E-30 2.8E-35 224.8 -1.0 198 180-412 121-326 (361)
374 cd05123 STKc_AGC Catalytic dom 100.0 6.9E-29 1.5E-33 227.0 10.4 185 179-409 50-240 (250)
375 cd07854 STKc_MAPK4_6 Catalytic 100.0 5.5E-29 1.2E-33 238.7 9.5 221 179-412 59-299 (342)
376 cd07829 STKc_CDK_like Catalyti 100.0 1.7E-28 3.6E-33 228.6 12.1 214 179-412 55-278 (282)
377 cd07866 STKc_BUR1 Catalytic do 100.0 1.7E-28 3.8E-33 231.9 11.5 221 179-412 64-307 (311)
378 KOG0696 Serine/threonine prote 100.0 1.3E-28 2.7E-33 224.4 9.5 179 181-405 409-593 (683)
379 KOG0587 Traf2- and Nck-interac 100.0 1E-28 2.2E-33 243.9 9.0 199 179-413 73-282 (953)
380 KOG0665 Jun-N-terminal kinase 100.0 2.8E-29 6.2E-34 222.0 4.5 221 179-413 72-310 (369)
381 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.2E-28 2.7E-33 236.3 9.2 220 179-412 71-297 (343)
382 cd07877 STKc_p38alpha_MAPK14 C 100.0 2.1E-28 4.5E-33 234.9 10.3 219 179-413 73-300 (345)
383 KOG0984 Mitogen-activated prot 100.0 4.8E-29 1E-33 207.7 4.8 167 167-342 91-266 (282)
384 KOG0664 Nemo-like MAPK-related 100.0 1.6E-29 3.5E-34 218.9 1.9 229 177-415 107-345 (449)
385 KOG1027 Serine/threonine prote 99.9 3.7E-29 8E-34 245.8 3.3 192 179-412 560-766 (903)
386 KOG1151 Tousled-like protein k 99.9 3.5E-28 7.7E-33 223.2 8.7 197 179-412 524-740 (775)
387 KOG1035 eIF-2alpha kinase GCN2 99.9 2.2E-28 4.7E-33 248.8 7.7 174 201-412 670-870 (1351)
388 KOG0668 Casein kinase II, alph 99.9 3E-28 6.6E-33 205.9 5.9 220 178-413 89-322 (338)
389 smart00220 S_TKc Serine/Threon 99.9 1.3E-27 2.8E-32 216.9 10.2 192 179-412 44-240 (244)
390 KOG0695 Serine/threonine prote 99.9 2.8E-27 6.1E-32 210.4 11.8 140 179-330 308-453 (593)
391 KOG0612 Rho-associated, coiled 99.9 6.3E-28 1.4E-32 243.7 8.5 137 182-330 135-283 (1317)
392 PLN03225 Serine/threonine-prot 99.9 9.9E-28 2.1E-32 242.1 9.9 197 198-413 206-450 (566)
393 cd05610 STKc_MASTL Catalytic d 99.9 5.5E-28 1.2E-32 249.7 8.2 93 178-282 60-152 (669)
394 KOG0662 Cyclin-dependent kinas 99.9 6.6E-28 1.4E-32 196.7 6.5 211 179-413 58-283 (292)
395 KOG0608 Warts/lats-like serine 99.9 2.5E-27 5.4E-32 226.0 8.2 143 180-334 687-877 (1034)
396 KOG1290 Serine/threonine prote 99.9 4.8E-27 1E-31 218.3 8.3 226 181-412 141-549 (590)
397 KOG4236 Serine/threonine prote 99.9 3.6E-28 7.8E-33 227.4 0.3 191 179-412 620-818 (888)
398 KOG0670 U4/U6-associated splic 99.9 8.2E-27 1.8E-31 218.1 4.9 222 182-413 494-746 (752)
399 KOG1345 Serine/threonine kinas 99.9 7.5E-26 1.6E-30 196.0 8.5 199 177-415 76-286 (378)
400 PLN03224 probable serine/threo 99.9 1.2E-24 2.6E-29 214.6 10.9 209 181-413 236-500 (507)
401 KOG1152 Signal transduction se 99.9 1.7E-25 3.8E-30 211.7 4.7 139 180-330 627-771 (772)
402 KOG1167 Serine/threonine prote 99.9 4.3E-24 9.4E-29 196.0 6.9 220 179-413 92-381 (418)
403 PLN00113 leucine-rich repeat r 99.9 1.7E-23 3.6E-28 227.1 10.3 176 2-178 145-320 (968)
404 KOG0590 Checkpoint kinase and 99.9 6.4E-24 1.4E-28 213.9 5.4 196 179-412 378-584 (601)
405 cd00180 PKc Catalytic domain o 99.9 6.1E-23 1.3E-27 181.7 10.0 159 179-413 48-214 (215)
406 KOG0576 Mitogen-activated prot 99.9 1.9E-23 4E-28 201.1 7.1 193 179-412 69-270 (829)
407 KOG0195 Integrin-linked kinase 99.9 1.6E-22 3.5E-27 175.5 6.6 200 178-418 243-447 (448)
408 KOG1023 Natriuretic peptide re 99.9 2.4E-21 5.2E-26 186.7 11.2 205 179-419 4-226 (484)
409 smart00221 STYKc Protein kinas 99.8 2.7E-21 5.7E-26 173.5 9.0 140 180-330 55-202 (225)
410 KOG0617 Ras suppressor protein 99.8 9.3E-23 2E-27 165.5 -2.0 168 16-189 28-196 (264)
411 KOG4158 BRPK/PTEN-induced prot 99.8 1.9E-20 4.1E-25 170.8 9.9 198 177-415 271-512 (598)
412 KOG0617 Ras suppressor protein 99.8 1.8E-22 3.9E-27 163.8 -3.5 158 2-166 38-196 (264)
413 KOG0444 Cytoskeletal regulator 99.8 9.1E-22 2E-26 188.3 -3.7 163 38-207 215-378 (1255)
414 KOG0444 Cytoskeletal regulator 99.8 4.8E-20 1.1E-24 176.6 -1.2 176 3-184 84-286 (1255)
415 KOG4194 Membrane glycoprotein 99.8 2.1E-19 4.6E-24 171.0 1.9 201 2-205 178-381 (873)
416 KOG0472 Leucine-rich repeat pr 99.7 2.6E-20 5.5E-25 170.0 -4.6 233 2-249 73-330 (565)
417 KOG0472 Leucine-rich repeat pr 99.7 3E-20 6.5E-25 169.6 -5.1 167 2-178 142-309 (565)
418 KOG1240 Protein kinase contain 99.7 1.5E-18 3.3E-23 175.9 6.1 192 176-415 75-293 (1431)
419 KOG0603 Ribosomal protein S6 k 99.7 1.1E-18 2.3E-23 168.7 4.5 137 180-330 55-193 (612)
420 KOG1033 eIF-2alpha kinase PEK/ 99.7 5.7E-19 1.2E-23 167.4 2.3 121 201-328 330-463 (516)
421 COG0515 SPS1 Serine/threonine 99.7 2.1E-17 4.5E-22 156.5 11.3 202 180-413 55-275 (384)
422 KOG4194 Membrane glycoprotein 99.7 5.6E-19 1.2E-23 168.2 -0.0 176 2-178 250-428 (873)
423 PF14531 Kinase-like: Kinase-l 99.7 2.1E-17 4.5E-22 150.3 4.4 160 203-404 115-288 (288)
424 KOG0532 Leucine-rich repeat (L 99.7 7.7E-19 1.7E-23 166.9 -5.1 178 2-189 80-257 (722)
425 KOG1164 Casein kinase (serine/ 99.7 6.6E-16 1.4E-20 146.5 13.4 187 199-420 93-300 (322)
426 PRK09188 serine/threonine prot 99.6 2.3E-16 4.9E-21 149.7 7.3 112 179-312 78-210 (365)
427 KOG0606 Microtubule-associated 99.6 1.6E-16 3.4E-21 161.3 2.8 131 241-405 153-304 (1205)
428 KOG1165 Casein kinase (serine/ 99.6 2.8E-15 6E-20 134.3 10.4 202 181-420 83-302 (449)
429 KOG1163 Casein kinase (serine/ 99.6 1.5E-15 3.3E-20 130.3 6.9 188 198-420 82-287 (341)
430 PRK12274 serine/threonine prot 99.6 1.6E-15 3.4E-20 131.2 6.9 128 180-330 60-209 (218)
431 PRK15370 E3 ubiquitin-protein 99.6 4.1E-15 8.8E-20 153.3 9.1 162 1-182 203-383 (754)
432 PRK15370 E3 ubiquitin-protein 99.6 3.9E-15 8.6E-20 153.4 8.9 158 1-180 182-339 (754)
433 PRK10359 lipopolysaccharide co 99.6 5.7E-16 1.2E-20 136.8 2.3 121 179-321 92-215 (232)
434 PRK15387 E3 ubiquitin-protein 99.6 9.9E-15 2.1E-19 149.7 9.6 74 97-179 385-458 (788)
435 KOG0618 Serine/threonine phosp 99.5 1.5E-16 3.2E-21 159.2 -4.1 199 1-207 245-470 (1081)
436 PRK15387 E3 ubiquitin-protein 99.5 2.4E-14 5.2E-19 146.9 11.7 164 2-184 206-420 (788)
437 PLN03210 Resistant to P. syrin 99.5 7.7E-14 1.7E-18 152.9 12.4 170 2-176 616-835 (1153)
438 KOG0590 Checkpoint kinase and 99.5 3.3E-15 7.2E-20 151.0 1.3 194 180-412 79-285 (601)
439 KOG1266 Protein kinase [Signal 99.5 2.9E-14 6.4E-19 127.7 6.9 147 179-326 124-280 (458)
440 cd05147 RIO1_euk RIO kinase fa 99.5 3E-14 6.5E-19 124.2 6.0 76 202-285 92-168 (190)
441 PLN03150 hypothetical protein; 99.5 3.4E-14 7.5E-19 145.5 7.3 113 22-135 419-532 (623)
442 KOG0532 Leucine-rich repeat (L 99.5 1.4E-15 3.1E-20 144.9 -2.6 152 2-163 103-254 (722)
443 KOG4237 Extracellular matrix p 99.5 7.7E-16 1.7E-20 140.7 -4.3 125 2-129 72-199 (498)
444 KOG0618 Serine/threonine phosp 99.5 1.7E-15 3.6E-20 151.8 -3.0 170 2-178 292-488 (1081)
445 COG4886 Leucine-rich repeat (L 99.5 2.1E-14 4.6E-19 140.4 4.6 174 2-184 121-295 (394)
446 cd00116 LRR_RI Leucine-rich re 99.5 3.8E-15 8.3E-20 141.3 -2.8 177 2-179 56-263 (319)
447 cd05145 RIO1_like RIO kinase f 99.5 9.2E-14 2E-18 121.5 6.2 77 202-286 92-169 (190)
448 PLN03210 Resistant to P. syrin 99.4 7E-13 1.5E-17 145.4 14.3 148 2-153 639-836 (1153)
449 KOG1166 Mitotic checkpoint ser 99.4 5.1E-13 1.1E-17 138.3 10.3 122 199-327 766-902 (974)
450 PLN03150 hypothetical protein; 99.4 2.1E-13 4.6E-18 139.8 7.0 110 46-156 419-529 (623)
451 cd00116 LRR_RI Leucine-rich re 99.4 1E-14 2.3E-19 138.3 -3.5 179 1-180 27-235 (319)
452 PRK10345 hypothetical protein; 99.4 2.4E-13 5.2E-18 119.7 4.7 92 179-281 58-156 (210)
453 COG4886 Leucine-rich repeat (L 99.3 1.2E-12 2.6E-17 128.0 4.4 174 2-183 98-272 (394)
454 smart00090 RIO RIO-like kinase 99.3 5.2E-12 1.1E-16 113.9 6.7 76 202-285 123-199 (237)
455 KOG1259 Nischarin, modulator o 99.3 2.7E-13 5.8E-18 120.1 -2.1 140 10-157 273-414 (490)
456 PF14580 LRR_9: Leucine-rich r 99.3 3.7E-12 8E-17 108.0 4.3 124 17-148 15-146 (175)
457 PF14580 LRR_9: Leucine-rich r 99.3 2.4E-12 5.2E-17 109.1 3.0 118 1-125 23-147 (175)
458 KOG4237 Extracellular matrix p 99.2 2E-13 4.4E-18 125.1 -4.3 175 2-179 96-335 (498)
459 KOG1259 Nischarin, modulator o 99.2 3.7E-12 8E-17 113.0 -0.3 127 1-136 288-416 (490)
460 TIGR03724 arch_bud32 Kae1-asso 99.2 2.4E-11 5.3E-16 107.0 4.6 69 200-283 70-138 (199)
461 cd05144 RIO2_C RIO kinase fami 99.2 4.7E-11 1E-15 105.1 5.9 73 201-286 105-177 (198)
462 PRK09605 bifunctional UGMP fam 99.2 2.6E-11 5.6E-16 123.0 4.9 85 179-284 393-477 (535)
463 PRK14879 serine/threonine prot 99.2 3.5E-11 7.5E-16 107.1 5.1 72 200-283 72-143 (211)
464 PRK01723 3-deoxy-D-manno-octul 99.1 5.9E-11 1.3E-15 107.2 5.2 71 202-284 121-192 (239)
465 KOG0606 Microtubule-associated 99.1 5.9E-11 1.3E-15 121.4 4.6 139 181-331 863-1038(1205)
466 KOG0601 Cyclin-dependent kinas 99.1 2E-10 4.4E-15 111.7 6.1 152 165-330 162-329 (524)
467 PF13855 LRR_8: Leucine rich r 99.0 3.4E-10 7.3E-15 79.1 4.3 60 21-81 1-61 (61)
468 cd05119 RIO RIO kinase family, 99.0 4.2E-10 9.1E-15 98.0 5.7 75 201-285 89-165 (187)
469 cd05120 APH_ChoK_like Aminogly 99.0 6.1E-10 1.3E-14 93.0 5.9 73 200-283 66-138 (155)
470 COG4248 Uncharacterized protei 99.0 8.7E-09 1.9E-13 96.2 12.6 181 226-423 112-306 (637)
471 KOG2137 Protein kinase [Signal 98.9 4.6E-10 9.9E-15 110.8 1.7 144 236-411 104-263 (700)
472 KOG0601 Cyclin-dependent kinas 98.9 1.2E-09 2.6E-14 106.4 4.3 191 179-418 323-519 (524)
473 KOG1243 Protein kinase [Genera 98.9 1E-08 2.3E-13 101.0 10.3 132 177-326 64-201 (690)
474 PF13855 LRR_8: Leucine rich r 98.8 3.3E-09 7.1E-14 74.0 3.6 60 45-106 1-61 (61)
475 KOG0531 Protein phosphatase 1, 98.8 7.4E-10 1.6E-14 108.8 0.3 144 2-155 77-221 (414)
476 KOG4579 Leucine-rich repeat (L 98.8 2E-10 4.3E-15 90.6 -4.6 101 2-107 32-136 (177)
477 cd05146 RIO3_euk RIO kinase fa 98.7 1.6E-08 3.5E-13 87.6 6.2 76 201-285 98-175 (197)
478 KOG3207 Beta-tubulin folding c 98.7 2.2E-09 4.9E-14 100.1 0.6 161 16-178 141-313 (505)
479 KOG0531 Protein phosphatase 1, 98.7 2.2E-09 4.9E-14 105.4 -0.5 151 18-178 69-220 (414)
480 TIGR01982 UbiB 2-polyprenylphe 98.6 2.7E-08 5.8E-13 97.9 5.3 77 201-286 232-309 (437)
481 KOG1859 Leucine-rich repeat pr 98.6 6.5E-10 1.4E-14 109.6 -6.4 125 22-154 165-291 (1096)
482 KOG4579 Leucine-rich repeat (L 98.6 3E-09 6.5E-14 84.0 -2.0 107 2-113 58-165 (177)
483 KOG3207 Beta-tubulin folding c 98.6 7.5E-09 1.6E-13 96.7 -1.1 153 2-156 151-315 (505)
484 cd05151 ChoK Choline Kinase (C 98.5 1.9E-07 4.1E-12 79.8 6.0 66 202-283 66-136 (170)
485 PRK15123 lipopolysaccharide co 98.5 1.9E-07 4.1E-12 85.5 5.0 78 201-283 109-194 (268)
486 COG3642 Mn2+-dependent serine/ 98.4 2.6E-07 5.7E-12 77.6 5.3 69 200-283 72-140 (204)
487 PF12799 LRR_4: Leucine Rich r 98.4 1.4E-07 3E-12 60.5 2.5 36 22-58 2-37 (44)
488 KOG4658 Apoptotic ATPase [Sign 98.4 8.3E-08 1.8E-12 101.3 1.5 102 22-126 546-650 (889)
489 PRK04750 ubiB putative ubiquin 98.4 2.1E-07 4.5E-12 93.0 3.9 78 200-287 234-317 (537)
490 KOG1859 Leucine-rich repeat pr 98.4 5E-09 1.1E-13 103.5 -7.4 121 3-131 170-292 (1096)
491 PF12799 LRR_4: Leucine Rich r 98.3 2.9E-07 6.4E-12 59.0 2.1 37 45-82 1-37 (44)
492 PF01163 RIO1: RIO1 family; I 98.3 8.6E-07 1.9E-11 76.5 5.3 75 201-285 80-157 (188)
493 PF06293 Kdo: Lipopolysacchari 98.3 6.7E-07 1.5E-11 79.0 4.8 77 201-284 91-171 (206)
494 KOG3087 Serine/threonine prote 98.3 1E-06 2.2E-11 73.9 4.5 80 199-283 82-165 (229)
495 KOG1909 Ran GTPase-activating 98.3 3.3E-08 7.2E-13 90.0 -4.8 161 17-178 88-282 (382)
496 KOG1644 U2-associated snRNP A' 98.2 2.3E-06 5E-11 72.5 4.9 121 2-152 24-150 (233)
497 KOG4658 Apoptotic ATPase [Sign 98.2 1.2E-06 2.6E-11 92.7 3.4 132 17-153 519-653 (889)
498 PRK15386 type III secretion pr 98.1 4.5E-06 9.7E-11 79.7 6.7 117 18-152 49-187 (426)
499 KOG1909 Ran GTPase-activating 98.1 3.9E-07 8.4E-12 83.2 -0.8 186 1-190 34-264 (382)
500 KOG3741 Poly(A) ribonuclease s 98.1 3.3E-05 7.3E-10 74.6 11.4 133 179-326 330-474 (655)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=5e-57 Score=488.25 Aligned_cols=387 Identities=30% Similarity=0.526 Sum_probs=277.1
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccC
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNL 81 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~ 81 (427)
|||++|.++|.+|..+..+++|+.|+|++|++.+.+|..+ ..++|+.|++++|+++|.+|..+..+++|++|++++|++
T Consensus 433 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 511 (968)
T PLN00113 433 LDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKL 511 (968)
T ss_pred EECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcc
Confidence 3444444444444444445555555555555554444433 335666666677777777777777777777888888888
Q ss_pred cccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCCC
Q 042634 82 TGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSS 161 (427)
Q Consensus 82 ~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~~ 161 (427)
++.+|..+.++.+| +.|+|++|+++|.+|..+..+++|+.|+|++|+++|.+|..+.++.+|+.+++++|.+.+.+|..
T Consensus 512 ~~~~p~~~~~l~~L-~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~ 590 (968)
T PLN00113 512 SGEIPDELSSCKKL-VSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPST 590 (968)
T ss_pred eeeCChHHcCccCC-CEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCc
Confidence 77777777777777 56888888888888888888888888888888888888888888888888888888877655531
Q ss_pred c--cc-----------------------ccC--------------------------------------Cce--------
Q 042634 162 L--SS-----------------------LRG--------------------------------------IEN-------- 170 (427)
Q Consensus 162 l--~~-----------------------l~~--------------------------------------L~~-------- 170 (427)
- .. +.. .+.
T Consensus 591 ~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (968)
T PLN00113 591 GAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTPSWWFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDGTW 670 (968)
T ss_pred chhcccChhhhcCCccccCCccccCCCCCccccccceeeeehhHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccc
Confidence 0 00 000 000
Q ss_pred -ee------------------------ccCCc------------------------------------ccccccchhhhc
Q 042634 171 -LD------------------------LSRNN------------------------------------FIRHRNLVKIIT 189 (427)
Q Consensus 171 -L~------------------------L~~N~------------------------------------ll~Hpniv~~~~ 189 (427)
+. ++... -++|||||++++
T Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~l~~l~HpnIv~~~~ 750 (968)
T PLN00113 671 ELQFFDSKVSKSITINDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIADMGKLQHPNIVKLIG 750 (968)
T ss_pred cccccccccchhhhHHHHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccccHHHHHHHhhCCCCCcceEEE
Confidence 00 00000 057999999999
Q ss_pred cccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccccCCceeeCC
Q 042634 190 SCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDG 269 (427)
Q Consensus 190 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~ 269 (427)
+|.. ....++||||+++|+|.++++ .+++.++..++.|+|+|++|||+.++.+|+||||||+||+++.
T Consensus 751 ~~~~-----~~~~~lv~Ey~~~g~L~~~l~-------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~ 818 (968)
T PLN00113 751 LCRS-----EKGAYLIHEYIEGKNLSEVLR-------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDG 818 (968)
T ss_pred EEEc-----CCCCEEEEeCCCCCcHHHHHh-------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECC
Confidence 8754 456799999999999999984 2788999999999999999999766679999999999999999
Q ss_pred CCceEecccccccccC--CcCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhcc
Q 042634 270 ELTAHVGDFGLAKFLP--EATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEALP 347 (427)
Q Consensus 270 ~~~~kL~DFG~a~~~~--~~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~~~~~~~~~~~~~~ 347 (427)
++.+++. ||.+.... ....++..|+|||++.+..++.++|||||||++|||++|+.||+........+.++.+....
T Consensus 819 ~~~~~~~-~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 897 (968)
T PLN00113 819 KDEPHLR-LSLPGLLCTDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYS 897 (968)
T ss_pred CCceEEE-eccccccccCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcC
Confidence 8888775 66654432 22367889999999999999999999999999999999999997655555555555544332
Q ss_pred c-chhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 042634 348 E-RLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQLLSFRNK 420 (427)
Q Consensus 348 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~L~~~~~~ 420 (427)
. .....+|+.+... .....++..++.+++.+||+.||++||||+||+++|+++.+.
T Consensus 898 ~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~ 954 (968)
T PLN00113 898 DCHLDMWIDPSIRGD-----------------VSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRS 954 (968)
T ss_pred ccchhheeCccccCC-----------------CCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcc
Confidence 1 1222333322110 012344567889999999999999999999999999998763
No 2
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-43 Score=331.34 Aligned_cols=203 Identities=32% Similarity=0.463 Sum_probs=169.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCC-eee
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETP-IVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~-ivH 257 (427)
++|||||+++|+|.... ...++||||+++|+|.++++... ...+++..++.++.|||+||+||| +.+ |||
T Consensus 96 l~HpNIV~f~G~~~~~~----~~~~iVtEy~~~GsL~~~l~~~~--~~~l~~~~~l~~aldiArGm~YLH---~~~~iIH 166 (362)
T KOG0192|consen 96 LRHPNIVQFYGACTSPP----GSLCIVTEYMPGGSLSVLLHKKR--KRKLPLKVRLRIALDIARGMEYLH---SEGPIIH 166 (362)
T ss_pred CCCCCeeeEEEEEcCCC----CceEEEEEeCCCCcHHHHHhhcc--cCCCCHHHHHHHHHHHHHHHHHHh---cCCCeee
Confidence 78999999999987621 15799999999999999998741 256999999999999999999999 788 999
Q ss_pred ccccCCceeeCCCC-ceEecccccccccCCc------CCCccccccccccC--CCCcCccccchhHHHHHHHHHhCCCCC
Q 042634 258 CDLKPSNVLLDGEL-TAHVGDFGLAKFLPEA------TNNFFNFQIAEYGM--GSEVSTSGDVYSFGILLLETFTGKRPT 328 (427)
Q Consensus 258 rDlkp~NIll~~~~-~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~--~~~~~~~~DiwS~G~vl~ell~g~~pf 328 (427)
|||||+|||++.++ ++||+|||+++..... ..||..|||||++. ...|+.|+||||||+++|||+||+.||
T Consensus 167 rDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf 246 (362)
T KOG0192|consen 167 RDLKSDNILVDLKGKTLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPF 246 (362)
T ss_pred cccChhhEEEcCCCCEEEECCCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCC
Confidence 99999999999997 9999999999876532 38999999999999 568999999999999999999999999
Q ss_pred CcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 329 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
.+... .......+....+ ...+..|+..+..+|.+||+.||++||++.
T Consensus 247 ~~~~~-~~~~~~v~~~~~R-------------------------------p~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ 294 (362)
T KOG0192|consen 247 EDLAP-VQVASAVVVGGLR-------------------------------PPIPKECPPHLSSLMERCWLVDPSRRPSFL 294 (362)
T ss_pred CCCCH-HHHHHHHHhcCCC-------------------------------CCCCccCCHHHHHHHHHhCCCCCCcCCCHH
Confidence 87533 1111111111111 112344788899999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 042634 409 EVAAQLLSFRNKLV 422 (427)
Q Consensus 409 ev~~~L~~~~~~~~ 422 (427)
|++..|+.+...+.
T Consensus 295 ei~~~l~~~~~~~~ 308 (362)
T KOG0192|consen 295 EIVSRLESIMSHIS 308 (362)
T ss_pred HHHHHHHHHHHhhc
Confidence 99999999987654
No 3
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-43 Score=315.15 Aligned_cols=196 Identities=24% Similarity=0.309 Sum_probs=162.8
Q ss_pred cccccchhhhccccccCCCCCC-ccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 179 IRHRNLVKIITSCASVDFQGND-SEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
.+||+||++++.+.. +. ..+++||||++|||.+++... +++++...-+++.++++||.|||+ +++|||
T Consensus 134 ~~spyIV~~ygaF~~-----~~~~isI~mEYMDgGSLd~~~k~~----g~i~E~~L~~ia~~VL~GL~YLh~--~~~IIH 202 (364)
T KOG0581|consen 134 CQSPYIVGFYGAFYS-----NGEEISICMEYMDGGSLDDILKRV----GRIPEPVLGKIARAVLRGLSYLHE--ERKIIH 202 (364)
T ss_pred CCCCCeeeEeEEEEe-----CCceEEeehhhcCCCCHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhh--ccCeee
Confidence 479999999999644 44 589999999999999998765 459999999999999999999995 489999
Q ss_pred ccccCCceeeCCCCceEecccccccccCCcC----CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEAT----NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~DFG~a~~~~~~~----~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
|||||+|||++..|.+||||||+++.+.... +||..|||||.+.+..|+.++||||||++++|+++|+.||.....
T Consensus 203 RDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~ 282 (364)
T KOG0581|consen 203 RDIKPSNLLVNSKGEVKICDFGVSGILVNSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNP 282 (364)
T ss_pred ccCCHHHeeeccCCCEEeccccccHHhhhhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCC
Confidence 9999999999999999999999999875544 899999999999999999999999999999999999999986523
Q ss_pred CCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchH-HHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 334 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVK-ECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
....+.+.+.....+.- +. .+. .++.++.+++..|++.||.+|||+.|+++
T Consensus 283 ~~~~~~~Ll~~Iv~~pp---------------------------P~-lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 283 PYLDIFELLCAIVDEPP---------------------------PR-LPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred CCCCHHHHHHHHhcCCC---------------------------CC-CCcccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 33333333322221100 00 122 37788999999999999999999999987
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
+
T Consensus 335 H 335 (364)
T KOG0581|consen 335 H 335 (364)
T ss_pred C
Confidence 5
No 4
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7e-41 Score=318.46 Aligned_cols=216 Identities=38% Similarity=0.653 Sum_probs=181.4
Q ss_pred cccccchhhhccccccCCCCCC-ccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 179 IRHRNLVKIITSCASVDFQGND-SEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
++|||+|+++|+|.+ .. ..++|+|||++|+|.++++..... .++|..+++|+.++|+||+|||+.+...|+|
T Consensus 128 l~H~Nlv~LlGyC~e-----~~~~~~LVYEym~nGsL~d~L~~~~~~--~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiH 200 (361)
T KOG1187|consen 128 LRHPNLVKLLGYCLE-----GGEHRLLVYEYMPNGSLEDHLHGKKGE--PLDWETRLKIALGAARGLAYLHEGCPPPIIH 200 (361)
T ss_pred CCCcCcccEEEEEec-----CCceEEEEEEccCCCCHHHHhCCCCCC--CCCHHHHHHHHHHHHHHHHHHccCCCCCEec
Confidence 569999999999976 23 589999999999999999876532 7899999999999999999999866668999
Q ss_pred ccccCCceeeCCCCceEecccccccccCC-cC------CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPE-AT------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~DFG~a~~~~~-~~------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
|||||+|||+|+++.+||+|||+|+..+. .. .||.+|+|||+...+..+.|+|||||||++.|+++|+.+.+.
T Consensus 201 rDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~ 280 (361)
T KOG1187|consen 201 RDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQ 280 (361)
T ss_pred CCCCHHHeeECCCCCEEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCC
Confidence 99999999999999999999999987764 32 689999999999999999999999999999999999988875
Q ss_pred cc-CCCccHHHHHHHhcc-cchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 331 MF-TGNLTLHNFVKEALP-ERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 331 ~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
.. .+...+..|+...+. ..+.+++|+.+.... .....+..++..++.+|++.+|++||+|.
T Consensus 281 ~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~-----------------~~~~~~~~~~~~~a~~C~~~~~~~RP~m~ 343 (361)
T KOG1187|consen 281 SRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGE-----------------YPDEKEVKKLAELALRCLRPDPKERPTMS 343 (361)
T ss_pred CCCcccccHHHHHHHHHHCcchhheeCCCccCCC-----------------CChHHHHHHHHHHHHHHcCcCCCcCcCHH
Confidence 43 334446676655544 368888888765211 01125677799999999999999999999
Q ss_pred HHHHHHHHHH
Q 042634 409 EVAAQLLSFR 418 (427)
Q Consensus 409 ev~~~L~~~~ 418 (427)
||++.|+.+.
T Consensus 344 ~Vv~~L~~~~ 353 (361)
T KOG1187|consen 344 QVVKELEGIL 353 (361)
T ss_pred HHHHHHHhhc
Confidence 9999996654
No 5
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-41 Score=317.84 Aligned_cols=198 Identities=30% Similarity=0.474 Sum_probs=167.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|++||+++++|.. +...+||||||+.|+|.++++.... ..+...+.+.++.|||+|++||. ++++|||
T Consensus 258 L~H~~lV~l~gV~~~-----~~piyIVtE~m~~GsLl~yLr~~~~--~~l~~~~Ll~~a~qIaeGM~YLe---s~~~IHR 327 (468)
T KOG0197|consen 258 LRHEKLVKLYGVCTK-----QEPIYIVTEYMPKGSLLDYLRTREG--GLLNLPQLLDFAAQIAEGMAYLE---SKNYIHR 327 (468)
T ss_pred CcccCeEEEEEEEec-----CCceEEEEEecccCcHHHHhhhcCC--CccchHHHHHHHHHHHHHHHHHH---hCCccch
Confidence 789999999999866 3468999999999999999987333 56888999999999999999999 9999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC-------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT-------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~-------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~ 330 (427)
||.++||||+++..+||+|||+|+...++. .-+..|.|||.+....++.|||||||||+|||++| |+.||.+
T Consensus 328 DLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~ 407 (468)
T KOG0197|consen 328 DLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPG 407 (468)
T ss_pred hhhhhheeeccCceEEEcccccccccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCC
Confidence 999999999999999999999999654332 33457999999999999999999999999999999 9999876
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
+.. .+.+.. ++ ...+...|+.||.+++++|..||+.+|++||||+.+
T Consensus 408 msn-----~ev~~~---------le-------------------~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L 454 (468)
T KOG0197|consen 408 MSN-----EEVLEL---------LE-------------------RGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETL 454 (468)
T ss_pred CCH-----HHHHHH---------Hh-------------------ccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHH
Confidence 522 111111 11 112233677799999999999999999999999999
Q ss_pred HHHHHHHHH
Q 042634 411 AAQLLSFRN 419 (427)
Q Consensus 411 ~~~L~~~~~ 419 (427)
...|+++..
T Consensus 455 ~~~l~~~~~ 463 (468)
T KOG0197|consen 455 REVLEDFFT 463 (468)
T ss_pred HHHHHHhhh
Confidence 999988765
No 6
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1e-40 Score=289.33 Aligned_cols=202 Identities=20% Similarity=0.264 Sum_probs=163.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCC--ee
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETP--IV 256 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~--iv 256 (427)
++|||||++++.... .++...+||||||.+|||.++++......+.+++..+++++.|++.||.++|+.. .. |+
T Consensus 75 L~HpNIVqYy~~~f~---~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~-~r~~Vm 150 (375)
T KOG0591|consen 75 LNHPNIVQYYAHSFI---EDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKI-PRGTVM 150 (375)
T ss_pred cCCchHHHHHHHhhh---ccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccc-ccccee
Confidence 689999999984211 2234489999999999999999877766788999999999999999999999532 34 89
Q ss_pred eccccCCceeeCCCCceEecccccccccCCcC------CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 257 HCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 257 HrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
||||||.||+++.+|.+||+|||+++.+.... +||+.||+||.+.+.+|+.|+||||+||++|||+.-.+||.+
T Consensus 151 HRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g 230 (375)
T KOG0591|consen 151 HRDIKPANIFLTANGVVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYG 230 (375)
T ss_pred eccCcchheEEcCCCceeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccc
Confidence 99999999999999999999999999987765 899999999999999999999999999999999999999986
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
. .+.+...+.-..+. +..+....+.++.+++..|+..||+.||+...+
T Consensus 231 ~-----n~~~L~~KI~qgd~---------------------------~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~ 278 (375)
T KOG0591|consen 231 D-----NLLSLCKKIEQGDY---------------------------PPLPDEHYSTDLRELINMCIAVDPEQRPDTVPY 278 (375)
T ss_pred c-----cHHHHHHHHHcCCC---------------------------CCCcHHHhhhHHHHHHHHHccCCcccCCCcchH
Confidence 3 22222222111110 011335677889999999999999999986555
Q ss_pred HHHHHH
Q 042634 411 AAQLLS 416 (427)
Q Consensus 411 ~~~L~~ 416 (427)
+..+..
T Consensus 279 v~di~~ 284 (375)
T KOG0591|consen 279 VQDIQS 284 (375)
T ss_pred HHHHHH
Confidence 544443
No 7
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.2e-41 Score=307.61 Aligned_cols=194 Identities=24% Similarity=0.312 Sum_probs=159.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||||++.+.+.. ....|+||||++||+|++++-.+ +.+.+...+.+++|++.|+.||| +.||+||
T Consensus 233 L~HP~IV~~~d~f~~-----~ds~YmVlE~v~GGeLfd~vv~n----k~l~ed~~K~~f~Qll~avkYLH---~~GI~HR 300 (475)
T KOG0615|consen 233 LSHPNIVRIKDFFEV-----PDSSYMVLEYVEGGELFDKVVAN----KYLREDLGKLLFKQLLTAVKYLH---SQGIIHR 300 (475)
T ss_pred cCCCCEEEEeeeeec-----CCceEEEEEEecCccHHHHHHhc----cccccchhHHHHHHHHHHHHHHH---HcCcccc
Confidence 789999999998544 55679999999999999998766 44888889999999999999999 9999999
Q ss_pred cccCCceeeCCC---CceEecccccccccCCcC-----CCccccccccccCCCCc---CccccchhHHHHHHHHHhCCCC
Q 042634 259 DLKPSNVLLDGE---LTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGMGSEV---STSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 259 Dlkp~NIll~~~---~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~~~~~---~~~~DiwS~G~vl~ell~g~~p 327 (427)
||||+|||+..+ ..+||+|||+|+...+.. +||+.|.|||++.+..+ ..++||||+|||+|-+++|.+|
T Consensus 301 DiKPeNILl~~~~e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pP 380 (475)
T KOG0615|consen 301 DIKPENILLSNDAEDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPP 380 (475)
T ss_pred cCCcceEEeccCCcceEEEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCC
Confidence 999999999665 789999999999987554 99999999999987654 3478999999999999999999
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
|.+......-..+..+..+. ..+..+.+..++..+++.+||..||++|||+
T Consensus 381 FS~~~~~~sl~eQI~~G~y~-----------------------------f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~ 431 (475)
T KOG0615|consen 381 FSEEYTDPSLKEQILKGRYA-----------------------------FGPLQWDRISEEALDLINWMLVVDPENRPSA 431 (475)
T ss_pred cccccCCccHHHHHhcCccc-----------------------------ccChhhhhhhHHHHHHHHHhhEeCcccCcCH
Confidence 98753332122221111111 0112445678889999999999999999999
Q ss_pred HHHHHH
Q 042634 408 EEVAAQ 413 (427)
Q Consensus 408 ~ev~~~ 413 (427)
+|++++
T Consensus 432 ~eaL~h 437 (475)
T KOG0615|consen 432 DEALNH 437 (475)
T ss_pred HHHhcC
Confidence 999864
No 8
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.5e-41 Score=318.02 Aligned_cols=189 Identities=25% Similarity=0.328 Sum_probs=160.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||||++++. |++.+..|+|.|+|+.++|..+++.+ +.+++.+++.+++||+.||.||| +.+|+||
T Consensus 75 L~HpnIV~f~~~-----FEDs~nVYivLELC~~~sL~el~Krr----k~ltEpEary~l~QIv~GlkYLH---~~~IiHR 142 (592)
T KOG0575|consen 75 LKHPNIVQFYHF-----FEDSNNVYIVLELCHRGSLMELLKRR----KPLTEPEARYFLRQIVEGLKYLH---SLGIIHR 142 (592)
T ss_pred cCCCcEEeeeeE-----eecCCceEEEEEecCCccHHHHHHhc----CCCCcHHHHHHHHHHHHHHHHHH---hcCceec
Confidence 789999999998 55578999999999999999999844 67999999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
|||..|++++++.++||+|||+|..+... .+||+.|.|||++....++..+||||+||+||-|+.|++||+...
T Consensus 143 DLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~ 222 (592)
T KOG0575|consen 143 DLKLGNLFLNENMNVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT 222 (592)
T ss_pred ccchhheeecCcCcEEecccceeeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch
Confidence 99999999999999999999999988643 299999999999999999999999999999999999999998531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
+.+-... .-..++ ..|.....+..+|+.++|+.||.+|||+++|+.
T Consensus 223 -----vkety~~------------Ik~~~Y-----------------~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 223 -----VKETYNK------------IKLNEY-----------------SMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred -----HHHHHHH------------HHhcCc-----------------ccccccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 1111111 000000 023345667899999999999999999999986
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
+
T Consensus 269 h 269 (592)
T KOG0575|consen 269 H 269 (592)
T ss_pred C
Confidence 4
No 9
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-41 Score=313.77 Aligned_cols=216 Identities=21% Similarity=0.345 Sum_probs=179.9
Q ss_pred cccccCCceeeccCCcccccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHH
Q 042634 162 LSSLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVA 241 (427)
Q Consensus 162 l~~l~~L~~L~L~~N~ll~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~ 241 (427)
+...+.|..-++.+-.-++|||||.+.++|.. ..-+|||||||..|-|+.+|+.. ..++......+.++||
T Consensus 152 VKKV~elkETdIKHLRkLkH~NII~FkGVCtq-----sPcyCIiMEfCa~GqL~~VLka~----~~itp~llv~Wsk~IA 222 (904)
T KOG4721|consen 152 VKKVRELKETDIKHLRKLKHPNIITFKGVCTQ-----SPCYCIIMEFCAQGQLYEVLKAG----RPITPSLLVDWSKGIA 222 (904)
T ss_pred hHHHhhhhhhhHHHHHhccCcceeeEeeeecC-----CceeEEeeeccccccHHHHHhcc----CccCHHHHHHHHHHhh
Confidence 33444555555655566899999999999977 45789999999999999999877 4588889999999999
Q ss_pred HHHHHHhhcCCCCeeeccccCCceeeCCCCceEecccccccccCCcC-----CCccccccccccCCCCcCccccchhHHH
Q 042634 242 SALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGMGSEVSTSGDVYSFGI 316 (427)
Q Consensus 242 ~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~~~~~~~~~DiwS~G~ 316 (427)
.|+.||| .+.|||||||.-||||..+..+||+|||.++...+.. +||..|||||++...+.+.|+|||||||
T Consensus 223 ~GM~YLH---~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGV 299 (904)
T KOG4721|consen 223 GGMNYLH---LHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGV 299 (904)
T ss_pred hhhHHHH---HhhHhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHH
Confidence 9999999 8999999999999999999999999999999765432 8999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhc
Q 042634 317 LLLETFTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTC 396 (427)
Q Consensus 317 vl~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c 396 (427)
|||||+||..||.+.......+ .. ...-.....+..|++.|.-|++.|
T Consensus 300 VLWEmLT~EiPYkdVdssAIIw-----GV---------------------------GsNsL~LpvPstcP~GfklL~Kqc 347 (904)
T KOG4721|consen 300 VLWEMLTGEIPYKDVDSSAIIW-----GV---------------------------GSNSLHLPVPSTCPDGFKLLLKQC 347 (904)
T ss_pred HHHHHHhcCCCccccchheeEE-----ec---------------------------cCCcccccCcccCchHHHHHHHHH
Confidence 9999999999998643221110 00 000111226778999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHH
Q 042634 397 SSELPRERMNMEEVAAQLLSFRNKL 421 (427)
Q Consensus 397 l~~dP~~Rpt~~ev~~~L~~~~~~~ 421 (427)
|+..|..||+|.+|+.+|+-...++
T Consensus 348 w~sKpRNRPSFrqil~HldIa~pel 372 (904)
T KOG4721|consen 348 WNSKPRNRPSFRQILLHLDIASPEL 372 (904)
T ss_pred HhcCCCCCccHHHHHHHHhhcCHHH
Confidence 9999999999999999999876654
No 10
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-39 Score=298.95 Aligned_cols=218 Identities=15% Similarity=0.168 Sum_probs=161.4
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecc
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrD 259 (427)
.|||||++.+++.+ .....++||||| ..+|+++++.++ +.|++..++.|+.||++||+|+| .+|+.|||
T Consensus 67 ~hpniikL~Evi~d----~~~~L~fVfE~M-d~NLYqLmK~R~---r~fse~~irnim~QilqGL~hiH---k~GfFHRD 135 (538)
T KOG0661|consen 67 PHPNIIKLKEVIRD----NDRILYFVFEFM-DCNLYQLMKDRN---RLFSESDIRNIMYQILQGLAHIH---KHGFFHRD 135 (538)
T ss_pred CCCcchhhHHHhhc----cCceEeeeHHhh-hhhHHHHHhhcC---CcCCHHHHHHHHHHHHHHHHHHH---hcCccccc
Confidence 49999999998644 223889999999 779999998874 67999999999999999999999 99999999
Q ss_pred ccCCceeeCCCCceEecccccccccCCcC-----CCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 260 LKPSNVLLDGELTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 260 lkp~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
+||||||+.....+||+|||+||.+.... +.|.+|+|||++.. .-|+.++|+||+|||++|+++-++.|.+..+
T Consensus 136 lKPENiLi~~~~~iKiaDFGLARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE 215 (538)
T KOG0661|consen 136 LKPENILISGNDVIKIADFGLAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASE 215 (538)
T ss_pred CChhheEecccceeEecccccccccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcH
Confidence 99999999999999999999999887655 77889999999865 6689999999999999999999999987533
Q ss_pred CCccHHHHHHHhcccchhcccCccccccccccchhhhccccc-cccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 334 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQ-FTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
-+ .+.+...-...+......... ..........+.-++ ......+. ++.++.+++.+|++|||.+||||+|+++
T Consensus 216 ~D-qi~KIc~VLGtP~~~~~~eg~---~La~~mnf~~P~~~~~~l~~L~p~-~s~~~~~li~~ll~WDP~kRpTA~~al~ 290 (538)
T KOG0661|consen 216 ID-QIYKICEVLGTPDKDSWPEGY---NLASAMNFRFPQVKPSPLKDLLPN-ASSEAASLIERLLAWDPDKRPTASQALQ 290 (538)
T ss_pred HH-HHHHHHHHhCCCccccchhHH---HHHHHhccCCCcCCCCChHHhCcc-cCHHHHHHHHHHhcCCCccCccHHHHhc
Confidence 22 222222211111100000000 000000000000000 01112223 7788999999999999999999999987
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
+
T Consensus 291 ~ 291 (538)
T KOG0661|consen 291 H 291 (538)
T ss_pred C
Confidence 4
No 11
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-39 Score=293.88 Aligned_cols=141 Identities=30% Similarity=0.513 Sum_probs=129.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||||++++++.. .+..|+|||||.||||.+|++.+. .+++..++.++.|+|.||++|| +++||||
T Consensus 66 l~H~nIV~l~d~~~~-----~~~i~lVMEyC~gGDLs~yi~~~~----~l~e~t~r~Fm~QLA~alq~L~---~~~IiHR 133 (429)
T KOG0595|consen 66 LKHPNIVRLLDCIED-----DDFIYLVMEYCNGGDLSDYIRRRG----RLPEATARHFMQQLASALQFLH---ENNIIHR 133 (429)
T ss_pred cCCcceeeEEEEEec-----CCeEEEEEEeCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeeec
Confidence 569999999998654 568999999999999999998773 5999999999999999999999 9999999
Q ss_pred cccCCceeeCCC------CceEecccccccccCCcC-----CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCC
Q 042634 259 DLKPSNVLLDGE------LTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 259 Dlkp~NIll~~~------~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~p 327 (427)
||||+|||++.. -.+||+|||+|+.+..+. +|++.|||||+++...|+.|+|+||.|+|+|++++|+.|
T Consensus 134 DLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~P 213 (429)
T KOG0595|consen 134 DLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPP 213 (429)
T ss_pred cCCcceEEeccCCCCCCCceEEecccchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCC
Confidence 999999999764 579999999999987665 899999999999999999999999999999999999999
Q ss_pred CCcc
Q 042634 328 TNEM 331 (427)
Q Consensus 328 f~~~ 331 (427)
|+..
T Consensus 214 f~a~ 217 (429)
T KOG0595|consen 214 FDAE 217 (429)
T ss_pred cccc
Confidence 9853
No 12
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-38 Score=297.39 Aligned_cols=191 Identities=21% Similarity=0.306 Sum_probs=159.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+|+|||.+++.+.. .+..|+|||||+||+|.+.+.... +++.++..|++++++||+||| .+||+||
T Consensus 327 ~~H~NiVnfl~Sylv-----~deLWVVMEym~ggsLTDvVt~~~-----~~E~qIA~Icre~l~aL~fLH---~~gIiHr 393 (550)
T KOG0578|consen 327 LHHPNIVNFLDSYLV-----GDELWVVMEYMEGGSLTDVVTKTR-----MTEGQIAAICREILQGLKFLH---ARGIIHR 393 (550)
T ss_pred ccchHHHHHHHHhcc-----cceeEEEEeecCCCchhhhhhccc-----ccHHHHHHHHHHHHHHHHHHH---hcceeee
Confidence 679999999998654 467999999999999999987653 899999999999999999999 9999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
|||.+|||++.++.+||+|||++..+... .+||+.|||||+.....|++|+||||||++++||+-|.+||-..
T Consensus 394 DIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE- 472 (550)
T KOG0578|consen 394 DIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNE- 472 (550)
T ss_pred ccccceeEeccCCcEEEeeeeeeeccccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCC-
Confidence 99999999999999999999999876543 38999999999999999999999999999999999999998642
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
........+.....+.+. .++.....+.+++.+||+.||++|||+.|+++
T Consensus 473 -~PlrAlyLIa~ng~P~lk-----------------------------~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 473 -NPLRALYLIATNGTPKLK-----------------------------NPEKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred -ChHHHHHHHhhcCCCCcC-----------------------------CccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 111111122222221111 23445677999999999999999999999987
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
+
T Consensus 523 H 523 (550)
T KOG0578|consen 523 H 523 (550)
T ss_pred C
Confidence 5
No 13
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-38 Score=284.89 Aligned_cols=182 Identities=27% Similarity=0.342 Sum_probs=151.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+||.||+++.. |++....|+|+||+.||.|+.+|++. ..+++..++-++.+|+.||.||| +.|||||
T Consensus 82 v~hPFiv~l~ys-----FQt~~kLylVld~~~GGeLf~hL~~e----g~F~E~~arfYlaEi~lAL~~LH---~~gIiyR 149 (357)
T KOG0598|consen 82 IKHPFIVKLIYS-----FQTEEKLYLVLDYLNGGELFYHLQRE----GRFSEDRARFYLAEIVLALGYLH---SKGIIYR 149 (357)
T ss_pred CCCCcEeeeEEe-----cccCCeEEEEEeccCCccHHHHHHhc----CCcchhHHHHHHHHHHHHHHHHH---hCCeeec
Confidence 689999999877 67788999999999999999999866 45999999999999999999999 9999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+|||+|.+|+++|+|||+|+..-.. .+||+.|||||++.+.+|+.++|+||+||++|||++|.+||....
T Consensus 150 DlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~ 229 (357)
T KOG0598|consen 150 DLKPENILLDEQGHIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAED 229 (357)
T ss_pred cCCHHHeeecCCCcEEEeccccchhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCcc
Confidence 99999999999999999999999954222 289999999999999999999999999999999999999997631
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM 405 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp 405 (427)
..++........+ ...+.-.+.+..+++.+.++.||++|-
T Consensus 230 -----~~~~~~~I~~~k~----------------------------~~~p~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 230 -----VKKMYDKILKGKL----------------------------PLPPGYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred -----HHHHHHHHhcCcC----------------------------CCCCccCCHHHHHHHHHHhccCHHHhc
Confidence 1122222211110 001111345578899999999999995
No 14
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-38 Score=296.43 Aligned_cols=189 Identities=23% Similarity=0.341 Sum_probs=158.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
..||.||+++-. |++....|+|+||+++|+|.+++++. ..|++..++.++.||+.||+||| +.|||||
T Consensus 131 ~~hPgivkLy~T-----FQD~~sLYFvLe~A~nGdll~~i~K~----Gsfde~caR~YAAeIldAleylH---~~GIIHR 198 (604)
T KOG0592|consen 131 SGHPGIVKLYFT-----FQDEESLYFVLEYAPNGDLLDLIKKY----GSFDETCARFYAAEILDALEYLH---SNGIIHR 198 (604)
T ss_pred hCCCCeEEEEEE-----eecccceEEEEEecCCCcHHHHHHHh----CcchHHHHHHHHHHHHHHHHHHH---hcCceec
Confidence 489999999977 66688999999999999999999876 45999999999999999999999 9999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-------------------CCCccccccccccCCCCcCccccchhHHHHHH
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-------------------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLL 319 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-------------------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ 319 (427)
||||+|||+|+++++||+|||.|+.+... -+||..|.+||++.....++.+||||||||+|
T Consensus 199 DlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCily 278 (604)
T KOG0592|consen 199 DLKPENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILY 278 (604)
T ss_pred cCChhheeEcCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHH
Confidence 99999999999999999999999976321 17889999999999999999999999999999
Q ss_pred HHHhCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCC
Q 042634 320 ETFTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSE 399 (427)
Q Consensus 320 ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~ 399 (427)
.|+.|.+||.+.. +..+.+.+... . + . .++..++.+.+|+.+.|..
T Consensus 279 QmlaG~PPFra~N--eyliFqkI~~l-----------~----y------------~-----fp~~fp~~a~dLv~KLLv~ 324 (604)
T KOG0592|consen 279 QMLAGQPPFRAAN--EYLIFQKIQAL-----------D----Y------------E-----FPEGFPEDARDLIKKLLVR 324 (604)
T ss_pred HHhcCCCCCcccc--HHHHHHHHHHh-----------c----c------------c-----CCCCCCHHHHHHHHHHHcc
Confidence 9999999998641 11111111110 0 0 0 2233456688999999999
Q ss_pred CCCCCCCHHHHHHH
Q 042634 400 LPRERMNMEEVAAQ 413 (427)
Q Consensus 400 dP~~Rpt~~ev~~~ 413 (427)
||.+|+|..||-++
T Consensus 325 dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 325 DPSDRLTSQQIKAH 338 (604)
T ss_pred CccccccHHHHhhC
Confidence 99999999888764
No 15
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.6e-38 Score=313.87 Aligned_cols=201 Identities=26% Similarity=0.488 Sum_probs=168.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh------h----hhccCHHHHHHHHHHHHHHHHHHh
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE------A----LKNLNLLQRLSIAVDVASALDYLH 248 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------~----~~~l~~~~~~~~~~~i~~~L~~LH 248 (427)
++|||||+++|+|.. ++..++|+|||..|||.++|+.+.. . ..+++..+.+.|+.|||.|++||-
T Consensus 546 l~H~nIVrLlGVC~~-----~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs 620 (774)
T KOG1026|consen 546 LQHPNIVRLLGVCRE-----GDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLS 620 (774)
T ss_pred ccCCCeEEEEEEEcc-----CCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 789999999999977 6688999999999999999864321 0 234889999999999999999999
Q ss_pred hcCCCCeeeccccCCceeeCCCCceEecccccccccCCcC--------CCccccccccccCCCCcCccccchhHHHHHHH
Q 042634 249 HYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT--------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLE 320 (427)
Q Consensus 249 ~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~--------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~e 320 (427)
++.+|||||..+|+||+++..|||+|||+++...... --..+|||||.++-.+|+.++|||||||||||
T Consensus 621 ---~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWE 697 (774)
T KOG1026|consen 621 ---SHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWE 697 (774)
T ss_pred ---hCcccccchhhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhh
Confidence 8999999999999999999999999999999764433 33468999999999999999999999999999
Q ss_pred HHh-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCC
Q 042634 321 TFT-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSE 399 (427)
Q Consensus 321 ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~ 399 (427)
+++ |+.||.+....+ ..+.++. +++ ...++.||.++++||+.||+.
T Consensus 698 IFsyG~QPy~glSn~E--VIe~i~~---g~l----------------------------L~~Pe~CP~~vY~LM~~CW~~ 744 (774)
T KOG1026|consen 698 IFSYGKQPYYGLSNQE--VIECIRA---GQL----------------------------LSCPENCPTEVYSLMLECWNE 744 (774)
T ss_pred hhccccCcccccchHH--HHHHHHc---CCc----------------------------ccCCCCCCHHHHHHHHHHhhc
Confidence 998 999998763322 1111111 110 115778999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHH
Q 042634 400 LPRERMNMEEVAAQLLSFRNK 420 (427)
Q Consensus 400 dP~~Rpt~~ev~~~L~~~~~~ 420 (427)
+|++|||++||-..|+...+.
T Consensus 745 ~P~~RPsF~eI~~~L~~~~~~ 765 (774)
T KOG1026|consen 745 NPKRRPSFKEIHSRLQAWAQA 765 (774)
T ss_pred CcccCCCHHHHHHHHHHHHhc
Confidence 999999999999999988654
No 16
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2e-38 Score=290.78 Aligned_cols=198 Identities=26% Similarity=0.369 Sum_probs=154.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||||+.++...... +...++.|||+++|+|.+++..... .+++..++.+++||++||+||| ++|||||
T Consensus 71 l~~p~IV~~~G~~~~~~---~~~~~i~mEy~~~GsL~~~~~~~g~---~l~E~~v~~ytr~iL~GL~ylH---s~g~vH~ 141 (313)
T KOG0198|consen 71 LNHPNIVQYYGSSSSRE---NDEYNIFMEYAPGGSLSDLIKRYGG---KLPEPLVRRYTRQILEGLAYLH---SKGIVHC 141 (313)
T ss_pred CCCCCEEeeCCcccccc---CeeeEeeeeccCCCcHHHHHHHcCC---CCCHHHHHHHHHHHHHHHHHHH---hCCEecc
Confidence 44999999999633311 1358899999999999999986642 5999999999999999999999 9999999
Q ss_pred cccCCceeeCC-CCceEecccccccccCC---------cCCCccccccccccCCC-CcCccccchhHHHHHHHHHhCCCC
Q 042634 259 DLKPSNVLLDG-ELTAHVGDFGLAKFLPE---------ATNNFFNFQIAEYGMGS-EVSTSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 259 Dlkp~NIll~~-~~~~kL~DFG~a~~~~~---------~~~~~~~y~aPE~~~~~-~~~~~~DiwS~G~vl~ell~g~~p 327 (427)
||||+|||++. ++.+||+|||.++.... ...||+.|||||++... ...+++||||+||++.||+||++|
T Consensus 142 DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~P 221 (313)
T KOG0198|consen 142 DIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPP 221 (313)
T ss_pred CcccceEEEeCCCCeEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCc
Confidence 99999999999 79999999999986652 12899999999999853 334699999999999999999999
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
|...... .............. ..+...+.+..+++++|++.||++||||
T Consensus 222 W~~~~~~---~~~~~~ig~~~~~P----------------------------~ip~~ls~~a~~Fl~~C~~~~p~~Rpta 270 (313)
T KOG0198|consen 222 WSEFFEE---AEALLLIGREDSLP----------------------------EIPDSLSDEAKDFLRKCFKRDPEKRPTA 270 (313)
T ss_pred chhhcch---HHHHHHHhccCCCC----------------------------CCCcccCHHHHHHHHHHhhcCcccCcCH
Confidence 9763000 00011110000000 1233456678999999999999999999
Q ss_pred HHHHHHHHH
Q 042634 408 EEVAAQLLS 416 (427)
Q Consensus 408 ~ev~~~L~~ 416 (427)
+|++++--.
T Consensus 271 ~eLL~hpf~ 279 (313)
T KOG0198|consen 271 EELLEHPFL 279 (313)
T ss_pred HHHhhChhh
Confidence 999987543
No 17
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=7.5e-38 Score=274.09 Aligned_cols=217 Identities=19% Similarity=0.251 Sum_probs=157.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||+|.++++|.. ....++|+|||+..-|.++ +... ..++...+++++.|++.|+.|+| +++++||
T Consensus 58 LkH~NLVnLiEVFrr-----krklhLVFE~~dhTvL~eL-e~~p---~G~~~~~vk~~l~Q~l~ai~~cH---k~n~IHR 125 (396)
T KOG0593|consen 58 LKHENLVNLIEVFRR-----KRKLHLVFEYCDHTVLHEL-ERYP---NGVPSELVKKYLYQLLKAIHFCH---KNNCIHR 125 (396)
T ss_pred cccchHHHHHHHHHh-----cceeEEEeeecchHHHHHH-Hhcc---CCCCHHHHHHHHHHHHHHhhhhh---hcCeecc
Confidence 689999999999654 6789999999976555443 3332 45889999999999999999999 9999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-C-----CCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-T-----NNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-~-----~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||+|||++.++.+||||||+|+.+... . +.|.+|+|||.+.+ ..|+.++||||.||++.||++|.+.|.+.
T Consensus 126 DIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~ 205 (396)
T KOG0593|consen 126 DIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGR 205 (396)
T ss_pred cCChhheEEecCCcEEeccchhhHhhcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCc
Confidence 99999999999999999999999998733 2 67889999999988 78999999999999999999999999875
Q ss_pred cCCCccHHHHH--HHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 332 FTGNLTLHNFV--KEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 332 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
.+-+. +.... -..+.+....++...-... +.............. .-+....-+.+++..|++.||++|+|.+|
T Consensus 206 SDiDQ-Ly~I~ktLG~L~prhq~iF~~N~~F~---Gv~lP~~~~~epLe~-k~p~~s~~~ld~~k~cL~~dP~~R~sc~q 280 (396)
T KOG0593|consen 206 SDIDQ-LYLIRKTLGNLIPRHQSIFSSNPFFH---GVRLPEPEHPEPLER-KYPKISNVLLDLLKKCLKMDPDDRLSCEQ 280 (396)
T ss_pred chHHH-HHHHHHHHcccCHHHHHHhccCCcee---eeecCCCCCccchhh-hcccchHHHHHHHHHHhcCCccccccHHH
Confidence 33222 21111 1122233333332111000 000000000000000 01223446899999999999999999999
Q ss_pred HHH
Q 042634 410 VAA 412 (427)
Q Consensus 410 v~~ 412 (427)
++.
T Consensus 281 ll~ 283 (396)
T KOG0593|consen 281 LLH 283 (396)
T ss_pred Hhc
Confidence 875
No 18
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.9e-38 Score=300.89 Aligned_cols=191 Identities=21% Similarity=0.314 Sum_probs=163.2
Q ss_pred cccccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCee
Q 042634 177 NFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIV 256 (427)
Q Consensus 177 ~ll~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~iv 256 (427)
+++.|||++++|++ +.++.+.|+|.||+++|.|++++... +++++.++.++++||+.|+.|+| ..+|+
T Consensus 67 kLi~HpnVl~LydV-----we~~~~lylvlEyv~gGELFdylv~k----G~l~e~eaa~ff~QIi~gv~yCH---~~~ic 134 (786)
T KOG0588|consen 67 KLIEHPNVLRLYDV-----WENKQHLYLVLEYVPGGELFDYLVRK----GPLPEREAAHFFRQILDGVSYCH---AFNIC 134 (786)
T ss_pred HHhcCCCeeeeeee-----eccCceEEEEEEecCCchhHHHHHhh----CCCCCHHHHHHHHHHHHHHHHHh---hhcce
Confidence 56899999999999 55588999999999999999999766 56999999999999999999999 89999
Q ss_pred eccccCCceeeCCCCceEecccccccccCCcC-----CCccccccccccCCCCc-CccccchhHHHHHHHHHhCCCCCCc
Q 042634 257 HCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGMGSEV-STSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 257 HrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~~~~~-~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
|||+||+|+|+|....+||+|||.|..-..+. +|++.|.|||++++.+| +.++||||.|||||.|++|+.||++
T Consensus 135 HRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD 214 (786)
T KOG0588|consen 135 HRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD 214 (786)
T ss_pred eccCCchhhhhhcccCEeeeccceeecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999998765544 99999999999999998 5789999999999999999999974
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
+.+.....+.-.+. ...|...+.++.+|+++|+..||+.|.|++||
T Consensus 215 -----dNir~LLlKV~~G~-----------------------------f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI 260 (786)
T KOG0588|consen 215 -----DNIRVLLLKVQRGV-----------------------------FEMPSNISSEAQDLLRRMLDVDPSTRITTEEI 260 (786)
T ss_pred -----ccHHHHHHHHHcCc-----------------------------ccCCCcCCHHHHHHHHHHhccCccccccHHHH
Confidence 22333222211110 01445566778999999999999999999999
Q ss_pred HHH
Q 042634 411 AAQ 413 (427)
Q Consensus 411 ~~~ 413 (427)
+++
T Consensus 261 ~kH 263 (786)
T KOG0588|consen 261 LKH 263 (786)
T ss_pred hhC
Confidence 876
No 19
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=5.9e-37 Score=293.54 Aligned_cols=202 Identities=23% Similarity=0.384 Sum_probs=157.7
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhh-----------------------------------
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREA----------------------------------- 224 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~----------------------------------- 224 (427)
+||||+++++.+.. .+...+++|||+++|+|.+++......
T Consensus 69 ~h~niv~~~~~~~~----~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (338)
T cd05102 69 NHLNVVNLLGACTK----PNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASV 144 (338)
T ss_pred cCcceeeEEeEecC----CCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCc
Confidence 79999999997643 234578999999999999888643210
Q ss_pred -----------------------hhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccccCCceeeCCCCceEecccccc
Q 042634 225 -----------------------LKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLA 281 (427)
Q Consensus 225 -----------------------~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a 281 (427)
...+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||++
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a 221 (338)
T cd05102 145 LFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLA 221 (338)
T ss_pred cccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCccceEEEcCCCcEEEeecccc
Confidence 134778899999999999999999 899999999999999999999999999999
Q ss_pred cccCCc--------CCCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhcccchhc
Q 042634 282 KFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLTLHNFVKEALPERLAE 352 (427)
Q Consensus 282 ~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 352 (427)
+..... ..++..|+|||++.+..++.++|||||||++|||++ |..||.+..... .+.........
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~-~~~~~~~~~~~----- 295 (338)
T cd05102 222 RDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE-EFCQRLKDGTR----- 295 (338)
T ss_pred cccccCcchhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH-HHHHHHhcCCC-----
Confidence 865322 134568999999999999999999999999999997 999997532111 11111100000
Q ss_pred ccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 042634 353 IVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQLLSFRNK 420 (427)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~L~~~~~~ 420 (427)
...+..++.++.+++.+||+.||++|||+.|+++.|+++.++
T Consensus 296 --------------------------~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~~ 337 (338)
T cd05102 296 --------------------------MRAPENATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQE 337 (338)
T ss_pred --------------------------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 001223456689999999999999999999999999988653
No 20
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-37 Score=291.26 Aligned_cols=192 Identities=23% Similarity=0.335 Sum_probs=156.2
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecc
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrD 259 (427)
.||||+++++++.. ....++|||||.+|+|.+++... .++.+..++.+++|++.|++||| ++||+|||
T Consensus 78 ~HpnI~~l~ev~~t-----~~~~~ivmEy~~gGdL~~~i~~~----g~l~E~~ar~~F~Qlisav~y~H---~~gi~HRD 145 (370)
T KOG0583|consen 78 SHPNIIRLLEVFAT-----PTKIYIVMEYCSGGDLFDYIVNK----GRLKEDEARKYFRQLISAVAYCH---SRGIVHRD 145 (370)
T ss_pred cCCCEeEEEEEEec-----CCeEEEEEEecCCccHHHHHHHc----CCCChHHHHHHHHHHHHHHHHHH---hCCEeeCC
Confidence 39999999999544 55699999999999999999874 56899999999999999999999 99999999
Q ss_pred ccCCceeeCCC-CceEecccccccccC-Cc-----CCCccccccccccCCCC-cC-ccccchhHHHHHHHHHhCCCCCCc
Q 042634 260 LKPSNVLLDGE-LTAHVGDFGLAKFLP-EA-----TNNFFNFQIAEYGMGSE-VS-TSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 260 lkp~NIll~~~-~~~kL~DFG~a~~~~-~~-----~~~~~~y~aPE~~~~~~-~~-~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
|||+|||++.+ +.+||+|||++.... .. .+||+.|+|||++.+.. |+ .++||||+||++|.|++|+.||++
T Consensus 146 LK~ENilld~~~~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d 225 (370)
T KOG0583|consen 146 LKPENILLDGNEGNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDD 225 (370)
T ss_pred CCHHHEEecCCCCCEEEeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCC
Confidence 99999999999 999999999999873 22 28999999999999987 85 789999999999999999999986
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHH-HHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKEC-LVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
. ............ .. ..+... ..++.+++.+|+..||.+|+|+.|
T Consensus 226 ~-----~~~~l~~ki~~~--------~~---------------------~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~ 271 (370)
T KOG0583|consen 226 S-----NVPNLYRKIRKG--------EF---------------------KIPSYLLSPEARSLIEKMLVPDPSTRITLLE 271 (370)
T ss_pred c-----cHHHHHHHHhcC--------Cc---------------------cCCCCcCCHHHHHHHHHHcCCCcccCCCHHH
Confidence 2 111111111110 00 011122 556889999999999999999999
Q ss_pred HHHHHHHHH
Q 042634 410 VAAQLLSFR 418 (427)
Q Consensus 410 v~~~L~~~~ 418 (427)
|+ .-.-++
T Consensus 272 i~-~h~w~~ 279 (370)
T KOG0583|consen 272 IL-EHPWFQ 279 (370)
T ss_pred Hh-hChhhc
Confidence 98 444333
No 21
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-37 Score=281.26 Aligned_cols=204 Identities=25% Similarity=0.292 Sum_probs=159.0
Q ss_pred CcccccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 042634 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255 (427)
Q Consensus 176 N~ll~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~i 255 (427)
-.+.+||||++++.++.. +...|+||.||.+|++.+.++..-. ..+++..+..|++++++||.||| .+|.
T Consensus 78 msl~~HPNIv~~~~sFvv-----~~~LWvVmpfMa~GS~ldIik~~~~--~Gl~E~~Ia~iLre~LkaL~YLH---~~G~ 147 (516)
T KOG0582|consen 78 MSLIDHPNIVTYHCSFVV-----DSELWVVMPFMAGGSLLDIIKTYYP--DGLEEASIATILREVLKALDYLH---QNGH 147 (516)
T ss_pred hhhcCCCCcceEEEEEEe-----cceeEEeehhhcCCcHHHHHHHHcc--ccccHHHHHHHHHHHHHHHHHHH---hcCc
Confidence 345789999999988655 6789999999999999999875433 55999999999999999999999 9999
Q ss_pred eeccccCCceeeCCCCceEecccccccccCCc----------CCCccccccccccCC--CCcCccccchhHHHHHHHHHh
Q 042634 256 VHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA----------TNNFFNFQIAEYGMG--SEVSTSGDVYSFGILLLETFT 323 (427)
Q Consensus 256 vHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~----------~~~~~~y~aPE~~~~--~~~~~~~DiwS~G~vl~ell~ 323 (427)
||||||+.||||+++|.+||+|||++..+... ..||+.|||||+++. ..|+.|+||||||++..|+.+
T Consensus 148 IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~ 227 (516)
T KOG0582|consen 148 IHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAH 227 (516)
T ss_pred eecccccccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhc
Confidence 99999999999999999999999998765322 278999999999654 579999999999999999999
Q ss_pred CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCC
Q 042634 324 GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRE 403 (427)
Q Consensus 324 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~ 403 (427)
|..||.....-..-+ .-++...|-......+ . .........+.+++..|++.||++
T Consensus 228 G~aPf~k~pPmkvLl-~tLqn~pp~~~t~~~~----~-------------------d~~k~~~ksf~e~i~~CL~kDP~k 283 (516)
T KOG0582|consen 228 GHAPFSKYPPMKVLL-LTLQNDPPTLLTSGLD----K-------------------DEDKKFSKSFREMIALCLVKDPSK 283 (516)
T ss_pred CCCCcccCChHHHHH-HHhcCCCCCcccccCC----h-------------------HHhhhhcHHHHHHHHHHhhcCccc
Confidence 999998652211111 1111111111100011 0 022334557899999999999999
Q ss_pred CCCHHHHHHH
Q 042634 404 RMNMEEVAAQ 413 (427)
Q Consensus 404 Rpt~~ev~~~ 413 (427)
|||++++++.
T Consensus 284 RptAskLlkh 293 (516)
T KOG0582|consen 284 RPTASKLLKH 293 (516)
T ss_pred CCCHHHHhcc
Confidence 9999999864
No 22
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1e-36 Score=284.27 Aligned_cols=202 Identities=24% Similarity=0.324 Sum_probs=159.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+... ..+....++||||+++|+|.+++... ..+++..+..++.|++.|+.|||. ..+++||
T Consensus 75 l~h~nIv~~~g~~~~~-~~~~~~~~lv~Ey~~~g~L~~~l~~~----~~~~~~~~~~i~~~i~~~l~~lH~--~~~~~Hr 147 (283)
T PHA02988 75 IDSNNILKIYGFIIDI-VDDLPRLSLILEYCTRGYLREVLDKE----KDLSFKTKLDMAIDCCKGLYNLYK--YTNKPYK 147 (283)
T ss_pred cCCCCEEEEeeeEEec-ccCCCceEEEEEeCCCCcHHHHHhhC----CCCChhHHHHHHHHHHHHHHHHHh--cCCCCCC
Confidence 5799999999986431 12234678999999999999999765 358899999999999999999993 2589999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc---CCCccccccccccCC--CCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA---TNNFFNFQIAEYGMG--SEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~---~~~~~~y~aPE~~~~--~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
||||+||+++.++.+||+|||+++..... ..++..|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 148 dlkp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~ 227 (283)
T PHA02988 148 NLTSVSFLVTENYKLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT 227 (283)
T ss_pred cCChhhEEECCCCcEEEcccchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH
Confidence 99999999999999999999999865433 367889999999876 6789999999999999999999999975321
Q ss_pred CCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 042634 334 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQ 413 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~ 413 (427)
..+...+..... . ...+..++.++.+++.+||+.||++|||++|+++.
T Consensus 228 --~~~~~~i~~~~~-------~-----------------------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 275 (283)
T PHA02988 228 --KEIYDLIINKNN-------S-----------------------LKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYN 275 (283)
T ss_pred --HHHHHHHHhcCC-------C-----------------------CCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 111111100000 0 00122356779999999999999999999999999
Q ss_pred HHHHHH
Q 042634 414 LLSFRN 419 (427)
Q Consensus 414 L~~~~~ 419 (427)
|+.+..
T Consensus 276 l~~~~~ 281 (283)
T PHA02988 276 LSLYKF 281 (283)
T ss_pred HHHHHh
Confidence 998864
No 23
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.1e-37 Score=278.96 Aligned_cols=227 Identities=22% Similarity=0.214 Sum_probs=165.2
Q ss_pred ccccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 178 FIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 178 ll~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
.++|||||++.-++....-.+.-...+||||| ..+|.++++........++...++-++.||.+||.||| +.||+|
T Consensus 73 ~l~HpNIV~L~~~f~~~~~~d~~~lnlVleym-P~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh---~~~IcH 148 (364)
T KOG0658|consen 73 KLDHPNIVRLLYFFSSSTESDEVYLNLVLEYM-PETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLH---SHGICH 148 (364)
T ss_pred hcCCcCeeeEEEEEEecCCCchhHHHHHHHhc-hHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHH---hcCccc
Confidence 58899999998776553322223457899999 56899888754334466888999999999999999999 899999
Q ss_pred ccccCCceeeCCC-CceEecccccccccCCcC-----CCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 258 CDLKPSNVLLDGE-LTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 258 rDlkp~NIll~~~-~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
|||||.|+|+|.+ |.+||||||.|+.+..+. ..|..|+|||.+.+ ..|+.+.||||.|||+.||+-|++.|.+
T Consensus 149 RDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG 228 (364)
T KOG0658|consen 149 RDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPG 228 (364)
T ss_pred CCCChheEEEcCCCCeEEeccCCcceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCC
Confidence 9999999999876 999999999999987655 56678999999988 5699999999999999999999999987
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
. .+...+...++-...+...++.........-..+.. ....+.+ ......+.+..+++.++++++|.+|.|+.|+
T Consensus 229 ~-s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~i---k~~~~~~-~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~ 303 (364)
T KOG0658|consen 229 D-SSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQI---KAHPWHK-VFFKRLPPDALDLLSKLLQYSPSKRLSALEA 303 (364)
T ss_pred C-CHHHHHHHHHHHhCCCCHHHHhhcCcccccccCccc---cccccee-ecccCCCHHHHHHHHHHhccChhhcCCHHHH
Confidence 3 333344444443333222222111100000000100 0111111 2334456678999999999999999999999
Q ss_pred HHH
Q 042634 411 AAQ 413 (427)
Q Consensus 411 ~~~ 413 (427)
+++
T Consensus 304 l~h 306 (364)
T KOG0658|consen 304 LAH 306 (364)
T ss_pred hcc
Confidence 864
No 24
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-37 Score=290.79 Aligned_cols=201 Identities=25% Similarity=0.375 Sum_probs=165.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+|.||+-++|+|.. ....||+.+|+|.+|+.+++..+ ..|...+.+.|++|||+|+.||| .++||||
T Consensus 445 TRH~NIlLFMG~~~~------p~~AIiTqwCeGsSLY~hlHv~e---tkfdm~~~idIAqQiaqGM~YLH---AK~IIHr 512 (678)
T KOG0193|consen 445 TRHENILLFMGACMN------PPLAIITQWCEGSSLYTHLHVQE---TKFDMNTTIDIAQQIAQGMDYLH---AKNIIHR 512 (678)
T ss_pred cchhhheeeehhhcC------CceeeeehhccCchhhhhccchh---hhhhHHHHHHHHHHHHHhhhhhh---hhhhhhh
Confidence 789999999999765 23489999999999999999876 45899999999999999999999 9999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC--------cCCCccccccccccCCC---CcCccccchhHHHHHHHHHhCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE--------ATNNFFNFQIAEYGMGS---EVSTSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~--------~~~~~~~y~aPE~~~~~---~~~~~~DiwS~G~vl~ell~g~~p 327 (427)
|||..||++.++++|||+|||++..... ...|..-|||||+++.. +|++.+||||||||+|||++|..|
T Consensus 513 DLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lP 592 (678)
T KOG0193|consen 513 DLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELP 592 (678)
T ss_pred hccccceEEccCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCC
Confidence 9999999999999999999999975421 12677789999998753 689999999999999999999999
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
|.. ...+..+...-+.++.++. ......|++++.+|+..||..++++||++
T Consensus 593 ysi-~~~dqIifmVGrG~l~pd~----------------------------s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F 643 (678)
T KOG0193|consen 593 YSI-QNRDQIIFMVGRGYLMPDL----------------------------SKIRSNCPKAMKRLLSDCWKFDREERPLF 643 (678)
T ss_pred cCC-CChhheEEEecccccCccc----------------------------hhhhccCHHHHHHHHHHHHhcCcccCccH
Confidence 983 2222222222222222111 11345688999999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 042634 408 EEVAAQLLSFRNK 420 (427)
Q Consensus 408 ~ev~~~L~~~~~~ 420 (427)
.+|+..|+++..+
T Consensus 644 ~~il~~l~~l~~~ 656 (678)
T KOG0193|consen 644 PQLLSKLEELLPS 656 (678)
T ss_pred HHHHHHHHHhhhc
Confidence 9999999988764
No 25
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-37 Score=312.88 Aligned_cols=203 Identities=27% Similarity=0.388 Sum_probs=168.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh---hhhccCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE---ALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~i 255 (427)
++|||||+++|+|.. ....+|++|||++|||..++++.+. ....++..+.+.++.|||+|++||+ ++++
T Consensus 752 f~HpNiv~liGv~l~-----~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe---~~~f 823 (1025)
T KOG1095|consen 752 FDHPNIVSLIGVCLD-----SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLE---SKHF 823 (1025)
T ss_pred CCCcceeeEEEeecC-----CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHH---hCCC
Confidence 689999999999865 4578999999999999999987621 1256889999999999999999999 8999
Q ss_pred eeccccCCceeeCCCCceEecccccccccCCcC--------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCC
Q 042634 256 VHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT--------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKR 326 (427)
Q Consensus 256 vHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~--------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~ 326 (427)
|||||..+|||+++...+||+|||+|+.+.... .-...|||||.+....++.|+|||||||++||+++ |..
T Consensus 824 vHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~ 903 (1025)
T KOG1095|consen 824 VHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGAT 903 (1025)
T ss_pred cCcchhhhheeecccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCC
Confidence 999999999999999999999999999543222 23458999999999999999999999999999999 999
Q ss_pred CCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC
Q 042634 327 PTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN 406 (427)
Q Consensus 327 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt 406 (427)
||.+.... .+...+.... +...|..|++.++++|..||+.+|++||+
T Consensus 904 PY~~~~n~--~v~~~~~~gg-------------------------------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~ 950 (1025)
T KOG1095|consen 904 PYPSRSNF--EVLLDVLEGG-------------------------------RLDPPSYCPEKLYQLMLQCWKHDPEDRPS 950 (1025)
T ss_pred CCCCcchH--HHHHHHHhCC-------------------------------ccCCCCCCChHHHHHHHHHccCChhhCcc
Confidence 99764221 1111111100 12256779999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 042634 407 MEEVAAQLLSFRNKLV 422 (427)
Q Consensus 407 ~~ev~~~L~~~~~~~~ 422 (427)
+..+++.+..+.+.+.
T Consensus 951 F~~i~~q~~~i~~~~~ 966 (1025)
T KOG1095|consen 951 FRTIVEQDPAISNAAL 966 (1025)
T ss_pred HHHHHhhhhhhhhhhc
Confidence 9999999999887654
No 26
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-37 Score=274.72 Aligned_cols=219 Identities=24% Similarity=0.322 Sum_probs=160.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|+|||.+++.........-+..|+|+|+| +.||.+.++.+ ..++...+..++.|+++||+|+| +.+|+||
T Consensus 78 ~~HeNIi~l~di~~p~~~~~f~DvYiV~elM-etDL~~iik~~----~~L~d~H~q~f~YQiLrgLKyiH---SAnViHR 149 (359)
T KOG0660|consen 78 LRHENIIGLLDIFRPPSRDKFNDVYLVFELM-ETDLHQIIKSQ----QDLTDDHAQYFLYQILRGLKYIH---SANVIHR 149 (359)
T ss_pred hcCCCcceEEeecccccccccceeEEehhHH-hhHHHHHHHcC----ccccHHHHHHHHHHHHHhcchhh---ccccccc
Confidence 5699999999987664445556789999999 88999999876 34999999999999999999999 9999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC----c----CCCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE----A----TNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~----~----~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~ 329 (427)
|+||.|++++.+..+||||||+|+...+ + -..|..|+|||++.. ..|+.++||||.|||+.||++|++.|.
T Consensus 150 DLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFp 229 (359)
T KOG0660|consen 150 DLKPSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFP 229 (359)
T ss_pred ccchhheeeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCC
Confidence 9999999999999999999999998852 1 167889999999865 679999999999999999999999997
Q ss_pred cccCCCccHHHHHHHhcc----cchhcccCccccccccccchhh-hccccccccccchHHHHHHHHHHHhhcCCCCCCCC
Q 042634 330 EMFTGNLTLHNFVKEALP----ERLAEIVDPVLLVEREEGETSK-ANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRER 404 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~R 404 (427)
+...-+ .+ +.+...++ ..+..+-...... ...+. .....+|...+ +.......+++.+|+..||.+|
T Consensus 230 G~d~v~-Ql-~lI~~~lGtP~~e~l~~i~s~~ar~----yi~slp~~p~~~f~~~f--p~a~p~AidLlekmL~fdP~kR 301 (359)
T KOG0660|consen 230 GKDYVH-QL-QLILELLGTPSEEDLQKIRSEKARP----YIKSLPQIPKQPFSSIF--PNANPLAIDLLEKMLVFDPKKR 301 (359)
T ss_pred CCchHH-HH-HHHHHhcCCCCHHHHHHhccHHHHH----HHHhCCCCCCCCHHHHc--CCCCHHHHHHHHHHhccCcccc
Confidence 632111 11 11122111 1111111000000 00000 00011111111 2445678999999999999999
Q ss_pred CCHHHHHHH
Q 042634 405 MNMEEVAAQ 413 (427)
Q Consensus 405 pt~~ev~~~ 413 (427)
+|++|++++
T Consensus 302 ita~eAL~h 310 (359)
T KOG0660|consen 302 ITAEEALAH 310 (359)
T ss_pred CCHHHHhcC
Confidence 999999874
No 27
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-36 Score=258.70 Aligned_cols=195 Identities=21% Similarity=0.243 Sum_probs=156.1
Q ss_pred CcccccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 042634 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255 (427)
Q Consensus 176 N~ll~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~i 255 (427)
++.++|||||++.+.. +.....|+|+|+|.|++|..-+-.+ ..+++..+-.+++||+.||.|+| .+||
T Consensus 64 C~~LqHP~IvrL~~ti-----~~~~~~ylvFe~m~G~dl~~eIV~R----~~ySEa~aSH~~rQiLeal~yCH---~n~I 131 (355)
T KOG0033|consen 64 CRKLQHPNIVRLHDSI-----QEESFHYLVFDLVTGGELFEDIVAR----EFYSEADASHCIQQILEALAYCH---SNGI 131 (355)
T ss_pred HHhcCCCcEeehhhhh-----cccceeEEEEecccchHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH---hcCc
Confidence 5668999999999884 4466789999999999998776554 44889999999999999999999 9999
Q ss_pred eeccccCCceeeCC---CCceEecccccccccCCcC-----CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCC
Q 042634 256 VHCDLKPSNVLLDG---ELTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 256 vHrDlkp~NIll~~---~~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~p 327 (427)
||||+||+|+++.+ ..-+||+|||+|..+..+. .||++|||||++...+|+..+||||.|||+|-++.|..|
T Consensus 132 vHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~P 211 (355)
T KOG0033|consen 132 VHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 211 (355)
T ss_pred eeccCChhheeeeeccCCCceeecccceEEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCC
Confidence 99999999999954 4579999999999887543 899999999999999999999999999999999999999
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
|.+... ...+.+.....+.- +....+...++..+++++|+..||.+|.|+
T Consensus 212 F~~~~~-~rlye~I~~g~yd~-----------------------------~~~~w~~is~~Ak~LvrrML~~dP~kRIta 261 (355)
T KOG0033|consen 212 FWDEDQ-HRLYEQIKAGAYDY-----------------------------PSPEWDTVTPEAKSLIRRMLTVNPKKRITA 261 (355)
T ss_pred CCCccH-HHHHHHHhccccCC-----------------------------CCcccCcCCHHHHHHHHHHhccChhhhccH
Confidence 986311 11111111111100 000223345668899999999999999999
Q ss_pred HHHHH
Q 042634 408 EEVAA 412 (427)
Q Consensus 408 ~ev~~ 412 (427)
.|.+.
T Consensus 262 ~EAL~ 266 (355)
T KOG0033|consen 262 DEALK 266 (355)
T ss_pred HHHhC
Confidence 98764
No 28
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=9.2e-36 Score=256.66 Aligned_cols=214 Identities=20% Similarity=0.259 Sum_probs=160.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|+||+.++++ |.......+|+||| ..||+..+++.. ..++..+++.++.++++|++||| ++.|+||
T Consensus 58 l~h~nIi~LiD~-----F~~~~~l~lVfEfm-~tdLe~vIkd~~---i~l~pa~iK~y~~m~LkGl~y~H---~~~IlHR 125 (318)
T KOG0659|consen 58 LKHPNIIELIDV-----FPHKSNLSLVFEFM-PTDLEVVIKDKN---IILSPADIKSYMLMTLKGLAYCH---SKWILHR 125 (318)
T ss_pred ccCcchhhhhhh-----ccCCCceEEEEEec-cccHHHHhcccc---cccCHHHHHHHHHHHHHHHHHHH---hhhhhcc
Confidence 569999999999 45567889999999 779999998765 56999999999999999999999 9999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC------CCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT------NNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~------~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||.|+|++++|.+||+|||+|+...... +-|..|+|||.+.+ +.|+..+||||.|||+.||+-|.+-|.+.
T Consensus 126 DlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~ 205 (318)
T KOG0659|consen 126 DLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGD 205 (318)
T ss_pred cCCccceEEcCCCcEEeecccchhccCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCC
Confidence 999999999999999999999999876543 56789999999887 56899999999999999999999877653
Q ss_pred cCCCccHHHHHHHhcc---cchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 332 FTGNLTLHNFVKEALP---ERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
. +-+.+....+.... ..+.++.. ..++-+-. ..+..........+.....+++.+||.+||.+|+|+.
T Consensus 206 s-DidQL~~If~~LGTP~~~~WP~~~~---lpdY~~~~-----~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~ 276 (318)
T KOG0659|consen 206 S-DIDQLSKIFRALGTPTPDQWPEMTS---LPDYVKIQ-----QFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITAS 276 (318)
T ss_pred c-hHHHHHHHHHHcCCCCcccCccccc---cccHHHHh-----cCCCCccccccccccHHHHHHHHhhhccCchhcccHH
Confidence 2 22222222222221 22222111 11110000 0000000002233456679999999999999999999
Q ss_pred HHHHH
Q 042634 409 EVAAQ 413 (427)
Q Consensus 409 ev~~~ 413 (427)
|++++
T Consensus 277 qaL~~ 281 (318)
T KOG0659|consen 277 QALKH 281 (318)
T ss_pred HHhcc
Confidence 99864
No 29
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.2e-36 Score=260.27 Aligned_cols=194 Identities=22% Similarity=0.314 Sum_probs=159.6
Q ss_pred ccccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 178 FIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 178 ll~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
+..||+|+++.+. ++.+...++|+|.|+.|.|++++... -.++++..++|++|+..|+.||| .++|||
T Consensus 79 v~GHP~II~l~D~-----yes~sF~FlVFdl~prGELFDyLts~----VtlSEK~tR~iMrqlfegVeylH---a~~IVH 146 (411)
T KOG0599|consen 79 VMGHPYIIDLQDV-----YESDAFVFLVFDLMPRGELFDYLTSK----VTLSEKETRRIMRQLFEGVEYLH---ARNIVH 146 (411)
T ss_pred hcCCCcEEEeeee-----ccCcchhhhhhhhcccchHHHHhhhh----eeecHHHHHHHHHHHHHHHHHHH---Hhhhhh
Confidence 3679999999998 44467889999999999999999765 45999999999999999999999 899999
Q ss_pred ccccCCceeeCCCCceEecccccccccCCcC-----CCccccccccccCC------CCcCccccchhHHHHHHHHHhCCC
Q 042634 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGMG------SEVSTSGDVYSFGILLLETFTGKR 326 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~~------~~~~~~~DiwS~G~vl~ell~g~~ 326 (427)
||+||+|||++++..+||+|||+|..+..+. +||++|.|||.+.. +.|+..+|+||.|||||.++.|.+
T Consensus 147 RDLKpENILlddn~~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcp 226 (411)
T KOG0599|consen 147 RDLKPENILLDDNMNIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCP 226 (411)
T ss_pred cccChhheeeccccceEEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999999988765 99999999998753 468999999999999999999999
Q ss_pred CCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC
Q 042634 327 PTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN 406 (427)
Q Consensus 327 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt 406 (427)
||-... +.+. ++-+..... -.++..+.+....+.+++.+|++.||.+|.|
T Consensus 227 PFwHRk-------QmlM------LR~ImeGky-----------------qF~speWadis~~~KdLIsrlLqVdp~~Rit 276 (411)
T KOG0599|consen 227 PFWHRK-------QMLM------LRMIMEGKY-----------------QFRSPEWADISATVKDLISRLLQVDPTKRIT 276 (411)
T ss_pred chhHHH-------HHHH------HHHHHhccc-----------------ccCCcchhhccccHHHHHHHHHeeCchhccc
Confidence 996420 1100 000000000 0112244556778899999999999999999
Q ss_pred HHHHHHH
Q 042634 407 MEEVAAQ 413 (427)
Q Consensus 407 ~~ev~~~ 413 (427)
++|++++
T Consensus 277 ake~LaH 283 (411)
T KOG0599|consen 277 AKEALAH 283 (411)
T ss_pred HHHHhcC
Confidence 9999875
No 30
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-36 Score=263.99 Aligned_cols=141 Identities=27% Similarity=0.391 Sum_probs=131.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
..||.++++++.+. ++...++||||.+||.|+.++++. .+++++.++.++.||+.|++||| +.+|++|
T Consensus 101 v~~PFlv~l~~t~~-----d~~~lymvmeyv~GGElFS~Lrk~----~rF~e~~arFYAAeivlAleylH---~~~iiYR 168 (355)
T KOG0616|consen 101 VSHPFLVKLYGTFK-----DNSNLYMVMEYVPGGELFSYLRKS----GRFSEPHARFYAAEIVLALEYLH---SLDIIYR 168 (355)
T ss_pred ccCceeEEEEEeec-----cCCeEEEEEeccCCccHHHHHHhc----CCCCchhHHHHHHHHHHHHHHHH---hcCeeec
Confidence 56999999998844 477899999999999999999876 45999999999999999999999 9999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC---CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT---NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~---~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
|+||+|||+|++|.+||+|||+|+.+.... +||+.|+|||++...+|+.++|+|||||++|||+.|.+||...
T Consensus 169 DLKPENiLlD~~G~iKitDFGFAK~v~~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~ 244 (355)
T KOG0616|consen 169 DLKPENLLLDQNGHIKITDFGFAKRVSGRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDD 244 (355)
T ss_pred cCChHHeeeccCCcEEEEeccceEEecCcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCC
Confidence 999999999999999999999999887665 9999999999999999999999999999999999999999763
No 31
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-35 Score=253.44 Aligned_cols=210 Identities=17% Similarity=0.238 Sum_probs=165.6
Q ss_pred CCcccccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCC
Q 042634 175 RNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETP 254 (427)
Q Consensus 175 ~N~ll~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ 254 (427)
..+..+|||+++++++...-.-++....|++++|...|+|.+.++........+++.+++.|+.++++||++|| +..
T Consensus 71 ~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH---~~~ 147 (302)
T KOG2345|consen 71 NHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALH---EKE 147 (302)
T ss_pred HHHhhCCcchHHHHHHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHh---ccC
Confidence 34557899999999987654444556689999999999999999876655567999999999999999999999 555
Q ss_pred --eeeccccCCceeeCCCCceEecccccccccCCc---------------CCCccccccccccCCC---CcCccccchhH
Q 042634 255 --IVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA---------------TNNFFNFQIAEYGMGS---EVSTSGDVYSF 314 (427)
Q Consensus 255 --ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~---------------~~~~~~y~aPE~~~~~---~~~~~~DiwS~ 314 (427)
++||||||.|||+.+++.++|.|||.+....-. ...|..|+|||.+.-+ ..+.++|||||
T Consensus 148 ~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSL 227 (302)
T KOG2345|consen 148 PPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSL 227 (302)
T ss_pred CcccccCCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhh
Confidence 999999999999999999999999999865321 1678899999998654 45899999999
Q ss_pred HHHHHHHHhCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHh
Q 042634 315 GILLLETFTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGV 394 (427)
Q Consensus 315 G~vl~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 394 (427)
||++|+|+.|..||+.....+..+.- .+..+.+.. . .....++.+.+++.
T Consensus 228 GCtLYa~mf~~sPfe~~~~~GgSlaL-----------Av~n~q~s~----------------P---~~~~yse~l~~lik 277 (302)
T KOG2345|consen 228 GCTLYAMMFGESPFERIYQQGGSLAL-----------AVQNAQISI----------------P---NSSRYSEALHQLIK 277 (302)
T ss_pred hHHHHHHHHcCCcchHHhhcCCeEEE-----------eeecccccc----------------C---CCCCccHHHHHHHH
Confidence 99999999999999865332222110 111111100 0 01115677899999
Q ss_pred hcCCCCCCCCCCHHHHHHHHHHH
Q 042634 395 TCSSELPRERMNMEEVAAQLLSF 417 (427)
Q Consensus 395 ~cl~~dP~~Rpt~~ev~~~L~~~ 417 (427)
+|++.||.+|||+.|++..++.+
T Consensus 278 ~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 278 SMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred HHhcCCcccCCCHHHHHHHHHhh
Confidence 99999999999999999998865
No 32
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=294.99 Aligned_cols=203 Identities=25% Similarity=0.276 Sum_probs=163.1
Q ss_pred cccccchhhhccccccCCCCC--CccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCee
Q 042634 179 IRHRNLVKIITSCASVDFQGN--DSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIV 256 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~iv 256 (427)
..|+|||.+++......-.++ -...|.||||.+|.|-+++..+.. ..|++.++++|+.|+|+|+.+||.. ...||
T Consensus 92 ~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq--~~lte~eVLkIf~dv~~AVa~mH~~-~pPiI 168 (738)
T KOG1989|consen 92 SGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQ--TRLTEDEVLKIFYDVCEAVAAMHYL-KPPII 168 (738)
T ss_pred cCCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHh--ccCChHHHHHHHHHHHHHHHHHhcC-CCccc
Confidence 569999999995433332223 345788999999999999986654 5599999999999999999999954 56799
Q ss_pred eccccCCceeeCCCCceEecccccccccCCc---------------CCCcccccccccc---CCCCcCccccchhHHHHH
Q 042634 257 HCDLKPSNVLLDGELTAHVGDFGLAKFLPEA---------------TNNFFNFQIAEYG---MGSEVSTSGDVYSFGILL 318 (427)
Q Consensus 257 HrDlkp~NIll~~~~~~kL~DFG~a~~~~~~---------------~~~~~~y~aPE~~---~~~~~~~~~DiwS~G~vl 318 (427)
|||||.|||||..++..||||||.|...... ...|+.|+|||++ .+.++++|+||||+||+|
T Consensus 169 HRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclL 248 (738)
T KOG1989|consen 169 HRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLL 248 (738)
T ss_pred hhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHH
Confidence 9999999999999999999999999753211 1688999999986 567889999999999999
Q ss_pred HHHHhCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCC
Q 042634 319 LETFTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSS 398 (427)
Q Consensus 319 ~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~ 398 (427)
|-|+....||++... ..+++..+.. ...+.....+.+||+.||+
T Consensus 249 YkLCy~t~PFe~sg~-----------------laIlng~Y~~-------------------P~~p~ys~~l~~LI~~mL~ 292 (738)
T KOG1989|consen 249 YKLCYFTTPFEESGK-----------------LAILNGNYSF-------------------PPFPNYSDRLKDLIRTMLQ 292 (738)
T ss_pred HHHHHhCCCcCcCcc-----------------eeEEeccccC-------------------CCCccHHHHHHHHHHHHhc
Confidence 999999999986311 1122211111 0124578889999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHH
Q 042634 399 ELPRERMNMEEVAAQLLSFRNK 420 (427)
Q Consensus 399 ~dP~~Rpt~~ev~~~L~~~~~~ 420 (427)
.||.+||++-||+..+.++..+
T Consensus 293 ~nP~~RPnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 293 PNPDERPNIYQVLEEIFELANK 314 (738)
T ss_pred cCcccCCCHHHHHHHHHHHhcC
Confidence 9999999999999999998753
No 33
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=282.06 Aligned_cols=198 Identities=25% Similarity=0.399 Sum_probs=168.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||+|+++++|.. ....|||+|||..|+|.+|+++... ..++....+.++.||+.|++||. .+++|||
T Consensus 320 ikHpNLVqLLGVCT~-----EpPFYIiTEfM~yGNLLdYLRecnr--~ev~avvLlyMAtQIsSaMeYLE---kknFIHR 389 (1157)
T KOG4278|consen 320 IKHPNLVQLLGVCTH-----EPPFYIITEFMCYGNLLDYLRECNR--SEVPAVVLLYMATQISSAMEYLE---KKNFIHR 389 (1157)
T ss_pred hcCccHHHHhhhhcc-----CCCeEEEEecccCccHHHHHHHhch--hhcchhHHHHHHHHHHHHHHHHH---Hhhhhhh
Confidence 789999999999977 5678999999999999999987655 55788888999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC----C---CccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT----N---NFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~----~---~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~ 330 (427)
||..+|+|+.++..+|++|||+++.+..+. . -...|.|||-+.-..++.|+|||+|||++||+.| |..||.+
T Consensus 390 DLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPG 469 (1157)
T KOG4278|consen 390 DLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPG 469 (1157)
T ss_pred hhhhhhccccccceEEeeccchhhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCC
Confidence 999999999999999999999999987655 2 2357999999999999999999999999999998 9999987
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
.. +.+.. +++.. ..+...++.|+..+++||+.||+|+|.+||+++|+
T Consensus 470 id-----lSqVY---------~LLEk-------------------gyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaei 516 (1157)
T KOG4278|consen 470 ID-----LSQVY---------GLLEK-------------------GYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEI 516 (1157)
T ss_pred cc-----HHHHH---------HHHhc-------------------cccccCCCCCCHHHHHHHHHHhcCCcccCccHHHH
Confidence 41 11111 11111 11122567799999999999999999999999999
Q ss_pred HHHHHHHHH
Q 042634 411 AAQLLSFRN 419 (427)
Q Consensus 411 ~~~L~~~~~ 419 (427)
-+.++.+-.
T Consensus 517 HqafEtmf~ 525 (1157)
T KOG4278|consen 517 HQAFETMFS 525 (1157)
T ss_pred HHHHHHHhc
Confidence 999998743
No 34
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-35 Score=276.25 Aligned_cols=214 Identities=23% Similarity=0.295 Sum_probs=156.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||||++.+...... ....|+|+||| .-||..++.... -.|++.+++.+++|++.||+||| .+||+||
T Consensus 173 l~HpNIikL~eivt~~~---~~siYlVFeYM-dhDL~GLl~~p~---vkft~~qIKc~mkQLl~Gl~~cH---~~gvlHR 242 (560)
T KOG0600|consen 173 LDHPNIIKLEEIVTSKL---SGSIYLVFEYM-DHDLSGLLSSPG---VKFTEPQIKCYMKQLLEGLEYCH---SRGVLHR 242 (560)
T ss_pred cCCCcccceeeEEEecC---CceEEEEEecc-cchhhhhhcCCC---cccChHHHHHHHHHHHHHHHHHh---hcCeeec
Confidence 68999999999865531 35789999999 458888887643 45999999999999999999999 9999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC-------CCccccccccccCCC-CcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT-------NNFFNFQIAEYGMGS-EVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~-------~~~~~y~aPE~~~~~-~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
|||.+|||||.+|.+||+|||+|+++.... +-|..|+|||.+.+. .|+.++|+||.||||.||+.|++.|.+
T Consensus 243 DIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G 322 (560)
T KOG0600|consen 243 DIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQG 322 (560)
T ss_pred cccccceEEcCCCCEEeccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCC
Confidence 999999999999999999999999775433 567899999999884 699999999999999999999999986
Q ss_pred ccCCCccHHHHHHHhcc---cchhcccCccccccccccchhhhccccccccc--cchHHHHHHHHHHHhhcCCCCCCCCC
Q 042634 331 MFTGNLTLHNFVKEALP---ERLAEIVDPVLLVEREEGETSKANAHKQFTRS--FSVKECLVSVLGIGVTCSSELPRERM 405 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~cl~~dP~~Rp 405 (427)
..+- ..+.....--.. ..+. ..+ +.. .......+.+.+. ......+....+|+..+|..||.+|.
T Consensus 323 ~tEv-eQl~kIfklcGSP~e~~W~-~~k--LP~------~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~ 392 (560)
T KOG0600|consen 323 RTEV-EQLHKIFKLCGSPTEDYWP-VSK--LPH------ATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRG 392 (560)
T ss_pred ccHH-HHHHHHHHHhCCCChhccc-ccc--CCc------ccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccc
Confidence 4221 112221111111 1111 000 000 0000000000000 01222356688999999999999999
Q ss_pred CHHHHHH
Q 042634 406 NMEEVAA 412 (427)
Q Consensus 406 t~~ev~~ 412 (427)
||.+++.
T Consensus 393 tA~~aL~ 399 (560)
T KOG0600|consen 393 TASSALQ 399 (560)
T ss_pred cHHHHhc
Confidence 9999875
No 35
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-35 Score=279.44 Aligned_cols=192 Identities=21% Similarity=0.276 Sum_probs=163.4
Q ss_pred cccccchhhhccccccCCCCCCc-cceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 179 IRHRNLVKIITSCASVDFQGNDS-EALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~-~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
+.|||||.+.+++.. +.. .+|||+||+||++.+.+..... ..++++.+..++.|++.|++||| +..|+|
T Consensus 60 ~~hP~iv~y~ds~~~-----~~~~l~Ivm~Y~eGg~l~~~i~~~k~--~~f~E~~i~~~~~Q~~~av~ylH---~~~iLH 129 (426)
T KOG0589|consen 60 LLHPNIVEYKDSFEE-----DGQLLCIVMEYCEGGDLAQLIKEQKG--VLFPEERILKWFVQILLAVNYLH---ENRVLH 129 (426)
T ss_pred ccCCCeeeeccchhc-----CCceEEEEEeecCCCCHHHHHHHHhh--ccccHHHHHHHHHHHHHHHHHHH---hhhhhc
Confidence 789999999999644 444 8999999999999999977653 67999999999999999999999 899999
Q ss_pred ccccCCceeeCCCCceEecccccccccCCcC------CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEAT------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~DFG~a~~~~~~~------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||+.||+++.+..+||+|||+|+.+.... .||+.|+.||++.+.+|+.|+||||+||++|||++-+++|...
T Consensus 130 RDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~ 209 (426)
T KOG0589|consen 130 RDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKAS 209 (426)
T ss_pred ccchhhhhhccccCceeecchhhhhhcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCcc
Confidence 9999999999999999999999999987653 8999999999999999999999999999999999999999763
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
.+...+....... .++ .+.....++..++..|+..+|+.||++.+++
T Consensus 210 -----~m~~Li~ki~~~~----~~P------------------------lp~~ys~el~~lv~~~l~~~P~~RPsa~~LL 256 (426)
T KOG0589|consen 210 -----NMSELILKINRGL----YSP------------------------LPSMYSSELRSLVKSMLRKNPEHRPSALELL 256 (426)
T ss_pred -----chHHHHHHHhhcc----CCC------------------------CCccccHHHHHHHHHHhhcCCccCCCHHHHh
Confidence 1222222222211 111 2334566789999999999999999999999
Q ss_pred HH
Q 042634 412 AQ 413 (427)
Q Consensus 412 ~~ 413 (427)
.+
T Consensus 257 ~~ 258 (426)
T KOG0589|consen 257 RR 258 (426)
T ss_pred hC
Confidence 87
No 36
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.6e-35 Score=264.61 Aligned_cols=188 Identities=23% Similarity=0.364 Sum_probs=159.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||||.++.+ |.+...+.|||||..+|.|++|+..+ ..+++.+++.+++||..|+.|+| .++||||
T Consensus 110 LNHPhII~IyEV-----FENkdKIvivMEYaS~GeLYDYiSer----~~LsErEaRhfFRQIvSAVhYCH---knrVvHR 177 (668)
T KOG0611|consen 110 LNHPHIIQIYEV-----FENKDKIVIVMEYASGGELYDYISER----GSLSEREARHFFRQIVSAVHYCH---KNRVVHR 177 (668)
T ss_pred cCCCceeehhhh-----hcCCceEEEEEEecCCccHHHHHHHh----ccccHHHHHHHHHHHHHHHHHHh---hccceec
Confidence 789999999999 55577899999999999999999877 45999999999999999999999 9999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC-----CCccccccccccCCCCc-CccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGMGSEV-STSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~~~~~-~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
|||.+|||+|.++.+||+|||++-.+.... +|++-|.+||+..+.+| ++.+|.||+||++|.++.|..||++.
T Consensus 178 DLKLENILLD~N~NiKIADFGLSNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~- 256 (668)
T KOG0611|consen 178 DLKLENILLDQNNNIKIADFGLSNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGR- 256 (668)
T ss_pred ccchhheeecCCCCeeeeccchhhhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCc-
Confidence 999999999999999999999998877655 89999999999999988 67899999999999999999999874
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
+...+++..-.+...+ ++.+.....++++|+..+|++|.|+++|..
T Consensus 257 ----Dhk~lvrQIs~GaYrE------------------------------P~~PSdA~gLIRwmLmVNP~RRATieDiAs 302 (668)
T KOG0611|consen 257 ----DHKRLVRQISRGAYRE------------------------------PETPSDASGLIRWMLMVNPERRATIEDIAS 302 (668)
T ss_pred ----hHHHHHHHhhcccccC------------------------------CCCCchHHHHHHHHHhcCcccchhHHHHhh
Confidence 2233333322221110 112334567999999999999999999976
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
+
T Consensus 303 H 303 (668)
T KOG0611|consen 303 H 303 (668)
T ss_pred h
Confidence 4
No 37
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-35 Score=284.97 Aligned_cols=199 Identities=25% Similarity=0.369 Sum_probs=165.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||||+++|++.. ....++|||+|.||+|.+++++.. ..++..++..++.++|.||+||| +.+++||
T Consensus 218 l~H~NVVr~yGVa~~-----~~Pl~ivmEl~~gGsL~~~L~k~~---~~v~~~ek~~~~~~AA~Gl~YLh---~k~~IHR 286 (474)
T KOG0194|consen 218 LNHPNVVRFYGVAVL-----EEPLMLVMELCNGGSLDDYLKKNK---KSLPTLEKLRFCYDAARGLEYLH---SKNCIHR 286 (474)
T ss_pred CCCCCEEEEEEEEcC-----CCccEEEEEecCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHhHHHHHH---HCCCcch
Confidence 789999999998765 567899999999999999998765 35999999999999999999999 9999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~~ 331 (427)
||-++|||++.+..+||+|||+++....-. .-+..|.|||.+....|++++|||||||++||+++ |..||.+.
T Consensus 287 DIAARNcL~~~~~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~ 366 (474)
T KOG0194|consen 287 DIAARNCLYSKKGVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGM 366 (474)
T ss_pred hHhHHHheecCCCeEEeCccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCC
Confidence 999999999999999999999998764211 24468999999999999999999999999999999 88999875
Q ss_pred cCCCccHHHHH-HHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 332 FTGNLTLHNFV-KEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 332 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
... .....+ ....+ ...+...+..+..++.+||..+|++||||.++
T Consensus 367 ~~~--~v~~kI~~~~~r-------------------------------~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i 413 (474)
T KOG0194|consen 367 KNY--EVKAKIVKNGYR-------------------------------MPIPSKTPKELAKVMKQCWKKDPEDRPTMSTI 413 (474)
T ss_pred CHH--HHHHHHHhcCcc-------------------------------CCCCCCCHHHHHHHHHHhccCChhhccCHHHH
Confidence 221 111111 11111 11233457778899999999999999999999
Q ss_pred HHHHHHHHHHH
Q 042634 411 AAQLLSFRNKL 421 (427)
Q Consensus 411 ~~~L~~~~~~~ 421 (427)
.+.++.+....
T Consensus 414 ~~~l~~~~~~~ 424 (474)
T KOG0194|consen 414 KKKLEALEKKK 424 (474)
T ss_pred HHHHHHHHhcc
Confidence 99999997653
No 38
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=5.5e-35 Score=283.12 Aligned_cols=199 Identities=24% Similarity=0.384 Sum_probs=155.9
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh------------------------------------
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE------------------------------------ 223 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------------------------------------ 223 (427)
+|||||++++.+.. ....++|||||++|+|.+++.....
T Consensus 100 ~h~nIv~~~~~~~~-----~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (374)
T cd05106 100 QHKNIVNLLGACTH-----GGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFS 174 (374)
T ss_pred cCCceeeEeeEecC-----CCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhccccccccccc
Confidence 79999999998644 5578999999999999988753211
Q ss_pred ------------------------------hhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccccCCceeeCCCCce
Q 042634 224 ------------------------------ALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTA 273 (427)
Q Consensus 224 ------------------------------~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 273 (427)
....+++..+++++.||+.||+||| ++||+||||||+|||++.++.+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~giiHrDLkp~Nil~~~~~~~ 251 (374)
T cd05106 175 SQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLA---SKNCIHRDVAARNVLLTDGRVA 251 (374)
T ss_pred ccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCEEeccCchheEEEeCCCeE
Confidence 0124788899999999999999999 8999999999999999999999
Q ss_pred EecccccccccCCcC--------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCcccCCCccHHHHHHH
Q 042634 274 HVGDFGLAKFLPEAT--------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLTLHNFVKE 344 (427)
Q Consensus 274 kL~DFG~a~~~~~~~--------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~~~~~~~~~~~~~~~ 344 (427)
||+|||+++...... .++..|+|||++....++.++|||||||++|||++ |+.||....... .+......
T Consensus 252 kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-~~~~~~~~ 330 (374)
T cd05106 252 KICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-KFYKMVKR 330 (374)
T ss_pred EEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH-HHHHHHHc
Confidence 999999998653321 23457999999988899999999999999999997 999997542211 11111111
Q ss_pred hcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHH
Q 042634 345 ALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQLLSFR 418 (427)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~L~~~~ 418 (427)
..... .+...+.++.+++.+||+.||++|||+.||++.|+++.
T Consensus 331 ~~~~~-------------------------------~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 331 GYQMS-------------------------------RPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred ccCcc-------------------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 00000 01112456899999999999999999999999999863
No 39
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=4.4e-35 Score=275.21 Aligned_cols=190 Identities=22% Similarity=0.271 Sum_probs=151.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+.|.||+++.+ |++....||||||++|||+.++|... ..|++..++.++.+++.|++-+| ..|++||
T Consensus 198 ~ds~~vVKLyYs-----FQD~~~LYLiMEylPGGD~mTLL~~~----~~L~e~~arfYiaE~vlAI~~iH---~~gyIHR 265 (550)
T KOG0605|consen 198 VDSPWVVKLYYS-----FQDKEYLYLIMEYLPGGDMMTLLMRK----DTLTEDWARFYIAETVLAIESIH---QLGYIHR 265 (550)
T ss_pred cCCCcEEEEEEE-----ecCCCeeEEEEEecCCccHHHHHHhc----CcCchHHHHHHHHHHHHHHHHHH---HcCcccc
Confidence 568999999988 66688999999999999999999766 45999999999999999999999 9999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC--------------------------c-------------------------
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE--------------------------A------------------------- 287 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~--------------------------~------------------------- 287 (427)
||||+|+|||..|++||+|||+|..+.. .
T Consensus 266 DIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a 345 (550)
T KOG0605|consen 266 DIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLA 345 (550)
T ss_pred cCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhh
Confidence 9999999999999999999999963210 0
Q ss_pred --CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhcccchhcccCcccccccccc
Q 042634 288 --TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEG 365 (427)
Q Consensus 288 --~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (427)
.+||+-|+|||++.+..|+..+|+||+|||+|||+.|.+||..... ...+...+... .. +..
T Consensus 346 ~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp-~~T~rkI~nwr------~~----l~f----- 409 (550)
T KOG0605|consen 346 YSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETP-QETYRKIVNWR------ET----LKF----- 409 (550)
T ss_pred hcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHh------hh----ccC-----
Confidence 0799999999999999999999999999999999999999986421 11122211110 00 000
Q ss_pred chhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC---HHHHH
Q 042634 366 ETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN---MEEVA 411 (427)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt---~~ev~ 411 (427)
.....+..+..++|.+|+. ||++|-- ++||-
T Consensus 410 --------------P~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK 443 (550)
T KOG0605|consen 410 --------------PEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIK 443 (550)
T ss_pred --------------CCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHh
Confidence 0112234678999999999 9999964 55554
No 40
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-35 Score=255.78 Aligned_cols=203 Identities=22% Similarity=0.235 Sum_probs=162.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
..|||||.+++++... +.+..-..+|||.|+||.|+..+++++. ..+++.++-.|++||+.|++||| +.+|.||
T Consensus 112 s~h~~iV~IidVyeNs-~~~rkcLLiVmE~meGGeLfsriq~~g~--~afTErea~eI~~qI~~Av~~lH---~~nIAHR 185 (400)
T KOG0604|consen 112 SGHPHIVSIIDVYENS-YQGRKCLLIVMECMEGGELFSRIQDRGD--QAFTEREASEIMKQIGLAVRYLH---SMNIAHR 185 (400)
T ss_pred cCCCceEEeehhhhhh-ccCceeeEeeeecccchHHHHHHHHccc--ccchHHHHHHHHHHHHHHHHHHH---hcchhhc
Confidence 4699999999987653 4555566789999999999999987765 67999999999999999999999 8999999
Q ss_pred cccCCceeeCC---CCceEecccccccccCCcC-----CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 259 DLKPSNVLLDG---ELTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~---~~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
||||+|+|... +..+||+|||+|+...... +-|+.|.|||++...+|+..+|+||+||++|-|++|.+||..
T Consensus 186 DlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS 265 (400)
T KOG0604|consen 186 DLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 265 (400)
T ss_pred cCChhheeeecCCCCcceEecccccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccc
Confidence 99999999954 5689999999999766332 678899999999999999999999999999999999999976
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
..+.. +..-++..+ .... --.+...+.+.++...++++.++..+|.+|.|++|+
T Consensus 266 ~hg~a--ispgMk~rI-------~~gq-----------------y~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~ 319 (400)
T KOG0604|consen 266 NHGLA--ISPGMKRRI-------RTGQ-----------------YEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEV 319 (400)
T ss_pred cCCcc--CChhHHhHh-------hccC-----------------ccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHh
Confidence 43211 111111110 0000 011223567788899999999999999999999998
Q ss_pred HHH
Q 042634 411 AAQ 413 (427)
Q Consensus 411 ~~~ 413 (427)
...
T Consensus 320 m~h 322 (400)
T KOG0604|consen 320 MDH 322 (400)
T ss_pred hcC
Confidence 753
No 41
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=8.6e-35 Score=274.40 Aligned_cols=203 Identities=24% Similarity=0.414 Sum_probs=153.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh---------------hhhccCHHHHHHHHHHHHHH
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE---------------ALKNLNLLQRLSIAVDVASA 243 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---------------~~~~l~~~~~~~~~~~i~~~ 243 (427)
++||||+++++.+.. ....++||||+++|+|.+++..... ....+++..+..++.|++.|
T Consensus 76 l~h~niv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~a 150 (304)
T cd05096 76 LKDPNIIRLLGVCVD-----EDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASG 150 (304)
T ss_pred cCCCCeeEEEEEEec-----CCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 579999999998644 4568999999999999988754211 11347788899999999999
Q ss_pred HHHHhhcCCCCeeeccccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCCCCcCccccchhHH
Q 042634 244 LDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFG 315 (427)
Q Consensus 244 L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DiwS~G 315 (427)
|+||| +.||+||||||+||+++.++.+||+|||+++..... ..++..|+|||++....++.++||||||
T Consensus 151 l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG 227 (304)
T cd05096 151 MKYLS---SLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFG 227 (304)
T ss_pred HHHHH---HCCccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHH
Confidence 99999 899999999999999999999999999999865332 1346789999999888999999999999
Q ss_pred HHHHHHHh--CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHH
Q 042634 316 ILLLETFT--GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIG 393 (427)
Q Consensus 316 ~vl~ell~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 393 (427)
|++|||++ +..||..... ......+............ ...+..++..+.+++
T Consensus 228 ~~l~el~~~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~li 281 (304)
T cd05096 228 VTLWEILMLCKEQPYGELTD--EQVIENAGEFFRDQGRQVY------------------------LFRPPPCPQGLYELM 281 (304)
T ss_pred HHHHHHHHccCCCCCCcCCH--HHHHHHHHHHhhhcccccc------------------------ccCCCCCCHHHHHHH
Confidence 99999987 5567765321 1111111111100000000 001223567789999
Q ss_pred hhcCCCCCCCCCCHHHHHHHHH
Q 042634 394 VTCSSELPRERMNMEEVAAQLL 415 (427)
Q Consensus 394 ~~cl~~dP~~Rpt~~ev~~~L~ 415 (427)
.+||+.||++|||++||.+.|+
T Consensus 282 ~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 282 LQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred HHHccCCchhCcCHHHHHHHHh
Confidence 9999999999999999998876
No 42
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.1e-34 Score=281.35 Aligned_cols=198 Identities=23% Similarity=0.372 Sum_probs=154.9
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh------------------------------------
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE------------------------------------ 223 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------------------------------------ 223 (427)
+||||+++++.+.. +...++|||||++|+|.++++....
T Consensus 97 ~HpnIv~l~~~~~~-----~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 171 (375)
T cd05104 97 NHINIVNLLGACTV-----GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDM 171 (375)
T ss_pred CCcceeeeeeeecc-----CCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhc
Confidence 69999999998644 5678999999999999988854221
Q ss_pred -----------------------------------hhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccccCCceeeC
Q 042634 224 -----------------------------------ALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLD 268 (427)
Q Consensus 224 -----------------------------------~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~ 268 (427)
....+++..+..++.||+.||+||| +.||+||||||+||+++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nill~ 248 (375)
T cd05104 172 KPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLA---SKNCIHRDLAARNILLT 248 (375)
T ss_pred CCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCchhhEEEE
Confidence 0124788899999999999999999 89999999999999999
Q ss_pred CCCceEecccccccccCCcC--------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCcccCCCccHH
Q 042634 269 GELTAHVGDFGLAKFLPEAT--------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLTLH 339 (427)
Q Consensus 269 ~~~~~kL~DFG~a~~~~~~~--------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~~~~~~~~~~ 339 (427)
.++.+||+|||+++...... .++..|+|||++.+..++.++|||||||++|||++ |..||....... .+.
T Consensus 249 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~-~~~ 327 (375)
T cd05104 249 HGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS-KFY 327 (375)
T ss_pred CCCcEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH-HHH
Confidence 99999999999998654321 23457999999999999999999999999999998 888987542211 111
Q ss_pred HHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 042634 340 NFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQLLSF 417 (427)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~L~~~ 417 (427)
+.+...... ..+...+.++.+++.+||+.||++|||+.||++.|++.
T Consensus 328 ~~~~~~~~~-------------------------------~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 328 KMIKEGYRM-------------------------------LSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred HHHHhCccC-------------------------------CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 111111000 01112345689999999999999999999999999863
No 43
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-35 Score=278.74 Aligned_cols=197 Identities=22% Similarity=0.380 Sum_probs=170.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||||+++|+|.+ ...+||||.++-|.|..|++.+. ..++......++.||+.||.||| +...|||
T Consensus 448 fdHphIikLIGv~~e------~P~WivmEL~~~GELr~yLq~nk---~sL~l~tL~ly~~Qi~talaYLe---SkrfVHR 515 (974)
T KOG4257|consen 448 FDHPHIIKLIGVCVE------QPMWIVMELAPLGELREYLQQNK---DSLPLRTLTLYCYQICTALAYLE---SKRFVHR 515 (974)
T ss_pred CCCcchhheeeeeec------cceeEEEecccchhHHHHHHhcc---ccchHHHHHHHHHHHHHHHHHHH---hhchhhh
Confidence 689999999999876 56899999999999999998765 46888899999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC-------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT-------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~-------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~ 330 (427)
||..+|||+.+...+||+|||+++.+.... .-+..|||||.+....++.++|||-|||.+||++. |..||.+
T Consensus 516 DIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqg 595 (974)
T KOG4257|consen 516 DIAARNILVSSPQCVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQG 595 (974)
T ss_pred hhhhhheeecCcceeeecccchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccc
Confidence 999999999999999999999999886654 33457999999999999999999999999999987 9999987
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
..+.+.. -. .....+...|+.||..++.+|.+||++||.+||++.|+
T Consensus 596 vkNsDVI-----------------~~----------------iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei 642 (974)
T KOG4257|consen 596 VKNSDVI-----------------GH----------------IENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEI 642 (974)
T ss_pred ccccceE-----------------EE----------------ecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHH
Confidence 6433211 00 01122333678899999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 042634 411 AAQLLSFRNK 420 (427)
Q Consensus 411 ~~~L~~~~~~ 420 (427)
.+.|+++..+
T Consensus 643 ~~~lsdv~qe 652 (974)
T KOG4257|consen 643 KAILSDVLQE 652 (974)
T ss_pred HHHHHHHHHH
Confidence 9999999763
No 44
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=9.5e-35 Score=272.15 Aligned_cols=218 Identities=21% Similarity=0.260 Sum_probs=156.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
..||||+++++.+...........++||||+. ++|.+++..... ..+++..+..++.|++.||+||| +.||+||
T Consensus 61 ~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~lH---~~~iiH~ 134 (290)
T cd07862 61 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPE--PGVPTETIKDMMFQLLRGLDFLH---SHRVVHR 134 (290)
T ss_pred cCCCCcceEEEEEecccCCCCCcEEEEEccCC-CCHHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeC
Confidence 46999999999875433444566899999994 789888865432 34889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
||||+|||++.++.+||+|||+++..... ..++..|+|||++.+..++.++|||||||++|||++|++||.+...
T Consensus 135 dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~ 214 (290)
T cd07862 135 DLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD 214 (290)
T ss_pred CCCHHHEEEcCCCCEEEccccceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCH
Confidence 99999999999999999999999865432 2578899999999888999999999999999999999999976421
Q ss_pred CCccHHHHHHHhc-c--cchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 334 GNLTLHNFVKEAL-P--ERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 334 ~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
. ..+........ + ..+..... ... .... ........ ......+..+.+++.+||+.||++|||+.|+
T Consensus 215 ~-~~~~~i~~~~~~~~~~~~~~~~~----~~~--~~~~--~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~ 284 (290)
T cd07862 215 V-DQLGKILDVIGLPGEEDWPRDVA----LPR--QAFH--SKSAQPIE-KFVTDIDELGKDLLLKCLTFNPAKRISAYSA 284 (290)
T ss_pred H-HHHHHHHHHhCCCChhhchhhhc----ccc--hhcc--CCCCCCHH-HHccCCCHHHHHHHHHHhccCchhcCCHHHH
Confidence 1 11111111110 0 00000000 000 0000 00000000 0112245678899999999999999999999
Q ss_pred HH
Q 042634 411 AA 412 (427)
Q Consensus 411 ~~ 412 (427)
++
T Consensus 285 l~ 286 (290)
T cd07862 285 LS 286 (290)
T ss_pred hc
Confidence 85
No 45
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=7.4e-35 Score=258.54 Aligned_cols=223 Identities=19% Similarity=0.196 Sum_probs=158.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+|||||.+-.+... .+.+..|+||||| .-||..++.... .+|...+++.++.|+++|++||| .+.|+||
T Consensus 132 ~~H~NIV~vkEVVvG---~~~d~iy~VMe~~-EhDLksl~d~m~---q~F~~~evK~L~~QlL~glk~lH---~~wilHR 201 (419)
T KOG0663|consen 132 ARHPNIVEVKEVVVG---SNMDKIYIVMEYV-EHDLKSLMETMK---QPFLPGEVKTLMLQLLRGLKHLH---DNWILHR 201 (419)
T ss_pred cCCCCeeeeEEEEec---cccceeeeeHHHH-HhhHHHHHHhcc---CCCchHHHHHHHHHHHHHHHHHh---hceeEec
Confidence 469999998877543 2345689999999 558888887654 56999999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC------CCccccccccccCCC-CcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT------NNFFNFQIAEYGMGS-EVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~------~~~~~y~aPE~~~~~-~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
|||++|+|++..|.+||+|||+|+.+.... +-|..|+|||.+.+. .|+.++|+||+|||+.|++++++.|.+.
T Consensus 202 DLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~ 281 (419)
T KOG0663|consen 202 DLKTSNLLLSHKGILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGK 281 (419)
T ss_pred ccchhheeeccCCcEEecccchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCC
Confidence 999999999999999999999999987653 567899999999884 5899999999999999999999999864
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
.. -..+....+....+. ..++.....................+...+......+.-.+++...+.+||.+|.|++|.+
T Consensus 282 sE-~dQl~~If~llGtPt-e~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L 359 (419)
T KOG0663|consen 282 SE-IDQLDKIFKLLGTPS-EAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGL 359 (419)
T ss_pred ch-HHHHHHHHHHhCCCc-cccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhh
Confidence 22 222333222211110 0011000000000000000000001111111111346678999999999999999999987
Q ss_pred HH
Q 042634 412 AQ 413 (427)
Q Consensus 412 ~~ 413 (427)
++
T Consensus 360 ~h 361 (419)
T KOG0663|consen 360 KH 361 (419)
T ss_pred cc
Confidence 63
No 46
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.7e-34 Score=267.05 Aligned_cols=195 Identities=23% Similarity=0.345 Sum_probs=155.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. +...++||||+++|+|.+++.... ..+++.+++.++.|++.||+||| +.|++||
T Consensus 63 l~h~~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~---~~l~~~~~~~~~~~i~~al~~lH---~~~iiH~ 131 (266)
T cd05064 63 FDHSNIVRLEGVITR-----GNTMMIVTEYMSNGALDSFLRKHE---GQLVAGQLMGMLPGLASGMKYLS---EMGYVHK 131 (266)
T ss_pred CCCCCcCeEEEEEec-----CCCcEEEEEeCCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHH---HCCEeec
Confidence 479999999988543 567899999999999999986542 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-------CCCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~ 330 (427)
||||+||+++.++.+|++|||.+...... ..++..|+|||.+.+..++.++|||||||++||+++ |+.||..
T Consensus 132 dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~ 211 (266)
T cd05064 132 GLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWD 211 (266)
T ss_pred cccHhhEEEcCCCcEEECCCcccccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCc
Confidence 99999999999999999999987654222 134568999999999999999999999999999875 9999975
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
.... .+.+.+.... ....+..++..+.+++.+||+.+|++|||++||
T Consensus 212 ~~~~--~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i 258 (266)
T cd05064 212 MSGQ--DVIKAVEDGF-------------------------------RLPAPRNCPNLLHQLMLDCWQKERGERPRFSQI 258 (266)
T ss_pred CCHH--HHHHHHHCCC-------------------------------CCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHH
Confidence 3111 1111110000 000223456778999999999999999999999
Q ss_pred HHHHHHH
Q 042634 411 AAQLLSF 417 (427)
Q Consensus 411 ~~~L~~~ 417 (427)
.+.|+++
T Consensus 259 ~~~l~~~ 265 (266)
T cd05064 259 HSILSKM 265 (266)
T ss_pred HHHHHhh
Confidence 9998764
No 47
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=6.1e-35 Score=291.45 Aligned_cols=194 Identities=21% Similarity=0.251 Sum_probs=155.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||||++++.+.. +...++||||+++|+|.+++.........+++..+..++.|++.||+||| ++||+||
T Consensus 122 l~Hpniv~~~~~~~~-----~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivHr 193 (478)
T PTZ00267 122 CDHFGIVKHFDDFKS-----DDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVH---SRKMMHR 193 (478)
T ss_pred CCCCCEeEEEEEEEE-----CCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEEC
Confidence 689999999998644 56789999999999999888654332245889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
||||+|||++.++.+||+|||+|+..... ..||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 194 Dlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~ 273 (478)
T PTZ00267 194 DLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKG 273 (478)
T ss_pred CcCHHhEEECCCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999865432 1588999999999999999999999999999999999999964
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
.. ............. .+ .+..++.++.+++.+||+.||++|||++|+
T Consensus 274 ~~-----~~~~~~~~~~~~~----~~------------------------~~~~~s~~~~~li~~~L~~dP~~Rps~~~~ 320 (478)
T PTZ00267 274 PS-----QREIMQQVLYGKY----DP------------------------FPCPVSSGMKALLDPLLSKNPALRPTTQQL 320 (478)
T ss_pred CC-----HHHHHHHHHhCCC----CC------------------------CCccCCHHHHHHHHHHhccChhhCcCHHHH
Confidence 31 1111111111000 00 111234568999999999999999999999
Q ss_pred HHH
Q 042634 411 AAQ 413 (427)
Q Consensus 411 ~~~ 413 (427)
+..
T Consensus 321 l~~ 323 (478)
T PTZ00267 321 LHT 323 (478)
T ss_pred HhC
Confidence 753
No 48
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=7.4e-35 Score=274.16 Aligned_cols=188 Identities=27% Similarity=0.384 Sum_probs=160.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||||.+++. |....+.++|.|||.| +|++++.+. ..++++.++.++.|++.||.||| +.+|+||
T Consensus 58 lkHpniv~m~es-----fEt~~~~~vVte~a~g-~L~~il~~d----~~lpEe~v~~~a~~LVsaL~yLh---s~rilhr 124 (808)
T KOG0597|consen 58 LKHPNIVEMLES-----FETSAHLWVVTEYAVG-DLFTILEQD----GKLPEEQVRAIAYDLVSALYYLH---SNRILHR 124 (808)
T ss_pred cCCcchhhHHHh-----hcccceEEEEehhhhh-hHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHH---hcCcccc
Confidence 689999999998 4557889999999955 999999876 45999999999999999999999 9999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC------CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
|+||.|||++..+++|+||||+|+....+. .||+-|||||.+.+.+|+..+|.||+|||+||+++|++||...
T Consensus 125 d~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~- 203 (808)
T KOG0597|consen 125 DMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR- 203 (808)
T ss_pred cCCcceeeecCCCceeechhhhhhhcccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH-
Confidence 999999999999999999999999887654 8999999999999999999999999999999999999999642
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
.+.+.++....+.. ..+.+....+..++...+..||.+|.|-.+++.
T Consensus 204 ----si~~Lv~~I~~d~v-----------------------------~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 204 ----SITQLVKSILKDPV-----------------------------KPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred ----HHHHHHHHHhcCCC-----------------------------CCcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 23333333222110 123355677899999999999999999988875
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
+
T Consensus 251 H 251 (808)
T KOG0597|consen 251 H 251 (808)
T ss_pred C
Confidence 4
No 49
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=5.7e-35 Score=277.89 Aligned_cols=189 Identities=21% Similarity=0.244 Sum_probs=151.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+. .+...++||||+++|+|.+++... ..+++..+..++.||+.||+||| +.||+||
T Consensus 52 l~hp~i~~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~L~~lH---~~~ivHr 119 (323)
T cd05571 52 TRHPFLTALKYSFQ-----THDRLCFVMEYANGGELFFHLSRE----RVFSEDRARFYGAEIVSALGYLH---SCDVVYR 119 (323)
T ss_pred CCCCCCCCEEEEEE-----cCCEEEEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeC
Confidence 57999999988743 356789999999999999888654 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||+++.... ...|++.|+|||++.+..++.++||||+||++|||++|+.||....
T Consensus 120 Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~ 199 (323)
T cd05571 120 DLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 199 (323)
T ss_pred CCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCC
Confidence 9999999999999999999999975322 1268899999999999999999999999999999999999996521
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC-----CH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM-----NM 407 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp-----t~ 407 (427)
............. ..+...+.++.+++.+||+.||++|| ++
T Consensus 200 -----~~~~~~~~~~~~~-----------------------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~ 245 (323)
T cd05571 200 -----HEKLFELILMEEI-----------------------------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDA 245 (323)
T ss_pred -----HHHHHHHHHcCCC-----------------------------CCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCH
Confidence 1111111100000 01122345688999999999999999 78
Q ss_pred HHHHHH
Q 042634 408 EEVAAQ 413 (427)
Q Consensus 408 ~ev~~~ 413 (427)
.|++++
T Consensus 246 ~~ll~h 251 (323)
T cd05571 246 KEIMEH 251 (323)
T ss_pred HHHHcC
Confidence 888753
No 50
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.1e-34 Score=271.99 Aligned_cols=189 Identities=22% Similarity=0.294 Sum_probs=152.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+. +....++||||+++|+|.+++... ..+++..+..++.|++.||+||| ++||+||
T Consensus 58 l~hp~iv~~~~~~~-----~~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~ 125 (291)
T cd05612 58 VSHPFIIRLFWTEH-----DQRFLYMLMEYVPGGELFSYLRNS----GRFSNSTGLFYASEIVCALEYLH---SKEIVYR 125 (291)
T ss_pred CCCCcHhhhHhhhc-----cCCeEEEEEeCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeec
Confidence 57999999998743 356789999999999999998654 35889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC---CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT---NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGN 335 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~---~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~~ 335 (427)
||||+||+++.++.+||+|||+++...... .|++.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 126 dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~-- 203 (291)
T cd05612 126 DLKPENILLDKEGHIKLTDFGFAKKLRDRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP-- 203 (291)
T ss_pred CCCHHHeEECCCCCEEEEecCcchhccCCcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--
Confidence 999999999999999999999998765432 688999999999999999999999999999999999999975311
Q ss_pred ccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC-----HHHH
Q 042634 336 LTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN-----MEEV 410 (427)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt-----~~ev 410 (427)
........... . . .+...+..+.+++.+||+.||.+||+ ++|+
T Consensus 204 ---~~~~~~i~~~~--------~----------------~-----~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~ 251 (291)
T cd05612 204 ---FGIYEKILAGK--------L----------------E-----FPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDV 251 (291)
T ss_pred ---HHHHHHHHhCC--------c----------------C-----CCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHH
Confidence 11111110000 0 0 11122456789999999999999995 8888
Q ss_pred HHH
Q 042634 411 AAQ 413 (427)
Q Consensus 411 ~~~ 413 (427)
+++
T Consensus 252 l~h 254 (291)
T cd05612 252 KNH 254 (291)
T ss_pred hcC
Confidence 765
No 51
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-34 Score=267.97 Aligned_cols=194 Identities=25% Similarity=0.346 Sum_probs=151.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||||+++++..+. .....|+|+|||..|.+...=... ..+++.+++++++++..||+||| .+||+||
T Consensus 165 l~H~nVV~LiEvLDDP---~s~~~YlVley~s~G~v~w~p~d~----~els~~~Ar~ylrDvv~GLEYLH---~QgiiHR 234 (576)
T KOG0585|consen 165 LHHPNVVKLIEVLDDP---ESDKLYLVLEYCSKGEVKWCPPDK----PELSEQQARKYLRDVVLGLEYLH---YQGIIHR 234 (576)
T ss_pred cCCcCeeEEEEeecCc---ccCceEEEEEeccCCccccCCCCc----ccccHHHHHHHHHHHHHHHHHHH---hcCeecc
Confidence 7899999999986553 356799999999998875543322 22899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC-----------cCCCccccccccccCCCC----cCccccchhHHHHHHHHHh
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE-----------ATNNFFNFQIAEYGMGSE----VSTSGDVYSFGILLLETFT 323 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~-----------~~~~~~~y~aPE~~~~~~----~~~~~DiwS~G~vl~ell~ 323 (427)
||||+|+|+++++++||+|||++..... ...||+.|+|||...++. .+.+.||||+||++|.++.
T Consensus 235 DIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllf 314 (576)
T KOG0585|consen 235 DIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLF 314 (576)
T ss_pred ccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhh
Confidence 9999999999999999999999986522 138999999999987733 2678999999999999999
Q ss_pred CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCC
Q 042634 324 GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRE 403 (427)
Q Consensus 324 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~ 403 (427)
|+.||.+.. . .+... .+++.-+... ..++..+.+.+++.++|+.||++
T Consensus 315 G~~PF~~~~--~---~~l~~--------KIvn~pL~fP-------------------~~pe~~e~~kDli~~lL~KdP~~ 362 (576)
T KOG0585|consen 315 GQLPFFDDF--E---LELFD--------KIVNDPLEFP-------------------ENPEINEDLKDLIKRLLEKDPEQ 362 (576)
T ss_pred ccCCcccch--H---HHHHH--------HHhcCcccCC-------------------CcccccHHHHHHHHHHhhcChhh
Confidence 999997531 1 11111 1111111100 11234567899999999999999
Q ss_pred CCCHHHHHHHH
Q 042634 404 RMNMEEVAAQL 414 (427)
Q Consensus 404 Rpt~~ev~~~L 414 (427)
|.+..+|..+.
T Consensus 363 Ri~l~~ik~Hp 373 (576)
T KOG0585|consen 363 RITLPDIKLHP 373 (576)
T ss_pred eeehhhheecc
Confidence 99999987653
No 52
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=2.5e-34 Score=268.29 Aligned_cols=197 Identities=24% Similarity=0.470 Sum_probs=157.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh------------hhhccCHHHHHHHHHHHHHHHHH
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE------------ALKNLNLLQRLSIAVDVASALDY 246 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~~~~~i~~~L~~ 246 (427)
++||||+++++.+.. ....+++|||+++|+|.+++..... ....+++..++.++.|++.||+|
T Consensus 65 l~h~~i~~~~~~~~~-----~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~ 139 (283)
T cd05048 65 LQHPNIVCLLGVCTK-----EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEY 139 (283)
T ss_pred cCCcccceEEEEEcC-----CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHH
Confidence 579999999988543 4568999999999999998864311 11357889999999999999999
Q ss_pred HhhcCCCCeeeccccCCceeeCCCCceEecccccccccCC--------cCCCccccccccccCCCCcCccccchhHHHHH
Q 042634 247 LHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPE--------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILL 318 (427)
Q Consensus 247 LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~--------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl 318 (427)
|| +.|++||||||+||+++.++.+||+|||+++.... ...++..|+|||.+.+..++.++|||||||++
T Consensus 140 lH---~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il 216 (283)
T cd05048 140 LS---SHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVL 216 (283)
T ss_pred HH---hCCeeccccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHH
Confidence 99 89999999999999999999999999999976422 12456789999999888999999999999999
Q ss_pred HHHHh-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcC
Q 042634 319 LETFT-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCS 397 (427)
Q Consensus 319 ~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl 397 (427)
|||++ |..||.+.... .+...+..... ...+..++.++.+++.+||
T Consensus 217 ~el~~~g~~p~~~~~~~--~~~~~i~~~~~-------------------------------~~~~~~~~~~~~~l~~~c~ 263 (283)
T cd05048 217 WEIFSYGLQPYYGFSNQ--EVIEMIRSRQL-------------------------------LPCPEDCPARVYALMIECW 263 (283)
T ss_pred HHHHcCCCCCCCCCCHH--HHHHHHHcCCc-------------------------------CCCcccCCHHHHHHHHHHc
Confidence 99998 99998753211 11111111000 0023446778999999999
Q ss_pred CCCCCCCCCHHHHHHHHHH
Q 042634 398 SELPRERMNMEEVAAQLLS 416 (427)
Q Consensus 398 ~~dP~~Rpt~~ev~~~L~~ 416 (427)
+.||++|||+.||++.|+.
T Consensus 264 ~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 264 NEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred cCChhhCcCHHHHHHHHhc
Confidence 9999999999999999975
No 53
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=3.7e-34 Score=266.68 Aligned_cols=199 Identities=22% Similarity=0.357 Sum_probs=157.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+. ....++++||+++|+|.+++.... ..+++..+..++.|++.||+||| +.|++||
T Consensus 66 l~h~~iv~~~~~~~------~~~~~~i~e~~~~gsL~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~ 133 (279)
T cd05111 66 LDHAYIVRLLGICP------GASLQLVTQLSPLGSLLDHVRQHR---DSLDPQRLLNWCVQIAKGMYYLE---EHRMVHR 133 (279)
T ss_pred CCCCCcceEEEEEC------CCccEEEEEeCCCCcHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---HCCEecc
Confidence 57999999998753 234678999999999999986543 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~ 329 (427)
||||+||+++.++.+||+|||.++..... ..++..|+|||++.+..++.++|||||||++||+++ |..||.
T Consensus 134 dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~ 213 (279)
T cd05111 134 NLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYA 213 (279)
T ss_pred ccCcceEEEcCCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCC
Confidence 99999999999999999999999865322 145568999999988899999999999999999998 999986
Q ss_pred cccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 330 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
+... ....+.+...... ..+..++..+.+++.+||..||++|||+.|
T Consensus 214 ~~~~--~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~li~~c~~~~p~~Rps~~e 260 (279)
T cd05111 214 GMRP--HEVPDLLEKGERL-------------------------------AQPQICTIDVYMVMVKCWMIDENVRPTFKE 260 (279)
T ss_pred CCCH--HHHHHHHHCCCcC-------------------------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHH
Confidence 5311 1111111110000 011123456788999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 042634 410 VAAQLLSFRNKLV 422 (427)
Q Consensus 410 v~~~L~~~~~~~~ 422 (427)
+++.|..+.+.-+
T Consensus 261 l~~~l~~~~~~~~ 273 (279)
T cd05111 261 LANEFTRMARDPP 273 (279)
T ss_pred HHHHHHHHHhCCc
Confidence 9999999876533
No 54
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=4.5e-34 Score=263.75 Aligned_cols=196 Identities=25% Similarity=0.391 Sum_probs=156.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. ....+++|||+++++|.+++..... ..+++..++.++.|++.||+||| +.|++||
T Consensus 59 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~ 128 (263)
T cd05052 59 IKHPNLVQLLGVCTR-----EPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAMEYLE---KKNFIHR 128 (263)
T ss_pred CCCCChhheEEEEcC-----CCCcEEEEEeCCCCcHHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCEeec
Confidence 479999999988544 4567999999999999998865432 45889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC-------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT-------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~-------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~ 330 (427)
||||+||+++.++.+||+|||.++...... ..+..|+|||.+.+..++.++|||||||++|||++ |..||.+
T Consensus 129 dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~ 208 (263)
T cd05052 129 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 208 (263)
T ss_pred ccCcceEEEcCCCcEEeCCCccccccccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Confidence 999999999999999999999998765432 23457999999998999999999999999999998 9999865
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
.. ..+....... ... ...+..++.++.+++.+||+.||++|||+.|+
T Consensus 209 ~~-----~~~~~~~~~~-----~~~-----------------------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l 255 (263)
T cd05052 209 ID-----LSQVYELLEK-----GYR-----------------------MERPEGCPPKVYELMRACWQWNPSDRPSFAEI 255 (263)
T ss_pred CC-----HHHHHHHHHC-----CCC-----------------------CCCCCCCCHHHHHHHHHHccCCcccCCCHHHH
Confidence 31 1111111000 000 00122345678999999999999999999999
Q ss_pred HHHHHHH
Q 042634 411 AAQLLSF 417 (427)
Q Consensus 411 ~~~L~~~ 417 (427)
++.|+.+
T Consensus 256 ~~~l~~~ 262 (263)
T cd05052 256 HQAFETM 262 (263)
T ss_pred HHHHHhh
Confidence 9999875
No 55
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.4e-34 Score=273.92 Aligned_cols=188 Identities=23% Similarity=0.292 Sum_probs=150.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+. .....++||||+++|+|.+++... ..+++..+..++.|++.||+||| +.||+||
T Consensus 50 l~h~~iv~~~~~~~-----~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~Hr 117 (312)
T cd05585 50 VNCPFIVPLKFSFQ-----SPEKLYLVLAFINGGELFHHLQRE----GRFDLSRARFYTAELLCALENLH---KFNVIYR 117 (312)
T ss_pred CCCCcEeceeeEEe-----cCCeEEEEEcCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeC
Confidence 47999999988753 356789999999999999988654 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||+++..... ..||..|+|||++.+..++.++||||+||++|||++|+.||....
T Consensus 118 Dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~ 197 (312)
T cd05585 118 DLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN 197 (312)
T ss_pred CCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCC
Confidence 99999999999999999999999864221 268899999999999999999999999999999999999997531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC---HHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN---MEE 409 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt---~~e 409 (427)
..+.......... ..+...+.++.+++.+||+.||++||+ +.|
T Consensus 198 -----~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e 243 (312)
T cd05585 198 -----VNEMYRKILQEPL-----------------------------RFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQE 243 (312)
T ss_pred -----HHHHHHHHHcCCC-----------------------------CCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHH
Confidence 1111111111000 011224556889999999999999985 566
Q ss_pred HHH
Q 042634 410 VAA 412 (427)
Q Consensus 410 v~~ 412 (427)
++.
T Consensus 244 ~l~ 246 (312)
T cd05585 244 IKN 246 (312)
T ss_pred HHc
Confidence 654
No 56
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=4.3e-34 Score=273.19 Aligned_cols=202 Identities=24% Similarity=0.371 Sum_probs=157.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh-----------------------------------
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE----------------------------------- 223 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~----------------------------------- 223 (427)
.+||||+++++.|.. .+...+++|||+++++|.+++.....
T Consensus 68 ~~h~niv~~~~~~~~----~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (337)
T cd05054 68 GHHLNVVNLLGACTK----PGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSA 143 (337)
T ss_pred ccCcchhheeeeEec----CCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCcccccc
Confidence 369999999997643 23567899999999999988753211
Q ss_pred ----------------------hhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccccCCceeeCCCCceEecccccc
Q 042634 224 ----------------------ALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLA 281 (427)
Q Consensus 224 ----------------------~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a 281 (427)
....+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~~ivHrDikp~Nill~~~~~vkL~DfG~a 220 (337)
T cd05054 144 SSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLA 220 (337)
T ss_pred ccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEeCCCcEEEeccccc
Confidence 0135889999999999999999999 899999999999999999999999999999
Q ss_pred cccCCc--------CCCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhcccchhc
Q 042634 282 KFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLTLHNFVKEALPERLAE 352 (427)
Q Consensus 282 ~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 352 (427)
+.+... ..++..|+|||++.+..++.++|||||||++|||++ |..||.+....+ .+..........
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-~~~~~~~~~~~~---- 295 (337)
T cd05054 221 RDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-EFCRRLKEGTRM---- 295 (337)
T ss_pred hhcccCcchhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-HHHHHHhccCCC----
Confidence 875322 134567999999999999999999999999999998 999997532111 111111100000
Q ss_pred ccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHH
Q 042634 353 IVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQLLSFRN 419 (427)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~L~~~~~ 419 (427)
..+...+.++.+++.+||+.+|++|||++|+++.|+++.+
T Consensus 296 ---------------------------~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 296 ---------------------------RAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred ---------------------------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0112234568999999999999999999999999998765
No 57
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-34 Score=278.00 Aligned_cols=181 Identities=25% Similarity=0.299 Sum_probs=150.8
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecc
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrD 259 (427)
+||.++.++.. |+...+.+.||||+.|||+..+.+. ..|++..++-++..|+.||+||| ++|||+||
T Consensus 427 ~HPFL~~L~~~-----fQT~~~l~fvmey~~Ggdm~~~~~~-----~~F~e~rarfyaAev~l~L~fLH---~~~IIYRD 493 (694)
T KOG0694|consen 427 RHPFLVNLFSC-----FQTKEHLFFVMEYVAGGDLMHHIHT-----DVFSEPRARFYAAEVVLGLQFLH---ENGIIYRD 493 (694)
T ss_pred cCCeEeecccc-----cccCCeEEEEEEecCCCcEEEEEec-----ccccHHHHHHHHHHHHHHHHHHH---hcCceeee
Confidence 79999999988 6678899999999999996655543 34999999999999999999999 99999999
Q ss_pred ccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 260 LKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 260 lkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
||.+|||+|.+|++||+|||+++.... .-+||+.|+|||++.+..|+.++|+|||||+||||+.|..||.+...
T Consensus 494 lKLdNiLLD~eGh~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddE 573 (694)
T KOG0694|consen 494 LKLDNLLLDTEGHVKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDE 573 (694)
T ss_pred cchhheEEcccCcEEecccccccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCH
Confidence 999999999999999999999996431 12899999999999999999999999999999999999999986321
Q ss_pred CCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 334 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
.. +.|..+..+ ..-|..++.+..++|++++..+|++|--+
T Consensus 574 --ee---------------~FdsI~~d~-----------------~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 574 --EE---------------VFDSIVNDE-----------------VRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred --HH---------------HHHHHhcCC-----------------CCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 11 111111110 01234467788999999999999999765
No 58
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2.7e-34 Score=268.47 Aligned_cols=195 Identities=22% Similarity=0.287 Sum_probs=152.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|++++++++.+.. +...++||||+++|+|.+++..... ..+++..+..++.|++.||+||| +.||+||
T Consensus 57 l~~~~iv~~~~~~~~-----~~~~~lv~e~~~~g~L~~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~ 126 (285)
T cd05631 57 VNSRFVVSLAYAYET-----KDALCLVLTIMNGGDLKFHIYNMGN--PGFDEQRAIFYAAELCCGLEDLQ---RERIVYR 126 (285)
T ss_pred cCCCcEEEEEEEEcc-----CCeEEEEEEecCCCcHHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCEEeC
Confidence 469999999887543 5678999999999999887754321 35889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
||||+||++++++.+||+|||+++..... ..|+..|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 127 dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~ 206 (285)
T cd05631 127 DLKPENILLDDRGHIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKE 206 (285)
T ss_pred CCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCc
Confidence 99999999999999999999999875432 3688999999999999999999999999999999999999975321
Q ss_pred CCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC-----HH
Q 042634 334 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN-----ME 408 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt-----~~ 408 (427)
.. ....+.......... .+...+.++.+++++||+.||++||| ++
T Consensus 207 ~~--~~~~~~~~~~~~~~~----------------------------~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~ 256 (285)
T cd05631 207 RV--KREEVDRRVKEDQEE----------------------------YSEKFSEDAKSICRMLLTKNPKERLGCRGNGAA 256 (285)
T ss_pred ch--hHHHHHHHhhccccc----------------------------CCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHH
Confidence 11 111111110000000 11223456889999999999999997 78
Q ss_pred HHHHH
Q 042634 409 EVAAQ 413 (427)
Q Consensus 409 ev~~~ 413 (427)
|++++
T Consensus 257 ~~~~h 261 (285)
T cd05631 257 GVKQH 261 (285)
T ss_pred HHhcC
Confidence 88874
No 59
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=3.5e-34 Score=268.51 Aligned_cols=203 Identities=29% Similarity=0.467 Sum_probs=160.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh------------hhhccCHHHHHHHHHHHHHHHHH
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE------------ALKNLNLLQRLSIAVDVASALDY 246 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~~~~~i~~~L~~ 246 (427)
++||||+++++.+.. ....++||||+++++|.+++..... ....+++..++.++.|++.|++|
T Consensus 64 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~ 138 (291)
T cd05094 64 LQHEHIVKFYGVCGD-----GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVY 138 (291)
T ss_pred CCCCCcceEEEEEcc-----CCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 579999999998543 5568999999999999999864321 11348899999999999999999
Q ss_pred HhhcCCCCeeeccccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCCCCcCccccchhHHHHH
Q 042634 247 LHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILL 318 (427)
Q Consensus 247 LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl 318 (427)
|| ++||+||||||+||+++.++.+||+|||.++..... ..++..|+|||++.+..++.++|||||||++
T Consensus 139 lH---~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 215 (291)
T cd05094 139 LA---SQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVIL 215 (291)
T ss_pred HH---hCCeeecccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHH
Confidence 99 899999999999999999999999999999764322 2456789999999999999999999999999
Q ss_pred HHHHh-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcC
Q 042634 319 LETFT-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCS 397 (427)
Q Consensus 319 ~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl 397 (427)
|||++ |+.||...... ............ ..+..++..+.+++.+||
T Consensus 216 ~el~t~g~~p~~~~~~~-----~~~~~~~~~~~~----------------------------~~~~~~~~~~~~li~~~l 262 (291)
T cd05094 216 WEIFTYGKQPWFQLSNT-----EVIECITQGRVL----------------------------ERPRVCPKEVYDIMLGCW 262 (291)
T ss_pred HHHHhCCCCCCCCCCHH-----HHHHHHhCCCCC----------------------------CCCccCCHHHHHHHHHHc
Confidence 99998 99998653111 111110000000 011224567899999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHH
Q 042634 398 SELPRERMNMEEVAAQLLSFRNKLV 422 (427)
Q Consensus 398 ~~dP~~Rpt~~ev~~~L~~~~~~~~ 422 (427)
+.+|++|||++||++.|+++.+..+
T Consensus 263 ~~~P~~Rpt~~~v~~~l~~~~~~~~ 287 (291)
T cd05094 263 QREPQQRLNIKEIYKILHALGKATP 287 (291)
T ss_pred ccChhhCcCHHHHHHHHHHHHhhcC
Confidence 9999999999999999999976543
No 60
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=4.7e-34 Score=272.55 Aligned_cols=141 Identities=25% Similarity=0.358 Sum_probs=124.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. +...++||||+++|+|.+++... ..+++..+..++.|++.||.|||+ ..+|+||
T Consensus 60 l~h~~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~--~~~ivH~ 128 (331)
T cd06649 60 CNSPYIVGFYGAFYS-----DGEISICMEHMDGGSLDQVLKEA----KRIPEEILGKVSIAVLRGLAYLRE--KHQIMHR 128 (331)
T ss_pred CCCCCCCeEEEEEEE-----CCEEEEEeecCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHhh--cCCEEcC
Confidence 579999999998543 56789999999999999998654 348899999999999999999993 2469999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
||||+||+++.++.+||+|||+++..... ..++..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 129 dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 129 DVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred CCChhhEEEcCCCcEEEccCcccccccccccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999765432 2688899999999999999999999999999999999999964
No 61
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-35 Score=269.56 Aligned_cols=190 Identities=22% Similarity=0.297 Sum_probs=155.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+++||.++|+.+.. +...+++||||.||++.+.++... .+.+..+..+++++..|+.|+| .++.+||
T Consensus 68 ~~~~~it~yygsyl~-----g~~LwiiMey~~gGsv~~lL~~~~----~~~E~~i~~ilre~l~~l~ylH---~~~kiHr 135 (467)
T KOG0201|consen 68 CDSPNITEYYGSYLK-----GTKLWIIMEYCGGGSVLDLLKSGN----ILDEFEIAVILREVLKGLDYLH---SEKKIHR 135 (467)
T ss_pred cCcchHHhhhhheee-----cccHHHHHHHhcCcchhhhhccCC----CCccceeeeehHHHHHHhhhhh---hcceecc
Confidence 456999999998543 678999999999999999997653 3578888889999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
|||+.||++..+|.+|++|||++..+... .+||+.|||||++.+..|+.|+||||+|++.+||.+|.+|+....
T Consensus 136 DIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~h 215 (467)
T KOG0201|consen 136 DIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLH 215 (467)
T ss_pred cccccceeEeccCcEEEEecceeeeeechhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccC
Confidence 99999999999999999999999876543 389999999999999999999999999999999999999997642
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
. +.+.-.+.+..|+. ....+...+.+++..|++.||+.||||.++++
T Consensus 216 P--mrvlflIpk~~PP~-------------------------------L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 216 P--MRVLFLIPKSAPPR-------------------------------LDGDFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred c--ceEEEeccCCCCCc-------------------------------cccccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 2 00000011111111 11135566899999999999999999999987
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
+
T Consensus 263 h 263 (467)
T KOG0201|consen 263 H 263 (467)
T ss_pred h
Confidence 4
No 62
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.6e-34 Score=276.61 Aligned_cols=224 Identities=21% Similarity=0.256 Sum_probs=152.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++++...........++||||| +++|.+++... ..+++..+..++.|++.||+||| +.||+||
T Consensus 56 l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~ 127 (338)
T cd07859 56 LRHPDIVEIKHIMLPPSRREFKDIYVVFELM-ESDLHQVIKAN----DDLTPEHHQFFLYQLLRALKYIH---TANVFHR 127 (338)
T ss_pred CCCCCEeeecceEeccCCCCCceEEEEEecC-CCCHHHHHHhc----ccCCHHHHHHHHHHHHHHHHHHH---HCCeecC
Confidence 5799999999886543333334579999999 57898888654 34899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC---------cCCCccccccccccCC--CCcCccccchhHHHHHHHHHhCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE---------ATNNFFNFQIAEYGMG--SEVSTSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~---------~~~~~~~y~aPE~~~~--~~~~~~~DiwS~G~vl~ell~g~~p 327 (427)
||||+|||++.++.+||+|||+++.... ...++..|+|||++.+ ..++.++|||||||++|||++|+.|
T Consensus 128 dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~p 207 (338)
T cd07859 128 DLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPL 207 (338)
T ss_pred CCCHHHeEECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999985422 1267889999999865 6789999999999999999999999
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
|.+... ......+................ ..........................+..+.+++.+||+.||++|||+
T Consensus 208 f~~~~~--~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~ 284 (338)
T cd07859 208 FPGKNV--VHQLDLITDLLGTPSPETISRVR-NEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTA 284 (338)
T ss_pred CCCCCh--HHHHHHHHHHhCCCCHHHHHHhh-hhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCH
Confidence 975321 11111111111000000000000 000000000000000000000001234567899999999999999999
Q ss_pred HHHHHH
Q 042634 408 EEVAAQ 413 (427)
Q Consensus 408 ~ev~~~ 413 (427)
+|++++
T Consensus 285 ~e~l~h 290 (338)
T cd07859 285 EEALAD 290 (338)
T ss_pred HHHhcC
Confidence 999864
No 63
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=5.6e-34 Score=263.56 Aligned_cols=202 Identities=18% Similarity=0.252 Sum_probs=159.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. ....++++||+++|+|.+++.........+++..+..++.|++.||+||| +.|++||
T Consensus 59 l~h~~i~~~~~~~~~-----~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~ 130 (267)
T cd08228 59 LNHPNVIKYLDSFIE-----DNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMH---SRRVMHR 130 (267)
T ss_pred CCCcceeeeeeeEEE-----CCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCC
Confidence 469999999987543 45789999999999999888543322245888999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.++|+|||.+...... ..++..|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus 131 dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~ 210 (267)
T cd08228 131 DIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK 210 (267)
T ss_pred CCCHHHEEEcCCCCEEECccccceeccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccc
Confidence 99999999999999999999998875432 257788999999988889999999999999999999999986432
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
.....+...+.... . +.......+..+.+++.+||+.+|++|||++||++
T Consensus 211 ~~~~~~~~~~~~~~--------~----------------------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~ 260 (267)
T cd08228 211 MNLFSLCQKIEQCD--------Y----------------------PPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQ 260 (267)
T ss_pred ccHHHHHHHHhcCC--------C----------------------CCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHH
Confidence 11111111111000 0 00122345677899999999999999999999999
Q ss_pred HHHHHH
Q 042634 413 QLLSFR 418 (427)
Q Consensus 413 ~L~~~~ 418 (427)
.+++++
T Consensus 261 ~~~~~~ 266 (267)
T cd08228 261 IAKQMH 266 (267)
T ss_pred HHHHhc
Confidence 998864
No 64
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=4e-34 Score=258.08 Aligned_cols=231 Identities=19% Similarity=0.263 Sum_probs=161.9
Q ss_pred Cccccccc-chhhhccccccC-CCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCC
Q 042634 176 NNFIRHRN-LVKIITSCASVD-FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCET 253 (427)
Q Consensus 176 N~ll~Hpn-iv~~~~~~~~~~-~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~ 253 (427)
++-++|+| ||.+.+++.... +......++|+||+ ..+|.+++.........++...++.+++||+.||+||| ++
T Consensus 64 lk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H---~~ 139 (323)
T KOG0594|consen 64 LKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLH---SH 139 (323)
T ss_pred HHHhCCCcceEEEEeeeeecccccccceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHH---hC
Confidence 44477888 999999876633 12233678999999 77999998765432235777899999999999999999 99
Q ss_pred CeeeccccCCceeeCCCCceEecccccccccCCcC------CCccccccccccCCC-CcCccccchhHHHHHHHHHhCCC
Q 042634 254 PIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT------NNFFNFQIAEYGMGS-EVSTSGDVYSFGILLLETFTGKR 326 (427)
Q Consensus 254 ~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~------~~~~~y~aPE~~~~~-~~~~~~DiwS~G~vl~ell~g~~ 326 (427)
+|+||||||+|||++++|.+||+|||+|+...-.. ..|..|+|||++.+. .|+..+||||+|||++||+++++
T Consensus 140 ~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~ 219 (323)
T KOG0594|consen 140 GILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRP 219 (323)
T ss_pred CeecccCCcceEEECCCCcEeeeccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCC
Confidence 99999999999999999999999999999765222 678899999999886 68999999999999999999999
Q ss_pred CCCcccCCCccHHHHHHH-hcc--cchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCC
Q 042634 327 PTNEMFTGNLTLHNFVKE-ALP--ERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRE 403 (427)
Q Consensus 327 pf~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~ 403 (427)
.|.+....+ .+....+. ..| ..+..+.. .......+..+......... .+.......+++.+|++++|.+
T Consensus 220 LFpG~se~~-ql~~If~~lGtP~e~~Wp~v~~----~~~~k~~f~~~~~~~~l~~~--~~~~~~~~~dll~~~L~y~p~~ 292 (323)
T KOG0594|consen 220 LFPGDSEID-QLFRIFRLLGTPNEKDWPGVSS----LPDYKAPFPKWPGPKDLSSI--LPKLDPDGIELLSKLLQYDPAK 292 (323)
T ss_pred CCCCCcHHH-HHHHHHHHcCCCCccCCCCccc----cccccccCcCCCCccchHHh--ccccCccHHHHHHHHhccCccc
Confidence 998754311 11111111 111 11111110 00000000000000000000 0111146889999999999999
Q ss_pred CCCHHHHHHH--HHHH
Q 042634 404 RMNMEEVAAQ--LLSF 417 (427)
Q Consensus 404 Rpt~~ev~~~--L~~~ 417 (427)
|.|++.++.+ +..+
T Consensus 293 R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 293 RISAKGALTHPYFSEL 308 (323)
T ss_pred CcCHHHHhcChhhccc
Confidence 9999999886 4444
No 65
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.5e-34 Score=276.26 Aligned_cols=194 Identities=25% Similarity=0.425 Sum_probs=165.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||||++|+++.+.. +....+|+|.+..|+|+.|.++. +.+....++.|++||++||.|||++ ..+|+||
T Consensus 98 L~H~NIirfy~SW~d~~---n~~in~iTEL~TSGtLr~Y~kk~----~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHR 169 (632)
T KOG0584|consen 98 LKHPNIIRFYDSWVDTD---NKTINFITELFTSGTLREYRKKH----RRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHR 169 (632)
T ss_pred CCCCceeeeeeheecCC---CceeeeeeecccCCcHHHHHHHh----ccCCHHHHHHHHHHHHHHhhhhhcC-CCCcccc
Confidence 78999999999987743 35578899999999999999877 4588899999999999999999986 6899999
Q ss_pred cccCCceeeCCC-CceEecccccccccCCcC----CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 259 DLKPSNVLLDGE-LTAHVGDFGLAKFLPEAT----NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 259 Dlkp~NIll~~~-~~~kL~DFG~a~~~~~~~----~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
|||.+||+|+++ |.|||+|.|+|+...... .||+.|||||++. ..|+..+||||||++|.||+|+..||.....
T Consensus 170 DLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n 248 (632)
T KOG0584|consen 170 DLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTN 248 (632)
T ss_pred ccccceEEEcCCcCceeecchhHHHHhhccccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCC
Confidence 999999999765 899999999999876654 8999999999987 8899999999999999999999999987655
Q ss_pred CCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 042634 334 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQ 413 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~ 413 (427)
....+.+...+.-|..+..+-| .++.++|.+|+.. ..+|||+.|+++.
T Consensus 249 ~AQIYKKV~SGiKP~sl~kV~d-------------------------------Pevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 249 PAQIYKKVTSGIKPAALSKVKD-------------------------------PEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred HHHHHHHHHcCCCHHHhhccCC-------------------------------HHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 5555555554444555444443 3478899999999 9999999999863
No 66
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=275.74 Aligned_cols=189 Identities=23% Similarity=0.278 Sum_probs=152.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. +...++||||+++|+|.+++... ..+++..+..++.|++.||+||| +.||+||
T Consensus 75 l~hp~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~ 142 (329)
T PTZ00263 75 LSHPFIVNMMCSFQD-----ENRVYFLLEFVVGGELFTHLRKA----GRFPNDVAKFYHAELVLAFEYLH---SKDIIYR 142 (329)
T ss_pred CCCCCCCcEEEEEEc-----CCEEEEEEcCCCCChHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeec
Confidence 579999999988543 56789999999999999988754 35888999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC---CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT---NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGN 335 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~---~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~~ 335 (427)
||||+|||++.++.+||+|||+++...... .|++.|+|||++.+..++.++|||||||++|||++|+.||.+...
T Consensus 143 dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~-- 220 (329)
T PTZ00263 143 DLKPENLLLDNKGHVKVTDFGFAKKVPDRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP-- 220 (329)
T ss_pred CCCHHHEEECCCCCEEEeeccCceEcCCCcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH--
Confidence 999999999999999999999998765433 688999999999999999999999999999999999999965311
Q ss_pred ccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC-----HHHH
Q 042634 336 LTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN-----MEEV 410 (427)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt-----~~ev 410 (427)
.+......... .. .+...+.++.+++.+||+.||++||+ ++|+
T Consensus 221 ---~~~~~~i~~~~--------~~---------------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l 268 (329)
T PTZ00263 221 ---FRIYEKILAGR--------LK---------------------FPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADV 268 (329)
T ss_pred ---HHHHHHHhcCC--------cC---------------------CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHH
Confidence 11111110000 00 01112345789999999999999997 6777
Q ss_pred HHH
Q 042634 411 AAQ 413 (427)
Q Consensus 411 ~~~ 413 (427)
+.+
T Consensus 269 l~h 271 (329)
T PTZ00263 269 KNH 271 (329)
T ss_pred hcC
Confidence 654
No 67
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1e-35 Score=289.14 Aligned_cols=197 Identities=22% Similarity=0.423 Sum_probs=167.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+|||||++-++... .....||.|||++|+|+.+|+.+. ..|++.+...|++.||.|++||- +.++|||
T Consensus 687 FdHPNIIrLEGVVTk-----s~PvMIiTEyMENGsLDsFLR~~D---GqftviQLVgMLrGIAsGMkYLs---dm~YVHR 755 (996)
T KOG0196|consen 687 FDHPNIIRLEGVVTK-----SKPVMIITEYMENGSLDSFLRQND---GQFTVIQLVGMLRGIASGMKYLS---DMNYVHR 755 (996)
T ss_pred CCCCcEEEEEEEEec-----CceeEEEhhhhhCCcHHHHHhhcC---CceEeehHHHHHHHHHHHhHHHh---hcCchhh
Confidence 679999999999554 567889999999999999998876 44999999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC---------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT---------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPT 328 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~---------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf 328 (427)
||.++|||++.+..+|++|||+++.+.++. .-...|.|||.+.-.+++.++|||||||||||.++ |..||
T Consensus 756 DLAARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPY 835 (996)
T KOG0196|consen 756 DLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 835 (996)
T ss_pred hhhhhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcc
Confidence 999999999999999999999999886544 12357999999999999999999999999999887 99999
Q ss_pred CcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 329 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
-++.+.+ ..+.+.. ..+...|.+||..+++||..||+.|-.+||+|.
T Consensus 836 WdmSNQd--VIkaIe~-------------------------------gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~ 882 (996)
T KOG0196|consen 836 WDMSNQD--VIKAIEQ-------------------------------GYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFA 882 (996)
T ss_pred cccchHH--HHHHHHh-------------------------------ccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHH
Confidence 7753221 1111111 112226778999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 042634 409 EVAAQLLSFRN 419 (427)
Q Consensus 409 ev~~~L~~~~~ 419 (427)
||+..|.++..
T Consensus 883 qiV~~lDklIr 893 (996)
T KOG0196|consen 883 QIVSTLDKLIR 893 (996)
T ss_pred HHHHHHHHHhc
Confidence 99999999854
No 68
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=4.1e-34 Score=267.43 Aligned_cols=216 Identities=20% Similarity=0.224 Sum_probs=152.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||++++.+..+.... ..+++..++.++.|++.||+||| +.||+||
T Consensus 57 l~h~~iv~~~~~~~~-----~~~~~lv~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~ 124 (287)
T cd07848 57 LKQENIVELKEAFRR-----RGKLYLVFEYVEKNMLELLEEMP----NGVPPEKVRSYIYQLIKAIHWCH---KNDIVHR 124 (287)
T ss_pred CCCccccchhhhEec-----CCEEEEEEecCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecC
Confidence 579999999988543 56789999999887665543322 35889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||+||+++.++.+||+|||+++..... ..++..|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 125 dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~ 204 (287)
T cd07848 125 DIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGE 204 (287)
T ss_pred CCCHHHEEEcCCCcEEEeeccCcccccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999999875432 25788999999999888999999999999999999999999763
Q ss_pred cCCCccHHHHHH--Hhcccchhccc--CccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 332 FTGNLTLHNFVK--EALPERLAEIV--DPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 332 ~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
.... ....... ...+....... ++.......... ..............+.++.+++.+||+.||++|||+
T Consensus 205 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~ 278 (287)
T cd07848 205 SEID-QLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAV-----NHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLT 278 (287)
T ss_pred CHHH-HHHHHHHhhCCCCHHHHHhhhccchhcccccCcc-----cCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCH
Confidence 2111 1111110 00111000000 000000000000 000000000112245679999999999999999999
Q ss_pred HHHHH
Q 042634 408 EEVAA 412 (427)
Q Consensus 408 ~ev~~ 412 (427)
+|+++
T Consensus 279 ~~~l~ 283 (287)
T cd07848 279 EQCLN 283 (287)
T ss_pred HHHhc
Confidence 99986
No 69
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.6e-34 Score=276.19 Aligned_cols=189 Identities=23% Similarity=0.264 Sum_probs=152.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. +...++||||+++|+|.+++... ..+++..+..++.|++.||+||| +.||+||
T Consensus 88 l~hp~Iv~~~~~~~~-----~~~~~lv~Ey~~~g~L~~~i~~~----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHr 155 (340)
T PTZ00426 88 INHPFCVNLYGSFKD-----ESYLYLVLEFVIGGEFFTFLRRN----KRFPNDVGCFYAAQIVLIFEYLQ---SLNIVYR 155 (340)
T ss_pred CCCCCCcceEEEEEe-----CCEEEEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEcc
Confidence 579999999998543 56789999999999999998754 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC---CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT---NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGN 335 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~---~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~~ 335 (427)
||||+|||++.++.+||+|||+++...... .||+.|+|||++.+..++.++|||||||++|||++|..||.....
T Consensus 156 DLkp~NILl~~~~~ikL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-- 233 (340)
T PTZ00426 156 DLKPENLLLDKDGFIKMTDFGFAKVVDTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEP-- 233 (340)
T ss_pred CCCHHHEEECCCCCEEEecCCCCeecCCCcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCH--
Confidence 999999999999999999999998765432 688999999999998899999999999999999999999975311
Q ss_pred ccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC-----CHHHH
Q 042634 336 LTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM-----NMEEV 410 (427)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp-----t~~ev 410 (427)
... ....... ... .+...+..+.+++.+|++.||++|+ |++|+
T Consensus 234 ~~~---~~~i~~~--------~~~---------------------~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~ 281 (340)
T PTZ00426 234 LLI---YQKILEG--------IIY---------------------FPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNV 281 (340)
T ss_pred HHH---HHHHhcC--------CCC---------------------CCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHH
Confidence 111 1110000 000 0111234578899999999999995 88888
Q ss_pred HHH
Q 042634 411 AAQ 413 (427)
Q Consensus 411 ~~~ 413 (427)
+++
T Consensus 282 ~~h 284 (340)
T PTZ00426 282 KEH 284 (340)
T ss_pred HcC
Confidence 764
No 70
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.7e-34 Score=275.19 Aligned_cols=194 Identities=21% Similarity=0.292 Sum_probs=150.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+||||+++++.+.. +...++||||+++|+|..++... ..+++..++.++.|++.||+||| +.||+||
T Consensus 53 ~~hp~iv~~~~~~~~-----~~~~~lv~E~~~~~~L~~~~~~~----~~l~~~~~~~i~~qi~~~l~~lH---~~~ivH~ 120 (329)
T cd05618 53 SNHPFLVGLHSCFQT-----ESRLFFVIEYVNGGDLMFHMQRQ----RKLPEEHARFYSAEISLALNYLH---ERGIIYR 120 (329)
T ss_pred CCCCcCCceeeEEEe-----CCEEEEEEeCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeC
Confidence 479999999987533 56789999999999998887544 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||+++.... ...|+..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 121 Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~ 200 (329)
T cd05618 121 DLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG 200 (329)
T ss_pred CCCHHHEEECCCCCEEEeeCCccccccCCCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCC
Confidence 9999999999999999999999975321 1267899999999999999999999999999999999999996431
Q ss_pred CCCc---cHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH--
Q 042634 333 TGNL---TLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM-- 407 (427)
Q Consensus 333 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~-- 407 (427)
.... ........... ... ...+...+.++.+++.+||+.||++|||+
T Consensus 201 ~~~~~~~~~~~~~~~~i~-------~~~---------------------~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~ 252 (329)
T cd05618 201 SSDNPDQNTEDYLFQVIL-------EKQ---------------------IRIPRSLSVKAASVLKSFLNKDPKERLGCHP 252 (329)
T ss_pred CcCCcccccHHHHHHHHh-------cCC---------------------CCCCCCCCHHHHHHHHHHhcCCHHHcCCCCC
Confidence 1111 11111111000 000 00122234567899999999999999984
Q ss_pred ----HHHHH
Q 042634 408 ----EEVAA 412 (427)
Q Consensus 408 ----~ev~~ 412 (427)
+|+++
T Consensus 253 ~~~~~~i~~ 261 (329)
T cd05618 253 QTGFADIQG 261 (329)
T ss_pred CCCHHHHhc
Confidence 56654
No 71
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=2.4e-34 Score=272.88 Aligned_cols=197 Identities=21% Similarity=0.371 Sum_probs=157.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ...++++||+++|+|.+++.... ..+++..+..++.||+.||+||| +.||+||
T Consensus 66 l~h~niv~~~g~~~~------~~~~~v~e~~~~g~l~~~l~~~~---~~~~~~~~~~~~~qi~~~L~~LH---~~~iiH~ 133 (316)
T cd05108 66 VDNPHVCRLLGICLT------STVQLITQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQIAKGMNYLE---ERRLVHR 133 (316)
T ss_pred CCCCCCCeEEEEEcC------CCceeeeecCCCCCHHHHHHhcc---ccCCHHHHHHHHHHHHHHHHHHH---hcCeecc
Confidence 579999999998643 24679999999999999987643 35888899999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC--------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT--------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~--------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~ 329 (427)
||||+||+++.++.+||+|||+++...... ..+..|+|||++....++.++|||||||++||+++ |+.||.
T Consensus 134 dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~ 213 (316)
T cd05108 134 DLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 213 (316)
T ss_pred ccchhheEecCCCcEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCC
Confidence 999999999999999999999998764322 23567999999999999999999999999999997 999986
Q ss_pred cccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 330 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
+.... .+......... ...+..++.++.+++.+||+.+|++|||+.|
T Consensus 214 ~~~~~--~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~ 260 (316)
T cd05108 214 GIPAS--EISSILEKGER-------------------------------LPQPPICTIDVYMIMVKCWMIDADSRPKFRE 260 (316)
T ss_pred CCCHH--HHHHHHhCCCC-------------------------------CCCCCCCCHHHHHHHHHHccCChhhCcCHHH
Confidence 53111 11111110000 0011224456889999999999999999999
Q ss_pred HHHHHHHHHHH
Q 042634 410 VAAQLLSFRNK 420 (427)
Q Consensus 410 v~~~L~~~~~~ 420 (427)
++..+.++.++
T Consensus 261 l~~~l~~~~~~ 271 (316)
T cd05108 261 LIIEFSKMARD 271 (316)
T ss_pred HHHHHHHHHcC
Confidence 99999988654
No 72
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=5.1e-34 Score=266.98 Aligned_cols=202 Identities=27% Similarity=0.459 Sum_probs=159.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccch---------hhhhccCHHHHHHHHHHHHHHHHHHhh
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNR---------EALKNLNLLQRLSIAVDVASALDYLHH 249 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---------~~~~~l~~~~~~~~~~~i~~~L~~LH~ 249 (427)
++|||++++++.+.. ....++||||+++++|.+++.... .....+++..++.++.|++.||+|||
T Consensus 64 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH- 137 (288)
T cd05093 64 LQHEHIVKFYGVCVE-----GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLA- 137 (288)
T ss_pred CCCCCcceEEEEEec-----CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH-
Confidence 479999999988543 567899999999999999886432 11134899999999999999999999
Q ss_pred cCCCCeeeccccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCCCCcCccccchhHHHHHHHH
Q 042634 250 YCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLET 321 (427)
Q Consensus 250 ~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~el 321 (427)
.+|++||||||+||++++++.+||+|||.++..... ..++..|+|||++.+..++.++|||||||++|||
T Consensus 138 --~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l 215 (288)
T cd05093 138 --SQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEI 215 (288)
T ss_pred --hCCeeecccCcceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHH
Confidence 899999999999999999999999999999865322 1345679999999988999999999999999999
Q ss_pred Hh-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCC
Q 042634 322 FT-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSEL 400 (427)
Q Consensus 322 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~d 400 (427)
++ |..||...... ............. .+..++.++.+++.+||+.|
T Consensus 216 ~t~g~~p~~~~~~~-----~~~~~i~~~~~~~----------------------------~~~~~~~~l~~li~~~l~~~ 262 (288)
T cd05093 216 FTYGKQPWYQLSNN-----EVIECITQGRVLQ----------------------------RPRTCPKEVYDLMLGCWQRE 262 (288)
T ss_pred HhCCCCCCCCCCHH-----HHHHHHHcCCcCC----------------------------CCCCCCHHHHHHHHHHccCC
Confidence 98 89998653211 1111100000000 01123456899999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHH
Q 042634 401 PRERMNMEEVAAQLLSFRNKL 421 (427)
Q Consensus 401 P~~Rpt~~ev~~~L~~~~~~~ 421 (427)
|.+|||+.|+.+.|+.+.+.-
T Consensus 263 p~~Rpt~~~v~~~l~~~~~~~ 283 (288)
T cd05093 263 PHMRLNIKEIHSLLQNLAKAS 283 (288)
T ss_pred hhhCCCHHHHHHHHHHHHHhc
Confidence 999999999999999998763
No 73
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=3.2e-34 Score=271.79 Aligned_cols=187 Identities=21% Similarity=0.290 Sum_probs=149.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+||||+++++.+. .+...++||||+++|+|..++... ..+++..+..++.|++.||+||| +.||+||
T Consensus 53 ~~hp~i~~~~~~~~-----~~~~~~lv~e~~~gg~L~~~~~~~----~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~ 120 (316)
T cd05592 53 WEHPFLTHLFCTFQ-----TKEHLFFVMEYLNGGDLMFHIQSS----GRFDEARARFYAAEIICGLQFLH---KKGIIYR 120 (316)
T ss_pred cCCCCccceeeEEE-----cCCEEEEEEcCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeC
Confidence 47999999988743 356789999999999999888654 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||+|+.... ...||..|+|||++.+..++.++|||||||++|||++|+.||.+..
T Consensus 121 dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~ 200 (316)
T cd05592 121 DLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGED 200 (316)
T ss_pred CCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999999999975422 1268899999999999999999999999999999999999997531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH-HHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME-EVA 411 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~-ev~ 411 (427)
. .+........ .+ ..+..++.++.+++.+||+.||++||++. +++
T Consensus 201 ~-----~~~~~~i~~~------~~-----------------------~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 201 E-----DELFDSILND------RP-----------------------HFPRWISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred H-----HHHHHHHHcC------CC-----------------------CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 1 1111110000 00 01122345678999999999999999976 444
No 74
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=4.4e-34 Score=266.68 Aligned_cols=207 Identities=29% Similarity=0.419 Sum_probs=157.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. ..+...+++|||+++++|.+++... .+++.++..++.|++.||+||| +.||+||
T Consensus 63 l~h~~i~~~~~~~~~---~~~~~~~lv~e~~~~~~l~~~~~~~-----~l~~~~~~~i~~~l~~~l~~lH---~~~i~H~ 131 (283)
T cd05080 63 LYHENIVKYKGCCSE---QGGKGLQLIMEYVPLGSLRDYLPKH-----KLNLAQLLLFAQQICEGMAYLH---SQHYIHR 131 (283)
T ss_pred CCCCCEeeEEEEEec---CCCceEEEEecCCCCCCHHHHHHHc-----CCCHHHHHHHHHHHHHHHHHHH---HCCeecc
Confidence 579999999987543 1234578999999999999988543 4899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC---------CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT---------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~---------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~ 329 (427)
||||+||+++.++.+||+|||+++...... .++..|+|||...+..++.++|||||||++|||++|..||.
T Consensus 132 dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~ 211 (283)
T cd05080 132 DLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQ 211 (283)
T ss_pred ccChheEEEcCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCC
Confidence 999999999999999999999998654321 34557999999988889999999999999999999999986
Q ss_pred cccCCCccHHHHHHHhcc----cchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC
Q 042634 330 EMFTGNLTLHNFVKEALP----ERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM 405 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp 405 (427)
..... +......... ..+.+..+.. .....+..++.++.+++.+||+.+|++||
T Consensus 212 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~li~~cl~~~p~~Rp 269 (283)
T cd05080 212 SPPKK---FEEMIGPKQGQMTVVRLIELLERG-------------------MRLPCPKNCPQEVYILMKNCWETEAKFRP 269 (283)
T ss_pred CCcch---hhhhhcccccccchhhhhhhhhcC-------------------CCCCCCCCCCHHHHHHHHHHhccChhhCC
Confidence 43211 1111100000 0000000000 00001234567899999999999999999
Q ss_pred CHHHHHHHHHHHH
Q 042634 406 NMEEVAAQLLSFR 418 (427)
Q Consensus 406 t~~ev~~~L~~~~ 418 (427)
|++++++.|+++.
T Consensus 270 s~~~i~~~l~~~~ 282 (283)
T cd05080 270 TFRSLIPILKEMH 282 (283)
T ss_pred CHHHHHHHHHHhh
Confidence 9999999999875
No 75
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.2e-34 Score=243.70 Aligned_cols=191 Identities=23% Similarity=0.292 Sum_probs=161.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++|+.+.+ ....|+++||.++|+++..++..+. ..+++.....+++|+|.|+.|+| .++|+||
T Consensus 79 L~hpnilrlY~~fhd-----~~riyLilEya~~gel~k~L~~~~~--~~f~e~~~a~Yi~q~A~Al~y~h---~k~VIhR 148 (281)
T KOG0580|consen 79 LRHPNILRLYGYFHD-----SKRIYLILEYAPRGELYKDLQEGRM--KRFDEQRAATYIKQLANALLYCH---LKRVIHR 148 (281)
T ss_pred cCCccHHhhhhheec-----cceeEEEEEecCCchHHHHHHhccc--ccccccchhHHHHHHHHHHHHhc---cCCcccC
Confidence 789999999999544 6789999999999999999985544 66999999999999999999999 9999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC----CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT----NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTG 334 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~----~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~ 334 (427)
||||+|+|++.++.+||+|||-+...+.+. +||.-|.+||...+..++.++|+|++|++.||++.|.+||.... .
T Consensus 149 diKpenlLlg~~~~lkiAdfGwsV~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~-~ 227 (281)
T KOG0580|consen 149 DIKPENLLLGSAGELKIADFGWSVHAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS-H 227 (281)
T ss_pred CCCHHHhccCCCCCeeccCCCceeecCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh-h
Confidence 999999999999999999999998765443 89999999999999999999999999999999999999998653 2
Q ss_pred CccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 042634 335 NLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQ 413 (427)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~ 413 (427)
...+.+..+..+ ..+...+..+.+++.+|+..+|.+|.+..|+++.
T Consensus 228 ~etYkrI~k~~~---------------------------------~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 228 SETYKRIRKVDL---------------------------------KFPSTISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred HHHHHHHHHccc---------------------------------cCCcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 222222111110 0223345668899999999999999999999864
No 76
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=7.4e-34 Score=261.42 Aligned_cols=194 Identities=24% Similarity=0.403 Sum_probs=154.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ...++||||+++++|.+++.... ..+++..++.++.|++.||+||| .+|++||
T Consensus 52 l~h~~ii~~~~~~~~------~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~ 119 (257)
T cd05115 52 LDNPYIVRMIGVCEA------EALMLVMEMASGGPLNKFLSGKK---DEITVSNVVELMHQVSMGMKYLE---GKNFVHR 119 (257)
T ss_pred cCCCCeEEEEEEEcC------CCeEEEEEeCCCCCHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHH---hcCeeec
Confidence 479999999987532 35789999999999999886433 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC---------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT---------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPT 328 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~---------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf 328 (427)
||||+||+++.++.+||+|||+++...... .++..|+|||++....++.++|||||||++||+++ |..||
T Consensus 120 dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~ 199 (257)
T cd05115 120 DLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPY 199 (257)
T ss_pred ccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCc
Confidence 999999999999999999999997553321 22467999999988889999999999999999996 99999
Q ss_pred CcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 329 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
...... .....+....+ ...+..++.++.+++.+||+.+|++||++.
T Consensus 200 ~~~~~~--~~~~~~~~~~~-------------------------------~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~ 246 (257)
T cd05115 200 KKMKGP--EVMSFIEQGKR-------------------------------LDCPAECPPEMYALMKDCWIYKWEDRPNFA 246 (257)
T ss_pred CcCCHH--HHHHHHHCCCC-------------------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHH
Confidence 754211 11111111000 001223467789999999999999999999
Q ss_pred HHHHHHHHH
Q 042634 409 EVAAQLLSF 417 (427)
Q Consensus 409 ev~~~L~~~ 417 (427)
+|.+.|+.+
T Consensus 247 ~i~~~l~~~ 255 (257)
T cd05115 247 KVEERMRTY 255 (257)
T ss_pred HHHHHHhhh
Confidence 999999865
No 77
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=3.1e-34 Score=272.79 Aligned_cols=189 Identities=20% Similarity=0.258 Sum_probs=151.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. +...++||||+++|+|..++... ..+++..++.++.|++.||+||| +.||+||
T Consensus 52 l~hp~i~~~~~~~~~-----~~~~~lv~E~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~ 119 (323)
T cd05595 52 TRHPFLTALKYAFQT-----HDRLCFVMEYANGGELFFHLSRE----RVFTEERARFYGAEIVSALEYLH---SRDVVYR 119 (323)
T ss_pred CCCCCCcceeeEEec-----CCEEEEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEec
Confidence 579999999887533 56789999999999998887654 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+|||++.++.+||+|||+++.... ...|+..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 120 Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~ 199 (323)
T cd05595 120 DIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 199 (323)
T ss_pred CCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999999999875322 1258899999999999999999999999999999999999996531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC-----CH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM-----NM 407 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp-----t~ 407 (427)
. ............ . .+...+.++.+++.+||+.||++|| ++
T Consensus 200 ~-----~~~~~~~~~~~~----~-------------------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~ 245 (323)
T cd05595 200 H-----ERLFELILMEEI----R-------------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDA 245 (323)
T ss_pred H-----HHHHHHHhcCCC----C-------------------------CCCCCCHHHHHHHHHHccCCHHHhCCCCCCCH
Confidence 1 111111100000 0 1122345688999999999999998 88
Q ss_pred HHHHHH
Q 042634 408 EEVAAQ 413 (427)
Q Consensus 408 ~ev~~~ 413 (427)
.|++++
T Consensus 246 ~~~l~h 251 (323)
T cd05595 246 KEVMEH 251 (323)
T ss_pred HHHHcC
Confidence 888753
No 78
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=3.1e-34 Score=273.31 Aligned_cols=189 Identities=22% Similarity=0.255 Sum_probs=151.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++.+.+. .+...++||||+++|+|..++... ..+++.++..++.||+.||+||| +.||+||
T Consensus 52 l~hp~iv~~~~~~~-----~~~~~~lv~Ey~~~g~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHr 119 (328)
T cd05593 52 TRHPFLTSLKYSFQ-----TKDRLCFVMEYVNGGELFFHLSRE----RVFSEDRTRFYGAEIVSALDYLH---SGKIVYR 119 (328)
T ss_pred CCCCCCcceEEEEE-----cCCEEEEEEeCCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEec
Confidence 57999999987743 356789999999999998887654 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+|||++.++.+||+|||+++..... ..|+..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 120 Dikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~ 199 (328)
T cd05593 120 DLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 199 (328)
T ss_pred ccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCC
Confidence 99999999999999999999998754221 258899999999999999999999999999999999999996531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC-----CH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM-----NM 407 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp-----t~ 407 (427)
..+.......... . .+...+.++.+++.+||+.||++|| ++
T Consensus 200 -----~~~~~~~~~~~~~------------------------~-----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~ 245 (328)
T cd05593 200 -----HEKLFELILMEDI------------------------K-----FPRTLSADAKSLLSGLLIKDPNKRLGGGPDDA 245 (328)
T ss_pred -----HHHHHHHhccCCc------------------------c-----CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCH
Confidence 1111111110000 0 1122345678999999999999997 89
Q ss_pred HHHHHH
Q 042634 408 EEVAAQ 413 (427)
Q Consensus 408 ~ev~~~ 413 (427)
.|++++
T Consensus 246 ~~il~h 251 (328)
T cd05593 246 KEIMRH 251 (328)
T ss_pred HHHhcC
Confidence 998864
No 79
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=3.2e-34 Score=271.81 Aligned_cols=187 Identities=21% Similarity=0.257 Sum_probs=149.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+||+|+++++.+. .+...++||||+++|+|.+++... ..+++..+..++.|++.||+||| +.||+||
T Consensus 53 ~~~~~i~~~~~~~~-----~~~~~~lv~E~~~~g~L~~~i~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivHr 120 (316)
T cd05620 53 WENPFLTHLYCTFQ-----TKEHLFFVMEFLNGGDLMFHIQDK----GRFDLYRATFYAAEIVCGLQFLH---SKGIIYR 120 (316)
T ss_pred cCCCCccCeeEEEE-----eCCEEEEEECCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEec
Confidence 47999999998753 356789999999999999888654 35889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||+++.... ...|+..|+|||++.+..++.++||||+||++|||++|+.||....
T Consensus 121 Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~ 200 (316)
T cd05620 121 DLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDD 200 (316)
T ss_pred CCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999999999875321 2268899999999999999999999999999999999999997531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH-HHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME-EVA 411 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~-ev~ 411 (427)
.....+.+....+ . .+...+.++.+++.+||+.||++|||+. ++.
T Consensus 201 --~~~~~~~~~~~~~---------~-----------------------~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 201 --EDELFESIRVDTP---------H-----------------------YPRWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred --HHHHHHHHHhCCC---------C-----------------------CCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 1111111110000 0 0111345678999999999999999985 554
No 80
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=6.8e-34 Score=276.81 Aligned_cols=199 Identities=28% Similarity=0.402 Sum_probs=156.7
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhh-----------------------------------
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREA----------------------------------- 224 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~----------------------------------- 224 (427)
.||||+++++.+.. ....++|||||++|+|.+++......
T Consensus 99 ~HpnIv~l~~~~~~-----~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (400)
T cd05105 99 PHLNIVNLLGACTK-----SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFEN 173 (400)
T ss_pred CCCCeeeEEEEEcc-----CCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcc
Confidence 59999999998644 56789999999999999887543210
Q ss_pred ---------------------------------------------------------hhccCHHHHHHHHHHHHHHHHHH
Q 042634 225 ---------------------------------------------------------LKNLNLLQRLSIAVDVASALDYL 247 (427)
Q Consensus 225 ---------------------------------------------------------~~~l~~~~~~~~~~~i~~~L~~L 247 (427)
...+++..+..++.|++.||+||
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~L 253 (400)
T cd05105 174 KGDYMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFL 253 (400)
T ss_pred cccccccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH
Confidence 12478888999999999999999
Q ss_pred hhcCCCCeeeccccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCCCCcCccccchhHHHHHH
Q 042634 248 HHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLL 319 (427)
Q Consensus 248 H~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ 319 (427)
| ..+|+||||||+||+++.++.+||+|||+++..... ..++..|+|||.+.+..++.++|||||||++|
T Consensus 254 H---~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ 330 (400)
T cd05105 254 A---SKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLW 330 (400)
T ss_pred H---hCCeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHH
Confidence 9 899999999999999999999999999999865322 13556799999999889999999999999999
Q ss_pred HHHh-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCC
Q 042634 320 ETFT-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSS 398 (427)
Q Consensus 320 ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~ 398 (427)
||++ |..||........ +...+..... ...+..++.++.+++.+||+
T Consensus 331 ellt~g~~P~~~~~~~~~-~~~~~~~~~~-------------------------------~~~~~~~~~~l~~li~~cl~ 378 (400)
T cd05105 331 EIFSLGGTPYPGMIVDST-FYNKIKSGYR-------------------------------MAKPDHATQEVYDIMVKCWN 378 (400)
T ss_pred HHHHCCCCCCcccchhHH-HHHHHhcCCC-------------------------------CCCCccCCHHHHHHHHHHCc
Confidence 9997 9999875421111 1111100000 00122356678999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHH
Q 042634 399 ELPRERMNMEEVAAQLLSFR 418 (427)
Q Consensus 399 ~dP~~Rpt~~ev~~~L~~~~ 418 (427)
.||++|||+.+|.+.|+++.
T Consensus 379 ~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 379 SEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred cCHhHCcCHHHHHHHHHHHc
Confidence 99999999999999999864
No 81
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=1.5e-34 Score=266.39 Aligned_cols=193 Identities=34% Similarity=0.543 Sum_probs=148.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++|+||+++|+|.+++..... ..+++..+..++.||+.||.||| +.+++|+
T Consensus 58 l~h~ni~~~~g~~~~-----~~~~~lv~e~~~~g~L~~~L~~~~~--~~~~~~~~~~i~~~i~~~l~~Lh---~~~iiH~ 127 (259)
T PF07714_consen 58 LRHPNIVKLYGFCIE-----NEPLFLVMEYCPGGSLDDYLKSKNK--EPLSEQQRLSIAIQIAEALSYLH---SNNIIHG 127 (259)
T ss_dssp HSBTTBE-EEEEEES-----SSSEEEEEE--TTEBHHHHHHHTCT--TTSBHHHHHHHHHHHHHHHHHHH---HTTEEES
T ss_pred ccccccccccccccc-----ccccccccccccccccccccccccc--ccccccccccccccccccccccc---ccccccc
Confidence 489999999999763 4458999999999999999976522 45899999999999999999999 8899999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~ 329 (427)
||+++||+++.++.+||+|||+++..... ......|+|||.+....++.++||||||+++||+++ |+.||.
T Consensus 128 ~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~ 207 (259)
T PF07714_consen 128 NLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFS 207 (259)
T ss_dssp T-SGGGEEEETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999876321 245568999999988889999999999999999999 788886
Q ss_pred cccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 330 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
.. ....+...+..... ...+..++..+.+++.+||+.||++||||.|
T Consensus 208 ~~--~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~ 254 (259)
T PF07714_consen 208 DY--DNEEIIEKLKQGQR-------------------------------LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQE 254 (259)
T ss_dssp TS--CHHHHHHHHHTTEE-------------------------------TTSBTTSBHHHHHHHHHHT-SSGGGS--HHH
T ss_pred cc--cccccccccccccc-------------------------------ceeccchhHHHHHHHHHHcCCChhhCcCHHH
Confidence 54 11111111111100 0022335667899999999999999999999
Q ss_pred HHHHH
Q 042634 410 VAAQL 414 (427)
Q Consensus 410 v~~~L 414 (427)
+++.|
T Consensus 255 i~~~L 259 (259)
T PF07714_consen 255 ILQEL 259 (259)
T ss_dssp HHHHH
T ss_pred HHhcC
Confidence 99886
No 82
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=3.3e-34 Score=273.32 Aligned_cols=194 Identities=21% Similarity=0.299 Sum_probs=150.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+||||+++++.+.. ....++||||+++|+|.+++... ..+++..++.++.|++.||+||| +.||+||
T Consensus 53 ~~hp~Iv~~~~~~~~-----~~~~~lv~e~~~~g~L~~~~~~~----~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~ 120 (329)
T cd05588 53 SNHPFLVGLHSCFQT-----ESRLFFVIEFVSGGDLMFHMQRQ----RKLPEEHARFYSAEISLALNFLH---ERGIIYR 120 (329)
T ss_pred cCCCCCCceEEEEEc-----CCEEEEEEeCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEec
Confidence 369999999987533 56789999999999998887544 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||+++.... ...|+..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 121 dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~ 200 (329)
T cd05588 121 DLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG 200 (329)
T ss_pred CCCHHHeEECCCCCEEECcCccccccccCCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCccccc
Confidence 9999999999999999999999875321 1267889999999999999999999999999999999999997432
Q ss_pred CCC---ccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC---
Q 042634 333 TGN---LTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN--- 406 (427)
Q Consensus 333 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt--- 406 (427)
... ............ .... ..+...+.++.+++.+||+.||.+|||
T Consensus 201 ~~~~~~~~~~~~~~~~~~-------~~~~---------------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~ 252 (329)
T cd05588 201 MSDNPDQNTEDYLFQVIL-------EKQI---------------------RIPRSLSVKASSVLKGFLNKDPKERLGCHP 252 (329)
T ss_pred ccccccccchHHHHHHHH-------cCCC---------------------CCCCCCCHHHHHHHHHHhccCHHHcCCCCC
Confidence 111 001111111000 0000 011223456889999999999999998
Q ss_pred ---HHHHHH
Q 042634 407 ---MEEVAA 412 (427)
Q Consensus 407 ---~~ev~~ 412 (427)
++|+++
T Consensus 253 ~~~~~~i~~ 261 (329)
T cd05588 253 QTGFRDIKS 261 (329)
T ss_pred CCCHHHHhc
Confidence 566654
No 83
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=3.3e-34 Score=272.25 Aligned_cols=183 Identities=23% Similarity=0.257 Sum_probs=147.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+||||+++++.+. .....++||||+++|+|.+++... ..+++..+..++.|++.||+||| +.||+||
T Consensus 53 ~~h~~iv~~~~~~~-----~~~~~~iv~Ey~~~g~L~~~i~~~----~~l~~~~~~~~~~ql~~~L~~lH---~~~ivH~ 120 (320)
T cd05590 53 RNHPFLTQLYCCFQ-----TPDRLFFVMEFVNGGDLMFHIQKS----RRFDEARARFYAAEITSALMFLH---DKGIIYR 120 (320)
T ss_pred cCCCchhceeeEEE-----cCCEEEEEEcCCCCchHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeC
Confidence 36999999998743 356789999999999999888654 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||+++.... ...|++.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 121 dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~ 200 (320)
T cd05590 121 DLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAEN 200 (320)
T ss_pred CCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCC
Confidence 9999999999999999999999875321 1268899999999999999999999999999999999999997531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
. ............ . .+...+.++.+++.+||+.||++||++
T Consensus 201 ~-----~~~~~~i~~~~~---~--------------------------~~~~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 201 E-----DDLFEAILNDEV---V--------------------------YPTWLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred H-----HHHHHHHhcCCC---C--------------------------CCCCCCHHHHHHHHHHcccCHHHCCCC
Confidence 1 111111110000 0 111234567899999999999999998
No 84
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1e-33 Score=260.51 Aligned_cols=193 Identities=26% Similarity=0.381 Sum_probs=154.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+. ....++||||+++|+|.+++... ..+++..+..++.|++.||+|+| ++||+||
T Consensus 53 l~h~~i~~~~~~~~------~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~ 119 (257)
T cd05116 53 LDNPYIVRMIGICE------AESWMLVMELAELGPLNKFLQKN----KHVTEKNITELVHQVSMGMKYLE---ETNFVHR 119 (257)
T ss_pred CCCCCcceEEEEEc------CCCcEEEEecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCEeec
Confidence 57999999988753 24568999999999999998654 35889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC---------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT---------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPT 328 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~---------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf 328 (427)
||||.||+++.++.+||+|||.++...... .++..|+|||.+....++.++|||||||++||+++ |..||
T Consensus 120 dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~ 199 (257)
T cd05116 120 DLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPY 199 (257)
T ss_pred ccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCC
Confidence 999999999999999999999998654321 23468999999988889999999999999999998 99999
Q ss_pred CcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 329 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
..... ....+.+...... ..+..++.++.+++.+||+.||++|||++
T Consensus 200 ~~~~~--~~~~~~i~~~~~~-------------------------------~~~~~~~~~l~~li~~~~~~~p~~Rp~~~ 246 (257)
T cd05116 200 KGMKG--NEVTQMIESGERM-------------------------------ECPQRCPPEMYDLMKLCWTYGVDERPGFA 246 (257)
T ss_pred CCCCH--HHHHHHHHCCCCC-------------------------------CCCCCCCHHHHHHHHHHhccCchhCcCHH
Confidence 75321 1111111110000 01123456789999999999999999999
Q ss_pred HHHHHHHHH
Q 042634 409 EVAAQLLSF 417 (427)
Q Consensus 409 ev~~~L~~~ 417 (427)
+|.+.|+.+
T Consensus 247 ~i~~~l~~~ 255 (257)
T cd05116 247 VVELRLRNY 255 (257)
T ss_pred HHHHHHhcc
Confidence 999999864
No 85
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=4.2e-34 Score=269.58 Aligned_cols=221 Identities=18% Similarity=0.257 Sum_probs=149.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+ .++|.+++.... ..+++..+..++.|++.||+||| +.||+||
T Consensus 60 l~h~niv~~~~~~~~-----~~~~~lv~e~~-~~~l~~~~~~~~---~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~ 127 (303)
T cd07869 60 LKHANIVLLHDIIHT-----KETLTLVFEYV-HTDLCQYMDKHP---GGLHPENVKLFLFQLLRGLSYIH---QRYILHR 127 (303)
T ss_pred CCCCCcCeEEEEEec-----CCeEEEEEECC-CcCHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecC
Confidence 579999999988543 56789999999 578887775443 45888999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||+||+++.++.+||+|||+++.... ...++..|+|||++.+ ..++.++||||+||++|||++|..||.+.
T Consensus 128 dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 207 (303)
T cd07869 128 DLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGM 207 (303)
T ss_pred CCCHHHEEECCCCCEEECCCCcceeccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999999875432 2367788999999865 45889999999999999999999999764
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
......+........... ...................................+..+.+++.+|++.||++|||++|++
T Consensus 208 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l 286 (303)
T cd07869 208 KDIQDQLERIFLVLGTPN-EDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAAL 286 (303)
T ss_pred ccHHHHHHHHHHHhCCCC-hhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHh
Confidence 221111111111110000 0000000000000000000000000000000011235678999999999999999999998
Q ss_pred H
Q 042634 412 A 412 (427)
Q Consensus 412 ~ 412 (427)
+
T Consensus 287 ~ 287 (303)
T cd07869 287 S 287 (303)
T ss_pred c
Confidence 6
No 86
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-34 Score=276.27 Aligned_cols=192 Identities=23% Similarity=0.314 Sum_probs=156.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhcc--CHHHHHHHHHHHHHHHHHHhhcCCCCee
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNL--NLLQRLSIAVDVASALDYLHHYCETPIV 256 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l--~~~~~~~~~~~i~~~L~~LH~~~~~~iv 256 (427)
++|.|||+++|++.. +...-|.||-++||+|.++++..- .++ .+.++-.+.+||++||+||| +..||
T Consensus 629 LrHkNIVrYLGs~se-----nGf~kIFMEqVPGGSLSsLLrskW---GPlKDNEstm~fYtkQILeGLkYLH---en~IV 697 (1226)
T KOG4279|consen 629 LRHKNIVRYLGSVSE-----NGFFKIFMEQVPGGSLSSLLRSKW---GPLKDNESTMNFYTKQILEGLKYLH---ENKIV 697 (1226)
T ss_pred HhhHhHHHHhhccCC-----CCeEEEEeecCCCCcHHHHHHhcc---CCCccchhHHHHHHHHHHHHhhhhh---hccee
Confidence 789999999999544 677889999999999999997543 455 67888899999999999999 99999
Q ss_pred eccccCCceeeC-CCCceEecccccccccCC------cCCCccccccccccCCC--CcCccccchhHHHHHHHHHhCCCC
Q 042634 257 HCDLKPSNVLLD-GELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGS--EVSTSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 257 HrDlkp~NIll~-~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~--~~~~~~DiwS~G~vl~ell~g~~p 327 (427)
|||||.+|||++ -.|.+||+|||.++.+.. ...||..|||||++..+ .|+.++|||||||++.||.||++|
T Consensus 698 HRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPP 777 (1226)
T KOG4279|consen 698 HRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPP 777 (1226)
T ss_pred eccccCCcEEEeeccceEEecccccchhhccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCC
Confidence 999999999995 579999999999987633 23899999999999764 589999999999999999999999
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
|.........+.+. ..+. .....|++...+...++.+|+.+||.+||++
T Consensus 778 F~ElgspqAAMFkV--GmyK-----------------------------vHP~iPeelsaeak~FilrcFepd~~~R~sA 826 (1226)
T KOG4279|consen 778 FVELGSPQAAMFKV--GMYK-----------------------------VHPPIPEELSAEAKNFILRCFEPDPCDRPSA 826 (1226)
T ss_pred eeecCChhHhhhhh--ccee-----------------------------cCCCCcHHHHHHHHHHHHHHcCCCcccCccH
Confidence 98652221111110 0000 0112567788889999999999999999999
Q ss_pred HHHHH
Q 042634 408 EEVAA 412 (427)
Q Consensus 408 ~ev~~ 412 (427)
.++++
T Consensus 827 ~~LL~ 831 (1226)
T KOG4279|consen 827 KDLLQ 831 (1226)
T ss_pred HHhcc
Confidence 99875
No 87
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=8.4e-34 Score=264.43 Aligned_cols=197 Identities=21% Similarity=0.253 Sum_probs=152.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++.+.+.. +...++||||+++|+|..++.........+++..++.++.|++.||+||| +.||+||
T Consensus 50 l~~~~i~~~~~~~~~-----~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~ 121 (280)
T cd05608 50 VHSRFIVSLAYAFQT-----KTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLH---QRRIIYR 121 (280)
T ss_pred CCCCcEeeeeEEEcC-----CCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccC
Confidence 579999999877433 56789999999999998877432222245899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||.++..... ..|+..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 122 dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~ 201 (280)
T cd05608 122 DLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARG 201 (280)
T ss_pred CCCHHHEEECCCCCEEEeeCccceecCCCCccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999999765432 267889999999999999999999999999999999999997532
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC-----CH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM-----NM 407 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp-----t~ 407 (427)
... ............. ...+...+.++.+++.+||+.||++|| |+
T Consensus 202 ~~~-~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ 251 (280)
T cd05608 202 EKV-ENKELKQRILNDS-----------------------------VTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNC 251 (280)
T ss_pred cch-hHHHHHHhhcccC-----------------------------CCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCH
Confidence 111 1111111100000 001223456688999999999999999 67
Q ss_pred HHHHHH
Q 042634 408 EEVAAQ 413 (427)
Q Consensus 408 ~ev~~~ 413 (427)
+|++++
T Consensus 252 ~~~l~h 257 (280)
T cd05608 252 DGLRTH 257 (280)
T ss_pred HHHhcC
Confidence 777764
No 88
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-34 Score=271.53 Aligned_cols=203 Identities=23% Similarity=0.400 Sum_probs=164.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||||+++++|.. ++..++++|||++|+|.+++..+... .+......+|+.||+.|++||. +.++|||
T Consensus 592 LkhPNIveLvGVC~~-----DePicmI~EYmEnGDLnqFl~aheap--t~~t~~~vsi~tqiasgmaYLe---s~nfVHr 661 (807)
T KOG1094|consen 592 LKHPNIVELLGVCVQ-----DDPLCMITEYMENGDLNQFLSAHELP--TAETAPGVSICTQIASGMAYLE---SLNFVHR 661 (807)
T ss_pred cCCCCeeEEEeeeec-----CCchHHHHHHHhcCcHHHHHHhccCc--ccccchhHHHHHHHHHHHHHHH---hhchhhc
Confidence 689999999999977 56889999999999999999876431 1455677889999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC--------CCccccccccccCCCCcCccccchhHHHHHHHHHh--CCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT--------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT--GKRPT 328 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~--------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~--g~~pf 328 (427)
|+.+.|||+++++++||+|||.++-+..+. +-+..|||+|.+...+++.++|||+||+++||+++ ...||
T Consensus 662 d~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py 741 (807)
T KOG1094|consen 662 DLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPY 741 (807)
T ss_pred cccccceeecCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCch
Confidence 999999999999999999999999665443 44578999999999999999999999999999876 78898
Q ss_pred CcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 329 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
....++ ...+-....++..-... -...|.-|+.+++++|.+||..|-++|||++
T Consensus 742 ~~lt~e--~vven~~~~~~~~~~~~------------------------~l~~P~~cp~~lyelml~Cw~~es~~RPsFe 795 (807)
T KOG1094|consen 742 SQLTDE--QVVENAGEFFRDQGRQV------------------------VLSRPPACPQGLYELMLRCWRRESEQRPSFE 795 (807)
T ss_pred hhhhHH--HHHHhhhhhcCCCCcce------------------------eccCCCcCcHHHHHHHHHHhchhhhcCCCHH
Confidence 765221 11111122122111111 1114566899999999999999999999999
Q ss_pred HHHHHHHHH
Q 042634 409 EVAAQLLSF 417 (427)
Q Consensus 409 ev~~~L~~~ 417 (427)
++...|++.
T Consensus 796 ~lh~~lq~~ 804 (807)
T KOG1094|consen 796 QLHLFLQED 804 (807)
T ss_pred HHHHHHHHh
Confidence 999988764
No 89
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.2e-33 Score=260.43 Aligned_cols=196 Identities=24% Similarity=0.422 Sum_probs=155.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. ....+++|||+++++|.+++..... ..+++..++.++.|++.||+||| ..+++||
T Consensus 58 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~LH---~~~i~H~ 127 (261)
T cd05072 58 LQHDKLVRLYAVVTK-----EEPIYIITEYMAKGSLLDFLKSDEG--GKVLLPKLIDFSAQIAEGMAYIE---RKNYIHR 127 (261)
T ss_pred CCCCCeeeEEEEEcC-----CCCcEEEEecCCCCcHHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecc
Confidence 579999999887433 5568999999999999999865422 45888899999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC-------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT-------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~-------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~ 330 (427)
||||+||+++.++.+||+|||.++...... .++..|+|||++....++.++|||||||++|||++ |..||..
T Consensus 128 dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~ 207 (261)
T cd05072 128 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPG 207 (261)
T ss_pred ccchhhEEecCCCcEEECCCccceecCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCC
Confidence 999999999999999999999998764322 34567999999988889999999999999999998 9999865
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
.... .....+....+. .....++.++.+++.+||+.+|++|||++++
T Consensus 208 ~~~~--~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i 254 (261)
T cd05072 208 MSNS--DVMSALQRGYRM-------------------------------PRMENCPDELYDIMKTCWKEKAEERPTFDYL 254 (261)
T ss_pred CCHH--HHHHHHHcCCCC-------------------------------CCCCCCCHHHHHHHHHHccCCcccCcCHHHH
Confidence 3111 111111100000 0111245668999999999999999999999
Q ss_pred HHHHHHH
Q 042634 411 AAQLLSF 417 (427)
Q Consensus 411 ~~~L~~~ 417 (427)
.+.|+++
T Consensus 255 ~~~l~~~ 261 (261)
T cd05072 255 QSVLDDF 261 (261)
T ss_pred HHHHhcC
Confidence 9999863
No 90
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2.3e-34 Score=273.95 Aligned_cols=189 Identities=21% Similarity=0.261 Sum_probs=150.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCC-CCeee
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCE-TPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~-~~ivH 257 (427)
++||||+++.+.+. .+...++||||+++|+|.+++... ..+++..+..++.||+.||+||| + .||+|
T Consensus 52 ~~hp~i~~~~~~~~-----~~~~~~lv~E~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~lH---~~~~ivH 119 (325)
T cd05594 52 SRHPFLTALKYSFQ-----THDRLCFVMEYANGGELFFHLSRE----RVFSEDRARFYGAEIVSALDYLH---SEKNVVY 119 (325)
T ss_pred CCCCCCCceEEEEE-----cCCEEEEEEeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hcCCEEe
Confidence 57999999988743 356789999999999998887654 35899999999999999999999 6 79999
Q ss_pred ccccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
|||||+|||++.++.+||+|||+++.... ...|+..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 120 rDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~ 199 (325)
T cd05594 120 RDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 199 (325)
T ss_pred cCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCC
Confidence 99999999999999999999999875322 125889999999999999999999999999999999999999653
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC-----C
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM-----N 406 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp-----t 406 (427)
.. ............ . .+...+.++.+++.+||+.||++|+ +
T Consensus 200 ~~-----~~~~~~i~~~~~------------------------~-----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~ 245 (325)
T cd05594 200 DH-----EKLFELILMEEI------------------------R-----FPRTLSPEAKSLLSGLLKKDPKQRLGGGPDD 245 (325)
T ss_pred CH-----HHHHHHHhcCCC------------------------C-----CCCCCCHHHHHHHHHHhhcCHHHhCCCCCCC
Confidence 11 111111100000 0 1112345688999999999999996 8
Q ss_pred HHHHHHH
Q 042634 407 MEEVAAQ 413 (427)
Q Consensus 407 ~~ev~~~ 413 (427)
+.|++++
T Consensus 246 ~~~il~h 252 (325)
T cd05594 246 AKEIMQH 252 (325)
T ss_pred HHHHhcC
Confidence 9998764
No 91
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=7.5e-34 Score=265.86 Aligned_cols=218 Identities=19% Similarity=0.239 Sum_probs=150.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||++ |+|.+++.... ..+++..+..++.||+.||+||| +.||+||
T Consensus 60 l~h~niv~~~~~~~~-----~~~~~lv~e~~~-~~l~~~l~~~~---~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~ 127 (288)
T cd07871 60 LKHANIVTLHDIIHT-----ERCLTLVFEYLD-SDLKQYLDNCG---NLMSMHNVKIFMFQLLRGLSYCH---KRKILHR 127 (288)
T ss_pred CCCCCEeeEEEEEcC-----CCeEEEEEeCCC-cCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---hCCcccC
Confidence 579999999987533 456899999996 58988875432 34788999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||+|||++.++.+||+|||+++.... ...++..|+|||++.+ ..++.++||||+||++|||++|+.||.+.
T Consensus 128 dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~ 207 (288)
T cd07871 128 DLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGS 207 (288)
T ss_pred CCCHHHEEECCCCCEEECcCcceeeccCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999999976432 2256889999999875 56899999999999999999999999753
Q ss_pred cCCCccHHHHHHHhcccchhcccCcccccccccc-chhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEG-ETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
... ..+.... ........+............. ....... .... ......+.+..+++.+|+++||.+|||++|+
T Consensus 208 ~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~ 282 (288)
T cd07871 208 TVK-EELHLIF-RLLGTPTEETWPGITSNEEFRSYLFPQYRA-QPLI--NHAPRLDTDGIDLLSSLLLYETKSRISAEAA 282 (288)
T ss_pred CHH-HHHHHHH-HHhCCCChHHhhccccchhhhccccCccCC-CchH--HhCCCCCHHHHHHHHHhcCcCcccCCCHHHH
Confidence 211 1111111 1111100111100000000000 0000000 0000 0011234567899999999999999999999
Q ss_pred HHH
Q 042634 411 AAQ 413 (427)
Q Consensus 411 ~~~ 413 (427)
+++
T Consensus 283 l~h 285 (288)
T cd07871 283 LRH 285 (288)
T ss_pred hcC
Confidence 853
No 92
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.6e-33 Score=268.99 Aligned_cols=141 Identities=24% Similarity=0.354 Sum_probs=124.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. +...++||||+++|+|.+++... ..+++..+..++.|++.||.|||+ ..+|+||
T Consensus 60 l~h~~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~l~~~l~~lH~--~~~ivH~ 128 (333)
T cd06650 60 CNSPYIVGFYGAFYS-----DGEISICMEHMDGGSLDQVLKKA----GRIPEQILGKVSIAVIKGLTYLRE--KHKIMHR 128 (333)
T ss_pred CCCCcccceeEEEEE-----CCEEEEEEecCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHh--cCCEEec
Confidence 579999999998654 56789999999999999998654 348889999999999999999993 2579999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
||||+||+++.++.+||+|||++...... ..++..|+|||++.+..++.++|||||||++||+++|+.||..
T Consensus 129 dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 129 DVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred CCChhhEEEcCCCCEEEeeCCcchhhhhhccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 99999999999999999999999765332 2678899999999988899999999999999999999999975
No 93
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=7e-34 Score=269.44 Aligned_cols=188 Identities=23% Similarity=0.316 Sum_probs=149.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+||||+++++.+.. +...++||||+++|+|.+++... ..+++.++..++.|++.||+||| +.||+||
T Consensus 53 ~~hp~iv~~~~~~~~-----~~~~~lv~ey~~~g~L~~~l~~~----~~~~~~~~~~~~~qi~~al~~LH---~~~ivHr 120 (316)
T cd05619 53 WEHPFLTHLYCTFQT-----KENLFFVMEYLNGGDLMFHIQSC----HKFDLPRATFYAAEIICGLQFLH---SKGIVYR 120 (316)
T ss_pred cCCCcCcceEEEEEe-----CCEEEEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeC
Confidence 579999999988543 56789999999999999988654 34889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||+++.... ...|+..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 121 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~ 200 (316)
T cd05619 121 DLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHD 200 (316)
T ss_pred CCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999999999875321 1267889999999999999999999999999999999999997531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH-HHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME-EVA 411 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~-ev~ 411 (427)
. ....+.+... .+. .+...+.++.+++.+||+.||++||++. ++.
T Consensus 201 ~--~~~~~~i~~~---------~~~-----------------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 201 E--EELFQSIRMD---------NPC-----------------------YPRWLTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred H--HHHHHHHHhC---------CCC-----------------------CCccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 1 1111111000 000 1112345678999999999999999997 554
Q ss_pred H
Q 042634 412 A 412 (427)
Q Consensus 412 ~ 412 (427)
+
T Consensus 247 ~ 247 (316)
T cd05619 247 Q 247 (316)
T ss_pred c
Confidence 3
No 94
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.4e-33 Score=264.54 Aligned_cols=198 Identities=24% Similarity=0.432 Sum_probs=156.6
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccch------------hhhhccCHHHHHHHHHHHHHHHHHH
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNR------------EALKNLNLLQRLSIAVDVASALDYL 247 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~------------~~~~~l~~~~~~~~~~~i~~~L~~L 247 (427)
+||||+++++.+.. +...+++|||+++|+|.++++... .....+++..++.++.|++.||+||
T Consensus 74 ~h~~i~~~~~~~~~-----~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~L 148 (293)
T cd05053 74 KHKNIINLLGVCTQ-----EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFL 148 (293)
T ss_pred CCCCeeeEEEEEcC-----CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHH
Confidence 69999999988543 456899999999999999986421 1224688999999999999999999
Q ss_pred hhcCCCCeeeccccCCceeeCCCCceEecccccccccCCcC--------CCccccccccccCCCCcCccccchhHHHHHH
Q 042634 248 HHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT--------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLL 319 (427)
Q Consensus 248 H~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~--------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ 319 (427)
| +.||+||||||+||+++.++.+||+|||.++...... .++..|+|||++.+..++.++|||||||++|
T Consensus 149 H---~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 225 (293)
T cd05053 149 A---SKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLW 225 (293)
T ss_pred H---HCCccccccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHH
Confidence 9 8999999999999999999999999999998654321 3446799999998889999999999999999
Q ss_pred HHHh-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCC
Q 042634 320 ETFT-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSS 398 (427)
Q Consensus 320 ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~ 398 (427)
|+++ |..||...... ...+....... ...+..++.++.+++.+||+
T Consensus 226 el~~~g~~p~~~~~~~--~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~li~~~l~ 272 (293)
T cd05053 226 EIFTLGGSPYPGIPVE--ELFKLLKEGYR-------------------------------MEKPQNCTQELYHLMRDCWH 272 (293)
T ss_pred HHhcCCCCCCCCCCHH--HHHHHHHcCCc-------------------------------CCCCCCCCHHHHHHHHHHcc
Confidence 9997 99998653110 11111000000 00112345678999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHH
Q 042634 399 ELPRERMNMEEVAAQLLSFR 418 (427)
Q Consensus 399 ~dP~~Rpt~~ev~~~L~~~~ 418 (427)
.||++|||+.|+++.|+++.
T Consensus 273 ~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 273 EVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred cCcccCcCHHHHHHHHHHhh
Confidence 99999999999999999874
No 95
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=2e-33 Score=264.13 Aligned_cols=202 Identities=25% Similarity=0.357 Sum_probs=157.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh------------hhhccCHHHHHHHHHHHHHHHHH
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE------------ALKNLNLLQRLSIAVDVASALDY 246 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~~~~~i~~~L~~ 246 (427)
.+||||+++++.+.. ....+++|||+++++|.+++..... ....+++..++.++.|++.||+|
T Consensus 60 ~~hp~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~ 134 (297)
T cd05089 60 GHHPNIINLLGACEN-----RGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQY 134 (297)
T ss_pred cCCCchhheEEEEcc-----CCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHH
Confidence 369999999987543 4568999999999999999864321 11348889999999999999999
Q ss_pred HhhcCCCCeeeccccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHH
Q 042634 247 LHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLET 321 (427)
Q Consensus 247 LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~el 321 (427)
|| ++||+||||||+||++++++.+||+|||++...... ...+..|+|||+..+..++.++|||||||++|||
T Consensus 135 lH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el 211 (297)
T cd05089 135 LS---EKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEI 211 (297)
T ss_pred HH---HCCcccCcCCcceEEECCCCeEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHH
Confidence 99 899999999999999999999999999998753221 1234569999999888899999999999999999
Q ss_pred Hh-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCC
Q 042634 322 FT-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSEL 400 (427)
Q Consensus 322 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~d 400 (427)
++ |..||..... .+........ . . ...+..++..+.+++.+||+.+
T Consensus 212 ~t~g~~pf~~~~~-----~~~~~~~~~~-~----~-----------------------~~~~~~~~~~~~~li~~~l~~~ 258 (297)
T cd05089 212 VSLGGTPYCGMTC-----AELYEKLPQG-Y----R-----------------------MEKPRNCDDEVYELMRQCWRDR 258 (297)
T ss_pred HcCCCCCCCCCCH-----HHHHHHHhcC-C----C-----------------------CCCCCCCCHHHHHHHHHHcCCC
Confidence 97 9999965311 1111110000 0 0 0011224567899999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHH
Q 042634 401 PRERMNMEEVAAQLLSFRNKL 421 (427)
Q Consensus 401 P~~Rpt~~ev~~~L~~~~~~~ 421 (427)
|.+|||++|+++.|+.+.++.
T Consensus 259 p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 259 PYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred hhhCcCHHHHHHHHHHHHHhh
Confidence 999999999999999987754
No 96
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.8e-33 Score=258.68 Aligned_cols=192 Identities=26% Similarity=0.436 Sum_probs=152.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. ....++||||+++|+|.+++.... ..+++..++.++.|++.||+||| ..||+||
T Consensus 56 l~h~~i~~~~~~~~~-----~~~~~iv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~ 124 (256)
T cd05114 56 LSHPKLVQLYGVCTQ-----QKPLYIVTEFMENGCLLNYLRQRQ---GKLSKDMLLSMCQDVCEGMEYLE---RNSFIHR 124 (256)
T ss_pred CCCCCceeEEEEEcc-----CCCEEEEEEcCCCCcHHHHHHhCc---cCCCHHHHHHHHHHHHHHHHHHH---HCCcccc
Confidence 479999999988543 456899999999999999886543 34889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC-------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT-------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~-------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~ 330 (427)
||||+||+++.++.+||+|||.++...... .++..|+|||++.+..++.++||||||+++||+++ |+.||..
T Consensus 125 dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~ 204 (256)
T cd05114 125 DLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEK 204 (256)
T ss_pred ccCcceEEEcCCCeEEECCCCCccccCCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCC
Confidence 999999999999999999999998653221 34457999999988889999999999999999999 8999865
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
... ......+...... ..+...+.++.+++.+||+.+|++|||++|+
T Consensus 205 ~~~--~~~~~~i~~~~~~-------------------------------~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l 251 (256)
T cd05114 205 KSN--YEVVEMISRGFRL-------------------------------YRPKLASMTVYEVMYSCWHEKPEGRPTFAEL 251 (256)
T ss_pred CCH--HHHHHHHHCCCCC-------------------------------CCCCCCCHHHHHHHHHHccCCcccCcCHHHH
Confidence 311 1111111100000 0011123568999999999999999999999
Q ss_pred HHHH
Q 042634 411 AAQL 414 (427)
Q Consensus 411 ~~~L 414 (427)
++.|
T Consensus 252 ~~~l 255 (256)
T cd05114 252 LRAI 255 (256)
T ss_pred HHhh
Confidence 9886
No 97
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=8.6e-34 Score=263.90 Aligned_cols=197 Identities=22% Similarity=0.376 Sum_probs=153.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhh------hhccCHHHHHHHHHHHHHHHHHHhhcCC
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREA------LKNLNLLQRLSIAVDVASALDYLHHYCE 252 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~------~~~l~~~~~~~~~~~i~~~L~~LH~~~~ 252 (427)
++||||+++++.+.. +...++||||+++|+|.+++...... ...+++..+..++.|++.||+||| +
T Consensus 66 l~~~~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~ 137 (277)
T cd05062 66 FNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN---A 137 (277)
T ss_pred CCCCCeeeEEEEEcC-----CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHH---H
Confidence 579999999988533 56789999999999999988643211 123577889999999999999999 8
Q ss_pred CCeeeccccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCCCCcCccccchhHHHHHHHHHh-
Q 042634 253 TPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT- 323 (427)
Q Consensus 253 ~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~- 323 (427)
.|++||||||+||++++++.+||+|||+++..... ..++..|+|||++.+..++.++|||||||++|||++
T Consensus 138 ~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~ 217 (277)
T cd05062 138 NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 217 (277)
T ss_pred CCcccCCcchheEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999998754321 134668999999998889999999999999999999
Q ss_pred CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCC
Q 042634 324 GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRE 403 (427)
Q Consensus 324 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~ 403 (427)
|..||.+... ......+.. ..... .+..++..+.+++.+||+.||++
T Consensus 218 ~~~p~~~~~~--~~~~~~~~~---~~~~~----------------------------~~~~~~~~~~~li~~~l~~~p~~ 264 (277)
T cd05062 218 AEQPYQGMSN--EQVLRFVME---GGLLD----------------------------KPDNCPDMLFELMRMCWQYNPKM 264 (277)
T ss_pred CCCCCCCCCH--HHHHHHHHc---CCcCC----------------------------CCCCCCHHHHHHHHHHcCCChhh
Confidence 7888865311 111111000 00000 11224567899999999999999
Q ss_pred CCCHHHHHHHHHH
Q 042634 404 RMNMEEVAAQLLS 416 (427)
Q Consensus 404 Rpt~~ev~~~L~~ 416 (427)
|||+.|+++.|++
T Consensus 265 Rps~~e~l~~l~~ 277 (277)
T cd05062 265 RPSFLEIISSIKE 277 (277)
T ss_pred CcCHHHHHHHhhC
Confidence 9999999998863
No 98
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=2.5e-33 Score=259.24 Aligned_cols=201 Identities=19% Similarity=0.262 Sum_probs=159.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. +...+++|||+++++|.+++.........+++..+..++.|++.||.||| +.|++|+
T Consensus 59 ~~h~~i~~~~~~~~~-----~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~ 130 (267)
T cd08229 59 LNHPNVIKYYASFIE-----DNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMH---SRRVMHR 130 (267)
T ss_pred ccCCchhhhhheeEe-----CCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecC
Confidence 579999999987543 55789999999999999988643222245899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||.+...... ..++..|+|||+..+..++.++||||||+++|||++|..||....
T Consensus 131 dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 210 (267)
T cd08229 131 DIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK 210 (267)
T ss_pred CCCHHHEEEcCCCCEEECcchhhhccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCccccc
Confidence 99999999999999999999998765432 257778999999988889999999999999999999999986432
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
.+ ....... ...... +.......+.++.+++.+||+.||++||||.+|++
T Consensus 211 ~~---~~~~~~~-----~~~~~~----------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 211 MN---LYSLCKK-----IEQCDY----------------------PPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred ch---HHHHhhh-----hhcCCC----------------------CCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 11 1111110 000000 00012235667999999999999999999999999
Q ss_pred HHHHH
Q 042634 413 QLLSF 417 (427)
Q Consensus 413 ~L~~~ 417 (427)
.++++
T Consensus 261 ~~~~~ 265 (267)
T cd08229 261 VAKRM 265 (267)
T ss_pred HHhhh
Confidence 99876
No 99
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.2e-33 Score=269.02 Aligned_cols=187 Identities=24% Similarity=0.284 Sum_probs=149.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+. .....++||||+++|+|..++.. ..+++..+..++.|++.||+||| +.||+||
T Consensus 59 l~hp~i~~~~~~~~-----~~~~~~lv~E~~~~~~L~~~~~~-----~~l~~~~~~~~~~qi~~al~~lH---~~~ivHr 125 (324)
T cd05589 59 ERHPFLVNLFACFQ-----TEDHVCFVMEYAAGGDLMMHIHT-----DVFSEPRAVFYAACVVLGLQYLH---ENKIVYR 125 (324)
T ss_pred cCCCChhceeeEEE-----cCCEEEEEEcCCCCCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEec
Confidence 57999999998753 35678999999999999888754 34899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||+++.... ...|+..|+|||++.+..++.++|||||||++|||++|+.||.+..
T Consensus 126 dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~ 205 (324)
T cd05589 126 DLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDD 205 (324)
T ss_pred CCCHHHeEECCCCcEEeCcccCCccCCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999999999875322 1257889999999999999999999999999999999999997531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC-----CH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM-----NM 407 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp-----t~ 407 (427)
. .+......... . ..+...+..+.+++.+||+.||.+|| ++
T Consensus 206 ~-----~~~~~~i~~~~--------~---------------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~ 251 (324)
T cd05589 206 E-----EEVFDSIVNDE--------V---------------------RYPRFLSREAISIMRRLLRRNPERRLGSGEKDA 251 (324)
T ss_pred H-----HHHHHHHHhCC--------C---------------------CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCH
Confidence 1 11111100000 0 01122355678999999999999999 46
Q ss_pred HHHHH
Q 042634 408 EEVAA 412 (427)
Q Consensus 408 ~ev~~ 412 (427)
.++++
T Consensus 252 ~~l~~ 256 (324)
T cd05589 252 EDVKK 256 (324)
T ss_pred HHHhh
Confidence 66654
No 100
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.7e-33 Score=273.82 Aligned_cols=219 Identities=20% Similarity=0.219 Sum_probs=152.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||||++++.+.. +...++|+|++ .++|.+++... ..+++..++.++.|++.||+||| +.||+||
T Consensus 140 l~HpnIv~~~~~~~~-----~~~~~lv~e~~-~~~L~~~l~~~----~~l~~~~~~~i~~qi~~aL~ylH---~~~IvHr 206 (391)
T PHA03212 140 INHPSIIQLKGTFTY-----NKFTCLILPRY-KTDLYCYLAAK----RNIAICDILAIERSVLRAIQYLH---ENRIIHR 206 (391)
T ss_pred CCCCCCCCEeEEEEE-----CCeeEEEEecC-CCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCcccC
Confidence 579999999988543 56789999999 57888887654 34889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC-------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE-------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~-------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||+|||++.++.+||+|||+|+.... ...||+.|+|||++.+..++.++|||||||++|||++|..||...
T Consensus 207 DiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~ 286 (391)
T PHA03212 207 DIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEK 286 (391)
T ss_pred CCChHhEEEcCCCCEEEEeCCcccccccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCc
Confidence 9999999999999999999999975322 126899999999999999999999999999999999999887542
Q ss_pred cCCC------ccHHHHHHHhcccchhcccCcc--ccccccccchhhhccccccccc--cchHHHHHHHHHHHhhcCCCCC
Q 042634 332 FTGN------LTLHNFVKEALPERLAEIVDPV--LLVEREEGETSKANAHKQFTRS--FSVKECLVSVLGIGVTCSSELP 401 (427)
Q Consensus 332 ~~~~------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~cl~~dP 401 (427)
.... ..+...+..........-.+.. ..... .. ........+..+. ......+.++.+++.+||+.||
T Consensus 287 ~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP 364 (391)
T PHA03212 287 DGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIY-IG-LAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDA 364 (391)
T ss_pred ccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHH-HH-HHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCCh
Confidence 2111 1111111111100000000000 00000 00 0000000000000 0112346678999999999999
Q ss_pred CCCCCHHHHHH
Q 042634 402 RERMNMEEVAA 412 (427)
Q Consensus 402 ~~Rpt~~ev~~ 412 (427)
++|||++|+++
T Consensus 365 ~~Rpta~elL~ 375 (391)
T PHA03212 365 HHRPSAEALLD 375 (391)
T ss_pred hhCCCHHHHhc
Confidence 99999999986
No 101
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=3e-33 Score=259.43 Aligned_cols=203 Identities=23% Similarity=0.385 Sum_probs=157.4
Q ss_pred cccccchhhhccccccCC-CCCCccceeeeeecCCCcccccccchh--hhhccCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 042634 179 IRHRNLVKIITSCASVDF-QGNDSEALVYEFMVNGSLEEWLHPNRE--ALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~--~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~i 255 (427)
++|||++++++.+..... ......+++|||+++|+|.+++..... ....+++..+..++.|++.||+||| +.++
T Consensus 58 l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH---~~~i 134 (273)
T cd05035 58 FDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLS---NRNF 134 (273)
T ss_pred CCCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 569999999987654222 223457899999999999988754321 1235889999999999999999999 8999
Q ss_pred eeccccCCceeeCCCCceEecccccccccCCcC--------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCC
Q 042634 256 VHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT--------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKR 326 (427)
Q Consensus 256 vHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~--------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~ 326 (427)
+||||||+||++++++.+||+|||.++...... ..+..|+|||++.+..++.++|||||||++|||++ |..
T Consensus 135 ~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~ 214 (273)
T cd05035 135 IHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQT 214 (273)
T ss_pred eccccchheEEECCCCeEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999998654321 34567999999988889999999999999999999 889
Q ss_pred CCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC
Q 042634 327 PTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN 406 (427)
Q Consensus 327 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt 406 (427)
||.+... ....+....... ...+..++.++.+++.+||+.||++|||
T Consensus 215 p~~~~~~--~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~ 261 (273)
T cd05035 215 PYPGVEN--HEIYDYLRHGNR-------------------------------LKQPEDCLDELYDLMYSCWRADPKDRPT 261 (273)
T ss_pred CCCCCCH--HHHHHHHHcCCC-------------------------------CCCCcCCCHHHHHHHHHHcCCChhhCcC
Confidence 9865321 111111110000 0012234567899999999999999999
Q ss_pred HHHHHHHHHHH
Q 042634 407 MEEVAAQLLSF 417 (427)
Q Consensus 407 ~~ev~~~L~~~ 417 (427)
+.|+++.|+++
T Consensus 262 ~~e~~~~l~~~ 272 (273)
T cd05035 262 FTKLREVLENI 272 (273)
T ss_pred HHHHHHHHHhh
Confidence 99999999875
No 102
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.7e-33 Score=258.77 Aligned_cols=197 Identities=28% Similarity=0.390 Sum_probs=155.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|+|++++++.+. ..+...+++|||+++++|.+++..... ..+++..+..++.|++.||+||| ++|++||
T Consensus 56 l~~~~i~~~~~~~~----~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~ 126 (256)
T cd05082 56 LRHSNLVQLLGVIV----EEKGGLYIVTEYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLE---ANNFVHR 126 (256)
T ss_pred CCCCCeeeEEEEEE----cCCCceEEEEECCCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCEecc
Confidence 57999999988642 224567999999999999999865432 34788999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC---CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCcccCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT---NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNEMFTG 334 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~---~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~~~~~ 334 (427)
||||+||+++.++.+||+|||.++...... ..+..|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 127 dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~--- 203 (256)
T cd05082 127 DLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI--- 203 (256)
T ss_pred ccchheEEEcCCCcEEecCCccceeccccCCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC---
Confidence 999999999999999999999998654322 44567999999988889999999999999999997 99998642
Q ss_pred CccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 042634 335 NLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQL 414 (427)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~L 414 (427)
...+........ .. ...+..++..+.+++.+||+.+|++|||++++++.|
T Consensus 204 --~~~~~~~~~~~~-----~~-----------------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l 253 (256)
T cd05082 204 --PLKDVVPRVEKG-----YK-----------------------MDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQL 253 (256)
T ss_pred --CHHHHHHHHhcC-----CC-----------------------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHH
Confidence 111111110000 00 001223466789999999999999999999999998
Q ss_pred HHH
Q 042634 415 LSF 417 (427)
Q Consensus 415 ~~~ 417 (427)
+++
T Consensus 254 ~~~ 256 (256)
T cd05082 254 EHI 256 (256)
T ss_pred hcC
Confidence 764
No 103
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=5.9e-34 Score=270.73 Aligned_cols=189 Identities=20% Similarity=0.260 Sum_probs=151.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+||||+++++.+.. +...++||||+++|+|..++... ..+++..+..++.|++.||+||| +.||+||
T Consensus 53 ~~hp~i~~~~~~~~~-----~~~~~lv~E~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHr 120 (321)
T cd05591 53 AKHPFLTALHCCFQT-----KDRLFFVMEYVNGGDLMFQIQRS----RKFDEPRSRFYAAEVTLALMFLH---RHGVIYR 120 (321)
T ss_pred cCCCCccceeeEEEc-----CCeEEEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecc
Confidence 479999999988543 56789999999999999888654 35889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||+++..... ..|+..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 121 Dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~ 200 (321)
T cd05591 121 DLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADN 200 (321)
T ss_pred CCCHHHeEECCCCCEEEeecccceecccCCccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCC
Confidence 99999999999999999999998754221 257889999999999999999999999999999999999997532
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC-------
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM------- 405 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp------- 405 (427)
. ........... .. .+...+.++.+++.+||+.||++||
T Consensus 201 ~-----~~~~~~i~~~~---~~--------------------------~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~ 246 (321)
T cd05591 201 E-----DDLFESILHDD---VL--------------------------YPVWLSKEAVSILKAFMTKNPNKRLGCVASQG 246 (321)
T ss_pred H-----HHHHHHHHcCC---CC--------------------------CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCC
Confidence 1 11111111000 00 1111345688999999999999999
Q ss_pred CHHHHHHH
Q 042634 406 NMEEVAAQ 413 (427)
Q Consensus 406 t~~ev~~~ 413 (427)
++++++++
T Consensus 247 ~~~~~~~h 254 (321)
T cd05591 247 GEDAIKQH 254 (321)
T ss_pred CHHHHhcC
Confidence 77777754
No 104
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=6.6e-34 Score=271.83 Aligned_cols=197 Identities=20% Similarity=0.224 Sum_probs=154.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++|+|.+++... ..+++..++.++.|++.||.||| +.||+||
T Consensus 58 ~~h~~iv~~~~~~~~-----~~~~~lv~e~~~g~~L~~~l~~~----~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~ 125 (333)
T cd05600 58 TKSEWLVKLLYAFQD-----DEYLYLAMEYVPGGDFRTLLNNL----GVLSEDHARFYMAEMFEAVDALH---ELGYIHR 125 (333)
T ss_pred CCCCCCccEEEEEEc-----CCEEEEEEeCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccc
Confidence 459999999987543 56789999999999999998654 35889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC---cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE---ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGN 335 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~~ 335 (427)
||||+||+++.++.+||+|||+++.... ...|+..|+|||++.+..++.++|||||||++|||++|..||......
T Consensus 126 dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~- 204 (333)
T cd05600 126 DLKPENFLIDASGHIKLTDFGLSKGIVTYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPN- 204 (333)
T ss_pred CCCHHHEEECCCCCEEEEeCcCCcccccccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHH-
Confidence 9999999999999999999999986543 337889999999999999999999999999999999999999753111
Q ss_pred ccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 042634 336 LTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQ 413 (427)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~ 413 (427)
.....+.. . ........ .. ......+.++.+++.+||..+|++|||++|++++
T Consensus 205 -~~~~~i~~-~----~~~~~~~~-----------------~~--~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 205 -ETWENLKY-W----KETLQRPV-----------------YD--DPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred -HHHHHHHh-c----cccccCCC-----------------CC--ccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 01010000 0 00000000 00 0001245678899999999999999999999865
No 105
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=2.7e-33 Score=259.76 Aligned_cols=203 Identities=23% Similarity=0.400 Sum_probs=155.5
Q ss_pred cccccchhhhccccccCC-CCCCccceeeeeecCCCcccccccch--hhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 042634 179 IRHRNLVKIITSCASVDF-QGNDSEALVYEFMVNGSLEEWLHPNR--EALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~i 255 (427)
++||||+++++.+..... ......+++|||+++|+|.+++.... .....+++..+..++.|++.||+||| ++||
T Consensus 57 l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i 133 (272)
T cd05075 57 FDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLS---SKSF 133 (272)
T ss_pred CCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHH---HCCe
Confidence 579999999987643211 12235689999999999988774221 11245889999999999999999999 8999
Q ss_pred eeccccCCceeeCCCCceEecccccccccCCcC--------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCC
Q 042634 256 VHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT--------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKR 326 (427)
Q Consensus 256 vHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~--------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~ 326 (427)
+||||||+||+++.++.+||+|||+++...... .++..|+|||+..+..++.++|||||||++||+++ |+.
T Consensus 134 ~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~ 213 (272)
T cd05075 134 IHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQT 213 (272)
T ss_pred eccccchhheEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999999998754321 34567999999998899999999999999999999 888
Q ss_pred CCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC
Q 042634 327 PTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN 406 (427)
Q Consensus 327 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt 406 (427)
||..... ..+...+..... . ..+..++..+.+++.+||+.||++|||
T Consensus 214 p~~~~~~--~~~~~~~~~~~~------~-------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps 260 (272)
T cd05075 214 PYPGVEN--SEIYDYLRQGNR------L-------------------------KQPPDCLDGLYSLMSSCWLLNPKDRPS 260 (272)
T ss_pred CCCCCCH--HHHHHHHHcCCC------C-------------------------CCCCCCCHHHHHHHHHHcCCCcccCcC
Confidence 9865311 111111110000 0 011124556899999999999999999
Q ss_pred HHHHHHHHHHH
Q 042634 407 MEEVAAQLLSF 417 (427)
Q Consensus 407 ~~ev~~~L~~~ 417 (427)
+.|+++.|+++
T Consensus 261 ~~~l~~~l~~~ 271 (272)
T cd05075 261 FETLRCELEKA 271 (272)
T ss_pred HHHHHHHHHhh
Confidence 99999999874
No 106
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=2e-33 Score=259.13 Aligned_cols=198 Identities=24% Similarity=0.410 Sum_probs=153.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. .+...+++|||+.+|+|.+++.... ...++..+..++.|++.||+||| ..+++||
T Consensus 53 l~h~~iv~~~~~~~~----~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~ 122 (262)
T cd05058 53 FSHPNVLSLLGICLP----SEGSPLVVLPYMKHGDLRNFIRSET---HNPTVKDLIGFGLQVAKGMEYLA---SKKFVHR 122 (262)
T ss_pred CCCCCcceEEEEeec----CCCCcEEEEecCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---hCCcccc
Confidence 579999999986533 2345789999999999999986543 33677788999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC----------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhC-CCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE----------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTG-KRP 327 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~----------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g-~~p 327 (427)
||||+||+++.++.+||+|||+++.... ...++..|+|||++.+..++.++|||||||++|||++| .+|
T Consensus 123 dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~ 202 (262)
T cd05058 123 DLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 202 (262)
T ss_pred ccCcceEEEcCCCcEEECCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCC
Confidence 9999999999999999999999975432 11345679999999888999999999999999999995 556
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
|.... ............ +...+..++..+.+++.+||+.+|++|||+
T Consensus 203 ~~~~~-----~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~ 249 (262)
T cd05058 203 YPDVD-----SFDITVYLLQGR----------------------------RLLQPEYCPDPLYEVMLSCWHPKPEMRPTF 249 (262)
T ss_pred CCCCC-----HHHHHHHHhcCC----------------------------CCCCCCcCCHHHHHHHHHHcCCChhhCCCH
Confidence 65321 111111100000 000112234568999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 042634 408 EEVAAQLLSFRN 419 (427)
Q Consensus 408 ~ev~~~L~~~~~ 419 (427)
.|+++.|+++..
T Consensus 250 ~~il~~l~~~~~ 261 (262)
T cd05058 250 SELVSRIEQIFS 261 (262)
T ss_pred HHHHHHHHHHhc
Confidence 999999998753
No 107
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=8.5e-34 Score=269.82 Aligned_cols=189 Identities=22% Similarity=0.271 Sum_probs=150.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. +...++||||+++|+|.+++... ..+++..+..++.|++.||+||| +.||+||
T Consensus 57 l~hp~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~ 124 (323)
T cd05584 57 VKHPFIVDLIYAFQT-----GGKLYLILEYLSGGELFMHLERE----GIFMEDTACFYLSEISLALEHLH---QQGIIYR 124 (323)
T ss_pred CCCCchhceeeEEec-----CCeEEEEEeCCCCchHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecC
Confidence 579999999987533 56789999999999999988654 34788899999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+|||++.++.+||+|||+++.... ...|+..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 125 dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~ 204 (323)
T cd05584 125 DLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAEN 204 (323)
T ss_pred CCCHHHeEECCCCCEEEeeCcCCeecccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCC
Confidence 9999999999999999999999874322 1268889999999998889999999999999999999999997531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC-----CH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM-----NM 407 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp-----t~ 407 (427)
. ........... .. .+...+.++.+++.+||+.||++|| ++
T Consensus 205 ~-----~~~~~~~~~~~--------~~---------------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 250 (323)
T cd05584 205 R-----KKTIDKILKGK--------LN---------------------LPPYLTPEARDLLKKLLKRNPSSRLGAGPGDA 250 (323)
T ss_pred H-----HHHHHHHHcCC--------CC---------------------CCCCCCHHHHHHHHHHcccCHhHcCCCCCCCH
Confidence 1 11111111100 00 1112345688999999999999999 78
Q ss_pred HHHHHH
Q 042634 408 EEVAAQ 413 (427)
Q Consensus 408 ~ev~~~ 413 (427)
++++++
T Consensus 251 ~~l~~h 256 (323)
T cd05584 251 AEVQSH 256 (323)
T ss_pred HHHhcC
Confidence 887663
No 108
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=2.4e-33 Score=261.23 Aligned_cols=196 Identities=31% Similarity=0.519 Sum_probs=155.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccch----------hhhhccCHHHHHHHHHHHHHHHHHHh
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNR----------EALKNLNLLQRLSIAVDVASALDYLH 248 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----------~~~~~l~~~~~~~~~~~i~~~L~~LH 248 (427)
++|||++++++.+.. ....++||||+++++|.+++.... .....+++..+..++.|++.|++|||
T Consensus 65 l~~~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH 139 (280)
T cd05049 65 FQHENIVKFYGVCTE-----GDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLA 139 (280)
T ss_pred cCCCCchheeeEEec-----CCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHh
Confidence 469999999998544 467899999999999999986432 11245788999999999999999999
Q ss_pred hcCCCCeeeccccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCCCCcCccccchhHHHHHHH
Q 042634 249 HYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLE 320 (427)
Q Consensus 249 ~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~e 320 (427)
..|++||||||+||+++.++.+||+|||.++..... ..++..|+|||++.+..++.++|||||||++||
T Consensus 140 ---~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e 216 (280)
T cd05049 140 ---SQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWE 216 (280)
T ss_pred ---hCCeeccccccceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHH
Confidence 899999999999999999999999999999754221 134568999999999999999999999999999
Q ss_pred HHh-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCC
Q 042634 321 TFT-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSE 399 (427)
Q Consensus 321 ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~ 399 (427)
|++ |..||...... ........ ... ...+..++.++.+++++||+.
T Consensus 217 ~~~~g~~p~~~~~~~--~~~~~~~~---~~~----------------------------~~~~~~~~~~~~~li~~~l~~ 263 (280)
T cd05049 217 IFTYGKQPWYGLSNE--EVIECITQ---GRL----------------------------LQRPRTCPSEVYDIMLGCWKR 263 (280)
T ss_pred HHhcCCCCCCCCCHH--HHHHHHHc---CCc----------------------------CCCCCCCCHHHHHHHHHHcCC
Confidence 998 99998653211 11111110 000 001123456789999999999
Q ss_pred CCCCCCCHHHHHHHHH
Q 042634 400 LPRERMNMEEVAAQLL 415 (427)
Q Consensus 400 dP~~Rpt~~ev~~~L~ 415 (427)
||++|||+.||++.|+
T Consensus 264 ~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 264 DPQQRINIKDIHERLQ 279 (280)
T ss_pred CcccCCCHHHHHHHhh
Confidence 9999999999999886
No 109
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.4e-33 Score=262.41 Aligned_cols=196 Identities=19% Similarity=0.275 Sum_probs=152.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++.+.+. .+...++||||+++++|.+++..... ..+++..+..++.|++.||+||| +.||+||
T Consensus 50 l~hp~i~~~~~~~~-----~~~~~~lv~e~~~g~~L~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~ 119 (277)
T cd05607 50 VNSPFIVNLAYAFE-----SKTHLCLVMSLMNGGDLKYHIYNVGE--RGLEMERVIHYSAQITCGILHLH---SMDIVYR 119 (277)
T ss_pred cCCCcEEEEEEEEe-----cCCeEEEEEecCCCCCHHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHH---HCCEEEc
Confidence 57999999888743 35678999999999999888754332 35888999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
||||+||+++.++.+||+|||++...... ..++..|+|||++.+..++.++||||+||++|||++|+.||.....
T Consensus 120 dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~ 199 (277)
T cd05607 120 DMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKE 199 (277)
T ss_pred cCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcc
Confidence 99999999999999999999999865432 2678899999999998899999999999999999999999975321
Q ss_pred CCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 042634 334 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQ 413 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~ 413 (427)
.. .............. . ......+.++.+++.+||+.||++|||++|+++.
T Consensus 200 ~~-~~~~~~~~~~~~~~----~------------------------~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ 250 (277)
T cd05607 200 KV-AKEELKRRTLEDEV----K------------------------FEHQNFTEESKDICRLFLAKKPEDRLGSREKNDD 250 (277)
T ss_pred hh-hHHHHHHHhhcccc----c------------------------cccccCCHHHHHHHHHHhccCHhhCCCCccchhh
Confidence 11 11111111110000 0 0011235568999999999999999999776643
No 110
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.8e-33 Score=258.66 Aligned_cols=193 Identities=25% Similarity=0.430 Sum_probs=152.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. +...+++|||+.+|+|.+++.... ..+++..++.++.|++.||+||| +.|++|+
T Consensus 56 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~l~~~i~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~ 124 (256)
T cd05113 56 LSHEKLVQLYGVCTK-----QRPIYIVTEYMSNGCLLNYLREHG---KRFQPSQLLEMCKDVCEGMAYLE---SKQFIHR 124 (256)
T ss_pred CCCCCeeeEEEEEcc-----CCCcEEEEEcCCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeecc
Confidence 579999999998644 456799999999999999986543 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC-------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT-------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~-------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~ 330 (427)
||||+||+++.++.+||+|||.++...... .++..|+|||...+..++.++|||||||++|||++ |..||..
T Consensus 125 dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~ 204 (256)
T cd05113 125 DLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYER 204 (256)
T ss_pred ccCcceEEEcCCCCEEECCCccceecCCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCc
Confidence 999999999999999999999988653322 34567999999988889999999999999999998 9999864
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
.... ............ ..+...+..+.+++.+||+.+|++|||+.++
T Consensus 205 ~~~~--~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l 251 (256)
T cd05113 205 FNNS--ETVEKVSQGLRL-------------------------------YRPHLASEKVYAIMYSCWHEKAEERPTFQQL 251 (256)
T ss_pred CCHH--HHHHHHhcCCCC-------------------------------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHH
Confidence 3211 011110000000 0111134678999999999999999999999
Q ss_pred HHHHH
Q 042634 411 AAQLL 415 (427)
Q Consensus 411 ~~~L~ 415 (427)
++.|+
T Consensus 252 l~~~~ 256 (256)
T cd05113 252 LSSIE 256 (256)
T ss_pred HHhhC
Confidence 98764
No 111
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=2.3e-33 Score=260.00 Aligned_cols=198 Identities=25% Similarity=0.366 Sum_probs=154.6
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh------------hhhccCHHHHHHHHHHHHHHHHHH
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE------------ALKNLNLLQRLSIAVDVASALDYL 247 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~~~~~i~~~L~~L 247 (427)
+||||+++++.+.. ....++||||+++|+|.+++..... ....+++.+++.++.|++.|++||
T Consensus 54 ~h~~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~l 128 (270)
T cd05047 54 HHPNIINLLGACEH-----RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL 128 (270)
T ss_pred cCCCeeeEEEEEec-----CCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 79999999998644 4567999999999999999865321 113478999999999999999999
Q ss_pred hhcCCCCeeeccccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHHH
Q 042634 248 HHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETF 322 (427)
Q Consensus 248 H~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell 322 (427)
| +.|++||||||+||++++++.+||+|||+++..... ...+..|+|||++....++.++|||||||++|||+
T Consensus 129 H---~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~ 205 (270)
T cd05047 129 S---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 205 (270)
T ss_pred H---HCCEeecccccceEEEcCCCeEEECCCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHH
Confidence 9 899999999999999999999999999998643211 12345699999998888999999999999999999
Q ss_pred h-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCC
Q 042634 323 T-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELP 401 (427)
Q Consensus 323 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP 401 (427)
+ |..||.+... .......... . .. ..+..++.++.+++.+||+.+|
T Consensus 206 ~~g~~pf~~~~~-----~~~~~~~~~~-~--~~-------------------------~~~~~~~~~~~~li~~~l~~~p 252 (270)
T cd05047 206 SLGGTPYCGMTC-----AELYEKLPQG-Y--RL-------------------------EKPLNCDDEVYDLMRQCWREKP 252 (270)
T ss_pred cCCCCCccccCH-----HHHHHHHhCC-C--CC-------------------------CCCCcCCHHHHHHHHHHcccCh
Confidence 7 9999865311 1111111000 0 00 0111244568899999999999
Q ss_pred CCCCCHHHHHHHHHHHH
Q 042634 402 RERMNMEEVAAQLLSFR 418 (427)
Q Consensus 402 ~~Rpt~~ev~~~L~~~~ 418 (427)
.+|||+.|+++.|+++.
T Consensus 253 ~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 253 YERPSFAQILVSLNRML 269 (270)
T ss_pred hhCCCHHHHHHHHHHhh
Confidence 99999999999998864
No 112
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=2.4e-33 Score=262.74 Aligned_cols=200 Identities=25% Similarity=0.416 Sum_probs=157.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh--------------------hhhccCHHHHHHHHH
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE--------------------ALKNLNLLQRLSIAV 238 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--------------------~~~~l~~~~~~~~~~ 238 (427)
++||||+++++.+.. ....++++||+.+|+|.+++..... ....+++..++.++.
T Consensus 60 l~h~~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~ 134 (290)
T cd05045 60 VNHPHVIKLYGACSQ-----DGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAW 134 (290)
T ss_pred CCCCCEeeEEEEEec-----CCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHH
Confidence 469999999987543 4568999999999999988753211 113578899999999
Q ss_pred HHHHHHHHHhhcCCCCeeeccccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCCCCcCcccc
Q 042634 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGD 310 (427)
Q Consensus 239 ~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~D 310 (427)
|++.||+||| +.|++||||||+||++++++.+||+|||.++..... ..++..|+|||...+..++.++|
T Consensus 135 ~i~~~l~~LH---~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~D 211 (290)
T cd05045 135 QISRGMQYLA---EMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSD 211 (290)
T ss_pred HHHHHHHHHH---HCCeehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhH
Confidence 9999999999 899999999999999999999999999999764321 13456899999998888999999
Q ss_pred chhHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHH
Q 042634 311 VYSFGILLLETFT-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSV 389 (427)
Q Consensus 311 iwS~G~vl~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (427)
||||||++|||++ |..||.+... ..+.+....... ...+..++.++
T Consensus 212 i~slG~~l~el~t~g~~p~~~~~~--~~~~~~~~~~~~-------------------------------~~~~~~~~~~~ 258 (290)
T cd05045 212 VWSFGVLLWEIVTLGGNPYPGIAP--ERLFNLLKTGYR-------------------------------MERPENCSEEM 258 (290)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHhCCCC-------------------------------CCCCCCCCHHH
Confidence 9999999999998 9999865311 111111110000 00122345678
Q ss_pred HHHHhhcCCCCCCCCCCHHHHHHHHHHHHH
Q 042634 390 LGIGVTCSSELPRERMNMEEVAAQLLSFRN 419 (427)
Q Consensus 390 ~~l~~~cl~~dP~~Rpt~~ev~~~L~~~~~ 419 (427)
.+++.+||+.+|++|||++|+++.|+++..
T Consensus 259 ~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 259 YNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred HHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 899999999999999999999999998864
No 113
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=2.1e-33 Score=262.73 Aligned_cols=221 Identities=21% Similarity=0.222 Sum_probs=155.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+||||+++++.+...........+++|||+. ++|.+++..... ..+++..++.++.|++.||+||| +.||+||
T Consensus 59 ~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~ 132 (288)
T cd07863 59 FDHPNIVRLMDVCATSRTDRETKVTLVFEHVD-QDLRTYLDKVPP--PGLPAETIKDLMRQFLRGLDFLH---ANCIVHR 132 (288)
T ss_pred cCCCCeeeeeeeeccccCCCCceEEEEEcccc-cCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeecC
Confidence 46999999999865533334456799999996 588888765432 34899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
||||+||+++.++.+||+|||+++..... ..++..|+|||++.+..++.++||||+||++|||++|++||.....
T Consensus 133 dikp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~ 212 (288)
T cd07863 133 DLKPENILVTSGGQVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE 212 (288)
T ss_pred CCCHHHEEECCCCCEEECccCccccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCH
Confidence 99999999999999999999999876432 2567889999999988999999999999999999999999865321
Q ss_pred CCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 334 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
...+.+............ ......... ... ........ ....+..+.++.+++.+|++.||++|||+.|++.
T Consensus 213 -~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~--~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 213 -ADQLGKIFDLIGLPPEDD-WPRDVTLPR--GAF--SPRGPRPV-QSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred -HHHHHHHHHHhCCCChhh-Ccccccccc--ccc--CCCCCCch-HHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 111111111110000000 000000000 000 00000000 0011234567889999999999999999999985
No 114
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=2.5e-33 Score=258.29 Aligned_cols=196 Identities=27% Similarity=0.478 Sum_probs=157.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. ....++||||+++++|.+++..... ..+++..+..++.|++.|++||| +.||+||
T Consensus 59 l~~~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~al~~lH---~~~i~h~ 128 (261)
T cd05148 59 LRHKHLISLFAVCSV-----GEPVYIITELMEKGSLLAFLRSPEG--QVLPVASLIDMACQVAEGMAYLE---EQNSIHR 128 (261)
T ss_pred CCCcchhheeeeEec-----CCCeEEEEeecccCCHHHHHhcCCC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecc
Confidence 469999999887543 5578999999999999999976432 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~~ 331 (427)
||||+||+++.++.+||+|||.+....... .++..|+|||......++.++||||||+++|++++ |+.||...
T Consensus 129 dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~ 208 (261)
T cd05148 129 DLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGM 208 (261)
T ss_pred ccCcceEEEcCCceEEEccccchhhcCCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcC
Confidence 999999999999999999999997654322 34567999999988889999999999999999998 89999653
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
.. ............. ..+..++..+.+++.+||+.||++|||++|++
T Consensus 209 ~~--~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~ 255 (261)
T cd05148 209 NN--HEVYDQITAGYRM-------------------------------PCPAKCPQEIYKIMLECWAAEPEDRPSFKALR 255 (261)
T ss_pred CH--HHHHHHHHhCCcC-------------------------------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHH
Confidence 21 0111111100000 01223456789999999999999999999999
Q ss_pred HHHHHH
Q 042634 412 AQLLSF 417 (427)
Q Consensus 412 ~~L~~~ 417 (427)
+.|+.+
T Consensus 256 ~~L~~~ 261 (261)
T cd05148 256 EELDNI 261 (261)
T ss_pred HHHhcC
Confidence 999864
No 115
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=2.9e-33 Score=260.64 Aligned_cols=197 Identities=21% Similarity=0.364 Sum_probs=156.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ...++++||+++|+|.+++.... ..+++..++.++.|++.||+||| +.||+||
T Consensus 66 ~~~~~i~~~~~~~~~------~~~~l~~~~~~~g~l~~~l~~~~---~~~~~~~~~~~~~qi~~~L~~lH---~~~iiH~ 133 (279)
T cd05109 66 VGSPYVCRLLGICLT------STVQLVTQLMPYGCLLDYVRENK---DRIGSQDLLNWCVQIAKGMSYLE---EVRLVHR 133 (279)
T ss_pred cCCCCCceEEEEEcC------CCcEEEEEcCCCCCHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecc
Confidence 579999999987643 34679999999999999987543 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC--------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT--------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~--------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~ 329 (427)
||||+||+++.++.+||+|||+++...... .++..|+|||...+..++.++|||||||++||+++ |..||.
T Consensus 134 dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~ 213 (279)
T cd05109 134 DLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYD 213 (279)
T ss_pred ccccceEEEcCCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Confidence 999999999999999999999998664221 33567999999988899999999999999999998 899986
Q ss_pred cccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 330 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
.... ..+...+...... ..+..++.++.+++.+||+.||++|||+.|
T Consensus 214 ~~~~--~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~ 260 (279)
T cd05109 214 GIPA--REIPDLLEKGERL-------------------------------PQPPICTIDVYMIMVKCWMIDSECRPRFRE 260 (279)
T ss_pred CCCH--HHHHHHHHCCCcC-------------------------------CCCccCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 5311 1111111110000 011224567889999999999999999999
Q ss_pred HHHHHHHHHHH
Q 042634 410 VAAQLLSFRNK 420 (427)
Q Consensus 410 v~~~L~~~~~~ 420 (427)
+++.|+++..+
T Consensus 261 l~~~l~~~~~~ 271 (279)
T cd05109 261 LVDEFSRMARD 271 (279)
T ss_pred HHHHHHHhhcC
Confidence 99999888654
No 116
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=3e-33 Score=260.60 Aligned_cols=202 Identities=25% Similarity=0.441 Sum_probs=160.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhh----hhccCHHHHHHHHHHHHHHHHHHhhcCCCC
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREA----LKNLNLLQRLSIAVDVASALDYLHHYCETP 254 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~----~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ 254 (427)
++|||++++++.+.. .+...++++||+++|+|.+++...... ...+++..+..++.|++.||+||| +.+
T Consensus 65 l~h~ni~~~~~~~~~----~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~ 137 (280)
T cd05043 65 LSHQNILPILHVCIE----DGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH---KRG 137 (280)
T ss_pred CCCCCCCeEEEEEec----CCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCC
Confidence 479999999987533 245678999999999999998654221 145889999999999999999999 899
Q ss_pred eeeccccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCCCCcCccccchhHHHHHHHHHh-CC
Q 042634 255 IVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GK 325 (427)
Q Consensus 255 ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~ 325 (427)
++||||||+||++++++.+||+|||+++.+... ..++..|+|||++.+..++.++|||||||++||+++ |+
T Consensus 138 i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~ 217 (280)
T cd05043 138 VIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQ 217 (280)
T ss_pred EeecccCHhhEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCC
Confidence 999999999999999999999999999865322 245667999999988889999999999999999999 99
Q ss_pred CCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC
Q 042634 326 RPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM 405 (427)
Q Consensus 326 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp 405 (427)
.||.... ...+.......... ..+..++.++.+++.+||+.||++||
T Consensus 218 ~p~~~~~--~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp 264 (280)
T cd05043 218 TPYVEID--PFEMAAYLKDGYRL-------------------------------AQPINCPDELFAVMACCWALDPEERP 264 (280)
T ss_pred CCcCcCC--HHHHHHHHHcCCCC-------------------------------CCCCcCCHHHHHHHHHHcCCChhhCC
Confidence 9996531 11111111110000 01122456789999999999999999
Q ss_pred CHHHHHHHHHHHHHH
Q 042634 406 NMEEVAAQLLSFRNK 420 (427)
Q Consensus 406 t~~ev~~~L~~~~~~ 420 (427)
|+.|+++.|+++.++
T Consensus 265 s~~~~~~~l~~~~~~ 279 (280)
T cd05043 265 SFSQLVQCLTDFHAQ 279 (280)
T ss_pred CHHHHHHHHHHHHhc
Confidence 999999999998765
No 117
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=3.5e-33 Score=257.65 Aligned_cols=190 Identities=21% Similarity=0.327 Sum_probs=147.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++++.. +...+++|||+++|+|..++.... ..+++..++.++.||+.||+||| +.||+||
T Consensus 61 l~hp~iv~~~~~~~~-----~~~~~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~ 129 (262)
T cd05077 61 VSHKHIVLLYGVCVR-----DVENIMVEEFVEFGPLDLFMHRKS---DVLTTPWKFKVAKQLASALSYLE---DKDLVHG 129 (262)
T ss_pred CCCCCEeeEEEEEec-----CCCCEEEEecccCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHhh---hCCeECC
Confidence 579999999998643 456789999999999988876432 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCc-------eEecccccccccCCc--CCCccccccccccC-CCCcCccccchhHHHHHHHHH-hCCCC
Q 042634 259 DLKPSNVLLDGELT-------AHVGDFGLAKFLPEA--TNNFFNFQIAEYGM-GSEVSTSGDVYSFGILLLETF-TGKRP 327 (427)
Q Consensus 259 Dlkp~NIll~~~~~-------~kL~DFG~a~~~~~~--~~~~~~y~aPE~~~-~~~~~~~~DiwS~G~vl~ell-~g~~p 327 (427)
||||+|||++.++. +|++|||.+...... ..++..|+|||.+. +..++.++|||||||++|||+ .|..|
T Consensus 130 dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p 209 (262)
T cd05077 130 NVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIP 209 (262)
T ss_pred CCCcccEEEecCCccCCCCceeEeCCCCCCccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCC
Confidence 99999999976653 899999999765432 36778899999886 466899999999999999998 58888
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
|...... ....... ... . .....+.++.+++.+||+.||++|||+
T Consensus 210 ~~~~~~~--~~~~~~~----~~~-~----------------------------~~~~~~~~~~~li~~cl~~dp~~Rp~~ 254 (262)
T cd05077 210 LKDKTLA--EKERFYE----GQC-M----------------------------LVTPSCKELADLMTHCMNYDPNQRPFF 254 (262)
T ss_pred CCCcchh--HHHHHHh----cCc-c----------------------------CCCCChHHHHHHHHHHcCCChhhCcCH
Confidence 7642110 0000000 000 0 000123568899999999999999999
Q ss_pred HHHHHHH
Q 042634 408 EEVAAQL 414 (427)
Q Consensus 408 ~ev~~~L 414 (427)
.||++.+
T Consensus 255 ~~il~~~ 261 (262)
T cd05077 255 RAIMRDI 261 (262)
T ss_pred HHHHHhc
Confidence 9999876
No 118
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=9.4e-34 Score=273.08 Aligned_cols=139 Identities=30% Similarity=0.421 Sum_probs=124.2
Q ss_pred ccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecccc
Q 042634 182 RNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLK 261 (427)
Q Consensus 182 pniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlk 261 (427)
-|+|++++++ ...++.|||+|.+ ..+|+++++.+.. ..++...++.++.||+.||.+|| +.||||+|||
T Consensus 248 ~n~Vrm~d~F-----~fr~HlciVfELL-~~NLYellK~n~f--~Glsl~~ir~~~~Qil~~L~~L~---~l~IIHcDLK 316 (586)
T KOG0667|consen 248 YNIVRMLDYF-----YFRNHLCIVFELL-STNLYELLKNNKF--RGLSLPLVRKFAQQILTALLFLH---ELGIIHCDLK 316 (586)
T ss_pred eeEEEeeecc-----ccccceeeeehhh-hhhHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCC
Confidence 4789999984 4478999999988 8899999987765 56999999999999999999999 9999999999
Q ss_pred CCceeeCCC--CceEecccccccccCCcC---CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 262 PSNVLLDGE--LTAHVGDFGLAKFLPEAT---NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 262 p~NIll~~~--~~~kL~DFG~a~~~~~~~---~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
|||||+... ..+||+|||.|....... ..+..|+|||++.+.+|+.+.||||||||++||++|.+.|.+.
T Consensus 317 PENILL~~~~r~~vKVIDFGSSc~~~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ 391 (586)
T KOG0667|consen 317 PENILLKDPKRSRIKVIDFGSSCFESQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD 391 (586)
T ss_pred hhheeeccCCcCceeEEecccccccCCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence 999999543 379999999999877666 4567899999999999999999999999999999999888764
No 119
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=9e-34 Score=269.71 Aligned_cols=184 Identities=24% Similarity=0.245 Sum_probs=148.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++|+|.+++... ..+++..+..++.||+.||+||| +.||+||
T Consensus 53 l~hp~iv~~~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~givH~ 120 (323)
T cd05575 53 VKHPFLVGLHYSFQT-----ADKLYFVLDYVNGGELFFHLQRE----RSFPEPRARFYAAEIASALGYLH---SLNIIYR 120 (323)
T ss_pred CCCCCCCCeeEEEEe-----CCEEEEEEcCCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeC
Confidence 579999999887533 56789999999999999888654 45889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+|||++.++.+||+|||+++.... ...|+..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 121 dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~ 200 (323)
T cd05575 121 DLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRD 200 (323)
T ss_pred CCCHHHeEECCCCcEEEeccCCCcccccCCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCC
Confidence 9999999999999999999999875322 1258889999999999999999999999999999999999997531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
..+.......... . .+...+.++.+++.+|++.||++||++.
T Consensus 201 -----~~~~~~~i~~~~~----~-------------------------~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 201 -----TAEMYDNILNKPL----R-------------------------LKPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred -----HHHHHHHHHcCCC----C-------------------------CCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 1111111110000 0 0111245688999999999999999985
No 120
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=2.9e-33 Score=263.78 Aligned_cols=201 Identities=26% Similarity=0.383 Sum_probs=156.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh------------hhhccCHHHHHHHHHHHHHHHHH
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE------------ALKNLNLLQRLSIAVDVASALDY 246 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~~~~~i~~~L~~ 246 (427)
.+||||+++++.+.. ....++||||+++|+|.+++..... ....+++.+++.++.|++.|++|
T Consensus 65 ~~h~~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~ 139 (303)
T cd05088 65 GHHPNIINLLGACEH-----RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDY 139 (303)
T ss_pred cCCCCcceEEEEECC-----CCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHH
Confidence 379999999998543 5678999999999999998864321 11357899999999999999999
Q ss_pred HhhcCCCCeeeccccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHH
Q 042634 247 LHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLET 321 (427)
Q Consensus 247 LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~el 321 (427)
|| +.||+||||||+||+++.++.+||+|||+++..... ...+..|+|||++.+..++.++|||||||++||+
T Consensus 140 LH---~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el 216 (303)
T cd05088 140 LS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEI 216 (303)
T ss_pred HH---hCCccccccchheEEecCCCcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHH
Confidence 99 899999999999999999999999999998743211 1235579999999888899999999999999999
Q ss_pred Hh-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCC
Q 042634 322 FT-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSEL 400 (427)
Q Consensus 322 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~d 400 (427)
++ |..||...... +.... .+... . ...+..++.++.+++.+||+.+
T Consensus 217 lt~g~~p~~~~~~~-----~~~~~-~~~~~----~-----------------------~~~~~~~~~~~~~li~~~l~~~ 263 (303)
T cd05088 217 VSLGGTPYCGMTCA-----ELYEK-LPQGY----R-----------------------LEKPLNCDDEVYDLMRQCWREK 263 (303)
T ss_pred HhcCCCCcccCChH-----HHHHH-HhcCC----c-----------------------CCCCCCCCHHHHHHHHHHcCCC
Confidence 98 99998643111 11111 00000 0 0011123456889999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHH
Q 042634 401 PRERMNMEEVAAQLLSFRNK 420 (427)
Q Consensus 401 P~~Rpt~~ev~~~L~~~~~~ 420 (427)
|++|||++++++.|+++.+.
T Consensus 264 p~~Rp~~~~il~~l~~~~~~ 283 (303)
T cd05088 264 PYERPSFAQILVSLNRMLEE 283 (303)
T ss_pred hhhCcCHHHHHHHHHHHHHh
Confidence 99999999999999988654
No 121
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=4.4e-33 Score=268.22 Aligned_cols=189 Identities=22% Similarity=0.301 Sum_probs=145.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|+||+++++.+. .+...++||||+++|+|.+.. ..++..+..++.||+.||+||| +.||+||
T Consensus 129 l~h~~iv~~~~~~~-----~~~~~~lv~e~~~~~~L~~~~--------~~~~~~~~~i~~qi~~aL~~LH---~~~ivHr 192 (353)
T PLN00034 129 VNHPNVVKCHDMFD-----HNGEIQVLLEFMDGGSLEGTH--------IADEQFLADVARQILSGIAYLH---RRHIVHR 192 (353)
T ss_pred CCCCCcceeeeEec-----cCCeEEEEEecCCCCcccccc--------cCCHHHHHHHHHHHHHHHHHHH---HCCEeec
Confidence 57999999998753 356789999999999986543 2456678889999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCC-----CCcCccccchhHHHHHHHHHhCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMG-----SEVSTSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~-----~~~~~~~DiwS~G~vl~ell~g~~p 327 (427)
||||+|||++.++.+||+|||+++..... ..|+..|+|||++.. ...+.++|||||||++|||++|+.|
T Consensus 193 Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~p 272 (353)
T PLN00034 193 DIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFP 272 (353)
T ss_pred CCCHHHEEEcCCCCEEEcccccceecccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999865432 368899999998743 2345789999999999999999999
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
|..... ..+........... ....+..++.++.+++.+||+.||++|||+
T Consensus 273 f~~~~~--~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~ 322 (353)
T PLN00034 273 FGVGRQ--GDWASLMCAICMSQ----------------------------PPEAPATASREFRHFISCCLQREPAKRWSA 322 (353)
T ss_pred CCCCCC--ccHHHHHHHHhccC----------------------------CCCCCCccCHHHHHHHHHHccCChhhCcCH
Confidence 973211 11221111110000 000122345678999999999999999999
Q ss_pred HHHHHH
Q 042634 408 EEVAAQ 413 (427)
Q Consensus 408 ~ev~~~ 413 (427)
+|++++
T Consensus 323 ~ell~h 328 (353)
T PLN00034 323 MQLLQH 328 (353)
T ss_pred HHHhcC
Confidence 999875
No 122
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.4e-33 Score=262.76 Aligned_cols=200 Identities=22% Similarity=0.392 Sum_probs=158.0
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh------------hhhccCHHHHHHHHHHHHHHHHHH
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE------------ALKNLNLLQRLSIAVDVASALDYL 247 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~~~~~i~~~L~~L 247 (427)
+||||+++++.+.. ....+++|||+++|+|.+++..... ....+++.++..++.|++.||+||
T Consensus 79 ~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~L 153 (304)
T cd05101 79 KHKNIINLLGACTQ-----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYL 153 (304)
T ss_pred cCCCchheeEEEec-----CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHH
Confidence 79999999998543 4577999999999999999865321 113578889999999999999999
Q ss_pred hhcCCCCeeeccccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCCCCcCccccchhHHHHHH
Q 042634 248 HHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLL 319 (427)
Q Consensus 248 H~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ 319 (427)
| +.||+||||||+||+++.++.+||+|||.++..... ..++..|+|||++.+..++.++|||||||++|
T Consensus 154 H---~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ 230 (304)
T cd05101 154 A---SQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMW 230 (304)
T ss_pred H---HCCeeecccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHH
Confidence 9 899999999999999999999999999999865421 13456799999999888999999999999999
Q ss_pred HHHh-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCC
Q 042634 320 ETFT-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSS 398 (427)
Q Consensus 320 ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~ 398 (427)
|+++ |..||.... ..+......... +...+..++.++.+++.+||+
T Consensus 231 el~~~g~~p~~~~~-----~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~li~~cl~ 277 (304)
T cd05101 231 EIFTLGGSPYPGIP-----VEELFKLLKEGH----------------------------RMDKPANCTNELYMMMRDCWH 277 (304)
T ss_pred HHHcCCCCCcccCC-----HHHHHHHHHcCC----------------------------cCCCCCCCCHHHHHHHHHHcc
Confidence 9998 788886431 111111110000 000122356678999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHH
Q 042634 399 ELPRERMNMEEVAAQLLSFRNK 420 (427)
Q Consensus 399 ~dP~~Rpt~~ev~~~L~~~~~~ 420 (427)
.+|++|||+.|+++.|+++...
T Consensus 278 ~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 278 AIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred cChhhCCCHHHHHHHHHHHHHh
Confidence 9999999999999999988653
No 123
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.5e-33 Score=267.61 Aligned_cols=188 Identities=20% Similarity=0.257 Sum_probs=150.9
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecc
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrD 259 (427)
+||||+++++.+.. ....++||||+++|+|..++... ..+++..+..++.|++.||+||| +.||+|||
T Consensus 54 ~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~----~~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~d 121 (318)
T cd05570 54 KHPFLTQLHSCFQT-----KDRLFFVMEYVNGGDLMFHIQRS----GRFDEPRARFYAAEIVLGLQFLH---ERGIIYRD 121 (318)
T ss_pred CCCCccceeeEEEc-----CCEEEEEEcCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEccC
Confidence 79999999987543 56789999999999998887654 35899999999999999999999 89999999
Q ss_pred ccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 260 LKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 260 lkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
|||+||+++.++.+||+|||+++..... ..|+..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 122 lkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~- 200 (318)
T cd05570 122 LKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD- 200 (318)
T ss_pred CCHHHeEECCCCcEEecccCCCeecCcCCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC-
Confidence 9999999999999999999998753211 257889999999999999999999999999999999999997531
Q ss_pred CCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH-----H
Q 042634 334 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM-----E 408 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~-----~ 408 (427)
............ . ..+...+.++.+++.+||+.||++|||+ .
T Consensus 201 ----~~~~~~~i~~~~--------~---------------------~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~ 247 (318)
T cd05570 201 ----EDELFQSILEDE--------V---------------------RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQ 247 (318)
T ss_pred ----HHHHHHHHHcCC--------C---------------------CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHH
Confidence 111111110000 0 0112235568999999999999999999 7
Q ss_pred HHHHH
Q 042634 409 EVAAQ 413 (427)
Q Consensus 409 ev~~~ 413 (427)
++++.
T Consensus 248 ~ll~~ 252 (318)
T cd05570 248 DIKGH 252 (318)
T ss_pred HHhcC
Confidence 77653
No 124
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=3.4e-33 Score=256.15 Aligned_cols=193 Identities=22% Similarity=0.368 Sum_probs=152.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++++|.+++.... ..+++..++.++.|++.||.||| +.||+||
T Consensus 50 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~ 118 (252)
T cd05084 50 YSHPNIVRLIGVCTQ-----KQPIYIVMELVQGGDFLTFLRTEG---PRLKVKELIQMVENAAAGMEYLE---SKHCIHR 118 (252)
T ss_pred CCCCCcceEEEEEcC-----CCCeEEEEeeccCCcHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCcccc
Confidence 479999999988643 457899999999999999986432 34889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC--------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT--------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~--------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~ 329 (427)
||||+||+++.++.+||+|||.++...... ..+..|+|||.+.+..++.++|||||||++||+++ |..||.
T Consensus 119 dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~ 198 (252)
T cd05084 119 DLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYA 198 (252)
T ss_pred ccchheEEEcCCCcEEECccccCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcc
Confidence 999999999999999999999987654322 22346999999988889999999999999999998 888886
Q ss_pred cccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 330 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
..... ..........+ ...+..++.++.+++.+||+.+|++|||+.|
T Consensus 199 ~~~~~--~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ 245 (252)
T cd05084 199 NLSNQ--QTREAIEQGVR-------------------------------LPCPELCPDAVYRLMERCWEYDPGQRPSFST 245 (252)
T ss_pred ccCHH--HHHHHHHcCCC-------------------------------CCCcccCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 43110 00010000000 0012234567899999999999999999999
Q ss_pred HHHHHH
Q 042634 410 VAAQLL 415 (427)
Q Consensus 410 v~~~L~ 415 (427)
+.+.|+
T Consensus 246 ~~~~l~ 251 (252)
T cd05084 246 VHQELQ 251 (252)
T ss_pred HHHHHh
Confidence 999886
No 125
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=3.8e-33 Score=256.63 Aligned_cols=194 Identities=25% Similarity=0.401 Sum_probs=155.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+. ....++||||+++|+|.+++.... .+++..+..++.|++.|++||| ..+++||
T Consensus 53 l~h~~iv~~~~~~~------~~~~~~v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~ 119 (257)
T cd05060 53 LDHPCIVRLIGVCK------GEPLMLVMELAPLGPLLKYLKKRR----EIPVSDLKELAHQVAMGMAYLE---SKHFVHR 119 (257)
T ss_pred cCCCCeeeEEEEEc------CCceEEEEEeCCCCcHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHh---hcCeecc
Confidence 57999999988643 235789999999999999997653 4889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC---------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT---------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPT 328 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~---------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf 328 (427)
||||+||+++.++.+||+|||.++...... .++..|+|||.+.+..++.++|||||||++||+++ |..||
T Consensus 120 di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~ 199 (257)
T cd05060 120 DLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPY 199 (257)
T ss_pred CcccceEEEcCCCcEEeccccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCc
Confidence 999999999999999999999998653322 22357999999998899999999999999999998 99998
Q ss_pred CcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 329 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
..... ..+...+....+ ...+..++..+.+++.+||+.+|++|||+.
T Consensus 200 ~~~~~--~~~~~~~~~~~~-------------------------------~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ 246 (257)
T cd05060 200 GEMKG--AEVIAMLESGER-------------------------------LPRPEECPQEIYSIMLSCWKYRPEDRPTFS 246 (257)
T ss_pred ccCCH--HHHHHHHHcCCc-------------------------------CCCCCCCCHHHHHHHHHHhcCChhhCcCHH
Confidence 65321 111111111000 001223456789999999999999999999
Q ss_pred HHHHHHHHHH
Q 042634 409 EVAAQLLSFR 418 (427)
Q Consensus 409 ev~~~L~~~~ 418 (427)
++++.|+++.
T Consensus 247 ~l~~~l~~~~ 256 (257)
T cd05060 247 ELESTFRRDP 256 (257)
T ss_pred HHHHHHHhcc
Confidence 9999998763
No 126
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-34 Score=293.01 Aligned_cols=191 Identities=25% Similarity=0.317 Sum_probs=155.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
+.|||+|+++++-.. .+..+|.||||.+|+|.+.++-.+ ..++.-...+..|++.|+.||| ++|||||
T Consensus 1291 lnHpNlV~YyGVEvH-----Rekv~IFMEyC~~GsLa~ll~~gr----i~dE~vt~vyt~qll~gla~LH---~~gIVHR 1358 (1509)
T KOG4645|consen 1291 LNHPNLVRYYGVEVH-----REKVYIFMEYCEGGSLASLLEHGR----IEDEMVTRVYTKQLLEGLAYLH---EHGIVHR 1358 (1509)
T ss_pred ccCccccccCceeec-----HHHHHHHHHHhccCcHHHHHHhcc----hhhhhHHHHHHHHHHHHHHHHH---hcCceec
Confidence 789999999998333 567899999999999999987553 3667778889999999999999 9999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC----------CCccccccccccCCCC---cCccccchhHHHHHHHHHhCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT----------NNFFNFQIAEYGMGSE---VSTSGDVYSFGILLLETFTGK 325 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~----------~~~~~y~aPE~~~~~~---~~~~~DiwS~G~vl~ell~g~ 325 (427)
||||+||+++.+|.+|++|||.|+.+.... .||+.|||||++.+.. ...++||||+|||+.||+||+
T Consensus 1359 DIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGk 1438 (1509)
T KOG4645|consen 1359 DIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGK 1438 (1509)
T ss_pred CCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCC
Confidence 999999999999999999999998765432 8999999999998754 567899999999999999999
Q ss_pred CCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC
Q 042634 326 RPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM 405 (427)
Q Consensus 326 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp 405 (427)
.||......-..+........|. .|+....+-.+++.+|++.||++|.
T Consensus 1439 rPW~~~dne~aIMy~V~~gh~Pq--------------------------------~P~~ls~~g~dFle~Cl~~dP~~Rw 1486 (1509)
T KOG4645|consen 1439 RPWAELDNEWAIMYHVAAGHKPQ--------------------------------IPERLSSEGRDFLEHCLEQDPKMRW 1486 (1509)
T ss_pred CchhhccchhHHHhHHhccCCCC--------------------------------CchhhhHhHHHHHHHHHhcCchhhh
Confidence 99986533322222222222211 2333566678899999999999999
Q ss_pred CHHHHHHH
Q 042634 406 NMEEVAAQ 413 (427)
Q Consensus 406 t~~ev~~~ 413 (427)
++.|+++.
T Consensus 1487 ~~~qlle~ 1494 (1509)
T KOG4645|consen 1487 TASQLLEH 1494 (1509)
T ss_pred HHHHHHHh
Confidence 99888764
No 127
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1e-33 Score=269.59 Aligned_cols=188 Identities=24% Similarity=0.229 Sum_probs=149.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++|+|.+++... ..+++..++.++.||+.||+||| +.||+||
T Consensus 53 ~~h~~Iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~qi~~~L~~lH---~~giiHr 120 (325)
T cd05602 53 VKHPFLVGLHFSFQT-----ADKLYFVLDYINGGELFYHLQRE----RCFLEPRARFYAAEIASALGYLH---SLNIVYR 120 (325)
T ss_pred CCCCCCCceeEEEEc-----CCeEEEEEeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEec
Confidence 579999999887433 56789999999999999988654 34788899999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||+++.... ...|++.|+|||++.+..++.++||||+||++|||++|..||....
T Consensus 121 Dlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 200 (325)
T cd05602 121 DLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN 200 (325)
T ss_pred CCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCC
Confidence 9999999999999999999999975422 1268899999999999999999999999999999999999997531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
. .+.......... . .....+..+.+++.+|++.||.+||++.+.+.
T Consensus 201 ~-----~~~~~~i~~~~~--------~---------------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 201 T-----AEMYDNILNKPL--------Q---------------------LKPNITNSARHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred H-----HHHHHHHHhCCc--------C---------------------CCCCCCHHHHHHHHHHcccCHHHCCCCCCCHH
Confidence 1 111111110000 0 01123456789999999999999999875443
No 128
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=6.3e-33 Score=256.46 Aligned_cols=195 Identities=24% Similarity=0.421 Sum_probs=156.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. +...+++|||+++++|.+++.... ..+++..+..++.|++.|++||| +.+|+||
T Consensus 62 l~h~~i~~~~~~~~~-----~~~~~iv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~ 130 (266)
T cd05033 62 FDHPNIIRLEGVVTK-----SRPVMIITEYMENGSLDKFLREND---GKFTVGQLVGMLRGIASGMKYLS---EMNYVHR 130 (266)
T ss_pred CCCCCcceEeEEEec-----CCceEEEEEcCCCCCHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---hCCcccC
Confidence 569999999987533 567899999999999999986543 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~ 329 (427)
||||+||++++++.+||+|||.++..... ..++..|+|||.+.+..++.++||||||+++||+++ |..||.
T Consensus 131 di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~ 210 (266)
T cd05033 131 DLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYW 210 (266)
T ss_pred CCCcceEEEcCCCCEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCC
Confidence 99999999999999999999999876421 134467999999998899999999999999999998 999986
Q ss_pred cccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 330 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
..... ............ ..+..++..+.+++.+||+.+|++|||++|
T Consensus 211 ~~~~~--~~~~~~~~~~~~-------------------------------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e 257 (266)
T cd05033 211 DMSNQ--DVIKAVEDGYRL-------------------------------PPPMDCPSALYQLMLDCWQKDRNERPTFSQ 257 (266)
T ss_pred CCCHH--HHHHHHHcCCCC-------------------------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHH
Confidence 43111 111111000000 011234567899999999999999999999
Q ss_pred HHHHHHHH
Q 042634 410 VAAQLLSF 417 (427)
Q Consensus 410 v~~~L~~~ 417 (427)
|++.|+++
T Consensus 258 i~~~l~~~ 265 (266)
T cd05033 258 IVSTLDKM 265 (266)
T ss_pred HHHHHHhh
Confidence 99999875
No 129
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=3.6e-33 Score=263.03 Aligned_cols=196 Identities=25% Similarity=0.382 Sum_probs=155.5
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecc
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrD 259 (427)
+||||+++++.+.. +...+++|||+++|+|.++++.... ..+++.++..++.|++.||+||| +.+|+|+|
T Consensus 97 ~h~~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~i~~~~~--~~l~~~~~~~i~~~i~~~l~~lH---~~~ivH~d 166 (302)
T cd05055 97 NHENIVNLLGACTI-----GGPILVITEYCCYGDLLNFLRRKRE--SFLTLEDLLSFSYQVAKGMAFLA---SKNCIHRD 166 (302)
T ss_pred CCCCcceEEEEEec-----CCceEEEEEcCCCCcHHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeehhh
Confidence 79999999988543 4568999999999999999865332 33899999999999999999999 89999999
Q ss_pred ccCCceeeCCCCceEecccccccccCCcC--------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCc
Q 042634 260 LKPSNVLLDGELTAHVGDFGLAKFLPEAT--------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNE 330 (427)
Q Consensus 260 lkp~NIll~~~~~~kL~DFG~a~~~~~~~--------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~ 330 (427)
|||+||+++.++.+||+|||.++...... .++..|+|||.+.+..++.++||||+||++||+++ |..||..
T Consensus 167 lkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~ 246 (302)
T cd05055 167 LAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPG 246 (302)
T ss_pred hccceEEEcCCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCC
Confidence 99999999999999999999998653321 34567999999998889999999999999999998 9999875
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
..... .+........+. ..+...+.++.+++.+||+.+|++|||+.|+
T Consensus 247 ~~~~~-~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~el 294 (302)
T cd05055 247 MPVDS-KFYKLIKEGYRM-------------------------------AQPEHAPAEIYDIMKTCWDADPLKRPTFKQI 294 (302)
T ss_pred CCchH-HHHHHHHcCCcC-------------------------------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHH
Confidence 42111 111111100000 0011124568999999999999999999999
Q ss_pred HHHHHHH
Q 042634 411 AAQLLSF 417 (427)
Q Consensus 411 ~~~L~~~ 417 (427)
++.|+++
T Consensus 295 l~~l~~~ 301 (302)
T cd05055 295 VQLIGKQ 301 (302)
T ss_pred HHHHHhh
Confidence 9999874
No 130
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.4e-33 Score=269.44 Aligned_cols=192 Identities=22% Similarity=0.240 Sum_probs=149.2
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecc
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrD 259 (427)
+||+|+++++.+. .+...++||||+++|+|.+++... ..+++..+..++.||+.||+||| +.||+|||
T Consensus 63 ~~~~i~~~~~~~~-----~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrD 130 (332)
T cd05614 63 QSPFLVTLHYAFQ-----TEAKLHLILDYVSGGEMFTHLYQR----DNFSEDEVRFYSGEIILALEHLH---KLGIVYRD 130 (332)
T ss_pred CCCCcccEEEEEe-----cCCEEEEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcEecC
Confidence 6899999987743 356789999999999999988654 45899999999999999999999 89999999
Q ss_pred ccCCceeeCCCCceEecccccccccCCc-------CCCccccccccccCCC-CcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 260 LKPSNVLLDGELTAHVGDFGLAKFLPEA-------TNNFFNFQIAEYGMGS-EVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 260 lkp~NIll~~~~~~kL~DFG~a~~~~~~-------~~~~~~y~aPE~~~~~-~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
|||+|||++.++.+||+|||+++..... ..||..|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 131 lkp~Nili~~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~ 210 (332)
T cd05614 131 IKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLE 210 (332)
T ss_pred CCHHHeEECCCCCEEEeeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCC
Confidence 9999999999999999999999864221 2588999999998875 4789999999999999999999999743
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC-----C
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM-----N 406 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp-----t 406 (427)
.... ............ ++. .+...+..+.+++.+||+.||++|| +
T Consensus 211 ~~~~-~~~~~~~~~~~~------~~~-----------------------~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~ 260 (332)
T cd05614 211 GERN-TQSEVSRRILKC------DPP-----------------------FPSFIGPEAQDLLHKLLRKDPKKRLGAGPQG 260 (332)
T ss_pred CCCC-CHHHHHHHHhcC------CCC-----------------------CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCC
Confidence 2111 111111111000 000 1112345678999999999999999 6
Q ss_pred HHHHHHH
Q 042634 407 MEEVAAQ 413 (427)
Q Consensus 407 ~~ev~~~ 413 (427)
++|++++
T Consensus 261 ~~~~l~h 267 (332)
T cd05614 261 ASEIKEH 267 (332)
T ss_pred HHHHHcC
Confidence 7777753
No 131
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-33 Score=260.61 Aligned_cols=192 Identities=20% Similarity=0.325 Sum_probs=161.3
Q ss_pred CcccccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 042634 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255 (427)
Q Consensus 176 N~ll~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~i 255 (427)
-++.+|||||++|++ .+.+...|+|.|.-.+|+|++|+-++. ..+.+..+++++.||..|+.|+| ...|
T Consensus 71 MKLVQHpNiVRLYEV-----iDTQTKlyLiLELGD~GDl~DyImKHe---~Gl~E~La~kYF~QI~~AI~YCH---qLHV 139 (864)
T KOG4717|consen 71 MKLVQHPNIVRLYEV-----IDTQTKLYLILELGDGGDLFDYIMKHE---EGLNEDLAKKYFAQIVHAISYCH---QLHV 139 (864)
T ss_pred HHHhcCcCeeeeeeh-----hcccceEEEEEEecCCchHHHHHHhhh---ccccHHHHHHHHHHHHHHHHHHh---hhhh
Confidence 456789999999998 444778999999999999999997766 45899999999999999999999 7889
Q ss_pred eeccccCCceee-CCCCceEecccccccccCCcC-----CCccccccccccCCCCcC-ccccchhHHHHHHHHHhCCCCC
Q 042634 256 VHCDLKPSNVLL-DGELTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGMGSEVS-TSGDVYSFGILLLETFTGKRPT 328 (427)
Q Consensus 256 vHrDlkp~NIll-~~~~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~~~~~~-~~~DiwS~G~vl~ell~g~~pf 328 (427)
|||||||+||.+ ..-|-+||.|||++-....+. +|+..|.|||++.+..|+ +++||||+|||+|-+++|++||
T Consensus 140 VHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PF 219 (864)
T KOG4717|consen 140 VHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPF 219 (864)
T ss_pred hcccCCcceeEEeeecCceEeeeccccccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCcc
Confidence 999999999876 566899999999998776654 888999999999999995 6899999999999999999999
Q ss_pred CcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 329 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
+...+.+. +..+.|-.+ ..|.....+..+++.+|+..||++|.|.+
T Consensus 220 qeANDSET-------------LTmImDCKY---------------------tvPshvS~eCrdLI~sMLvRdPkkRAslE 265 (864)
T KOG4717|consen 220 QEANDSET-------------LTMIMDCKY---------------------TVPSHVSKECRDLIQSMLVRDPKKRASLE 265 (864)
T ss_pred ccccchhh-------------hhhhhcccc---------------------cCchhhhHHHHHHHHHHHhcCchhhccHH
Confidence 87533221 122222111 14556778889999999999999999999
Q ss_pred HHHH
Q 042634 409 EVAA 412 (427)
Q Consensus 409 ev~~ 412 (427)
||+.
T Consensus 266 eI~s 269 (864)
T KOG4717|consen 266 EIVS 269 (864)
T ss_pred HHhc
Confidence 9874
No 132
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=6e-33 Score=255.90 Aligned_cols=196 Identities=30% Similarity=0.456 Sum_probs=155.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. ....+++|||+++++|.+++..... ..+++..+..++.|++.|+.||| +.||+||
T Consensus 58 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~ 127 (261)
T cd05068 58 LRHPKLIQLYAVCTL-----EEPIYIVTELMKYGSLLEYLQGGAG--RALKLPQLIDMAAQVASGMAYLE---AQNYIHR 127 (261)
T ss_pred CCCCCccceeEEEec-----CCCeeeeeecccCCcHHHHHhccCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeec
Confidence 469999999987543 5568999999999999999865431 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC----C---CccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT----N---NFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~----~---~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~ 330 (427)
||||+||+++.++.+||+|||.++...... . .+..|+|||+..+..++.++|||||||++||+++ |+.||.+
T Consensus 128 dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 207 (261)
T cd05068 128 DLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPG 207 (261)
T ss_pred cCCcceEEEcCCCCEEECCcceEEEccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCC
Confidence 999999999999999999999998764322 2 2346999999998899999999999999999999 9999865
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
... ......+..... ...+..++..+.+++.+||+.+|++|||+.++
T Consensus 208 ~~~--~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l 254 (261)
T cd05068 208 MTN--AEVLQQVDQGYR-------------------------------MPCPPGCPKELYDIMLDCWKEDPDDRPTFETL 254 (261)
T ss_pred CCH--HHHHHHHHcCCC-------------------------------CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHH
Confidence 311 001111000000 00112245678999999999999999999999
Q ss_pred HHHHHHH
Q 042634 411 AAQLLSF 417 (427)
Q Consensus 411 ~~~L~~~ 417 (427)
++.|+++
T Consensus 255 ~~~l~~~ 261 (261)
T cd05068 255 QWKLEDF 261 (261)
T ss_pred HHHHhcC
Confidence 9999863
No 133
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.7e-33 Score=260.39 Aligned_cols=197 Identities=20% Similarity=0.379 Sum_probs=154.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccch------------hhhhccCHHHHHHHHHHHHHHHHH
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNR------------EALKNLNLLQRLSIAVDVASALDY 246 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~------------~~~~~l~~~~~~~~~~~i~~~L~~ 246 (427)
++||||+++++.+.. ....++++||+.+++|.+++.... .....+++..+..++.|++.||+|
T Consensus 65 l~h~~iv~~~~~~~~-----~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~ 139 (283)
T cd05091 65 LQHPNIVCLLGVVTK-----EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEF 139 (283)
T ss_pred CCCCCcCeEEEEEcC-----CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHH
Confidence 679999999998544 456789999999999998874211 111347888999999999999999
Q ss_pred HhhcCCCCeeeccccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCCCCcCccccchhHHHHH
Q 042634 247 LHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILL 318 (427)
Q Consensus 247 LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl 318 (427)
+| ++||+||||||+||++++++.+||+|||+++..... ..+++.|+|||.+.+..++.++|||||||++
T Consensus 140 lH---~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l 216 (283)
T cd05091 140 LS---SHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVL 216 (283)
T ss_pred HH---HcCccccccchhheEecCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHH
Confidence 99 899999999999999999999999999998865322 1345689999999888899999999999999
Q ss_pred HHHHh-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcC
Q 042634 319 LETFT-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCS 397 (427)
Q Consensus 319 ~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl 397 (427)
|||++ |..||.+... .+........... ..+..++..+.+++.+||
T Consensus 217 ~el~~~g~~p~~~~~~-----~~~~~~i~~~~~~----------------------------~~~~~~~~~~~~li~~cl 263 (283)
T cd05091 217 WEVFSYGLQPYCGYSN-----QDVIEMIRNRQVL----------------------------PCPDDCPAWVYTLMLECW 263 (283)
T ss_pred HHHHcCCCCCCCCCCH-----HHHHHHHHcCCcC----------------------------CCCCCCCHHHHHHHHHHh
Confidence 99998 8888865311 1111111111000 012335677899999999
Q ss_pred CCCCCCCCCHHHHHHHHHH
Q 042634 398 SELPRERMNMEEVAAQLLS 416 (427)
Q Consensus 398 ~~dP~~Rpt~~ev~~~L~~ 416 (427)
+.+|++|||++||++.|+.
T Consensus 264 ~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 264 NEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred CCCcccCCCHHHHHHHhhC
Confidence 9999999999999999864
No 134
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=4.3e-33 Score=258.79 Aligned_cols=191 Identities=22% Similarity=0.321 Sum_probs=148.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. +...++||||+++|+|..++.... ..+++..+..++.|+++||+||| ++||+||
T Consensus 73 l~h~niv~~~~~~~~-----~~~~~lv~ey~~~g~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~ 141 (274)
T cd05076 73 VSHIHLAFVHGVCVR-----GSENIMVEEFVEHGPLDVCLRKEK---GRVPVAWKITVAQQLASALSYLE---DKNLVHG 141 (274)
T ss_pred CCCCCeeeEEEEEEe-----CCceEEEEecCCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---cCCccCC
Confidence 579999999998654 457799999999999998886432 45889999999999999999999 8999999
Q ss_pred cccCCceeeCCCC-------ceEecccccccccCC--cCCCccccccccccCC-CCcCccccchhHHHHHHHHH-hCCCC
Q 042634 259 DLKPSNVLLDGEL-------TAHVGDFGLAKFLPE--ATNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETF-TGKRP 327 (427)
Q Consensus 259 Dlkp~NIll~~~~-------~~kL~DFG~a~~~~~--~~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell-~g~~p 327 (427)
||||+||+++..+ .+|++|||.+..... ...++..|+|||.+.+ ..++.++|||||||++||++ +|..|
T Consensus 142 dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p 221 (274)
T cd05076 142 NVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVP 221 (274)
T ss_pred CCCcccEEEeccCcccCccceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999997543 489999999865432 2356788999998865 56899999999999999995 69999
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
|...... ........... .+.....++.+++.+||+.+|++|||+
T Consensus 222 ~~~~~~~--~~~~~~~~~~~---------------------------------~~~~~~~~~~~li~~cl~~~p~~Rps~ 266 (274)
T cd05076 222 LKERTPS--EKERFYEKKHR---------------------------------LPEPSCKELATLISQCLTYEPTQRPSF 266 (274)
T ss_pred ccccChH--HHHHHHHhccC---------------------------------CCCCCChHHHHHHHHHcccChhhCcCH
Confidence 8653211 11111100000 000112358899999999999999999
Q ss_pred HHHHHHHH
Q 042634 408 EEVAAQLL 415 (427)
Q Consensus 408 ~ev~~~L~ 415 (427)
.||++.|+
T Consensus 267 ~~il~~L~ 274 (274)
T cd05076 267 RTILRDLT 274 (274)
T ss_pred HHHHHhhC
Confidence 99999873
No 135
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.4e-33 Score=281.89 Aligned_cols=199 Identities=21% Similarity=0.254 Sum_probs=154.5
Q ss_pred cccccchhhhccccccCCCC---CCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 042634 179 IRHRNLVKIITSCASVDFQG---NDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~i 255 (427)
.+|+|+++....+...+... ....++||||+++|+|.+++.........+++..+..++.|++.||+|+| +.||
T Consensus 88 ~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH---~~~I 164 (496)
T PTZ00283 88 CDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVH---SKHM 164 (496)
T ss_pred CCCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCE
Confidence 46899998776543322111 11357999999999999998754433356899999999999999999999 8999
Q ss_pred eeccccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCC
Q 042634 256 VHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 256 vHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~p 327 (427)
+||||||+|||++.++.+||+|||+++..... ..||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 165 iHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~P 244 (496)
T PTZ00283 165 IHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRP 244 (496)
T ss_pred ecCCCCHHHEEEeCCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 99999999999999999999999999865321 2688899999999999999999999999999999999999
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
|... .....+........ + ..+..++.++.+++.+||+.||++|||+
T Consensus 245 f~~~-----~~~~~~~~~~~~~~----~------------------------~~~~~~~~~l~~li~~~L~~dP~~RPs~ 291 (496)
T PTZ00283 245 FDGE-----NMEEVMHKTLAGRY----D------------------------PLPPSISPEMQEIVTALLSSDPKRRPSS 291 (496)
T ss_pred CCCC-----CHHHHHHHHhcCCC----C------------------------CCCCCCCHHHHHHHHHHcccChhhCcCH
Confidence 9653 11122111111000 0 0122345678999999999999999999
Q ss_pred HHHHHH
Q 042634 408 EEVAAQ 413 (427)
Q Consensus 408 ~ev~~~ 413 (427)
.|++++
T Consensus 292 ~ell~~ 297 (496)
T PTZ00283 292 SKLLNM 297 (496)
T ss_pred HHHHhC
Confidence 999864
No 136
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.8e-33 Score=262.64 Aligned_cols=201 Identities=23% Similarity=0.411 Sum_probs=158.0
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh------------hhhccCHHHHHHHHHHHHHHHHHH
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE------------ALKNLNLLQRLSIAVDVASALDYL 247 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~~~~~i~~~L~~L 247 (427)
+||||+++++.+.. +...+++|||+++|+|.+++..... ....+++.+++.++.|++.||+||
T Consensus 76 ~h~~iv~~~~~~~~-----~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~l 150 (314)
T cd05099 76 KHKNIINLLGVCTQ-----EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYL 150 (314)
T ss_pred CCCCeeeEEEEEcc-----CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHH
Confidence 69999999998643 4568999999999999999865321 113588899999999999999999
Q ss_pred hhcCCCCeeeccccCCceeeCCCCceEecccccccccCCcC--------CCccccccccccCCCCcCccccchhHHHHHH
Q 042634 248 HHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT--------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLL 319 (427)
Q Consensus 248 H~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~--------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ 319 (427)
| ++|++||||||+||+++.++.+||+|||.++...... .++..|+|||++.+..++.++|||||||++|
T Consensus 151 H---~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~ 227 (314)
T cd05099 151 E---SRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMW 227 (314)
T ss_pred H---HCCeeeccccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHH
Confidence 9 8999999999999999999999999999998654311 2335799999998888999999999999999
Q ss_pred HHHh-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCC
Q 042634 320 ETFT-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSS 398 (427)
Q Consensus 320 ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~ 398 (427)
|+++ |..||..... ..+......... ...+..++.++.+++.+||+
T Consensus 228 el~~~g~~p~~~~~~--~~~~~~~~~~~~-------------------------------~~~~~~~~~~l~~li~~cl~ 274 (314)
T cd05099 228 EIFTLGGSPYPGIPV--EELFKLLREGHR-------------------------------MDKPSNCTHELYMLMRECWH 274 (314)
T ss_pred HHHhCCCCCCCCCCH--HHHHHHHHcCCC-------------------------------CCCCCCCCHHHHHHHHHHcC
Confidence 9999 8889865311 111111110000 00122345678899999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHH
Q 042634 399 ELPRERMNMEEVAAQLLSFRNKL 421 (427)
Q Consensus 399 ~dP~~Rpt~~ev~~~L~~~~~~~ 421 (427)
.+|++|||+.|+++.|+++....
T Consensus 275 ~~p~~Rps~~~ll~~l~~~~~~~ 297 (314)
T cd05099 275 AVPTQRPTFKQLVEALDKVLAAV 297 (314)
T ss_pred CCcccCcCHHHHHHHHHHHHHHh
Confidence 99999999999999999987644
No 137
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=3.6e-33 Score=259.55 Aligned_cols=196 Identities=23% Similarity=0.379 Sum_probs=154.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhh------hhccCHHHHHHHHHHHHHHHHHHhhcCC
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREA------LKNLNLLQRLSIAVDVASALDYLHHYCE 252 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~------~~~l~~~~~~~~~~~i~~~L~~LH~~~~ 252 (427)
++|||++++++.+.. ....++||||+++|+|.+++...... ...+++..+..++.|++.||.||| +
T Consensus 66 ~~~~~i~~~~~~~~~-----~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~ 137 (277)
T cd05032 66 FNCHHVVRLLGVVST-----GQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA---A 137 (277)
T ss_pred CCCCceeEEEEEEcC-----CCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHH---h
Confidence 579999999998544 46789999999999999998643211 123778899999999999999999 8
Q ss_pred CCeeeccccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCCCCcCccccchhHHHHHHHHHh-
Q 042634 253 TPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT- 323 (427)
Q Consensus 253 ~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~- 323 (427)
.+|+||||||+||+++.++.+||+|||.++..... ..++..|+|||.+....++.++|||||||++||+++
T Consensus 138 ~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~ 217 (277)
T cd05032 138 KKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATL 217 (277)
T ss_pred CCccccccChheEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhcc
Confidence 99999999999999999999999999998764322 145678999999988889999999999999999998
Q ss_pred CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCC
Q 042634 324 GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRE 403 (427)
Q Consensus 324 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~ 403 (427)
|..||..... ....+....... ...+..++.++.+++.+||+.+|++
T Consensus 218 g~~p~~~~~~--~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~li~~~l~~~p~~ 264 (277)
T cd05032 218 AEQPYQGLSN--EEVLKFVIDGGH-------------------------------LDLPENCPDKLLELMRMCWQYNPKM 264 (277)
T ss_pred CCCCCccCCH--HHHHHHHhcCCC-------------------------------CCCCCCCCHHHHHHHHHHcCCChhh
Confidence 9999864211 111111110000 0011223567899999999999999
Q ss_pred CCCHHHHHHHHH
Q 042634 404 RMNMEEVAAQLL 415 (427)
Q Consensus 404 Rpt~~ev~~~L~ 415 (427)
|||+.|+++.|+
T Consensus 265 Rpt~~~l~~~l~ 276 (277)
T cd05032 265 RPTFLEIVSSLK 276 (277)
T ss_pred CCCHHHHHHHhc
Confidence 999999999886
No 138
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=5.2e-33 Score=255.28 Aligned_cols=192 Identities=21% Similarity=0.287 Sum_probs=154.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. +...++||||+++++|.+++..... ..+++..+..++.|++.||.||| +.|++||
T Consensus 56 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~~l~~al~~lH---~~~i~h~ 125 (256)
T cd08529 56 LDSSYIIRYYESFLD-----KGKLNIVMEYAENGDLHKLLKMQRG--RPLPEDQVWRFFIQILLGLAHLH---SKKILHR 125 (256)
T ss_pred cCCCCeehheeeecc-----CCEEEEEEEeCCCCcHHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCcccC
Confidence 579999999988543 4678999999999999999875422 46889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC------CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||.++...... .++..|+|||+..+..++.++|||||||++|||++|+.||....
T Consensus 126 dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 205 (256)
T cd08529 126 DIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANN 205 (256)
T ss_pred CCCcceEEEeCCCCEEEcccccceeccCccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999999988754432 56778999999999889999999999999999999999997532
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
. ........... .. ..+...+.++.+++.+||+.+|++||++.|+++
T Consensus 206 ~-----~~~~~~~~~~~----~~------------------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 206 Q-----GALILKIIRGV----FP------------------------PVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred H-----HHHHHHHHcCC----CC------------------------CCccccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 1 11111110000 00 011234567899999999999999999999986
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
.
T Consensus 253 ~ 253 (256)
T cd08529 253 N 253 (256)
T ss_pred C
Confidence 4
No 139
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=3.9e-33 Score=256.39 Aligned_cols=192 Identities=28% Similarity=0.450 Sum_probs=152.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++++|.+++.... ..+++..++.++.|++.|++||| +.|++||
T Consensus 56 l~~~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~ 124 (256)
T cd05059 56 LSHPNLVQLYGVCTK-----QRPIFIVTEYMANGCLLNYLRERK---GKLGTEWLLDMCSDVCEAMEYLE---SNGFIHR 124 (256)
T ss_pred CCCCCEEEEEEEEcC-----CCceEEEEecCCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---HCCcccc
Confidence 569999999887533 456899999999999999986543 35889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC-------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT-------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~-------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~ 330 (427)
||||+||+++.++.+||+|||.++...... .++..|+|||.+.+..++.++|||||||++||+++ |+.||..
T Consensus 125 dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 204 (256)
T cd05059 125 DLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYER 204 (256)
T ss_pred cccHhhEEECCCCcEEECCcccceecccccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCC
Confidence 999999999999999999999998654322 23347999999998899999999999999999999 8999865
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
.... ........... ...+..++.++.+++.+||+.+|++|||+.|+
T Consensus 205 ~~~~--~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~ 251 (256)
T cd05059 205 FSNS--EVVESVSAGYR-------------------------------LYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKL 251 (256)
T ss_pred CCHH--HHHHHHHcCCc-------------------------------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHH
Confidence 3111 11111100000 00112246679999999999999999999999
Q ss_pred HHHH
Q 042634 411 AAQL 414 (427)
Q Consensus 411 ~~~L 414 (427)
++.|
T Consensus 252 l~~l 255 (256)
T cd05059 252 LSQL 255 (256)
T ss_pred HHHh
Confidence 9876
No 140
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=5.3e-33 Score=257.55 Aligned_cols=197 Identities=23% Similarity=0.381 Sum_probs=157.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. ...++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.|++||
T Consensus 64 ~~h~~i~~~~~~~~~------~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~l~~~l~~lH---~~~~~H~ 131 (270)
T cd05056 64 FDHPHIVKLIGVITE------NPVWIVMELAPLGELRSYLQVNK---YSLDLASLILYSYQLSTALAYLE---SKRFVHR 131 (270)
T ss_pred CCCCchhceeEEEcC------CCcEEEEEcCCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeecc
Confidence 479999999987543 35689999999999999986543 34899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC-------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT-------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~-------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~ 330 (427)
||||+||+++.++.+||+|||+++...... .++..|+|||.+....++.++|||||||++||+++ |..||..
T Consensus 132 dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~ 211 (270)
T cd05056 132 DIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQG 211 (270)
T ss_pred ccChheEEEecCCCeEEccCceeeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCC
Confidence 999999999999999999999998654322 23457999999988889999999999999999986 9999975
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
..... ......... +...+..++.++.+++.+||..+|++|||+.|+
T Consensus 212 ~~~~~--~~~~~~~~~-------------------------------~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~ 258 (270)
T cd05056 212 VKNND--VIGRIENGE-------------------------------RLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTEL 258 (270)
T ss_pred CCHHH--HHHHHHcCC-------------------------------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 42111 101000000 000122346678999999999999999999999
Q ss_pred HHHHHHHHHH
Q 042634 411 AAQLLSFRNK 420 (427)
Q Consensus 411 ~~~L~~~~~~ 420 (427)
++.|+++.++
T Consensus 259 ~~~l~~~~~~ 268 (270)
T cd05056 259 KAQLSDILQE 268 (270)
T ss_pred HHHHHHHHhc
Confidence 9999998764
No 141
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=4.9e-34 Score=270.93 Aligned_cols=185 Identities=24% Similarity=0.257 Sum_probs=148.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. +...++||||+++|+|.+++... ..+++..+..++.|++.||+||| +.||+||
T Consensus 55 l~h~niv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~ 122 (318)
T cd05582 55 VNHPFIVKLHYAFQT-----EGKLYLILDFLRGGDLFTRLSKE----VMFTEEDVKFYLAELALALDHLH---SLGIIYR 122 (318)
T ss_pred CCCCCcccEEEEEEc-----CCEEEEEEcCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCEecC
Confidence 479999999887543 56789999999999999988654 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||+++..... ..|+..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 123 dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~ 202 (318)
T cd05582 123 DLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKD 202 (318)
T ss_pred CCCHHHeEECCCCcEEEeeccCCcccCCCCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCC
Confidence 99999999999999999999999865333 257889999999998889999999999999999999999997531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
. ........... . ..+...+..+.+++++||+.||++|||+.+
T Consensus 203 ~-----~~~~~~i~~~~--------~---------------------~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 203 R-----KETMTMILKAK--------L---------------------GMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred H-----HHHHHHHHcCC--------C---------------------CCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 1 11111110000 0 011223456789999999999999999655
No 142
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1e-32 Score=254.99 Aligned_cols=202 Identities=20% Similarity=0.274 Sum_probs=159.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|+|+++.++.+.. ....++||||+++|+|.+++.........+++.++..++.|++.|+.||| +.||+||
T Consensus 59 ~~~~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~ 130 (267)
T cd08224 59 LDHPNVIKYLASFIE-----NNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMH---SKRIMHR 130 (267)
T ss_pred CCCCCeeeeeeeeec-----CCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecC
Confidence 469999999988543 45789999999999999988643222245889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||.++..... ..++..|+|||.+.+..++.++|||||||++|++++|+.||....
T Consensus 131 dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 210 (267)
T cd08224 131 DIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK 210 (267)
T ss_pred CcChhhEEECCCCcEEEeccceeeeccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC
Confidence 99999999999999999999998765432 256778999999998889999999999999999999999986432
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
....+......... .........+.++.+++.+||+.+|++|||+.+|++
T Consensus 211 ---~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 211 ---MNLYSLCKKIEKCD---------------------------YPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred ---ccHHHHHhhhhcCC---------------------------CCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 11111111100000 000112245667899999999999999999999999
Q ss_pred HHHHHH
Q 042634 413 QLLSFR 418 (427)
Q Consensus 413 ~L~~~~ 418 (427)
.|+++.
T Consensus 261 ~~~~~~ 266 (267)
T cd08224 261 VAKEMH 266 (267)
T ss_pred HHHHhc
Confidence 999874
No 143
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.1e-33 Score=262.14 Aligned_cols=201 Identities=23% Similarity=0.400 Sum_probs=158.4
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh------------hhhccCHHHHHHHHHHHHHHHHHH
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE------------ALKNLNLLQRLSIAVDVASALDYL 247 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~~~~~i~~~L~~L 247 (427)
+||||+++++.+.. +...++||||+++|+|.+++..... ....+++.+++.++.|++.||+||
T Consensus 82 ~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~l 156 (307)
T cd05098 82 KHKNIINLLGACTQ-----DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYL 156 (307)
T ss_pred CCCCEeeEEEEEec-----CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHH
Confidence 69999999998644 4578999999999999999865321 113488899999999999999999
Q ss_pred hhcCCCCeeeccccCCceeeCCCCceEecccccccccCCcC--------CCccccccccccCCCCcCccccchhHHHHHH
Q 042634 248 HHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT--------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLL 319 (427)
Q Consensus 248 H~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~--------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ 319 (427)
| +.|++||||||+||+++.++.+||+|||.++...... .++..|+|||++.+..++.++|||||||++|
T Consensus 157 H---~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ 233 (307)
T cd05098 157 A---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLW 233 (307)
T ss_pred H---HCCcccccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHH
Confidence 9 8999999999999999999999999999997653211 2345799999999888999999999999999
Q ss_pred HHHh-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCC
Q 042634 320 ETFT-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSS 398 (427)
Q Consensus 320 ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~ 398 (427)
||++ |..||.... ..+......... ....+..++.++.+++.+||+
T Consensus 234 el~~~g~~p~~~~~-----~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~li~~~l~ 280 (307)
T cd05098 234 EIFTLGGSPYPGVP-----VEELFKLLKEGH----------------------------RMDKPSNCTNELYMMMRDCWH 280 (307)
T ss_pred HHHcCCCCCCCcCC-----HHHHHHHHHcCC----------------------------CCCCCCcCCHHHHHHHHHHcc
Confidence 9998 888885421 111111100000 000122345678899999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHH
Q 042634 399 ELPRERMNMEEVAAQLLSFRNKL 421 (427)
Q Consensus 399 ~dP~~Rpt~~ev~~~L~~~~~~~ 421 (427)
.+|++|||+.||++.|+++.+..
T Consensus 281 ~~p~~Rps~~evl~~l~~~~~~~ 303 (307)
T cd05098 281 AVPSQRPTFKQLVEDLDRILALT 303 (307)
T ss_pred cChhhCcCHHHHHHHHHHHHHHh
Confidence 99999999999999999987653
No 144
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6e-33 Score=253.11 Aligned_cols=192 Identities=25% Similarity=0.317 Sum_probs=157.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||-+..+|.. |+.....|+|||||+||+|..+.+++.. +.+++..++.++.+++.||+||| -.|||.|
T Consensus 134 lDHPFlPTLYa~-----fet~~~~cl~meyCpGGdL~~LrqkQp~--~~fse~~aRFYaAEvl~ALEYLH---mlGivYR 203 (459)
T KOG0610|consen 134 LDHPFLPTLYAS-----FETDKYSCLVMEYCPGGDLHSLRQKQPG--KRFSESAARFYAAEVLLALEYLH---MLGIVYR 203 (459)
T ss_pred cCCCccchhhhe-----eeccceeEEEEecCCCccHHHHHhhCCC--CccchhhHHHHHHHHHHHHHHHH---hhceeec
Confidence 789999999998 4447789999999999999999887765 77999999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccC------------------------------------Cc---------------
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLP------------------------------------EA--------------- 287 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~------------------------------------~~--------------- 287 (427)
||||+||||-++|++.|+||.++.... ..
T Consensus 204 DLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~ 283 (459)
T KOG0610|consen 204 DLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPEL 283 (459)
T ss_pred cCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhh
Confidence 999999999999999999998774210 00
Q ss_pred -----------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhcccchhcccCc
Q 042634 288 -----------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDP 356 (427)
Q Consensus 288 -----------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (427)
-+||-.|.|||++.+...+.++|+|+|||++|||+.|..||.+.. ...++...+...+.
T Consensus 284 ~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~-~~~Tl~NIv~~~l~--------- 353 (459)
T KOG0610|consen 284 VAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSN-NKETLRNIVGQPLK--------- 353 (459)
T ss_pred hcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCC-chhhHHHHhcCCCc---------
Confidence 067888999999999999999999999999999999999998753 33334333332211
Q ss_pred cccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC----HHHHHH
Q 042634 357 VLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN----MEEVAA 412 (427)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt----~~ev~~ 412 (427)
. . ...+.+..+.+||++.|..||.+|-- ++||-+
T Consensus 354 ---F----------------p---~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~ 391 (459)
T KOG0610|consen 354 ---F----------------P---EEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKR 391 (459)
T ss_pred ---C----------------C---CCCcchhHHHHHHHHHhccChhhhhccccchHHhhc
Confidence 0 0 01134566899999999999999987 777654
No 145
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.98 E-value=1.8e-32 Score=253.82 Aligned_cols=200 Identities=23% Similarity=0.366 Sum_probs=147.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. ....++||||+++|+|.+++.+.......+++..+..++.|++.||+||| +.+++||
T Consensus 52 l~h~~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~ 123 (268)
T cd05086 52 LQHPNILQCLGQCVE-----AIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMH---KHNFLHS 123 (268)
T ss_pred cCCcchhheEEEecC-----CCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCeecc
Confidence 579999999998654 45689999999999999998754322244677788899999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC--------cCCCccccccccccCC-------CCcCccccchhHHHHHHHHHh
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE--------ATNNFFNFQIAEYGMG-------SEVSTSGDVYSFGILLLETFT 323 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~--------~~~~~~~y~aPE~~~~-------~~~~~~~DiwS~G~vl~ell~ 323 (427)
||||+|||++.++.+||+|||++..... ...++..|+|||++.. ..++.++|||||||++|||++
T Consensus 124 dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~ 203 (268)
T cd05086 124 DLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFE 203 (268)
T ss_pred CCccceEEEcCCccEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHh
Confidence 9999999999999999999999864321 2256778999998743 245789999999999999997
Q ss_pred -CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCC
Q 042634 324 -GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPR 402 (427)
Q Consensus 324 -g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~ 402 (427)
|..||..... ...+...... ......++.+ .......+.+++..|| .+|+
T Consensus 204 ~~~~p~~~~~~-~~~~~~~~~~----~~~~~~~~~~-----------------------~~~~~~~~~~l~~~c~-~~P~ 254 (268)
T cd05086 204 NAAQPYSHLSD-REVLNHVIKD----QQVKLFKPQL-----------------------ELPYSERWYEVLQFCW-LSPE 254 (268)
T ss_pred CCCCCCCCCCH-HHHHHHHHhh----cccccCCCcc-----------------------CCCCcHHHHHHHHHHh-hCcc
Confidence 5678754311 1111111111 0011111110 0112345788999999 6799
Q ss_pred CCCCHHHHHHHHH
Q 042634 403 ERMNMEEVAAQLL 415 (427)
Q Consensus 403 ~Rpt~~ev~~~L~ 415 (427)
+|||++||++.|.
T Consensus 255 ~Rp~~~~i~~~l~ 267 (268)
T cd05086 255 KRATAEEVHRLLT 267 (268)
T ss_pred cCCCHHHHHHHhc
Confidence 9999999998773
No 146
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.98 E-value=7.8e-33 Score=258.28 Aligned_cols=197 Identities=24% Similarity=0.414 Sum_probs=153.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccch-------------hhhhccCHHHHHHHHHHHHHHHH
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNR-------------EALKNLNLLQRLSIAVDVASALD 245 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-------------~~~~~l~~~~~~~~~~~i~~~L~ 245 (427)
++|||++++++.+.. ....++||||+++++|.+++.... .....+++.+++.++.|++.||+
T Consensus 64 l~h~niv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~ 138 (283)
T cd05090 64 LHHPNIVCLLGVVTQ-----EQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGME 138 (283)
T ss_pred CCCCCeeeEEEEEec-----CCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHH
Confidence 579999999987433 557899999999999999874221 01134788999999999999999
Q ss_pred HHhhcCCCCeeeccccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCCCCcCccccchhHHHH
Q 042634 246 YLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFGIL 317 (427)
Q Consensus 246 ~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~v 317 (427)
||| ++||+||||||+||++++++.+||+|||+++..... ..++..|+|||++.+..++.++|||||||+
T Consensus 139 ~lH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i 215 (283)
T cd05090 139 YLS---SHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVV 215 (283)
T ss_pred HHH---hcCeehhccccceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHH
Confidence 999 899999999999999999999999999999865322 134567999999988889999999999999
Q ss_pred HHHHHh-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhc
Q 042634 318 LLETFT-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTC 396 (427)
Q Consensus 318 l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c 396 (427)
+|||++ |..||.+.. ...+.+.+...... ..+..++.++.+++.+|
T Consensus 216 l~el~~~g~~p~~~~~--~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~li~~c 262 (283)
T cd05090 216 LWEIFSFGLQPYYGFS--NQEVIEMVRKRQLL-------------------------------PCSEDCPPRMYSLMTEC 262 (283)
T ss_pred HHHHHcCCCCCCCCCC--HHHHHHHHHcCCcC-------------------------------CCCCCCCHHHHHHHHHH
Confidence 999998 999986531 11111111110000 01123456789999999
Q ss_pred CCCCCCCCCCHHHHHHHHHH
Q 042634 397 SSELPRERMNMEEVAAQLLS 416 (427)
Q Consensus 397 l~~dP~~Rpt~~ev~~~L~~ 416 (427)
|+.||++||++.+|.+.|..
T Consensus 263 l~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 263 WQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred cccCcccCcCHHHHHHHhhc
Confidence 99999999999999998864
No 147
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.98 E-value=2.8e-33 Score=266.31 Aligned_cols=183 Identities=22% Similarity=0.231 Sum_probs=146.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+||+++++.+.+.. ....++||||+++|+|.+++... ..+++..+..++.|++.||+||| +.||+||
T Consensus 58 ~~~~~i~~~~~~~~~-----~~~~~lv~E~~~~g~L~~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHr 125 (323)
T cd05616 58 GKPPFLTQLHSCFQT-----MDRLYFVMEYVNGGDLMYQIQQV----GRFKEPHAVFYAAEIAIGLFFLH---SKGIIYR 125 (323)
T ss_pred cCCCeEeeEEEEEec-----CCEEEEEEcCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCEEec
Confidence 368888888877433 56789999999999999888654 34889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+|||++.++.+||+|||+++.... ...||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 126 Dlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~ 205 (323)
T cd05616 126 DLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED 205 (323)
T ss_pred CCCHHHeEECCCCcEEEccCCCceecCCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCC
Confidence 9999999999999999999999975421 2268899999999999999999999999999999999999997531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
. ....+.+.. .. . ..+...+.++.+++.+|++.||++|++.
T Consensus 206 ~--~~~~~~i~~---~~--------~---------------------~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 206 E--DELFQSIME---HN--------V---------------------AYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred H--HHHHHHHHh---CC--------C---------------------CCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 1 111111100 00 0 0112234567899999999999999985
No 148
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.98 E-value=5e-33 Score=274.63 Aligned_cols=224 Identities=20% Similarity=0.199 Sum_probs=150.9
Q ss_pred cccccchhhhccccccCCC---CCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 042634 179 IRHRNLVKIITSCASVDFQ---GNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~i 255 (427)
++|||||++++.+....+. .....++||||++ +++.+++.........+++..++.++.||+.||+||| +.||
T Consensus 116 l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH---~~~I 191 (440)
T PTZ00036 116 LNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIH---SKFI 191 (440)
T ss_pred cCCCCCcceeeeEeecccccCCCceEEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCE
Confidence 5799999988765332221 1234678999995 5777766533222356899999999999999999999 8999
Q ss_pred eeccccCCceeeCCCC-ceEecccccccccCCc-----CCCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCC
Q 042634 256 VHCDLKPSNVLLDGEL-TAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPT 328 (427)
Q Consensus 256 vHrDlkp~NIll~~~~-~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf 328 (427)
+||||||+|||++.++ .+||+|||+|+..... ..+++.|+|||++.+ ..++.++|||||||++|||++|.+||
T Consensus 192 iHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf 271 (440)
T PTZ00036 192 CHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIF 271 (440)
T ss_pred ecCCcCHHHEEEcCCCCceeeeccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999999998664 7999999999865432 267889999999876 46899999999999999999999999
Q ss_pred CcccCCCccHHHHHHHhcccchhc--ccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC
Q 042634 329 NEMFTGNLTLHNFVKEALPERLAE--IVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN 406 (427)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt 406 (427)
.+.... ..+...+.....+.... ...+.... .... ...........+...+.++.+++.+||+.||.+|||
T Consensus 272 ~~~~~~-~~~~~i~~~~~~p~~~~~~~~~~~~~~----~~~~--~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~t 344 (440)
T PTZ00036 272 SGQSSV-DQLVRIIQVLGTPTEDQLKEMNPNYAD----IKFP--DVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLN 344 (440)
T ss_pred CCCChH-HHHHHHHHHhCCCCHHHHHHhchhhhc----ccCC--ccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcC
Confidence 753211 11222211111110000 00000000 0000 000000000112234567899999999999999999
Q ss_pred HHHHHHH
Q 042634 407 MEEVAAQ 413 (427)
Q Consensus 407 ~~ev~~~ 413 (427)
+.|++++
T Consensus 345 a~e~l~h 351 (440)
T PTZ00036 345 PIEALAD 351 (440)
T ss_pred HHHHhCC
Confidence 9999854
No 149
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.98 E-value=3.8e-33 Score=260.04 Aligned_cols=196 Identities=27% Similarity=0.450 Sum_probs=153.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhh-----------hhccCHHHHHHHHHHHHHHHHHH
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREA-----------LKNLNLLQRLSIAVDVASALDYL 247 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-----------~~~l~~~~~~~~~~~i~~~L~~L 247 (427)
++||||+++++.+.. ....+++|||+++++|.+++...... ...+++..++.++.|++.|++||
T Consensus 64 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~L 138 (280)
T cd05092 64 LQHQHIVRFYGVCTE-----GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYL 138 (280)
T ss_pred CCCCCCceEEEEEec-----CCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHH
Confidence 579999999887543 45679999999999999988653210 12478899999999999999999
Q ss_pred hhcCCCCeeeccccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCCCCcCccccchhHHHHHH
Q 042634 248 HHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLL 319 (427)
Q Consensus 248 H~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ 319 (427)
| +.|++||||||+||++++++.+||+|||+++..... ..++..|+|||++.+..++.++|||||||++|
T Consensus 139 H---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 215 (280)
T cd05092 139 A---SLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLW 215 (280)
T ss_pred H---HCCeecccccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHH
Confidence 9 899999999999999999999999999999754321 13456799999999889999999999999999
Q ss_pred HHHh-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCC
Q 042634 320 ETFT-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSS 398 (427)
Q Consensus 320 ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~ 398 (427)
||++ |..||...... ..........+ ...+..++..+.+++.+||+
T Consensus 216 el~~~g~~p~~~~~~~--~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~li~~cl~ 262 (280)
T cd05092 216 EIFTYGKQPWYQLSNT--EAIECITQGRE-------------------------------LERPRTCPPEVYAIMQGCWQ 262 (280)
T ss_pred HHHcCCCCCCccCCHH--HHHHHHHcCcc-------------------------------CCCCCCCCHHHHHHHHHHcc
Confidence 9998 89998643111 01000000000 00112345668999999999
Q ss_pred CCCCCCCCHHHHHHHHH
Q 042634 399 ELPRERMNMEEVAAQLL 415 (427)
Q Consensus 399 ~dP~~Rpt~~ev~~~L~ 415 (427)
.||++|||++||++.|+
T Consensus 263 ~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 263 REPQQRMVIKDIHSRLQ 279 (280)
T ss_pred CChhhCCCHHHHHHHHh
Confidence 99999999999999886
No 150
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.98 E-value=2.8e-33 Score=266.71 Aligned_cols=189 Identities=22% Similarity=0.277 Sum_probs=147.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+||+|+++++.+.. ....++||||+++|+|..++... ..+++..++.++.|++.||+||| +.||+||
T Consensus 53 ~~~~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~----~~l~~~~~~~~~~qi~~al~~lH---~~~ivHr 120 (327)
T cd05617 53 SSNPFLVGLHSCFQT-----TSRLFLVIEYVNGGDLMFHMQRQ----RKLPEEHARFYAAEICIALNFLH---ERGIIYR 120 (327)
T ss_pred cCCCCEeeEEEEEEe-----CCEEEEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecc
Confidence 469999999887433 56789999999999998887644 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||+++.... ...|+..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 121 Dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~ 200 (327)
T cd05617 121 DLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIIT 200 (327)
T ss_pred CCCHHHEEEeCCCCEEEeccccceeccCCCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccC
Confidence 9999999999999999999999975321 1268899999999999999999999999999999999999996432
Q ss_pred CCC-ccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 333 TGN-LTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 333 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
... .............. . ...+...+..+.+++.+||+.||++|+++
T Consensus 201 ~~~~~~~~~~~~~~~~~~-------~---------------------~~~p~~~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 201 DNPDMNTEDYLFQVILEK-------P---------------------IRIPRFLSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred CCcccccHHHHHHHHHhC-------C---------------------CCCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence 211 11111111100000 0 00111234557899999999999999985
No 151
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.98 E-value=9e-33 Score=254.93 Aligned_cols=195 Identities=29% Similarity=0.463 Sum_probs=154.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+. ....++||||+++|+|.+++..... ..+++..+..++.|++.||+|+| +.+++||
T Consensus 58 l~~~~i~~~~~~~~------~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~ 126 (262)
T cd05071 58 LRHEKLVQLYAVVS------EEPIYIVTEYMSKGSLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 126 (262)
T ss_pred CCCCCcceEEEEEC------CCCcEEEEEcCCCCcHHHHHhhccc--cCCCHHHHHHHHHHHHHHHHHHH---HCCcccc
Confidence 57999999987642 2356899999999999999975322 35789999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC-------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT-------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~-------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~ 330 (427)
||||+||+++.++.+||+|||.++...... .++..|+|||+.....++.++|||||||++||+++ |..||..
T Consensus 127 dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~ 206 (262)
T cd05071 127 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 206 (262)
T ss_pred ccCcccEEEcCCCcEEeccCCceeeccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCC
Confidence 999999999999999999999998654322 34567999999988889999999999999999999 8888865
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
.... +........ . +...+..++..+.+++.+||+.||++|||++++
T Consensus 207 ~~~~-----~~~~~~~~~-----~-----------------------~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~ 253 (262)
T cd05071 207 MVNR-----EVLDQVERG-----Y-----------------------RMPCPPECPESLHDLMCQCWRKEPEERPTFEYL 253 (262)
T ss_pred CChH-----HHHHHHhcC-----C-----------------------CCCCccccCHHHHHHHHHHccCCcccCCCHHHH
Confidence 3111 111100000 0 000123356678999999999999999999999
Q ss_pred HHHHHHH
Q 042634 411 AAQLLSF 417 (427)
Q Consensus 411 ~~~L~~~ 417 (427)
++.|+..
T Consensus 254 ~~~l~~~ 260 (262)
T cd05071 254 QAFLEDY 260 (262)
T ss_pred HHHHHHh
Confidence 9999875
No 152
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.98 E-value=6e-33 Score=255.48 Aligned_cols=191 Identities=23% Similarity=0.329 Sum_probs=148.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. +...++||||+++|+|.+++.... ..+++..++.++.||+.||+||| +.||+||
T Consensus 56 ~~h~~iv~~~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~ 124 (258)
T cd05078 56 LSHKHLVLNYGVCVC-----GDESIMVQEYVKFGSLDTYLKKNK---NLINISWKLEVAKQLAWALHFLE---DKGLTHG 124 (258)
T ss_pred CCCCChhheeeEEEe-----CCCcEEEEecCCCCcHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecC
Confidence 579999999998543 456899999999999999987653 34889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCc--------eEecccccccccCCc--CCCccccccccccCC-CCcCccccchhHHHHHHHHHhCC-C
Q 042634 259 DLKPSNVLLDGELT--------AHVGDFGLAKFLPEA--TNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGK-R 326 (427)
Q Consensus 259 Dlkp~NIll~~~~~--------~kL~DFG~a~~~~~~--~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~-~ 326 (427)
||||+||+++.++. +|++|||.+...... ..++..|+|||++.+ ..++.++|||||||++||+++|. .
T Consensus 125 dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~ 204 (258)
T cd05078 125 NVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDK 204 (258)
T ss_pred CCccceEEEecccccccCCCceEEecccccccccCCchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCC
Confidence 99999999977654 699999998765443 267788999999876 45799999999999999999985 5
Q ss_pred CCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC
Q 042634 327 PTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN 406 (427)
Q Consensus 327 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt 406 (427)
||..... .......... . . .+.....++.+++.+||+.||++|||
T Consensus 205 ~~~~~~~--~~~~~~~~~~--~---~----------------------------~~~~~~~~~~~li~~~l~~~p~~Rps 249 (258)
T cd05078 205 PLSALDS--QKKLQFYEDR--H---Q----------------------------LPAPKWTELANLINQCMDYEPDFRPS 249 (258)
T ss_pred ChhhccH--HHHHHHHHcc--c---c----------------------------CCCCCcHHHHHHHHHHhccChhhCCC
Confidence 5543210 0000000000 0 0 01112345889999999999999999
Q ss_pred HHHHHHHHH
Q 042634 407 MEEVAAQLL 415 (427)
Q Consensus 407 ~~ev~~~L~ 415 (427)
++|+++.|+
T Consensus 250 ~~~il~~l~ 258 (258)
T cd05078 250 FRAIIRDLN 258 (258)
T ss_pred HHHHHHhcC
Confidence 999999863
No 153
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.98 E-value=6.1e-33 Score=256.84 Aligned_cols=195 Identities=22% Similarity=0.414 Sum_probs=154.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++.+.+.. ....++||||+++++|.+++.... ..+++.++..++.|++.|++||| +.|++||
T Consensus 63 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~ 131 (268)
T cd05063 63 FSHHNIIRLEGVVTK-----FKPAMIITEYMENGALDKYLRDHD---GEFSSYQLVGMLRGIAAGMKYLS---DMNYVHR 131 (268)
T ss_pred CCCCCeeEEEEEEcc-----CCCcEEEEEcCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecc
Confidence 469999999988543 456899999999999999986532 35889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC---------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT---------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPT 328 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~---------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf 328 (427)
||||+||+++.++.+||+|||++....... ..+..|+|||++....++.++|||||||++||+++ |+.||
T Consensus 132 dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~ 211 (268)
T cd05063 132 DLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPY 211 (268)
T ss_pred ccchhhEEEcCCCcEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCC
Confidence 999999999999999999999998654322 12346999999988889999999999999999997 99998
Q ss_pred CcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 329 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
..... ..+...+..... ...+..++.++.+++.+||+.+|++||++.
T Consensus 212 ~~~~~--~~~~~~i~~~~~-------------------------------~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~ 258 (268)
T cd05063 212 WDMSN--HEVMKAINDGFR-------------------------------LPAPMDCPSAVYQLMLQCWQQDRARRPRFV 258 (268)
T ss_pred CcCCH--HHHHHHHhcCCC-------------------------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHH
Confidence 64321 111111110000 001122456789999999999999999999
Q ss_pred HHHHHHHHH
Q 042634 409 EVAAQLLSF 417 (427)
Q Consensus 409 ev~~~L~~~ 417 (427)
+|++.|+++
T Consensus 259 ~i~~~l~~~ 267 (268)
T cd05063 259 DIVNLLDKL 267 (268)
T ss_pred HHHHHHHhh
Confidence 999999875
No 154
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.98 E-value=2.3e-33 Score=266.63 Aligned_cols=184 Identities=24% Similarity=0.248 Sum_probs=146.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++|+|..++... ..+++..+..++.||+.||+||| +.||+||
T Consensus 53 ~~h~~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~L~~lH---~~~ivH~ 120 (321)
T cd05603 53 LKHPFLVGLHYSFQT-----AEKLYFVLDYVNGGELFFHLQRE----RCFLEPRARFYAAEVASAIGYLH---SLNIIYR 120 (321)
T ss_pred CCCCCccceeeEEEc-----CCEEEEEEcCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEec
Confidence 579999999887433 56789999999999998877543 45888999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||+++.... ...|+..|+|||++.+..++.++|||||||++|||++|..||....
T Consensus 121 Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 200 (321)
T cd05603 121 DLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD 200 (321)
T ss_pred cCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC
Confidence 9999999999999999999999875322 1257889999999999899999999999999999999999997531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
............ . ..+...+.++.+++.+|++.||.+||++.
T Consensus 201 -----~~~~~~~i~~~~--------~---------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 201 -----VSQMYDNILHKP--------L---------------------QLPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred -----HHHHHHHHhcCC--------C---------------------CCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 111111111000 0 01112345688999999999999999864
No 155
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.98 E-value=1.6e-33 Score=268.25 Aligned_cols=187 Identities=24% Similarity=0.246 Sum_probs=148.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++|+|..++... ..+++..+..++.||+.||+||| +.||+||
T Consensus 53 ~~hp~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~al~~lH---~~givH~ 120 (325)
T cd05604 53 VKHPFLVGLHYSFQT-----TEKLYFVLDFVNGGELFFHLQRE----RSFPEPRARFYAAEIASALGYLH---SINIVYR 120 (325)
T ss_pred CCCCCCccEEEEEec-----CCEEEEEEcCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeec
Confidence 579999999887533 56789999999999998887654 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+|||++.++.+||+|||+++.... ...|+..|+|||++.+..++.++|||||||++|||++|..||....
T Consensus 121 Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~ 200 (325)
T cd05604 121 DLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRD 200 (325)
T ss_pred CCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCC
Confidence 9999999999999999999999875322 1258889999999999999999999999999999999999997531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
..+......... .. .....+.++.+++.+|++.+|++||++.+.+
T Consensus 201 -----~~~~~~~~~~~~--------~~---------------------~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~ 245 (325)
T cd05604 201 -----VAEMYDNILHKP--------LV---------------------LRPGASLTAWSILEELLEKDRQRRLGAKEDF 245 (325)
T ss_pred -----HHHHHHHHHcCC--------cc---------------------CCCCCCHHHHHHHHHHhccCHHhcCCCCCCH
Confidence 111111111100 00 0011345578899999999999999886433
No 156
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.98 E-value=1.6e-32 Score=253.01 Aligned_cols=194 Identities=27% Similarity=0.442 Sum_probs=153.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+. ....+++|||+++++|.+++..... ..+++..+..++.|++.||+||| +.|++||
T Consensus 58 l~h~~i~~~~~~~~------~~~~~~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~ 126 (260)
T cd05069 58 LRHDKLVPLYAVVS------EEPIYIVTEFMGKGSLLDFLKEGDG--KYLKLPQLVDMAAQIADGMAYIE---RMNYIHR 126 (260)
T ss_pred CCCCCeeeEEEEEc------CCCcEEEEEcCCCCCHHHHHhhCCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCEeec
Confidence 57999999887642 2357899999999999999865432 34788999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC-------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT-------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~-------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~ 330 (427)
||||+||++++++.+||+|||.++...... .++..|+|||...+..++.++|||||||++||+++ |..||.+
T Consensus 127 dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 206 (260)
T cd05069 127 DLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPG 206 (260)
T ss_pred ccCcceEEEcCCCeEEECCCccceEccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999999999999999999999998653322 34567999999988889999999999999999999 8999875
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
.... ............ ..+...+..+.+++.+||+.||++|||+++|
T Consensus 207 ~~~~--~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i 253 (260)
T cd05069 207 MVNR--EVLEQVERGYRM-------------------------------PCPQGCPESLHELMKLCWKKDPDERPTFEYI 253 (260)
T ss_pred CCHH--HHHHHHHcCCCC-------------------------------CCCcccCHHHHHHHHHHccCCcccCcCHHHH
Confidence 3211 111111100000 0112345678999999999999999999999
Q ss_pred HHHHHH
Q 042634 411 AAQLLS 416 (427)
Q Consensus 411 ~~~L~~ 416 (427)
++.|++
T Consensus 254 ~~~l~~ 259 (260)
T cd05069 254 QSFLED 259 (260)
T ss_pred HHHHhc
Confidence 999875
No 157
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.98 E-value=8.3e-33 Score=257.29 Aligned_cols=196 Identities=27% Similarity=0.389 Sum_probs=152.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh---hhhccCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE---ALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~i 255 (427)
++|+||+++++.+.. ....++||||+++++|.+++..... ....+++..++.++.||+.|++||| +.++
T Consensus 66 l~~~~i~~~~~~~~~-----~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~i 137 (277)
T cd05036 66 FNHQNIVRLIGVSFE-----RLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE---ENHF 137 (277)
T ss_pred CCCCCEeeEEEEEcc-----CCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCE
Confidence 579999999987543 4567899999999999999865421 1135889999999999999999999 8999
Q ss_pred eeccccCCceeeCCCC---ceEecccccccccCCcC--------CCccccccccccCCCCcCccccchhHHHHHHHHHh-
Q 042634 256 VHCDLKPSNVLLDGEL---TAHVGDFGLAKFLPEAT--------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT- 323 (427)
Q Consensus 256 vHrDlkp~NIll~~~~---~~kL~DFG~a~~~~~~~--------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~- 323 (427)
+||||||+||+++.++ .+||+|||.++...... ..+..|+|||++.+..++.++|||||||++|||++
T Consensus 138 vH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~ 217 (277)
T cd05036 138 IHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSL 217 (277)
T ss_pred eecccchheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcC
Confidence 9999999999997654 69999999998653221 22457999999998899999999999999999997
Q ss_pred CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCC
Q 042634 324 GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRE 403 (427)
Q Consensus 324 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~ 403 (427)
|..||...... .+...+...... ..+..++.++.+++.+||+.+|++
T Consensus 218 g~~pf~~~~~~--~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~i~~cl~~~p~~ 264 (277)
T cd05036 218 GYMPYPGRTNQ--EVMEFVTGGGRL-------------------------------DPPKGCPGPVYRIMTDCWQHTPED 264 (277)
T ss_pred CCCCCCCCCHH--HHHHHHHcCCcC-------------------------------CCCCCCCHHHHHHHHHHcCCCccc
Confidence 99998753211 111111100000 011234567899999999999999
Q ss_pred CCCHHHHHHHHH
Q 042634 404 RMNMEEVAAQLL 415 (427)
Q Consensus 404 Rpt~~ev~~~L~ 415 (427)
|||+.||++.|+
T Consensus 265 Rps~~~vl~~l~ 276 (277)
T cd05036 265 RPNFATILERIQ 276 (277)
T ss_pred CcCHHHHHHHhh
Confidence 999999999886
No 158
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.98 E-value=9.4e-33 Score=257.82 Aligned_cols=208 Identities=28% Similarity=0.434 Sum_probs=155.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++.+.+... +....++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.||+||
T Consensus 62 l~h~~iv~~~~~~~~~---~~~~~~lv~e~~~~~~L~~~l~~~~---~~l~~~~~~~~~~~l~~aL~~LH---~~~i~H~ 132 (284)
T cd05081 62 LQHDNIVKYKGVCYSA---GRRNLRLVMEYLPYGSLRDYLQKHR---ERLDHRKLLLYASQICKGMEYLG---SKRYVHR 132 (284)
T ss_pred CCCCCeeEEEEEEccC---CCCceEEEEEecCCCCHHHHHHhcC---cCCCHHHHHHHHHHHHHHHHHHH---HCCceec
Confidence 5799999998875432 2345789999999999999986543 34889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC---------CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT---------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~---------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~ 329 (427)
||||+||+++.++.+||+|||+++...... .++..|+|||++.+..++.++|||||||++|||++|..++.
T Consensus 133 dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~ 212 (284)
T cd05081 133 DLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSC 212 (284)
T ss_pred cCCHhhEEECCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCC
Confidence 999999999999999999999998764322 23345999999988889999999999999999999887654
Q ss_pred cccCCCccHHHHHHHhcc-----cchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCC
Q 042634 330 EMFTGNLTLHNFVKEALP-----ERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRER 404 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~R 404 (427)
.... .+.+....... ..+.+.+.. ......+..++.++.+++.+||+.+|++|
T Consensus 213 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~li~~cl~~~p~~R 270 (284)
T cd05081 213 SPPA---EFMRMMGNDKQGQMIVYHLIELLKN-------------------NGRLPAPPGCPAEIYAIMKECWNNDPSQR 270 (284)
T ss_pred Ccch---hhhhhcccccccccchHHHHHHHhc-------------------CCcCCCCCCCCHHHHHHHHHHccCChhhC
Confidence 3210 00000000000 000000000 00000123346679999999999999999
Q ss_pred CCHHHHHHHHHHH
Q 042634 405 MNMEEVAAQLLSF 417 (427)
Q Consensus 405 pt~~ev~~~L~~~ 417 (427)
||+.||++.|+.+
T Consensus 271 pt~~ei~~~l~~~ 283 (284)
T cd05081 271 PSFSELALQVEAI 283 (284)
T ss_pred CCHHHHHHHHHhc
Confidence 9999999999876
No 159
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.98 E-value=1.3e-32 Score=256.99 Aligned_cols=211 Identities=27% Similarity=0.405 Sum_probs=154.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++.+.+... +....++||||+++++|.+++.... ..+++..+..++.|++.||+||| ++||+||
T Consensus 63 l~h~~i~~~~~~~~~~---~~~~~~lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~i~~~i~~aL~~lH---~~gi~H~ 133 (284)
T cd05079 63 LYHENIVKYKGICTED---GGNGIKLIMEFLPSGSLKEYLPRNK---NKINLKQQLKYAVQICKGMDYLG---SRQYVHR 133 (284)
T ss_pred CCCCCeeeeeeEEecC---CCCceEEEEEccCCCCHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeec
Confidence 5799999998876441 1345789999999999999986432 34889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc---------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA---------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~---------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~ 329 (427)
||||+||+++.++.+||+|||+++..... ..++..|+|||++.+..++.++|||||||++||+++++.|+.
T Consensus 134 dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~ 213 (284)
T cd05079 134 DLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSES 213 (284)
T ss_pred ccchheEEEcCCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCc
Confidence 99999999999999999999999865432 245567999999988889999999999999999999877643
Q ss_pred cccCCCccHHHHHHHhc-ccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 330 EMFTGNLTLHNFVKEAL-PERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
..... ......... .......+.. .........+..++.++.+++.+||+.+|++|||++
T Consensus 214 ~~~~~---~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~ 274 (284)
T cd05079 214 SPMTL---FLKMIGPTHGQMTVTRLVRV----------------LEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQ 274 (284)
T ss_pred cccch---hhhhcccccccccHHHHHHH----------------HHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHH
Confidence 21100 000000000 0000000000 000000001223567799999999999999999999
Q ss_pred HHHHHHHHH
Q 042634 409 EVAAQLLSF 417 (427)
Q Consensus 409 ev~~~L~~~ 417 (427)
|+++.++++
T Consensus 275 ~il~~l~~~ 283 (284)
T cd05079 275 NLIEGFEAI 283 (284)
T ss_pred HHHHHHHhh
Confidence 999999876
No 160
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.98 E-value=1.4e-32 Score=254.68 Aligned_cols=200 Identities=24% Similarity=0.336 Sum_probs=147.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh-hhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE-ALKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
++||||+++++.+.. ....++||||+++|+|.+++..... .....++..++.++.|++.|++||| +.|++|
T Consensus 52 l~h~~iv~~~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H 123 (269)
T cd05087 52 LQHSNLLQCLGQCTE-----VTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH---KNNFIH 123 (269)
T ss_pred CCCCCEeeEEEEEcC-----CCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCEec
Confidence 579999999987544 4567999999999999999865322 1124567788899999999999999 899999
Q ss_pred ccccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCCC-------CcCccccchhHHHHHHHHH
Q 042634 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGS-------EVSTSGDVYSFGILLLETF 322 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~-------~~~~~~DiwS~G~vl~ell 322 (427)
|||||+||+++.++.+||+|||.++..... ..++..|+|||++... .++.++|||||||++|||+
T Consensus 124 ~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~ 203 (269)
T cd05087 124 SDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELF 203 (269)
T ss_pred cccCcceEEEcCCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHH
Confidence 999999999999999999999999754322 2456779999998542 3578999999999999999
Q ss_pred h-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCC
Q 042634 323 T-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELP 401 (427)
Q Consensus 323 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP 401 (427)
+ |+.||....... . .............++. .....+..+.+++.+|| .+|
T Consensus 204 ~~g~~p~~~~~~~~--~---~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~l~~~c~-~~P 254 (269)
T cd05087 204 ELGSQPYRHLSDEQ--V---LTYTVREQQLKLPKPR-----------------------LKLPLSDRWYEVMQFCW-LQP 254 (269)
T ss_pred hCCCCCCCCCChHH--H---HHHHhhcccCCCCCCc-----------------------cCCCCChHHHHHHHHHh-cCc
Confidence 6 999996532111 1 0000000000011100 01113445788999999 589
Q ss_pred CCCCCHHHHHHHHH
Q 042634 402 RERMNMEEVAAQLL 415 (427)
Q Consensus 402 ~~Rpt~~ev~~~L~ 415 (427)
++|||++||++.|+
T Consensus 255 ~~Rpt~~~l~~~l~ 268 (269)
T cd05087 255 EQRPSAEEVHLLLS 268 (269)
T ss_pred ccCCCHHHHHHHhc
Confidence 99999999998874
No 161
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.98 E-value=1.5e-32 Score=263.32 Aligned_cols=202 Identities=23% Similarity=0.344 Sum_probs=154.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh-----------------------------------
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE----------------------------------- 223 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~----------------------------------- 223 (427)
.+||||+++++.+.. .+...+++|||+++|+|.+++.....
T Consensus 68 ~~h~niv~~~~~~~~----~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (343)
T cd05103 68 GHHLNVVNLLGACTK----PGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITS 143 (343)
T ss_pred cCCccHhhhcceeec----CCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhcccccc
Confidence 368999999987643 23457899999999999988754210
Q ss_pred ----------------------------hhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccccCCceeeCCCCceEe
Q 042634 224 ----------------------------ALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHV 275 (427)
Q Consensus 224 ----------------------------~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 275 (427)
....+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~~~~~~kl 220 (343)
T cd05103 144 SQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSENNVVKI 220 (343)
T ss_pred ccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCccCeEEEcCCCcEEE
Confidence 0124788889999999999999999 899999999999999999999999
Q ss_pred cccccccccCCc--------CCCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhc
Q 042634 276 GDFGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLTLHNFVKEAL 346 (427)
Q Consensus 276 ~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~~~~~~~~~~~~~~~~~ 346 (427)
+|||+++..... ..++..|+|||.+.+..++.++|||||||++||+++ |..||....... .+...+....
T Consensus 221 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~~~~~~~~~~ 299 (343)
T cd05103 221 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGT 299 (343)
T ss_pred EecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH-HHHHHHhccC
Confidence 999999864322 134567999999988899999999999999999997 999986532111 1111110000
Q ss_pred ccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHH
Q 042634 347 PERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQLLSFRN 419 (427)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~L~~~~~ 419 (427)
.. ..+...+.++.+++.+||+.||++|||+.||++.|+.+.+
T Consensus 300 ~~-------------------------------~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 300 RM-------------------------------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred CC-------------------------------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 00 0011123468899999999999999999999999998865
No 162
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.98 E-value=5.7e-33 Score=263.55 Aligned_cols=146 Identities=19% Similarity=0.334 Sum_probs=119.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh-----hhhccCHHHHHHHHHHHHHHHHHHhhcCCC
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE-----ALKNLNLLQRLSIAVDVASALDYLHHYCET 253 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-----~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~ 253 (427)
++||||+++++.+.. ..+...+++|||+ +++|.+++..... ....+++..++.++.|++.||+||| +.
T Consensus 55 l~h~niv~~~~~~~~---~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~ 127 (317)
T cd07868 55 LKHPNVISLQKVFLS---HADRKVWLLFDYA-EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---AN 127 (317)
T ss_pred cCCCCCcceeeeEec---CCCcEEEEEEecc-CCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHH---hC
Confidence 469999999887543 1234678999998 5688777643211 1135889999999999999999999 89
Q ss_pred CeeeccccCCceee----CCCCceEecccccccccCCc---------CCCccccccccccCC-CCcCccccchhHHHHHH
Q 042634 254 PIVHCDLKPSNVLL----DGELTAHVGDFGLAKFLPEA---------TNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLL 319 (427)
Q Consensus 254 ~ivHrDlkp~NIll----~~~~~~kL~DFG~a~~~~~~---------~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ 319 (427)
||+||||||+|||+ +.++.+||+|||+|+..... ..+|..|+|||++.+ ..++.++||||+||++|
T Consensus 128 ~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ 207 (317)
T cd07868 128 WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFA 207 (317)
T ss_pred CEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHH
Confidence 99999999999999 45678999999999865322 266888999999877 45899999999999999
Q ss_pred HHHhCCCCCCcc
Q 042634 320 ETFTGKRPTNEM 331 (427)
Q Consensus 320 ell~g~~pf~~~ 331 (427)
||++|++||...
T Consensus 208 el~~g~~~f~~~ 219 (317)
T cd07868 208 ELLTSEPIFHCR 219 (317)
T ss_pred HHHhCCCCccCC
Confidence 999999999753
No 163
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.98 E-value=1.2e-32 Score=259.51 Aligned_cols=197 Identities=25% Similarity=0.412 Sum_probs=156.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ...++++||+++|+|.+++.... ..+++..+..++.|++.||+||| ++||+||
T Consensus 66 l~h~niv~~~~~~~~------~~~~~v~e~~~~g~l~~~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~ 133 (303)
T cd05110 66 MDHPHLVRLLGVCLS------PTIQLVTQLMPHGCLLDYVHEHK---DNIGSQLLLNWCVQIAKGMMYLE---ERRLVHR 133 (303)
T ss_pred CCCCCcccEEEEEcC------CCceeeehhcCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHh---hcCeecc
Confidence 579999999998643 23578999999999999886543 35888999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC--------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT--------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~--------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~ 329 (427)
||||+||+++.++.+||+|||+++...... .++..|+|||++.+..++.++|||||||++||+++ |..||.
T Consensus 134 dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~ 213 (303)
T cd05110 134 DLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 213 (303)
T ss_pred ccccceeeecCCCceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999999998654321 34568999999998899999999999999999997 889986
Q ss_pred cccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 330 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
+... ....+.+..... . ..+..++..+.+++.+||..+|++|||++|
T Consensus 214 ~~~~--~~~~~~~~~~~~------~-------------------------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~ 260 (303)
T cd05110 214 GIPT--REIPDLLEKGER------L-------------------------PQPPICTIDVYMVMVKCWMIDADSRPKFKE 260 (303)
T ss_pred CCCH--HHHHHHHHCCCC------C-------------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 5311 111111111000 0 011123456889999999999999999999
Q ss_pred HHHHHHHHHHH
Q 042634 410 VAAQLLSFRNK 420 (427)
Q Consensus 410 v~~~L~~~~~~ 420 (427)
+++.|+++.+.
T Consensus 261 l~~~l~~~~~~ 271 (303)
T cd05110 261 LAAEFSRMARD 271 (303)
T ss_pred HHHHHHHHHhc
Confidence 99999998654
No 164
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.98 E-value=1.6e-32 Score=252.99 Aligned_cols=194 Identities=26% Similarity=0.460 Sum_probs=153.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||+++++++.+. ....+++|||+++++|.+++..... ..+++.++..++.|++.||+||| +.|++||
T Consensus 58 l~~~~i~~~~~~~~------~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~ 126 (260)
T cd05070 58 LRHDKLVQLYAVVS------EEPIYIVTEYMSKGSLLDFLKDGEG--RALKLPNLVDMAAQVAAGMAYIE---RMNYIHR 126 (260)
T ss_pred cCCCceEEEEeEEC------CCCcEEEEEecCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHH---HCCcccC
Confidence 57999999987642 2357899999999999999865422 45889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC-------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT-------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~-------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~ 330 (427)
||||+||++++++.+||+|||.+....... .++..|+|||+..+..++.++||||||+++||+++ |..||.+
T Consensus 127 di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~ 206 (260)
T cd05070 127 DLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPG 206 (260)
T ss_pred CCccceEEEeCCceEEeCCceeeeeccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCC
Confidence 999999999999999999999998654322 34457999999988889999999999999999999 8999865
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
.... ..........+. ..+...+..+.+++.+||+.+|++|||++++
T Consensus 207 ~~~~--~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l 253 (260)
T cd05070 207 MNNR--EVLEQVERGYRM-------------------------------PCPQDCPISLHELMLQCWKKDPEERPTFEYL 253 (260)
T ss_pred CCHH--HHHHHHHcCCCC-------------------------------CCCCcCCHHHHHHHHHHcccCcccCcCHHHH
Confidence 3211 111111100000 0112245668999999999999999999999
Q ss_pred HHHHHH
Q 042634 411 AAQLLS 416 (427)
Q Consensus 411 ~~~L~~ 416 (427)
.+.|++
T Consensus 254 ~~~l~~ 259 (260)
T cd05070 254 QSFLED 259 (260)
T ss_pred HHHHhc
Confidence 998875
No 165
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.98 E-value=9.6e-33 Score=257.97 Aligned_cols=195 Identities=24% Similarity=0.289 Sum_probs=152.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. +...++||||+++|+|.+++..... ..+++..+..++.|++.||+||| +.||+||
T Consensus 57 l~h~~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~ 126 (285)
T cd05605 57 VNSRFVVSLAYAYET-----KDALCLVLTLMNGGDLKFHIYNMGN--PGFDEERAVFYAAEITCGLEDLH---RERIVYR 126 (285)
T ss_pred cCCCCEeeeeeeecC-----CCeEEEEEeccCCCcHHHHHHhcCc--CCCCHHHHHHHHHHHHHHHHHHH---HCCcEec
Confidence 469999999887543 5678999999999999988754321 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
||||+||++++++.+||+|||+++..... ..|+..|+|||++.+..++.++||||+||++||+++|+.||.+...
T Consensus 127 dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~ 206 (285)
T cd05605 127 DLKPENILLDDYGHIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKE 206 (285)
T ss_pred CCCHHHEEECCCCCEEEeeCCCceecCCCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCch
Confidence 99999999999999999999999875432 2678899999999988999999999999999999999999975311
Q ss_pred CCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC-----CHH
Q 042634 334 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM-----NME 408 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp-----t~~ 408 (427)
. ..... +...... .. ...+...+..+.+++.+||+.||++|| +++
T Consensus 207 ~-~~~~~-~~~~~~~----~~------------------------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~ 256 (285)
T cd05605 207 K-VKREE-VERRVKE----DQ------------------------EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAE 256 (285)
T ss_pred h-hHHHH-HHHHhhh----cc------------------------cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHH
Confidence 1 11111 1110000 00 001122456688999999999999999 888
Q ss_pred HHHHH
Q 042634 409 EVAAQ 413 (427)
Q Consensus 409 ev~~~ 413 (427)
+++++
T Consensus 257 ~l~~~ 261 (285)
T cd05605 257 EVKAH 261 (285)
T ss_pred HHhcC
Confidence 88664
No 166
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.98 E-value=4.4e-33 Score=267.99 Aligned_cols=192 Identities=22% Similarity=0.278 Sum_probs=152.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+. .+...++||||+++++|.+++... ..+++..++.++.|++.||+||| ..||+||
T Consensus 58 ~~~~~i~~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH---~~giiH~ 125 (350)
T cd05573 58 ADSPWIVKLYYSFQ-----DEEHLYLVMEYMPGGDLMNLLIRK----DVFPEETARFYIAELVLALDSVH---KLGFIHR 125 (350)
T ss_pred cCCCCccchhhhee-----cCCeEEEEEcCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecc
Confidence 45999999998743 366789999999999999998755 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-----------------------------------CCCccccccccccCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-----------------------------------TNNFFNFQIAEYGMGS 303 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-----------------------------------~~~~~~y~aPE~~~~~ 303 (427)
||||+||+++.++.+||+|||+++..... ..||..|+|||++.+.
T Consensus 126 Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 205 (350)
T cd05573 126 DIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGT 205 (350)
T ss_pred CCCHHHeEECCCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCC
Confidence 99999999999999999999999865322 2588899999999999
Q ss_pred CcCccccchhHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchH
Q 042634 304 EVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVK 383 (427)
Q Consensus 304 ~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (427)
.++.++|||||||++|||++|+.||..... ......... .. ..... . ...
T Consensus 206 ~~~~~~DiwSlG~il~ell~g~~Pf~~~~~-----~~~~~~i~~-----~~-~~~~~----------------p---~~~ 255 (350)
T cd05573 206 PYGLECDWWSLGVILYEMLYGFPPFYSDTL-----QETYNKIIN-----WK-ESLRF----------------P---PDP 255 (350)
T ss_pred CCCCceeeEecchhhhhhccCCCCCCCCCH-----HHHHHHHhc-----cC-CcccC----------------C---CCC
Confidence 999999999999999999999999975321 111111000 00 00000 0 001
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCC-HHHHHHH
Q 042634 384 ECLVSVLGIGVTCSSELPRERMN-MEEVAAQ 413 (427)
Q Consensus 384 ~~~~~~~~l~~~cl~~dP~~Rpt-~~ev~~~ 413 (427)
..+.++.+++.+|+. ||.+||+ ++|++++
T Consensus 256 ~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 256 PVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred CCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 135668899999998 9999999 9999875
No 167
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.98 E-value=7.5e-33 Score=268.54 Aligned_cols=222 Identities=17% Similarity=0.208 Sum_probs=151.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+...........++||||+. ++|.+++... ..+++..++.++.|++.||+||| +.||+||
T Consensus 56 l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~ 127 (372)
T cd07853 56 FKHDNVLSALDILQPPHIDPFEEIYVVTELMQ-SDLHKIIVSP----QPLSSDHVKVFLYQILRGLKYLH---SAGILHR 127 (372)
T ss_pred CCCCCcCCHhheecCCCccccceEEEEeeccc-cCHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCC
Confidence 57999999999865533222236799999994 6887777544 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-------CCCccccccccccCCC-CcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-------TNNFFNFQIAEYGMGS-EVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-------~~~~~~y~aPE~~~~~-~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
||||+|||++.++.+||+|||+|+..... ..++..|+|||++.+. .++.++||||+||++|||++|+.||.+
T Consensus 128 dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 207 (372)
T cd07853 128 DIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQA 207 (372)
T ss_pred CCChHHEEECCCCCEEeccccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCC
Confidence 99999999999999999999999865322 2567789999998874 479999999999999999999999975
Q ss_pred ccCCCccHHHHHHHhcc-cchhcccCccccccccccchhhhccccccc--cccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 331 MFTGNLTLHNFVKEALP-ERLAEIVDPVLLVEREEGETSKANAHKQFT--RSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
.... ..+ ..+..... +...+..... .. ............+.. ........+.++.+++.+||+.||++|||+
T Consensus 208 ~~~~-~~~-~~i~~~~g~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~ 282 (372)
T cd07853 208 QSPI-QQL-DLITDLLGTPSLEAMRSAC-EG--ARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISA 282 (372)
T ss_pred CCHH-HHH-HHHHHHcCCCCHHHHHHhh-HH--HHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCH
Confidence 3211 111 11111110 0000000000 00 000000000000000 000112235678999999999999999999
Q ss_pred HHHHHH
Q 042634 408 EEVAAQ 413 (427)
Q Consensus 408 ~ev~~~ 413 (427)
+|++++
T Consensus 283 ~e~l~h 288 (372)
T cd07853 283 ADALAH 288 (372)
T ss_pred HHHhcC
Confidence 999874
No 168
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.98 E-value=5.7e-33 Score=264.30 Aligned_cols=182 Identities=21% Similarity=0.252 Sum_probs=142.9
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecc
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrD 259 (427)
+|++|+++++.+. .....++||||+++|+|.+++... ..+++..+..++.|++.||+||| +.||+|||
T Consensus 59 ~~~~i~~~~~~~~-----~~~~~~lv~E~~~~g~L~~~~~~~----~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~d 126 (324)
T cd05587 59 KPPFLTQLHSCFQ-----TMDRLYFVMEYVNGGDLMYHIQQV----GKFKEPHAVFYAAEIAIGLFFLH---SKGIIYRD 126 (324)
T ss_pred CCCceeeeEEEEE-----cCCEEEEEEcCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecC
Confidence 3456777776643 356789999999999999888654 34889999999999999999999 89999999
Q ss_pred ccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 260 LKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 260 lkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
|||+|||++.++.+||+|||+++.... ...|+..|+|||++.+..++.++||||+||++|||++|+.||.+...
T Consensus 127 lkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~ 206 (324)
T cd05587 127 LKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE 206 (324)
T ss_pred CCHHHeEEcCCCCEEEeecCcceecCCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH
Confidence 999999999999999999999875321 12688999999999999999999999999999999999999975311
Q ss_pred CCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 334 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
........... . . .+...+.++.+++.+||+.||.+|++.
T Consensus 207 -----~~~~~~i~~~~--------~----------------~-----~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 207 -----DELFQSIMEHN--------V----------------S-----YPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred -----HHHHHHHHcCC--------C----------------C-----CCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 11111110000 0 0 011234567899999999999999986
No 169
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.98 E-value=1.9e-32 Score=253.44 Aligned_cols=195 Identities=24% Similarity=0.430 Sum_probs=155.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. +...++||||+++++|.+++.... ..+++.++..++.|++.|++||| +.|++||
T Consensus 62 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH---~~~i~h~ 130 (267)
T cd05066 62 FDHPNIIHLEGVVTK-----SKPVMIVTEYMENGSLDAFLRKHD---GQFTVIQLVGMLRGIASGMKYLS---DMGYVHR 130 (267)
T ss_pred CCCCCcceEEEEEec-----CCccEEEEEcCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCEeeh
Confidence 479999999987533 567899999999999999986543 34889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC---------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT---------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPT 328 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~---------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf 328 (427)
||||+||+++.++.+||+|||.++...... .++..|+|||++.+..++.++|||||||++||+++ |..||
T Consensus 131 dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~ 210 (267)
T cd05066 131 DLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 210 (267)
T ss_pred hhchhcEEECCCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCc
Confidence 999999999999999999999998654321 22457999999998889999999999999999886 99998
Q ss_pred CcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 329 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
...... .....+...... ..+..++..+.+++.+||+.+|++|||+.
T Consensus 211 ~~~~~~--~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ 257 (267)
T cd05066 211 WEMSNQ--DVIKAIEEGYRL-------------------------------PAPMDCPAALHQLMLDCWQKDRNERPKFE 257 (267)
T ss_pred ccCCHH--HHHHHHhCCCcC-------------------------------CCCCCCCHHHHHHHHHHcccCchhCCCHH
Confidence 653211 111111100000 01122456688999999999999999999
Q ss_pred HHHHHHHHH
Q 042634 409 EVAAQLLSF 417 (427)
Q Consensus 409 ev~~~L~~~ 417 (427)
++++.|+++
T Consensus 258 ~i~~~l~~~ 266 (267)
T cd05066 258 QIVSILDKL 266 (267)
T ss_pred HHHHHHHhh
Confidence 999999875
No 170
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.98 E-value=1.7e-32 Score=253.96 Aligned_cols=200 Identities=24% Similarity=0.324 Sum_probs=148.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhh-hhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREA-LKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
++||||+++++.+.. ....++||||+++|+|.+++...... ....++..++.++.|++.||+||| +.||+|
T Consensus 52 l~h~nii~~~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH 123 (269)
T cd05042 52 LNHPNVLQCLGQCIE-----SIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLH---QADFIH 123 (269)
T ss_pred CCCCCcceEEEEECC-----CCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHH---hcCEec
Confidence 579999999998644 45689999999999999998654321 123567788999999999999999 899999
Q ss_pred ccccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCC-------CCcCccccchhHHHHHHHHH
Q 042634 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMG-------SEVSTSGDVYSFGILLLETF 322 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~-------~~~~~~~DiwS~G~vl~ell 322 (427)
|||||+||++++++.+||+|||+++..... ..++..|+|||++.. ..++.++|||||||++|||+
T Consensus 124 ~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~ 203 (269)
T cd05042 124 SDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELF 203 (269)
T ss_pred ccccHhheEecCCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHH
Confidence 999999999999999999999998754221 134567999998743 35688999999999999999
Q ss_pred h-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCC
Q 042634 323 T-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELP 401 (427)
Q Consensus 323 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP 401 (427)
+ |..||...... ..+........ .....+ ..+..++..+.+++..|| .||
T Consensus 204 ~~~~~p~~~~~~~-~~~~~~~~~~~----~~~~~~-----------------------~~~~~~~~~~~~~~~~~~-~dp 254 (269)
T cd05042 204 TAADQPYPDLSDE-QVLKQVVREQD----IKLPKP-----------------------QLDLKYSDRWYEVMQFCW-LDP 254 (269)
T ss_pred hCCCCCCCcCCHH-HHHHHHhhccC----ccCCCC-----------------------cccccCCHHHHHHHHHHh-cCc
Confidence 9 78888653211 11111111100 000000 012234556778999999 599
Q ss_pred CCCCCHHHHHHHHH
Q 042634 402 RERMNMEEVAAQLL 415 (427)
Q Consensus 402 ~~Rpt~~ev~~~L~ 415 (427)
++|||++||++.|.
T Consensus 255 ~~Rpt~~~v~~~l~ 268 (269)
T cd05042 255 ETRPTAEEVHELLT 268 (269)
T ss_pred ccccCHHHHHHHhc
Confidence 99999999998873
No 171
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.98 E-value=8.7e-33 Score=254.94 Aligned_cols=191 Identities=22% Similarity=0.282 Sum_probs=152.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. +...++|+||+++++|.+++... ..+++..+..++.|++.||.||| +.||+||
T Consensus 61 l~~~~i~~~~~~~~~-----~~~~~~v~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~ 128 (263)
T cd06625 61 LQHERIVQYYGCLRD-----DETLSIFMEYMPGGSVKDQLKAY----GALTETVTRKYTRQILEGVEYLH---SNMIVHR 128 (263)
T ss_pred CCCCCeeeeEEEEcc-----CCeEEEEEEECCCCcHHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecC
Confidence 569999999998543 55889999999999999988654 34888999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc---------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA---------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~---------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~ 329 (427)
||||+||+++.++.+||+|||.++..... ..++..|+|||++.+..++.++||||+||++||+++|+.||.
T Consensus 129 dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 208 (263)
T cd06625 129 DIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWA 208 (263)
T ss_pred CCCHHHEEEcCCCCEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCcc
Confidence 99999999999999999999999765321 245678999999999889999999999999999999999986
Q ss_pred cccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 330 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
.... ............ ....+..++..+.+++.+||..+|++|||++|
T Consensus 209 ~~~~----~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ 256 (263)
T cd06625 209 EFEA----MAAIFKIATQPT----------------------------NPQLPSHVSPDARNFLRRTFVENAKKRPSAEE 256 (263)
T ss_pred ccch----HHHHHHHhccCC----------------------------CCCCCccCCHHHHHHHHHHhhcCcccCCCHHH
Confidence 4311 111100000000 00012234567899999999999999999999
Q ss_pred HHHH
Q 042634 410 VAAQ 413 (427)
Q Consensus 410 v~~~ 413 (427)
+++.
T Consensus 257 ll~~ 260 (263)
T cd06625 257 LLRH 260 (263)
T ss_pred HhhC
Confidence 9864
No 172
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.98 E-value=7.1e-33 Score=268.09 Aligned_cols=192 Identities=18% Similarity=0.227 Sum_probs=149.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+. .+...++||||+++|+|.+++... .+++..+..++.|++.||+||| +.||+||
T Consensus 100 ~~h~~iv~~~~~~~-----~~~~~~lv~Ey~~gg~L~~~l~~~-----~l~~~~~~~~~~qi~~aL~~LH---~~~ivHr 166 (370)
T cd05596 100 ANSEWIVQLHYAFQ-----DDKYLYMVMEYMPGGDLVNLMSNY-----DIPEKWARFYTAEVVLALDAIH---SMGFIHR 166 (370)
T ss_pred CCCCCcceEEEEEe-----cCCEEEEEEcCCCCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHH---HCCeecc
Confidence 57999999988743 356789999999999999988543 3788899999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-------CCCccccccccccCCC----CcCccccchhHHHHHHHHHhCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-------TNNFFNFQIAEYGMGS----EVSTSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-------~~~~~~y~aPE~~~~~----~~~~~~DiwS~G~vl~ell~g~~p 327 (427)
||||+|||++.++.+||+|||+++..... ..||+.|+|||++.+. .++.++|||||||++|||++|+.|
T Consensus 167 DLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~P 246 (370)
T cd05596 167 DVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 246 (370)
T ss_pred CCCHHHEEEcCCCCEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCC
Confidence 99999999999999999999999865332 2588999999998653 378999999999999999999999
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCC--CC
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRE--RM 405 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~--Rp 405 (427)
|..... ........... .. .. +. .....+.++.+++.+|++.+|++ ||
T Consensus 247 f~~~~~-----~~~~~~i~~~~-----~~-~~----------------~~---~~~~~s~~~~~li~~~L~~~p~r~~R~ 296 (370)
T cd05596 247 FYADSL-----VGTYSKIMDHK-----NS-LT----------------FP---DDIEISKQAKDLICAFLTDREVRLGRN 296 (370)
T ss_pred cCCCCH-----HHHHHHHHcCC-----Cc-CC----------------CC---CcCCCCHHHHHHHHHHccChhhccCCC
Confidence 975311 11111110000 00 00 00 01123566889999999999988 99
Q ss_pred CHHHHHHH
Q 042634 406 NMEEVAAQ 413 (427)
Q Consensus 406 t~~ev~~~ 413 (427)
|++|++++
T Consensus 297 s~~ell~h 304 (370)
T cd05596 297 GVDEIKSH 304 (370)
T ss_pred CHHHHhcC
Confidence 99999765
No 173
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.98 E-value=1.4e-32 Score=258.10 Aligned_cols=203 Identities=21% Similarity=0.351 Sum_probs=153.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh-------hhhccCHHHHHHHHHHHHHHHHHHhhcC
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE-------ALKNLNLLQRLSIAVDVASALDYLHHYC 251 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-------~~~~l~~~~~~~~~~~i~~~L~~LH~~~ 251 (427)
++|||++++++.+.. +...+++|||+++++|.+++..... ....+++..++.++.|++.||+|||
T Consensus 76 l~~~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH--- 147 (296)
T cd05051 76 LSDPNIARLLGVCTV-----DPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLE--- 147 (296)
T ss_pred cCCCCEeEEEEEEec-----CCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHH---
Confidence 469999999987543 4678999999999999998865431 1125889999999999999999999
Q ss_pred CCCeeeccccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCCCCcCccccchhHHHHHHHHHh
Q 042634 252 ETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323 (427)
Q Consensus 252 ~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~ 323 (427)
+.||+||||||+||+++.++.+||+|||.++..... ..++..|+|||++.+..++.++|||||||++||+++
T Consensus 148 ~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~ 227 (296)
T cd05051 148 SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILT 227 (296)
T ss_pred HcCccccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHh
Confidence 899999999999999999999999999999865322 144568999999988889999999999999999998
Q ss_pred --CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCC
Q 042634 324 --GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELP 401 (427)
Q Consensus 324 --g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP 401 (427)
|..||..... .............. .. . .....+..++.++.+++.+||+.||
T Consensus 228 ~~~~~p~~~~~~--~~~~~~~~~~~~~~-----~~--------~-----------~~~~~~~~~~~~l~~li~~cl~~~p 281 (296)
T cd05051 228 LCREQPYEHLTD--QQVIENAGHFFRDD-----GR--------Q-----------IYLPRPPNCPKDIYELMLECWRRDE 281 (296)
T ss_pred cCCCCCCCCcCh--HHHHHHHHhccccc-----cc--------c-----------ccCCCccCCCHHHHHHHHHHhccCh
Confidence 6777754311 11111111000000 00 0 0000112345679999999999999
Q ss_pred CCCCCHHHHHHHHH
Q 042634 402 RERMNMEEVAAQLL 415 (427)
Q Consensus 402 ~~Rpt~~ev~~~L~ 415 (427)
++|||+.||++.|+
T Consensus 282 ~~Rpt~~el~~~L~ 295 (296)
T cd05051 282 EDRPTFREIHLFLQ 295 (296)
T ss_pred hcCCCHHHHHHHhc
Confidence 99999999998885
No 174
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.98 E-value=1.7e-32 Score=252.07 Aligned_cols=196 Identities=30% Similarity=0.454 Sum_probs=156.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|+|++++++.+.. ....++||||+++++|.+++..... ..+++..+..++.|++.|+.||| ..|++||
T Consensus 57 l~~~~i~~~~~~~~~-----~~~~~~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~ 126 (256)
T cd05039 57 LRHPNLVQLLGVVLQ-----GNPLYIVTEYMAKGSLVDYLRSRGR--AVITLAQQLGFALDVCEGMEYLE---EKNFVHR 126 (256)
T ss_pred cCCcceeeeEEEEcC-----CCCeEEEEEecCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCccch
Confidence 469999999988543 4678999999999999999865432 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC---CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCcccCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT---NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNEMFTG 334 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~---~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~~~~~ 334 (427)
||||+||+++.++.+||+|||.++...... ..+..|+|||++....++.++||||||+++||+++ |..||.....
T Consensus 127 di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~- 205 (256)
T cd05039 127 DLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL- 205 (256)
T ss_pred hcccceEEEeCCCCEEEcccccccccccccccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH-
Confidence 999999999999999999999998764332 33457999999988889999999999999999997 9999864311
Q ss_pred CccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 042634 335 NLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQL 414 (427)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~L 414 (427)
..+......... ...+..++.++.+++++||+.+|++|||++|++++|
T Consensus 206 -~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l 253 (256)
T cd05039 206 -KDVVPHVEKGYR-------------------------------MEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQL 253 (256)
T ss_pred -HHHHHHHhcCCC-------------------------------CCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHH
Confidence 111111110000 001122456789999999999999999999999999
Q ss_pred HHH
Q 042634 415 LSF 417 (427)
Q Consensus 415 ~~~ 417 (427)
+.+
T Consensus 254 ~~~ 256 (256)
T cd05039 254 ALI 256 (256)
T ss_pred hcC
Confidence 753
No 175
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.98 E-value=2.6e-32 Score=252.74 Aligned_cols=195 Identities=24% Similarity=0.436 Sum_probs=154.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++.+.+. .+...++||||+++|+|.+++.... ..+++.+++.++.|++.|++||| +.|++||
T Consensus 62 l~h~ni~~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~~l~~al~~lH---~~g~~H~ 130 (269)
T cd05065 62 FDHPNIIHLEGVVT-----KSRPVMIITEFMENGALDSFLRQND---GQFTVIQLVGMLRGIAAGMKYLS---EMNYVHR 130 (269)
T ss_pred CCCcCcceEEEEEC-----CCCceEEEEecCCCCcHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHH---HCCEeec
Confidence 57999999988753 3567899999999999999886543 35889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC---------C--CccccccccccCCCCcCccccchhHHHHHHHHHh-CCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT---------N--NFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKR 326 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~---------~--~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~ 326 (427)
||||+||+++.++.+||+|||+++...... . .+..|+|||++.+..++.++|||||||++||+++ |..
T Consensus 131 dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~ 210 (269)
T cd05065 131 DLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER 210 (269)
T ss_pred ccChheEEEcCCCcEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCC
Confidence 999999999999999999999987653321 1 1346999999998999999999999999999886 999
Q ss_pred CCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC
Q 042634 327 PTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN 406 (427)
Q Consensus 327 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt 406 (427)
||..... ......+....+ ...+.+++..+.+++.+||+.+|++|||
T Consensus 211 p~~~~~~--~~~~~~i~~~~~-------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~ 257 (269)
T cd05065 211 PYWDMSN--QDVINAIEQDYR-------------------------------LPPPMDCPTALHQLMLDCWQKDRNARPK 257 (269)
T ss_pred CCCCCCH--HHHHHHHHcCCc-------------------------------CCCcccCCHHHHHHHHHHcCCChhhCcC
Confidence 9865311 111111110000 0012235567899999999999999999
Q ss_pred HHHHHHHHHHH
Q 042634 407 MEEVAAQLLSF 417 (427)
Q Consensus 407 ~~ev~~~L~~~ 417 (427)
+++|+..|+++
T Consensus 258 ~~~i~~~l~~~ 268 (269)
T cd05065 258 FGQIVSTLDKM 268 (269)
T ss_pred HHHHHHHHHhh
Confidence 99999998864
No 176
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.98 E-value=2.1e-32 Score=260.81 Aligned_cols=220 Identities=17% Similarity=0.203 Sum_probs=152.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. +...++||||+++|+|.+++..... ..+++..++.++.|++.||+||| +.||+||
T Consensus 56 l~hpniv~~~~~~~~-----~~~~~lv~e~~~~~~l~~~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH---~~~iiH~ 125 (327)
T cd08227 56 FNHPNIVPYRATFIA-----DNELWVVTSFMAYGSAKDLICTHFM--DGMSELAIAYILQGVLKALDYIH---HMGYVHR 125 (327)
T ss_pred cCCCCeeeEEEEEEE-----CCEEEEEEeccCCCcHHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHH---HCCEecC
Confidence 589999999988644 5678999999999999999865322 34889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC-------------cCCCccccccccccCC--CCcCccccchhHHHHHHHHHh
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE-------------ATNNFFNFQIAEYGMG--SEVSTSGDVYSFGILLLETFT 323 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~-------------~~~~~~~y~aPE~~~~--~~~~~~~DiwS~G~vl~ell~ 323 (427)
||||+||+++.++.++++|||.+..... ...++..|+|||++.+ ..++.++|||||||++|||++
T Consensus 126 dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~ 205 (327)
T cd08227 126 SVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELAN 205 (327)
T ss_pred CCChhhEEEecCCcEEEcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHH
Confidence 9999999999999999999986543311 1145567999999876 468999999999999999999
Q ss_pred CCCCCCcccCCCccHHHHHHHhcccchhcccCcc-------------ccccccccchhh----hccccccccccchHHHH
Q 042634 324 GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPV-------------LLVEREEGETSK----ANAHKQFTRSFSVKECL 386 (427)
Q Consensus 324 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 386 (427)
|+.||........ ...... .......+.. ...+........ ................+
T Consensus 206 g~~pf~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (327)
T cd08227 206 GHVPFKDMPATQM-LLEKLN----GTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFS 280 (327)
T ss_pred CCCCCCCcchhHH-HHHHhc----CCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccC
Confidence 9999975422111 111111 1111111000 000000000000 00000000011123345
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 042634 387 VSVLGIGVTCSSELPRERMNMEEVAAQ 413 (427)
Q Consensus 387 ~~~~~l~~~cl~~dP~~Rpt~~ev~~~ 413 (427)
.++.+++.+||+.||++|||++|+++.
T Consensus 281 ~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 281 PHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred HHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 678999999999999999999999873
No 177
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.98 E-value=9.6e-33 Score=266.84 Aligned_cols=141 Identities=24% Similarity=0.328 Sum_probs=125.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||+|+++++.+. .....++||||+++|+|.+++... ..+++..++.++.|++.||+||| +.||+||
T Consensus 58 ~~~~~iv~~~~~~~-----~~~~~~lv~E~~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~lH---~~givHr 125 (363)
T cd05628 58 ADSLWVVKMFYSFQ-----DKLNLYLIMEFLPGGDMMTLLMKK----DTLTEEETQFYIAETVLAIDSIH---QLGFIHR 125 (363)
T ss_pred CCCCCcceEEEEEe-----cCCeEEEEEcCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEec
Confidence 47999999998743 356789999999999999998654 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC-----------------------------------------cCCCccccccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE-----------------------------------------ATNNFFNFQIA 297 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~-----------------------------------------~~~~~~~y~aP 297 (427)
||||+|||++.++.+||+|||+|+.... ...||..|+||
T Consensus 126 DlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aP 205 (363)
T cd05628 126 DIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAP 205 (363)
T ss_pred CCCHHHeEECCCCCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCH
Confidence 9999999999999999999999875421 12688999999
Q ss_pred cccCCCCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 298 EYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 298 E~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
|++.+..++.++|||||||++|||++|+.||.+.
T Consensus 206 E~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~ 239 (363)
T cd05628 206 EVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSE 239 (363)
T ss_pred HHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999999999999999753
No 178
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.98 E-value=2e-32 Score=250.58 Aligned_cols=193 Identities=25% Similarity=0.392 Sum_probs=152.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. ....++||||+++++|.+++.... ..+++..+..++.|++.||.|+| .+|++||
T Consensus 49 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~~~H~ 117 (250)
T cd05085 49 YDHPNIVKLIGVCTQ-----RQPIYIVMELVPGGDFLSFLRKKK---DELKTKQLVKFALDAAAGMAYLE---SKNCIHR 117 (250)
T ss_pred CCCCCcCeEEEEEec-----CCccEEEEECCCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeec
Confidence 479999999988644 456899999999999999886543 34789999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC-------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT-------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~-------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~ 330 (427)
||||+||+++.++.+||+|||++....... .++..|+|||++.+..++.++|||||||++||+++ |..||..
T Consensus 118 dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~ 197 (250)
T cd05085 118 DLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPG 197 (250)
T ss_pred ccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCC
Confidence 999999999999999999999997543322 33457999999988889999999999999999998 9999865
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
.... .....+...... ..+..++.++.+++.+||+.+|++|||+.|+
T Consensus 198 ~~~~--~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l 244 (250)
T cd05085 198 MTNQ--QAREQVEKGYRM-------------------------------SCPQKCPDDVYKVMQRCWDYKPENRPKFSEL 244 (250)
T ss_pred CCHH--HHHHHHHcCCCC-------------------------------CCCCCCCHHHHHHHHHHcccCcccCCCHHHH
Confidence 3111 111100000000 0112245678999999999999999999999
Q ss_pred HHHHH
Q 042634 411 AAQLL 415 (427)
Q Consensus 411 ~~~L~ 415 (427)
++.|.
T Consensus 245 ~~~l~ 249 (250)
T cd05085 245 QKELA 249 (250)
T ss_pred HHHhc
Confidence 99874
No 179
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.98 E-value=1.6e-32 Score=254.14 Aligned_cols=197 Identities=26% Similarity=0.432 Sum_probs=153.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhh---hhccCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREA---LKNLNLLQRLSIAVDVASALDYLHHYCETPI 255 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~---~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~i 255 (427)
++||||+++++.+.. ....++||||+++++|.+++...... ...+++.+++.++.|++.||+||| +.++
T Consensus 56 l~h~~i~~~~~~~~~-----~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i 127 (269)
T cd05044 56 FNHPNIVKLLGVCLL-----NEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLE---QMHF 127 (269)
T ss_pred cCCCCeeeEeeeecC-----CCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHH---hCCc
Confidence 579999999988543 45689999999999999998643211 134788999999999999999999 8999
Q ss_pred eeccccCCceeeCCCC-----ceEecccccccccCCc--------CCCccccccccccCCCCcCccccchhHHHHHHHHH
Q 042634 256 VHCDLKPSNVLLDGEL-----TAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETF 322 (427)
Q Consensus 256 vHrDlkp~NIll~~~~-----~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell 322 (427)
+|+||||+||+++.+. .+||+|||+++..... ..++..|+|||++.+..++.++|||||||++|||+
T Consensus 128 ~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ell 207 (269)
T cd05044 128 IHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEIL 207 (269)
T ss_pred ccCCCChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHH
Confidence 9999999999998877 8999999999755322 13456899999999989999999999999999999
Q ss_pred h-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCC
Q 042634 323 T-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELP 401 (427)
Q Consensus 323 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP 401 (427)
+ |..||..... ......+.. . . ....+...+..+.+++.+||+.+|
T Consensus 208 t~g~~p~~~~~~--~~~~~~~~~---~---~-------------------------~~~~~~~~~~~~~~li~~~l~~~p 254 (269)
T cd05044 208 TLGQQPYPALNN--QEVLQHVTA---G---G-------------------------RLQKPENCPDKIYQLMTNCWAQDP 254 (269)
T ss_pred HcCCCCCcccCH--HHHHHHHhc---C---C-------------------------ccCCcccchHHHHHHHHHHcCCCc
Confidence 8 9999864311 111111000 0 0 000122346678999999999999
Q ss_pred CCCCCHHHHHHHHHH
Q 042634 402 RERMNMEEVAAQLLS 416 (427)
Q Consensus 402 ~~Rpt~~ev~~~L~~ 416 (427)
++|||++|+++.|++
T Consensus 255 ~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 255 SERPTFDRIQEILQN 269 (269)
T ss_pred ccCCCHHHHHHHHhC
Confidence 999999999998863
No 180
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.98 E-value=3.2e-32 Score=250.57 Aligned_cols=196 Identities=27% Similarity=0.463 Sum_probs=157.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhh-----hhccCHHHHHHHHHHHHHHHHHHhhcCCC
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREA-----LKNLNLLQRLSIAVDVASALDYLHHYCET 253 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-----~~~l~~~~~~~~~~~i~~~L~~LH~~~~~ 253 (427)
++|+|++++++.+.. ....+++|||+++++|.+++...... ...+++..+..++.|++.||+||| ++
T Consensus 53 ~~~~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~ 124 (262)
T cd00192 53 LGHPNVVRLLGVCTE-----EEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA---SK 124 (262)
T ss_pred cCCCChheeeeeecC-----CCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHH---cC
Confidence 459999999988544 56789999999999999998765211 145899999999999999999999 89
Q ss_pred CeeeccccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCCCCcCccccchhHHHHHHHHHh-C
Q 042634 254 PIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-G 324 (427)
Q Consensus 254 ~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g 324 (427)
|++||||||+||+++.++.+||+|||.+...... ..++..|+|||.+....++.++||||+||++|||++ |
T Consensus 125 ~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g 204 (262)
T cd00192 125 KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLG 204 (262)
T ss_pred CcccCccCcceEEECCCCcEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999876542 256778999999988889999999999999999999 6
Q ss_pred CCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCC
Q 042634 325 KRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRER 404 (427)
Q Consensus 325 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~R 404 (427)
..||.... ...+.+.... . . ....+..++.++.+++.+||+.+|++|
T Consensus 205 ~~p~~~~~--~~~~~~~~~~---~--------~--------------------~~~~~~~~~~~~~~li~~~l~~~p~~R 251 (262)
T cd00192 205 ATPYPGLS--NEEVLEYLRK---G--------Y--------------------RLPKPEYCPDELYELMLSCWQLDPEDR 251 (262)
T ss_pred CCCCCCCC--HHHHHHHHHc---C--------C--------------------CCCCCccCChHHHHHHHHHccCCcccC
Confidence 99987641 1111111110 0 0 000123346678999999999999999
Q ss_pred CCHHHHHHHHH
Q 042634 405 MNMEEVAAQLL 415 (427)
Q Consensus 405 pt~~ev~~~L~ 415 (427)
||++|+++.|+
T Consensus 252 ps~~~l~~~l~ 262 (262)
T cd00192 252 PTFSELVERLE 262 (262)
T ss_pred cCHHHHHHhhC
Confidence 99999998873
No 181
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.98 E-value=1.1e-32 Score=259.00 Aligned_cols=191 Identities=19% Similarity=0.266 Sum_probs=151.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. +...++||||+++++|.+++.+. .+++.++..++.|++.||+||| ..||+||
T Consensus 74 ~~h~~v~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~i~~ql~~aL~~LH---~~gi~H~ 140 (296)
T cd06654 74 NKNPNIVNYLDSYLV-----GDELWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLH---SNQVIHR 140 (296)
T ss_pred CCCCCEeeEEEEEEe-----CCEEEEeecccCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHH---HCCcccC
Confidence 479999999987543 56789999999999999988542 3788899999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||.+...... ..++..|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 141 dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~ 220 (296)
T cd06654 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 220 (296)
T ss_pred CCCHHHEEEcCCCCEEECccccchhccccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999998765322 267788999999998889999999999999999999999996532
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
... .+........+ . ...+...+..+.+++.+||..+|++|||++|+++
T Consensus 221 ~~~-~~~~~~~~~~~----~--------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 221 PLR-ALYLIATNGTP----E--------------------------LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred HHH-hHHHHhcCCCC----C--------------------------CCCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 110 01000000000 0 0012234456889999999999999999999987
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
.
T Consensus 270 ~ 270 (296)
T cd06654 270 H 270 (296)
T ss_pred C
Confidence 4
No 182
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.97 E-value=1.5e-32 Score=267.22 Aligned_cols=157 Identities=25% Similarity=0.309 Sum_probs=123.3
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccccCCceeeCCCCceEecccccccccCCc--------CCCcccccccc
Q 042634 227 NLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAE 298 (427)
Q Consensus 227 ~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE 298 (427)
.+++..++.++.|++.||+||| ..+|+||||||+|||+++++.+||+|||+++..... ..++..|+|||
T Consensus 235 ~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE 311 (401)
T cd05107 235 ALSYMDLVGFSYQVANGMEFLA---SKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPE 311 (401)
T ss_pred CCCHHHHHHHHHHHHHHHHHHh---cCCcCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChH
Confidence 3677788999999999999999 899999999999999999999999999999864321 14567899999
Q ss_pred ccCCCCcCccccchhHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccc
Q 042634 299 YGMGSEVSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFT 377 (427)
Q Consensus 299 ~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (427)
.+.+..++.++|||||||++|||++ |..||....... .....+....+.
T Consensus 312 ~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~-~~~~~~~~~~~~----------------------------- 361 (401)
T cd05107 312 SIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNE-QFYNAIKRGYRM----------------------------- 361 (401)
T ss_pred HhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchH-HHHHHHHcCCCC-----------------------------
Confidence 9998889999999999999999998 888986532111 011111100000
Q ss_pred cccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHH
Q 042634 378 RSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQLLSFR 418 (427)
Q Consensus 378 ~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~L~~~~ 418 (427)
..+..++.++.+++.+||+.+|++|||++||++.|+++.
T Consensus 362 --~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 362 --AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred --CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 011224567899999999999999999999999998763
No 183
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=1.9e-32 Score=267.23 Aligned_cols=218 Identities=19% Similarity=0.187 Sum_probs=153.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+. .....++|||++ .++|.+++... ..+++..++.++.|++.||+||| +.||+||
T Consensus 143 l~h~~iv~~~~~~~-----~~~~~~lv~e~~-~~~l~~~l~~~----~~l~~~~~~~i~~ql~~aL~~LH---~~givHr 209 (392)
T PHA03207 143 ISHRAIINLIHAYR-----WKSTVCMVMPKY-KCDLFTYVDRS----GPLPLEQAITIQRRLLEALAYLH---GRGIIHR 209 (392)
T ss_pred cCCCCccceeeeEe-----eCCEEEEEehhc-CCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccc
Confidence 57999999998743 356789999999 57888888433 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
||||+|||++.++.+||+|||+++..... ..||..|+|||++.+..++.++|||||||++|||++|+.||.+
T Consensus 210 Dlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~ 289 (392)
T PHA03207 210 DVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFG 289 (392)
T ss_pred CCCHHHEEEcCCCCEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 99999999999999999999999765432 2688999999999999999999999999999999999999976
Q ss_pred ccCCC--ccHHHHHHHhcccchhcccCc---cccccccccchhhhccccccc--cccchHHHHHHHHHHHhhcCCCCCCC
Q 042634 331 MFTGN--LTLHNFVKEALPERLAEIVDP---VLLVEREEGETSKANAHKQFT--RSFSVKECLVSVLGIGVTCSSELPRE 403 (427)
Q Consensus 331 ~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~cl~~dP~~ 403 (427)
..... ..+............ +.... .+........ ......+. ........+.++.+++.+||..||++
T Consensus 290 ~~~~~~~~~l~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~ 365 (392)
T PHA03207 290 KQVKSSSSQLRSIIRCMQVHPL-EFPQNGSTNLCKHFKQYA---IVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEF 365 (392)
T ss_pred CCCCCcHHHHHHHHHHhccCcc-ccCCccchhHHHHHHhhc---ccccCCccccchhhccCcchhHHHHHHHHhccChhh
Confidence 43221 112111111110000 00000 0000000000 00000000 00001123456788999999999999
Q ss_pred CCCHHHHHHH
Q 042634 404 RMNMEEVAAQ 413 (427)
Q Consensus 404 Rpt~~ev~~~ 413 (427)
|||+.|++.+
T Consensus 366 Rpsa~e~l~~ 375 (392)
T PHA03207 366 RPSAQDILSL 375 (392)
T ss_pred CCCHHHHhhC
Confidence 9999999875
No 184
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=1.9e-32 Score=264.06 Aligned_cols=138 Identities=22% Similarity=0.363 Sum_probs=119.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+ .++|.+++.... ..+++..++.++.||+.||+||| +.||+||
T Consensus 114 l~h~~iv~~~~~~~~-----~~~~~lv~e~~-~~~l~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHr 181 (357)
T PHA03209 114 VNHPSVIRMKDTLVS-----GAITCMVLPHY-SSDLYTYLTKRS---RPLPIDQALIIEKQILEGLRYLH---AQRIIHR 181 (357)
T ss_pred CCCCCCcChhheEEe-----CCeeEEEEEcc-CCcHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecC
Confidence 579999999998644 55789999999 678888876433 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC-----cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE-----ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPT 328 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf 328 (427)
||||+|||++.++.+||+|||.++.... ...||..|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 182 Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 182 DVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred CCCHHHEEECCCCCEEEecCccccccccCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 9999999999999999999999975432 226889999999999999999999999999999999865544
No 185
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.97 E-value=2.8e-33 Score=267.15 Aligned_cols=188 Identities=21% Similarity=0.216 Sum_probs=146.8
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecc
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrD 259 (427)
+||+|+++++.+.. ....++||||+++|+|.+++... ..+++..++.++.||+.||+||| +.||+|||
T Consensus 54 ~~p~i~~~~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~qil~al~~LH---~~~ivHrD 121 (330)
T cd05586 54 ESPFIVGLKFSFQT-----DSDLYLVTDYMSGGELFWHLQKE----GRFSEDRAKFYIAELVLALEHLH---KYDIVYRD 121 (330)
T ss_pred CCCcCcceEEEEec-----CCeEEEEEcCCCCChHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecc
Confidence 69999999887433 56789999999999999888654 45899999999999999999999 89999999
Q ss_pred ccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCCC-CcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 260 LKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGS-EVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 260 lkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~-~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
|||+|||++.++.+||+|||+++.... ...||..|+|||++.+. .++.++||||+||++|||++|+.||....
T Consensus 122 lkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~ 201 (330)
T cd05586 122 LKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAED 201 (330)
T ss_pred CCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCC
Confidence 999999999999999999999875422 12688999999998764 47999999999999999999999996531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC----CHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM----NME 408 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp----t~~ 408 (427)
..+.......... . + .....+.++.+++.+||+.||++|| +++
T Consensus 202 -----~~~~~~~i~~~~~-~-----------------------~----~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~ 248 (330)
T cd05586 202 -----TQQMYRNIAFGKV-R-----------------------F----PKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAV 248 (330)
T ss_pred -----HHHHHHHHHcCCC-C-----------------------C----CCccCCHHHHHHHHHHcCCCHHHCCCCCCCHH
Confidence 1111111110000 0 0 0111345578899999999999998 455
Q ss_pred HHHH
Q 042634 409 EVAA 412 (427)
Q Consensus 409 ev~~ 412 (427)
|+++
T Consensus 249 ~ll~ 252 (330)
T cd05586 249 ELKE 252 (330)
T ss_pred HHhc
Confidence 6554
No 186
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.97 E-value=8.9e-33 Score=256.22 Aligned_cols=197 Identities=20% Similarity=0.250 Sum_probs=151.2
Q ss_pred cccccchhhhccccccCCCC-CCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 179 IRHRNLVKIITSCASVDFQG-NDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
.+|||++++++.+......+ ....+++|||+++++|.+++..... ..+++..+..++.|++.|++||| +.+|+|
T Consensus 60 ~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~--~~l~~~~~~~~~~qi~~~l~~LH---~~~ivh 134 (272)
T cd06637 60 SHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG--NTLKEEWIAYICREILRGLSHLH---QHKVIH 134 (272)
T ss_pred cCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHH---HCCCcc
Confidence 36999999999875532221 2457899999999999998875322 45889999999999999999999 899999
Q ss_pred ccccCCceeeCCCCceEecccccccccCCc------CCCccccccccccC-----CCCcCccccchhHHHHHHHHHhCCC
Q 042634 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGM-----GSEVSTSGDVYSFGILLLETFTGKR 326 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~-----~~~~~~~~DiwS~G~vl~ell~g~~ 326 (427)
|||||+||++++++.+||+|||+++..... ..++..|+|||++. ...++.++|||||||++|||++|..
T Consensus 135 ~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~ 214 (272)
T cd06637 135 RDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAP 214 (272)
T ss_pred CCCCHHHEEECCCCCEEEccCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999865322 25778899999986 3457889999999999999999999
Q ss_pred CCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC
Q 042634 327 PTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN 406 (427)
Q Consensus 327 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt 406 (427)
||...... .... ...... . +......++.++.+++.+||..||.+|||
T Consensus 215 p~~~~~~~----~~~~-~~~~~~-----~----------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt 262 (272)
T cd06637 215 PLCDMHPM----RALF-LIPRNP-----A----------------------PRLKSKKWSKKFQSFIESCLVKNHSQRPT 262 (272)
T ss_pred CccccCHH----HHHH-HHhcCC-----C----------------------CCCCCCCcCHHHHHHHHHHcCCChhhCCC
Confidence 98643110 0000 000000 0 00011224456899999999999999999
Q ss_pred HHHHHH
Q 042634 407 MEEVAA 412 (427)
Q Consensus 407 ~~ev~~ 412 (427)
++|+++
T Consensus 263 ~~~il~ 268 (272)
T cd06637 263 TEQLMK 268 (272)
T ss_pred HHHHhh
Confidence 999976
No 187
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.97 E-value=3.2e-32 Score=255.89 Aligned_cols=204 Identities=23% Similarity=0.396 Sum_probs=153.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhh-------hhccCHHHHHHHHHHHHHHHHHHhhcC
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREA-------LKNLNLLQRLSIAVDVASALDYLHHYC 251 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-------~~~l~~~~~~~~~~~i~~~L~~LH~~~ 251 (427)
++||||+++++.+.. +...+++|||+++|+|.+++...... ...+++.++..++.|++.||+|||
T Consensus 76 l~~~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH--- 147 (296)
T cd05095 76 LKDPNIIRLLAVCIT-----SDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS--- 147 (296)
T ss_pred CCCCCcceEEEEEec-----CCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHH---
Confidence 579999999987533 45689999999999999988653211 124778899999999999999999
Q ss_pred CCCeeeccccCCceeeCCCCceEecccccccccCCcC--------CCccccccccccCCCCcCccccchhHHHHHHHHHh
Q 042634 252 ETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT--------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323 (427)
Q Consensus 252 ~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~--------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~ 323 (427)
+.|++||||||+||+++.++.+||+|||.++...... .++..|+|||...+..++.++|||||||++|||++
T Consensus 148 ~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~ 227 (296)
T cd05095 148 SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILT 227 (296)
T ss_pred HCCeecccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHH
Confidence 8999999999999999999999999999998653221 23467999999888889999999999999999998
Q ss_pred --CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCC
Q 042634 324 --GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELP 401 (427)
Q Consensus 324 --g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP 401 (427)
|..||...... ............ ..... . ...+..++..+.+++.+||+.||
T Consensus 228 ~~~~~p~~~~~~~--~~~~~~~~~~~~----~~~~~------------------~--~~~~~~~~~~~~~li~~cl~~~p 281 (296)
T cd05095 228 LCKEQPYSQLSDE--QVIENTGEFFRD----QGRQV------------------Y--LPKPALCPDSLYKLMLSCWRRNA 281 (296)
T ss_pred hCCCCCccccChH--HHHHHHHHHHhh----ccccc------------------c--CCCCCCCCHHHHHHHHHHcCCCc
Confidence 77887643111 111000000000 00000 0 00122345678999999999999
Q ss_pred CCCCCHHHHHHHHHH
Q 042634 402 RERMNMEEVAAQLLS 416 (427)
Q Consensus 402 ~~Rpt~~ev~~~L~~ 416 (427)
++|||+.||++.|++
T Consensus 282 ~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 282 KERPSFQEIHATLLE 296 (296)
T ss_pred ccCCCHHHHHHHHhC
Confidence 999999999998863
No 188
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.97 E-value=1.8e-32 Score=252.04 Aligned_cols=194 Identities=23% Similarity=0.380 Sum_probs=154.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. ...++||||+++++|.+++..... ..+++..+..++.|++.||+||| ..|++||
T Consensus 53 l~h~~iv~~~~~~~~------~~~~~v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~ 121 (257)
T cd05040 53 LDHENLIRLYGVVLT------HPLMMVTELAPLGSLLDRLRKDAL--GHFLISTLCDYAVQIANGMRYLE---SKRFIHR 121 (257)
T ss_pred cCCCCccceeEEEcC------CeEEEEEEecCCCcHHHHHHhccc--ccCcHHHHHHHHHHHHHHHHHHH---hCCcccc
Confidence 579999999887533 567999999999999999876532 35889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc---------CCCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA---------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPT 328 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~---------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf 328 (427)
||||+||+++.++.+||+|||.++..... ..++..|+|||++.+..++.++|||||||++|||++ |..||
T Consensus 122 di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~ 201 (257)
T cd05040 122 DLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPW 201 (257)
T ss_pred ccCcccEEEecCCEEEeccccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999876442 245678999999988899999999999999999998 99998
Q ss_pred CcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 329 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
...... ......... . .. ...+...+..+.+++.+||+.+|++|||+.
T Consensus 202 ~~~~~~--~~~~~~~~~--~------~~----------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 249 (257)
T cd05040 202 AGLSGS--QILKKIDKE--G------ER----------------------LERPEACPQDIYNVMLQCWAHNPADRPTFA 249 (257)
T ss_pred CCCCHH--HHHHHHHhc--C------Cc----------------------CCCCccCCHHHHHHHHHHCCCCcccCCCHH
Confidence 643111 111111000 0 00 001122456789999999999999999999
Q ss_pred HHHHHHH
Q 042634 409 EVAAQLL 415 (427)
Q Consensus 409 ev~~~L~ 415 (427)
|+++.|.
T Consensus 250 ~~~~~l~ 256 (257)
T cd05040 250 ALREFLP 256 (257)
T ss_pred HHHHHhc
Confidence 9999875
No 189
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.97 E-value=4e-33 Score=266.08 Aligned_cols=193 Identities=19% Similarity=0.227 Sum_probs=150.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+||||+++++.+.. +...++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.||+||
T Consensus 58 ~~~~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~---~~l~~~~~~~~~~qi~~aL~~lH---~~~i~H~ 126 (330)
T cd05601 58 SNSPWIPQLQYAFQD-----KDNLYLVMEYQPGGDLLSLLNRYE---DQFDEDMAQFYLAELVLAIHSVH---QMGYVHR 126 (330)
T ss_pred CCCCCCcceeeEEec-----CCeEEEEECCCCCCCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeEcc
Confidence 579999999887433 567899999999999999986542 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-------CCCccccccccccC------CCCcCccccchhHHHHHHHHHhCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-------TNNFFNFQIAEYGM------GSEVSTSGDVYSFGILLLETFTGK 325 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-------~~~~~~y~aPE~~~------~~~~~~~~DiwS~G~vl~ell~g~ 325 (427)
||||+||+++.++.+||+|||+++..... ..++..|+|||++. ...++.++|||||||++|||++|+
T Consensus 127 Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~ 206 (330)
T cd05601 127 DIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGR 206 (330)
T ss_pred cCchHheEECCCCCEEeccCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCC
Confidence 99999999999999999999999865432 25788999999986 456789999999999999999999
Q ss_pred CCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC
Q 042634 326 RPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM 405 (427)
Q Consensus 326 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp 405 (427)
.||..... .......... ..... +. .....+.++.+++.+|++ +|++||
T Consensus 207 ~Pf~~~~~-----~~~~~~i~~~------~~~~~----------------~~---~~~~~~~~~~~li~~ll~-~p~~R~ 255 (330)
T cd05601 207 SPFHEGTS-----AKTYNNIMNF------QRFLK----------------FP---EDPKVSSDFLDLIQSLLC-GQKERL 255 (330)
T ss_pred CCCCCCCH-----HHHHHHHHcC------CCccC----------------CC---CCCCCCHHHHHHHHHHcc-ChhhCC
Confidence 99975311 1111110000 00000 00 011234568889999998 999999
Q ss_pred CHHHHHHH
Q 042634 406 NMEEVAAQ 413 (427)
Q Consensus 406 t~~ev~~~ 413 (427)
|+++++++
T Consensus 256 t~~~l~~h 263 (330)
T cd05601 256 GYEGLCCH 263 (330)
T ss_pred CHHHHhCC
Confidence 99998853
No 190
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.97 E-value=1.1e-32 Score=265.79 Aligned_cols=224 Identities=18% Similarity=0.197 Sum_probs=151.4
Q ss_pred cccccchhhhccccccC-CCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 179 IRHRNLVKIITSCASVD-FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~-~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
++||||+++++.+.... +......++||||++ +++.+.+. ..+++..+..++.|++.||+||| ++||+|
T Consensus 73 l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~------~~l~~~~~~~~~~qi~~aL~~LH---~~givH 142 (355)
T cd07874 73 VNHKNIISLLNVFTPQKSLEEFQDVYLVMELMD-ANLCQVIQ------MELDHERMSYLLYQMLCGIKHLH---SAGIIH 142 (355)
T ss_pred hCCCchhceeeeeeccccccccceeEEEhhhhc-ccHHHHHh------hcCCHHHHHHHHHHHHHHHHHHH---hCCccc
Confidence 57999999998764321 122345689999995 56666553 23788899999999999999999 899999
Q ss_pred ccccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
|||||+||+++.++.+||+|||+++..... ..++..|+|||++.+..++.++|||||||++|||++|+.||.+..
T Consensus 143 rDikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 222 (355)
T cd07874 143 RDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 222 (355)
T ss_pred CCCChHHEEECCCCCEEEeeCcccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999999999875433 267889999999999999999999999999999999999997532
Q ss_pred CCCccHHHHHHHhcc--cchhcccCccccccccccch------hhhcccccc-ccccchHHHHHHHHHHHhhcCCCCCCC
Q 042634 333 TGNLTLHNFVKEALP--ERLAEIVDPVLLVEREEGET------SKANAHKQF-TRSFSVKECLVSVLGIGVTCSSELPRE 403 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~~~~l~~~cl~~dP~~ 403 (427)
.. ..+...+..... ........+........... ........+ ...........++.+++.+|++.||++
T Consensus 223 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~ 301 (355)
T cd07874 223 YI-DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 301 (355)
T ss_pred HH-HHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchh
Confidence 11 111111111100 00000000000000000000 000000000 000111223456889999999999999
Q ss_pred CCCHHHHHHH
Q 042634 404 RMNMEEVAAQ 413 (427)
Q Consensus 404 Rpt~~ev~~~ 413 (427)
|||+.|++++
T Consensus 302 Rps~~ell~h 311 (355)
T cd07874 302 RISVDEALQH 311 (355)
T ss_pred cCCHHHHhcC
Confidence 9999999985
No 191
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.97 E-value=1.6e-32 Score=253.92 Aligned_cols=194 Identities=21% Similarity=0.246 Sum_probs=149.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. ....++||||+++++|.+++... ..+++.+++.++.|++.|++||| ..|++||
T Consensus 63 l~h~~ii~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~ 130 (267)
T cd06645 63 CKHSNIVAYFGSYLR-----RDKLWICMEFCGGGSLQDIYHVT----GPLSESQIAYVSRETLQGLYYLH---SKGKMHR 130 (267)
T ss_pred CCCCCeeeEEEEEEe-----CCEEEEEEeccCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecC
Confidence 579999999987543 56789999999999999988654 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccC---CCCcCccccchhHHHHHHHHHhCCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGM---GSEVSTSGDVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~---~~~~~~~~DiwS~G~vl~ell~g~~pf~ 329 (427)
||||+||+++.++.+||+|||++...... ..++..|+|||++. ...++.++||||+||++|||++|..||.
T Consensus 131 dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~ 210 (267)
T cd06645 131 DIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMF 210 (267)
T ss_pred CCCHHHEEECCCCCEEECcceeeeEccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcc
Confidence 99999999999999999999998754322 26788999999874 4557899999999999999999999986
Q ss_pred cccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 330 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
....... .......... .+.. ......+..+.+++.+||+.+|++|||++|
T Consensus 211 ~~~~~~~-~~~~~~~~~~-------~~~~---------------------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ 261 (267)
T cd06645 211 DLHPMRA-LFLMTKSNFQ-------PPKL---------------------KDKMKWSNSFHHFVKMALTKNPKKRPTAEK 261 (267)
T ss_pred cccchhh-HHhhhccCCC-------CCcc---------------------cccCCCCHHHHHHHHHHccCCchhCcCHHH
Confidence 4321110 0000000000 0000 000113445789999999999999999999
Q ss_pred HHHH
Q 042634 410 VAAQ 413 (427)
Q Consensus 410 v~~~ 413 (427)
++++
T Consensus 262 ll~~ 265 (267)
T cd06645 262 LLQH 265 (267)
T ss_pred HhcC
Confidence 8763
No 192
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.97 E-value=1.3e-32 Score=257.15 Aligned_cols=201 Identities=19% Similarity=0.199 Sum_probs=153.3
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecc
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrD 259 (427)
+|||++++++.+.......+...++||||+++++|.+++.........+++..+..++.|++.||.||| +.+++|||
T Consensus 73 ~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~d 149 (286)
T cd06638 73 DHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLH---VNKTIHRD 149 (286)
T ss_pred cCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHH---hCCccccC
Confidence 699999999987554444456789999999999999887533222245888999999999999999999 89999999
Q ss_pred ccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCC-----CCcCccccchhHHHHHHHHHhCCCCC
Q 042634 260 LKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMG-----SEVSTSGDVYSFGILLLETFTGKRPT 328 (427)
Q Consensus 260 lkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~-----~~~~~~~DiwS~G~vl~ell~g~~pf 328 (427)
|||+||+++.++.+||+|||+++..... ..++..|+|||++.. ..++.++||||+||++|||++|+.||
T Consensus 150 lkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~ 229 (286)
T cd06638 150 VKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPL 229 (286)
T ss_pred CCHHhEEECCCCCEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCC
Confidence 9999999999999999999999765332 257889999998753 45788999999999999999999998
Q ss_pred CcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 329 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
..... .... ...... .... ...+..++.++.+++.+||+.||++|||+.
T Consensus 230 ~~~~~----~~~~-~~~~~~-----~~~~---------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 278 (286)
T cd06638 230 ADLHP----MRAL-FKIPRN-----PPPT---------------------LHQPELWSNEFNDFIRKCLTKDYEKRPTVS 278 (286)
T ss_pred CCCch----hHHH-hhcccc-----CCCc---------------------ccCCCCcCHHHHHHHHHHccCCcccCCCHH
Confidence 65311 0000 000000 0000 001112345688999999999999999999
Q ss_pred HHHHHH
Q 042634 409 EVAAQL 414 (427)
Q Consensus 409 ev~~~L 414 (427)
|+++..
T Consensus 279 ell~~~ 284 (286)
T cd06638 279 DLLQHV 284 (286)
T ss_pred HHhhcc
Confidence 998753
No 193
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=3.2e-32 Score=260.26 Aligned_cols=199 Identities=24% Similarity=0.400 Sum_probs=156.8
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh------------hhhccCHHHHHHHHHHHHHHHHHH
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE------------ALKNLNLLQRLSIAVDVASALDYL 247 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~~~~~i~~~L~~L 247 (427)
+||||+++++.+.. ....+++|||+++|+|.+++..... ....+++.+++.++.|++.||+||
T Consensus 76 ~h~~iv~~~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~L 150 (334)
T cd05100 76 KHKNIINLLGACTQ-----DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYL 150 (334)
T ss_pred CCCCeeeeeEEEcc-----CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHH
Confidence 79999999998644 4568999999999999998864321 113478889999999999999999
Q ss_pred hhcCCCCeeeccccCCceeeCCCCceEecccccccccCCcC--------CCccccccccccCCCCcCccccchhHHHHHH
Q 042634 248 HHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT--------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLL 319 (427)
Q Consensus 248 H~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~--------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ 319 (427)
| ++|++||||||+||+++.++.+||+|||.++...... .++..|+|||++.+..++.++|||||||++|
T Consensus 151 H---~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 227 (334)
T cd05100 151 A---SQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLW 227 (334)
T ss_pred H---HCCeeccccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHH
Confidence 9 8999999999999999999999999999998653321 3345799999999999999999999999999
Q ss_pred HHHh-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCC
Q 042634 320 ETFT-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSS 398 (427)
Q Consensus 320 ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~ 398 (427)
||++ |..||.... ..+........... ..+..++.++.+++.+||+
T Consensus 228 el~~~g~~p~~~~~-----~~~~~~~~~~~~~~----------------------------~~~~~~~~~l~~li~~cl~ 274 (334)
T cd05100 228 EIFTLGGSPYPGIP-----VEELFKLLKEGHRM----------------------------DKPANCTHELYMIMRECWH 274 (334)
T ss_pred HHHhcCCCCCCCCC-----HHHHHHHHHcCCCC----------------------------CCCCCCCHHHHHHHHHHcc
Confidence 9998 888886531 11111111000000 0112245678999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHH
Q 042634 399 ELPRERMNMEEVAAQLLSFRN 419 (427)
Q Consensus 399 ~dP~~Rpt~~ev~~~L~~~~~ 419 (427)
.+|++|||+.|+++.|+++..
T Consensus 275 ~~p~~Rps~~ell~~l~~~~~ 295 (334)
T cd05100 275 AVPSQRPTFKQLVEDLDRVLT 295 (334)
T ss_pred cChhhCcCHHHHHHHHHHHhh
Confidence 999999999999999998874
No 194
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.97 E-value=3.4e-32 Score=255.52 Aligned_cols=203 Identities=23% Similarity=0.382 Sum_probs=152.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh--------hhhccCHHHHHHHHHHHHHHHHHHhhc
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE--------ALKNLNLLQRLSIAVDVASALDYLHHY 250 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--------~~~~l~~~~~~~~~~~i~~~L~~LH~~ 250 (427)
++|||++++++.+.. ....++||||+++++|.+++..... ....+++..+..++.|++.||+|||
T Consensus 74 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH-- 146 (295)
T cd05097 74 LKNPNIIRLLGVCVS-----DDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA-- 146 (295)
T ss_pred CCCCCcCeEEEEEcC-----CCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHH--
Confidence 569999999998643 5678999999999999998854321 0123678899999999999999999
Q ss_pred CCCCeeeccccCCceeeCCCCceEecccccccccCCcC--------CCccccccccccCCCCcCccccchhHHHHHHHHH
Q 042634 251 CETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT--------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETF 322 (427)
Q Consensus 251 ~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~--------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell 322 (427)
+.|++||||||+||+++.++.+||+|||+++...... .++..|+|||++....++.++|||||||++|||+
T Consensus 147 -~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~ 225 (295)
T cd05097 147 -SLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMF 225 (295)
T ss_pred -hcCeeccccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHH
Confidence 8999999999999999999999999999997653221 3356899999998888999999999999999999
Q ss_pred h--CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCC
Q 042634 323 T--GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSEL 400 (427)
Q Consensus 323 ~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~d 400 (427)
+ |..||..... ............. ...... ...+..++..+.+++++||+.|
T Consensus 226 ~~~~~~p~~~~~~--~~~~~~~~~~~~~----~~~~~~--------------------~~~~~~~~~~l~~li~~~l~~~ 279 (295)
T cd05097 226 TLCKEQPYSLLSD--EQVIENTGEFFRN----QGRQIY--------------------LSQTPLCPSPVFKLMMRCWSRD 279 (295)
T ss_pred HcCCCCCCcccCh--HHHHHHHHHhhhh----cccccc--------------------CCCCCCCCHHHHHHHHHHcCCC
Confidence 8 5667764311 1111111110000 000000 0011123567999999999999
Q ss_pred CCCCCCHHHHHHHHH
Q 042634 401 PRERMNMEEVAAQLL 415 (427)
Q Consensus 401 P~~Rpt~~ev~~~L~ 415 (427)
|++|||+++|++.|+
T Consensus 280 p~~RPs~~~i~~~l~ 294 (295)
T cd05097 280 IKDRPTFNKIHHFLR 294 (295)
T ss_pred chhCcCHHHHHHHHh
Confidence 999999999999886
No 195
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.97 E-value=1.6e-32 Score=266.99 Aligned_cols=141 Identities=21% Similarity=0.301 Sum_probs=124.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++|+|.+++... ..+++..++.++.|++.||+||| ..||+||
T Consensus 58 l~h~~iv~l~~~~~~-----~~~~~lv~E~~~gg~L~~~l~~~----~~~~e~~~~~~~~qi~~aL~~LH---~~givHr 125 (381)
T cd05626 58 ADNEWVVKLYYSFQD-----KDNLYFVMDYIPGGDMMSLLIRM----EVFPEVLARFYIAELTLAIESVH---KMGFIHR 125 (381)
T ss_pred cCCCCeeeeEEEEec-----CCEEEEEEecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeec
Confidence 579999999988543 56789999999999999998654 34889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccC-----------------------------------------------------
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLP----------------------------------------------------- 285 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~----------------------------------------------------- 285 (427)
||||+|||++.++++||+|||+++...
T Consensus 126 DlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (381)
T cd05626 126 DIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLA 205 (381)
T ss_pred CCcHHHEEECCCCCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhcccccccccccc
Confidence 999999999999999999999975321
Q ss_pred CcCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 286 EATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 286 ~~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
....||..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 206 ~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~ 251 (381)
T cd05626 206 HSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAP 251 (381)
T ss_pred ccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCC
Confidence 0125888999999999989999999999999999999999999753
No 196
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.97 E-value=2e-32 Score=264.25 Aligned_cols=223 Identities=18% Similarity=0.206 Sum_probs=150.2
Q ss_pred cccccchhhhccccccC-CCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 179 IRHRNLVKIITSCASVD-FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~-~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
++||||+++++.+.... +......++||||+. +++.+.+. ..+++..+..++.|++.||+||| ++||+|
T Consensus 77 l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH 146 (359)
T cd07876 77 VNHKNIISLLNVFTPQKSLEEFQDVYLVMELMD-ANLCQVIH------MELDHERMSYLLYQMLCGIKHLH---SAGIIH 146 (359)
T ss_pred CCCCCEeeeeeeeccCCCccccceeEEEEeCCC-cCHHHHHh------ccCCHHHHHHHHHHHHHHHHHHH---hCCccc
Confidence 57999999998764321 112235689999995 56665553 23788889999999999999999 899999
Q ss_pred ccccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
|||||+||+++.++.+||+|||+++..... ..++..|+|||++.+..++.++||||+||++|||++|+.||.+..
T Consensus 147 rDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~ 226 (359)
T cd07876 147 RDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTD 226 (359)
T ss_pred CCCCHHHEEECCCCCEEEecCCCccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999999999865332 267889999999999999999999999999999999999997542
Q ss_pred CCCccHHHHHHHhcccchhcccCcc-------ccccccccchhhhcccccc---ccccchHHHHHHHHHHHhhcCCCCCC
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPV-------LLVEREEGETSKANAHKQF---TRSFSVKECLVSVLGIGVTCSSELPR 402 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~cl~~dP~ 402 (427)
. ...+.........+ ..+..+.. ..................+ .........+.++.+++.+||+.||+
T Consensus 227 ~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~ 304 (359)
T cd07876 227 H-IDQWNKVIEQLGTP-SAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPD 304 (359)
T ss_pred H-HHHHHHHHHhcCCC-cHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcc
Confidence 1 11111111111000 00000000 0000000000000000000 00001122346688999999999999
Q ss_pred CCCCHHHHHHH
Q 042634 403 ERMNMEEVAAQ 413 (427)
Q Consensus 403 ~Rpt~~ev~~~ 413 (427)
+|||++|++++
T Consensus 305 ~R~t~~e~l~h 315 (359)
T cd07876 305 KRISVDEALRH 315 (359)
T ss_pred cCCCHHHHhcC
Confidence 99999999875
No 197
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=2e-32 Score=269.77 Aligned_cols=139 Identities=25% Similarity=0.375 Sum_probs=121.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||||++++.+.. +...++|||++ .++|.+++.... ..+++.+++.++.|++.||.||| +.||+||
T Consensus 217 L~HpnIv~l~~~~~~-----~~~~~lv~e~~-~~~L~~~l~~~~---~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHr 284 (461)
T PHA03211 217 LSHPAVLALLDVRVV-----GGLTCLVLPKY-RSDLYTYLGARL---RPLGLAQVTAVARQLLSAIDYIH---GEGIIHR 284 (461)
T ss_pred CCCCCCCcEEEEEEE-----CCEEEEEEEcc-CCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCEEEC
Confidence 579999999987543 45789999999 578888875432 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~ 329 (427)
||||+|||++.++.+||+|||+++..... ..||..|+|||++.+..++.++|||||||++|||++|..|+.
T Consensus 285 DLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf 363 (461)
T PHA03211 285 DIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLF 363 (461)
T ss_pred cCCHHHEEECCCCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcc
Confidence 99999999999999999999999865322 258999999999999999999999999999999999887653
No 198
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.97 E-value=1.7e-32 Score=265.33 Aligned_cols=224 Identities=17% Similarity=0.198 Sum_probs=152.0
Q ss_pred cccccchhhhccccccC-CCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 179 IRHRNLVKIITSCASVD-FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~-~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
++||||+++++.+.... +......++||||++ ++|.+++. ..+++..+..++.|++.||+||| ++||+|
T Consensus 80 l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH 149 (364)
T cd07875 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQ------MELDHERMSYLLYQMLCGIKHLH---SAGIIH 149 (364)
T ss_pred cCCCCccccceeecccccccccCeEEEEEeCCC-CCHHHHHH------hcCCHHHHHHHHHHHHHHHHHHh---hCCeec
Confidence 67999999998754322 122345799999995 56766663 23788889999999999999999 899999
Q ss_pred ccccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
|||||+||+++.++.+||+|||+++..... ..++..|+|||++.+..++.++|||||||++|||++|+.||.+..
T Consensus 150 ~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 229 (364)
T cd07875 150 RDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 229 (364)
T ss_pred CCCCHHHEEECCCCcEEEEeCCCccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999999999865432 267889999999999999999999999999999999999997532
Q ss_pred CCCccHHHHHHHhcc--cchhcccCccccccccccchhh-hcccccc------ccccchHHHHHHHHHHHhhcCCCCCCC
Q 042634 333 TGNLTLHNFVKEALP--ERLAEIVDPVLLVEREEGETSK-ANAHKQF------TRSFSVKECLVSVLGIGVTCSSELPRE 403 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~~~~~~~~l~~~cl~~dP~~ 403 (427)
. ...+...+..... +.....+.+............. ......+ ...........++.+++.+|++.||.+
T Consensus 230 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~ 308 (364)
T cd07875 230 H-IDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASK 308 (364)
T ss_pred H-HHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCccc
Confidence 1 1111111111000 0011111100000000000000 0000000 000011123456889999999999999
Q ss_pred CCCHHHHHHH
Q 042634 404 RMNMEEVAAQ 413 (427)
Q Consensus 404 Rpt~~ev~~~ 413 (427)
|||++|++++
T Consensus 309 R~t~~e~L~h 318 (364)
T cd07875 309 RISVDEALQH 318 (364)
T ss_pred CCCHHHHhcC
Confidence 9999999874
No 199
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.97 E-value=1.2e-32 Score=266.34 Aligned_cols=192 Identities=18% Similarity=0.250 Sum_probs=149.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. +...++||||+++|+|.+++... ..+++..++.++.|++.||+||| +.||+||
T Consensus 58 l~h~~iv~~~~~~~~-----~~~~~lv~E~~~~g~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~lH---~~~ivH~ 125 (364)
T cd05599 58 ADNPWVVKLYYSFQD-----ENYLYLIMEYLPGGDMMTLLMKK----DTFTEEETRFYIAETILAIDSIH---KLGYIHR 125 (364)
T ss_pred CCCCCCcceEEEEEc-----CCeEEEEECCCCCcHHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEec
Confidence 459999999988543 67889999999999999998654 34899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc--------------------------------------------CCCcccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA--------------------------------------------TNNFFNF 294 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~--------------------------------------------~~~~~~y 294 (427)
||||+|||++.++.+||+|||+++..... ..||+.|
T Consensus 126 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y 205 (364)
T cd05599 126 DIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDY 205 (364)
T ss_pred cCCHHHeEECCCCCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccc
Confidence 99999999999999999999998754211 2488999
Q ss_pred ccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhcccc
Q 042634 295 QIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHK 374 (427)
Q Consensus 295 ~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (427)
+|||++....++.++|||||||++|||++|..||..... .+........ .....
T Consensus 206 ~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~-----~~~~~~i~~~------~~~~~--------------- 259 (364)
T cd05599 206 IAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNP-----QETYRKIINW------KETLQ--------------- 259 (364)
T ss_pred cCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCH-----HHHHHHHHcC------CCccC---------------
Confidence 999999999999999999999999999999999975321 1111110000 00000
Q ss_pred ccccccchHHHHHHHHHHHhhcCCCCCCCCCC---HHHHHHH
Q 042634 375 QFTRSFSVKECLVSVLGIGVTCSSELPRERMN---MEEVAAQ 413 (427)
Q Consensus 375 ~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt---~~ev~~~ 413 (427)
+. .....+.++.+++.+|+. +|.+|++ ++|++++
T Consensus 260 -~~---~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 260 -FP---DEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred -CC---CCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 00 000124567889999996 9999998 8888763
No 200
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.97 E-value=9.6e-33 Score=268.25 Aligned_cols=140 Identities=21% Similarity=0.274 Sum_probs=124.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+. ++...++||||+++|+|.+++... ..+++..++.++.|++.||+||| +.||+||
T Consensus 58 l~hp~iv~~~~~~~-----~~~~~~lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~ql~~aL~~LH---~~givHr 125 (377)
T cd05629 58 SDSPWVVSLYYSFQ-----DAQYLYLIMEFLPGGDLMTMLIKY----DTFSEDVTRFYMAECVLAIEAVH---KLGFIHR 125 (377)
T ss_pred CCCCCcceEEEEEE-----cCCeeEEEEeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecc
Confidence 57999999998854 366789999999999999998654 45889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC----------------------------------------------------
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE---------------------------------------------------- 286 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~---------------------------------------------------- 286 (427)
||||+|||++.++.+||+|||+|+....
T Consensus 126 Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (377)
T cd05629 126 DIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMA 205 (377)
T ss_pred CCCHHHEEECCCCCEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccc
Confidence 9999999999999999999999863210
Q ss_pred -cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 287 -ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 287 -~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
...||+.|+|||++.+..++.++|||||||++|||++|..||..
T Consensus 206 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~ 250 (377)
T cd05629 206 YSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCS 250 (377)
T ss_pred cccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCC
Confidence 12588899999999999999999999999999999999999965
No 201
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.97 E-value=1.3e-32 Score=266.06 Aligned_cols=192 Identities=20% Similarity=0.239 Sum_probs=147.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+. .+...++||||+++|+|.+++... .+++..+..++.||+.||+||| +.||+||
T Consensus 100 ~~hp~iv~~~~~~~-----~~~~~~lv~Ey~~gg~L~~~l~~~-----~~~~~~~~~~~~qil~aL~~LH---~~~IvHr 166 (370)
T cd05621 100 ANSPWVVQLFCAFQ-----DDKYLYMVMEYMPGGDLVNLMSNY-----DVPEKWAKFYTAEVVLALDAIH---SMGLIHR 166 (370)
T ss_pred CCCCCEeeEEEEEE-----cCCEEEEEEcCCCCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHH---HCCeEec
Confidence 67999999998743 366789999999999999988543 3788999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-------CCCccccccccccCCCC----cCccccchhHHHHHHHHHhCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-------TNNFFNFQIAEYGMGSE----VSTSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-------~~~~~~y~aPE~~~~~~----~~~~~DiwS~G~vl~ell~g~~p 327 (427)
||||+|||++.++.+||+|||+|+..... ..||..|+|||++.+.. ++.++||||+||++|||++|+.|
T Consensus 167 DLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~P 246 (370)
T cd05621 167 DVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 246 (370)
T ss_pred CCCHHHEEECCCCCEEEEecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCC
Confidence 99999999999999999999999865322 25899999999987643 78899999999999999999999
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCC--CC
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRE--RM 405 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~--Rp 405 (427)
|..... ...... +.+..... .+. .....+..+.+++.+|+..+|.+ |+
T Consensus 247 f~~~~~-----~~~~~~--------i~~~~~~~--------------~~p---~~~~~s~~~~~li~~~L~~~~~r~~R~ 296 (370)
T cd05621 247 FYADSL-----VGTYSK--------IMDHKNSL--------------NFP---EDVEISKHAKNLICAFLTDREVRLGRN 296 (370)
T ss_pred CCCCCH-----HHHHHH--------HHhCCccc--------------CCC---CcccCCHHHHHHHHHHccCchhccCCC
Confidence 975311 111111 11000000 000 01123455778899999855543 89
Q ss_pred CHHHHHHH
Q 042634 406 NMEEVAAQ 413 (427)
Q Consensus 406 t~~ev~~~ 413 (427)
|++|++++
T Consensus 297 ~~~e~l~h 304 (370)
T cd05621 297 GVEEIKQH 304 (370)
T ss_pred CHHHHhcC
Confidence 99999875
No 202
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.97 E-value=8e-33 Score=254.12 Aligned_cols=192 Identities=20% Similarity=0.244 Sum_probs=153.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++.+.+. .+...+++|||+++|+|.+++..... ..+++..++.++.|++.||.||| +.||+|+
T Consensus 55 l~h~~i~~~~~~~~-----~~~~~~lv~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~ 124 (255)
T cd08219 55 MKHPNIVAFKESFE-----ADGHLYIVMEYCDGGDLMQKIKLQRG--KLFPEDTILQWFVQMCLGVQHIH---EKRVLHR 124 (255)
T ss_pred CCCCCcceEEEEEE-----ECCEEEEEEeeCCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHh---hCCcccC
Confidence 57999999998753 35678999999999999988764322 45789999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||++++++.++++|||.++..... ..++..|+|||++.+..++.++||||||+++|+|++|..||....
T Consensus 125 dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~ 204 (255)
T cd08219 125 DIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANS 204 (255)
T ss_pred CCCcceEEECCCCcEEEcccCcceeecccccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCC
Confidence 99999999999999999999999865432 257788999999988889999999999999999999999996421
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
.............. ..+...+..+.+++.+||+.||++|||+.|++.
T Consensus 205 -----~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 251 (255)
T cd08219 205 -----WKNLILKVCQGSYK----------------------------PLPSHYSYELRSLIKQMFKRNPRSRPSATTILS 251 (255)
T ss_pred -----HHHHHHHHhcCCCC----------------------------CCCcccCHHHHHHHHHHHhCCcccCCCHHHHhh
Confidence 11111111000000 011223456889999999999999999999986
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
.
T Consensus 252 ~ 252 (255)
T cd08219 252 R 252 (255)
T ss_pred c
Confidence 4
No 203
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.97 E-value=1.2e-32 Score=254.75 Aligned_cols=195 Identities=19% Similarity=0.237 Sum_probs=149.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. +...++||||+++++|.+++... ..+++..+..++.|++.|++||| +.||+||
T Consensus 63 ~~h~~ii~~~~~~~~-----~~~~~iv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~ 130 (267)
T cd06646 63 CKHCNIVAYFGSYLS-----REKLWICMEYCGGGSLQDIYHVT----GPLSELQIAYVCRETLQGLAYLH---SKGKMHR 130 (267)
T ss_pred cCCCCeeeeeEEEEe-----CCEEEEEEeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccc
Confidence 579999999988543 46789999999999999988644 35889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccC---CCCcCccccchhHHHHHHHHHhCCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGM---GSEVSTSGDVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~---~~~~~~~~DiwS~G~vl~ell~g~~pf~ 329 (427)
||||+||+++.++.+||+|||+++..... ..++..|+|||.+. ...++.++|||||||++|||++|+.||.
T Consensus 131 dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~ 210 (267)
T cd06646 131 DIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMF 210 (267)
T ss_pred CCCHHHEEECCCCCEEECcCccceeecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCcc
Confidence 99999999999999999999999865322 25677899999874 3457889999999999999999999986
Q ss_pred cccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 330 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
....... . ............ .......+.++.+++.+||+.+|++|||+++
T Consensus 211 ~~~~~~~-~------------~~~~~~~~~~~~----------------~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~ 261 (267)
T cd06646 211 DLHPMRA-L------------FLMSKSNFQPPK----------------LKDKTKWSSTFHNFVKISLTKNPKKRPTAER 261 (267)
T ss_pred ccchhhh-h------------eeeecCCCCCCC----------------CccccccCHHHHHHHHHHhhCChhhCcCHHH
Confidence 4311100 0 000000000000 0001123457889999999999999999999
Q ss_pred HHHHH
Q 042634 410 VAAQL 414 (427)
Q Consensus 410 v~~~L 414 (427)
+++.+
T Consensus 262 il~~l 266 (267)
T cd06646 262 LLTHL 266 (267)
T ss_pred HhcCC
Confidence 98754
No 204
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.97 E-value=3.9e-32 Score=249.43 Aligned_cols=194 Identities=25% Similarity=0.423 Sum_probs=153.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. ...+++|||+++++|.+++..... ..+++..+..++.|++.|+.||| +.|++||
T Consensus 56 ~~~~~i~~~~~~~~~------~~~~~v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~al~~lH---~~~~~H~ 124 (254)
T cd05083 56 LHHKNLVRLLGVILH------NGLYIVMELMSKGNLVNFLRTRGR--ALVSVIQLLQFSLDVAEGMEYLE---SKKLVHR 124 (254)
T ss_pred CCCCCcCeEEEEEcC------CCcEEEEECCCCCCHHHHHHhcCc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeecc
Confidence 579999999887532 246899999999999999865432 35789999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC---CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCcccCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT---NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNEMFTG 334 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~---~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~~~~~ 334 (427)
||||+||+++.++.+||+|||.++...... ..+..|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 125 dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~- 203 (254)
T cd05083 125 DLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL- 203 (254)
T ss_pred ccCcceEEEcCCCcEEECCCccceeccccCCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH-
Confidence 999999999999999999999998654322 34467999999988889999999999999999998 9999865311
Q ss_pred CccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 042634 335 NLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQL 414 (427)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~L 414 (427)
....... ..... ...+..++.++.+++.+||+.+|++|||++++++.|
T Consensus 204 ----~~~~~~~---------~~~~~-------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l 251 (254)
T cd05083 204 ----KEVKECV---------EKGYR-------------------MEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKL 251 (254)
T ss_pred ----HHHHHHH---------hCCCC-------------------CCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 1111100 00000 001123456788999999999999999999999988
Q ss_pred HH
Q 042634 415 LS 416 (427)
Q Consensus 415 ~~ 416 (427)
++
T Consensus 252 ~~ 253 (254)
T cd05083 252 EK 253 (254)
T ss_pred cc
Confidence 63
No 205
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.97 E-value=2.7e-32 Score=255.31 Aligned_cols=198 Identities=21% Similarity=0.351 Sum_probs=153.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh------hhhccCHHHHHHHHHHHHHHHHHHhhcCC
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE------ALKNLNLLQRLSIAVDVASALDYLHHYCE 252 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------~~~~l~~~~~~~~~~~i~~~L~~LH~~~~ 252 (427)
++||||+++++.+.. +...++||||+++|+|.+++..... .....+...+..++.|++.||.||| +
T Consensus 66 l~~~~i~~~~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~ 137 (288)
T cd05061 66 FTCHHVVRLLGVVSK-----GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---A 137 (288)
T ss_pred CCCCCeeeEEEEEcC-----CCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH---h
Confidence 579999999987543 4578999999999999999864221 0123466788999999999999999 8
Q ss_pred CCeeeccccCCceeeCCCCceEecccccccccCCcC--------CCccccccccccCCCCcCccccchhHHHHHHHHHh-
Q 042634 253 TPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT--------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT- 323 (427)
Q Consensus 253 ~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~--------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~- 323 (427)
++|+||||||+||++++++.+||+|||+++...... .++..|+|||.+.+..++.++|||||||++||+++
T Consensus 138 ~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~ 217 (288)
T cd05061 138 KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSL 217 (288)
T ss_pred CCCcCCCCChheEEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999998543211 34567999999998889999999999999999998
Q ss_pred CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCC
Q 042634 324 GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRE 403 (427)
Q Consensus 324 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~ 403 (427)
|..||.+... .+.......... . ..+..++..+.+++.+||+.||++
T Consensus 218 ~~~p~~~~~~-----~~~~~~~~~~~~---~-------------------------~~~~~~~~~~~~li~~~l~~~p~~ 264 (288)
T cd05061 218 AEQPYQGLSN-----EQVLKFVMDGGY---L-------------------------DQPDNCPERVTDLMRMCWQFNPKM 264 (288)
T ss_pred CCCCCCCCCH-----HHHHHHHHcCCC---C-------------------------CCCCCCCHHHHHHHHHHcCCChhH
Confidence 7888865311 111111000000 0 011223567999999999999999
Q ss_pred CCCHHHHHHHHHHH
Q 042634 404 RMNMEEVAAQLLSF 417 (427)
Q Consensus 404 Rpt~~ev~~~L~~~ 417 (427)
|||+.|+++.|++.
T Consensus 265 Rps~~~ll~~l~~~ 278 (288)
T cd05061 265 RPTFLEIVNLLKDD 278 (288)
T ss_pred CcCHHHHHHHHHhh
Confidence 99999999888765
No 206
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.97 E-value=2.1e-32 Score=260.25 Aligned_cols=182 Identities=20% Similarity=0.252 Sum_probs=144.3
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecc
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrD 259 (427)
+|++++++.+.+. .....++||||+++|+|.+++... ..+++.+++.++.|++.||+||| +.||+|||
T Consensus 59 ~~~~i~~~~~~~~-----~~~~~~lv~Ey~~~g~L~~~i~~~----~~l~~~~~~~i~~qi~~al~~lH---~~~ivHrD 126 (323)
T cd05615 59 KPPFLTQLHSCFQ-----TVDRLYFVMEYVNGGDLMYHIQQV----GKFKEPQAVFYAAEISVGLFFLH---RRGIIYRD 126 (323)
T ss_pred CCCchhheeeEEe-----cCCEEEEEEcCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccC
Confidence 5677777777643 356789999999999999888654 35899999999999999999999 89999999
Q ss_pred ccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 260 LKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 260 lkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
|||+||+++.++.+||+|||+++.... ...|+..|+|||++.+..++.++||||+||++|||++|+.||.....
T Consensus 127 ikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~ 206 (323)
T cd05615 127 LKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE 206 (323)
T ss_pred CCHHHeEECCCCCEEEeccccccccCCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH
Confidence 999999999999999999999875422 12588999999999998999999999999999999999999975311
Q ss_pred CCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 334 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
............ ..+...+.++.+++.+||+.+|.+|++.
T Consensus 207 -----~~~~~~i~~~~~-----------------------------~~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 207 -----DELFQSIMEHNV-----------------------------SYPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred -----HHHHHHHHhCCC-----------------------------CCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 111111110000 0111234567899999999999999985
No 207
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.97 E-value=1.8e-32 Score=256.55 Aligned_cols=197 Identities=26% Similarity=0.441 Sum_probs=153.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh------------------hhhccCHHHHHHHHHHH
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE------------------ALKNLNLLQRLSIAVDV 240 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------------------~~~~l~~~~~~~~~~~i 240 (427)
++|||++++++.+.. +...+++|||+++|+|.+++..... ....+++..++.++.|+
T Consensus 65 l~h~~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i 139 (288)
T cd05050 65 FDHPNIVKLLGVCAV-----GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQV 139 (288)
T ss_pred cCCCchheEEEEEcC-----CCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHH
Confidence 469999999987543 4568999999999999998863211 11347888999999999
Q ss_pred HHHHHHHhhcCCCCeeeccccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCCCCcCccccch
Q 042634 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVY 312 (427)
Q Consensus 241 ~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~Diw 312 (427)
+.||.||| ..+++||||||+||++++++.+||+|||.++..... ...+..|+|||...+..++.++|||
T Consensus 140 ~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~ 216 (288)
T cd05050 140 AAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVW 216 (288)
T ss_pred HHHHHHHH---hCCeecccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHH
Confidence 99999999 899999999999999999999999999998764322 1345579999999888999999999
Q ss_pred hHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHH
Q 042634 313 SFGILLLETFT-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLG 391 (427)
Q Consensus 313 S~G~vl~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (427)
||||++|||++ |..||.+... .+........... ..+..++.++.+
T Consensus 217 slG~il~el~~~~~~p~~~~~~-----~~~~~~~~~~~~~----------------------------~~~~~~~~~l~~ 263 (288)
T cd05050 217 AYGVVLWEIFSYGMQPYYGMAH-----EEVIYYVRDGNVL----------------------------SCPDNCPLELYN 263 (288)
T ss_pred HHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHhcCCCC----------------------------CCCCCCCHHHHH
Confidence 99999999997 8888864311 1111111000000 011234567899
Q ss_pred HHhhcCCCCCCCCCCHHHHHHHHHH
Q 042634 392 IGVTCSSELPRERMNMEEVAAQLLS 416 (427)
Q Consensus 392 l~~~cl~~dP~~Rpt~~ev~~~L~~ 416 (427)
++.+||+.+|++|||++|+++.|++
T Consensus 264 li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 264 LMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred HHHHHcccCcccCCCHHHHHHHhhC
Confidence 9999999999999999999999873
No 208
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.97 E-value=2.4e-32 Score=256.00 Aligned_cols=201 Identities=20% Similarity=0.163 Sum_probs=152.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+|||++++++.+...+.......++||||+++++|.++++........+++..++.++.|++.||+||| +.|++||
T Consensus 76 ~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~ 152 (291)
T cd06639 76 PNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLH---NNRIIHR 152 (291)
T ss_pred cCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecc
Confidence 3699999999987654333345689999999999999988643222246899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCCC-----CcCccccchhHHHHHHHHHhCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGS-----EVSTSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~-----~~~~~~DiwS~G~vl~ell~g~~p 327 (427)
||||+||+++.++.+||+|||.++.... ...++..|+|||.+... .++.++|||||||++|||++|+.|
T Consensus 153 dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p 232 (291)
T cd06639 153 DVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPP 232 (291)
T ss_pred CCCHHHEEEcCCCCEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCC
Confidence 9999999999999999999999886532 22567889999997543 368899999999999999999999
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
|...... ... ............ .+......+.+++.+||+.+|++|||+
T Consensus 233 ~~~~~~~----~~~-~~~~~~~~~~~~--------------------------~~~~~~~~l~~li~~~l~~~p~~Rps~ 281 (291)
T cd06639 233 LFDMHPV----KTL-FKIPRNPPPTLL--------------------------HPEKWCRSFNHFISQCLIKDFEARPSV 281 (291)
T ss_pred CCCCcHH----HHH-HHHhcCCCCCCC--------------------------cccccCHHHHHHHHHHhhcChhhCcCH
Confidence 8753211 110 000000000000 112234568999999999999999999
Q ss_pred HHHHHH
Q 042634 408 EEVAAQ 413 (427)
Q Consensus 408 ~ev~~~ 413 (427)
.|++++
T Consensus 282 ~~il~~ 287 (291)
T cd06639 282 THLLEH 287 (291)
T ss_pred HHHhcC
Confidence 999863
No 209
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.97 E-value=3.9e-32 Score=251.39 Aligned_cols=191 Identities=23% Similarity=0.313 Sum_probs=154.2
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecc
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrD 259 (427)
+|||++++++.+.. +...++||||+++++|.+++... ..+++..+..++.|+++||+||| +.|++|||
T Consensus 67 ~h~~iv~~~~~~~~-----~~~~~iv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~d 134 (267)
T PHA03390 67 DNPNFIKLYYSVTT-----LKGHVLIMDYIKDGDLFDLLKKE----GKLSEAEVKKIIRQLVEALNDLH---KHNIIHND 134 (267)
T ss_pred cCCCEEEEEEEEec-----CCeeEEEEEcCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCC
Confidence 69999999988544 45789999999999999998654 25899999999999999999999 89999999
Q ss_pred ccCCceeeCCCC-ceEecccccccccCCcC--CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCCCc
Q 042634 260 LKPSNVLLDGEL-TAHVGDFGLAKFLPEAT--NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNL 336 (427)
Q Consensus 260 lkp~NIll~~~~-~~kL~DFG~a~~~~~~~--~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~~~ 336 (427)
|||+||+++.++ .++|+|||.++...... .++..|+|||++.+..++.++||||+||++|||++|+.||........
T Consensus 135 l~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~ 214 (267)
T PHA03390 135 IKLENVLYDRAKDRIYLCDYGLCKIIGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEEL 214 (267)
T ss_pred CCHHHEEEeCCCCeEEEecCccceecCCCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchh
Confidence 999999999988 99999999998765433 678899999999988999999999999999999999999975433222
Q ss_pred cHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC-HHHHHH
Q 042634 337 TLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN-MEEVAA 412 (427)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt-~~ev~~ 412 (427)
....+.... ... ....+..+..+.+++.+||+.+|.+||+ ++|+++
T Consensus 215 ~~~~~~~~~-~~~-----------------------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 215 DLESLLKRQ-QKK-----------------------------LPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred hHHHHHHhh-ccc-----------------------------CCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 222211111 000 0011235567899999999999999996 688875
No 210
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.97 E-value=2.9e-32 Score=253.88 Aligned_cols=198 Identities=22% Similarity=0.374 Sum_probs=158.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. ...++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.|++||
T Consensus 66 l~h~~i~~~~~~~~~------~~~~~v~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~ 133 (279)
T cd05057 66 VDHPHVVRLLGICLS------SQVQLITQLMPLGCLLDYVRNHK---DNIGSQYLLNWCVQIAKGMSYLE---EKRLVHR 133 (279)
T ss_pred CCCCCcceEEEEEec------CceEEEEecCCCCcHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---hCCEEec
Confidence 479999999988643 46789999999999999987643 34899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC--------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT--------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~--------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~ 329 (427)
||||+||+++.++.+||+|||.++...... .++..|+|||.+....++.++|||||||++||+++ |+.||.
T Consensus 134 di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~ 213 (279)
T cd05057 134 DLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYE 213 (279)
T ss_pred ccCcceEEEcCCCeEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCC
Confidence 999999999999999999999998654322 23457999999988889999999999999999998 999987
Q ss_pred cccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 330 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
.... ..+.+.+...... ..+..++..+.+++.+||..+|++|||+.+
T Consensus 214 ~~~~--~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~ 260 (279)
T cd05057 214 GIPA--VEIPDLLEKGERL-------------------------------PQPPICTIDVYMVLVKCWMIDAESRPTFKE 260 (279)
T ss_pred CCCH--HHHHHHHhCCCCC-------------------------------CCCCCCCHHHHHHHHHHcCCChhhCCCHHH
Confidence 5311 1111111110000 011123456889999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 042634 410 VAAQLLSFRNKL 421 (427)
Q Consensus 410 v~~~L~~~~~~~ 421 (427)
+++.|+++.++.
T Consensus 261 l~~~l~~~~~~~ 272 (279)
T cd05057 261 LINEFSKMARDP 272 (279)
T ss_pred HHHHHHHHHhCC
Confidence 999999986643
No 211
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=6.4e-33 Score=266.63 Aligned_cols=193 Identities=25% Similarity=0.368 Sum_probs=160.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||+|++||+... ....+|||+++.|+|.+.|++.. ...|.......++.|||.|+.||- .++.|||
T Consensus 168 L~H~hliRLyGvVl~------qp~mMV~ELaplGSLldrLrka~--~~~llv~~Lcdya~QiA~aM~YLe---skrlvHR 236 (1039)
T KOG0199|consen 168 LQHPHLIRLYGVVLD------QPAMMVFELAPLGSLLDRLRKAK--KAILLVSRLCDYAMQIAKAMQYLE---SKRLVHR 236 (1039)
T ss_pred ccCcceeEEeeeecc------chhhHHhhhcccchHHHHHhhcc--ccceeHHHHHHHHHHHHHHHHHHh---hhhhhhh
Confidence 689999999998543 56789999999999999998732 256888889999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC---------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT---------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPT 328 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~---------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf 328 (427)
||..+|+++.....+||+|||+.+.+..+. .-.+.|||||.+....++.++|||+|||++|||++ |..||
T Consensus 237 DLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW 316 (1039)
T KOG0199|consen 237 DLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPW 316 (1039)
T ss_pred hhhhhhheecccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCC
Confidence 999999999999999999999999886654 33457999999999999999999999999999998 89999
Q ss_pred CcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 329 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
.+.... .+.+.+|. ..+...++.|++.++++|.+||..+|++||||.
T Consensus 317 ~G~~g~--------------qIL~~iD~-------------------~erLpRPk~csedIY~imk~cWah~paDRptFs 363 (1039)
T KOG0199|consen 317 VGCRGI--------------QILKNIDA-------------------GERLPRPKYCSEDIYQIMKNCWAHNPADRPTFS 363 (1039)
T ss_pred CCCCHH--------------HHHHhccc-------------------cccCCCCCCChHHHHHHHHHhccCCccccccHH
Confidence 764211 11111221 011124667999999999999999999999999
Q ss_pred HHHHHHH
Q 042634 409 EVAAQLL 415 (427)
Q Consensus 409 ev~~~L~ 415 (427)
.|.+.+-
T Consensus 364 air~~~~ 370 (1039)
T KOG0199|consen 364 AIREDLV 370 (1039)
T ss_pred HHHHhHH
Confidence 9986554
No 212
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.97 E-value=2.8e-32 Score=257.89 Aligned_cols=218 Identities=18% Similarity=0.228 Sum_probs=150.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. +...++||||++ ++|.+++.... ..+++..+..++.|++.||+||| +.||+||
T Consensus 61 l~h~~iv~~~~~~~~-----~~~~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~ 128 (309)
T cd07872 61 LKHANIVTLHDIVHT-----DKSLTLVFEYLD-KDLKQYMDDCG---NIMSMHNVKIFLYQILRGLAYCH---RRKVLHR 128 (309)
T ss_pred CCCCCcceEEEEEee-----CCeEEEEEeCCC-CCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecC
Confidence 579999999998543 567899999995 58887775432 34788899999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||+||+++.++.+||+|||+++..... ..++..|+|||++.+ ..++.++||||+||++|||++|+.||.+.
T Consensus 129 dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~ 208 (309)
T cd07872 129 DLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGS 208 (309)
T ss_pred CCCHHHEEECCCCCEEECccccceecCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999999764321 256788999998865 56899999999999999999999999754
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
... ..+... .........+........................ .......+.++.+++.+|++.||++|||++|++
T Consensus 209 ~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l 284 (309)
T cd07872 209 TVE-DELHLI-FRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPL--INHAPRLDTEGIELLTKFLQYESKKRISAEEAM 284 (309)
T ss_pred ChH-HHHHHH-HHHhCCCCHHHHhhhcchhhhhhhhcCccCCCch--hhhccCCCHHHHHHHHHhccCChhhCCCHHHHh
Confidence 211 111111 1111110001000000000000000000000000 001122456788999999999999999999998
Q ss_pred H
Q 042634 412 A 412 (427)
Q Consensus 412 ~ 412 (427)
+
T Consensus 285 ~ 285 (309)
T cd07872 285 K 285 (309)
T ss_pred c
Confidence 7
No 213
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.97 E-value=4.4e-32 Score=253.04 Aligned_cols=211 Identities=27% Similarity=0.440 Sum_probs=158.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
+.|||++++++.+.. .++...+++|||+++++|.+++.... ..+++..+..++.|++.||+||| +.|++||
T Consensus 63 l~~~~i~~~~~~~~~---~~~~~~~lv~e~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~ 133 (284)
T cd05038 63 LDHENIVKYKGVCEK---PGGRSLRLIMEYLPSGSLRDYLQRHR---DQINLKRLLLFSSQICKGMDYLG---SQRYIHR 133 (284)
T ss_pred CCCCChheEEeeeec---CCCCceEEEEecCCCCCHHHHHHhCc---cccCHHHHHHHHHHHHHHHHHHH---hCCeecC
Confidence 469999999887533 22456899999999999999987643 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc---------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA---------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~---------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~ 329 (427)
||||+||+++.++.+||+|||.+...... ..++..|+|||...+..++.++|||||||++|||++|..||.
T Consensus 134 dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~ 213 (284)
T cd05038 134 DLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQ 213 (284)
T ss_pred CCCHHhEEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcc
Confidence 99999999999999999999999876522 133456999999988889999999999999999999999986
Q ss_pred cccCCCccHHHHHHH-hcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 330 EMFTGNLTLHNFVKE-ALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
........+...... .....+.+.+. ...+...+..++.++.+++.+||+.+|++||||.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ 274 (284)
T cd05038 214 SPPAEFLRMIGIAQGQMIVTRLLELLK-------------------EGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFA 274 (284)
T ss_pred cccchhccccccccccccHHHHHHHHH-------------------cCCcCCCCccCCHHHHHHHHHHhccChhhCCCHH
Confidence 532111100000000 00000000000 0000112234567899999999999999999999
Q ss_pred HHHHHHHHH
Q 042634 409 EVAAQLLSF 417 (427)
Q Consensus 409 ev~~~L~~~ 417 (427)
||+++|+.+
T Consensus 275 ei~~~l~~i 283 (284)
T cd05038 275 DLILIVDRL 283 (284)
T ss_pred HHHHHHhhc
Confidence 999999876
No 214
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.7e-32 Score=260.92 Aligned_cols=187 Identities=24% Similarity=0.278 Sum_probs=152.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+||||+++.+.+. ++...++|||.+.++-+.+.+...+ .+. ..+..|+.+|+.|+.||| ++|||||
T Consensus 373 ~~h~niv~~~~v~~-----~~~~~~~v~e~l~g~ell~ri~~~~----~~~-~e~~~w~~~lv~Av~~LH---~~gvvhR 439 (612)
T KOG0603|consen 373 RDHPNIVKSHDVYE-----DGKEIYLVMELLDGGELLRRIRSKP----EFC-SEASQWAAELVSAVDYLH---EQGVVHR 439 (612)
T ss_pred cCCCcceeecceec-----CCceeeeeehhccccHHHHHHHhcc----hhH-HHHHHHHHHHHHHHHHHH---hcCeeec
Confidence 57999999999844 4778999999999988777665442 133 678889999999999999 8999999
Q ss_pred cccCCceee-CCCCceEecccccccccCCc---CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCC
Q 042634 259 DLKPSNVLL-DGELTAHVGDFGLAKFLPEA---TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTG 334 (427)
Q Consensus 259 Dlkp~NIll-~~~~~~kL~DFG~a~~~~~~---~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~ 334 (427)
|+||+|||+ ++.++++|+|||.++..... .+-|..|.|||++...+|++++||||||++||+|++|+.||.....+
T Consensus 440 DLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~ 519 (612)
T KOG0603|consen 440 DLKPGNILLDGSAGHLRLTYFGFWSELERSCDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG 519 (612)
T ss_pred CCChhheeecCCCCcEEEEEechhhhCchhhcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch
Confidence 999999999 68999999999999988765 25677899999999999999999999999999999999999865333
Q ss_pred CccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 042634 335 NLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQ 413 (427)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~ 413 (427)
.+.......+.. ....++++.+|+.+||+.||.+||+|.|+...
T Consensus 520 ----~ei~~~i~~~~~-------------------------------s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 520 ----IEIHTRIQMPKF-------------------------------SECVSDEAKDLLQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred ----HHHHHhhcCCcc-------------------------------ccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence 111111111111 13345678999999999999999999998753
No 215
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.97 E-value=3.6e-32 Score=253.66 Aligned_cols=193 Identities=20% Similarity=0.253 Sum_probs=149.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. ....++|+||+++++|..++.... ..+++..+..++.|++.||+||| +.|++||
T Consensus 59 l~h~~ii~~~~~~~~-----~~~~~~v~e~~~~~~l~~~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH---~~~i~H~ 127 (282)
T cd06643 59 CDHPNIVKLLDAFYY-----ENNLWILIEFCAGGAVDAVMLELE---RPLTEPQIRVVCKQTLEALNYLH---ENKIIHR 127 (282)
T ss_pred CCCCCeeeEEEEEee-----CCEEEEEEEecCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeec
Confidence 579999999988543 457899999999999988775432 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC------cCCCccccccccccC-----CCCcCccccchhHHHHHHHHHhCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGM-----GSEVSTSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~-----~~~~~~~~DiwS~G~vl~ell~g~~p 327 (427)
||||+||+++.++.+||+|||++..... ...++..|+|||++. +..++.++|||||||++|||++|+.|
T Consensus 128 dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p 207 (282)
T cd06643 128 DLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPP 207 (282)
T ss_pred CCCcccEEEccCCCEEEccccccccccccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCC
Confidence 9999999999999999999999875432 226788999999974 34578899999999999999999999
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
|...... +.............. .+...+.++.+++.+||+.||++|||+
T Consensus 208 ~~~~~~~-----~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~ 256 (282)
T cd06643 208 HHELNPM-----RVLLKIAKSEPPTLA--------------------------QPSRWSSEFKDFLKKCLEKNVDARWTT 256 (282)
T ss_pred ccccCHH-----HHHHHHhhcCCCCCC--------------------------CccccCHHHHHHHHHHccCChhhCcCH
Confidence 8753211 111110000000000 112235568999999999999999999
Q ss_pred HHHHHH
Q 042634 408 EEVAAQ 413 (427)
Q Consensus 408 ~ev~~~ 413 (427)
+++++.
T Consensus 257 ~~il~~ 262 (282)
T cd06643 257 TQLLQH 262 (282)
T ss_pred HHHhcC
Confidence 998754
No 216
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.97 E-value=5.5e-32 Score=248.95 Aligned_cols=190 Identities=23% Similarity=0.369 Sum_probs=149.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. ...++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.||+||
T Consensus 58 l~h~~i~~~~~~~~~------~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~ 125 (259)
T cd05037 58 LSHKHLVKLYGVCVR------DENIMVEEYVKFGPLDVFLHREK---NNVSLHWKLDVAKQLASALHYLE---DKKLVHG 125 (259)
T ss_pred CCCcchhheeeEEec------CCcEEEEEcCCCCcHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHh---hCCeecc
Confidence 579999999987643 34689999999999999987643 25889999999999999999999 8999999
Q ss_pred cccCCceeeCCCC-------ceEecccccccccCCc--CCCccccccccccCCC--CcCccccchhHHHHHHHHHh-CCC
Q 042634 259 DLKPSNVLLDGEL-------TAHVGDFGLAKFLPEA--TNNFFNFQIAEYGMGS--EVSTSGDVYSFGILLLETFT-GKR 326 (427)
Q Consensus 259 Dlkp~NIll~~~~-------~~kL~DFG~a~~~~~~--~~~~~~y~aPE~~~~~--~~~~~~DiwS~G~vl~ell~-g~~ 326 (427)
||||+||+++.++ .+||+|||.+...... ..++..|+|||++.+. .++.++|||||||++||+++ |..
T Consensus 126 dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~ 205 (259)
T cd05037 126 NVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEE 205 (259)
T ss_pred cCccceEEEecCccccCCceeEEeCCCCcccccccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCC
Confidence 9999999999887 7999999999876542 3566789999998876 78999999999999999999 577
Q ss_pred CCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC
Q 042634 327 PTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN 406 (427)
Q Consensus 327 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt 406 (427)
||..... ......... . . .. + .+ ....+.+++.+||+.+|.+|||
T Consensus 206 p~~~~~~--~~~~~~~~~---~------~-~~-------------------~--~~--~~~~~~~li~~~l~~~p~~Rpt 250 (259)
T cd05037 206 PLSTLSS--SEKERFYQD---Q------H-RL-------------------P--MP--DCAELANLINQCWTYDPTKRPS 250 (259)
T ss_pred CcccCCc--hhHHHHHhc---C------C-CC-------------------C--CC--CchHHHHHHHHHhccChhhCCC
Confidence 7754321 111111000 0 0 00 0 00 0156889999999999999999
Q ss_pred HHHHHHHHH
Q 042634 407 MEEVAAQLL 415 (427)
Q Consensus 407 ~~ev~~~L~ 415 (427)
+.||++.|+
T Consensus 251 ~~~il~~l~ 259 (259)
T cd05037 251 FRAILRDLN 259 (259)
T ss_pred HHHHHHhcC
Confidence 999998873
No 217
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.97 E-value=7.7e-32 Score=255.42 Aligned_cols=220 Identities=20% Similarity=0.259 Sum_probs=154.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. +...+++|||+++|+|.+++..... ..+++..+..++.|++.||+||| +.+|+||
T Consensus 56 l~h~~i~~~~~~~~~-----~~~~~~~~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~LH---~~~ivH~ 125 (314)
T cd08216 56 LQHPNILPYVTSFIV-----DSELYVVSPLMAYGSCEDLLKTHFP--EGLPELAIAFILKDVLNALDYIH---SKGFIHR 125 (314)
T ss_pred cCCcchhhhhheeec-----CCeEEEEEeccCCCCHHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH---HCCeecC
Confidence 579999999987543 5678999999999999999875432 34888999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-------------CCCccccccccccCC--CCcCccccchhHHHHHHHHHh
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-------------TNNFFNFQIAEYGMG--SEVSTSGDVYSFGILLLETFT 323 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-------------~~~~~~y~aPE~~~~--~~~~~~~DiwS~G~vl~ell~ 323 (427)
||||+||+++.++.+||+|||.+...... ..++..|+|||++.. ..++.++|||||||++|||++
T Consensus 126 dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~ 205 (314)
T cd08216 126 SVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELAN 205 (314)
T ss_pred CCCcceEEEecCCceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHh
Confidence 99999999999999999999988654221 145668999999876 358899999999999999999
Q ss_pred CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccch-----hhhccccccccccchHHHHHHHHHHHhhcCC
Q 042634 324 GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGET-----SKANAHKQFTRSFSVKECLVSVLGIGVTCSS 398 (427)
Q Consensus 324 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~ 398 (427)
|+.||........ ..+......+ ..++............ ....................++.+++.+||+
T Consensus 206 g~~pf~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 280 (314)
T cd08216 206 GHVPFKDMPATQM-LLEKVRGTVP----CLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQ 280 (314)
T ss_pred CCCCCCCCCHHHH-HHHHHhccCc----cccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhh
Confidence 9999975321111 1111111111 1111000000000000 0000000001111223345678999999999
Q ss_pred CCCCCCCCHHHHHHH
Q 042634 399 ELPRERMNMEEVAAQ 413 (427)
Q Consensus 399 ~dP~~Rpt~~ev~~~ 413 (427)
.||++|||++|+++.
T Consensus 281 ~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 281 RDPESRPSASQLLNH 295 (314)
T ss_pred cCCCcCcCHHHHhcC
Confidence 999999999999874
No 218
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.97 E-value=3.5e-32 Score=257.03 Aligned_cols=222 Identities=20% Similarity=0.255 Sum_probs=155.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. +...++||||+++++|.+++... ..+++..+..++.|++.||.|||+ ..+++||
T Consensus 56 l~h~~iv~~~~~~~~-----~~~~~lv~ey~~~~~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~--~~~i~H~ 124 (308)
T cd06615 56 CNSPYIVGFYGAFYS-----DGEISICMEHMDGGSLDQVLKKA----GRIPENILGKISIAVLRGLTYLRE--KHKIMHR 124 (308)
T ss_pred CCCCCCCeEEEEEee-----CCEEEEEeeccCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHh--hCCEEEC
Confidence 579999999998643 56789999999999999998654 458899999999999999999993 2589999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTG 334 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~ 334 (427)
||||+||+++.++.+||+|||.+...... ..++..|+|||.+.+..++.++|||||||++||+++|+.||....
T Consensus 125 dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~-- 202 (308)
T cd06615 125 DVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPD-- 202 (308)
T ss_pred CCChHHEEEecCCcEEEccCCCcccccccccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcc--
Confidence 99999999999999999999998765432 257789999999988889999999999999999999999986432
Q ss_pred CccHHHHHHHhcccc-hhcccCcc-ccccccccchh--h--hccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 335 NLTLHNFVKEALPER-LAEIVDPV-LLVEREEGETS--K--ANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 335 ~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
............... ........ ........... . ........+.......+.++.+++.+||+.+|++|||++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~ 282 (308)
T cd06615 203 AKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLK 282 (308)
T ss_pred hhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHH
Confidence 111111111100000 00000000 00000000000 0 000000001111122456789999999999999999999
Q ss_pred HHHHH
Q 042634 409 EVAAQ 413 (427)
Q Consensus 409 ev~~~ 413 (427)
||++.
T Consensus 283 ~ll~~ 287 (308)
T cd06615 283 ELTKH 287 (308)
T ss_pred HHhcC
Confidence 99876
No 219
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.97 E-value=7e-32 Score=248.64 Aligned_cols=194 Identities=24% Similarity=0.407 Sum_probs=153.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++... ....+++|||+++++|.+++..... ..+++.++..++.|++.||+||| +.|++||
T Consensus 58 l~h~~i~~~~~~~~------~~~~~~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH---~~~i~H~ 126 (260)
T cd05067 58 LQHPRLVRLYAVVT------QEPIYIITEYMENGSLVDFLKTPEG--IKLTINKLIDMAAQIAEGMAFIE---RKNYIHR 126 (260)
T ss_pred cCCcCeeeEEEEEc------cCCcEEEEEcCCCCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHh---cCCeecc
Confidence 57999999987632 2457999999999999998865432 45889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC-------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT-------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~-------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~ 330 (427)
||||+||+++.++.++|+|||.+....... .++..|+|||++....++.++||||||+++||+++ |+.||.+
T Consensus 127 dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~ 206 (260)
T cd05067 127 DLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPG 206 (260)
T ss_pred cccHHhEEEcCCCCEEEccCcceeecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCC
Confidence 999999999999999999999998654221 34567999999988889999999999999999998 9999975
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
... ............. ..+...+.++.+++.+||+.+|++|||++++
T Consensus 207 ~~~--~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l 253 (260)
T cd05067 207 MTN--PEVIQNLERGYRM-------------------------------PRPDNCPEELYELMRLCWKEKPEERPTFEYL 253 (260)
T ss_pred CCh--HHHHHHHHcCCCC-------------------------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHH
Confidence 321 1111111000000 0112234578999999999999999999999
Q ss_pred HHHHHH
Q 042634 411 AAQLLS 416 (427)
Q Consensus 411 ~~~L~~ 416 (427)
+..|+.
T Consensus 254 ~~~l~~ 259 (260)
T cd05067 254 RSVLED 259 (260)
T ss_pred HHHhhc
Confidence 999875
No 220
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.97 E-value=2.1e-32 Score=266.36 Aligned_cols=141 Identities=20% Similarity=0.292 Sum_probs=123.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. +...++|||||++|+|.+++... ..+++..++.++.||+.||+||| +.||+||
T Consensus 58 ~~h~~iv~~~~~~~~-----~~~~~lv~E~~~gg~L~~~l~~~----~~~~e~~~~~~~~qi~~al~~lH---~~~ivHr 125 (382)
T cd05625 58 ADNEWVVRLYYSFQD-----KDNLYFVMDYIPGGDMMSLLIRM----GIFPEDLARFYIAELTCAVESVH---KMGFIHR 125 (382)
T ss_pred CCCCcCCeEEEEEEe-----CCEEEEEEeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecC
Confidence 579999999988543 56789999999999999988654 34889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccC-----------------------------------------------------
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLP----------------------------------------------------- 285 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~----------------------------------------------------- 285 (427)
||||+|||++.++.+||+|||+|+...
T Consensus 126 DlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (382)
T cd05625 126 DIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLA 205 (382)
T ss_pred CCCHHHEEECCCCCEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccc
Confidence 999999999999999999999975321
Q ss_pred CcCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 286 EATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 286 ~~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
....||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 206 ~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~ 251 (382)
T cd05625 206 HSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQ 251 (382)
T ss_pred cccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCC
Confidence 0125788999999999999999999999999999999999999753
No 221
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.97 E-value=4.3e-32 Score=252.78 Aligned_cols=192 Identities=19% Similarity=0.237 Sum_probs=150.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+||+++.+++.+.. ++..++||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||
T Consensus 54 ~~~~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~i~~~----~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~ 121 (279)
T cd05633 54 GDCPFIVCMTYAFHT-----PDKLCFILDLMNGGDLHYHLSQH----GVFSEKEMRFYATEIILGLEHMH---NRFVVYR 121 (279)
T ss_pred CCCCcEeEEEEEEec-----CCeEEEEEecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcCCC
Confidence 468999988877433 45789999999999999888654 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc----CCCccccccccccC-CCCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA----TNNFFNFQIAEYGM-GSEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~y~aPE~~~-~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
||||+||++++++.+||+|||++...... ..++..|+|||.+. +..++.++||||+||++|||++|..||.....
T Consensus 122 dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 201 (279)
T cd05633 122 DLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 201 (279)
T ss_pred CCCHHHEEECCCCCEEEccCCcceeccccCccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCC
Confidence 99999999999999999999998754322 26788999999986 45689999999999999999999999975322
Q ss_pred CCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC-----CHH
Q 042634 334 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM-----NME 408 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp-----t~~ 408 (427)
... .. ....... .. ...+...+.++.+++.+||..||++|| |++
T Consensus 202 ~~~--~~-~~~~~~~-----~~-----------------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ 250 (279)
T cd05633 202 KDK--HE-IDRMTLT-----VN-----------------------VELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQ 250 (279)
T ss_pred cCH--HH-HHHHhhc-----CC-----------------------cCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHH
Confidence 111 11 1100000 00 002233456789999999999999999 588
Q ss_pred HHHHH
Q 042634 409 EVAAQ 413 (427)
Q Consensus 409 ev~~~ 413 (427)
|++++
T Consensus 251 ~~~~h 255 (279)
T cd05633 251 EVKEH 255 (279)
T ss_pred HHHhC
Confidence 88774
No 222
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.97 E-value=4e-32 Score=253.79 Aligned_cols=195 Identities=23% Similarity=0.304 Sum_probs=152.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|++++.+++.+.. +...++||||+++++|.+++..... ..+++..+..++.|++.||.||| +.||+||
T Consensus 57 l~~~~i~~~~~~~~~-----~~~~~lv~e~~~g~~L~~~l~~~~~--~~l~~~~~~~~~~qi~~~l~~lH---~~~iiH~ 126 (285)
T cd05630 57 VNSRFVVSLAYAYET-----KDALCLVLTLMNGGDLKFHIYHMGE--AGFEEGRAVFYAAEICCGLEDLH---QERIVYR 126 (285)
T ss_pred CCCCCeeeeeEEEec-----CCEEEEEEEecCCCcHHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH---hCCEEeC
Confidence 578999999887543 5678999999999999988854322 45889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
||||+||+++.++.+||+|||++...... ..|+..|+|||++.+..++.++||||+||++|||++|+.||.....
T Consensus 127 dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~ 206 (285)
T cd05630 127 DLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKK 206 (285)
T ss_pred CCCHHHEEECCCCCEEEeeccceeecCCCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCc
Confidence 99999999999999999999999765432 2678899999999998999999999999999999999999975321
Q ss_pred CCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC-----HH
Q 042634 334 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN-----ME 408 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt-----~~ 408 (427)
.. .......... .... ..+..++.++.+++.+||+.||++||| ++
T Consensus 207 ~~--~~~~~~~~~~-~~~~---------------------------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ 256 (285)
T cd05630 207 KI--KREEVERLVK-EVQE---------------------------EYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAR 256 (285)
T ss_pred cc--hHHHHHhhhh-hhhh---------------------------hcCccCCHHHHHHHHHHhhcCHHHccCCCCCchH
Confidence 10 0000000000 0000 011223456789999999999999999 88
Q ss_pred HHHHH
Q 042634 409 EVAAQ 413 (427)
Q Consensus 409 ev~~~ 413 (427)
|++++
T Consensus 257 ~~~~h 261 (285)
T cd05630 257 EVKEH 261 (285)
T ss_pred HHHcC
Confidence 88873
No 223
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.97 E-value=1.4e-31 Score=248.92 Aligned_cols=189 Identities=21% Similarity=0.283 Sum_probs=152.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. +...++||||+++++|.+++.. ..+++..+..++.|++.|+.||| ..|++|+
T Consensus 59 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH---~~~ivH~ 125 (277)
T cd06642 59 CDSPYITRYYGSYLK-----GTKLWIIMEYLGGGSALDLLKP-----GPLEETYIATILREILKGLDYLH---SERKIHR 125 (277)
T ss_pred CCCCccHhhhccccc-----CCceEEEEEccCCCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHh---cCCeecc
Confidence 479999999998543 5678999999999999998864 34788999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC------CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||+|+||+++.++.+||+|||++....... .++..|+|||++.+..++.++|||||||++||+++|+.||....
T Consensus 126 dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~ 205 (277)
T cd06642 126 DIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLH 205 (277)
T ss_pred CCChheEEEeCCCCEEEccccccccccCcchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccc
Confidence 999999999999999999999998654332 46778999999999889999999999999999999999986432
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
... .........+. .....++.++.+++.+||+.+|++|||+.|+++
T Consensus 206 ~~~--~~~~~~~~~~~-------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 206 PMR--VLFLIPKNSPP-------------------------------TLEGQYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred hhh--HHhhhhcCCCC-------------------------------CCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 111 00000000000 011224566889999999999999999999998
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
+
T Consensus 253 ~ 253 (277)
T cd06642 253 H 253 (277)
T ss_pred h
Confidence 4
No 224
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=1.7e-32 Score=257.91 Aligned_cols=195 Identities=23% Similarity=0.295 Sum_probs=148.8
Q ss_pred CcccccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 042634 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255 (427)
Q Consensus 176 N~ll~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~i 255 (427)
+++.+|.+||+++++-.. +...|+||||- .-||.++|++... .++.-.++.+..|++.|+.++| .+||
T Consensus 414 ~KLkg~~~IIqL~DYEv~-----d~~lYmvmE~G-d~DL~kiL~k~~~---~~~~~~lk~ywkqML~aV~~IH---~~gI 481 (677)
T KOG0596|consen 414 NKLKGHDKIIQLYDYEVT-----DGYLYMVMECG-DIDLNKILKKKKS---IDPDWFLKFYWKQMLLAVKTIH---QHGI 481 (677)
T ss_pred HHhcCCceEEEEeeeecc-----CceEEEEeecc-cccHHHHHHhccC---CCchHHHHHHHHHHHHHHHHHH---Hhce
Confidence 344779999999997332 57899999965 7799999987643 2333488999999999999999 9999
Q ss_pred eeccccCCceeeCCCCceEecccccccccCCcC--------CCccccccccccCCCC-----------cCccccchhHHH
Q 042634 256 VHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT--------NNFFNFQIAEYGMGSE-----------VSTSGDVYSFGI 316 (427)
Q Consensus 256 vHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~--------~~~~~y~aPE~~~~~~-----------~~~~~DiwS~G~ 316 (427)
||.||||.|+|+-. |.+||+|||.|..+.... +||+.||+||.+.... ++.++||||+||
T Consensus 482 VHSDLKPANFLlVk-G~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGC 560 (677)
T KOG0596|consen 482 VHSDLKPANFLLVK-GRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGC 560 (677)
T ss_pred eecCCCcccEEEEe-eeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhh
Confidence 99999999998855 689999999999876543 8999999999986432 468999999999
Q ss_pred HHHHHHhCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhc
Q 042634 317 LLLETFTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTC 396 (427)
Q Consensus 317 vl~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c 396 (427)
|+|+|+.|+.||... ...+. .+..+.++.-..+ |... + ...+++++|+.|
T Consensus 561 ILYqMvYgktPf~~~-------~n~~a-----Kl~aI~~P~~~Ie--------------fp~~--~--~~~~li~~mK~C 610 (677)
T KOG0596|consen 561 ILYQMVYGKTPFGQI-------INQIA-----KLHAITDPNHEIE--------------FPDI--P--ENDELIDVMKCC 610 (677)
T ss_pred HHHHHHhcCCchHHH-------HHHHH-----HHHhhcCCCcccc--------------ccCC--C--CchHHHHHHHHH
Confidence 999999999999753 11111 1233333321111 1111 1 122389999999
Q ss_pred CCCCCCCCCCHHHHHHH
Q 042634 397 SSELPRERMNMEEVAAQ 413 (427)
Q Consensus 397 l~~dP~~Rpt~~ev~~~ 413 (427)
|++||++|||+.|+++.
T Consensus 611 L~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 611 LARDPKKRWSIPELLQH 627 (677)
T ss_pred HhcCcccCCCcHHHhcC
Confidence 99999999999999864
No 225
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.97 E-value=6.4e-32 Score=248.27 Aligned_cols=193 Identities=26% Similarity=0.287 Sum_probs=152.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++.+.+.. .+...+++|||+++++|.+++..... ..+++.+++.++.|++.|++||| +.|++||
T Consensus 56 l~~~~i~~~~~~~~~----~~~~~~lv~e~~~~~~l~~~l~~~~~--~~l~~~~~~~~~~~l~~~l~~lH---~~~i~H~ 126 (257)
T cd08223 56 LKHPNIVAYRESWEG----EDGLLYIVMGFCEGGDLYHKLKEQKG--KLLPENQVVEWFVQIAMALQYLH---EKHILHR 126 (257)
T ss_pred CCCCCeeeeeeeecC----CCCEEEEEecccCCCcHHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeecc
Confidence 569999998876422 23457899999999999998865322 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||++...... ..++..|+|||+..+..++.++||||+||++||+++|+.||....
T Consensus 127 di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~ 206 (257)
T cd08223 127 DLKTQNVFLTRTNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKD 206 (257)
T ss_pred CCCchhEEEecCCcEEEecccceEEecccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC
Confidence 99999999999999999999999865432 256788999999999999999999999999999999999986421
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
.............. ..+...+.++.+++.+||+.||++|||+.|+++
T Consensus 207 -----~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 207 -----MNSLVYRIIEGKLP----------------------------PMPKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred -----HHHHHHHHHhcCCC----------------------------CCccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 11111111000000 012234567899999999999999999999986
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
+
T Consensus 254 ~ 254 (257)
T cd08223 254 Q 254 (257)
T ss_pred C
Confidence 4
No 226
>PTZ00284 protein kinase; Provisional
Probab=99.97 E-value=5.9e-32 Score=269.70 Aligned_cols=141 Identities=23% Similarity=0.307 Sum_probs=118.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCC-CCeee
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCE-TPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~-~~ivH 257 (427)
..|++++++++++.. .....++|||++ +++|.+++.+. ..+++..+..++.||+.||+||| . .||+|
T Consensus 188 ~~~~~i~~i~~~~~~----~~~~~~iv~~~~-g~~l~~~l~~~----~~l~~~~~~~i~~qi~~aL~yLH---~~~gIiH 255 (467)
T PTZ00284 188 ADRFPLMKIQRYFQN----ETGHMCIVMPKY-GPCLLDWIMKH----GPFSHRHLAQIIFQTGVALDYFH---TELHLMH 255 (467)
T ss_pred ccCcceeeeEEEEEc----CCceEEEEEecc-CCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---hcCCeec
Confidence 456677777766432 234689999998 88898888654 35899999999999999999999 6 59999
Q ss_pred ccccCCceeeCCCC----------------ceEecccccccccCC---cCCCccccccccccCCCCcCccccchhHHHHH
Q 042634 258 CDLKPSNVLLDGEL----------------TAHVGDFGLAKFLPE---ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILL 318 (427)
Q Consensus 258 rDlkp~NIll~~~~----------------~~kL~DFG~a~~~~~---~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl 318 (427)
|||||+|||++.++ .+||+|||.+..... ...||..|+|||++.+..++.++|||||||++
T Consensus 256 rDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil 335 (467)
T PTZ00284 256 TDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCII 335 (467)
T ss_pred CCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHH
Confidence 99999999998655 499999998865432 23788999999999999999999999999999
Q ss_pred HHHHhCCCCCCcc
Q 042634 319 LETFTGKRPTNEM 331 (427)
Q Consensus 319 ~ell~g~~pf~~~ 331 (427)
|||++|+.||.+.
T Consensus 336 ~elltG~~pf~~~ 348 (467)
T PTZ00284 336 YELYTGKLLYDTH 348 (467)
T ss_pred HHHHhCCCCCCCC
Confidence 9999999999753
No 227
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.97 E-value=9e-32 Score=252.25 Aligned_cols=191 Identities=23% Similarity=0.341 Sum_probs=150.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. +...++||||+++++|.+++.. ..+++..+..++.||+.||+||| +.||+||
T Consensus 76 l~h~~ii~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~-----~~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~ 142 (292)
T cd06658 76 YHHENVVDMYNSYLV-----GDELWVVMEFLEGGALTDIVTH-----TRMNEEQIATVCLSVLRALSYLH---NQGVIHR 142 (292)
T ss_pred CCCCcHHHHHHheec-----CCeEEEEEeCCCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEeec
Confidence 579999999988543 5678999999999999988753 23788999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||++...... ..++..|+|||.+.+..++.++|||||||++||+++|+.||....
T Consensus 143 dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~ 222 (292)
T cd06658 143 DIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEP 222 (292)
T ss_pred CCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999998754322 256788999999988889999999999999999999999986421
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
. ......+....+.... .....+..+.+++.+||..||++|||++|+++
T Consensus 223 ~--~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 271 (292)
T cd06658 223 P--LQAMRRIRDNLPPRVK-----------------------------DSHKVSSVLRGFLDLMLVREPSQRATAQELLQ 271 (292)
T ss_pred H--HHHHHHHHhcCCCccc-----------------------------cccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 1 0000111111100000 01123456788999999999999999999997
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
.
T Consensus 272 ~ 272 (292)
T cd06658 272 H 272 (292)
T ss_pred C
Confidence 5
No 228
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.97 E-value=6.5e-32 Score=248.88 Aligned_cols=195 Identities=27% Similarity=0.458 Sum_probs=155.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. ....+++|||+++++|.+++..... ..+++..+..++.|++.|+.||| +.|++|+
T Consensus 58 l~h~~i~~~~~~~~~-----~~~~~~v~e~~~~~~L~~~i~~~~~--~~~~~~~~~~~~~~i~~al~~lh---~~~i~h~ 127 (261)
T cd05034 58 LRHDKLVQLYAVCSE-----EEPIYIVTEYMSKGSLLDFLKSGEG--KKLRLPQLVDMAAQIAEGMAYLE---SRNYIHR 127 (261)
T ss_pred CCCCCEeeeeeeeec-----CCceEEEEeccCCCCHHHHHhcccc--CCCCHHHHHHHHHHHHHHHHHHH---hCCcccC
Confidence 569999999887433 4568999999999999999876432 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC-------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT-------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~-------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~ 330 (427)
||||+||+++.++.+||+|||.++...... ..+..|+|||.+.+..++.++||||+||++||+++ |+.||.+
T Consensus 128 di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~ 207 (261)
T cd05034 128 DLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPG 207 (261)
T ss_pred CcchheEEEcCCCCEEECccccceeccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 999999999999999999999998764321 34467999999998889999999999999999998 9999865
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
... ....+....... ...+..++.++.+++.+||+.+|++|||++|+
T Consensus 208 ~~~--~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l 254 (261)
T cd05034 208 MTN--REVLEQVERGYR-------------------------------MPRPPNCPEELYDLMLQCWDKDPEERPTFEYL 254 (261)
T ss_pred CCH--HHHHHHHHcCCC-------------------------------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHH
Confidence 311 111111000000 00112235678999999999999999999999
Q ss_pred HHHHHH
Q 042634 411 AAQLLS 416 (427)
Q Consensus 411 ~~~L~~ 416 (427)
.+.|+.
T Consensus 255 ~~~l~~ 260 (261)
T cd05034 255 QSFLED 260 (261)
T ss_pred HHHHhc
Confidence 998875
No 229
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.97 E-value=1.4e-32 Score=266.98 Aligned_cols=141 Identities=21% Similarity=0.292 Sum_probs=124.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+. .+...++||||+++|+|.+++... ..+++..++.++.||+.||+||| +.||+||
T Consensus 58 l~h~~iv~~~~~~~-----~~~~~~lv~E~~~~g~L~~~i~~~----~~~~~~~~~~~~~qi~~al~~lH---~~~ivHr 125 (376)
T cd05598 58 ADNEWVVKLYYSFQ-----DKDNLYFVMDYIPGGDMMSLLIRL----GIFEEDLARFYIAELTCAIESVH---KMGFIHR 125 (376)
T ss_pred CCCCCcceEEEEEE-----cCCEEEEEEeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeC
Confidence 57999999998743 367889999999999999998654 34888999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccC-------------------------------------------------CcCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLP-------------------------------------------------EATN 289 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~-------------------------------------------------~~~~ 289 (427)
||||+|||++.++.+||+|||+|.... ....
T Consensus 126 Dlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (376)
T cd05598 126 DIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLV 205 (376)
T ss_pred CCCHHHEEECCCCCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccC
Confidence 999999999999999999999975221 0125
Q ss_pred CccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 290 NFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 290 ~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 206 gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~ 247 (376)
T cd05598 206 GTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAD 247 (376)
T ss_pred CCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCC
Confidence 888999999999999999999999999999999999999753
No 230
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=4e-32 Score=255.17 Aligned_cols=191 Identities=19% Similarity=0.254 Sum_probs=151.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. ....++|+||+++++|.+++.. ..+++.++..++.|++.|++||| +.|++||
T Consensus 73 l~h~~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~-----~~l~~~~~~~i~~~l~~al~~LH---~~~i~H~ 139 (296)
T cd06655 73 LKNPNIVNFLDSFLV-----GDELFVVMEYLAGGSLTDVVTE-----TCMDEAQIAAVCRECLQALEFLH---ANQVIHR 139 (296)
T ss_pred cCCCceeeeeeeEec-----CceEEEEEEecCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHH---HCCcccC
Confidence 579999999988543 5678999999999999998854 34889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||++...... ..++..|+|||.+.+..++.++|||||||++|++++|+.||....
T Consensus 140 dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~ 219 (296)
T cd06655 140 DIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNEN 219 (296)
T ss_pred CCCHHHEEECCCCCEEEccCccchhcccccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999998765332 256778999999998889999999999999999999999996532
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
... .... ........ ...+..++..+.+++.+||..||++|||+.++++
T Consensus 220 ~~~-~~~~-~~~~~~~~-----------------------------~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 220 PLR-ALYL-IATNGTPE-----------------------------LQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred HHH-HHHH-HHhcCCcc-----------------------------cCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 110 0000 00000000 0012234556889999999999999999999985
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
.
T Consensus 269 ~ 269 (296)
T cd06655 269 H 269 (296)
T ss_pred C
Confidence 3
No 231
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.97 E-value=8.4e-32 Score=248.15 Aligned_cols=194 Identities=23% Similarity=0.291 Sum_probs=152.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. +...+++|||+++++|.+++.... ..+++..+..++.|++.|++||| +.|++|+
T Consensus 57 ~~h~~i~~~~~~~~~-----~~~~~l~~e~~~~~~l~~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~ 125 (262)
T cd06613 57 CRHPNIVAYFGSYLR-----RDKLWIVMEYCGGGSLQDIYQVTR---GPLSELQIAYVCRETLKGLAYLH---ETGKIHR 125 (262)
T ss_pred CCCCChhceEEEEEe-----CCEEEEEEeCCCCCcHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHH---hCCceec
Confidence 579999999987533 567899999999999999886542 35889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCC---CcCccccchhHHHHHHHHHhCCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGS---EVSTSGDVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~---~~~~~~DiwS~G~vl~ell~g~~pf~ 329 (427)
||||+||+++.++.+||+|||.+...... ..++..|+|||.+.+. .++.++|||||||++|||++|+.||.
T Consensus 126 dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~ 205 (262)
T cd06613 126 DIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMF 205 (262)
T ss_pred CCChhhEEECCCCCEEECccccchhhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999998765432 2567789999998776 78999999999999999999999997
Q ss_pred cccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 330 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
....... .......... ... .......+.++.+++.+||+.+|.+|||+++
T Consensus 206 ~~~~~~~-~~~~~~~~~~-------~~~---------------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ 256 (262)
T cd06613 206 DLHPMRA-LFLISKSNFP-------PPK---------------------LKDKEKWSPVFHDFIKKCLTKDPKKRPTATK 256 (262)
T ss_pred CCCHHHH-HHHHHhccCC-------Ccc---------------------ccchhhhhHHHHHHHHHHcCCChhhCCCHHH
Confidence 5321100 0000000000 000 0012234567899999999999999999999
Q ss_pred HHH
Q 042634 410 VAA 412 (427)
Q Consensus 410 v~~ 412 (427)
|+.
T Consensus 257 il~ 259 (262)
T cd06613 257 LLQ 259 (262)
T ss_pred Hhc
Confidence 975
No 232
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.97 E-value=8e-32 Score=258.54 Aligned_cols=223 Identities=17% Similarity=0.180 Sum_probs=150.9
Q ss_pred cccccchhhhccccccCC-CCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 179 IRHRNLVKIITSCASVDF-QGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
++||||+++++++..... ......++++|++ +++|.+++.. ..+++..+..++.|++.||+||| +.||+|
T Consensus 71 l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH 141 (343)
T cd07878 71 MKHENVIGLLDVFTPATSIENFNEVYLVTNLM-GADLNNIVKC-----QKLSDEHVQFLIYQLLRGLKYIH---SAGIIH 141 (343)
T ss_pred cCCCchhhhhhhhcccccccccCcEEEEeecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeec
Confidence 579999999987643221 1224568999988 8899887753 34899999999999999999999 899999
Q ss_pred ccccCCceeeCCCCceEecccccccccCCcC---CCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEAT---NNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~DFG~a~~~~~~~---~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
|||||+||+++.++.+||+|||+++...... .++..|+|||++.+ ..++.++||||+||++|||++|+.||.+...
T Consensus 142 rdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~ 221 (343)
T cd07878 142 RDLKPSNVAVNEDCELRILDFGLARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDY 221 (343)
T ss_pred ccCChhhEEECCCCCEEEcCCccceecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCH
Confidence 9999999999999999999999998765433 67889999999877 5689999999999999999999999975311
Q ss_pred CCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 042634 334 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQ 413 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~ 413 (427)
...+......... ...+.......... .........................+.+++.+|++.||++|||++|++++
T Consensus 222 -~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 222 -IDQLKRIMEVVGT-PSPEVLKKISSEHA-RKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred -HHHHHHHHHHhCC-CCHHHHHhcchhhH-HHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 1111111111000 00000000000000 00000000000000000001123457899999999999999999999865
No 233
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.97 E-value=3e-32 Score=281.69 Aligned_cols=198 Identities=20% Similarity=0.301 Sum_probs=150.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcC----CCC
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYC----ETP 254 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~----~~~ 254 (427)
++|||||++++.+.. ......++||||+++|+|.+++.........+++..++.|+.||+.||.|||... ..+
T Consensus 69 L~HPNIVrl~d~f~d---e~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~ 145 (1021)
T PTZ00266 69 LKHKNIVRYIDRFLN---KANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGER 145 (1021)
T ss_pred cCCCCcCeEEEEEEe---cCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCC
Confidence 579999999987543 1245689999999999999998754333346899999999999999999999421 146
Q ss_pred eeeccccCCceeeCC-----------------CCceEecccccccccCCc-----CCCccccccccccCC--CCcCcccc
Q 042634 255 IVHCDLKPSNVLLDG-----------------ELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMG--SEVSTSGD 310 (427)
Q Consensus 255 ivHrDlkp~NIll~~-----------------~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~--~~~~~~~D 310 (427)
||||||||+|||++. ...+||+|||+++..... ..+|+.|+|||++.+ ..++.++|
T Consensus 146 IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSD 225 (1021)
T PTZ00266 146 VLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSD 225 (1021)
T ss_pred ceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhH
Confidence 999999999999954 235899999999865432 268899999999864 45889999
Q ss_pred chhHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHH
Q 042634 311 VYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVL 390 (427)
Q Consensus 311 iwS~G~vl~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (427)
|||||||+|||++|..||.... .+...+...... .. ......+.++.
T Consensus 226 VWSLG~ILYELLTGk~PF~~~~----~~~qli~~lk~~-----p~------------------------lpi~~~S~eL~ 272 (1021)
T PTZ00266 226 MWALGCIIYELCSGKTPFHKAN----NFSQLISELKRG-----PD------------------------LPIKGKSKELN 272 (1021)
T ss_pred HHHHHHHHHHHHHCCCCCCcCC----cHHHHHHHHhcC-----CC------------------------CCcCCCCHHHH
Confidence 9999999999999999996431 122221111000 00 00111345688
Q ss_pred HHHhhcCCCCCCCCCCHHHHHH
Q 042634 391 GIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 391 ~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
+++.+||+.+|.+|||+.|++.
T Consensus 273 dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 273 ILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred HHHHHHhcCChhHCcCHHHHhc
Confidence 9999999999999999999985
No 234
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=9.6e-32 Score=273.71 Aligned_cols=200 Identities=27% Similarity=0.414 Sum_probs=164.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccch---hh-------h--hccCHHHHHHHHHHHHHHHHH
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNR---EA-------L--KNLNLLQRLSIAVDVASALDY 246 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---~~-------~--~~l~~~~~~~~~~~i~~~L~~ 246 (427)
..|||++.+++.|.. ....++|+||+..|+|.++++..+ .. . ..++..+.+.++.|||.|++|
T Consensus 359 g~H~niv~llG~~t~-----~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~ 433 (609)
T KOG0200|consen 359 GKHPNIVNLLGACTQ-----DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEY 433 (609)
T ss_pred cCCcchhhheeeecc-----CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHH
Confidence 679999999999876 467899999999999999998765 00 0 138899999999999999999
Q ss_pred HhhcCCCCeeeccccCCceeeCCCCceEecccccccccCCcC-------C--CccccccccccCCCCcCccccchhHHHH
Q 042634 247 LHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT-------N--NFFNFQIAEYGMGSEVSTSGDVYSFGIL 317 (427)
Q Consensus 247 LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~-------~--~~~~y~aPE~~~~~~~~~~~DiwS~G~v 317 (427)
|+ +.++||||+.++|||+.++..+||+|||+|+...... . -...|||||.+....|+.++|||||||+
T Consensus 434 L~---~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~ 510 (609)
T KOG0200|consen 434 LA---SVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGIL 510 (609)
T ss_pred Hh---hCCccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHH
Confidence 99 8999999999999999999999999999999543322 2 2346999999999999999999999999
Q ss_pred HHHHHh-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhc
Q 042634 318 LLETFT-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTC 396 (427)
Q Consensus 318 l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c 396 (427)
+||+++ |..||.+..... .+.++++. ..+...|..|..+++++|+.|
T Consensus 511 L~EifsLG~~PYp~~~~~~-~l~~~l~~-------------------------------G~r~~~P~~c~~eiY~iM~~C 558 (609)
T KOG0200|consen 511 LWEIFTLGGTPYPGIPPTE-ELLEFLKE-------------------------------GNRMEQPEHCSDEIYDLMKSC 558 (609)
T ss_pred HHHHhhCCCCCCCCCCcHH-HHHHHHhc-------------------------------CCCCCCCCCCCHHHHHHHHHH
Confidence 999999 999997632111 11112221 112225677889999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHH
Q 042634 397 SSELPRERMNMEEVAAQLLSFR 418 (427)
Q Consensus 397 l~~dP~~Rpt~~ev~~~L~~~~ 418 (427)
|+.+|++||++.|+++.++...
T Consensus 559 W~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 559 WNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred hCCCcccCCCHHHHHHHHHHHH
Confidence 9999999999999999999854
No 235
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.97 E-value=5.1e-32 Score=250.81 Aligned_cols=198 Identities=23% Similarity=0.327 Sum_probs=155.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+|||++++++.+.. +...+++|||+++++|.+++.........+++..++.++.|++.||.|||+ ..|++||
T Consensus 66 ~~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~--~~~i~H~ 138 (269)
T cd08528 66 LRHPNIVRYYKTFLE-----NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK--EKRIVHR 138 (269)
T ss_pred CCCCCeeeEEeeEcc-----CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc--CCceeec
Confidence 579999999988543 567899999999999998875432223468899999999999999999993 3689999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
||||+||+++.++.+||+|||.+...... ..++..|+|||++.+..++.++||||||+++||+++|+.||....
T Consensus 139 dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~- 217 (269)
T cd08528 139 DLTPNNIMLGEDDKVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTN- 217 (269)
T ss_pred CCCHHHEEECCCCcEEEecccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccC-
Confidence 99999999999999999999999875543 257788999999998889999999999999999999999986421
Q ss_pred CCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 042634 334 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQ 413 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~ 413 (427)
................ .....+.++.+++.+||+.||++|||+.|+.++
T Consensus 218 ----~~~~~~~~~~~~~~~~---------------------------~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 218 ----MLSLATKIVEAVYEPL---------------------------PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred ----HHHHHHHHhhccCCcC---------------------------CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 1111111000000000 011234568899999999999999999999998
Q ss_pred HH
Q 042634 414 LL 415 (427)
Q Consensus 414 L~ 415 (427)
++
T Consensus 267 ~~ 268 (269)
T cd08528 267 IS 268 (269)
T ss_pred hc
Confidence 75
No 236
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.97 E-value=6.2e-32 Score=278.28 Aligned_cols=202 Identities=20% Similarity=0.309 Sum_probs=155.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh-------hhhccCHHHHHHHHHHHHHHHHHHhhcC
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE-------ALKNLNLLQRLSIAVDVASALDYLHHYC 251 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-------~~~~l~~~~~~~~~~~i~~~L~~LH~~~ 251 (427)
++||||+++++.+.. +...++||||+++|+|.+++..... ....+++..++.++.||+.||+|||
T Consensus 59 L~HPNIVkl~~v~~d-----~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLH--- 130 (932)
T PRK13184 59 LIHPGIVPVYSICSD-----GDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVH--- 130 (932)
T ss_pred CCCcCcCeEEEEEee-----CCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHH---
Confidence 579999999988543 5678999999999999998854211 1134567788999999999999999
Q ss_pred CCCeeeccccCCceeeCCCCceEecccccccccCC------------------------cCCCccccccccccCCCCcCc
Q 042634 252 ETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPE------------------------ATNNFFNFQIAEYGMGSEVST 307 (427)
Q Consensus 252 ~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~------------------------~~~~~~~y~aPE~~~~~~~~~ 307 (427)
+.||+||||||+||+++.++.+||+|||+|+.... ...||+.|+|||++.+..++.
T Consensus 131 s~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~ 210 (932)
T PRK13184 131 SKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASE 210 (932)
T ss_pred HCCccccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCc
Confidence 89999999999999999999999999999986511 125889999999999999999
Q ss_pred cccchhHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHH
Q 042634 308 SGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLV 387 (427)
Q Consensus 308 ~~DiwS~G~vl~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (427)
++|||||||++|||++|+.||.......... .... .++.. .....+.+.
T Consensus 211 kSDIWSLGVILyELLTG~~PF~~~~~~ki~~----~~~i-------~~P~~--------------------~~p~~~iP~ 259 (932)
T PRK13184 211 STDIYALGVILYQMLTLSFPYRRKKGRKISY----RDVI-------LSPIE--------------------VAPYREIPP 259 (932)
T ss_pred HhHHHHHHHHHHHHHHCCCCCCCcchhhhhh----hhhc-------cChhh--------------------ccccccCCH
Confidence 9999999999999999999997532111100 0000 00000 001123456
Q ss_pred HHHHHHhhcCCCCCCCCC-CHHHHHHHHHHHHH
Q 042634 388 SVLGIGVTCSSELPRERM-NMEEVAAQLLSFRN 419 (427)
Q Consensus 388 ~~~~l~~~cl~~dP~~Rp-t~~ev~~~L~~~~~ 419 (427)
.+.+++.+|++.||++|| +++++.+.|+...+
T Consensus 260 ~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 260 FLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 688999999999999995 67788888887754
No 237
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.97 E-value=8e-32 Score=249.14 Aligned_cols=189 Identities=21% Similarity=0.297 Sum_probs=151.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....+++|||+++++|.+++... ..+++..+..++.|++.||+||| +.|++||
T Consensus 63 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~~l~~~l~~lH---~~~ivH~ 130 (267)
T cd06628 63 LQHENIVQYLGSSLD-----ADHLNIFLEYVPGGSVAALLNNY----GAFEETLVRNFVRQILKGLNYLH---NRGIIHR 130 (267)
T ss_pred cCCCCeeeEEEEEEe-----CCccEEEEEecCCCCHHHHHHhc----cCccHHHHHHHHHHHHHHHHHHH---hcCcccc
Confidence 479999999987543 56789999999999999998654 34888999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKR 326 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~ 326 (427)
||||+||+++.++.+||+|||.++..... ..++..|+|||.+.+..++.++||||+||++||+++|..
T Consensus 131 di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~ 210 (267)
T cd06628 131 DIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKH 210 (267)
T ss_pred cCCHHHEEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCC
Confidence 99999999999999999999999866421 146678999999998889999999999999999999999
Q ss_pred CCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC
Q 042634 327 PTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN 406 (427)
Q Consensus 327 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt 406 (427)
||..... .... ... ..... ...+...+..+.+++.+||+.||++|||
T Consensus 211 p~~~~~~----~~~~-~~~-----~~~~~-----------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~ 257 (267)
T cd06628 211 PFPDCTQ----LQAI-FKI-----GENAS-----------------------PEIPSNISSEAIDFLEKTFEIDHNKRPT 257 (267)
T ss_pred CCCCccH----HHHH-HHH-----hccCC-----------------------CcCCcccCHHHHHHHHHHccCCchhCcC
Confidence 9975311 1110 000 00000 0012234567899999999999999999
Q ss_pred HHHHHH
Q 042634 407 MEEVAA 412 (427)
Q Consensus 407 ~~ev~~ 412 (427)
+.||++
T Consensus 258 ~~~il~ 263 (267)
T cd06628 258 AAELLK 263 (267)
T ss_pred HHHHhh
Confidence 999986
No 238
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.97 E-value=7.2e-32 Score=247.73 Aligned_cols=192 Identities=22% Similarity=0.273 Sum_probs=153.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. ....++++||+++++|.+++.... ..+++..+..++.|++.|+.||| ..+++||
T Consensus 55 l~~~~i~~~~~~~~~-----~~~~~l~~e~~~~~~L~~~l~~~~---~~l~~~~~~~~~~~l~~~l~~lh---~~~i~H~ 123 (256)
T cd06612 55 CDSPYIVKYYGSYFK-----NTDLWIVMEYCGAGSVSDIMKITN---KTLTEEEIAAILYQTLKGLEYLH---SNKKIHR 123 (256)
T ss_pred CCCCcEeeeeeeeec-----CCcEEEEEecCCCCcHHHHHHhCc---cCCCHHHHHHHHHHHHHHHHHHH---HCCcccC
Confidence 389999999998544 567899999999999999986433 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC------CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||+|+||+++.++.+||+|||.+....... .++..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 124 dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~ 203 (256)
T cd06612 124 DIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIH 203 (256)
T ss_pred CCCcceEEECCCCcEEEcccccchhcccCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcc
Confidence 999999999999999999999998754332 46778999999988899999999999999999999999987532
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
.... . .. ... .... ....+...+.++.+++.+||+.||++|||++||++
T Consensus 204 ~~~~----~-~~-~~~----~~~~---------------------~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 204 PMRA----I-FM-IPN----KPPP---------------------TLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred hhhh----h-hh-hcc----CCCC---------------------CCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 1110 0 00 000 0000 00012334567899999999999999999999986
No 239
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.97 E-value=1.2e-31 Score=254.34 Aligned_cols=146 Identities=19% Similarity=0.332 Sum_probs=118.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh-----hhhccCHHHHHHHHHHHHHHHHHHhhcCCC
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE-----ALKNLNLLQRLSIAVDVASALDYLHHYCET 253 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-----~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~ 253 (427)
++||||+++++.+.. ..+...++||||+. ++|.+++..... ....+++..++.++.|++.||+||| +.
T Consensus 55 l~h~niv~~~~~~~~---~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~ 127 (317)
T cd07867 55 LKHPNVIALQKVFLS---HSDRKVWLLFDYAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLH---AN 127 (317)
T ss_pred CCCCCeeeEEEEEec---cCCCeEEEEEeeeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH---hC
Confidence 579999999887643 22456789999984 577776642211 1134888999999999999999999 89
Q ss_pred CeeeccccCCceee----CCCCceEecccccccccCCc---------CCCccccccccccCC-CCcCccccchhHHHHHH
Q 042634 254 PIVHCDLKPSNVLL----DGELTAHVGDFGLAKFLPEA---------TNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLL 319 (427)
Q Consensus 254 ~ivHrDlkp~NIll----~~~~~~kL~DFG~a~~~~~~---------~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ 319 (427)
||+||||||+||++ +.++.+||+|||+|+..... ..++..|+|||++.+ ..++.++|||||||++|
T Consensus 128 ~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ 207 (317)
T cd07867 128 WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFA 207 (317)
T ss_pred CEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHH
Confidence 99999999999999 56679999999999865332 256788999999876 45799999999999999
Q ss_pred HHHhCCCCCCcc
Q 042634 320 ETFTGKRPTNEM 331 (427)
Q Consensus 320 ell~g~~pf~~~ 331 (427)
||++|++||...
T Consensus 208 el~tg~~~f~~~ 219 (317)
T cd07867 208 ELLTSEPIFHCR 219 (317)
T ss_pred HHHhCCCCcccc
Confidence 999999999753
No 240
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.97 E-value=1.2e-31 Score=249.68 Aligned_cols=192 Identities=23% Similarity=0.325 Sum_probs=148.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. ....++||||+++++|..+ ..+++..+..++.|++.||+||| +.||+|+
T Consensus 56 l~h~~iv~~~~~~~~-----~~~~~lv~e~~~~~~l~~~--------~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~ 119 (279)
T cd06619 56 CDSPYIIGFYGAFFV-----ENRISICTEFMDGGSLDVY--------RKIPEHVLGRIAVAVVKGLTYLW---SLKILHR 119 (279)
T ss_pred CCCCCeeeEEEEEEE-----CCEEEEEEecCCCCChHHh--------hcCCHHHHHHHHHHHHHHHHHHH---HCCEeeC
Confidence 479999999998654 4567899999999998654 23678888999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTG 334 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~ 334 (427)
||||+||+++.++.+||+|||++...... ..++..|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 120 dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~ 199 (279)
T cd06619 120 DVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKN 199 (279)
T ss_pred CCCHHHEEECCCCCEEEeeCCcceecccccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhccc
Confidence 99999999999999999999999865432 36788999999999989999999999999999999999999753222
Q ss_pred CccH--HHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 335 NLTL--HNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 335 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
.... .......... ..+ .......+.++.+++.+||+.+|++||+++|+++
T Consensus 200 ~~~~~~~~~~~~~~~~-----~~~----------------------~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~ 252 (279)
T cd06619 200 QGSLMPLQLLQCIVDE-----DPP----------------------VLPVGQFSEKFVHFITQCMRKQPKERPAPENLMD 252 (279)
T ss_pred ccccchHHHHHHHhcc-----CCC----------------------CCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 1110 0000000000 000 0011113456889999999999999999999987
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
.
T Consensus 253 ~ 253 (279)
T cd06619 253 H 253 (279)
T ss_pred C
Confidence 5
No 241
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.97 E-value=1.1e-31 Score=248.40 Aligned_cols=193 Identities=23% Similarity=0.317 Sum_probs=148.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhcc--CHHHHHHHHHHHHHHHHHHhhcCCCCee
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNL--NLLQRLSIAVDVASALDYLHHYCETPIV 256 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l--~~~~~~~~~~~i~~~L~~LH~~~~~~iv 256 (427)
++|+||+++++.+.. +...++++||+++++|.+++.... ..+ ++..+..++.|++.||+||| ..||+
T Consensus 62 l~h~~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~ 130 (268)
T cd06624 62 LKHRNIVQYLGSDSE-----NGFFKIFMEQVPGGSLSALLRSKW---GPLKDNEQTIIFYTKQILEGLKYLH---DNQIV 130 (268)
T ss_pred cCCCCeeeeeeeecc-----CCEEEEEEecCCCCCHHHHHHHhc---ccCCCcHHHHHHHHHHHHHHHHHHH---HCCEe
Confidence 579999999988544 567899999999999999986532 224 77888999999999999999 89999
Q ss_pred eccccCCceeeCC-CCceEecccccccccCCc------CCCccccccccccCCC--CcCccccchhHHHHHHHHHhCCCC
Q 042634 257 HCDLKPSNVLLDG-ELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGS--EVSTSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 257 HrDlkp~NIll~~-~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~--~~~~~~DiwS~G~vl~ell~g~~p 327 (427)
||||||+||+++. ++.+||+|||.+...... ..++..|+|||++... .++.++||||||+++|++++|+.|
T Consensus 131 h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p 210 (268)
T cd06624 131 HRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPP 210 (268)
T ss_pred ecCCCHHHEEEcCCCCeEEEecchhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCC
Confidence 9999999999976 679999999998765321 2577899999998654 378999999999999999999999
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
|........... ...... . ....+..++.++.+++.+||+.+|++|||+
T Consensus 211 ~~~~~~~~~~~~---~~~~~~----~------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~ 259 (268)
T cd06624 211 FIELGEPQAAMF---KVGMFK----I------------------------HPEIPESLSAEAKNFILRCFEPDPDKRASA 259 (268)
T ss_pred CccccChhhhHh---hhhhhc----c------------------------CCCCCcccCHHHHHHHHHHcCCCchhCCCH
Confidence 864311111000 000000 0 000122345678999999999999999999
Q ss_pred HHHHHH
Q 042634 408 EEVAAQ 413 (427)
Q Consensus 408 ~ev~~~ 413 (427)
.|++++
T Consensus 260 ~~ll~~ 265 (268)
T cd06624 260 HDLLQD 265 (268)
T ss_pred HHHHhC
Confidence 999864
No 242
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.97 E-value=1.4e-31 Score=245.25 Aligned_cols=193 Identities=24% Similarity=0.399 Sum_probs=152.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++++|.+++.... ..+++..+..++.|++.|++||| +++++||
T Consensus 49 l~~~~i~~~~~~~~~-----~~~~~~v~e~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~l~~lH---~~~i~h~ 117 (251)
T cd05041 49 YDHPNIVKLIGVCVQ-----KQPIYIVMELVPGGSLLTFLRKKK---NRLTVKKLLQMSLDAAAGMEYLE---SKNCIHR 117 (251)
T ss_pred CCCCCeEEEEEEEec-----CCCeEEEEEcCCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---hCCEehh
Confidence 579999999887543 457899999999999999986532 34788899999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC--------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT--------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~--------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~ 329 (427)
||||+||+++.++.+||+|||.++...... ..+..|+|||.+.+..++.++|||||||++||+++ |..||.
T Consensus 118 di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~ 197 (251)
T cd05041 118 DLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYP 197 (251)
T ss_pred hcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCc
Confidence 999999999999999999999998654211 23456999999988889999999999999999999 888886
Q ss_pred cccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 330 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
.... ......+..... ...+..++.++.+++.+||+.+|++|||++|
T Consensus 198 ~~~~--~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e 244 (251)
T cd05041 198 GMSN--QQTRERIESGYR-------------------------------MPAPQLCPEEIYRLMLQCWAYDPENRPSFSE 244 (251)
T ss_pred cCCH--HHHHHHHhcCCC-------------------------------CCCCccCCHHHHHHHHHHhccChhhCcCHHH
Confidence 5321 111111100000 0012234567999999999999999999999
Q ss_pred HHHHHH
Q 042634 410 VAAQLL 415 (427)
Q Consensus 410 v~~~L~ 415 (427)
+++.|+
T Consensus 245 ll~~l~ 250 (251)
T cd05041 245 IYNELQ 250 (251)
T ss_pred HHHHhh
Confidence 999886
No 243
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.97 E-value=2.9e-31 Score=246.90 Aligned_cols=189 Identities=21% Similarity=0.271 Sum_probs=153.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
+.|||++++++.+.. +...++||||+++|+|.+++... .+++.++..++.|++.|++|+| +.+++|+
T Consensus 59 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~i~~~-----~l~~~~~~~~~~~l~~~l~~lh---~~~ivH~ 125 (277)
T cd06640 59 CDSPYVTKYYGSYLK-----GTKLWIIMEYLGGGSALDLLRAG-----PFDEFQIATMLKEILKGLDYLH---SEKKIHR 125 (277)
T ss_pred CCCCCEeeEEEEEEE-----CCEEEEEEecCCCCcHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH---hCCccCc
Confidence 579999999998544 56789999999999999988643 4788899999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC------CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||+|+||+++.++.++|+|||.+....... .++..|+|||++.+..++.++|+|||||++|||++|..||....
T Consensus 126 dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~ 205 (277)
T cd06640 126 DIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMH 205 (277)
T ss_pred CCChhhEEEcCCCCEEEcccccceeccCCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcC
Confidence 999999999999999999999997654322 46678999999988889999999999999999999999987532
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
... ......... .......++.++.+++.+||+.+|++|||++|+++
T Consensus 206 ~~~--~~~~~~~~~-------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06640 206 PMR--VLFLIPKNN-------------------------------PPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLK 252 (277)
T ss_pred hHh--HhhhhhcCC-------------------------------CCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHh
Confidence 110 000000000 00123346778999999999999999999999987
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
.
T Consensus 253 ~ 253 (277)
T cd06640 253 H 253 (277)
T ss_pred C
Confidence 7
No 244
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.97 E-value=5.3e-32 Score=261.96 Aligned_cols=193 Identities=19% Similarity=0.225 Sum_probs=147.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+. .+...++||||+++|+|.+++... .+++..+..++.||+.||+||| +.||+||
T Consensus 100 ~~hp~iv~~~~~~~-----~~~~~~lv~Ey~~gg~L~~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH---~~~ivHr 166 (371)
T cd05622 100 ANSPWVVQLFYAFQ-----DDRYLYMVMEYMPGGDLVNLMSNY-----DVPEKWARFYTAEVVLALDAIH---SMGFIHR 166 (371)
T ss_pred CCCCCCCeEEEEEE-----cCCEEEEEEcCCCCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHH---HCCEEeC
Confidence 57999999998753 356789999999999999988543 3788899999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-------CCCccccccccccCCCC----cCccccchhHHHHHHHHHhCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-------TNNFFNFQIAEYGMGSE----VSTSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-------~~~~~~y~aPE~~~~~~----~~~~~DiwS~G~vl~ell~g~~p 327 (427)
||||+|||++.++.+||+|||+|+..... ..||+.|+|||++.... ++.++|||||||++|||++|+.|
T Consensus 167 DLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~P 246 (371)
T cd05622 167 DVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 246 (371)
T ss_pred CCCHHHEEECCCCCEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCC
Confidence 99999999999999999999999865432 25889999999987543 78999999999999999999999
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCC--CC
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRE--RM 405 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~--Rp 405 (427)
|..... .......... ... .. + ......+..+.+++.+|+..++.+ ||
T Consensus 247 f~~~~~-----~~~~~~i~~~-----~~~-~~----------------~---~~~~~~s~~~~~li~~~L~~~~~r~~r~ 296 (371)
T cd05622 247 FYADSL-----VGTYSKIMNH-----KNS-LT----------------F---PDDNDISKEAKNLICAFLTDREVRLGRN 296 (371)
T ss_pred CCCCCH-----HHHHHHHHcC-----CCc-cc----------------C---CCcCCCCHHHHHHHHHHcCChhhhcCCC
Confidence 975311 1111111000 000 00 0 011123556788999999844433 78
Q ss_pred CHHHHHHHH
Q 042634 406 NMEEVAAQL 414 (427)
Q Consensus 406 t~~ev~~~L 414 (427)
+++|++++.
T Consensus 297 ~~~ei~~h~ 305 (371)
T cd05622 297 GVEEIKRHL 305 (371)
T ss_pred CHHHHhcCc
Confidence 999988753
No 245
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.97 E-value=7.2e-32 Score=251.59 Aligned_cols=197 Identities=20% Similarity=0.218 Sum_probs=150.9
Q ss_pred cccccchhhhccccccCC-CCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 179 IRHRNLVKIITSCASVDF-QGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
.+|||++++++.+..... ..+...+++|||+++|+|.+++..... ..+++..+..++.|++.|++||| +.||+|
T Consensus 70 ~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH---~~~ivH 144 (282)
T cd06636 70 SHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKG--NALKEDWIAYICREILRGLAHLH---AHKVIH 144 (282)
T ss_pred cCCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccC--CCCCHHHHHHHHHHHHHHHHHHH---HCCccc
Confidence 369999999988653221 224567999999999999998865332 34788889999999999999999 899999
Q ss_pred ccccCCceeeCCCCceEecccccccccCC------cCCCccccccccccC-----CCCcCccccchhHHHHHHHHHhCCC
Q 042634 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGM-----GSEVSTSGDVYSFGILLLETFTGKR 326 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~-----~~~~~~~~DiwS~G~vl~ell~g~~ 326 (427)
|||||+||+++.++.+||+|||.+..... ...++..|+|||.+. ...++.++|||||||++|||++|..
T Consensus 145 ~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~ 224 (282)
T cd06636 145 RDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAP 224 (282)
T ss_pred CCCCHHHEEECCCCCEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCC
Confidence 99999999999999999999999875432 125778899999876 3467889999999999999999999
Q ss_pred CCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC
Q 042634 327 PTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN 406 (427)
Q Consensus 327 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt 406 (427)
||...... ..... . ..... .......++.++.+++.+||+.||.+|||
T Consensus 225 p~~~~~~~----~~~~~-~-----~~~~~----------------------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~ 272 (282)
T cd06636 225 PLCDMHPM----RALFL-I-----PRNPP----------------------PKLKSKKWSKKFIDFIEGCLVKNYLSRPS 272 (282)
T ss_pred CccccCHH----hhhhh-H-----hhCCC----------------------CCCcccccCHHHHHHHHHHhCCChhhCcC
Confidence 99653110 00000 0 00000 00011234567999999999999999999
Q ss_pred HHHHHH
Q 042634 407 MEEVAA 412 (427)
Q Consensus 407 ~~ev~~ 412 (427)
+.|+++
T Consensus 273 ~~ell~ 278 (282)
T cd06636 273 TEQLLK 278 (282)
T ss_pred HHHHhc
Confidence 999975
No 246
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.97 E-value=2.1e-31 Score=245.43 Aligned_cols=195 Identities=24% Similarity=0.429 Sum_probs=153.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|+|++++.+.+.. ...+++|||+++++|.+++..... ..+++..++.++.|++.||+||| ..|++||
T Consensus 58 l~~~~i~~~~~~~~~------~~~~~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~ 126 (260)
T cd05073 58 LQHDKLVKLHAVVTK------EPIYIITEFMAKGSLLDFLKSDEG--SKQPLPKLIDFSAQIAEGMAFIE---QRNYIHR 126 (260)
T ss_pred cCCCCcceEEEEEcC------CCeEEEEEeCCCCcHHHHHHhCCc--cccCHHHHHHHHHHHHHHHHHHH---hCCcccc
Confidence 579999999877433 457899999999999999865432 45788899999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC-------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT-------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~-------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~ 330 (427)
||||+||+++.++.+||+|||.+....... .++..|+|||++....++.++|||||||++|++++ |+.||..
T Consensus 127 dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~ 206 (260)
T cd05073 127 DLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPG 206 (260)
T ss_pred ccCcceEEEcCCCcEEECCCcceeeccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCC
Confidence 999999999999999999999997654322 34467999999988889999999999999999998 9999875
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
... ............. ..+...+.++.+++.+||+.+|++|||+.++
T Consensus 207 ~~~--~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l 253 (260)
T cd05073 207 MSN--PEVIRALERGYRM-------------------------------PRPENCPEELYNIMMRCWKNRPEERPTFEYI 253 (260)
T ss_pred CCH--HHHHHHHhCCCCC-------------------------------CCcccCCHHHHHHHHHHcccCcccCcCHHHH
Confidence 311 1111111100000 0112235668999999999999999999999
Q ss_pred HHHHHHH
Q 042634 411 AAQLLSF 417 (427)
Q Consensus 411 ~~~L~~~ 417 (427)
.+.|+.+
T Consensus 254 ~~~L~~~ 260 (260)
T cd05073 254 QSVLDDF 260 (260)
T ss_pred HHHHhcC
Confidence 9998753
No 247
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.97 E-value=9.4e-32 Score=252.37 Aligned_cols=201 Identities=18% Similarity=0.191 Sum_probs=146.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
..|++++++++.+.... ......++++|++ ..++.+.+... ...++..+..++.|++.||+||| +.+|+||
T Consensus 80 ~~h~~i~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH---~~~iiHr 150 (294)
T PHA02882 80 IDHLGIPKYYGCGSFKR-CRMYYRFILLEKL-VENTKEIFKRI----KCKNKKLIKNIMKDMLTTLEYIH---EHGISHG 150 (294)
T ss_pred CCCCCCCcEEEeeeEec-CCceEEEEEEehh-ccCHHHHHHhh----ccCCHHHHHHHHHHHHHHHHHHH---hCCeecC
Confidence 57899999887643311 1112346677766 34555544322 23567888999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC-------------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE-------------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGK 325 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~-------------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~ 325 (427)
||||+|||++.++.+||+|||+|+.... ...||+.|+|||+..+..++.++|||||||++|||++|+
T Consensus 151 DiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~ 230 (294)
T PHA02882 151 DIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIK 230 (294)
T ss_pred CCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999976421 125889999999999999999999999999999999999
Q ss_pred CCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC
Q 042634 326 RPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM 405 (427)
Q Consensus 326 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp 405 (427)
.||.......... ......+... +..... ....++.++.+++..||+.+|++||
T Consensus 231 ~P~~~~~~~~~~~-~~~~~~~~~~---~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~rp 284 (294)
T PHA02882 231 LPWKGFGHNGNLI-HAAKCDFIKR---LHEGKI----------------------KIKNANKFIYDFIECVTKLSYEEKP 284 (294)
T ss_pred CCCCccccchHHH-HHhHHHHHHH---hhhhhh----------------------ccCCCCHHHHHHHHHHHhCCCCCCC
Confidence 9998652222111 1111100000 000000 1123467799999999999999999
Q ss_pred CHHHHHHHH
Q 042634 406 NMEEVAAQL 414 (427)
Q Consensus 406 t~~ev~~~L 414 (427)
+++++.+.+
T Consensus 285 ~~~~l~~~~ 293 (294)
T PHA02882 285 DYDALIKIF 293 (294)
T ss_pred CHHHHHHhh
Confidence 999999875
No 248
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.97 E-value=8.8e-32 Score=256.57 Aligned_cols=190 Identities=24% Similarity=0.295 Sum_probs=156.4
Q ss_pred cccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccc
Q 042634 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDL 260 (427)
Q Consensus 181 Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDl 260 (427)
|||||.+.+.+.. ....++|||+|.||.|++.+... .+++..+..++.|++.|++||| +.||+|||+
T Consensus 95 hpniv~l~~~~e~-----~~~~~lvmEL~~GGeLfd~i~~~-----~~sE~da~~~~~~il~av~~lH---~~gvvHrDl 161 (382)
T KOG0032|consen 95 HPNIVQLKDAFED-----PDSVYLVMELCEGGELFDRIVKK-----HYSERDAAGIIRQILEAVKYLH---SLGVVHRDL 161 (382)
T ss_pred CCCEEEEEEEEEc-----CCeEEEEEEecCCchHHHHHHHc-----cCCHHHHHHHHHHHHHHHHHHH---hCCceeccC
Confidence 9999999999544 56889999999999999998655 2899999999999999999999 899999999
Q ss_pred cCCceeeCC----CCceEecccccccccCCcC-----CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 261 KPSNVLLDG----ELTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 261 kp~NIll~~----~~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||+|+|+.. ++.+|++|||+|.....+. +||+.|+|||++...+|+..+||||+||++|.|++|.+||.+.
T Consensus 162 KpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~ 241 (382)
T KOG0032|consen 162 KPENLLLASKDEGSGRIKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGE 241 (382)
T ss_pred CHHHeeeccccCCCCcEEEeeCCCceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCC
Confidence 999999953 3589999999999887632 8999999999999999999999999999999999999999865
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
..... ........+ ++- ..........+.+++++|+..||.+|+|+.+++
T Consensus 242 ~~~~~-~~~i~~~~~-----~f~------------------------~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L 291 (382)
T KOG0032|consen 242 TEFEI-FLAILRGDF-----DFT------------------------SEPWDDISESAKDFIRKLLEFDPRKRLTAAQAL 291 (382)
T ss_pred ChhHH-HHHHHcCCC-----CCC------------------------CCCccccCHHHHHHHHHhcccCcccCCCHHHHh
Confidence 32221 111111111 000 012334567789999999999999999999999
Q ss_pred HH
Q 042634 412 AQ 413 (427)
Q Consensus 412 ~~ 413 (427)
++
T Consensus 292 ~H 293 (382)
T KOG0032|consen 292 QH 293 (382)
T ss_pred cC
Confidence 85
No 249
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=2.9e-31 Score=248.27 Aligned_cols=207 Identities=21% Similarity=0.214 Sum_probs=154.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+... .....++||||+++++|.+++.........+++..+..++.|++.||.||| ..|++|+
T Consensus 56 l~h~~iv~~~~~~~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH---~~~i~H~ 129 (287)
T cd06621 56 CKSPYIVKYYGAFLDE---SSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLH---SRKIIHR 129 (287)
T ss_pred CCCCCeeeeeeEEEcc---CCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccC
Confidence 5799999999876432 134578999999999998887543222245889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTG 334 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~ 334 (427)
||+|+||+++.++.+||+|||++...... ..++..|+|||.+.+..++.++||||+||++|||++|..||......
T Consensus 130 dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~ 209 (287)
T cd06621 130 DIKPSNILLTRKGQVKLCDFGVSGELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEP 209 (287)
T ss_pred CCCHHHEEEecCCeEEEeeccccccccccccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCC
Confidence 99999999999999999999998764432 25677899999999889999999999999999999999999754221
Q ss_pred CccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 042634 335 NLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQ 413 (427)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~ 413 (427)
.....+..............+. . ......+..+.+++.+||+.+|.+|||+.|+++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~-----~-----------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 210 PLGPIELLSYIVNMPNPELKDE-----P-----------------GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred CCChHHHHHHHhcCCchhhccC-----C-----------------CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 1111111111000000000000 0 0001134568899999999999999999999873
No 250
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.97 E-value=9.3e-32 Score=249.87 Aligned_cols=197 Identities=22% Similarity=0.367 Sum_probs=153.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhh-----hccCHHHHHHHHHHHHHHHHHHhhcCCC
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREAL-----KNLNLLQRLSIAVDVASALDYLHHYCET 253 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~-----~~l~~~~~~~~~~~i~~~L~~LH~~~~~ 253 (427)
++|||++++++.+.. ....++||||+++|+|.+++....... ..+++..+..++.|++.||+||| +.
T Consensus 65 l~h~~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~ 136 (275)
T cd05046 65 LSHKNVVRLLGLCRE-----AEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS---NA 136 (275)
T ss_pred cCCcceeeeEEEECC-----CCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhh---hc
Confidence 469999999987543 456799999999999999987543111 15899999999999999999999 89
Q ss_pred CeeeccccCCceeeCCCCceEecccccccccCC-------cCCCccccccccccCCCCcCccccchhHHHHHHHHHh-CC
Q 042634 254 PIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPE-------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GK 325 (427)
Q Consensus 254 ~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~-------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~ 325 (427)
+|+||||||+||+++.++.+|++|||+++.... ...++..|+|||.+.+..++.++|||||||++|++++ |.
T Consensus 137 ~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~ 216 (275)
T cd05046 137 RFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGE 216 (275)
T ss_pred CcccCcCccceEEEeCCCcEEEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999875432 1245667999999988889999999999999999998 88
Q ss_pred CCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC
Q 042634 326 RPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM 405 (427)
Q Consensus 326 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp 405 (427)
.||..... . ..+.......... ..+..++..+.+++.+||+.+|++||
T Consensus 217 ~p~~~~~~--~---~~~~~~~~~~~~~---------------------------~~~~~~~~~l~~~i~~~l~~~p~~Rp 264 (275)
T cd05046 217 LPFYGLSD--E---EVLNRLQAGKLEL---------------------------PVPEGCPSRLYKLMTRCWAVNPKDRP 264 (275)
T ss_pred CCccccch--H---HHHHHHHcCCcCC---------------------------CCCCCCCHHHHHHHHHHcCCCcccCC
Confidence 88864311 1 1111100000000 01122456789999999999999999
Q ss_pred CHHHHHHHHH
Q 042634 406 NMEEVAAQLL 415 (427)
Q Consensus 406 t~~ev~~~L~ 415 (427)
|+.|+++.|.
T Consensus 265 ~~~~~l~~l~ 274 (275)
T cd05046 265 SFSELVSALG 274 (275)
T ss_pred CHHHHHHHhc
Confidence 9999999875
No 251
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-32 Score=241.32 Aligned_cols=193 Identities=22% Similarity=0.300 Sum_probs=159.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+.|++|++|+++.. +...++|||||..|++.+.++.++ +.+++.++..+++.-+.||+||| ...-+||
T Consensus 85 C~S~yVVKYYGSYFK-----~sDLWIVMEYCGAGSiSDI~R~R~---K~L~E~EIs~iL~~TLKGL~YLH---~~~KIHR 153 (502)
T KOG0574|consen 85 CKSKYVVKYYGSYFK-----HSDLWIVMEYCGAGSISDIMRARR---KPLSEQEISAVLRDTLKGLQYLH---DLKKIHR 153 (502)
T ss_pred cCCchhhhhhhhhcc-----CCceEeehhhcCCCcHHHHHHHhc---CCccHHHHHHHHHHHHhHHHHHH---HHHHHHh
Confidence 457999999998433 567899999999999999997665 67999999999999999999999 6677999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC------CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
|||..|||++.+|.+||+|||+|..+...+ .||+.|||||++..-.|+.++||||+|++..||..|++||.+.-
T Consensus 154 DIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIH 233 (502)
T KOG0574|consen 154 DIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIH 233 (502)
T ss_pred hcccccEEEcccchhhhhhccccchhhhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccc
Confidence 999999999999999999999998775433 89999999999999999999999999999999999999997642
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
.-...+ .+| ..+......++.-+.++.+++++|+-..|++|.|+.++++
T Consensus 234 PMRAIF------MIP-------------------------T~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 234 PMRAIF------MIP-------------------------TKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred ccceeE------ecc-------------------------CCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 110000 000 0011112245666788999999999999999999999987
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
+
T Consensus 283 H 283 (502)
T KOG0574|consen 283 H 283 (502)
T ss_pred h
Confidence 5
No 252
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.97 E-value=9.8e-32 Score=250.91 Aligned_cols=213 Identities=19% Similarity=0.226 Sum_probs=149.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+. +....++++||++ ++|.+++.... ..+++..++.++.||++||.||| ..||+||
T Consensus 56 l~h~~i~~~~~~~~-----~~~~~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~ 123 (284)
T cd07839 56 LKHKNIVRLYDVLH-----SDKKLTLVFEYCD-QDLKKYFDSCN---GDIDPEIVKSFMFQLLKGLAFCH---SHNVLHR 123 (284)
T ss_pred cCCCCeeeHHHHhc-----cCCceEEEEecCC-CCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCEecC
Confidence 57999999999854 3567899999995 68877765432 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCC-CcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGS-EVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~-~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||+||+++.++.+||+|||.++..... ..++..|+|||++.+. .++.++|||||||++|||++|..||...
T Consensus 124 dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~ 203 (284)
T cd07839 124 DLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG 203 (284)
T ss_pred CCCHHHEEEcCCCcEEECccchhhccCCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCC
Confidence 99999999999999999999999865332 2557789999998764 4789999999999999999999886532
Q ss_pred cCCCccHHHHHHHhcccc------hhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC
Q 042634 332 FTGNLTLHNFVKEALPER------LAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM 405 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp 405 (427)
......+........... .....+... ... ......+ .......+.++.+++.+||+.||.+||
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~--~~~~~~~--~~~~~~~~~~~~~li~~~l~~~P~~R~ 273 (284)
T cd07839 204 NDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKP------YPM--YPATTSL--VNVVPKLNSTGRDLLQNLLVCNPVQRI 273 (284)
T ss_pred CCHHHHHHHHHHHhCCCChHHhHHhhhcccccc------cCC--CCCcchh--hhhcccCCHHHHHHHHHHhcCChhhcC
Confidence 221111111111100000 000000000 000 0000000 001122456788999999999999999
Q ss_pred CHHHHHHH
Q 042634 406 NMEEVAAQ 413 (427)
Q Consensus 406 t~~ev~~~ 413 (427)
|++|++++
T Consensus 274 t~~~il~h 281 (284)
T cd07839 274 SAEEALQH 281 (284)
T ss_pred CHHHHhcC
Confidence 99999763
No 253
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.97 E-value=1.3e-31 Score=249.97 Aligned_cols=195 Identities=23% Similarity=0.280 Sum_probs=149.4
Q ss_pred ccccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCC-Cee
Q 042634 178 FIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCET-PIV 256 (427)
Q Consensus 178 ll~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~-~iv 256 (427)
..+|||++++++.+.. +...+++|||++ |+|.+++.........+++..+..++.|++.||+||| ++ +++
T Consensus 56 ~~~~~~iv~~~~~~~~-----~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~~i~ 126 (283)
T cd06617 56 SVDCPYTVTFYGALFR-----EGDVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLH---SKLSVI 126 (283)
T ss_pred HcCCCCeeeeeEEEec-----CCcEEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---hcCCee
Confidence 3679999999998643 456899999994 7887777543222256899999999999999999999 66 999
Q ss_pred eccccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCC----CCcCccccchhHHHHHHHHHhCCCC
Q 042634 257 HCDLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMG----SEVSTSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 257 HrDlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~----~~~~~~~DiwS~G~vl~ell~g~~p 327 (427)
||||||+||+++.++.+||+|||.++..... ..++..|+|||.+.+ ..++.++|+|||||++|||++|+.|
T Consensus 127 h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p 206 (283)
T cd06617 127 HRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFP 206 (283)
T ss_pred cCCCCHHHEEECCCCCEEEeecccccccccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCC
Confidence 9999999999999999999999999865432 256778999998865 4468899999999999999999999
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
|.........+...... . . ........+.++.+++.+||+.+|++|||+
T Consensus 207 ~~~~~~~~~~~~~~~~~-~--------~----------------------~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~ 255 (283)
T cd06617 207 YDSWKTPFQQLKQVVEE-P--------S----------------------PQLPAEKFSPEFQDFVNKCLKKNYKERPNY 255 (283)
T ss_pred CCccccCHHHHHHHHhc-C--------C----------------------CCCCccccCHHHHHHHHHHccCChhhCcCH
Confidence 86421111111110000 0 0 000112245678999999999999999999
Q ss_pred HHHHH
Q 042634 408 EEVAA 412 (427)
Q Consensus 408 ~ev~~ 412 (427)
+|+++
T Consensus 256 ~~il~ 260 (283)
T cd06617 256 PELLQ 260 (283)
T ss_pred HHHhc
Confidence 99987
No 254
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.97 E-value=1.7e-31 Score=245.45 Aligned_cols=193 Identities=20% Similarity=0.295 Sum_probs=154.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|+||+++++.+.. ....+++|||+++++|.+++..... ..+++..+..++.|++.|+.||| +.|++||
T Consensus 56 ~~h~~i~~~~~~~~~-----~~~~~~~~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~ 125 (256)
T cd08221 56 LQHPNIIAYYNHFMD-----DNTLLIEMEYANGGTLYDKIVRQKG--QLFEEEMVLWYLFQIVSAVSYIH---KAGILHR 125 (256)
T ss_pred CCCCCeeEEEeEEec-----CCeEEEEEEecCCCcHHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHH---hCCcccc
Confidence 469999999998543 5678999999999999999875432 45889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||++++++.+||+|||.++..... ..++..|+|||+..+..++.++|||||||++|||++|..||....
T Consensus 126 dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~ 205 (256)
T cd08221 126 DIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATN 205 (256)
T ss_pred CCChHhEEEeCCCCEEECcCcceEEcccccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCC
Confidence 99999999999999999999999865332 257889999999988889999999999999999999999986421
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
..+............ .+..++.++.+++.+||+.+|++|||++|+++
T Consensus 206 -----~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~ 252 (256)
T cd08221 206 -----PLNLVVKIVQGNYTP----------------------------VVSVYSSELISLVHSLLQQDPEKRPTADEVLD 252 (256)
T ss_pred -----HHHHHHHHHcCCCCC----------------------------CccccCHHHHHHHHHHcccCcccCCCHHHHhh
Confidence 111111111110000 11234566889999999999999999999987
Q ss_pred HH
Q 042634 413 QL 414 (427)
Q Consensus 413 ~L 414 (427)
.+
T Consensus 253 ~~ 254 (256)
T cd08221 253 QP 254 (256)
T ss_pred Cc
Confidence 53
No 255
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.97 E-value=3.9e-32 Score=262.36 Aligned_cols=141 Identities=24% Similarity=0.334 Sum_probs=125.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||+|+++++.+. .....++||||+++|+|.+++... ..+++..++.++.|++.||+||| +.||+||
T Consensus 58 l~~~~iv~~~~~~~-----~~~~~~lv~E~~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~~L~~lH---~~givHr 125 (360)
T cd05627 58 ADGAWVVKMFYSFQ-----DKRNLYLIMEFLPGGDMMTLLMKK----DTLSEEATQFYIAETVLAIDAIH---QLGFIHR 125 (360)
T ss_pred CCCCCEeeEEEEEE-----cCCEEEEEEeCCCCccHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEcc
Confidence 47999999998743 366789999999999999998654 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC-----------------------------------------cCCCccccccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE-----------------------------------------ATNNFFNFQIA 297 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~-----------------------------------------~~~~~~~y~aP 297 (427)
||||+|||++.++.+||+|||+++.... ...||+.|+||
T Consensus 126 DLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 205 (360)
T cd05627 126 DIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAP 205 (360)
T ss_pred CCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCH
Confidence 9999999999999999999999875421 12588899999
Q ss_pred cccCCCCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 298 EYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 298 E~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
|++.+..++.++|||||||++|||++|+.||...
T Consensus 206 E~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~ 239 (360)
T cd05627 206 EVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSE 239 (360)
T ss_pred HHHcCCCCCCcceeccccceeeecccCCCCCCCC
Confidence 9999999999999999999999999999999753
No 256
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.97 E-value=1.9e-31 Score=245.95 Aligned_cols=199 Identities=22% Similarity=0.271 Sum_probs=156.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcC--CCCee
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYC--ETPIV 256 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~--~~~iv 256 (427)
++|||++++++.+.. ..+...+++|||+++++|.+++.........+++..++.++.|++.||+|||..+ +.+++
T Consensus 56 l~~~~i~~~~~~~~~---~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~ 132 (265)
T cd08217 56 LKHPNIVRYYDRIID---RSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVL 132 (265)
T ss_pred cCCCccceeeeeeec---CCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcce
Confidence 579999999886533 2244578999999999999998754333356899999999999999999999443 57899
Q ss_pred eccccCCceeeCCCCceEecccccccccCCcC------CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 257 HCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 257 HrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
|+||||+||+++.++.+||+|||.+....... .++..|+|||.+.+..++.++||||||+++|+|++|..||..
T Consensus 133 h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 212 (265)
T cd08217 133 HRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTA 212 (265)
T ss_pred ecCCCHHHEEEecCCCEEEecccccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccC
Confidence 99999999999999999999999998764432 577889999999988899999999999999999999999975
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
.. ...+.+.+.... .. ..+...+.++.+++.+||+.+|++|||++||
T Consensus 213 ~~--~~~~~~~~~~~~---~~----------------------------~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~i 259 (265)
T cd08217 213 RN--QLQLASKIKEGK---FR----------------------------RIPYRYSSELNEVIKSMLNVDPDKRPSTEEL 259 (265)
T ss_pred cC--HHHHHHHHhcCC---CC----------------------------CCccccCHHHHHHHHHHccCCcccCCCHHHH
Confidence 32 111111111000 00 0122345678999999999999999999999
Q ss_pred HHH
Q 042634 411 AAQ 413 (427)
Q Consensus 411 ~~~ 413 (427)
+++
T Consensus 260 l~~ 262 (265)
T cd08217 260 LQL 262 (265)
T ss_pred hhC
Confidence 864
No 257
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.97 E-value=1.2e-31 Score=248.83 Aligned_cols=200 Identities=23% Similarity=0.239 Sum_probs=153.0
Q ss_pred cccccchhhhccccccCC-CCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 179 IRHRNLVKIITSCASVDF-QGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
..|||++++++.+..... ..+...++||||+++++|.+++.........+++..+..++.|++.||+||| +.|++|
T Consensus 60 ~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H 136 (275)
T cd06608 60 SNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLH---ENKVIH 136 (275)
T ss_pred cCCCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHh---cCCccc
Confidence 369999999998755332 2345679999999999999988654322356899999999999999999999 899999
Q ss_pred ccccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCC-----CCcCccccchhHHHHHHHHHhCCC
Q 042634 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMG-----SEVSTSGDVYSFGILLLETFTGKR 326 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~-----~~~~~~~DiwS~G~vl~ell~g~~ 326 (427)
+||+|+||+++.++.+||+|||.+...... ..++..|+|||++.. ..++.++|||||||++||+++|..
T Consensus 137 ~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~ 216 (275)
T cd06608 137 RDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKP 216 (275)
T ss_pred CCCCHHHEEEccCCeEEECCCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCC
Confidence 999999999999999999999998765332 257788999998754 346789999999999999999999
Q ss_pred CCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC
Q 042634 327 PTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN 406 (427)
Q Consensus 327 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt 406 (427)
||...... ....+. .... .+ ....+...+.++.+++.+||..||++|||
T Consensus 217 p~~~~~~~-~~~~~~----~~~~-----~~---------------------~~~~~~~~~~~~~~li~~~l~~dp~~Rpt 265 (275)
T cd06608 217 PLCDMHPM-RALFKI----PRNP-----PP---------------------TLKSPENWSKKFNDFISECLIKNYEQRPF 265 (275)
T ss_pred CccccchH-HHHHHh----hccC-----CC---------------------CCCchhhcCHHHHHHHHHHhhcChhhCcC
Confidence 99643111 001100 0000 00 00012234567899999999999999999
Q ss_pred HHHHHH
Q 042634 407 MEEVAA 412 (427)
Q Consensus 407 ~~ev~~ 412 (427)
++|+++
T Consensus 266 ~~~ll~ 271 (275)
T cd06608 266 MEELLE 271 (275)
T ss_pred HHHHhc
Confidence 999986
No 258
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-31 Score=255.43 Aligned_cols=192 Identities=21% Similarity=0.270 Sum_probs=153.0
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecc
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrD 259 (427)
+||+||++++.+.. .+..++..|||.||-+...+..-. ..+++.++..+++|++.||.||| +.+|+|||
T Consensus 87 dHP~ivkLl~ayy~-----enkLwiliEFC~GGAVDaimlEL~---r~LtE~QIqvvc~q~ldALn~LH---s~~iIHRD 155 (1187)
T KOG0579|consen 87 DHPVIVKLLSAYYF-----ENKLWILIEFCGGGAVDAIMLELG---RVLTEDQIQVVCYQVLDALNWLH---SQNIIHRD 155 (1187)
T ss_pred CChHHHHHHHHHhc-----cCceEEEEeecCCchHhHHHHHhc---cccchHHHHHHHHHHHHHHHHHh---hcchhhhh
Confidence 59999999998433 567899999999999988775543 56999999999999999999999 99999999
Q ss_pred ccCCceeeCCCCceEecccccccccC------CcCCCccccccccccC-----CCCcCccccchhHHHHHHHHHhCCCCC
Q 042634 260 LKPSNVLLDGELTAHVGDFGLAKFLP------EATNNFFNFQIAEYGM-----GSEVSTSGDVYSFGILLLETFTGKRPT 328 (427)
Q Consensus 260 lkp~NIll~~~~~~kL~DFG~a~~~~------~~~~~~~~y~aPE~~~-----~~~~~~~~DiwS~G~vl~ell~g~~pf 328 (427)
||+.|||++-+|.++|+|||++.... ....||+.|||||+.+ ..+|++++||||||+++.||..+.+|.
T Consensus 156 LKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPH 235 (1187)
T KOG0579|consen 156 LKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPH 235 (1187)
T ss_pred ccccceEEEecCcEeeecccccccchhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCc
Confidence 99999999999999999999987543 2338999999999875 467999999999999999999999997
Q ss_pred CcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 329 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
..... +...-.+...-|+ ....|..-...|.+++.+|+..||..||+++
T Consensus 236 helnp--MRVllKiaKSePP-----------------------------TLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aa 284 (1187)
T KOG0579|consen 236 HELNP--MRVLLKIAKSEPP-----------------------------TLLQPSHWSRSFSDFLKRCLVKNPRNRPPAA 284 (1187)
T ss_pred cccch--HHHHHHHhhcCCC-----------------------------cccCcchhhhHHHHHHHHHHhcCCccCCCHH
Confidence 65311 0000000111111 1112333456789999999999999999999
Q ss_pred HHHHH
Q 042634 409 EVAAQ 413 (427)
Q Consensus 409 ev~~~ 413 (427)
+++++
T Consensus 285 qll~H 289 (1187)
T KOG0579|consen 285 QLLKH 289 (1187)
T ss_pred HHhhC
Confidence 99864
No 259
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.97 E-value=2.3e-31 Score=250.13 Aligned_cols=191 Identities=21% Similarity=0.310 Sum_probs=151.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. +...++++||+++++|.+++.. ..+++..+..++.|++.||+||| +.|++||
T Consensus 75 l~hp~i~~~~~~~~~-----~~~~~iv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~ 141 (297)
T cd06659 75 YQHQNVVEMYKSYLV-----GEELWVLMEFLQGGALTDIVSQ-----TRLNEEQIATVCESVLQALCYLH---SQGVIHR 141 (297)
T ss_pred CCCCchhhhhhheee-----CCeEEEEEecCCCCCHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHH---hCCeecC
Confidence 579999999998543 5678999999999999887743 34889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||++...... ..++..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 142 dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~ 221 (297)
T cd06659 142 DIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDS 221 (297)
T ss_pred CCCHHHeEEccCCcEEEeechhHhhcccccccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999998754332 257788999999998889999999999999999999999986421
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
................ ......+..+.+++.+||+.+|++|||++|+++
T Consensus 222 --~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 222 --PVQAMKRLRDSPPPKL-----------------------------KNAHKISPVLRDFLERMLTREPQERATAQELLD 270 (297)
T ss_pred --HHHHHHHHhccCCCCc-----------------------------cccCCCCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 1111111110000000 011123455789999999999999999999998
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
.
T Consensus 271 ~ 271 (297)
T cd06659 271 H 271 (297)
T ss_pred C
Confidence 5
No 260
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.97 E-value=1.7e-31 Score=245.33 Aligned_cols=192 Identities=27% Similarity=0.457 Sum_probs=151.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
+.|||++++++.+.. ....+++|||+++++|.+++.... ..+++..+..++.|++.|++||| +.+++||
T Consensus 56 l~~~~i~~~~~~~~~-----~~~~~~v~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~ 124 (256)
T cd05112 56 LSHPKLVQLYGVCTE-----RSPICLVFEFMEHGCLSDYLRAQR---GKFSQETLLGMCLDVCEGMAYLE---SSNVIHR 124 (256)
T ss_pred CCCCCeeeEEEEEcc-----CCceEEEEEcCCCCcHHHHHHhCc---cCCCHHHHHHHHHHHHHHHHHHH---HCCcccc
Confidence 469999999887533 456799999999999999886543 34788999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC-------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT-------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~-------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~ 330 (427)
||||+||+++.++.+||+|||.++...... .++..|+|||.+.+..++.++|||||||++||+++ |..||..
T Consensus 125 dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~ 204 (256)
T cd05112 125 DLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYEN 204 (256)
T ss_pred ccccceEEEcCCCeEEECCCcceeecccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCc
Confidence 999999999999999999999987653321 34467999999988889999999999999999998 9999864
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
... ....... . +.... ..+...+..+.+++.+||+.+|++|||+.|+
T Consensus 205 ~~~-----~~~~~~~-~----~~~~~-----------------------~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~ 251 (256)
T cd05112 205 RSN-----SEVVETI-N----AGFRL-----------------------YKPRLASQSVYELMQHCWKERPEDRPSFSLL 251 (256)
T ss_pred CCH-----HHHHHHH-h----CCCCC-----------------------CCCCCCCHHHHHHHHHHcccChhhCCCHHHH
Confidence 311 1111110 0 00000 0011124568999999999999999999999
Q ss_pred HHHH
Q 042634 411 AAQL 414 (427)
Q Consensus 411 ~~~L 414 (427)
++.|
T Consensus 252 l~~l 255 (256)
T cd05112 252 LHQL 255 (256)
T ss_pred HHhh
Confidence 9886
No 261
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.97 E-value=1.7e-31 Score=250.50 Aligned_cols=192 Identities=20% Similarity=0.242 Sum_probs=148.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. +...++||||+++++|..++.+.. ..+++..+..++.|++.|++||| +.||+||
T Consensus 66 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~l~~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~ 134 (292)
T cd06644 66 CNHPYIVKLLGAFYW-----DGKLWIMIEFCPGGAVDAIMLELD---RGLTEPQIQVICRQMLEALQYLH---SMKIIHR 134 (292)
T ss_pred CCCCcEeeeEEEEEe-----CCeEEEEEecCCCCcHHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHh---cCCeeec
Confidence 579999999987543 457899999999999988775432 35889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccC-----CCCcCccccchhHHHHHHHHHhCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGM-----GSEVSTSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~-----~~~~~~~~DiwS~G~vl~ell~g~~p 327 (427)
||||+||+++.++.+||+|||.+...... ..++..|+|||++. ...++.++|||||||++|||++|+.|
T Consensus 135 dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p 214 (292)
T cd06644 135 DLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 214 (292)
T ss_pred CCCcceEEEcCCCCEEEccCccceeccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCC
Confidence 99999999999999999999998754322 25677899999985 34468899999999999999999999
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
|..... ............... ..+...+.++.+++.+||+.+|++|||+
T Consensus 215 ~~~~~~-----~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~ 263 (292)
T cd06644 215 HHELNP-----MRVLLKIAKSEPPTL--------------------------SQPSKWSMEFRDFLKTALDKHPETRPSA 263 (292)
T ss_pred CccccH-----HHHHHHHhcCCCccC--------------------------CCCcccCHHHHHHHHHHhcCCcccCcCH
Confidence 865311 011111000000000 0112234568899999999999999999
Q ss_pred HHHHH
Q 042634 408 EEVAA 412 (427)
Q Consensus 408 ~ev~~ 412 (427)
+|+++
T Consensus 264 ~~il~ 268 (292)
T cd06644 264 AQLLE 268 (292)
T ss_pred HHHhc
Confidence 99976
No 262
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=7.5e-32 Score=253.46 Aligned_cols=190 Identities=18% Similarity=0.238 Sum_probs=151.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. +...++||||+++++|.+++.+ ..+++.++..++.|++.||.||| +.|++||
T Consensus 73 ~~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~l~~~L~~LH---~~~i~H~ 139 (297)
T cd06656 73 NKNPNIVNYLDSYLV-----GDELWVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALDFLH---SNQVIHR 139 (297)
T ss_pred CCCCCEeeEEEEEec-----CCEEEEeecccCCCCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccC
Confidence 679999999988543 5678999999999999998854 23788899999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||.+...... ..++..|+|||.+.+..++.++|||||||++|++++|+.||....
T Consensus 140 dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~ 219 (297)
T cd06656 140 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNEN 219 (297)
T ss_pred CCCHHHEEECCCCCEEECcCccceEccCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999998765332 256778999999998889999999999999999999999996531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
...... ...... . .....+...+..+.+++.+||+.+|++|||++|+++
T Consensus 220 ~~~~~~-~~~~~~---------~---------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 220 PLRALY-LIATNG---------T---------------------PELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred cchhee-eeccCC---------C---------------------CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 110000 000000 0 000012234556789999999999999999999987
No 263
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.97 E-value=1.5e-31 Score=246.08 Aligned_cols=195 Identities=29% Similarity=0.405 Sum_probs=152.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++++|.+++... ..+++..+..++.|+++||+||| +.||+||
T Consensus 55 l~~~~i~~~~~~~~~-----~~~~~~v~~~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~L~~Lh---~~~i~H~ 122 (260)
T PF00069_consen 55 LRHPNIVQILDVFQD-----DNYLYIVMEYCPGGSLQDYLQKN----KPLSEEEILKIAYQILEALAYLH---SKGIVHR 122 (260)
T ss_dssp HTBTTBCHEEEEEEE-----SSEEEEEEEEETTEBHHHHHHHH----SSBBHHHHHHHHHHHHHHHHHHH---HTTEEES
T ss_pred ccccccccccccccc-----ccccccccccccccccccccccc----ccccccccccccccccccccccc---ccccccc
Confidence 469999999988554 56788999999998999998722 55899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccC------CcCCCccccccccccC-CCCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLP------EATNNFFNFQIAEYGM-GSEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~------~~~~~~~~y~aPE~~~-~~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||+||+++.++.+||+|||.+.... ....++..|+|||+.. +..++.++||||+|+++|+|++|..||...
T Consensus 123 dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~ 202 (260)
T PF00069_consen 123 DIKPENILLDENGEVKLIDFGSSVKLSENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEES 202 (260)
T ss_dssp SBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999999999997531 1236788999999998 788999999999999999999999999764
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
. ..................... .......++.+++.+||+.||++|||++|++
T Consensus 203 ~--~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~ 255 (260)
T PF00069_consen 203 N--SDDQLEIIEKILKRPLPSSSQ-------------------------QSREKSEELRDLIKKMLSKDPEQRPSAEELL 255 (260)
T ss_dssp S--HHHHHHHHHHHHHTHHHHHTT-------------------------SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHH
T ss_pred c--chhhhhhhhhccccccccccc-------------------------ccchhHHHHHHHHHHHccCChhHCcCHHHHh
Confidence 1 001111111111000000000 0011126789999999999999999999998
Q ss_pred H
Q 042634 412 A 412 (427)
Q Consensus 412 ~ 412 (427)
+
T Consensus 256 ~ 256 (260)
T PF00069_consen 256 K 256 (260)
T ss_dssp T
T ss_pred c
Confidence 5
No 264
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.97 E-value=1.3e-31 Score=247.64 Aligned_cols=191 Identities=21% Similarity=0.283 Sum_probs=147.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ..+...++++||+++++|.+++... ..+++..++.++.|++.||+||| +.+|+||
T Consensus 61 l~h~~i~~~~~~~~~---~~~~~~~l~~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~~l~~LH---~~~i~H~ 130 (266)
T cd06651 61 LQHERIVQYYGCLRD---RAEKTLTIFMEYMPGGSVKDQLKAY----GALTESVTRKYTRQILEGMSYLH---SNMIVHR 130 (266)
T ss_pred cCCCCeeeEEEEEEc---CCCCEEEEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeeC
Confidence 579999999886432 1134678999999999999988654 34888999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc---------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA---------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~---------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~ 329 (427)
||||+||+++.++.+||+|||+++..... ..++..|+|||++.+..++.++|||||||++||+++|+.||.
T Consensus 131 ~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~ 210 (266)
T cd06651 131 DIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWA 210 (266)
T ss_pred CCCHHHEEECCCCCEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCcc
Confidence 99999999999999999999998754321 246778999999998889999999999999999999999997
Q ss_pred cccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 330 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
.... ... ........ .. ...+...++.+.+++ +||..+|++|||++|
T Consensus 211 ~~~~----~~~-~~~~~~~~----~~-----------------------~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~e 257 (266)
T cd06651 211 EYEA----MAA-IFKIATQP----TN-----------------------PQLPSHISEHARDFL-GCIFVEARHRPSAEE 257 (266)
T ss_pred ccch----HHH-HHHHhcCC----CC-----------------------CCCchhcCHHHHHHH-HHhcCChhhCcCHHH
Confidence 5311 110 11000000 00 001223345566677 688899999999999
Q ss_pred HHH
Q 042634 410 VAA 412 (427)
Q Consensus 410 v~~ 412 (427)
|++
T Consensus 258 il~ 260 (266)
T cd06651 258 LLR 260 (266)
T ss_pred Hhc
Confidence 975
No 265
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.97 E-value=4.1e-32 Score=234.95 Aligned_cols=193 Identities=22% Similarity=0.254 Sum_probs=149.8
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecc
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrD 259 (427)
+.|.||+.++++.. +....+.||.| ..-+..+++.- +.++++..+-++...++.||.||.+ .+||+|||
T Consensus 149 dcpyIV~c~GyFi~-----n~dV~IcMelM-s~C~ekLlkri---k~piPE~ilGk~tva~v~AL~YLKe--KH~viHRD 217 (391)
T KOG0983|consen 149 DCPYIVQCFGYFIT-----NTDVFICMELM-STCAEKLLKRI---KGPIPERILGKMTVAIVKALYYLKE--KHGVIHRD 217 (391)
T ss_pred CCCeeeeeeeEEee-----CchHHHHHHHH-HHHHHHHHHHh---cCCchHHhhhhhHHHHHHHHHHHHH--hcceeecc
Confidence 36999999998544 66788999988 44455555432 2568888888999999999999997 78999999
Q ss_pred ccCCceeeCCCCceEecccccccccCCcC-----CCccccccccccCC---CCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 260 LKPSNVLLDGELTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGMG---SEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 260 lkp~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~~---~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
+||+|||+|+.|.+|+||||++..+.+.. +|.+.|||||.+.- ..|+.++||||||++++|+.||..||.+.
T Consensus 218 vKPSNILlDe~GniKlCDFGIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c 297 (391)
T KOG0983|consen 218 VKPSNILLDERGNIKLCDFGISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGC 297 (391)
T ss_pred cCccceEEccCCCEEeecccccceeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCC
Confidence 99999999999999999999998775543 78889999999864 46899999999999999999999999864
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
..+-..+..... ..|+.+.. ....+..|.+++..|+..|+.+||.-.+++
T Consensus 298 ~tdFe~ltkvln-~ePP~L~~-----------------------------~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll 347 (391)
T KOG0983|consen 298 KTDFEVLTKVLN-EEPPLLPG-----------------------------HMGFSPDFQSFVKDCLTKDHRKRPKYNKLL 347 (391)
T ss_pred CccHHHHHHHHh-cCCCCCCc-----------------------------ccCcCHHHHHHHHHHhhcCcccCcchHHHh
Confidence 322222222221 22221110 011355689999999999999999999988
Q ss_pred HH
Q 042634 412 AQ 413 (427)
Q Consensus 412 ~~ 413 (427)
++
T Consensus 348 ~h 349 (391)
T KOG0983|consen 348 EH 349 (391)
T ss_pred cC
Confidence 64
No 266
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.97 E-value=1.3e-31 Score=250.23 Aligned_cols=219 Identities=19% Similarity=0.203 Sum_probs=149.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. +...++||||++ ++|.+++..... ...+++..+..++.|++.||+||| +.||+||
T Consensus 56 l~h~~i~~~~~~~~~-----~~~~~~v~e~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~ 125 (285)
T cd07861 56 LQHPNIVCLQDVLMQ-----ESRLYLIFEFLS-MDLKKYLDSLPK-GQYMDAELVKSYLYQILQGILFCH---SRRVLHR 125 (285)
T ss_pred cCCCCEeeeEEEEee-----CCeEEEEEecCC-CCHHHHHhcCCC-CCcCCHHHHHHHHHHHHHHHHHHH---hCCeeec
Confidence 459999999998543 567899999996 688888754322 145899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||+||+++.++.+||+|||++...... ..++..|+|||++.+ ..++.++|||||||++|||++|+.||.+.
T Consensus 126 dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~ 205 (285)
T cd07861 126 DLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGD 205 (285)
T ss_pred CCCHHHEEEcCCCcEEECcccceeecCCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 99999999999999999999998754322 245778999998865 45789999999999999999999999753
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
.... ............ ................. ................+.++.+++.+||+.||++|||+.||+
T Consensus 206 ~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll 280 (285)
T cd07861 206 SEID-QLFRIFRILGTP-TEDVWPGVTSLPDYKNT---FPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKAL 280 (285)
T ss_pred CHHH-HHHHHHHHhCCC-ChhhhhcchhhHHHHhh---ccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHh
Confidence 2111 111111100000 00000000000000000 000000000001112456788999999999999999999997
Q ss_pred H
Q 042634 412 A 412 (427)
Q Consensus 412 ~ 412 (427)
.
T Consensus 281 ~ 281 (285)
T cd07861 281 N 281 (285)
T ss_pred c
Confidence 5
No 267
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.97 E-value=1.4e-31 Score=252.11 Aligned_cols=215 Identities=20% Similarity=0.255 Sum_probs=150.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||++ ++|.+++.... ..+++..+..++.|++.||+||| +.||+||
T Consensus 61 l~h~nI~~~~~~~~~-----~~~~~lv~e~~~-~~l~~~l~~~~---~~~~~~~~~~~~~qi~~aL~~lH---~~~i~H~ 128 (301)
T cd07873 61 LKHANIVTLHDIIHT-----EKSLTLVFEYLD-KDLKQYLDDCG---NSINMHNVKLFLFQLLRGLNYCH---RRKVLHR 128 (301)
T ss_pred cCCCCcceEEEEEec-----CCeEEEEEeccc-cCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCC
Confidence 479999999998543 567899999995 68888876543 35888999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||+||+++.++.+||+|||+++..... ..++..|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 129 dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~ 208 (301)
T cd07873 129 DLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGS 208 (301)
T ss_pred CCCHHHEEECCCCcEEECcCcchhccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999999764321 256778999998865 45788999999999999999999999753
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccc---cchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRS---FSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
... .....+........................ ..+..... ......+..+.+++.+|++.||.+|||++
T Consensus 209 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~ 281 (301)
T cd07873 209 TVE--EQLHFIFRILGTPTEETWPGILSNEEFKSY-----NYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAE 281 (301)
T ss_pred CHH--HHHHHHHHHcCCCChhhchhhhcccccccc-----ccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHH
Confidence 211 111111111111111111111000000000 00000000 01122355688999999999999999999
Q ss_pred HHHH
Q 042634 409 EVAA 412 (427)
Q Consensus 409 ev~~ 412 (427)
|+++
T Consensus 282 eil~ 285 (301)
T cd07873 282 EAMK 285 (301)
T ss_pred HHhc
Confidence 9987
No 268
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.97 E-value=2e-31 Score=249.05 Aligned_cols=195 Identities=22% Similarity=0.256 Sum_probs=150.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|++++.+.+.+.. +...+++|||+++++|.+++..... ..+++..+..++.|++.||.||| +.||+||
T Consensus 57 l~~~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH---~~~iiH~ 126 (285)
T cd05632 57 VNSQFVVNLAYAYET-----KDALCLVLTIMNGGDLKFHIYNMGN--PGFEEERALFYAAEILCGLEDLH---RENTVYR 126 (285)
T ss_pred cCCcCceeEEEEEec-----CCEEEEEEEeccCccHHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeec
Confidence 569999998777433 5678999999999999888754321 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
||||+||++++++.+||+|||++...... ..|+..|+|||++.+..++.++|||||||++||+++|..||.....
T Consensus 127 dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~ 206 (285)
T cd05632 127 DLKPENILLDDYGHIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKE 206 (285)
T ss_pred CCCHHHEEECCCCCEEEecCCcceecCCCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH
Confidence 99999999999999999999999765322 2678899999999988999999999999999999999999975311
Q ss_pred CCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC-----HH
Q 042634 334 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN-----ME 408 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt-----~~ 408 (427)
.. ....+.......... .+...+.++.+++.+||+.||++||| ++
T Consensus 207 ~~--~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~ 256 (285)
T cd05632 207 KV--KREEVDRRVLETEEV----------------------------YSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAG 256 (285)
T ss_pred HH--HHHHHHHhhhccccc----------------------------cCccCCHHHHHHHHHHccCCHhHcCCCcccChH
Confidence 10 001111111000000 11123456789999999999999999 66
Q ss_pred HHHHH
Q 042634 409 EVAAQ 413 (427)
Q Consensus 409 ev~~~ 413 (427)
|++..
T Consensus 257 ~l~~~ 261 (285)
T cd05632 257 EVKRH 261 (285)
T ss_pred HHHcC
Confidence 66653
No 269
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.97 E-value=4.1e-31 Score=244.06 Aligned_cols=197 Identities=24% Similarity=0.309 Sum_probs=155.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCC-CCeee
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCE-TPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~-~~ivH 257 (427)
++||||+++++.+.. ....++++||+++++|.+++.... ..+++..+..++.|++.|++|+| + .|++|
T Consensus 56 ~~~~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lH---~~~~i~H 124 (265)
T cd06605 56 CNSPYIVGFYGAFYN-----NGDISICMEYMDGGSLDKILKEVQ---GRIPERILGKIAVAVLKGLTYLH---EKHKIIH 124 (265)
T ss_pred CCCCchhhhheeeec-----CCEEEEEEEecCCCcHHHHHHHcc---CCCCHHHHHHHHHHHHHHHHHHc---CCCCeec
Confidence 459999999988544 467899999999999999987543 45889999999999999999999 7 99999
Q ss_pred ccccCCceeeCCCCceEecccccccccCCc----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEA----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
|||||+||+++.++.+||+|||.+...... ..++..|+|||++.+..++.++|||||||++|++++|+.||.....
T Consensus 125 ~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~ 204 (265)
T cd06605 125 RDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPEND 204 (265)
T ss_pred CCCCHHHEEECCCCCEEEeecccchhhHHHHhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccc
Confidence 999999999999999999999998765322 3677889999999999999999999999999999999999975422
Q ss_pred CCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 042634 334 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQ 413 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~ 413 (427)
......+.......... ........+.++.+++.+||..||++|||+.|++..
T Consensus 205 ~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 205 PPDGIFELLQYIVNEPP---------------------------PRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred ccccHHHHHHHHhcCCC---------------------------CCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 21222222111111000 000111256678999999999999999999999853
No 270
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=1.6e-31 Score=249.49 Aligned_cols=204 Identities=22% Similarity=0.264 Sum_probs=154.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++++|.+++... ..+++..+..++.|++.||.|||+ ..+++||
T Consensus 60 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~ 128 (284)
T cd06620 60 CRSPYIVSFYGAFLN-----ENNICMCMEFMDCGSLDRIYKKG----GPIPVEILGKIAVAVVEGLTYLYN--VHRIMHR 128 (284)
T ss_pred cCCCCcceEeeeEec-----CCEEEEEEecCCCCCHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHH--hcCeecc
Confidence 579999999988544 46789999999999999887653 358899999999999999999994 3689999
Q ss_pred cccCCceeeCCCCceEecccccccccCC----cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE----ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTG 334 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~ 334 (427)
||||+||+++.++.++|+|||++..... ...++..|+|||++.+..++.++|||||||++||+++|+.||......
T Consensus 129 dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~ 208 (284)
T cd06620 129 DIKPSNILVNSRGQIKLCDFGVSGELINSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNID 208 (284)
T ss_pred CCCHHHEEECCCCcEEEccCCcccchhhhccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchh
Confidence 9999999999999999999999875432 226788999999998888999999999999999999999999754221
Q ss_pred CccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 042634 335 NLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQL 414 (427)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~L 414 (427)
...- ..+..+.+.+...... .........++.++.+++.+||+.||++|||++|++++.
T Consensus 209 ~~~~------~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 209 DDGQ------DDPMGILDLLQQIVQE---------------PPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred hhhh------hhhhHHHHHHHHHhhc---------------cCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 1000 0000000000000000 000011123566789999999999999999999999864
No 271
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.97 E-value=2.2e-31 Score=253.83 Aligned_cols=232 Identities=18% Similarity=0.240 Sum_probs=155.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++++.. +...++||||+.++++.+++..... ..+++..+..++.|++.||+||| +.||+||
T Consensus 56 l~h~niv~~~~~~~~-----~~~~~~v~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~qi~~aL~~lH---~~~ivHr 125 (328)
T cd08226 56 FRHPNIMTSWTVFTT-----GSWLWVISPFMAYGSANSLLKTYFP--EGMSEALIGNILFGALRGLNYLH---QNGYIHR 125 (328)
T ss_pred CCCCCcceEeeeEec-----CCceEEEEecccCCCHHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHH---hCCeecC
Confidence 679999999998544 5678999999999999998875432 34889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-------------CCCccccccccccCCC--CcCccccchhHHHHHHHHHh
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-------------TNNFFNFQIAEYGMGS--EVSTSGDVYSFGILLLETFT 323 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-------------~~~~~~y~aPE~~~~~--~~~~~~DiwS~G~vl~ell~ 323 (427)
||||+||+++.++.+|++||+.+...... ..++..|+|||++.+. .++.++|||||||++|||++
T Consensus 126 Dlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~ 205 (328)
T cd08226 126 NIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELAT 205 (328)
T ss_pred CCCHHHEEEeCCCcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHh
Confidence 99999999999999999999865432111 1234569999998763 47899999999999999999
Q ss_pred CCCCCCcccCCCccHHHHHHHhcccc--------hhcccCccccccccccchhhh-----ccccccccccchHHHHHHHH
Q 042634 324 GKRPTNEMFTGNLTLHNFVKEALPER--------LAEIVDPVLLVEREEGETSKA-----NAHKQFTRSFSVKECLVSVL 390 (427)
Q Consensus 324 g~~pf~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 390 (427)
|+.||...................+. .....+.....+......... ..............++..+.
T Consensus 206 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (328)
T cd08226 206 GRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQ 285 (328)
T ss_pred CCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHH
Confidence 99999764221111100000000000 000000000000000000000 00000011122345678899
Q ss_pred HHHhhcCCCCCCCCCCHHHHHHH--HHHHHHH
Q 042634 391 GIGVTCSSELPRERMNMEEVAAQ--LLSFRNK 420 (427)
Q Consensus 391 ~l~~~cl~~dP~~Rpt~~ev~~~--L~~~~~~ 420 (427)
+++++||+.||++|||++|+++. ++.+++.
T Consensus 286 ~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~~ 317 (328)
T cd08226 286 NLVELCLQQDPEKRPSASSLLSHAFFKQVKEQ 317 (328)
T ss_pred HHHHHHccCCcccCCCHHHHhhCHHHHHHHHh
Confidence 99999999999999999999753 4444443
No 272
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.97 E-value=2.2e-31 Score=244.48 Aligned_cols=192 Identities=22% Similarity=0.326 Sum_probs=151.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||+++.++.+. .....++||||+++++|.+++..... ..+++..+..++.|++.|++||| ++|++||
T Consensus 56 ~~~~~i~~~~~~~~-----~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh---~~~i~h~ 125 (256)
T cd08220 56 LSHPNIIEYYENFL-----EDKALMIVMEYAPGGTLAEYIQKRCN--SLLDEDTILHFFVQILLALHHVH---TKLILHR 125 (256)
T ss_pred CCCCchhheeeeEe-----cCCEEEEEEecCCCCCHHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH---hCCeecC
Confidence 46999999988743 35678999999999999999865432 45889999999999999999999 8999999
Q ss_pred cccCCceeeCCC-CceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGE-LTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~-~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.+ ..+||+|||.++..... ..++..|+|||.+.+..++.++||||||+++|+|++|+.||....
T Consensus 126 dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~ 205 (256)
T cd08220 126 DLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAAN 205 (256)
T ss_pred CCCHHHEEEcCCCCEEEEccCCCceecCCCccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCc
Confidence 999999999754 56899999999876543 256778999999998889999999999999999999999986531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
. .............. .+..++.++.+++.+||+.+|++|||++|+++
T Consensus 206 ~-----~~~~~~~~~~~~~~----------------------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 206 L-----PALVLKIMSGTFAP----------------------------ISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred h-----HHHHHHHHhcCCCC----------------------------CCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 1 11111110000000 11124556889999999999999999999986
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
+
T Consensus 253 ~ 253 (256)
T cd08220 253 Q 253 (256)
T ss_pred C
Confidence 3
No 273
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.97 E-value=3.3e-31 Score=246.67 Aligned_cols=192 Identities=19% Similarity=0.220 Sum_probs=150.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
..||+++++.+.+.. ....++||||+++|+|.+++... ..+++..++.++.|++.|++||| +.+|+||
T Consensus 54 ~~~~~i~~~~~~~~~-----~~~~~~v~e~~~g~~L~~~l~~~----~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~ 121 (278)
T cd05606 54 GDCPFIVCMSYAFHT-----PDKLSFILDLMNGGDLHYHLSQH----GVFSEAEMRFYAAEIILGLEHMH---NRFVVYR 121 (278)
T ss_pred CCCCcEeeeeeeeec-----CCEEEEEEecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCEEcC
Confidence 468999998877443 56789999999999999888643 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc----CCCccccccccccCCC-CcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA----TNNFFNFQIAEYGMGS-EVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~y~aPE~~~~~-~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
||||+||+++.++.+||+|||.++..... ..|+..|+|||++.+. .++.++||||+||++|||++|+.||.....
T Consensus 122 di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~ 201 (278)
T cd05606 122 DLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 201 (278)
T ss_pred CCCHHHEEECCCCCEEEccCcCccccCccCCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCc
Confidence 99999999999999999999998755332 2678899999998754 689999999999999999999999975321
Q ss_pred CCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC-----CHH
Q 042634 334 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM-----NME 408 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp-----t~~ 408 (427)
... ......... ... ..+...+.++.+++.+|+..+|.+|| |+.
T Consensus 202 ~~~--~~~~~~~~~------~~~-----------------------~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~ 250 (278)
T cd05606 202 KDK--HEIDRMTLT------MAV-----------------------ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQ 250 (278)
T ss_pred cch--HHHHHHhhc------cCC-----------------------CCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHH
Confidence 111 000000000 000 01122356789999999999999999 999
Q ss_pred HHHHH
Q 042634 409 EVAAQ 413 (427)
Q Consensus 409 ev~~~ 413 (427)
|+++.
T Consensus 251 ~ll~~ 255 (278)
T cd05606 251 EVKEH 255 (278)
T ss_pred HHHhC
Confidence 99863
No 274
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.97 E-value=1.6e-31 Score=252.23 Aligned_cols=194 Identities=20% Similarity=0.207 Sum_probs=150.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. +...++||||+++++|.+++... ..+++..+..++.|++.|++||| +.|++||
T Consensus 58 ~~~~~i~~~~~~~~~-----~~~~~lv~e~~~g~~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~ 125 (305)
T cd05609 58 AENPFVVSMFCSFET-----KRHLCMVMEYVEGGDCATLLKNI----GALPVDMARMYFAETVLALEYLH---NYGIVHR 125 (305)
T ss_pred CCCCCeeeeEEEEec-----CCEEEEEEecCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccc
Confidence 679999999987533 56789999999999999998654 34889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC---------------------cCCCccccccccccCCCCcCccccchhHHHH
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE---------------------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGIL 317 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~---------------------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~v 317 (427)
||||+||+++.++.+||+|||.++.... ...++..|+|||.+....++.++|||||||+
T Consensus 126 dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~v 205 (305)
T cd05609 126 DLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGII 205 (305)
T ss_pred CCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHH
Confidence 9999999999999999999999874210 1145678999999988889999999999999
Q ss_pred HHHHHhCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcC
Q 042634 318 LLETFTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCS 397 (427)
Q Consensus 318 l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl 397 (427)
+||+++|..||.+.. ..+.......... ..+ .....++.++.+++.+||
T Consensus 206 l~el~~g~~pf~~~~-----~~~~~~~~~~~~~---~~~-----------------------~~~~~~~~~~~~li~~~l 254 (305)
T cd05609 206 LYEFLVGCVPFFGDT-----PEELFGQVISDDI---EWP-----------------------EGDEALPADAQDLISRLL 254 (305)
T ss_pred HHHHHhCCCCCCCCC-----HHHHHHHHHhccc---CCC-----------------------CccccCCHHHHHHHHHHh
Confidence 999999999996431 1111111100000 000 001124566899999999
Q ss_pred CCCCCCCCCHHHHHHHHH
Q 042634 398 SELPRERMNMEEVAAQLL 415 (427)
Q Consensus 398 ~~dP~~Rpt~~ev~~~L~ 415 (427)
+.||++|||+.++.+.|+
T Consensus 255 ~~~P~~R~~~~~~~~ll~ 272 (305)
T cd05609 255 RQNPLERLGTGGAFEVKQ 272 (305)
T ss_pred ccChhhccCccCHHHHHh
Confidence 999999999765555544
No 275
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.97 E-value=2.3e-31 Score=247.88 Aligned_cols=193 Identities=21% Similarity=0.267 Sum_probs=150.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. +...++||||+++++|.+++.... ..+++..++.++.|++.||.||| +.||+||
T Consensus 59 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~ 127 (280)
T cd06611 59 CKHPNIVGLYEAYFY-----ENKLWILIEFCDGGALDSIMLELE---RGLTEPQIRYVCRQMLEALNFLH---SHKVIHR 127 (280)
T ss_pred CCCCceeEEEEEEec-----CCeEEEEeeccCCCcHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccC
Confidence 569999999998543 567899999999999999886543 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccC-----CCCcCccccchhHHHHHHHHHhCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGM-----GSEVSTSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~-----~~~~~~~~DiwS~G~vl~ell~g~~p 327 (427)
||||+||+++.++.+||+|||.+...... ..++..|+|||.+. ...++.++|||||||++|||++|+.|
T Consensus 128 dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p 207 (280)
T cd06611 128 DLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPP 207 (280)
T ss_pred CCChhhEEECCCCCEEEccCccchhhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999998755332 25778899999875 34568899999999999999999999
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
|...... +........ ..+.. ..+..++.++.+++.+||+.+|.+|||+
T Consensus 208 ~~~~~~~-----~~~~~~~~~-----~~~~~---------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~ 256 (280)
T cd06611 208 HHELNPM-----RVLLKILKS-----EPPTL---------------------DQPSKWSSSFNDFLKSCLVKDPDDRPTA 256 (280)
T ss_pred cccCCHH-----HHHHHHhcC-----CCCCc---------------------CCcccCCHHHHHHHHHHhccChhhCcCH
Confidence 9753111 111000000 00000 0112245568899999999999999999
Q ss_pred HHHHHH
Q 042634 408 EEVAAQ 413 (427)
Q Consensus 408 ~ev~~~ 413 (427)
+++++.
T Consensus 257 ~~il~~ 262 (280)
T cd06611 257 AELLKH 262 (280)
T ss_pred HHHhcC
Confidence 999876
No 276
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=8.9e-31 Score=244.75 Aligned_cols=197 Identities=18% Similarity=0.251 Sum_probs=151.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. +...++||||+++++|.+++..... ...+++..+..++.|++.||.|||+ ..||+||
T Consensus 56 ~~~~~i~~~~~~~~~-----~~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~ 127 (286)
T cd06622 56 AVSPYIVDFYGAFFI-----EGAVYMCMEYMDAGSLDKLYAGGVA-TEGIPEDVLRRITYAVVKGLKFLKE--EHNIIHR 127 (286)
T ss_pred cCCCcHHhhhhheec-----CCeEEEEEeecCCCCHHHHHHhccc-cCCCCHHHHHHHHHHHHHHHHHHHh--cCCEeeC
Confidence 579999999997543 5678999999999999888865311 1358999999999999999999993 3599999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc----CCCccccccccccCCC------CcCccccchhHHHHHHHHHhCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA----TNNFFNFQIAEYGMGS------EVSTSGDVYSFGILLLETFTGKRPT 328 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~y~aPE~~~~~------~~~~~~DiwS~G~vl~ell~g~~pf 328 (427)
||||+||+++.++.+||+|||.+...... ..++..|+|||.+.+. .++.++|||||||++||+++|+.||
T Consensus 128 dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf 207 (286)
T cd06622 128 DVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPY 207 (286)
T ss_pred CCCHHHEEECCCCCEEEeecCCcccccCCccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCC
Confidence 99999999999999999999999765332 2567789999998554 3588999999999999999999999
Q ss_pred CcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 329 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
..... .............. ....+..++.++.+++.+||+.+|++|||++
T Consensus 208 ~~~~~--~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ 257 (286)
T cd06622 208 PPETY--ANIFAQLSAIVDGD----------------------------PPTLPSGYSDDAQDFVAKCLNKIPNRRPTYA 257 (286)
T ss_pred CCcch--hhHHHHHHHHhhcC----------------------------CCCCCcccCHHHHHHHHHHcccCcccCCCHH
Confidence 65311 11111111100000 0002233567789999999999999999999
Q ss_pred HHHHH
Q 042634 409 EVAAQ 413 (427)
Q Consensus 409 ev~~~ 413 (427)
|++..
T Consensus 258 ~l~~~ 262 (286)
T cd06622 258 QLLEH 262 (286)
T ss_pred HHhcC
Confidence 99874
No 277
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.97 E-value=4e-31 Score=245.53 Aligned_cols=190 Identities=22% Similarity=0.304 Sum_probs=152.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++.+.+.. +...++|+||+++++|.+++... .+++..+..++.|++.|+.||| ..+++||
T Consensus 56 l~h~~i~~~~~~~~~-----~~~~~~v~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~ql~~~l~~lh---~~~i~h~ 122 (274)
T cd06609 56 CRSPYITKYYGSFLK-----GSKLWIIMEYCGGGSCLDLLKPG-----KLDETYIAFILREVLLGLEYLH---EEGKIHR 122 (274)
T ss_pred cCCCCeeeeeEEEEE-----CCeEEEEEEeeCCCcHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHH---hCCcccC
Confidence 469999999887543 46789999999999999998653 4889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||+|+||++++++.++|+|||.++..... ..++..|+|||++.+..++.++|||||||++||+++|+.||....
T Consensus 123 dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~ 202 (274)
T cd06609 123 DIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLH 202 (274)
T ss_pred CCCHHHEEECCCCCEEEcccccceeecccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCc
Confidence 99999999999999999999999876543 256778999999999889999999999999999999999996532
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
. ......+....+.. .....++.++.+++.+||..+|++|||++++++
T Consensus 203 ~--~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 203 P--MRVLFLIPKNNPPS------------------------------LEGNKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred h--HHHHHHhhhcCCCC------------------------------CcccccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 1 11100001000000 000114556889999999999999999999976
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
.
T Consensus 251 ~ 251 (274)
T cd06609 251 H 251 (274)
T ss_pred C
Confidence 3
No 278
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=9.9e-32 Score=242.87 Aligned_cols=209 Identities=19% Similarity=0.255 Sum_probs=151.2
Q ss_pred CCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccccCCceeeCC---------
Q 042634 199 NDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDG--------- 269 (427)
Q Consensus 199 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~--------- 269 (427)
.++.|+|+|.+ |-|+++++..+.. .+++..+++.|+.|++++++||| +.+++|-||||+|||+.+
T Consensus 163 rghiCivfell-G~S~~dFlk~N~y--~~fpi~~ir~m~~QL~~sv~fLh---~~kl~HTDLKPENILfvss~~~~~~~~ 236 (415)
T KOG0671|consen 163 RGHICIVFELL-GLSTFDFLKENNY--IPFPIDHIRHMGYQLLESVAFLH---DLKLTHTDLKPENILFVSSEYFKTYNP 236 (415)
T ss_pred cCceEEEEecc-ChhHHHHhccCCc--cccchHHHHHHHHHHHHHHHHHH---hcceeecCCChheEEEeccceEEEecc
Confidence 67899999988 7799999987654 67999999999999999999999 899999999999999821
Q ss_pred -----------CCceEecccccccccCCcC---CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccC-C
Q 042634 270 -----------ELTAHVGDFGLAKFLPEAT---NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFT-G 334 (427)
Q Consensus 270 -----------~~~~kL~DFG~a~~~~~~~---~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~-~ 334 (427)
+..+|++|||.|+...+.. +.|..|+|||++.+-.|+.++||||+|||++|+++|...|+.-.+ +
T Consensus 237 k~~~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~E 316 (415)
T KOG0671|consen 237 KKKVCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLE 316 (415)
T ss_pred CCccceeccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHH
Confidence 2358999999999877665 889999999999999999999999999999999999999986431 1
Q ss_pred CccHHHHHHHhcccchhcccCccccccccccchhhhccc-----------cccccccchHHHHHHHHHHHhhcCCCCCCC
Q 042634 335 NLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAH-----------KQFTRSFSVKECLVSVLGIGVTCSSELPRE 403 (427)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~ 403 (427)
...+.+.+-..+|..+....++.--...+.-.+...... +.............++.+|+++|+..||.+
T Consensus 317 HLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~ 396 (415)
T KOG0671|consen 317 HLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPAR 396 (415)
T ss_pred HHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccc
Confidence 112222222233322111110000000000000000000 011112234556778999999999999999
Q ss_pred CCCHHHHHHH
Q 042634 404 RMNMEEVAAQ 413 (427)
Q Consensus 404 Rpt~~ev~~~ 413 (427)
|+|+.|++.+
T Consensus 397 RiTl~EAL~H 406 (415)
T KOG0671|consen 397 RITLREALSH 406 (415)
T ss_pred cccHHHHhcC
Confidence 9999999864
No 279
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.97 E-value=2.1e-31 Score=246.08 Aligned_cols=191 Identities=21% Similarity=0.284 Sum_probs=151.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|+|++++.+.+.. ....++++||+++++|.+++... ..+++..+..++.|++.||+||| +.+|+|+
T Consensus 59 l~~~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~ 126 (265)
T cd06631 59 LKHVNIVQYLGTCLD-----DNTISIFMEFVPGGSISSILNRF----GPLPEPVFCKYTKQILDGVAYLH---NNCVVHR 126 (265)
T ss_pred cCCCCEeeEeeEeec-----CCeEEEEEecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCcccC
Confidence 569999999998644 46789999999999999998654 34789999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC------------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE------------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKR 326 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~------------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~ 326 (427)
||||+||+++.++.+||+|||.+..... ...++..|+|||++.+..++.++|||||||++||+++|..
T Consensus 127 dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~ 206 (265)
T cd06631 127 DIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKP 206 (265)
T ss_pred CcCHHhEEECCCCeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999875421 1256778999999998889999999999999999999999
Q ss_pred CCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC
Q 042634 327 PTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN 406 (427)
Q Consensus 327 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt 406 (427)
||....... ..... ... .. .. + ..+...+.++.+++++||+.+|++|||
T Consensus 207 p~~~~~~~~-~~~~~-~~~-~~----~~-~-----------------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~ 255 (265)
T cd06631 207 PLASMDRLA-AMFYI-GAH-RG----LM-P-----------------------RLPDSFSAAAIDFVTSCLTRDQHERPS 255 (265)
T ss_pred ccccCChHH-HHHHh-hhc-cC----CC-C-----------------------CCCCCCCHHHHHHHHHHhcCCcccCCC
Confidence 996531110 00000 000 00 00 0 011224566899999999999999999
Q ss_pred HHHHHH
Q 042634 407 MEEVAA 412 (427)
Q Consensus 407 ~~ev~~ 412 (427)
++|+++
T Consensus 256 ~~~~l~ 261 (265)
T cd06631 256 ALQLLR 261 (265)
T ss_pred HHHHhc
Confidence 999975
No 280
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.97 E-value=5.4e-31 Score=242.00 Aligned_cols=193 Identities=28% Similarity=0.480 Sum_probs=153.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. ....+++|||+++++|.+++..... ..+++..+..++.|++.|++||| +.|++||
T Consensus 58 l~~~~i~~~~~~~~~-----~~~~~~i~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lh---~~~~~h~ 127 (258)
T smart00219 58 LDHPNIVKLLGVCTE-----EEPLMIVMEYMEGGDLLDYLRKNRP--KELSLSDLLSFALQIARGMEYLE---SKNFIHR 127 (258)
T ss_pred cCCCchheEEEEEcC-----CCeeEEEEeccCCCCHHHHHHhhhh--ccCCHHHHHHHHHHHHHHHHHHh---cCCeeec
Confidence 479999999988544 4578999999999999999875432 22899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-------CCCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~ 330 (427)
||||+||+++.++.+||+|||.++..... ..++..|+|||...+..++.++||||+||++|||++ |..||..
T Consensus 128 dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~ 207 (258)
T smart00219 128 DLAARNCLVGENLVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPG 207 (258)
T ss_pred ccccceEEEccCCeEEEcccCCceecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999999866543 235678999999988889999999999999999998 7888864
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
. . ............. ...+..++.++.+++.+||..||++|||+.|+
T Consensus 208 ~--~---~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l 254 (258)
T smart00219 208 M--S---NEEVLEYLKKGYR----------------------------LPKPENCPPEIYKLMLQCWAEDPEDRPTFSEL 254 (258)
T ss_pred C--C---HHHHHHHHhcCCC----------------------------CCCCCcCCHHHHHHHHHHCcCChhhCcCHHHH
Confidence 2 1 1111111100000 00112246678999999999999999999999
Q ss_pred HHHH
Q 042634 411 AAQL 414 (427)
Q Consensus 411 ~~~L 414 (427)
++.|
T Consensus 255 l~~l 258 (258)
T smart00219 255 VEIL 258 (258)
T ss_pred HhhC
Confidence 8764
No 281
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.97 E-value=3.4e-31 Score=243.99 Aligned_cols=192 Identities=20% Similarity=0.224 Sum_probs=151.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+|||++++++.+.. +...++|+||+++++|.+++... ..+++..+..++.|++.||.||| +.+++||
T Consensus 54 ~~~~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~lH---~~~i~H~ 121 (260)
T cd05611 54 GESPYVAKLYYSFQS-----KDYLYLVMEYLNGGDCASLIKTL----GGLPEDWAKQYIAEVVLGVEDLH---QRGIIHR 121 (260)
T ss_pred CCCCCeeeeeeeEEc-----CCeEEEEEeccCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecC
Confidence 479999999988543 56789999999999999998654 34889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC--cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE--ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNL 336 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~--~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~~~ 336 (427)
||+|+||+++.++.+||+|||+++.... ...++..|+|||.+.+..++.++||||||+++||+++|..||.....
T Consensus 122 dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--- 198 (260)
T cd05611 122 DIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP--- 198 (260)
T ss_pred CCCHHHeEECCCCcEEEeecccceeccccccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH---
Confidence 9999999999999999999999986543 23678889999999888889999999999999999999999965311
Q ss_pred cHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 337 TLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
........... .+ .+......++.++.+++.+||+.+|++|||+.++.+
T Consensus 199 --~~~~~~~~~~~----~~---------------------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~ 247 (260)
T cd05611 199 --DAVFDNILSRR----IN---------------------WPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQE 247 (260)
T ss_pred --HHHHHHHHhcc----cC---------------------CCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHH
Confidence 11111100000 00 000011235667899999999999999997765544
No 282
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=2.4e-31 Score=266.57 Aligned_cols=224 Identities=17% Similarity=0.145 Sum_probs=147.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhh-hhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREA-LKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
++|||||++++++.. ....++|+|++ .+++.+++...... ........++.++.|++.||+||| ++||+|
T Consensus 220 l~HpnIv~l~~~~~~-----~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH---~~gIiH 290 (501)
T PHA03210 220 LNHENILKIEEILRS-----EANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH---DKKLIH 290 (501)
T ss_pred CCCCCcCcEeEEEEE-----CCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHH---hCCeec
Confidence 579999999998544 55679999998 56777766432210 122345678889999999999999 899999
Q ss_pred ccccCCceeeCCCCceEecccccccccCCc-------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCC-CC
Q 042634 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEA-------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP-TN 329 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~DFG~a~~~~~~-------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~p-f~ 329 (427)
|||||+|||++.++.+||+|||+++..... ..|+..|+|||++.+..++.++|||||||++|||++|..+ |.
T Consensus 291 rDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~ 370 (501)
T PHA03210 291 RDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIG 370 (501)
T ss_pred CCCCHHHEEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCcc
Confidence 999999999999999999999999865432 2688999999999999999999999999999999998754 43
Q ss_pred cccCCC-ccHHHHHHHhcccchhcccCccccc-cccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 330 EMFTGN-LTLHNFVKEALPERLAEIVDPVLLV-EREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 330 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
...... ..+.+.+.. +.....+..+..... +.-..... ................+..+.+++.+|+++||++|||+
T Consensus 371 ~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa 448 (501)
T PHA03210 371 DGGGKPGKQLLKIIDS-LSVCDEEFPDPPCKLFDYIDSAEI-DHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGA 448 (501)
T ss_pred CCCCCHHHHHHHHHHh-cccChhhcCCcHHHHHHHhhhhhc-ccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCH
Confidence 221111 111111111 000000000000000 00000000 00000000000111134567888999999999999999
Q ss_pred HHHHHH
Q 042634 408 EEVAAQ 413 (427)
Q Consensus 408 ~ev~~~ 413 (427)
.|++++
T Consensus 449 ~elL~h 454 (501)
T PHA03210 449 AELLAL 454 (501)
T ss_pred HHHhhC
Confidence 999864
No 283
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.97 E-value=2.3e-31 Score=244.47 Aligned_cols=192 Identities=21% Similarity=0.283 Sum_probs=153.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++.+.+. .....++||||+++++|.+++..... ..+++.++..++.|++.|+.||| +.|++|+
T Consensus 56 l~~~~i~~~~~~~~-----~~~~~~lv~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~ 125 (256)
T cd08218 56 MKHPNIVQYQESFE-----ENGNLYIVMDYCEGGDLYKKINAQRG--VLFPEDQILDWFVQICLALKHVH---DRKILHR 125 (256)
T ss_pred CCCCCeeeeEeeec-----CCCeEEEEEecCCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHH---hCCEecC
Confidence 46999999988743 35678999999999999998865322 34788999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC------CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||+|+||+++.++.+||+|||.+....... .++..|+|||+..+..++.++|+|||||++|++++|+.||....
T Consensus 126 ~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~ 205 (256)
T cd08218 126 DIKSQNIFLTKDGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGN 205 (256)
T ss_pred CCCHHHEEEcCCCCEEEeeccceeecCcchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCC
Confidence 999999999999999999999998664432 56778999999988889999999999999999999999986421
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
....+......... ..+...+.++.+++.+||+.+|++||++.||++
T Consensus 206 -----~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 206 -----MKNLVLKIIRGSYP----------------------------PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred -----HHHHHHHHhcCCCC----------------------------CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 11111111110000 012234567899999999999999999999987
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
+
T Consensus 253 ~ 253 (256)
T cd08218 253 K 253 (256)
T ss_pred C
Confidence 4
No 284
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.97 E-value=3.1e-31 Score=253.21 Aligned_cols=195 Identities=17% Similarity=0.192 Sum_probs=147.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+|++|+++++.+. .....++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.||+||
T Consensus 58 ~~~~~i~~~~~~~~-----~~~~~~lv~ey~~~g~L~~~l~~~~---~~l~~~~~~~~~~qi~~al~~lH---~~~iiHr 126 (332)
T cd05623 58 GDNQWITTLHYAFQ-----DENNLYLVMDYYVGGDLLTLLSKFE---DRLPEDMARFYLAEMVIAIDSVH---QLHYVHR 126 (332)
T ss_pred CCCCCEeeEEEEEe-----cCCEEEEEEeccCCCcHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeEec
Confidence 57999999988743 3567899999999999999996532 35889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-------CCCccccccccccC-----CCCcCccccchhHHHHHHHHHhCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-------TNNFFNFQIAEYGM-----GSEVSTSGDVYSFGILLLETFTGKR 326 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-------~~~~~~y~aPE~~~-----~~~~~~~~DiwS~G~vl~ell~g~~ 326 (427)
||||+||+++.++.+||+|||+++..... ..||..|+|||++. ...++.++|||||||++|||++|+.
T Consensus 127 Dlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~ 206 (332)
T cd05623 127 DIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGET 206 (332)
T ss_pred CCCHHHEEECCCCCEEEeecchheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCC
Confidence 99999999999999999999998754321 26889999999986 3457899999999999999999999
Q ss_pred CCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCC--C
Q 042634 327 PTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRE--R 404 (427)
Q Consensus 327 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~--R 404 (427)
||.... ..+.......... . .........++.++.+++++|+..++.+ |
T Consensus 207 Pf~~~~-----~~~~~~~i~~~~~-~-----------------------~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r 257 (332)
T cd05623 207 PFYAES-----LVETYGKIMNHKE-R-----------------------FQFPAQVTDVSEDAKDLIRRLICSREHRLGQ 257 (332)
T ss_pred CCCCCC-----HHHHHHHHhCCCc-c-----------------------ccCCCccccCCHHHHHHHHHHccChhhhcCC
Confidence 997531 1111111110000 0 0000011224566888999988655444 6
Q ss_pred CCHHHHHHH
Q 042634 405 MNMEEVAAQ 413 (427)
Q Consensus 405 pt~~ev~~~ 413 (427)
+|++|++++
T Consensus 258 ~~~~~~~~h 266 (332)
T cd05623 258 NGIEDFKQH 266 (332)
T ss_pred CCHHHHhCC
Confidence 899999876
No 285
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.97 E-value=5.2e-31 Score=246.13 Aligned_cols=217 Identities=21% Similarity=0.268 Sum_probs=151.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. ....++||||++++.|..+.... ..+++..++.++.|++.||+||| +.|++||
T Consensus 57 ~~h~~i~~~~~~~~~-----~~~~~~v~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~ql~~~l~~LH---~~~i~H~ 124 (286)
T cd07847 57 LKHPNLVNLIEVFRR-----KRKLHLVFEYCDHTVLNELEKNP----RGVPEHLIKKIIWQTLQAVNFCH---KHNCIHR 124 (286)
T ss_pred CCCCCEeeeeeEEee-----CCEEEEEEeccCccHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHH---HCCceec
Confidence 569999999988543 56789999999998888776543 34899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC------CCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT------NNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~------~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||+||+++.++.+||+|||.+....... .++..|+|||++.+ ..++.++|||||||++|||++|+.||.+.
T Consensus 125 dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~ 204 (286)
T cd07847 125 DVKPENILITKQGQIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGK 204 (286)
T ss_pred CCChhhEEEcCCCcEEECccccceecCCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 999999999999999999999998764432 46678999999876 55789999999999999999999999754
Q ss_pred cCCCccHHHHHHHh--cccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 332 FTGNLTLHNFVKEA--LPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 332 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
...+ ......... ......+..+..... .............. .......+..+.+++.+||+.+|++|||+.|
T Consensus 205 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e 279 (286)
T cd07847 205 SDVD-QLYLIRKTLGDLIPRHQQIFSTNQFF---KGLSIPEPETREPL-ESKFPNISSPALSFLKGCLQMDPTERLSCEE 279 (286)
T ss_pred ChHH-HHHHHHHHhCCCChHHhhhccccccc---ccccCCCcccccCH-HHHhccCCHHHHHHHHHHhcCCccccCCHHH
Confidence 3211 111111100 000001111000000 00000000000000 0001123567899999999999999999999
Q ss_pred HHH
Q 042634 410 VAA 412 (427)
Q Consensus 410 v~~ 412 (427)
++.
T Consensus 280 il~ 282 (286)
T cd07847 280 LLE 282 (286)
T ss_pred Hhc
Confidence 975
No 286
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-31 Score=253.72 Aligned_cols=192 Identities=23% Similarity=0.321 Sum_probs=153.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
+.|||+|.+-+++.. ....|+||||| -|+-.+++.-.. +++.+.++..|..+.+.||.||| +.+.|||
T Consensus 83 l~HPntieYkgCyLr-----e~TaWLVMEYC-lGSAsDlleVhk---KplqEvEIAAi~~gaL~gLaYLH---S~~~IHR 150 (948)
T KOG0577|consen 83 LRHPNTIEYKGCYLR-----EHTAWLVMEYC-LGSASDLLEVHK---KPLQEVEIAAITHGALQGLAYLH---SHNRIHR 150 (948)
T ss_pred ccCCCcccccceeec-----cchHHHHHHHH-hccHHHHHHHHh---ccchHHHHHHHHHHHHHHHHHHH---HhhHHhh
Confidence 679999999887433 55689999999 677777775543 66889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC--CCccccccccccCC---CCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT--NNFFNFQIAEYGMG---SEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~--~~~~~y~aPE~~~~---~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
|||..|||+++.|.|||+|||.|....... +||+.|||||++.. +.|+.|+||||+|+++.|+..+++|+..+..
T Consensus 151 DiKAGNILLse~g~VKLaDFGSAsi~~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNA 230 (948)
T KOG0577|consen 151 DIKAGNILLSEPGLVKLADFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA 230 (948)
T ss_pred hccccceEecCCCeeeeccccchhhcCchhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchH
Confidence 999999999999999999999998876543 99999999999853 6799999999999999999999999765411
Q ss_pred CCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 042634 334 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQ 413 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~ 413 (427)
+..--.+...-+ + .....+-...|..++..|++.-|.+|||.++++++
T Consensus 231 --MSALYHIAQNes--------P----------------------tLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 231 --MSALYHIAQNES--------P----------------------TLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred --HHHHHHHHhcCC--------C----------------------CCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 100001111111 1 11223346678999999999999999999998875
Q ss_pred H
Q 042634 414 L 414 (427)
Q Consensus 414 L 414 (427)
-
T Consensus 279 ~ 279 (948)
T KOG0577|consen 279 R 279 (948)
T ss_pred c
Confidence 3
No 287
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.97 E-value=4.4e-31 Score=245.00 Aligned_cols=203 Identities=26% Similarity=0.412 Sum_probs=153.1
Q ss_pred cccccchhhhccccccCCCC-CCccceeeeeecCCCcccccccch--hhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 042634 179 IRHRNLVKIITSCASVDFQG-NDSEALVYEFMVNGSLEEWLHPNR--EALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~i 255 (427)
++|||++++++.+......+ ....++++||+.+|+|.+++.... .....+++..++.++.|++.|++||| +.||
T Consensus 58 l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i 134 (273)
T cd05074 58 FDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLS---SKNF 134 (273)
T ss_pred CCCCCcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCE
Confidence 57999999998764422111 123468899999999988764321 11134788999999999999999999 8999
Q ss_pred eeccccCCceeeCCCCceEecccccccccCCcC--------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCC
Q 042634 256 VHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT--------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKR 326 (427)
Q Consensus 256 vHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~--------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~ 326 (427)
+||||||+||+++.++.+||+|||.++...... .++..|++||.+....++.++|||||||++||+++ |+.
T Consensus 135 ~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~ 214 (273)
T cd05074 135 IHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQT 214 (273)
T ss_pred eecccchhhEEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCC
Confidence 999999999999999999999999998653221 34467999999988889999999999999999999 888
Q ss_pred CCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC
Q 042634 327 PTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN 406 (427)
Q Consensus 327 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt 406 (427)
||..... .......... ... ..+..++..+.+++.+||+.+|++|||
T Consensus 215 p~~~~~~--~~~~~~~~~~--~~~-----------------------------~~~~~~~~~~~~l~~~~l~~~p~~Rps 261 (273)
T cd05074 215 PYAGVEN--SEIYNYLIKG--NRL-----------------------------KQPPDCLEDVYELMCQCWSPEPKCRPS 261 (273)
T ss_pred CCCCCCH--HHHHHHHHcC--CcC-----------------------------CCCCCCCHHHHHHHHHHcCCChhhCcC
Confidence 8864311 1111111100 000 011123567899999999999999999
Q ss_pred HHHHHHHHHHH
Q 042634 407 MEEVAAQLLSF 417 (427)
Q Consensus 407 ~~ev~~~L~~~ 417 (427)
+.|+++.|+++
T Consensus 262 ~~~~~~~l~~~ 272 (273)
T cd05074 262 FQHLRDQLELI 272 (273)
T ss_pred HHHHHHHHHhh
Confidence 99999999875
No 288
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.97 E-value=5.2e-31 Score=251.46 Aligned_cols=141 Identities=23% Similarity=0.274 Sum_probs=122.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+||||+++++.+.. +...++||||+++|+|.+++.... ..+++..+..++.||+.||+||| ++||+||
T Consensus 58 ~~~~~i~~~~~~~~~-----~~~~~lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~ 126 (331)
T cd05597 58 GDRRWITNLHYAFQD-----ENNLYLVMDYYVGGDLLTLLSKFE---DRLPEDMARFYLAEMVLAIDSVH---QLGYVHR 126 (331)
T ss_pred CCCCCCCceEEEEec-----CCeEEEEEecCCCCcHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCeEEC
Confidence 579999999887543 567899999999999999986432 35889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-------CCCccccccccccCC-----CCcCccccchhHHHHHHHHHhCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-------TNNFFNFQIAEYGMG-----SEVSTSGDVYSFGILLLETFTGKR 326 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-------~~~~~~y~aPE~~~~-----~~~~~~~DiwS~G~vl~ell~g~~ 326 (427)
||||+|||++.++.+||+|||++...... ..|+..|+|||++.. ..++.++||||+||++|||++|+.
T Consensus 127 dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~ 206 (331)
T cd05597 127 DIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGET 206 (331)
T ss_pred CCCHHHEEECCCCCEEEEECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCC
Confidence 99999999999999999999998765332 258899999999863 457889999999999999999999
Q ss_pred CCCc
Q 042634 327 PTNE 330 (427)
Q Consensus 327 pf~~ 330 (427)
||..
T Consensus 207 Pf~~ 210 (331)
T cd05597 207 PFYA 210 (331)
T ss_pred CCCC
Confidence 9965
No 289
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.97 E-value=5.6e-31 Score=243.28 Aligned_cols=192 Identities=20% Similarity=0.225 Sum_probs=148.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||++.++.+... .....+++|||+++++|.+++... ..+++..++.++.|++.||+||| +.+|+|+
T Consensus 61 l~h~~i~~~~~~~~~~---~~~~~~~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~ 130 (265)
T cd06652 61 LLHERIVQYYGCLRDP---MERTLSIFMEHMPGGSIKDQLKSY----GALTENVTRKYTRQILEGVSYLH---SNMIVHR 130 (265)
T ss_pred cCCCCeeeEEeEeccC---CCceEEEEEEecCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---hCCEecC
Confidence 4799999998864331 124578999999999999988644 34788899999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC---------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE---------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~---------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~ 329 (427)
||||+||+++.++.+||+|||.++.... ...++..|+|||.+.+..++.++|||||||++||+++|+.||.
T Consensus 131 dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~ 210 (265)
T cd06652 131 DIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWA 210 (265)
T ss_pred CCCHHHEEecCCCCEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCC
Confidence 9999999999999999999999975432 1257778999999988889999999999999999999999986
Q ss_pred cccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 330 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
... ..... ....... .....+......+.+++.+||. +|++|||++|
T Consensus 211 ~~~----~~~~~-~~~~~~~---------------------------~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~ 257 (265)
T cd06652 211 EFE----AMAAI-FKIATQP---------------------------TNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADE 257 (265)
T ss_pred ccc----hHHHH-HHHhcCC---------------------------CCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHH
Confidence 421 01111 0000000 0001223345678889999994 9999999999
Q ss_pred HHHH
Q 042634 410 VAAQ 413 (427)
Q Consensus 410 v~~~ 413 (427)
|++.
T Consensus 258 il~~ 261 (265)
T cd06652 258 LLRH 261 (265)
T ss_pred HhcC
Confidence 9863
No 290
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.97 E-value=7.1e-31 Score=242.14 Aligned_cols=192 Identities=23% Similarity=0.249 Sum_probs=152.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. +...++++||+++++|.+++.+. ..+++..+..++.|++.||+|+| +.|++|+
T Consensus 50 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~~i~~~l~~lH---~~~~~h~ 117 (262)
T cd05572 50 CNHPFIVKLYRTFKD-----KKYIYMLMEYCLGGELWTILRDR----GLFDEYTARFYIACVVLAFEYLH---NRGIIYR 117 (262)
T ss_pred CCCCCEeeeeeeEEc-----CCccEEEEecCCCCcHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHh---hCCcccC
Confidence 579999999987533 56789999999999999999764 34889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
||||+||+++.++.+||+|||.++..... ..++..|+|||.+.+..++.++|+||+|+++||+++|..||.....
T Consensus 118 dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~ 197 (262)
T cd05572 118 DLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE 197 (262)
T ss_pred CCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC
Confidence 99999999999999999999999876543 2567889999999888899999999999999999999999976432
Q ss_pred CCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC-----HH
Q 042634 334 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN-----ME 408 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt-----~~ 408 (427)
+. .+...... +... ....+...+.++.+++.+||+.+|++||| ++
T Consensus 198 ~~---~~~~~~~~--------~~~~-------------------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~ 247 (262)
T cd05572 198 DP---MEIYNDIL--------KGNG-------------------KLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIK 247 (262)
T ss_pred CH---HHHHHHHh--------ccCC-------------------CCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHH
Confidence 11 11111110 0000 00012223567899999999999999999 66
Q ss_pred HHHH
Q 042634 409 EVAA 412 (427)
Q Consensus 409 ev~~ 412 (427)
|+++
T Consensus 248 ~l~~ 251 (262)
T cd05572 248 DIKK 251 (262)
T ss_pred HHhc
Confidence 6655
No 291
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.97 E-value=1e-30 Score=244.27 Aligned_cols=190 Identities=22% Similarity=0.325 Sum_probs=150.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. ....++++||+++++|.+++.. ..+++..+..++.|++.|++||| +.|++||
T Consensus 73 ~~h~~vv~~~~~~~~-----~~~~~~v~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~ 139 (285)
T cd06648 73 YQHPNIVEMYSSYLV-----GDELWVVMEFLEGGALTDIVTH-----TRMNEEQIATVCLAVLKALSFLH---AQGVIHR 139 (285)
T ss_pred cCCCChheEEEEEEc-----CCeEEEEEeccCCCCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecC
Confidence 469999999987543 5678999999999999998865 23888999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||.+...... ..++..|+|||...+..++.++|||||||++|||++|+.||....
T Consensus 140 dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~ 219 (285)
T cd06648 140 DIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEP 219 (285)
T ss_pred CCChhhEEEcCCCcEEEcccccchhhccCCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCC
Confidence 99999999999999999999988754332 257788999999988889999999999999999999999986421
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
. ...........+.. . ......+..+.+++.+||+.+|++|||+.|+++
T Consensus 220 ~--~~~~~~~~~~~~~~--------~---------------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 220 P--LQAMKRIRDNLPPK--------L---------------------KNLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred H--HHHHHHHHhcCCCC--------C---------------------cccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 1 00001011000000 0 011123457899999999999999999999986
No 292
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.97 E-value=5.3e-31 Score=249.92 Aligned_cols=192 Identities=24% Similarity=0.242 Sum_probs=150.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. +...++||||+.+++|.+++..... ..+++..+..++.|++.||+||| ..|++||
T Consensus 58 l~~~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~ 127 (316)
T cd05574 58 LDHPFLPTLYASFQT-----ETYLCLVMDYCPGGELFRLLQRQPG--KCLSEEVARFYAAEVLLALEYLH---LLGIVYR 127 (316)
T ss_pred CCCCCchhheeeeec-----CCEEEEEEEecCCCCHHHHHHhCCC--CccCHHHHHHHHHHHHHHHHHHH---HCCeecc
Confidence 469999999988533 5678999999999999999865432 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-----------------------------------CCCccccccccccCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-----------------------------------TNNFFNFQIAEYGMGS 303 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-----------------------------------~~~~~~y~aPE~~~~~ 303 (427)
||||+||+++.++.+||+|||.+...... ..|+..|+|||++.+.
T Consensus 128 dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~ 207 (316)
T cd05574 128 DLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGD 207 (316)
T ss_pred CCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCC
Confidence 99999999999999999999998754221 1467789999999988
Q ss_pred CcCccccchhHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchH
Q 042634 304 EVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVK 383 (427)
Q Consensus 304 ~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (427)
.++.++|||||||++|++++|+.||...... ..+... .+..... ....
T Consensus 208 ~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~-~~~~~~------------~~~~~~~-------------------~~~~ 255 (316)
T cd05574 208 GHGSAVDWWTLGILLYEMLYGTTPFKGSNRD-ETFSNI------------LKKEVTF-------------------PGSP 255 (316)
T ss_pred CCCchHHHHHHHHHHHHHhhCCCCCCCCchH-HHHHHH------------hcCCccC-------------------CCcc
Confidence 8999999999999999999999999753211 111110 0000000 0011
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCC----HHHHHH
Q 042634 384 ECLVSVLGIGVTCSSELPRERMN----MEEVAA 412 (427)
Q Consensus 384 ~~~~~~~~l~~~cl~~dP~~Rpt----~~ev~~ 412 (427)
..+.++.+++.+||+.||++||| ++|++.
T Consensus 256 ~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 256 PVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred ccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 14567899999999999999999 666665
No 293
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.97 E-value=7.4e-31 Score=245.91 Aligned_cols=141 Identities=23% Similarity=0.387 Sum_probs=120.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++++.. +...++||||+. ++|.+++.... ..+++..++.++.|++.||.||| +.||+||
T Consensus 60 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~-~~L~~~~~~~~---~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~ 127 (291)
T cd07844 60 LKHANIVTLHDIIHT-----KKTLTLVFEYLD-TDLKQYMDDCG---GGLSMHNVRLFLFQLLRGLAYCH---QRRVLHR 127 (291)
T ss_pred CCCcceeeEEEEEec-----CCeEEEEEecCC-CCHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeecc
Confidence 579999999988543 567899999996 58988876543 35889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||+||+++.++.+||+|||.++..... ..++..|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 128 dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~ 207 (291)
T cd07844 128 DLKPQNLLISERGELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGS 207 (291)
T ss_pred cCCHHHEEEcCCCCEEECccccccccCCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999998754321 245678999999875 45789999999999999999999999754
No 294
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.97 E-value=7.1e-31 Score=241.30 Aligned_cols=190 Identities=22% Similarity=0.273 Sum_probs=150.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. ....++++||+++++|.+++... ..+++..+..++.|++.|++||| +.||+|+
T Consensus 59 ~~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~ 126 (258)
T cd06632 59 LQHPNIVQYLGTERE-----EDNLYIFLELVPGGSLAKLLKKY----GSFPEPVIRLYTRQILLGLEYLH---DRNTVHR 126 (258)
T ss_pred cCCCCchheeeeEec-----CCeEEEEEEecCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccC
Confidence 579999999987533 46789999999999999998654 34889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCCCC-cCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSE-VSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~-~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||+|+||+++.++.+||+|||.+...... ..++..|+|||.+.... ++.++|+|||||++|++++|+.||....
T Consensus 127 dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~ 206 (258)
T cd06632 127 DIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLE 206 (258)
T ss_pred CCCHHHEEECCCCCEEEccCccceeccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCc
Confidence 99999999999999999999998865332 25778899999987766 8999999999999999999999997532
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
. ............. ...+...+..+.+++++||+.+|++|||++|++.
T Consensus 207 ~----~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 207 G----VAAVFKIGRSKEL----------------------------PPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred H----HHHHHHHHhcccC----------------------------CCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 1 1111000000000 0011224566789999999999999999999985
No 295
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-30 Score=251.98 Aligned_cols=233 Identities=21% Similarity=0.211 Sum_probs=166.5
Q ss_pred cccccchhhhccccccC-CCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 179 IRHRNLVKIITSCASVD-FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~-~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
++|||||+++++-.... +.-.....+|||||.+|||+..+++.... ..+++.+.+.++.+++.||.||| ++||+|
T Consensus 68 Lnh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~-~GLpE~e~l~lL~d~~~al~~Lr---En~IvH 143 (732)
T KOG4250|consen 68 LNHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENA-YGLPESEFLDLLSDLVSALRHLR---ENGIVH 143 (732)
T ss_pred cCchhhhhhcccCCccccCcccccceEEEeecCCCcHHHHhcCcccc-cCCCHHHHHHHHHHHHHHHHHHH---HcCcee
Confidence 45999999998743321 11245678999999999999999875543 56999999999999999999999 999999
Q ss_pred ccccCCceee--CC--CCceEecccccccccCCcC-----CCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCC
Q 042634 258 CDLKPSNVLL--DG--ELTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 258 rDlkp~NIll--~~--~~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~p 327 (427)
|||||.||++ ++ ....||+|||.|+.+.++. +||..|.+||.+.. +.|+..+|.|||||++||++||..|
T Consensus 144 RDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lP 223 (732)
T KOG4250|consen 144 RDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELP 223 (732)
T ss_pred ccCCCCcEEEeecCCCceEEeeecccccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCC
Confidence 9999999998 33 3468999999999988766 89999999999984 8899999999999999999999999
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC--
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM-- 405 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp-- 405 (427)
|....+.... .+.+..........++-..... ......+...-++..+ ........+-.++..++.++|++|-
T Consensus 224 F~p~~~pk~~-~~~~~~~~tkkp~~v~i~~~~~---eNgpv~~s~~lP~p~~-Ls~~l~~~~~kwLa~~L~~~~~~~~~~ 298 (732)
T KOG4250|consen 224 FIPFGGPKNN-KEIMWHIITKKPSGVAIGAQEE---ENGPVEWSSTLPQPNH-LSRGLATRLTKWLASMLEWNPRKRGHE 298 (732)
T ss_pred CCcCCCcccc-chhhhhhhccCCCceeEeeecc---cCCceeeeccCCCccc-ccHHHHhhhhHHHHHHHhhhHHHhCCC
Confidence 9865332211 1111111111111111100001 1111111122222111 2233455677788899999999999
Q ss_pred CHHHHHHHHHHHHHH
Q 042634 406 NMEEVAAQLLSFRNK 420 (427)
Q Consensus 406 t~~ev~~~L~~~~~~ 420 (427)
.+.+..+.+..|.+.
T Consensus 299 ~~~~~Fa~~~dIL~~ 313 (732)
T KOG4250|consen 299 GFDRFFAEVDDILNL 313 (732)
T ss_pred CcchHHHHHHHHHhh
Confidence 888888888877654
No 296
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.97 E-value=4.5e-31 Score=252.56 Aligned_cols=215 Identities=21% Similarity=0.259 Sum_probs=152.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+....+......++++||+. +++.+++.. ..+++..+..++.|++.||+||| +.||+||
T Consensus 60 l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-----~~l~~~~~~~i~~ql~~aL~~LH---~~~ivH~ 130 (336)
T cd07849 60 FKHENIIGILDIIRPPSFESFNDVYIVQELME-TDLYKLIKT-----QHLSNDHIQYFLYQILRGLKYIH---SANVLHR 130 (336)
T ss_pred CCCCCcCchhheeecccccccceEEEEehhcc-cCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecc
Confidence 45999999998876555545556899999994 688777654 34899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc---------CCCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA---------TNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPT 328 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~---------~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf 328 (427)
||||+||+++.++.+||+|||+++..... ..++..|+|||.+.+ ..++.++||||+||++|||++|+.||
T Consensus 131 dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f 210 (336)
T cd07849 131 DLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLF 210 (336)
T ss_pred CCCHHHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999765321 256778999998754 56899999999999999999999999
Q ss_pred CcccCCCccHHHHHHHhc----ccchhcccCccccccccccchhhhcccccccccc----chHHHHHHHHHHHhhcCCCC
Q 042634 329 NEMFTGNLTLHNFVKEAL----PERLAEIVDPVLLVEREEGETSKANAHKQFTRSF----SVKECLVSVLGIGVTCSSEL 400 (427)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~cl~~d 400 (427)
.+.... ..+ ..+...+ ++.+..+.+..... .. ...+..+.. ..+..+.++.+++.+||+.|
T Consensus 211 ~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d 279 (336)
T cd07849 211 PGKDYL-HQL-NLILGVLGTPSQEDLNCIISLRARN------YI---KSLPFKPKVPWNKLFPNADPKALDLLDKMLTFN 279 (336)
T ss_pred CCCCHH-HHH-HHHHHHcCCCCHHHHHHhhchhhhh------HH---hhcCcCCcccHHHHhcccCcHHHHHHHHHcCCC
Confidence 653110 011 1111111 11111111110000 00 000000000 01123567899999999999
Q ss_pred CCCCCCHHHHHHH
Q 042634 401 PRERMNMEEVAAQ 413 (427)
Q Consensus 401 P~~Rpt~~ev~~~ 413 (427)
|++|||+.|++++
T Consensus 280 P~~Rpt~~e~l~h 292 (336)
T cd07849 280 PHKRITVEEALAH 292 (336)
T ss_pred hhhCcCHHHHhcC
Confidence 9999999999876
No 297
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.97 E-value=9.5e-31 Score=245.48 Aligned_cols=191 Identities=19% Similarity=0.249 Sum_probs=151.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. ....++|+||+++++|.+++.+. .+++..+..++.|++.|+.||| +.|++||
T Consensus 73 l~hp~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~-----~l~~~~~~~i~~~l~~al~~LH---~~gi~H~ 139 (293)
T cd06647 73 NKHPNIVNYLDSYLV-----GDELWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLH---SNQVIHR 139 (293)
T ss_pred cCCCCeeehhheeee-----CCcEEEEEecCCCCcHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHH---hCCEeec
Confidence 579999999988543 56789999999999999988643 3788899999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC------CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||++....... .++..|+|||.+....++.++|||||||++||+++|+.||....
T Consensus 140 dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~ 219 (293)
T cd06647 140 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNEN 219 (293)
T ss_pred cCCHHHEEEcCCCCEEEccCcceecccccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999999887553322 56778999999988889999999999999999999999997532
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
.... .... .. .. . .....+...+..+.+++++||+.+|++|||++|++.
T Consensus 220 ~~~~-~~~~-~~----------~~--------~-----------~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 268 (293)
T cd06647 220 PLRA-LYLI-AT----------NG--------T-----------PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 268 (293)
T ss_pred hhhh-eeeh-hc----------CC--------C-----------CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1110 0000 00 00 0 000012224556889999999999999999999987
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
+
T Consensus 269 h 269 (293)
T cd06647 269 H 269 (293)
T ss_pred C
Confidence 5
No 298
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.97 E-value=1.9e-30 Score=250.01 Aligned_cols=224 Identities=17% Similarity=0.212 Sum_probs=152.6
Q ss_pred cccccchhhhccccccC-CCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 179 IRHRNLVKIITSCASVD-FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~-~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
++|||++++++.+.... +.+....++||||+ .++|.+.+.. .+++..+..++.|++.||+||| ..||+|
T Consensus 72 l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~------~l~~~~~~~~~~ql~~aL~~LH---~~gi~H 141 (353)
T cd07850 72 VNHKNIIGLLNVFTPQKSLEEFQDVYLVMELM-DANLCQVIQM------DLDHERMSYLLYQMLCGIKHLH---SAGIIH 141 (353)
T ss_pred cCCCCCcceeeeeccCCCccccCcEEEEEecc-CCCHHHHHhh------cCCHHHHHHHHHHHHHHHHHHH---hCCeee
Confidence 57999999998754321 22234579999999 5688777642 2788899999999999999999 899999
Q ss_pred ccccCCceeeCCCCceEecccccccccCCcC-----CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
|||||+||+++.++.+||+|||.++...... .++..|+|||.+.+..++.++|||||||++|+|++|+.||....
T Consensus 142 ~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~ 221 (353)
T cd07850 142 RDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTD 221 (353)
T ss_pred CCCCHHHEEECCCCCEEEccCccceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCC
Confidence 9999999999999999999999998764432 46778999999999999999999999999999999999997531
Q ss_pred CCCccHHHHHHHhc--ccchhcccCccccccccccc------hhhhccccccc--cccchHHHHHHHHHHHhhcCCCCCC
Q 042634 333 TGNLTLHNFVKEAL--PERLAEIVDPVLLVEREEGE------TSKANAHKQFT--RSFSVKECLVSVLGIGVTCSSELPR 402 (427)
Q Consensus 333 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~cl~~dP~ 402 (427)
. ...+........ +..+.+.++.........+. .........+. ........+.++.+++.+||+.||+
T Consensus 222 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 300 (353)
T cd07850 222 H-IDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPE 300 (353)
T ss_pred H-HHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChh
Confidence 1 111111111100 01111111110000000000 00000000000 0001223466788999999999999
Q ss_pred CCCCHHHHHHH
Q 042634 403 ERMNMEEVAAQ 413 (427)
Q Consensus 403 ~Rpt~~ev~~~ 413 (427)
+|||+.|+++.
T Consensus 301 ~R~t~~eiL~~ 311 (353)
T cd07850 301 KRISVDDALQH 311 (353)
T ss_pred hCcCHHHHhcC
Confidence 99999999864
No 299
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.97 E-value=7.2e-31 Score=250.50 Aligned_cols=141 Identities=21% Similarity=0.248 Sum_probs=123.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+|++|+++++.+. .....++||||+++|+|.+++.... ..+++..+..++.|++.||+||| ++||+||
T Consensus 58 ~~~~~i~~l~~~~~-----~~~~~~lv~Ey~~gg~L~~~l~~~~---~~l~~~~~~~~~~qi~~~L~~lH---~~~iiHr 126 (331)
T cd05624 58 GDCQWITTLHYAFQ-----DENYLYLVMDYYVGGDLLTLLSKFE---DRLPEDMARFYIAEMVLAIHSIH---QLHYVHR 126 (331)
T ss_pred CCCCCEeeEEEEEE-----cCCEEEEEEeCCCCCcHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeec
Confidence 57999999988743 3567899999999999999986532 35889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-------CCCccccccccccCC-----CCcCccccchhHHHHHHHHHhCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-------TNNFFNFQIAEYGMG-----SEVSTSGDVYSFGILLLETFTGKR 326 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-------~~~~~~y~aPE~~~~-----~~~~~~~DiwS~G~vl~ell~g~~ 326 (427)
||||+||+++.++.+||+|||+++..... ..|+..|+|||++.+ ..++.++|||||||++|||++|+.
T Consensus 127 Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~ 206 (331)
T cd05624 127 DIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGET 206 (331)
T ss_pred cCchHHEEEcCCCCEEEEeccceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCC
Confidence 99999999999999999999999765432 258899999999875 467899999999999999999999
Q ss_pred CCCc
Q 042634 327 PTNE 330 (427)
Q Consensus 327 pf~~ 330 (427)
||..
T Consensus 207 Pf~~ 210 (331)
T cd05624 207 PFYA 210 (331)
T ss_pred CccC
Confidence 9964
No 300
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.97 E-value=8.3e-31 Score=247.57 Aligned_cols=191 Identities=24% Similarity=0.321 Sum_probs=148.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++.+.+.. ....++||||+. |++.+++.... ..+++..+..++.|++.||.||| +.||+||
T Consensus 72 l~h~niv~~~~~~~~-----~~~~~lv~e~~~-g~l~~~~~~~~---~~l~~~~~~~~~~ql~~~L~~LH---~~~i~H~ 139 (307)
T cd06607 72 LRHPNTIEYKGCYLR-----EHTAWLVMEYCL-GSASDILEVHK---KPLQEVEIAAICHGALQGLAYLH---SHERIHR 139 (307)
T ss_pred CCCCCEEEEEEEEEe-----CCeEEEEHHhhC-CCHHHHHHHcc---cCCCHHHHHHHHHHHHHHHHHHH---HCCceec
Confidence 579999999998654 456799999995 67766664322 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC--CCccccccccccC---CCCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT--NNFFNFQIAEYGM---GSEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~--~~~~~y~aPE~~~---~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
||+|+||+++.++.+||+|||++....... .++..|+|||++. ...++.++||||||+++|||++|..||.....
T Consensus 140 dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~ 219 (307)
T cd06607 140 DIKAGNILLTEPGTVKLADFGSASLVSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA 219 (307)
T ss_pred CCCcccEEECCCCCEEEeecCcceecCCCCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccH
Confidence 999999999999999999999998664332 6778899999874 35688999999999999999999999865311
Q ss_pred CCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 042634 334 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQ 413 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~ 413 (427)
. ......... + ........++.++.+++.+||+.+|++|||+.+|+.+
T Consensus 220 ~-----~~~~~~~~~------~---------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 220 M-----SALYHIAQN------D---------------------SPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred H-----HHHHHHhcC------C---------------------CCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0 000000000 0 0001123356679999999999999999999999874
No 301
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.97 E-value=9.9e-31 Score=242.55 Aligned_cols=195 Identities=22% Similarity=0.296 Sum_probs=151.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. ....++||||+++++|.+++... ..+++..+..++.|++.||.||| +.+++||
T Consensus 65 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~ 132 (272)
T cd06629 65 LDHLNIVQYLGFETT-----EEYLSIFLEYVPGGSIGSCLRTY----GRFEEQLVRFFTEQVLEGLAYLH---SKGILHR 132 (272)
T ss_pred cCCCCcceEEEEecc-----CCceEEEEecCCCCcHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHh---hCCeeec
Confidence 469999999987543 56789999999999999998765 35889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCCCC--cCccccchhHHHHHHHHHhCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGSE--VSTSGDVYSFGILLLETFTGKRPT 328 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~--~~~~~DiwS~G~vl~ell~g~~pf 328 (427)
||||+||+++.++.+||+|||.++..... ..++..|+|||.+.... ++.++|+||||+++||+++|..||
T Consensus 133 dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~ 212 (272)
T cd06629 133 DLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPW 212 (272)
T ss_pred CCChhhEEEcCCCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999865321 25677899999987654 789999999999999999999998
Q ss_pred CcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 329 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
..... ..... ..........+. ......++.++.+++.+||+.+|++|||++
T Consensus 213 ~~~~~----~~~~~-~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 264 (272)
T cd06629 213 SDEEA----IAAMF-KLGNKRSAPPIP-----------------------PDVSMNLSPVALDFLNACFTINPDNRPTAR 264 (272)
T ss_pred cCcch----HHHHH-HhhccccCCcCC-----------------------ccccccCCHHHHHHHHHHhcCChhhCCCHH
Confidence 64211 11110 000000000000 001123466789999999999999999999
Q ss_pred HHHHH
Q 042634 409 EVAAQ 413 (427)
Q Consensus 409 ev~~~ 413 (427)
||+++
T Consensus 265 ~il~~ 269 (272)
T cd06629 265 ELLQH 269 (272)
T ss_pred HHhhC
Confidence 99864
No 302
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=3.2e-31 Score=253.21 Aligned_cols=191 Identities=22% Similarity=0.323 Sum_probs=155.6
Q ss_pred cccccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCee
Q 042634 177 NFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIV 256 (427)
Q Consensus 177 ~ll~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~iv 256 (427)
..+.|||||+++.+... ....|+||||+.+|.+++++.... ++.+..+..++.|+.+|++||| .++||
T Consensus 110 k~l~HPnIvkl~~v~~t-----~~~lylV~eya~~ge~~~yl~~~g----r~~e~~ar~~F~q~vsaveYcH---~k~iv 177 (596)
T KOG0586|consen 110 KSLNHPNIVKLFSVIET-----EATLYLVMEYASGGELFDYLVKHG----RMKEKEARAKFRQIVSAVEYCH---SKNIV 177 (596)
T ss_pred HhcCCcceeeeeeeeee-----cceeEEEEEeccCchhHHHHHhcc----cchhhhhhhhhHHHHHHHHHHh---hccee
Confidence 34789999999998544 567899999999999999998774 4677899999999999999999 99999
Q ss_pred eccccCCceeeCCCCceEecccccccccCCcC-----CCccccccccccCCCCc-CccccchhHHHHHHHHHhCCCCCCc
Q 042634 257 HCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGMGSEV-STSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 257 HrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~~~~~-~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
|||||++|||++.+..+||+|||++..+..+. .|++.|.|||++.+.+| ++.+|+||+|+++|-|+.|..||++
T Consensus 178 HrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG 257 (596)
T KOG0586|consen 178 HRDLKAENILLDENMNIKIADFGFSTFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDG 257 (596)
T ss_pred ccccchhhcccccccceeeeccccceeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCC
Confidence 99999999999999999999999999876543 89999999999999887 6789999999999999999999986
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
.. +.+.-++.+.+... .+.+ ...+..+++++++-.+|.+|++++++
T Consensus 258 ~~-----------------lk~Lr~rvl~gk~r-------------Ip~~----ms~dce~lLrk~lvl~Pskr~~~dqi 303 (596)
T KOG0586|consen 258 QN-----------------LKELRPRVLRGKYR-------------IPFY----MSCDCEDLLRKFLVLNPSKRGPCDQI 303 (596)
T ss_pred cc-----------------cccccchheeeeec-------------ccce----eechhHHHHHHhhccCccccCCHHHh
Confidence 31 11111111111110 0111 22345779999999999999999998
Q ss_pred HHH
Q 042634 411 AAQ 413 (427)
Q Consensus 411 ~~~ 413 (427)
.+.
T Consensus 304 m~~ 306 (596)
T KOG0586|consen 304 MKD 306 (596)
T ss_pred hhh
Confidence 753
No 303
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.97 E-value=1.2e-30 Score=243.91 Aligned_cols=216 Identities=21% Similarity=0.258 Sum_probs=151.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|+||+++++.+.. +...+++|||++++.+..+.... ..+++..+..++.|++.|++||| ..|++||
T Consensus 57 l~~~~i~~~~~~~~~-----~~~~~iv~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~ 124 (288)
T cd07833 57 LRHENIVNLKEAFRR-----KGRLYLVFEYVERTLLELLEASP----GGLPPDAVRSYIWQLLQAIAYCH---SHNIIHR 124 (288)
T ss_pred cCCCCeeehhheEEE-----CCEEEEEEecCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecC
Confidence 459999999998644 55789999999887766555433 34889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC-------CCccccccccccCCC-CcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT-------NNFFNFQIAEYGMGS-EVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~-------~~~~~y~aPE~~~~~-~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
||+|+||++++++.+||+|||.+....... .++..|+|||++.+. .++.++||||||+++|++++|+.||..
T Consensus 125 dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~ 204 (288)
T cd07833 125 DIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPG 204 (288)
T ss_pred CCCHHHeEECCCCCEEEEeeecccccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999999998754432 456779999999887 789999999999999999999999975
Q ss_pred ccCCCccHHHHHH--Hhcccchhccc--CccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC
Q 042634 331 MFTGNLTLHNFVK--EALPERLAEIV--DPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN 406 (427)
Q Consensus 331 ~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt 406 (427)
....+ .+..... ...+....... ++.... ................+..++.++.+++++||+.+|++|||
T Consensus 205 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps 278 (288)
T cd07833 205 DSDID-QLYLIQKCLGPLPPSHQELFSSNPRFAG-----VAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLT 278 (288)
T ss_pred CCHHH-HHHHHHHHhCCCCHHHhhhcccCccccc-----cccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhccc
Confidence 32111 1111000 00111000000 000000 00000000000000112234678999999999999999999
Q ss_pred HHHHHH
Q 042634 407 MEEVAA 412 (427)
Q Consensus 407 ~~ev~~ 412 (427)
++++++
T Consensus 279 ~~~il~ 284 (288)
T cd07833 279 CDELLQ 284 (288)
T ss_pred HHHHhc
Confidence 999975
No 304
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.97 E-value=2.9e-30 Score=238.78 Aligned_cols=193 Identities=22% Similarity=0.312 Sum_probs=151.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. +...++||||+++++|.+++... ..+++..+..++.|++.||+||| +.|++||
T Consensus 60 l~h~~iv~~~~~~~~-----~~~~~~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~ql~~al~~LH---~~~i~H~ 127 (268)
T cd06630 60 LNHPHIIRMLGATCE-----DSHFNLFVEWMAGGSVSHLLSKY----GAFKEAVIINYTEQLLRGLSYLH---ENQIIHR 127 (268)
T ss_pred cCCCceehhhceecc-----CCeEEEEEeccCCCcHHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecC
Confidence 579999999998543 56789999999999999988643 45889999999999999999999 8999999
Q ss_pred cccCCceeeCCCC-ceEecccccccccCCc----------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCC
Q 042634 259 DLKPSNVLLDGEL-TAHVGDFGLAKFLPEA----------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 259 Dlkp~NIll~~~~-~~kL~DFG~a~~~~~~----------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~p 327 (427)
||||+||+++.++ .+||+|||.+...... ..++..|+|||.+.+..++.++||||+||++|++++|..|
T Consensus 128 ~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p 207 (268)
T cd06630 128 DVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPP 207 (268)
T ss_pred CCCHHHEEEcCCCCEEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCC
Confidence 9999999998775 6999999998765432 1467789999999888899999999999999999999999
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
|...... ............ ......+...+.++.+++.+||+.+|++|||+
T Consensus 208 ~~~~~~~--~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~ 258 (268)
T cd06630 208 WNAEKHS--NHLALIFKIASA---------------------------TTAPSIPEHLSPGLRDVTLRCLELQPEDRPPS 258 (268)
T ss_pred CCCCCCc--chHHHHHHHhcc---------------------------CCCCCCchhhCHHHHHHHHHHcCCCcccCcCH
Confidence 8643111 111111000000 00001233456778999999999999999999
Q ss_pred HHHHH
Q 042634 408 EEVAA 412 (427)
Q Consensus 408 ~ev~~ 412 (427)
.|+++
T Consensus 259 ~~ll~ 263 (268)
T cd06630 259 RELLK 263 (268)
T ss_pred HHHhc
Confidence 99985
No 305
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.97 E-value=1.9e-30 Score=244.03 Aligned_cols=217 Identities=19% Similarity=0.217 Sum_probs=152.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|+|++++++.+.. +...++||||+ +|+|.+++.... ..+++..++.++.|+++||.||| +.||+||
T Consensus 59 ~~h~~i~~~~~~~~~-----~~~~~lv~e~~-~~~L~~~i~~~~---~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~ 126 (298)
T cd07841 59 LKHPNIIGLLDVFGH-----KSNINLVFEFM-ETDLEKVIKDKS---IVLTPADIKSYMLMTLRGLEYLH---SNWILHR 126 (298)
T ss_pred cCCCCChhhhheeec-----CCEEEEEEccc-CCCHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeec
Confidence 569999999998544 56789999999 999999987543 25899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC------CCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT------NNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~------~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||+||+++.++.+||+|||.++...... .++..|+|||.+.+ ..++.++|||||||++||+++|.+||...
T Consensus 127 dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~ 206 (298)
T cd07841 127 DLKPNNLLIASDGVLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGD 206 (298)
T ss_pred CCChhhEEEcCCCCEEEccceeeeeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCC
Confidence 999999999999999999999998764432 45667999998865 45789999999999999999998877643
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
.. ...+..... ................ .....................+.++.+++.+||+.||++|||++|++
T Consensus 207 ~~-~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l 280 (298)
T cd07841 207 SD-IDQLGKIFE-ALGTPTEENWPGVTSL----PDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQAL 280 (298)
T ss_pred cc-HHHHHHHHH-HcCCCchhhhhhcccc----cccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHh
Confidence 21 111111111 1100000000000000 00000000000000001123457789999999999999999999998
Q ss_pred HH
Q 042634 412 AQ 413 (427)
Q Consensus 412 ~~ 413 (427)
+.
T Consensus 281 ~~ 282 (298)
T cd07841 281 EH 282 (298)
T ss_pred hC
Confidence 73
No 306
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.97 E-value=1.5e-30 Score=248.75 Aligned_cols=223 Identities=18% Similarity=0.250 Sum_probs=153.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++.+.+.... ......++||||+ +++|.+++... ..+++..+..++.|++.||+||| ..||+||
T Consensus 61 l~h~~iv~~~~~~~~~~-~~~~~~~lv~e~~-~~~l~~~~~~~----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~ 131 (334)
T cd07855 61 FKHDNIIAIRDILRPPG-ADFKDVYVVMDLM-ESDLHHIIHSD----QPLTEEHIRYFLYQLLRGLKYIH---SANVIHR 131 (334)
T ss_pred cCCCCccCHHHhccccC-CCCceEEEEEehh-hhhHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecC
Confidence 46999999998764422 2345679999999 57898888654 34899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc----------CCCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA----------TNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~----------~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~p 327 (427)
||||+||++++++.+||+|||.++..... ..++..|+|||.+.+ ..++.++|||||||++|||++|+.|
T Consensus 132 dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~p 211 (334)
T cd07855 132 DLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQL 211 (334)
T ss_pred CCCHHHEEEcCCCcEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCc
Confidence 99999999999999999999999765321 256778999998765 5689999999999999999999999
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
|.+..... .+ ..+.........+..+.......... ...................+.++.+++.+||+.+|++|||+
T Consensus 212 f~~~~~~~-~~-~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~ 288 (334)
T cd07855 212 FPGKNYVH-QL-KLILSVLGSPSEEVLNRIGSDRVRKY-IQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITV 288 (334)
T ss_pred cCCCChHH-HH-HHHHHHhCCChhHhhhhhchhhHHHH-HhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCH
Confidence 97532111 11 11111111111111110000000000 00000000000000112346779999999999999999999
Q ss_pred HHHHHH
Q 042634 408 EEVAAQ 413 (427)
Q Consensus 408 ~ev~~~ 413 (427)
+|++..
T Consensus 289 ~~~l~~ 294 (334)
T cd07855 289 EQALQH 294 (334)
T ss_pred HHHHhC
Confidence 998874
No 307
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=9.1e-31 Score=237.88 Aligned_cols=179 Identities=24% Similarity=0.183 Sum_probs=144.2
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecc
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrD 259 (427)
.|||++++++.+.. ....+++|||+++|+|.+++... ..+++..+..++.|++.||+||| +.||+|||
T Consensus 43 ~~~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~d 110 (237)
T cd05576 43 CVPNMVCLHKYIVS-----EDSVFLVLQHAEGGKLWSHISKF----LNIPEECVKRWAAEMVVALDALH---REGIVCRD 110 (237)
T ss_pred CCCceeehhhheec-----CCeEEEEEecCCCCCHHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHH---hCCeeccC
Confidence 48999999988543 56789999999999999988654 34899999999999999999999 89999999
Q ss_pred ccCCceeeCCCCceEecccccccccCCcC---CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCCCc
Q 042634 260 LKPSNVLLDGELTAHVGDFGLAKFLPEAT---NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNL 336 (427)
Q Consensus 260 lkp~NIll~~~~~~kL~DFG~a~~~~~~~---~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~~~ 336 (427)
|||+||+++.++.+|++|||.+....... .++..|+|||......++.++||||+||++||+++|+.||......
T Consensus 111 lkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-- 188 (237)
T cd05576 111 LNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG-- 188 (237)
T ss_pred CCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh--
Confidence 99999999999999999999887654432 4556799999998888999999999999999999999887532100
Q ss_pred cHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 337 TLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
...... . ..+...+.++.+++.+|++.||++|||+.
T Consensus 189 -------------~~~~~~--~---------------------~~~~~~~~~~~~li~~~l~~dp~~R~~~~ 224 (237)
T cd05576 189 -------------INTHTT--L---------------------NIPEWVSEEARSLLQQLLQFNPTERLGAG 224 (237)
T ss_pred -------------cccccc--c---------------------CCcccCCHHHHHHHHHHccCCHHHhcCCC
Confidence 000000 0 01122345688999999999999999974
No 308
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.97 E-value=1.1e-30 Score=245.04 Aligned_cols=222 Identities=20% Similarity=0.217 Sum_probs=150.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+... .....++||||+. ++|.+++.... ..+++..++.++.|++.||+||| +.|++||
T Consensus 61 l~h~ni~~~~~~~~~~---~~~~~~lv~e~~~-~~L~~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~ 130 (293)
T cd07843 61 LQHPNIVTVKEVVVGS---NLDKIYMVMEYVE-HDLKSLMETMK---QPFLQSEVKCLMLQLLSGVAHLH---DNWILHR 130 (293)
T ss_pred cCCCCEEEEEEEEEec---CCCcEEEEehhcC-cCHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeec
Confidence 4699999998875431 1267899999995 58888876543 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCC-CcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGS-EVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~-~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||+||+++.++.+||+|||.++..... ..++..|+|||.+.+. .++.++||||+||++|||++|..||...
T Consensus 131 dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~ 210 (293)
T cd07843 131 DLKTSNLLLNNRGILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGK 210 (293)
T ss_pred cCCHHHEEECCCCcEEEeecCceeeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999999876443 2566789999998764 4689999999999999999999999753
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
.. ...+.... ....................................+.....++.+.+++++||+.||++|||++|++
T Consensus 211 ~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell 288 (293)
T cd07843 211 SE-IDQLNKIF-KLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDAL 288 (293)
T ss_pred Ch-HHHHHHHH-HHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHh
Confidence 21 11111111 11100000000000000000000000000000000111111356688999999999999999999998
Q ss_pred H
Q 042634 412 A 412 (427)
Q Consensus 412 ~ 412 (427)
.
T Consensus 289 ~ 289 (293)
T cd07843 289 K 289 (293)
T ss_pred c
Confidence 6
No 309
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.97 E-value=1.6e-30 Score=243.17 Aligned_cols=199 Identities=24% Similarity=0.242 Sum_probs=146.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccc-hhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPN-REALKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
..||||+++++.+.. ....+++|||+. +++.++.... ......+++..+..++.|++.||+|||+ ..+++|
T Consensus 60 ~~~~~iv~~~~~~~~-----~~~~~~~~e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~--~~~i~H 131 (288)
T cd06616 60 SDCPYIVKFYGALFR-----EGDCWICMELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE--ELKIIH 131 (288)
T ss_pred cCCCCEeeeeeEEec-----CCcEEEEEeccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh--cCCeec
Confidence 359999999987533 456789999984 5554433211 0111458999999999999999999993 359999
Q ss_pred ccccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCCC---CcCccccchhHHHHHHHHHhCCCCCC
Q 042634 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGS---EVSTSGDVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~---~~~~~~DiwS~G~vl~ell~g~~pf~ 329 (427)
|||||+||+++.++.+||+|||+++..... ..++..|+|||++... .++.++|||||||++||+++|+.||.
T Consensus 132 ~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 211 (288)
T cd06616 132 RDVKPSNILLDRNGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYP 211 (288)
T ss_pred cCCCHHHEEEccCCcEEEeecchhHHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCch
Confidence 999999999999999999999999765332 2577889999998776 68999999999999999999999997
Q ss_pred cccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 330 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
... ...+............ + .......++.++.+++.+||+.+|++|||++|
T Consensus 212 ~~~----~~~~~~~~~~~~~~~~-----~-------------------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ 263 (288)
T cd06616 212 KWN----SVFDQLTQVVKGDPPI-----L-------------------SNSEEREFSPSFVNFINLCLIKDESKRPKYKE 263 (288)
T ss_pred hcc----hHHHHHhhhcCCCCCc-----C-------------------CCcCCCccCHHHHHHHHHHccCChhhCcCHHH
Confidence 532 1111111111000000 0 00011235667899999999999999999999
Q ss_pred HHHH
Q 042634 410 VAAQ 413 (427)
Q Consensus 410 v~~~ 413 (427)
|++.
T Consensus 264 i~~~ 267 (288)
T cd06616 264 LLEH 267 (288)
T ss_pred HhcC
Confidence 9875
No 310
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.97 E-value=1.2e-30 Score=243.77 Aligned_cols=218 Identities=21% Similarity=0.271 Sum_probs=151.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+. .+...++||||+++++|..+.... ..+++..++.++.|++.||+||| +.|++||
T Consensus 57 l~h~~i~~~~~~~~-----~~~~~~lv~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~i~~~l~~LH---~~~i~h~ 124 (286)
T cd07846 57 LRHENLVNLIEVFR-----RKKRLYLVFEFVDHTVLDDLEKYP----NGLDESRVRKYLFQILRGIEFCH---SHNIIHR 124 (286)
T ss_pred cCCcchhhHHHhcc-----cCCeEEEEEecCCccHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccc
Confidence 57999999999854 356789999999998888776543 34889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||+|+||++++++.+||+|||++...... ..++..|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 125 ~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~ 204 (286)
T cd07846 125 DIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGD 204 (286)
T ss_pred CCCHHHEEECCCCcEEEEeeeeeeeccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCC
Confidence 99999999999999999999999865432 246778999999875 45788999999999999999999998643
Q ss_pred cCCCccHHHHHHH--hcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 332 FTGNLTLHNFVKE--ALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 332 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
.. ...+...... ..........+..........+... ...... ...+..+..+.+++.+||+.+|++|||+.|
T Consensus 205 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~ 279 (286)
T cd07846 205 SD-IDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVK--EIEPLE--KRFPKLSGLVLDLAKQCLRIDPDDRPSSSQ 279 (286)
T ss_pred ch-HHHHHHHHHHhCCCchhhHHHhccchHhhcccccccc--CcchHH--HhCCCcCHHHHHHHHHHhcCCcccchhHHH
Confidence 11 1111111100 0000000000000000000000000 000000 011234677999999999999999999999
Q ss_pred HHHH
Q 042634 410 VAAQ 413 (427)
Q Consensus 410 v~~~ 413 (427)
+++.
T Consensus 280 il~~ 283 (286)
T cd07846 280 LLHH 283 (286)
T ss_pred HhcC
Confidence 9863
No 311
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.97 E-value=1.5e-30 Score=243.00 Aligned_cols=218 Identities=20% Similarity=0.241 Sum_probs=149.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+. ++...++||||+. ++|.+++..... ..+++..+..++.|++.||+||| ..|++||
T Consensus 56 l~h~~i~~~~~~~~-----~~~~~~~v~e~~~-~~l~~~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lh---~~~i~H~ 124 (284)
T cd07860 56 LNHPNIVKLLDVIH-----TENKLYLVFEFLH-QDLKKFMDASPL--SGIPLPLIKSYLFQLLQGLAFCH---SHRVLHR 124 (284)
T ss_pred cCCCCCcchhhhcc-----cCCcEEEEeeccc-cCHHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecC
Confidence 47999999999854 3567899999994 688888764332 45889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCC-cCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSE-VSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~-~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||+|+||+++.++.+||+|||+++..... ..++..|+|||++.+.. ++.++|||||||++|||++|+.||...
T Consensus 125 ~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~ 204 (284)
T cd07860 125 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 204 (284)
T ss_pred CCCHHHEEECCCCCEEEeeccchhhcccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 99999999999999999999998765432 14567899999887644 588999999999999999999999753
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
.. .....+.......+ ....................+. ...+.. .....+.++.+++.+||+.||++|||++|++
T Consensus 205 ~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l 279 (284)
T cd07860 205 SE-IDQLFRIFRTLGTP-DEVVWPGVTSLPDYKPSFPKWA-RQDFSK--VVPPLDEDGRDLLSQMLHYDPNKRISAKAAL 279 (284)
T ss_pred CH-HHHHHHHHHHhCCC-ChhhhhhhhHHHHHHhhccccc-ccCHHH--HcccCCHHHHHHHHHhcCCCcccCCCHHHHh
Confidence 21 11111111111100 0000000000000000000000 000000 0112345678999999999999999999998
Q ss_pred H
Q 042634 412 A 412 (427)
Q Consensus 412 ~ 412 (427)
+
T Consensus 280 ~ 280 (284)
T cd07860 280 A 280 (284)
T ss_pred c
Confidence 5
No 312
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.97 E-value=1.8e-30 Score=243.23 Aligned_cols=188 Identities=24% Similarity=0.264 Sum_probs=150.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++++|.+++... ..+++..+..++.|++.||+||| +.||+||
T Consensus 58 l~h~~i~~~~~~~~~-----~~~~~~v~e~~~~~~L~~~~~~~----~~l~~~~~~~~~~qil~~l~~lH---~~~i~H~ 125 (290)
T cd05580 58 IRHPFLVNLYGSFQD-----DSNLYLVMEYVPGGELFSHLRKS----GRFPEPVARFYAAQVVLALEYLH---SLDIVYR 125 (290)
T ss_pred CCCCCccceeeEEEc-----CCeEEEEEecCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCEecC
Confidence 469999999987533 56789999999999999998655 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC---CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT---NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGN 335 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~---~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~~ 335 (427)
||+|+||+++.++.+||+|||+++...... .++..|+|||.+.+...+.++||||||+++|+|++|+.||....
T Consensus 126 dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--- 202 (290)
T cd05580 126 DLKPENLLLDSDGYIKITDFGFAKRVKGRTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN--- 202 (290)
T ss_pred CCCHHHEEECCCCCEEEeeCCCccccCCCCCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC---
Confidence 999999999999999999999998764432 57788999999988888999999999999999999999986532
Q ss_pred ccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC-----CHHHH
Q 042634 336 LTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM-----NMEEV 410 (427)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp-----t~~ev 410 (427)
............. ..+...+..+.+++.+||+.||.+|+ +++|+
T Consensus 203 --~~~~~~~~~~~~~-----------------------------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l 251 (290)
T cd05580 203 --PIQIYEKILEGKV-----------------------------RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDI 251 (290)
T ss_pred --HHHHHHHHhcCCc-----------------------------cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHH
Confidence 1111111000000 01112245688999999999999999 77777
Q ss_pred HH
Q 042634 411 AA 412 (427)
Q Consensus 411 ~~ 412 (427)
++
T Consensus 252 ~~ 253 (290)
T cd05580 252 KN 253 (290)
T ss_pred Hc
Confidence 64
No 313
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.97 E-value=2.1e-30 Score=244.93 Aligned_cols=223 Identities=18% Similarity=0.245 Sum_probs=148.5
Q ss_pred cccccchhhhccccccCCC---CCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 042634 179 IRHRNLVKIITSCASVDFQ---GNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~i 255 (427)
++||||+++++.+...... .....++||||+. ++|.+++.... ..+++.+++.++.|++.||+||| +.|+
T Consensus 68 l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH---~~~i 140 (310)
T cd07865 68 LKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCE-HDLAGLLSNKN---VKFTLSEIKKVMKMLLNGLYYIH---RNKI 140 (310)
T ss_pred CCCCCccceEEEEecccccccCCCceEEEEEcCCC-cCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---HCCe
Confidence 5799999999886553221 2234689999994 68877775432 35899999999999999999999 8999
Q ss_pred eeccccCCceeeCCCCceEecccccccccCCc----------CCCccccccccccCCC-CcCccccchhHHHHHHHHHhC
Q 042634 256 VHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA----------TNNFFNFQIAEYGMGS-EVSTSGDVYSFGILLLETFTG 324 (427)
Q Consensus 256 vHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~----------~~~~~~y~aPE~~~~~-~~~~~~DiwS~G~vl~ell~g 324 (427)
+|+||||+||+++.++.+||+|||.+...... ..++..|+|||.+.+. .++.++||||||+++|||++|
T Consensus 141 ~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~ 220 (310)
T cd07865 141 LHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTR 220 (310)
T ss_pred eccCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhC
Confidence 99999999999999999999999999765322 1456779999988664 468899999999999999999
Q ss_pred CCCCCcccCCCccHHHHHHH---hcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCC
Q 042634 325 KRPTNEMFTGNLTLHNFVKE---ALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELP 401 (427)
Q Consensus 325 ~~pf~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP 401 (427)
+.||..... ......+.. ..++......+.....+...... ..................+.+++.+||..||
T Consensus 221 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P 295 (310)
T cd07865 221 SPIMQGNTE--QHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQ---GQKRKVKERLKPYVKDPHALDLIDKLLVLDP 295 (310)
T ss_pred CCCCCCCCH--HHHHHHHHHHhCCCChhhcccccchhhhhhccCCC---ccchhhHHhcccccCCHHHHHHHHHHhcCCh
Confidence 999875321 111111111 11111100000000000000000 0000000000011123456889999999999
Q ss_pred CCCCCHHHHHHH
Q 042634 402 RERMNMEEVAAQ 413 (427)
Q Consensus 402 ~~Rpt~~ev~~~ 413 (427)
++|||++|++++
T Consensus 296 ~~R~t~~e~l~h 307 (310)
T cd07865 296 AKRIDADTALNH 307 (310)
T ss_pred hhccCHHHHhcC
Confidence 999999999853
No 314
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.97 E-value=2.3e-30 Score=240.76 Aligned_cols=190 Identities=22% Similarity=0.307 Sum_probs=149.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
..|||++++++.+.. +...++||||+++++|.+++... .+++..+..++.|++.||.||| ..||+||
T Consensus 59 ~~~~~vi~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~-----~l~~~~~~~i~~~i~~~l~~lh---~~~i~H~ 125 (277)
T cd06917 59 SQPPNITKYYGSYLK-----GPRLWIIMEYAEGGSVRTLMKAG-----PIAEKYISVIIREVLVALKYIH---KVGVIHR 125 (277)
T ss_pred CCCCCeeeEeeeeee-----CCEEEEEEecCCCCcHHHHHHcc-----CCCHHHHHHHHHHHHHHHHHHH---hCCcccC
Confidence 359999999987533 56789999999999999987543 4889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC------CCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT------NNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~------~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||+|+||+++.++.+||+|||.+....... .++..|+|||.+.+ ..++.++|||||||++|+|++|..||...
T Consensus 126 dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~ 205 (277)
T cd06917 126 DIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDV 205 (277)
T ss_pred CcCHHHEEEcCCCCEEEccCCceeecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCC
Confidence 999999999999999999999998764332 57778999998865 45689999999999999999999999753
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
... ..... .. ....+ .......+.++.+++.+||+.||++|||+.|++
T Consensus 206 ~~~-----~~~~~-~~----~~~~~----------------------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il 253 (277)
T cd06917 206 DAF-----RAMML-IP----KSKPP----------------------RLEDNGYSKLLREFVAACLDEEPKERLSAEELL 253 (277)
T ss_pred Chh-----hhhhc-cc----cCCCC----------------------CCCcccCCHHHHHHHHHHcCCCcccCcCHHHHh
Confidence 110 00000 00 00000 001111345689999999999999999999997
Q ss_pred HH
Q 042634 412 AQ 413 (427)
Q Consensus 412 ~~ 413 (427)
+.
T Consensus 254 ~~ 255 (277)
T cd06917 254 KS 255 (277)
T ss_pred hC
Confidence 64
No 315
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.96 E-value=2e-30 Score=248.21 Aligned_cols=225 Identities=21% Similarity=0.211 Sum_probs=155.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+...........++|+||+ +++|.+++... ..+++..+..++.|++.||+||| +.+++||
T Consensus 61 l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~ 132 (337)
T cd07858 61 LDHENVIAIKDIMPPPHREAFNDVYIVYELM-DTDLHQIIRSS----QTLSDDHCQYFLYQLLRGLKYIH---SANVLHR 132 (337)
T ss_pred cCCCCccchHHheecccccccCcEEEEEeCC-CCCHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---hCCEecC
Confidence 5799999999976543323334579999999 57888887654 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||+||+++.++.+||+|||+++..... ..++..|+|||.+.. ..++.++|||||||++|+|++|+.||.+.
T Consensus 133 dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 212 (337)
T cd07858 133 DLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGK 212 (337)
T ss_pred CCCHHHEEEcCCCCEEECcCccccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCC
Confidence 99999999999999999999999876433 156778999998765 46899999999999999999999999653
Q ss_pred cCCCccHHHHHHHh---cccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 332 FTGNLTLHNFVKEA---LPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 332 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
.. ...+....... .+..+..+.+..... .................+.++.++.+++++||+.+|++|||++
T Consensus 213 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ 286 (337)
T cd07858 213 DY-VHQLKLITELLGSPSEEDLGFIRNEKARR-----YIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVE 286 (337)
T ss_pred Ch-HHHHHHHHHHhCCCChHHhhhcCchhhhH-----HHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHH
Confidence 11 00111010000 001111111100000 0000000000000001123567789999999999999999999
Q ss_pred HHHHH--HHHH
Q 042634 409 EVAAQ--LLSF 417 (427)
Q Consensus 409 ev~~~--L~~~ 417 (427)
|++++ ++.+
T Consensus 287 ell~h~~~~~~ 297 (337)
T cd07858 287 EALAHPYLASL 297 (337)
T ss_pred HHHcCcchhhh
Confidence 99987 5544
No 316
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.5e-30 Score=237.76 Aligned_cols=220 Identities=22% Similarity=0.293 Sum_probs=169.8
Q ss_pred eccCCcccccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhh--
Q 042634 172 DLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHH-- 249 (427)
Q Consensus 172 ~L~~N~ll~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~-- 249 (427)
++.+.-+++|+||..++++=.. +-..-...++|.+|-+.|||++||... .++....++++..+|.||+|||.
T Consensus 255 EIYqTvmLRHENILgFIaaD~~-~~gs~TQLwLvTdYHe~GSL~DyL~r~-----tv~~~~ml~LalS~AsGLaHLH~eI 328 (513)
T KOG2052|consen 255 EIYQTVMLRHENILGFIAADNK-DNGSWTQLWLVTDYHEHGSLYDYLNRN-----TVTTEGMLKLALSIASGLAHLHMEI 328 (513)
T ss_pred HHHHHHHhccchhhhhhhcccc-CCCceEEEEEeeecccCCcHHHHHhhc-----cCCHHHHHHHHHHHhhhHHHHHHHH
Confidence 4556677999999999986221 112234679999999999999999764 38899999999999999999994
Q ss_pred ---cCCCCeeeccccCCceeeCCCCceEecccccccccCCc----------CCCccccccccccCCCCc-----C-cccc
Q 042634 250 ---YCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA----------TNNFFNFQIAEYGMGSEV-----S-TSGD 310 (427)
Q Consensus 250 ---~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~----------~~~~~~y~aPE~~~~~~~-----~-~~~D 310 (427)
+....|.|||||+.|||+..++.+-|+|+|+|...... .+||..|||||++...-- + ..+|
T Consensus 329 ~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~AD 408 (513)
T KOG2052|consen 329 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRAD 408 (513)
T ss_pred hcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHH
Confidence 33667999999999999999999999999999865443 389999999999865321 2 3589
Q ss_pred chhHHHHHHHHHhC----------CCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhcccccccccc
Q 042634 311 VYSFGILLLETFTG----------KRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSF 380 (427)
Q Consensus 311 iwS~G~vl~ell~g----------~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (427)
|||||.|+||++.+ ..||.+....+..+.++..-..-.+++..+...+
T Consensus 409 IYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW---------------------- 466 (513)
T KOG2052|consen 409 IYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRW---------------------- 466 (513)
T ss_pred HHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCccc----------------------
Confidence 99999999999853 4678777666666655433322222322222222
Q ss_pred chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHH
Q 042634 381 SVKECLVSVLGIGVTCSSELPRERMNMEEVAAQLLSFRN 419 (427)
Q Consensus 381 ~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~L~~~~~ 419 (427)
...++...+.++|+.||..+|..|-|+--|.+.|.++.+
T Consensus 467 ~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 467 KSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred ccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 234467789999999999999999999999999998864
No 317
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.96 E-value=2.4e-30 Score=238.07 Aligned_cols=190 Identities=22% Similarity=0.284 Sum_probs=152.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+. ++...++|+||+.+++|.+++... ..+++..+..++.|+++||.||| ..|++|+
T Consensus 57 l~h~~i~~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~~i~~~l~~lh---~~~i~h~ 124 (258)
T cd05578 57 LNHPFLVNLWYSFQ-----DEENMYLVVDLLLGGDLRYHLSQK----VKFSEEQVKFWICEIVLALEYLH---SKGIIHR 124 (258)
T ss_pred CCCCChHHHHHhhc-----CCCeEEEEEeCCCCCCHHHHHHhc----CCcCHHHHHHHHHHHHHHHHHHH---hCCeecc
Confidence 57999999998853 366789999999999999988654 35889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
||||+||++++++.+||+|||.+...... ..++..|+|||++....++.++|+||+|+++|++++|..||.....
T Consensus 125 dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~ 204 (258)
T cd05578 125 DIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSR 204 (258)
T ss_pred CCCHHHeEEcCCCCEEEeecccccccCCCccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCc
Confidence 99999999999999999999999876543 3677789999999888899999999999999999999999975422
Q ss_pred CCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH--HHHH
Q 042634 334 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM--EEVA 411 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~--~ev~ 411 (427)
. .......... . . ....+...+..+.+++.+||+.||.+||++ +|++
T Consensus 205 ~--~~~~~~~~~~-~-----~-----------------------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 205 T--IRDQIRAKQE-T-----A-----------------------DVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred c--HHHHHHHHhc-c-----c-----------------------cccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 1 1111111100 0 0 000222345778999999999999999999 6654
No 318
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.96 E-value=1.8e-30 Score=239.51 Aligned_cols=193 Identities=24% Similarity=0.323 Sum_probs=155.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCC-CCeee
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCE-TPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~-~~ivH 257 (427)
++|||++++++.+.. ....++||||+++++|.+++... ..+++..+..++.|+++|++||| + .|++|
T Consensus 56 l~~~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~~l~~~l~~lh---~~~~~~H 123 (264)
T cd06623 56 CESPYVVKCYGAFYK-----EGEISIVLEYMDGGSLADLLKKV----GKIPEPVLAYIARQILKGLDYLH---TKRHIIH 123 (264)
T ss_pred cCCCCeeeEEEEEcc-----CCeEEEEEEecCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHh---ccCCCcc
Confidence 459999999988543 46789999999999999998754 45899999999999999999999 8 99999
Q ss_pred ccccCCceeeCCCCceEecccccccccCCcC------CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEAT------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~DFG~a~~~~~~~------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
|||+|+||+++.++.+||+|||.+....... .++..|+|||.+....++.++||||||+++||+++|..||...
T Consensus 124 ~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~ 203 (264)
T cd06623 124 RDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPP 203 (264)
T ss_pred CCCCHHHEEECCCCCEEEccCccceecccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 9999999999999999999999998764433 4567899999999888999999999999999999999999764
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHH-HHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKE-CLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
.. ....+........... . .+.. .+..+.+++.+||+.+|++|||+.|+
T Consensus 204 ~~--~~~~~~~~~~~~~~~~---------------------------~-~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l 253 (264)
T cd06623 204 GQ--PSFFELMQAICDGPPP---------------------------S-LPAEEFSPEFRDFISACLQKDPKKRPSAAEL 253 (264)
T ss_pred cc--cCHHHHHHHHhcCCCC---------------------------C-CCcccCCHHHHHHHHHHccCChhhCCCHHHH
Confidence 32 1122221111100000 0 1111 45678999999999999999999999
Q ss_pred HHH
Q 042634 411 AAQ 413 (427)
Q Consensus 411 ~~~ 413 (427)
++.
T Consensus 254 l~~ 256 (264)
T cd06623 254 LQH 256 (264)
T ss_pred HhC
Confidence 874
No 319
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.96 E-value=2.9e-30 Score=238.15 Aligned_cols=192 Identities=26% Similarity=0.333 Sum_probs=149.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|+||+++++.+.. ....++|+||+++++|.+++... ..+++..+..++.|++.|++||| +.||+|+
T Consensus 56 l~~~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lh---~~~i~H~ 123 (264)
T cd06626 56 LKHPNLVKYYGVEVH-----REKVYIFMEYCSGGTLEELLEHG----RILDEHVIRVYTLQLLEGLAYLH---SHGIVHR 123 (264)
T ss_pred CCCCChhheeeeEec-----CCEEEEEEecCCCCcHHHHHhhc----CCCChHHHHHHHHHHHHHHHHHH---HCCcccC
Confidence 579999999987433 56789999999999999998754 34788999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc----------CCCccccccccccCCCC---cCccccchhHHHHHHHHHhCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA----------TNNFFNFQIAEYGMGSE---VSTSGDVYSFGILLLETFTGK 325 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~----------~~~~~~y~aPE~~~~~~---~~~~~DiwS~G~vl~ell~g~ 325 (427)
||+|+||+++.++.+||+|||.+...... ..++..|+|||++.+.. ++.++||||||+++||+++|+
T Consensus 124 dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~ 203 (264)
T cd06626 124 DIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGK 203 (264)
T ss_pred CCCHHHEEECCCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCC
Confidence 99999999999999999999999875432 24567899999988766 789999999999999999999
Q ss_pred CCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC
Q 042634 326 RPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM 405 (427)
Q Consensus 326 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp 405 (427)
.||....... .............+ .....++..+.+++.+||+.+|++||
T Consensus 204 ~pf~~~~~~~-~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~li~~~l~~~p~~R~ 253 (264)
T cd06626 204 RPWSELDNEF-QIMFHVGAGHKPPI-----------------------------PDSLQLSPEGKDFLDRCLESDPKKRP 253 (264)
T ss_pred CCccCCcchH-HHHHHHhcCCCCCC-----------------------------CcccccCHHHHHHHHHHccCCcccCC
Confidence 9997532110 00000000000000 00112355678999999999999999
Q ss_pred CHHHHHH
Q 042634 406 NMEEVAA 412 (427)
Q Consensus 406 t~~ev~~ 412 (427)
|++|++.
T Consensus 254 ~~~~i~~ 260 (264)
T cd06626 254 TASELLQ 260 (264)
T ss_pred CHHHHhc
Confidence 9999875
No 320
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.96 E-value=2.5e-30 Score=241.59 Aligned_cols=216 Identities=19% Similarity=0.218 Sum_probs=152.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. +...++||||+ +++|.+++.... ..+++.+++.++.|++.||+||| +.|++|+
T Consensus 56 ~~~~~i~~~~~~~~~-----~~~~~~v~e~~-~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~ 123 (286)
T cd07832 56 CQHPYVVKLLDVFPH-----GSGFVLVMEYM-PSDLSEVLRDEE---RPLPEAQVKSYMRMLLKGVAYMH---ANGIMHR 123 (286)
T ss_pred CCCCCCcceeeEEec-----CCeeEEEeccc-CCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecC
Confidence 459999999988543 56789999999 999999886543 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-------CCCccccccccccCCC-CcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-------TNNFFNFQIAEYGMGS-EVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-------~~~~~~y~aPE~~~~~-~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
||||+||+++.++.+||+|||.+...... ..++..|+|||++.+. .++.++||||+||++|||++|.+||..
T Consensus 124 dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~ 203 (286)
T cd07832 124 DLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPG 203 (286)
T ss_pred CcCHHHEEEcCCCcEEEeeeeecccccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCC
Confidence 99999999999999999999999876432 2567789999998654 468999999999999999999887764
Q ss_pred ccCCCccHHHHHHHhccc---chhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 331 MFTGNLTLHNFVKEALPE---RLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
... ...+.......... .+.+..+.. ................ ....+.+.++.+++.+|++.+|++|||+
T Consensus 204 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~R~~~ 276 (286)
T cd07832 204 END-IEQLAIVFRTLGTPNEETWPGLTSLP----DYNKITFPESKPIPLE--EIFPDASPEALDLLKGLLVYDPSKRLSA 276 (286)
T ss_pred CCH-HHHHHHHHHHcCCCChHHHhhccCcc----hhhcccCCCCCcchHH--HhCCCccHHHHHHHHHHhccChhhCCCH
Confidence 321 11111111111000 000000000 0000000000000000 0112235788999999999999999999
Q ss_pred HHHHHH
Q 042634 408 EEVAAQ 413 (427)
Q Consensus 408 ~ev~~~ 413 (427)
++++++
T Consensus 277 ~~~l~h 282 (286)
T cd07832 277 AEALRH 282 (286)
T ss_pred HHHhhC
Confidence 999864
No 321
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.96 E-value=1.5e-30 Score=243.88 Aligned_cols=220 Identities=17% Similarity=0.251 Sum_probs=146.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|+||+++.+.+.. +...++||||+ .+++.+++.... ..+++..+..++.|++.||+||| ..||+||
T Consensus 60 l~h~ni~~~~~~~~~-----~~~~~lv~e~~-~~~l~~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~ 127 (291)
T cd07870 60 LKHANIVLLHDIIHT-----KETLTFVFEYM-HTDLAQYMIQHP---GGLHPYNVRLFMFQLLRGLAYIH---GQHILHR 127 (291)
T ss_pred cCCCCEeEEEEEEec-----CCeEEEEEecc-cCCHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCcccC
Confidence 579999999887533 55789999999 477776664332 34778889999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||+||+++.++.+||+|||.++..... ..++..|+|||++.+ ..++.++|||||||++||+++|+.||...
T Consensus 128 dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~ 207 (291)
T cd07870 128 DLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGV 207 (291)
T ss_pred CCChHHEEEcCCCcEEEeccccccccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCc
Confidence 99999999999999999999998754321 246788999999875 45788999999999999999999999754
Q ss_pred cCCCccHHHHHHHh-cccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 332 FTGNLTLHNFVKEA-LPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 332 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
......+.+.+... .+.. ..................................+.++.+++.+|++.||++|||++|+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~ 285 (291)
T cd07870 208 SDVFEQLEKIWTVLGVPTE--DTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDA 285 (291)
T ss_pred hhHHHHHHHHHHHcCCCCh--hhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHH
Confidence 22111111111100 0000 00000000000000000000000000000000114567899999999999999999998
Q ss_pred HH
Q 042634 411 AA 412 (427)
Q Consensus 411 ~~ 412 (427)
+.
T Consensus 286 l~ 287 (291)
T cd07870 286 LL 287 (291)
T ss_pred hc
Confidence 75
No 322
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.96 E-value=1.6e-30 Score=244.13 Aligned_cols=223 Identities=17% Similarity=0.174 Sum_probs=150.3
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhh-hhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREA-LKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
+|||++++++.+...+..+....++||||++ ++|.+++...... ...+++..++.++.||+.||+||| +.||+||
T Consensus 59 ~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~ 134 (295)
T cd07837 59 ESIYIVRLLDVEHVEEKNGKPSLYLVFEYLD-SDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH---KHGVMHR 134 (295)
T ss_pred CCCCccceeeeEeecCCCCCceEEEEeeccC-cCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeec
Confidence 5799999998765533323334789999996 5888887543221 245899999999999999999999 8999999
Q ss_pred cccCCceeeCC-CCceEecccccccccCCc------CCCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 259 DLKPSNVLLDG-ELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~-~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
||||+||+++. ++.+||+|||.++..... ..+++.|+|||++.+ ..++.++|||||||++|||++|..||.+
T Consensus 135 dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~ 214 (295)
T cd07837 135 DLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPG 214 (295)
T ss_pred CCChHHEEEecCCCeEEEeecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCC
Confidence 99999999998 889999999999865322 245678999998865 4578999999999999999999999975
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
.... ............+. .......... ..........+.......+..+.++.+++.+||+.||++|||++|+
T Consensus 215 ~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~ei 288 (295)
T cd07837 215 DSEL-QQLLHIFKLLGTPT-EQVWPGVSKL----RDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAA 288 (295)
T ss_pred CCHH-HHHHHHHHHhCCCC-hhhCcchhhc----cchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHH
Confidence 3111 11111111100000 0000000000 0000000000000000112356778999999999999999999999
Q ss_pred HH
Q 042634 411 AA 412 (427)
Q Consensus 411 ~~ 412 (427)
+.
T Consensus 289 l~ 290 (295)
T cd07837 289 LT 290 (295)
T ss_pred hc
Confidence 75
No 323
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.96 E-value=5.9e-30 Score=239.06 Aligned_cols=220 Identities=20% Similarity=0.203 Sum_probs=155.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
+.|||++++++.+...+..+....+++|||+. ++|.+++..... ..+++..++.++.|++.||+||| +.+++|+
T Consensus 58 ~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~-~~l~~~l~~~~~--~~l~~~~~~~~~~~i~~al~~LH---~~~i~h~ 131 (287)
T cd07838 58 FEHPNIVRLLDVCHGPRTDRELKLTLVFEHVD-QDLATYLSKCPK--PGLPPETIKDLMRQLLRGVDFLH---SHRIVHR 131 (287)
T ss_pred cCCCCcceEEEEEeeccCCCCceeEEEehhcc-cCHHHHHHHccC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeec
Confidence 35999999999876644333345899999995 588888765332 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC-----CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
||+|+||+++.++.+||+|||.+....... .++..|+|||++.+..++.++|||||||++|||++|..||.....
T Consensus 132 ~l~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~ 211 (287)
T cd07838 132 DLKPQNILVTSDGQVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSE 211 (287)
T ss_pred cCChhhEEEccCCCEEEeccCcceeccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCCh
Confidence 999999999999999999999998764332 467789999999998999999999999999999999999875321
Q ss_pred CCccHHHHHHHhcc-cchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 334 GNLTLHNFVKEALP-ERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 334 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
...+......... ............. . .................+..+.+++.+||+.||++|||++|++.
T Consensus 212 -~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 212 -ADQLDKIFDVIGLPSEEEWPRNVSLPR-----S--SFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred -HHHHHHHHHHcCCCChHhcCCCcccch-----h--hcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 1112222111110 0000000000000 0 00000000001112334577889999999999999999999985
No 324
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.96 E-value=1.3e-30 Score=242.55 Aligned_cols=194 Identities=23% Similarity=0.261 Sum_probs=150.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. ....++||||+++++|.+++..... ..+++..+..++.|++.||.||| ..|++||
T Consensus 50 l~~~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~ 119 (277)
T cd05577 50 VSSRFIVSLAYAFET-----KDDLCLVMTLMNGGDLKYHIYNVGE--PGFPEARAIFYAAQIICGLEHLH---QRRIVYR 119 (277)
T ss_pred CCCCCEeeeeeEEec-----CCeEEEEEecCCCCcHHHHHHHcCc--CCCCHHHHHHHHHHHHHHHHHHH---hCCcccC
Confidence 469999999887533 5678999999999999998865432 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
||+|+||+++.++.+||+|||.+...... ..++..|+|||++.+..++.++||||+||++|+|++|+.||.....
T Consensus 120 di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~ 199 (277)
T cd05577 120 DLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKE 199 (277)
T ss_pred CCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcc
Confidence 99999999999999999999998765422 2567789999999888899999999999999999999999975322
Q ss_pred CCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC-----CHH
Q 042634 334 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM-----NME 408 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp-----t~~ 408 (427)
.. ..... ....... ....+...+..+.+++.+||+.||++|| ++.
T Consensus 200 ~~-~~~~~-~~~~~~~----------------------------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ 249 (277)
T cd05577 200 KV-EKEEL-KRRTLEM----------------------------AVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSAD 249 (277)
T ss_pred cc-cHHHH-Hhccccc----------------------------cccCCccCCHHHHHHHHHHccCChhHccCCCcccHH
Confidence 11 11111 0000000 0001122355688999999999999999 555
Q ss_pred HHHH
Q 042634 409 EVAA 412 (427)
Q Consensus 409 ev~~ 412 (427)
+++.
T Consensus 250 ~ll~ 253 (277)
T cd05577 250 EVRE 253 (277)
T ss_pred HHHh
Confidence 5554
No 325
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.96 E-value=4.1e-30 Score=240.98 Aligned_cols=191 Identities=22% Similarity=0.334 Sum_probs=150.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||+++.++.+.. +...+++|||+++++|.+++... .+++..+..++.|++.|++||| +.|++||
T Consensus 74 l~h~~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~ql~~~l~~lH---~~givH~ 140 (292)
T cd06657 74 YQHENVVEMYNSYLV-----GDELWVVMEFLEGGALTDIVTHT-----RMNEEQIAAVCLAVLKALSVLH---AQGVIHR 140 (292)
T ss_pred cCCcchhheeeEEEe-----CCEEEEEEecCCCCcHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH---HCCeecC
Confidence 569999999987543 56789999999999999877532 3788999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||.+...... ..++..|+|||.+.+..++.++||||+||++||+++|..||....
T Consensus 141 dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~ 220 (292)
T cd06657 141 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP 220 (292)
T ss_pred CCCHHHEEECCCCCEEEcccccceecccccccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999998765332 256778999999988889999999999999999999999986421
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
............+..+. .....+..+.+++.+||+.+|.+|||++|+++
T Consensus 221 --~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 221 --PLKAMKMIRDNLPPKLK-----------------------------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred --HHHHHHHHHhhCCcccC-----------------------------CcccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 11111111111111100 01123455788999999999999999999987
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
+
T Consensus 270 ~ 270 (292)
T cd06657 270 H 270 (292)
T ss_pred C
Confidence 3
No 326
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.96 E-value=2.8e-30 Score=240.66 Aligned_cols=219 Identities=17% Similarity=0.160 Sum_probs=149.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+|||++++++.+... .....++||||++ |++.+++.... ..+++.++..++.|++.||+||| ..|++||
T Consensus 55 ~~h~~i~~~~~~~~~~---~~~~~~lv~e~~~-~~l~~~l~~~~---~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~ 124 (282)
T cd07831 55 SPHPNILRLIEVLFDR---KTGRLALVFELMD-MNLYELIKGRK---RPLPEKRVKSYMYQLLKSLDHMH---RNGIFHR 124 (282)
T ss_pred CCCCCccceEEEEecC---CCCcEEEEEecCC-ccHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---HCCceec
Confidence 3599999999886441 1256799999995 68887775432 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC-----CCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++. +.+||+|||.++...... .++..|+|||++.. ..++.++||||+||++|||++|..||.+..
T Consensus 125 dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~ 203 (282)
T cd07831 125 DIKPENILIKD-DILKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTN 203 (282)
T ss_pred ccCHHHEEEcC-CCeEEEecccccccccCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCC
Confidence 99999999999 999999999998664322 46778999997654 557899999999999999999999997532
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
. .................. ......... ............. .......+.++.+++.+||+.+|++|||++|+++
T Consensus 204 ~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 204 E--LDQIAKIHDVLGTPDAEV-LKKFRKSRH-MNYNFPSKKGTGL-RKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred H--HHHHHHHHHHcCCCCHHH-HHhhccccc-ccccCcccccccH-HHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 1 111111111111000000 000000000 0000000000000 0011235788999999999999999999999986
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
.
T Consensus 279 ~ 279 (282)
T cd07831 279 H 279 (282)
T ss_pred C
Confidence 3
No 327
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.96 E-value=2.5e-30 Score=237.37 Aligned_cols=194 Identities=22% Similarity=0.261 Sum_probs=155.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++.+.+.. ....++||||+++++|.+++.........+++..+..++.|++.||+||| +.|++|+
T Consensus 56 l~~~~i~~~~~~~~~-----~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh---~~~i~h~ 127 (256)
T cd08530 56 VNHPNIISYKEAFLD-----GNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH---EQKILHR 127 (256)
T ss_pred CCCCCchhhhhhhcc-----CCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh---hCCcccC
Confidence 459999999887543 46789999999999999998664333356889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTG 334 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~ 334 (427)
||+|+||+++.++.+||+|||.++..... ..++..|+|||.+.+..++.++|+||+|+++||+++|+.||.....
T Consensus 128 ~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~- 206 (256)
T cd08530 128 DLKSANILLVANDLVKIGDLGISKVLKKNMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSM- 206 (256)
T ss_pred CCCcceEEEecCCcEEEeeccchhhhccCCcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-
Confidence 99999999999999999999999876443 2567789999999999999999999999999999999999975321
Q ss_pred CccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 042634 335 NLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQ 413 (427)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~ 413 (427)
..+...... .... ..+...+.++.+++.+||+.+|++|||+.|+++.
T Consensus 207 -~~~~~~~~~---~~~~----------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 207 -QDLRYKVQR---GKYP----------------------------PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred -HHHHHHHhc---CCCC----------------------------CCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 111111000 0000 0122456678999999999999999999999863
No 328
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.96 E-value=4.5e-30 Score=235.94 Aligned_cols=192 Identities=23% Similarity=0.311 Sum_probs=151.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|+|++++++.+.. +...++++||+++++|.+++..... ..+++..+..++.|++.||.||| +.+++|+
T Consensus 56 ~~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh---~~~i~H~ 125 (257)
T cd08225 56 MKHPNIVTFFASFQE-----NGRLFIVMEYCDGGDLMKRINRQRG--VLFSEDQILSWFVQISLGLKHIH---DRKILHR 125 (257)
T ss_pred CCCCChhhhhheecc-----CCeEEEEEecCCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHH---HCCcccc
Confidence 469999999987543 5678999999999999998865432 34789999999999999999999 8999999
Q ss_pred cccCCceeeCCCC-ceEecccccccccCCcC------CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGEL-TAHVGDFGLAKFLPEAT------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~-~~kL~DFG~a~~~~~~~------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||+||++++++ .+||+|||.+....... .++..|+|||+..+..++.++|+|||||++||+++|..||...
T Consensus 126 dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 205 (257)
T cd08225 126 DIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGN 205 (257)
T ss_pred cCCHHHEEEcCCCCeEEecccccchhccCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 9999999998875 57999999998764432 5777899999998888999999999999999999999998642
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
. ..+............ .....+.++.+++.+||+.+|++|||+.|++
T Consensus 206 ~-----~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll 252 (257)
T cd08225 206 N-----LHQLVLKICQGYFAP----------------------------ISPNFSRDLRSLISQLFKVSPRDRPSITSIL 252 (257)
T ss_pred c-----HHHHHHHHhcccCCC----------------------------CCCCCCHHHHHHHHHHhccChhhCcCHHHHh
Confidence 1 111111111110000 0112345688999999999999999999998
Q ss_pred HH
Q 042634 412 AQ 413 (427)
Q Consensus 412 ~~ 413 (427)
+.
T Consensus 253 ~~ 254 (257)
T cd08225 253 KR 254 (257)
T ss_pred hC
Confidence 63
No 329
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.96 E-value=1.5e-30 Score=246.59 Aligned_cols=146 Identities=21% Similarity=0.362 Sum_probs=120.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhh-hccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREAL-KNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~-~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
++|||++++++.+... .+...++||||++ +++.+++....... ..+++..++.++.|++.||+||| +.+|+|
T Consensus 59 l~h~~i~~~~~~~~~~---~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~h 131 (316)
T cd07842 59 LKHENVVSLVEVFLEH---ADKSVYLLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLH---SNWVLH 131 (316)
T ss_pred cCCCCccceEEEEeCC---CCceEEEEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHH---hCCEee
Confidence 5799999999986541 1357899999995 56766664332211 35889999999999999999999 899999
Q ss_pred ccccCCceeeCC----CCceEecccccccccCCc---------CCCccccccccccCC-CCcCccccchhHHHHHHHHHh
Q 042634 258 CDLKPSNVLLDG----ELTAHVGDFGLAKFLPEA---------TNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFT 323 (427)
Q Consensus 258 rDlkp~NIll~~----~~~~kL~DFG~a~~~~~~---------~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~ 323 (427)
|||||+||+++. ++.+||+|||+++..... ..++..|+|||++.+ ..++.++|||||||++|||++
T Consensus 132 ~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~ 211 (316)
T cd07842 132 RDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 211 (316)
T ss_pred CCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHh
Confidence 999999999999 899999999999865322 245778999998876 457899999999999999999
Q ss_pred CCCCCCcc
Q 042634 324 GKRPTNEM 331 (427)
Q Consensus 324 g~~pf~~~ 331 (427)
|+.||...
T Consensus 212 ~~~~~~~~ 219 (316)
T cd07842 212 LEPIFKGR 219 (316)
T ss_pred cCCCCcCC
Confidence 99999764
No 330
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=6.3e-31 Score=256.99 Aligned_cols=199 Identities=24% Similarity=0.384 Sum_probs=167.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||+++++++|... ...||++||+.|+|.++++.++ .++..+..+.|..|||+||.||| ++++|||
T Consensus 755 ldHpnl~RLLgvc~~s------~~qlvtq~mP~G~LlDyvr~hr---~~igsq~lLnw~~QIAkgM~YLe---~qrlVHr 822 (1177)
T KOG1025|consen 755 LDHPNLLRLLGVCMLS------TLQLVTQLMPLGCLLDYVREHR---DNIGSQDLLNWCYQIAKGMKYLE---EQRLVHR 822 (1177)
T ss_pred CCCchHHHHhhhcccc------hHHHHHHhcccchHHHHHHHhh---ccccHHHHHHHHHHHHHHHHHHH---hcchhhh
Confidence 7899999999998662 3789999999999999998766 56888999999999999999999 9999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC--------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT--------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~--------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~ 329 (427)
||..+|||+.+-..+||.|||+|+.+.... .-.+.|||-|.+....|+.++|||||||++||++| |..||+
T Consensus 823 dLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~ 902 (1177)
T KOG1025|consen 823 DLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYD 902 (1177)
T ss_pred hhhhhheeecCCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccC
Confidence 999999999999999999999999875543 23457999999999999999999999999999998 999998
Q ss_pred cccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 330 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
+....+ +.+.... ..+...|+.|+..++.+|.+||..|++.||+|+|
T Consensus 903 gi~~~e--I~dlle~-------------------------------geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fke 949 (1177)
T KOG1025|consen 903 GIPAEE--IPDLLEK-------------------------------GERLSQPPICTIDVYMVMVKCWMIDADSRPTFKE 949 (1177)
T ss_pred CCCHHH--hhHHHhc-------------------------------cccCCCCCCccHHHHHHHHHHhccCcccCccHHH
Confidence 752211 1111111 1112256779999999999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 042634 410 VAAQLLSFRNKLV 422 (427)
Q Consensus 410 v~~~L~~~~~~~~ 422 (427)
+.....++.....
T Consensus 950 l~~~fs~~ardpq 962 (1177)
T KOG1025|consen 950 LAEEFSRMARDPQ 962 (1177)
T ss_pred HHHHHHHHhcCcc
Confidence 9999999876543
No 331
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.96 E-value=2.8e-30 Score=241.40 Aligned_cols=193 Identities=22% Similarity=0.284 Sum_probs=153.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|+|++++++.+.. ....++++||+++++|.+++.... ..+++..+..++.|++.||.||| ..|++|+
T Consensus 72 l~~~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~lH---~~gi~H~ 140 (286)
T cd06614 72 CKHPNIVDYYDSYLV-----GDELWVVMEYMDGGSLTDIITQNF---VRMNEPQIAYVCREVLQGLEYLH---SQNVIHR 140 (286)
T ss_pred CCCCCeeEEEEEEEE-----CCEEEEEEeccCCCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHH---hCCeeeC
Confidence 579999999988644 467899999999999999987643 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||+|+||+++.++.+||+|||.+...... ..++..|+|||++.+..++.++|||||||++|+|++|+.||....
T Consensus 141 dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~ 220 (286)
T cd06614 141 DIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREP 220 (286)
T ss_pred CCChhhEEEcCCCCEEECccchhhhhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999998765432 146678999999988889999999999999999999999986431
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
.. ... ......... .......++..+.+++.+||+.+|.+|||+.|+++
T Consensus 221 ~~----~~~-~~~~~~~~~--------------------------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 221 PL----RAL-FLITTKGIP--------------------------PLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred HH----HHH-HHHHhcCCC--------------------------CCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 11 000 000000000 00012224567899999999999999999999986
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
.
T Consensus 270 ~ 270 (286)
T cd06614 270 H 270 (286)
T ss_pred C
Confidence 3
No 332
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.96 E-value=3.5e-30 Score=244.40 Aligned_cols=193 Identities=23% Similarity=0.328 Sum_probs=149.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. ....++||||+. |++.+.+.... ..+++.++..++.|++.|+.||| ..||+||
T Consensus 82 l~h~~iv~~~~~~~~-----~~~~~lv~e~~~-g~l~~~~~~~~---~~l~~~~~~~i~~~i~~~l~~lH---~~~i~H~ 149 (317)
T cd06635 82 IKHPNSIEYKGCYLR-----EHTAWLVMEYCL-GSASDLLEVHK---KPLQEVEIAAITHGALQGLAYLH---SHNMIHR 149 (317)
T ss_pred CCCCCEEEEEEEEee-----CCeEEEEEeCCC-CCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccC
Confidence 579999999998644 456799999995 57777664332 45889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc--CCCccccccccccC---CCCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA--TNNFFNFQIAEYGM---GSEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~--~~~~~~y~aPE~~~---~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
||+|+||+++.++.+||+|||.+...... ..++..|+|||++. ...++.++|||||||++|||++|..||.....
T Consensus 150 dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~ 229 (317)
T cd06635 150 DIKAGNILLTEPGQVKLADFGSASIASPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA 229 (317)
T ss_pred CCCcccEEECCCCCEEEecCCCccccCCcccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccH
Confidence 99999999999999999999998765443 26778899999974 35688999999999999999999999865311
Q ss_pred CCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 042634 334 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQ 413 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~ 413 (427)
. ...........+ .......+..+.+++.+||+.+|.+|||+.|+++.
T Consensus 230 ~-~~~~~~~~~~~~-------------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 277 (317)
T cd06635 230 M-SALYHIAQNESP-------------------------------TLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKH 277 (317)
T ss_pred H-HHHHHHHhccCC-------------------------------CCCCccccHHHHHHHHHHccCCcccCcCHHHHHhC
Confidence 0 001111000000 00122345568999999999999999999999986
Q ss_pred HH
Q 042634 414 LL 415 (427)
Q Consensus 414 L~ 415 (427)
.-
T Consensus 278 ~~ 279 (317)
T cd06635 278 MF 279 (317)
T ss_pred hh
Confidence 43
No 333
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.7e-30 Score=239.12 Aligned_cols=188 Identities=24% Similarity=0.288 Sum_probs=149.7
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecc
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrD 259 (427)
..+.||.+--. |...+..|+|+..|.||||.-++.+... ..|++..++.++.+|+.||++|| ..+||.||
T Consensus 243 ~s~FiVslaYA-----feTkd~LClVLtlMNGGDLkfHiyn~g~--~gF~e~ra~FYAAEi~cGLehlH---~~~iVYRD 312 (591)
T KOG0986|consen 243 SSPFIVSLAYA-----FETKDALCLVLTLMNGGDLKFHIYNHGN--PGFDEQRARFYAAEIICGLEHLH---RRRIVYRD 312 (591)
T ss_pred ccCcEEEEeee-----ecCCCceEEEEEeecCCceeEEeeccCC--CCCchHHHHHHHHHHHhhHHHHH---hcceeecc
Confidence 35666665444 5557789999999999999999877654 56999999999999999999999 99999999
Q ss_pred ccCCceeeCCCCceEecccccccccCCcC-----CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCC
Q 042634 260 LKPSNVLLDGELTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTG 334 (427)
Q Consensus 260 lkp~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~ 334 (427)
+||+|||+|+.|+++|+|.|+|..+.++. +||.+|||||++....|+..+|+||+||++|||+.|+.||......
T Consensus 313 LKPeNILLDd~GhvRISDLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeK 392 (591)
T KOG0986|consen 313 LKPENILLDDHGHVRISDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEK 392 (591)
T ss_pred CChhheeeccCCCeEeeccceEEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhh
Confidence 99999999999999999999999876543 8999999999999999999999999999999999999999643111
Q ss_pred CccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 335 NLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
. . .+-+|++...+.. ..++..+++..++.+..++.||++|--.
T Consensus 393 v-k-------------~eEvdrr~~~~~~----------------ey~~kFS~eakslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 393 V-K-------------REEVDRRTLEDPE----------------EYSDKFSEEAKSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred h-h-------------HHHHHHHHhcchh----------------hcccccCHHHHHHHHHHHccCHHHhccC
Confidence 0 0 0011111111110 0224456678889999999999998643
No 334
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.96 E-value=4.2e-30 Score=236.71 Aligned_cols=193 Identities=19% Similarity=0.220 Sum_probs=151.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. ....++|+||+++++|.+++.........+++..++.++.|++.|++||| +.|++|+
T Consensus 59 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~ 130 (260)
T cd08222 59 LDHPAIVKFHASFLE-----RDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMH---QRRILHR 130 (260)
T ss_pred CCCCcHHHHHHHHhc-----CCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHH---HcCcccc
Confidence 569999999988543 45689999999999999888653333356899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++. +.+||+|||.++..... ..++..|+|||.+.+..++.++|+||||+++|++++|..||....
T Consensus 131 ~l~~~nili~~-~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~ 209 (260)
T cd08222 131 DLKAKNIFLKN-NLLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN 209 (260)
T ss_pred CCChhheEeec-CCEeecccCceeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc
Confidence 99999999975 56999999998765332 256778999999988888999999999999999999999986421
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
............ . ...+..++.++.+++.+||+.+|++||++.|+++
T Consensus 210 -----~~~~~~~~~~~~-----~-----------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 210 -----FLSVVLRIVEGP-----T-----------------------PSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred -----HHHHHHHHHcCC-----C-----------------------CCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 111111110000 0 0012345667899999999999999999999986
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
.
T Consensus 257 ~ 257 (260)
T cd08222 257 N 257 (260)
T ss_pred C
Confidence 3
No 335
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.96 E-value=4.2e-30 Score=239.10 Aligned_cols=189 Identities=22% Similarity=0.307 Sum_probs=152.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. +...++||||+++++|.+++... .+++..+..++.|++.|+.||| +.|++|+
T Consensus 59 l~h~~iv~~~~~~~~-----~~~~~lv~e~~~~~~l~~~i~~~-----~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~ 125 (277)
T cd06641 59 CDSPYVTKYYGSYLK-----DTKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLH---SEKKIHR 125 (277)
T ss_pred cCCCCEeEEEEEEEe-----CCeEEEEEEeCCCCcHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHc---cCCeecC
Confidence 479999999988543 56789999999999999988643 4889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC------CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.++|+|||++....... .++..|+|||.+.+..++.++|||||||++|++++|..||....
T Consensus 126 dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~ 205 (277)
T cd06641 126 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELH 205 (277)
T ss_pred CCCHHhEEECCCCCEEEeecccceecccchhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccc
Confidence 999999999999999999999987654322 46778999999988888999999999999999999999986431
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
. ......+....+. .....++.++.+++.+||+.+|.+||+++|+++
T Consensus 206 ~--~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 252 (277)
T cd06641 206 P--MKVLFLIPKNNPP-------------------------------TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK 252 (277)
T ss_pred h--HHHHHHHhcCCCC-------------------------------CCCcccCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 1 0010000000000 011224566889999999999999999999999
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
+
T Consensus 253 ~ 253 (277)
T cd06641 253 H 253 (277)
T ss_pred C
Confidence 5
No 336
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.96 E-value=2.9e-30 Score=242.59 Aligned_cols=194 Identities=22% Similarity=0.271 Sum_probs=146.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
..||||+++++.+.. ....+++|||+ ++++.++..... ..+++..+..++.|++.|++|||+ ..||+||
T Consensus 71 ~~~~~i~~~~~~~~~-----~~~~~~v~e~~-~~~l~~l~~~~~---~~l~~~~~~~i~~~i~~~l~~lH~--~~~i~H~ 139 (296)
T cd06618 71 HDCPYIVKCYGYFIT-----DSDVFICMELM-STCLDKLLKRIQ---GPIPEDILGKMTVAIVKALHYLKE--KHGVIHR 139 (296)
T ss_pred cCCCchHhhheeeec-----CCeEEEEeecc-CcCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh--hCCEecC
Confidence 469999999998644 45789999998 556766654322 358899999999999999999993 2599999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC-----CCccccccccccCCCC----cCccccchhHHHHHHHHHhCCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGMGSE----VSTSGDVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~~~~----~~~~~DiwS~G~vl~ell~g~~pf~ 329 (427)
||+|+||+++.++.+||+|||.+....... .++..|+|||.+.+.. ++.++||||||+++|||++|+.||.
T Consensus 140 dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 219 (296)
T cd06618 140 DVKPSNILLDASGNVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYK 219 (296)
T ss_pred CCcHHHEEEcCCCCEEECccccchhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCC
Confidence 999999999999999999999997654322 4667899999987654 7889999999999999999999996
Q ss_pred cccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 330 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
...... +.............- ....++.++.+++.+||+.||++|||+++
T Consensus 220 ~~~~~~----~~~~~~~~~~~~~~~--------------------------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~ 269 (296)
T cd06618 220 NCKTEF----EVLTKILQEEPPSLP--------------------------PNEGFSPDFCSFVDLCLTKDHRKRPKYRE 269 (296)
T ss_pred cchhHH----HHHHHHhcCCCCCCC--------------------------CCCCCCHHHHHHHHHHccCChhhCCCHHH
Confidence 531111 111110000000000 00123566899999999999999999999
Q ss_pred HHHH
Q 042634 410 VAAQ 413 (427)
Q Consensus 410 v~~~ 413 (427)
+++.
T Consensus 270 il~~ 273 (296)
T cd06618 270 LLQH 273 (296)
T ss_pred HhcC
Confidence 9865
No 337
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.96 E-value=3.5e-30 Score=233.04 Aligned_cols=207 Identities=24% Similarity=0.389 Sum_probs=169.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccch----hhhhccCHHHHHHHHHHHHHHHHHHhhcCCCC
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNR----EALKNLNLLQRLSIAVDVASALDYLHHYCETP 254 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ 254 (427)
..|||+..+.+++.. ........+.++.-|+|..++...+ .....++..+...++.|++.|++||| .+|
T Consensus 344 ~sH~nll~V~~V~ie----~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh---~~~ 416 (563)
T KOG1024|consen 344 ASHPNLLSVLGVSIE----DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLH---NHG 416 (563)
T ss_pred CcCCCccceeEEEee----ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHH---hcC
Confidence 569999999998765 2355678889998899999987221 12245778899999999999999999 999
Q ss_pred eeeccccCCceeeCCCCceEecccccccccCC--------cCCCccccccccccCCCCcCccccchhHHHHHHHHHh-CC
Q 042634 255 IVHCDLKPSNVLLDGELTAHVGDFGLAKFLPE--------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GK 325 (427)
Q Consensus 255 ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~--------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~ 325 (427)
|||.||..+|++||+..++||+|-.+++.+-. +...+..||+||.+....|+.++|||||||++|||+| |+
T Consensus 417 ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~ 496 (563)
T KOG1024|consen 417 VIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGK 496 (563)
T ss_pred cccchhhhhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999997643 3356678999999999999999999999999999999 99
Q ss_pred CCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC
Q 042634 326 RPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM 405 (427)
Q Consensus 326 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp 405 (427)
.||.+... ..+..+..+.. +...|-+||++++.+|.-||..+|++||
T Consensus 497 ~PyaeIDP--fEm~~ylkdGy-------------------------------RlaQP~NCPDeLf~vMacCWallpeeRP 543 (563)
T KOG1024|consen 497 LPYAEIDP--FEMEHYLKDGY-------------------------------RLAQPFNCPDELFTVMACCWALLPEERP 543 (563)
T ss_pred CCccccCH--HHHHHHHhccc-------------------------------eecCCCCCcHHHHHHHHHHHhcCcccCC
Confidence 99875421 11222222111 1124667999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHhhc
Q 042634 406 NMEEVAAQLLSFRNKLVKNI 425 (427)
Q Consensus 406 t~~ev~~~L~~~~~~~~~~~ 425 (427)
+++|++.-|.++...+..+|
T Consensus 544 sf~Qlv~cLseF~~qlt~YV 563 (563)
T KOG1024|consen 544 SFSQLVICLSEFHTQLTRYV 563 (563)
T ss_pred CHHHHHHHHHHHHHHHhhcC
Confidence 99999999999988877654
No 338
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.96 E-value=4.7e-30 Score=237.09 Aligned_cols=198 Identities=24% Similarity=0.300 Sum_probs=152.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|+|++++++.+.. ....+++||++++++|.+++..... ...+++..+..++.|++.|++||| +.|++||
T Consensus 56 l~~~~i~~~~~~~~~-----~~~~~iv~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lh---~~~i~h~ 126 (267)
T cd06610 56 CNHPNVVKYYTSFVV-----GDELWLVMPYLSGGSLLDIMKSSYP-RGGLDEAIIATVLKEVLKGLEYLH---SNGQIHR 126 (267)
T ss_pred cCCCCEEEEEEEEee-----CCEEEEEEeccCCCcHHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHH---hCCeecC
Confidence 579999999887533 5678999999999999999865321 135889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC----------CCccccccccccCCC-CcCccccchhHHHHHHHHHhCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT----------NNFFNFQIAEYGMGS-EVSTSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~----------~~~~~y~aPE~~~~~-~~~~~~DiwS~G~vl~ell~g~~p 327 (427)
||||+||++++++.+||+|||.+....... .++..|+|||++... .++.++|+|||||++|||++|+.|
T Consensus 127 ~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p 206 (267)
T cd06610 127 DIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAP 206 (267)
T ss_pred CCCHHhEEEcCCCCEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCC
Confidence 999999999999999999999987654321 467789999998776 789999999999999999999999
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
|...... ..+.+.... .+.. . .........+.++.+++.+||+.||++|||+
T Consensus 207 ~~~~~~~-~~~~~~~~~-~~~~--------~------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~ 258 (267)
T cd06610 207 YSKYPPM-KVLMLTLQN-DPPS--------L------------------ETGADYKKYSKSFRKMISLCLQKDPSKRPTA 258 (267)
T ss_pred ccccChh-hhHHHHhcC-CCCC--------c------------------CCccccccccHHHHHHHHHHcCCChhhCcCH
Confidence 9754221 111111110 0000 0 0000112345678999999999999999999
Q ss_pred HHHHHH
Q 042634 408 EEVAAQ 413 (427)
Q Consensus 408 ~ev~~~ 413 (427)
+|+++.
T Consensus 259 ~~ll~~ 264 (267)
T cd06610 259 EELLKH 264 (267)
T ss_pred HHHhhC
Confidence 999863
No 339
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.96 E-value=9.6e-30 Score=237.27 Aligned_cols=218 Identities=19% Similarity=0.227 Sum_probs=151.2
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecc
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrD 259 (427)
+|||++++++.+.. +...++||||+ +|+|.+++..... ..+++..+..++.|++.||.||| +.|++|+|
T Consensus 56 ~h~~i~~~~~~~~~-----~~~~~lv~e~~-~~~l~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~d 124 (283)
T cd07830 56 EHPNIVKLKEVFRE-----NDELYFVFEYM-EGNLYQLMKDRKG--KPFSESVIRSIIYQILQGLAHIH---KHGFFHRD 124 (283)
T ss_pred CCCCchhHHHHhhc-----CCcEEEEEecC-CCCHHHHHHhccc--ccCCHHHHHHHHHHHHHHHHHHH---HCCcccCC
Confidence 39999999998644 56789999999 8899888865431 35899999999999999999999 89999999
Q ss_pred ccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 260 LKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 260 lkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
|+|+||+++.++.+||+|||.++..... ..++..|+|||++.. ..++.++||||||+++||+++|+.||.....
T Consensus 125 l~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~ 204 (283)
T cd07830 125 LKPENLLVSGPEVVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSE 204 (283)
T ss_pred CChhhEEEcCCCCEEEeecccceeccCCCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCCh
Confidence 9999999999999999999999866542 256778999998754 5578999999999999999999999965421
Q ss_pred CCccHHHHHHHhcccchhccc-CccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 334 GNLTLHNFVKEALPERLAEIV-DPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
. ..+..... .......... +....... ... .................+..+.+++++||+.||++|||++|++.
T Consensus 205 ~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 205 I-DQLYKICS-VLGTPTKQDWPEGYKLASK-LGF--RFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred H-HHHHHHHH-hcCCCChhhhhhHhhhhcc-ccc--cccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 1 11111111 1100000000 00000000 000 00000000000000112466899999999999999999999975
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
.
T Consensus 280 ~ 280 (283)
T cd07830 280 H 280 (283)
T ss_pred C
Confidence 3
No 340
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=8.7e-30 Score=235.88 Aligned_cols=213 Identities=23% Similarity=0.274 Sum_probs=157.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcC------C
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYC------E 252 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~------~ 252 (427)
+.|+||+++++.-..-+-. ....++|+||.+.|+|.+||..+. ++|....+++..+++||+|||+.. .
T Consensus 261 m~h~nIl~Fi~~ekr~t~~-~~eywLVt~fh~kGsL~dyL~~nt-----isw~~~cria~SmarGLa~LHee~p~~d~~K 334 (534)
T KOG3653|consen 261 MKHENILQFIGAEKRGTAD-RMEYWLVTEFHPKGSLCDYLKANT-----ISWNSLCRIAESMARGLAHLHEELPRGDHHK 334 (534)
T ss_pred ccchhHHHhhchhccCCcc-ccceeEEeeeccCCcHHHHHHhcc-----ccHHHHHHHHHHHHHHHHHhcccCCcCCCCC
Confidence 7899999999874432222 346799999999999999998753 899999999999999999999643 4
Q ss_pred CCeeeccccCCceeeCCCCceEecccccccccCCcC--------CCccccccccccCCCC-c-----CccccchhHHHHH
Q 042634 253 TPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT--------NNFFNFQIAEYGMGSE-V-----STSGDVYSFGILL 318 (427)
Q Consensus 253 ~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~--------~~~~~y~aPE~~~~~~-~-----~~~~DiwS~G~vl 318 (427)
.+|+|||||++||||..|+++-|+|||+|..+..+. +||.+|||||++.+.. + -.+.||||+|.|+
T Consensus 335 p~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVL 414 (534)
T KOG3653|consen 335 PPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVL 414 (534)
T ss_pred CccccccccccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHH
Confidence 579999999999999999999999999999875432 8999999999987643 2 2468999999999
Q ss_pred HHHHhCCCCCC------------cccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHH
Q 042634 319 LETFTGKRPTN------------EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECL 386 (427)
Q Consensus 319 ~ell~g~~pf~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (427)
||++++...+. ...+....+.++..-.+.++.+..+...+ ......
T Consensus 415 WEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W----------------------~~h~~~ 472 (534)
T KOG3653|consen 415 WEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAW----------------------RKHAGM 472 (534)
T ss_pred HHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhh----------------------hcCccH
Confidence 99998765442 11122222222211111111111111000 011235
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHH
Q 042634 387 VSVLGIGVTCSSELPRERMNMEEVAAQLLSFRN 419 (427)
Q Consensus 387 ~~~~~l~~~cl~~dP~~Rpt~~ev~~~L~~~~~ 419 (427)
.-+.+.+..||..||+.|-|+.=|.+++.++..
T Consensus 473 ~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~ 505 (534)
T KOG3653|consen 473 AVLCETIEECWDHDAEARLTAGCVEERMAELMM 505 (534)
T ss_pred HHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhc
Confidence 568889999999999999999999888887753
No 341
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.96 E-value=7.3e-30 Score=241.36 Aligned_cols=220 Identities=21% Similarity=0.225 Sum_probs=149.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|+|++++++.+... .....++||||+. ++|.+++.... ..+++.++..++.|++.||+||| +.|++||
T Consensus 63 l~h~~i~~~~~~~~~~---~~~~~~lv~e~~~-~~l~~~l~~~~---~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~ 132 (309)
T cd07845 63 LRHPNIVELKEVVVGK---HLDSIFLVMEYCE-QDLASLLDNMP---TPFSESQVKCLMLQLLRGLQYLH---ENFIIHR 132 (309)
T ss_pred CCCCCCcceEEEEecC---CCCeEEEEEecCC-CCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---hCCeecC
Confidence 5799999998875431 1245799999995 58888776432 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC------CCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT------NNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~------~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||+||+++.++.+||+|||.++...... .++..|+|||.+.+ ..++.++||||+||++|||++|+.||...
T Consensus 133 dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~ 212 (309)
T cd07845 133 DLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGK 212 (309)
T ss_pred CCCHHHEEECCCCCEEECccceeeecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999999999999999999999998764321 34567999999865 55789999999999999999999999753
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhcccccccc-ccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTR-SFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
. .......+.................... ...... ....... .......+.++.+++.+|++.||++|||++|+
T Consensus 213 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~i 287 (309)
T cd07845 213 S--EIEQLDLIIQLLGTPNESIWPGFSDLPL-VGKFTL--PKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEA 287 (309)
T ss_pred C--HHHHHHHHHHhcCCCChhhchhhhcccc-cccccc--cCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHH
Confidence 2 1111111111111110010000000000 000000 0000000 00001135667899999999999999999999
Q ss_pred HHH
Q 042634 411 AAQ 413 (427)
Q Consensus 411 ~~~ 413 (427)
+++
T Consensus 288 l~h 290 (309)
T cd07845 288 LES 290 (309)
T ss_pred hcC
Confidence 864
No 342
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.96 E-value=6.6e-30 Score=239.15 Aligned_cols=196 Identities=20% Similarity=0.206 Sum_probs=150.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+|||++++++.+ ..+...++||||+++|+|.+++... ..+++..+..++.|+++||+||| ..|++||
T Consensus 62 ~~~~~i~~~~~~~-----~~~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH---~~~~~H~ 129 (288)
T cd05583 62 RRCPFLVTLHYAF-----QTDTKLHLILDYVNGGELFTHLYQR----EHFTESEVRVYIAEIVLALDHLH---QLGIIYR 129 (288)
T ss_pred cCCcchhhhheee-----ecCCEEEEEEecCCCCcHHHHHhhc----CCcCHHHHHHHHHHHHHHHHHHH---HCCeecc
Confidence 3699999998874 3356789999999999999988654 34889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-------CCCccccccccccCCCC--cCccccchhHHHHHHHHHhCCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-------TNNFFNFQIAEYGMGSE--VSTSGDVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-------~~~~~~y~aPE~~~~~~--~~~~~DiwS~G~vl~ell~g~~pf~ 329 (427)
||||+||+++.++.+||+|||+++..... ..++..|+|||...+.. .+.++||||||+++|||++|..||.
T Consensus 130 dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~ 209 (288)
T cd05583 130 DIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFT 209 (288)
T ss_pred CCCHHHeEECCCCCEEEEECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcc
Confidence 99999999999999999999998764332 24678899999987655 7889999999999999999999986
Q ss_pred cccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 330 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
.... .............. . ...+...+..+.+++.+||+.||++|||+.+
T Consensus 210 ~~~~-~~~~~~~~~~~~~~----~-------------------------~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~ 259 (288)
T cd05583 210 VDGE-QNSQSEISRRILKS----K-------------------------PPFPKTMSAEARDFIQKLLEKDPKKRLGANG 259 (288)
T ss_pred cCcc-cchHHHHHHHHHcc----C-------------------------CCCCcccCHHHHHHHHHHhcCCHhhccCcch
Confidence 3211 11111111110000 0 0011223456889999999999999999888
Q ss_pred HHHHHHH
Q 042634 410 VAAQLLS 416 (427)
Q Consensus 410 v~~~L~~ 416 (427)
+.+.|+.
T Consensus 260 ~~~~l~~ 266 (288)
T cd05583 260 ADEIKNH 266 (288)
T ss_pred HHHHhcC
Confidence 8766553
No 343
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.96 E-value=5.4e-30 Score=236.23 Aligned_cols=190 Identities=23% Similarity=0.311 Sum_probs=149.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+. .+...++++||+++++|.+++... ..+++..+..++.|++.||+||| ..|++||
T Consensus 50 ~~h~~i~~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~ 117 (265)
T cd05579 50 AQSPYVVKLYYSFQ-----GKKNLYLVMEYLPGGDLASLLENV----GSLDEDVARIYIAEIVLALEYLH---SNGIIHR 117 (265)
T ss_pred CCCcchhHHHHhee-----cCcEEEEEEecCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HcCeecC
Confidence 45999999988743 356789999999999999988654 34899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc--------------CCCccccccccccCCCCcCccccchhHHHHHHHHHhC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA--------------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTG 324 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~--------------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g 324 (427)
||+|+||+++.++.+||+|||++...... ..++..|+|||.......+.++||||||+++||+++|
T Consensus 118 di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g 197 (265)
T cd05579 118 DLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVG 197 (265)
T ss_pred CCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhC
Confidence 99999999999999999999998764332 1466789999999888899999999999999999999
Q ss_pred CCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHH--HHHHHHHHHhhcCCCCCC
Q 042634 325 KRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKE--CLVSVLGIGVTCSSELPR 402 (427)
Q Consensus 325 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~cl~~dP~ 402 (427)
..||..... ........... .. .+.. .+..+.+++.+||+.+|+
T Consensus 198 ~~p~~~~~~-----~~~~~~~~~~~----~~-------------------------~~~~~~~~~~~~~~i~~~l~~~p~ 243 (265)
T cd05579 198 IPPFHGETP-----EEIFQNILNGK----IE-------------------------WPEDVEVSDEAIDLISKLLVPDPE 243 (265)
T ss_pred CCCCCCCCH-----HHHHHHHhcCC----cC-------------------------CCccccCCHHHHHHHHHHhcCCHh
Confidence 999965321 11111100000 00 0111 256789999999999999
Q ss_pred CCCCHHHHHHHH
Q 042634 403 ERMNMEEVAAQL 414 (427)
Q Consensus 403 ~Rpt~~ev~~~L 414 (427)
+|||+.++.+.|
T Consensus 244 ~Rpt~~~~~~~l 255 (265)
T cd05579 244 KRLGAKSIEEIK 255 (265)
T ss_pred hcCCCccHHHHh
Confidence 999995555443
No 344
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.96 E-value=6.8e-30 Score=241.39 Aligned_cols=193 Identities=22% Similarity=0.313 Sum_probs=148.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|+|++++.+.+.. ....++||||+. |++.+++.... ..+++.++..++.|++.|+.||| +.+++||
T Consensus 72 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~-~~l~~~~~~~~---~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~ 139 (308)
T cd06634 72 LRHPNTIQYRGCYLR-----EHTAWLVMEYCL-GSASDLLEVHK---KPLQEVEIAAVTHGALQGLAYLH---SHNMIHR 139 (308)
T ss_pred CCCCCcccEEEEEEc-----CCeeEEEEEccC-CCHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHH---hCCcccC
Confidence 569999999987544 457799999995 68777664332 45889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC--CCccccccccccC---CCCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT--NNFFNFQIAEYGM---GSEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~--~~~~~y~aPE~~~---~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
||||+||+++.++.+||+|||.+....... .++..|+|||.+. ...++.++|||||||++|||++|..||.....
T Consensus 140 dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~ 219 (308)
T cd06634 140 DVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA 219 (308)
T ss_pred CCCHHhEEECCCCcEEECCcccceeecCcccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccH
Confidence 999999999999999999999988654432 6778899999974 34578899999999999999999999865311
Q ss_pred CCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 042634 334 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQ 413 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~ 413 (427)
.. .......... ........+..+.+++.+||+.+|++|||+++++..
T Consensus 220 ~~-~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~ 267 (308)
T cd06634 220 MS-ALYHIAQNES-------------------------------PALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 267 (308)
T ss_pred HH-HHHHHhhcCC-------------------------------CCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence 10 0000000000 000112345668899999999999999999999876
Q ss_pred HH
Q 042634 414 LL 415 (427)
Q Consensus 414 L~ 415 (427)
--
T Consensus 268 ~~ 269 (308)
T cd06634 268 RF 269 (308)
T ss_pred cc
Confidence 43
No 345
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.96 E-value=1.3e-29 Score=236.37 Aligned_cols=218 Identities=20% Similarity=0.228 Sum_probs=153.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. +...++++||++ +++.+++.... ..+++..+..++.|++.||.||| ..+|+|+
T Consensus 55 l~~~~i~~~~~~~~~-----~~~~~~v~e~~~-~~l~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~ 122 (283)
T cd05118 55 LNHPNIIKLLDVFRH-----KGDLYLVFEFMD-TDLYKLIKDRQ---RGLPESLIKSYLYQLLQGLAFCH---SHGILHR 122 (283)
T ss_pred hcCCCcchHHHhhcc-----CCCEEEEEeccC-CCHHHHHHhhc---ccCCHHHHHHHHHHHHHHHHHHH---HCCeeec
Confidence 469999999998543 567899999995 58888776532 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC------CCccccccccccCCC-CcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT------NNFFNFQIAEYGMGS-EVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~------~~~~~y~aPE~~~~~-~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||+||+++.++.+||+|||.+....... .++..|+|||.+.+. .++.++||||+|+++|++++|+.||...
T Consensus 123 dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~ 202 (283)
T cd05118 123 DLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGK 202 (283)
T ss_pred CcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 999999999999999999999998765432 466789999998876 7899999999999999999999999653
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
.. ...+.... ....................... ..............+..+.++.+++.+||+.||.+||+++|++
T Consensus 203 ~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll 278 (283)
T cd05118 203 SE-IDQLFKIF-RTLGTPDPEVWPKFTSLARNYKF--SFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQAL 278 (283)
T ss_pred CH-HHHHHHHH-HHcCCCchHhcccchhhhhhhhh--hhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHh
Confidence 21 11111111 11110000000000000000000 0000000000112234678899999999999999999999998
Q ss_pred H
Q 042634 412 A 412 (427)
Q Consensus 412 ~ 412 (427)
.
T Consensus 279 ~ 279 (283)
T cd05118 279 A 279 (283)
T ss_pred h
Confidence 6
No 346
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=8e-30 Score=225.18 Aligned_cols=202 Identities=22% Similarity=0.276 Sum_probs=155.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
..|+||+++++. |.++...|+|||-|.||.|...++++ +.|++.++..+.++|+.||.||| .+||.||
T Consensus 133 qgh~nilqLief-----FEdd~~FYLVfEKm~GGplLshI~~~----~~F~E~EAs~vvkdia~aLdFlH---~kgIAHR 200 (463)
T KOG0607|consen 133 QGHKNILQLIEF-----FEDDTRFYLVFEKMRGGPLLSHIQKR----KHFNEREASRVVKDIASALDFLH---TKGIAHR 200 (463)
T ss_pred cCCccHHHHHHH-----hcccceEEEEEecccCchHHHHHHHh----hhccHHHHHHHHHHHHHHHHHHh---hcCcccc
Confidence 579999999998 55578899999999999999999876 45999999999999999999999 9999999
Q ss_pred cccCCceeeCCC---CceEecccccccccCCc-------------CCCccccccccccC-----CCCcCccccchhHHHH
Q 042634 259 DLKPSNVLLDGE---LTAHVGDFGLAKFLPEA-------------TNNFFNFQIAEYGM-----GSEVSTSGDVYSFGIL 317 (427)
Q Consensus 259 Dlkp~NIll~~~---~~~kL~DFG~a~~~~~~-------------~~~~~~y~aPE~~~-----~~~~~~~~DiwS~G~v 317 (427)
|+||+|||-... .-+|||||.++.-.... .+|+..|||||+.. ...|+.++|.||+|||
T Consensus 201 DlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvI 280 (463)
T KOG0607|consen 201 DLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVI 280 (463)
T ss_pred cCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHH
Confidence 999999998544 36899999887643211 16777899999863 2458999999999999
Q ss_pred HHHHHhCCCCCCcccCCCccHH-----HHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHH
Q 042634 318 LLETFTGKRPTNEMFTGNLTLH-----NFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGI 392 (427)
Q Consensus 318 l~ell~g~~pf~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 392 (427)
+|-|++|.+||.+..+.+-.+. ...+..+-+.+.+ .... .+...+...+.+..++
T Consensus 281 lYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQE---GkYe-----------------FPdkdWahIS~eakdl 340 (463)
T KOG0607|consen 281 LYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQE---GKYE-----------------FPDKDWAHISSEAKDL 340 (463)
T ss_pred HHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhc---cCCc-----------------CChhhhHHhhHHHHHH
Confidence 9999999999998655433222 1222222111111 1000 1111345567788999
Q ss_pred HhhcCCCCCCCCCCHHHHHH
Q 042634 393 GVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 393 ~~~cl~~dP~~Rpt~~ev~~ 412 (427)
+...+..||.+|-++.+++.
T Consensus 341 isnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 341 ISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred HHHHHhccHHhhhhhhhccC
Confidence 99999999999999998876
No 347
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.96 E-value=1.1e-29 Score=242.32 Aligned_cols=229 Identities=19% Similarity=0.191 Sum_probs=157.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++.+.+......+....+++|||++ ++|.+++... ..+++..+..++.|++.||+||| +.||+||
T Consensus 56 l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~----~~l~~~~~~~i~~~l~~~l~~LH---~~gi~H~ 127 (330)
T cd07834 56 LRHENIIGLLDILRPPSPEDFNDVYIVTELME-TDLHKVIKSP----QPLTDDHIQYFLYQILRGLKYLH---SANVIHR 127 (330)
T ss_pred cCCcchhhhhhhhcccCcccccceEEEecchh-hhHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecC
Confidence 45999999999865533223346799999996 6888888654 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC---------CCccccccccccCCC-CcCccccchhHHHHHHHHHhCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT---------NNFFNFQIAEYGMGS-EVSTSGDVYSFGILLLETFTGKRPT 328 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~---------~~~~~y~aPE~~~~~-~~~~~~DiwS~G~vl~ell~g~~pf 328 (427)
||||+||+++.++.+||+|||.+....... .++..|+|||++.+. .++.++||||+||++|+|++|+.||
T Consensus 128 dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf 207 (330)
T cd07834 128 DLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLF 207 (330)
T ss_pred CCCHHHEEEcCCCCEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCc
Confidence 999999999999999999999998764432 456789999999887 7899999999999999999999999
Q ss_pred CcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 329 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
...... ..+.. +.........+................ ................+..+.+++.+||+.+|++|||++
T Consensus 208 ~~~~~~-~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~ 284 (330)
T cd07834 208 PGRDYI-DQLNL-IVEVLGTPSEEDLKFITSEKARNYLKS-LPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITAD 284 (330)
T ss_pred CCCCHH-HHHHH-HHHhcCCCChhHhhhccccchhhHHhh-cccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHH
Confidence 754211 11111 111111000000000000000000000 000000000001122466789999999999999999999
Q ss_pred HHHHH--HHHHH
Q 042634 409 EVAAQ--LLSFR 418 (427)
Q Consensus 409 ev~~~--L~~~~ 418 (427)
++++. ++.++
T Consensus 285 ~ll~~~~~~~~~ 296 (330)
T cd07834 285 EALAHPYLAQLH 296 (330)
T ss_pred HHHhCccHHhhc
Confidence 99975 44443
No 348
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.96 E-value=7.4e-30 Score=234.21 Aligned_cols=194 Identities=23% Similarity=0.333 Sum_probs=154.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||+++..+.+.. ....++++||+++++|.+++.........+++..+..++.|++.||.||| +.|++|+
T Consensus 56 l~~~~~~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~~~H~ 127 (258)
T cd08215 56 LNHPNIIKYYESFEE-----KGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH---SRKILHR 127 (258)
T ss_pred cCCCChhheEEEEec-----CCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecc
Confidence 459999999887433 46789999999999999998764322256899999999999999999999 8899999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||+|+||+++.++.+||+|||.+...... ..++..|+|||...+..++.++|+||+|+++|++++|+.||....
T Consensus 128 dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~ 207 (258)
T cd08215 128 DIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN 207 (258)
T ss_pred cCChHHeEEcCCCcEEECCccceeecccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc
Confidence 99999999999999999999999875443 256778999999988889999999999999999999999986531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
..+......... ..+ .+..++.++.+++.+||..+|++|||+.|+++
T Consensus 208 -----~~~~~~~~~~~~----~~~------------------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 208 -----LLELALKILKGQ----YPP------------------------IPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred -----HHHHHHHHhcCC----CCC------------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 111111111000 000 11124566899999999999999999999986
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
.
T Consensus 255 ~ 255 (258)
T cd08215 255 S 255 (258)
T ss_pred C
Confidence 3
No 349
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.96 E-value=7.9e-30 Score=237.90 Aligned_cols=218 Identities=20% Similarity=0.231 Sum_probs=149.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. +...+++|||+ +++|.+++..... ..+++..+..++.|++.||+||| +.+++||
T Consensus 55 l~~~~iv~~~~~~~~-----~~~~~iv~e~~-~~~l~~~~~~~~~--~~~~~~~~~~~~~~i~~~L~~lH---~~~~~H~ 123 (283)
T cd07835 55 LNHPNIVRLLDVVHS-----ENKLYLVFEFL-DLDLKKYMDSSPL--TGLDPPLIKSYLYQLLQGIAYCH---SHRVLHR 123 (283)
T ss_pred cCCCCccCHhheecc-----CCeEEEEEecc-CcCHHHHHhhCCC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeCC
Confidence 469999999998543 56789999999 5789888865432 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCC-CcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGS-EVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~-~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||+|+||+++.++.+||+|||.++..... ..++..|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 124 dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 203 (283)
T cd07835 124 DLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGD 203 (283)
T ss_pred CCCHHHEEEcCCCcEEEeecccccccCCCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999999765321 2456789999987654 5789999999999999999999999653
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
.. .....+........ ..................... ............+.++.+++.+||+.||++|||++|++
T Consensus 204 ~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il 278 (283)
T cd07835 204 SE-IDQLFRIFRTLGTP-DEDVWPGVTSLPDYKPTFPKW---ARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAAL 278 (283)
T ss_pred CH-HHHHHHHHHHhCCC-ChHHhhhhhhchhhhhhcccc---cccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHh
Confidence 11 11111111111000 000000000000000000000 00000001112345688999999999999999999998
Q ss_pred H
Q 042634 412 A 412 (427)
Q Consensus 412 ~ 412 (427)
+
T Consensus 279 ~ 279 (283)
T cd07835 279 Q 279 (283)
T ss_pred c
Confidence 5
No 350
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.96 E-value=4.3e-29 Score=216.10 Aligned_cols=169 Identities=21% Similarity=0.226 Sum_probs=128.8
Q ss_pred CCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccccCCceeeCCCCceEecccccccccCCc-CCC
Q 042634 212 GSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA-TNN 290 (427)
Q Consensus 212 g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~-~~~ 290 (427)
|+|.+++.... ..+++.+++.++.|++.||+||| +.+ ||+||+++.++.+|+ ||.++..... ..|
T Consensus 1 GsL~~~l~~~~---~~l~~~~~~~i~~qi~~~L~~lH---~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~~~g 66 (176)
T smart00750 1 VSLADILEVRG---RPLNEEEIWAVCLQCLRALRELH---RQA------KSGNILLTWDGLLKL--DGSVAFKTPEQSRV 66 (176)
T ss_pred CcHHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHH---hcC------CcccEeEcCccceee--ccceEeeccccCCC
Confidence 67888886532 45999999999999999999999 666 999999999999999 9999876443 378
Q ss_pred ccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhh
Q 042634 291 FFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKA 370 (427)
Q Consensus 291 ~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (427)
+..|+|||++.+..++.++|||||||++|||++|+.||.........+........+... . .
T Consensus 67 ~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~----~--------~------ 128 (176)
T smart00750 67 DPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDP----R--------D------ 128 (176)
T ss_pred cccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCc----c--------c------
Confidence 899999999999999999999999999999999999996532211112221111110000 0 0
Q ss_pred ccccccccccchHHHHH--HHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 042634 371 NAHKQFTRSFSVKECLV--SVLGIGVTCSSELPRERMNMEEVAAQLLSFRNK 420 (427)
Q Consensus 371 ~~~~~~~~~~~~~~~~~--~~~~l~~~cl~~dP~~Rpt~~ev~~~L~~~~~~ 420 (427)
...+..... ++.+++.+||+.+|++|||+.|+++++..+..+
T Consensus 129 --------~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 129 --------RSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred --------cccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence 001122222 689999999999999999999999999887654
No 351
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.96 E-value=1.3e-29 Score=242.60 Aligned_cols=218 Identities=24% Similarity=0.307 Sum_probs=148.7
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecc
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrD 259 (427)
+||||+++++.+.. .+....++||||+. ++|..++... .+++..+..++.|++.||+||| +.||+|||
T Consensus 65 ~h~ni~~~~~~~~~---~~~~~~~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~i~~qi~~~L~~LH---~~~i~H~d 132 (337)
T cd07852 65 DHPNIVKLLNVIKA---ENDKDIYLVFEYME-TDLHAVIRAN-----ILEDVHKRYIMYQLLKALKYIH---SGNVIHRD 132 (337)
T ss_pred CCCCccceeeeecc---CCCceEEEEecccc-cCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCC
Confidence 79999999987543 12345799999995 6888887543 4788899999999999999999 89999999
Q ss_pred ccCCceeeCCCCceEecccccccccCCcC-----------CCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCC
Q 042634 260 LKPSNVLLDGELTAHVGDFGLAKFLPEAT-----------NNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 260 lkp~NIll~~~~~~kL~DFG~a~~~~~~~-----------~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~p 327 (427)
|||+||+++.++.+||+|||.++...... .++..|+|||.+.+ ..++.++|||||||++|||++|+.|
T Consensus 133 l~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~p 212 (337)
T cd07852 133 LKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPL 212 (337)
T ss_pred CCHHHEEEcCCCcEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999998653221 46778999998765 4578999999999999999999999
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccch-hhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGET-SKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN 406 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt 406 (427)
|...... ............. ..+.++............ ......... ......++.++.+++.+||+.||++|||
T Consensus 213 f~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~P~~Rps 288 (337)
T cd07852 213 FPGTSTL-NQLEKIIEVIGPP-SAEDIESIKSPFAATMLDSLPSRPRKPL--DELLPKASDDALDLLKKLLVFNPNKRLT 288 (337)
T ss_pred CCCCChH-HHHHHHHHHhCCC-CHHHHHHHHhhhHHHhhhhcccccccch--hhhccCCCHHHHHHHHHhccCCcccccC
Confidence 9653211 1111111110000 000000000000000000 000000000 0011124677899999999999999999
Q ss_pred HHHHHHH
Q 042634 407 MEEVAAQ 413 (427)
Q Consensus 407 ~~ev~~~ 413 (427)
+.|+++.
T Consensus 289 ~~~il~~ 295 (337)
T cd07852 289 AEEALEH 295 (337)
T ss_pred HHHHhhC
Confidence 9999975
No 352
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.1e-29 Score=224.72 Aligned_cols=181 Identities=23% Similarity=0.268 Sum_probs=147.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+||.+..+--+ |+.+...|.||||+.||.|+-++... +.+++...+.+-.+|+.||.||| +++||.|
T Consensus 225 ~~HPFLt~LKYs-----FQt~drlCFVMeyanGGeLf~HLsre----r~FsE~RtRFYGaEIvsAL~YLH---s~~ivYR 292 (516)
T KOG0690|consen 225 CRHPFLTSLKYS-----FQTQDRLCFVMEYANGGELFFHLSRE----RVFSEDRTRFYGAEIVSALGYLH---SRNIVYR 292 (516)
T ss_pred ccCcHHHHhhhh-----hccCceEEEEEEEccCceEeeehhhh----hcccchhhhhhhHHHHHHhhhhh---hCCeeee
Confidence 468887766544 66688999999999999999999765 45999999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
|+|.+|.|+|.+|++||+|||+++.--. .-+||+.|.|||++....|+.++|+|.+|||||||++|+.||...
T Consensus 293 DlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~- 371 (516)
T KOG0690|consen 293 DLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNK- 371 (516)
T ss_pred echhhhheeccCCceEeeecccchhcccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCccccc-
Confidence 9999999999999999999999985322 128999999999999999999999999999999999999999753
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM 405 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp 405 (427)
+...+.+.+.. .. .. .|.....+...++...+..||.+|-
T Consensus 372 -dh~kLFeLIl~---ed------------------------~k-----FPr~ls~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 372 -DHEKLFELILM---ED------------------------LK-----FPRTLSPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred -chhHHHHHHHh---hh------------------------cc-----CCccCCHHHHHHHHHHhhcChHhhc
Confidence 22222222111 00 00 2223345578899999999999994
No 353
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.96 E-value=1.5e-29 Score=241.64 Aligned_cols=222 Identities=19% Similarity=0.198 Sum_probs=149.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+||||+++++.+... .......++++||+ +++|.+++... ..+++..++.++.|++.||+||| ..||+||
T Consensus 59 ~~h~~iv~~~~~~~~~-~~~~~~~~~~~e~~-~~~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH---~~givH~ 129 (332)
T cd07857 59 RGHKNITCLYDMDIVF-PGNFNELYLYEELM-EADLHQIIRSG----QPLTDAHFQSFIYQILCGLKYIH---SANVLHR 129 (332)
T ss_pred cCCCChheeeeeeeec-cccCCcEEEEEecc-cCCHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---hCCcccC
Confidence 3699999998864331 12234568889988 57898888654 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc----------CCCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA----------TNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~----------~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~p 327 (427)
||||+||+++.++.+||+|||.++..... ..++..|+|||+..+ ..++.++||||+||++|++++|+.|
T Consensus 130 dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~p 209 (332)
T cd07857 130 DLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPV 209 (332)
T ss_pred CCCHHHeEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcC
Confidence 99999999999999999999999864321 157788999998765 5689999999999999999999999
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhh-hccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSK-ANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN 406 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt 406 (427)
|...... ..+...+.. ......+................. ......+.. ....++..+.+++.+|++.||++|||
T Consensus 210 f~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~P~~R~t 285 (332)
T cd07857 210 FKGKDYV-DQLNQILQV-LGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFES--IFPNANPLALDLLEKLLAFDPTKRIS 285 (332)
T ss_pred CCCCCHH-HHHHHHHHH-hCCCCHHHHHhhhhhhHHHHHHhccccCCcchHh--hCCCCCHHHHHHHHHHccCCcccCCC
Confidence 8753211 111111111 000000000000000000000000 000000000 01113467899999999999999999
Q ss_pred HHHHHHH
Q 042634 407 MEEVAAQ 413 (427)
Q Consensus 407 ~~ev~~~ 413 (427)
++|+++.
T Consensus 286 ~~~ll~~ 292 (332)
T cd07857 286 VEEALEH 292 (332)
T ss_pred HHHHhcC
Confidence 9998754
No 354
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.96 E-value=1.8e-29 Score=239.04 Aligned_cols=191 Identities=24% Similarity=0.315 Sum_probs=147.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++.+.+.. ....++||||+ .|++.+++.... ..+++.++..++.|++.|+.||| +.|++||
T Consensus 78 l~h~~iv~~~~~~~~-----~~~~~lv~e~~-~~~l~~~l~~~~---~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~ 145 (313)
T cd06633 78 LKHPNTIEYKGCYLK-----EHTAWLVMEYC-LGSASDLLEVHK---KPLQEVEIAAITHGALQGLAYLH---SHNMIHR 145 (313)
T ss_pred CCCCCCccEEEEEEe-----CCEEEEEEecC-CCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecC
Confidence 579999999988544 45789999999 467777765432 45889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc--CCCccccccccccC---CCCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA--TNNFFNFQIAEYGM---GSEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~--~~~~~~y~aPE~~~---~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
||||+||+++.++.+||+|||.+...... ..++..|+|||++. ...++.++|||||||++|||++|..||.....
T Consensus 146 dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~ 225 (313)
T cd06633 146 DIKAGNILLTEPGQVKLADFGSASKSSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA 225 (313)
T ss_pred CCChhhEEECCCCCEEEeecCCCcccCCCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh
Confidence 99999999999999999999998754332 26778899999974 35688899999999999999999999865311
Q ss_pred CCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 042634 334 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQ 413 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~ 413 (427)
.. ..........+ . ......+..+.+++.+||+.+|++|||+.|++..
T Consensus 226 ~~-~~~~~~~~~~~----~---------------------------~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 226 MS-ALYHIAQNDSP----T---------------------------LQSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred HH-HHHHHHhcCCC----C---------------------------CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 10 00000000000 0 0111233457889999999999999999999864
No 355
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.96 E-value=1.4e-29 Score=233.87 Aligned_cols=192 Identities=19% Similarity=0.235 Sum_probs=149.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+... .....++++||+++++|.+++... ..+++..++.++.|++.||.||| +.|++||
T Consensus 61 l~h~~i~~~~~~~~~~---~~~~~~~v~e~~~~~~L~~~~~~~----~~l~~~~~~~~~~~i~~al~~LH---~~~i~H~ 130 (264)
T cd06653 61 LRHDRIVQYYGCLRDP---EEKKLSIFVEYMPGGSIKDQLKAY----GALTENVTRRYTRQILQGVSYLH---SNMIVHR 130 (264)
T ss_pred cCCCCcceEEEEEEcC---CCCEEEEEEEeCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---hCCEecC
Confidence 4799999999875331 134578999999999999888643 34788899999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC---------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE---------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~---------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~ 329 (427)
||||+||+++.++.+||+|||+++.... ...++..|+|||++.+..++.++|||||||++||+++|+.||.
T Consensus 131 dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 210 (264)
T cd06653 131 DIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWA 210 (264)
T ss_pred CCCHHHEEEcCCCCEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999986432 1246778999999998889999999999999999999999996
Q ss_pred cccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 330 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
... ...... ....... +...+....+++.+++.+||+ +|..|||+.+
T Consensus 211 ~~~----~~~~~~-~~~~~~~---------------------------~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~ 257 (264)
T cd06653 211 EYE----AMAAIF-KIATQPT---------------------------KPMLPDGVSDACRDFLKQIFV-EEKRRPTAEF 257 (264)
T ss_pred ccC----HHHHHH-HHHcCCC---------------------------CCCCCcccCHHHHHHHHHHhc-CcccCccHHH
Confidence 431 111111 1100000 000223345678999999999 5799999998
Q ss_pred HHHH
Q 042634 410 VAAQ 413 (427)
Q Consensus 410 v~~~ 413 (427)
++.+
T Consensus 258 ~~~~ 261 (264)
T cd06653 258 LLRH 261 (264)
T ss_pred HhcC
Confidence 8753
No 356
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.96 E-value=2.3e-29 Score=234.98 Aligned_cols=219 Identities=21% Similarity=0.273 Sum_probs=151.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.... ....++|+||++ ++|.+++.... ..+++..++.++.|++.||+||| ..|++|+
T Consensus 55 l~~~~i~~~~~~~~~~~---~~~~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~~i~~~i~~al~~LH---~~~~~h~ 124 (287)
T cd07840 55 LRHPNIVRLKEIVTSKG---KGSIYMVFEYMD-HDLTGLLDSPE---VKFTESQIKCYMKQLLEGLQYLH---SNGILHR 124 (287)
T ss_pred ccCCCeeeheeeEecCC---CCcEEEEecccc-ccHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHH---HCCceec
Confidence 46999999998865421 257899999996 58888876542 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC-------CCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT-------NNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~-------~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
||||+||++++++.+||+|||.+....... .++..|+|||.+.+ ..++.++||||||+++|||++|+.||..
T Consensus 125 dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~ 204 (287)
T cd07840 125 DIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQG 204 (287)
T ss_pred cCcHHHeEEcCCCCEEEccccceeeccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999999998764432 45677999998765 4578999999999999999999999975
Q ss_pred ccCCCccHHHHHHHhcc---cchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 331 MFTGNLTLHNFVKEALP---ERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
... ...+......... ..+....+..... ............ .......++.++.+++++||+.+|++|||+
T Consensus 205 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~ 278 (287)
T cd07840 205 STE-LEQLEKIFELCGSPTDENWPGVSKLPWFE----NLKPKKPYKRRL-REFFKHLIDPSALDLLDKLLTLDPKKRISA 278 (287)
T ss_pred CCh-HHHHHHHHHHhCCCchhhccccccchhhh----hccccccchhHH-HHHhcccCCHHHHHHHHHHcCCChhhCcCH
Confidence 321 1111111111000 0000000000000 000000000000 000011136778999999999999999999
Q ss_pred HHHHHH
Q 042634 408 EEVAAQ 413 (427)
Q Consensus 408 ~ev~~~ 413 (427)
+|+++.
T Consensus 279 ~~~l~~ 284 (287)
T cd07840 279 DQALQH 284 (287)
T ss_pred HHHhhC
Confidence 999863
No 357
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.96 E-value=1.6e-29 Score=230.99 Aligned_cols=193 Identities=24% Similarity=0.320 Sum_probs=152.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||+++++.+.+.. ....++++||+++++|.+++.... ..+++..+..++.|++.|++||| ..|++||
T Consensus 54 l~~~~i~~~~~~~~~-----~~~~~l~~e~~~~~~L~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lh---~~~i~h~ 122 (253)
T cd05122 54 CKHPNIVKYYGSYLK-----KDELWIVMEFCSGGSLKDLLKSTN---QTLTESQIAYVCKELLKGLEYLH---SNGIIHR 122 (253)
T ss_pred CCCCCEeEEEEEEec-----CCeEEEEEecCCCCcHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHhh---cCCEecC
Confidence 458999999887543 467899999999999999886542 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
||+|+||+++.++.+||+|||.+...... ..++..|+|||.+.+..++.++||||||+++|++++|+.||.....
T Consensus 123 dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~ 202 (253)
T cd05122 123 DIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPP 202 (253)
T ss_pred CCCHHHEEEccCCeEEEeeccccccccccccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCch
Confidence 99999999999999999999999876543 2567789999999888889999999999999999999999875311
Q ss_pred CCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 042634 334 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQ 413 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~ 413 (427)
. ........ ....... .....+.++.+++.+||+.||++|||++|+++.
T Consensus 203 ~--~~~~~~~~---~~~~~~~--------------------------~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 203 M--KALFKIAT---NGPPGLR--------------------------NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred H--HHHHHHHh---cCCCCcC--------------------------cccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0 00000000 0000000 111124568999999999999999999999863
No 358
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.96 E-value=2.2e-29 Score=235.01 Aligned_cols=216 Identities=18% Similarity=0.214 Sum_probs=150.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. ....++||||++ ++|.+++..... ...+++..+..++.|++.||+||| +.|++||
T Consensus 55 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~h~ 124 (284)
T cd07836 55 LKHENIVRLHDVIHT-----ENKLMLVFEYMD-KDLKKYMDTHGV-RGALDPNTVKSFTYQLLKGIAFCH---ENRVLHR 124 (284)
T ss_pred hcCCCEeeeeeeEee-----CCcEEEEEecCC-ccHHHHHHhcCC-CCCcCHHHHHHHHHHHHHHHHHHH---HCCeeeC
Confidence 579999999988544 457899999996 588887754331 135899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||+||++++++.+||+|||.++..... ..++..|++||++.+ ..++.++|||||||++||+++|+.||.+.
T Consensus 125 dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~ 204 (284)
T cd07836 125 DLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGT 204 (284)
T ss_pred CCCHHHEEECCCCcEEEeecchhhhhcCCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999999754322 246778999998866 45689999999999999999999999754
Q ss_pred cCCCccHHHHHHHhcc---cchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 332 FTGNLTLHNFVKEALP---ERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
... ............ ..+..+.+. ....... ............+..+..+.+++.+|++.||.+|||++
T Consensus 205 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~ 276 (284)
T cd07836 205 NNE-DQLLKIFRIMGTPTESTWPGISQL----PEYKPTF---PRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAH 276 (284)
T ss_pred CcH-HHHHHHHHHhCCCChhhHHHHhcC----chhcccc---cCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHH
Confidence 221 111111111100 000000000 0000000 00000000001123467789999999999999999999
Q ss_pred HHHH
Q 042634 409 EVAA 412 (427)
Q Consensus 409 ev~~ 412 (427)
|+++
T Consensus 277 ~~l~ 280 (284)
T cd07836 277 DALQ 280 (284)
T ss_pred HHhc
Confidence 9975
No 359
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.96 E-value=2.8e-29 Score=265.37 Aligned_cols=204 Identities=17% Similarity=0.239 Sum_probs=145.8
Q ss_pred CceeeccCCccccc-ccchhhhccccccC--CCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHH
Q 042634 168 IENLDLSRNNFIRH-RNLVKIITSCASVD--FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASAL 244 (427)
Q Consensus 168 L~~L~L~~N~ll~H-pniv~~~~~~~~~~--~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L 244 (427)
+...+....+-..| +||.++++.+..-. .......+.++||+ +++|.+++.... ..+++.+++.++.||++||
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al 93 (793)
T PLN00181 18 VSEFCTDGSKSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD---RSVDAFECFHVFRQIVEIV 93 (793)
T ss_pred ccccCCCccchhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc---ccccHHHHHHHHHHHHHHH
Confidence 34445555556677 68888888752211 11123467778987 779999997542 4589999999999999999
Q ss_pred HHHhhcCCCCeeeccccCCceeeCC-------------------CCceEecccccccccCC-------------------
Q 042634 245 DYLHHYCETPIVHCDLKPSNVLLDG-------------------ELTAHVGDFGLAKFLPE------------------- 286 (427)
Q Consensus 245 ~~LH~~~~~~ivHrDlkp~NIll~~-------------------~~~~kL~DFG~a~~~~~------------------- 286 (427)
+||| ++||+||||||+|||++. ++.+|++|||+++....
T Consensus 94 ~~lH---~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~ 170 (793)
T PLN00181 94 NAAH---SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPM 170 (793)
T ss_pred HHHH---hCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcc
Confidence 9999 899999999999999943 45678888888764211
Q ss_pred ---cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhcccchhcccCcccccccc
Q 042634 287 ---ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVERE 363 (427)
Q Consensus 287 ---~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (427)
...+|+.|+|||++.+..++.++|||||||++|||++|..|+.... ..+........++.
T Consensus 171 ~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~---~~~~~~~~~~~~~~-------------- 233 (793)
T PLN00181 171 KQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS---RTMSSLRHRVLPPQ-------------- 233 (793)
T ss_pred cccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH---HHHHHHHHhhcChh--------------
Confidence 0146778999999999999999999999999999999988865310 00111100000000
Q ss_pred ccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 042634 364 EGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQ 413 (427)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~ 413 (427)
......+..+++.+||+.+|.+||||.|++++
T Consensus 234 ------------------~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 234 ------------------ILLNWPKEASFCLWLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred ------------------hhhcCHHHHHHHHHhCCCChhhCcChHHHhhc
Confidence 00012234678889999999999999999763
No 360
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.96 E-value=2.1e-29 Score=231.22 Aligned_cols=194 Identities=23% Similarity=0.285 Sum_probs=153.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.... ....++++||+++++|.+++.... .+++..+..++.|++.|++||| +.|++|+
T Consensus 56 l~~~~i~~~~~~~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lh---~~~~~h~ 125 (260)
T cd06606 56 LQHPNIVRYYGSERDEE---KNTLNIFLEYVSGGSLSSLLKKFG----KLPEPVIRKYTRQILEGLAYLH---SNGIVHR 125 (260)
T ss_pred cCCCCEeeEEEEEecCC---CCeEEEEEEecCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCcccc
Confidence 45999999988754411 256899999999999999987542 5899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC--------CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT--------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~--------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
||+|+||+++.++.+||+|||.+....... .++..|+|||...+...+.++||||||+++|++++|..||..
T Consensus 126 dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 205 (260)
T cd06606 126 DIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSE 205 (260)
T ss_pred CCCHHHEEEcCCCCEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999999998764432 567789999999888899999999999999999999999976
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
.. ......... ..... ....+...+..+.+++.+|++.+|++|||+.|+
T Consensus 206 ~~----~~~~~~~~~--------~~~~~-------------------~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~l 254 (260)
T cd06606 206 LG----NPMAALYKI--------GSSGE-------------------PPEIPEHLSEEAKDFLRKCLRRDPKKRPTADEL 254 (260)
T ss_pred CC----chHHHHHhc--------cccCC-------------------CcCCCcccCHHHHHHHHHhCcCChhhCCCHHHH
Confidence 43 111111100 00000 000122336778999999999999999999999
Q ss_pred HHH
Q 042634 411 AAQ 413 (427)
Q Consensus 411 ~~~ 413 (427)
+..
T Consensus 255 l~~ 257 (260)
T cd06606 255 LQH 257 (260)
T ss_pred hhC
Confidence 863
No 361
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.96 E-value=6.1e-29 Score=234.16 Aligned_cols=220 Identities=20% Similarity=0.234 Sum_probs=149.3
Q ss_pred cccccchhhhccccccC-----CCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCC
Q 042634 179 IRHRNLVKIITSCASVD-----FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCET 253 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~-----~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~ 253 (427)
++|||++++++.+.... ..++...++|+||+++ ++.+.+.... ..+++..++.++.|++.||+||| +.
T Consensus 63 l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH---~~ 135 (302)
T cd07864 63 LNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLESGL---VHFSEDHIKSFMKQLLEGLNYCH---KK 135 (302)
T ss_pred CCCCCeeeeeheecCcchhhhccccCCcEEEEEcccCc-cHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHH---hC
Confidence 57999999998765422 1223478999999965 6766665432 35899999999999999999999 89
Q ss_pred CeeeccccCCceeeCCCCceEecccccccccCCcC-------CCccccccccccCC-CCcCccccchhHHHHHHHHHhCC
Q 042634 254 PIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT-------NNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGK 325 (427)
Q Consensus 254 ~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~-------~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~ 325 (427)
||+||||||+||++++++.+||+|||.+....... .++..|+|||.+.+ ..++.++|||||||++|||++|+
T Consensus 136 ~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~ 215 (302)
T cd07864 136 NFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKK 215 (302)
T ss_pred CeecCCCCHHHEEECCCCcEEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999998654322 34667999998765 45789999999999999999999
Q ss_pred CCCCcccCCCccHHHHHHHh---cccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCC
Q 042634 326 RPTNEMFTGNLTLHNFVKEA---LPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPR 402 (427)
Q Consensus 326 ~pf~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~ 402 (427)
.||.... ....+....... .+....++.............. ...... ......+.++.+++.+||+.||.
T Consensus 216 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~li~~~l~~~P~ 288 (302)
T cd07864 216 PIFQANQ-ELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQ-----YRRRLR-EEFSFIPTPALDLLDHMLTLDPS 288 (302)
T ss_pred CCCCCCC-hHHHHHHHHHHhCCCChhhcccccccccccccccccc-----cccchh-hhcCCCCHHHHHHHHHHccCChh
Confidence 9997431 111111111110 0111111110000000000000 000000 00112356789999999999999
Q ss_pred CCCCHHHHHH
Q 042634 403 ERMNMEEVAA 412 (427)
Q Consensus 403 ~Rpt~~ev~~ 412 (427)
+|||++|++.
T Consensus 289 ~Rp~~~~il~ 298 (302)
T cd07864 289 KRCTAEEALN 298 (302)
T ss_pred hCCCHHHHhc
Confidence 9999999975
No 362
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.96 E-value=3.1e-29 Score=235.30 Aligned_cols=216 Identities=19% Similarity=0.209 Sum_probs=147.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. +...++||||++ ++|.+++..... ..+++..+..++.||+.||+||| ++|++||
T Consensus 58 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~-~~l~~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~ 126 (294)
T PLN00009 58 MQHGNIVRLQDVVHS-----EKRLYLVFEYLD-LDLKKHMDSSPD--FAKNPRLIKTYLYQILRGIAYCH---SHRVLHR 126 (294)
T ss_pred ccCCCEeeEEEEEec-----CCeEEEEEeccc-ccHHHHHHhCCC--CCcCHHHHHHHHHHHHHHHHHHH---hCCeeCC
Confidence 579999999998543 567899999994 688777654322 33678888999999999999999 8999999
Q ss_pred cccCCceeeCC-CCceEecccccccccCCc------CCCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 259 DLKPSNVLLDG-ELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~-~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
||||+||+++. ++.+||+|||.+...... ..++..|+|||++.+ ..++.++||||+||++|+|++|..||..
T Consensus 127 dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~ 206 (294)
T PLN00009 127 DLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPG 206 (294)
T ss_pred CCCcceEEEECCCCEEEEcccccccccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 99999999985 567999999999764322 245678999998866 4578999999999999999999999975
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccc---cchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRS---FSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
.... ..+.+.... .........+.......... . ...+... ......+.++.+++.+|++.+|++|||+
T Consensus 207 ~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~ 278 (294)
T PLN00009 207 DSEI-DELFKIFRI-LGTPNEETWPGVTSLPDYKS-----A-FPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITA 278 (294)
T ss_pred CCHH-HHHHHHHHH-hCCCChhhccccccchhhhh-----h-cccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCH
Confidence 3211 111111110 00000011000000000000 0 0000000 0012234568899999999999999999
Q ss_pred HHHHHH
Q 042634 408 EEVAAQ 413 (427)
Q Consensus 408 ~ev~~~ 413 (427)
+|+++.
T Consensus 279 ~~~l~~ 284 (294)
T PLN00009 279 RAALEH 284 (294)
T ss_pred HHHhcC
Confidence 999863
No 363
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.96 E-value=2e-29 Score=222.03 Aligned_cols=145 Identities=22% Similarity=0.364 Sum_probs=123.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh-hhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE-ALKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
++|||+|.+..++.. .+...++++||+ .-||...++-.+. ..+.++...++.++.||+.|+.||| ++=|+|
T Consensus 84 l~h~nvi~Lv~Vfl~----~d~~v~l~fdYA-EhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH---~NWvlH 155 (438)
T KOG0666|consen 84 LKHPNVISLVKVFLS----HDKKVWLLFDYA-EHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLH---SNWVLH 155 (438)
T ss_pred hcCCcchhHHHHHhc----cCceEEEEehhh-hhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHh---hhheee
Confidence 679999999888644 246789999999 4588888764332 1256889999999999999999999 888999
Q ss_pred ccccCCceeeCCC----CceEecccccccccCCcC---------CCccccccccccCCCC-cCccccchhHHHHHHHHHh
Q 042634 258 CDLKPSNVLLDGE----LTAHVGDFGLAKFLPEAT---------NNFFNFQIAEYGMGSE-VSTSGDVYSFGILLLETFT 323 (427)
Q Consensus 258 rDlkp~NIll~~~----~~~kL~DFG~a~~~~~~~---------~~~~~y~aPE~~~~~~-~~~~~DiwS~G~vl~ell~ 323 (427)
||+||.|||+..+ |.|||+|||+|+...... +-|..|+|||.+.+.. |+++.||||.|||+.||++
T Consensus 156 RDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLt 235 (438)
T KOG0666|consen 156 RDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLT 235 (438)
T ss_pred ccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHc
Confidence 9999999999877 899999999999764432 5678999999998854 8999999999999999999
Q ss_pred CCCCCCcc
Q 042634 324 GKRPTNEM 331 (427)
Q Consensus 324 g~~pf~~~ 331 (427)
-++.|.+.
T Consensus 236 l~PlF~g~ 243 (438)
T KOG0666|consen 236 LEPLFKGR 243 (438)
T ss_pred cCccccch
Confidence 99998764
No 364
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.96 E-value=2.7e-29 Score=230.15 Aligned_cols=189 Identities=23% Similarity=0.315 Sum_probs=151.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++.+.+.. ....+++|||+++++|.+++... ..+++..+..++.|++.|+.||| +.||+||
T Consensus 56 l~~~~i~~~~~~~~~-----~~~~~~v~e~~~~~~L~~~~~~~----~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~ 123 (254)
T cd06627 56 LKHPNIVKYIGSIET-----SDSLYIILEYAENGSLRQIIKKF----GPFPESLVAVYVYQVLQGLAYLH---EQGVIHR 123 (254)
T ss_pred CCCCCccEEEEEEEe-----CCEEEEEEecCCCCcHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHh---hCCcccC
Confidence 468999998887543 46789999999999999988654 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC------CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||.+....... .++..|+|||...+..++.++||||+|+++|++++|..||....
T Consensus 124 dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~ 203 (254)
T cd06627 124 DIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLN 203 (254)
T ss_pred CCCHHHEEECCCCCEEEeccccceecCCCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCcc
Confidence 999999999999999999999998764432 56778999999888788999999999999999999999986532
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
. ........ .... ...+...+..+.+++.+||..+|++|||+.|++.
T Consensus 204 ~----~~~~~~~~-~~~~----------------------------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 204 P----MAALFRIV-QDDH----------------------------PPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred H----HHHHHHHh-ccCC----------------------------CCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 1 11110100 0000 0011223567889999999999999999999875
No 365
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=3.6e-29 Score=214.36 Aligned_cols=222 Identities=19% Similarity=0.288 Sum_probs=154.9
Q ss_pred ccccccchhhhccccccCCCC---CCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCC
Q 042634 178 FIRHRNLVKIITSCASVDFQG---NDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETP 254 (427)
Q Consensus 178 ll~Hpniv~~~~~~~~~~~~~---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ 254 (427)
++.|+|++.+++.|....-.. ....++||.+| .-||..++.+.. .+++..++.+++.++..||.|+| +..
T Consensus 72 ~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~c-ehDLaGlLsn~~---vr~sls~Ikk~Mk~Lm~GL~~iH---r~k 144 (376)
T KOG0669|consen 72 LLKHENVVNLIEICRTKATPTNRDRATFYLVFDFC-EHDLAGLLSNRK---VRFSLSEIKKVMKGLMNGLYYIH---RNK 144 (376)
T ss_pred HhcchhHHHHHHHHhhccCCcccccceeeeeHHHh-hhhHHHHhcCcc---ccccHHHHHHHHHHHHHHHHHHH---Hhh
Confidence 367999999999886643222 23478999999 558888887654 45899999999999999999999 899
Q ss_pred eeeccccCCceeeCCCCceEecccccccccCCcC----------CCccccccccccCC-CCcCccccchhHHHHHHHHHh
Q 042634 255 IVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT----------NNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFT 323 (427)
Q Consensus 255 ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~----------~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~ 323 (427)
|+|||+||+|+||+.++.+||+|||+|+...... +-|..|++||.+.+ ..|+++.|||+.|||+.||.+
T Consensus 145 ilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwt 224 (376)
T KOG0669|consen 145 ILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWT 224 (376)
T ss_pred HHhhcccHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHc
Confidence 9999999999999999999999999998654322 34778999999887 568999999999999999999
Q ss_pred CCCCCCcccCCCc--cHHHHHHHhcccchhcccCccccccc-----cccchhh-hccccccccccchHHHHHHHHHHHhh
Q 042634 324 GKRPTNEMFTGNL--TLHNFVKEALPERLAEIVDPVLLVER-----EEGETSK-ANAHKQFTRSFSVKECLVSVLGIGVT 395 (427)
Q Consensus 324 g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~ 395 (427)
|.+.+++...... .+........++-+..+..--+.... .++.... ....+++. -.++..+++..
T Consensus 225 rspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~-------kd~~a~dLle~ 297 (376)
T KOG0669|consen 225 RSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYV-------KDDEALDLLEK 297 (376)
T ss_pred cCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhccccc-------CChhHHHHHHH
Confidence 9999876322110 01111111111111111110000000 0000000 00000111 13467899999
Q ss_pred cCCCCCCCCCCHHHHHHH
Q 042634 396 CSSELPRERMNMEEVAAQ 413 (427)
Q Consensus 396 cl~~dP~~Rpt~~ev~~~ 413 (427)
++..||.+|+++++++.+
T Consensus 298 ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 298 LLKLDPTKRIDADQALNH 315 (376)
T ss_pred HhccCcccCcchHhhhch
Confidence 999999999999998854
No 366
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.96 E-value=3.1e-29 Score=240.50 Aligned_cols=221 Identities=18% Similarity=0.226 Sum_probs=150.8
Q ss_pred cccccchhhhccccccCC-CCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 179 IRHRNLVKIITSCASVDF-QGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
++|||++++.+.+..... ......++|+||+ +++|.+++.. ..+++..+..++.|++.||+||| +.||+|
T Consensus 71 l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~ql~~aL~~LH---~~gi~H 141 (343)
T cd07851 71 MDHENVIGLLDVFTPASSLEDFQDVYLVTHLM-GADLNNIVKC-----QKLSDDHIQFLVYQILRGLKYIH---SAGIIH 141 (343)
T ss_pred ccCCCHHHHHHHhhccccccccccEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeec
Confidence 579999999887544222 2233479999998 7799888764 34899999999999999999999 899999
Q ss_pred ccccCCceeeCCCCceEecccccccccCCcC---CCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEAT---NNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~DFG~a~~~~~~~---~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
|||||+||+++.++.+||+|||.+....... .++..|+|||.+.+ ..++.++||||+||++||+++|+.||.....
T Consensus 142 ~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~ 221 (343)
T cd07851 142 RDLKPSNIAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDH 221 (343)
T ss_pred CCCCHHHeEECCCCCEEEccccccccccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh
Confidence 9999999999999999999999998764432 56778999999865 3678999999999999999999999975321
Q ss_pred CCccHHHHHHHhcccchhcccCccccccccccchhhhcc--ccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 042634 334 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANA--HKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
...+... .................. ........... ...+.. .....+.++.+++.+||+.||++|||+.||+
T Consensus 222 -~~~~~~i-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell 296 (343)
T cd07851 222 -IDQLKRI-MNLVGTPDEELLQKISSE-SARNYIQSLPQMPKKDFKE--VFSGANPLAIDLLEKMLVLDPDKRITAAEAL 296 (343)
T ss_pred -HHHHHHH-HHhcCCCCHHHHhhccch-hHHHHHHhccccCCCCHHH--HhccCCHHHHHHHHHhCCCChhhCCCHHHHh
Confidence 1111111 111110000111000000 00000000000 000000 0112356789999999999999999999997
Q ss_pred HH
Q 042634 412 AQ 413 (427)
Q Consensus 412 ~~ 413 (427)
+.
T Consensus 297 ~h 298 (343)
T cd07851 297 AH 298 (343)
T ss_pred cC
Confidence 63
No 367
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.96 E-value=4.1e-29 Score=233.99 Aligned_cols=192 Identities=20% Similarity=0.252 Sum_probs=147.1
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecc
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrD 259 (427)
+|+||+++++.+. .+...++||||+++++|.+++... ..+++..+..++.|++.||+||| +.|++|||
T Consensus 63 ~~~~i~~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~al~~lH---~~~i~H~d 130 (290)
T cd05613 63 QSPFLVTLHYAFQ-----TDTKLHLILDYINGGELFTHLSQR----ERFKEQEVQIYSGEIVLALEHLH---KLGIIYRD 130 (290)
T ss_pred cCCChhceeeEee-----cCCeEEEEEecCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccC
Confidence 6899999887743 356788999999999999988654 34888999999999999999999 89999999
Q ss_pred ccCCceeeCCCCceEecccccccccCCc-------CCCccccccccccCCC--CcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 260 LKPSNVLLDGELTAHVGDFGLAKFLPEA-------TNNFFNFQIAEYGMGS--EVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 260 lkp~NIll~~~~~~kL~DFG~a~~~~~~-------~~~~~~y~aPE~~~~~--~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
|||+||+++.++.+||+|||+++..... ..++..|+|||.+... .++.++||||||+++|++++|..||..
T Consensus 131 l~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~ 210 (290)
T cd05613 131 IKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTV 210 (290)
T ss_pred CCHHHeEECCCCCEEEeeCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCc
Confidence 9999999999999999999999865432 1467889999998753 467899999999999999999999863
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC-----
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM----- 405 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp----- 405 (427)
... .............. . ...+..++..+.+++.+||+.||++||
T Consensus 211 ~~~-~~~~~~~~~~~~~~------~-----------------------~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~ 260 (290)
T cd05613 211 DGE-KNSQAEISRRILKS------E-----------------------PPYPQEMSALAKDIIQRLLMKDPKKRLGCGPS 260 (290)
T ss_pred CCc-cccHHHHHHHhhcc------C-----------------------CCCCccCCHHHHHHHHHHhcCCHHHhcCCCCC
Confidence 211 11111111110000 0 001122455688999999999999997
Q ss_pred CHHHHHHH
Q 042634 406 NMEEVAAQ 413 (427)
Q Consensus 406 t~~ev~~~ 413 (427)
++++++..
T Consensus 261 ~~~~l~~~ 268 (290)
T cd05613 261 DADEIKKH 268 (290)
T ss_pred CHHHHHcC
Confidence 67777653
No 368
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.96 E-value=3.4e-29 Score=232.96 Aligned_cols=187 Identities=23% Similarity=0.335 Sum_probs=150.3
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecc
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrD 259 (427)
+||||+++++.+. ++...++||||+++++|.+++... ..+++..+..++.|++.||.||| +.|++|+|
T Consensus 60 ~~~~i~~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~i~~ql~~~l~~Lh---~~~~~H~d 127 (280)
T cd05581 60 GHPGIIKLYYTFQ-----DEENLYFVLEYAPNGELLQYIRKY----GSLDEKCTRFYAAEILLALEYLH---SKGIIHRD 127 (280)
T ss_pred cCCCchhHHHHhc-----CCceEEEEEcCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecC
Confidence 4999999998853 356789999999999999998755 35899999999999999999999 89999999
Q ss_pred ccCCceeeCCCCceEecccccccccCCcC--------------------------CCccccccccccCCCCcCccccchh
Q 042634 260 LKPSNVLLDGELTAHVGDFGLAKFLPEAT--------------------------NNFFNFQIAEYGMGSEVSTSGDVYS 313 (427)
Q Consensus 260 lkp~NIll~~~~~~kL~DFG~a~~~~~~~--------------------------~~~~~y~aPE~~~~~~~~~~~DiwS 313 (427)
|||+||+++.++.++|+|||.+....... .++..|+|||......++.++||||
T Consensus 128 l~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~s 207 (280)
T cd05581 128 LKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWA 207 (280)
T ss_pred CCHHHeEECCCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHH
Confidence 99999999999999999999998654322 3567899999998888999999999
Q ss_pred HHHHHHHHHhCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHH
Q 042634 314 FGILLLETFTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIG 393 (427)
Q Consensus 314 ~G~vl~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 393 (427)
+|+++|++++|+.||.... . . ....... +... ..+...++.+.+++
T Consensus 208 lG~~l~~l~~g~~p~~~~~--~--~-~~~~~~~--------~~~~---------------------~~~~~~~~~~~~li 253 (280)
T cd05581 208 LGCIIYQMLTGKPPFRGSN--E--Y-LTFQKIL--------KLEY---------------------SFPPNFPPDAKDLI 253 (280)
T ss_pred HHHHHHHHHhCCCCCCCcc--H--H-HHHHHHH--------hcCC---------------------CCCCccCHHHHHHH
Confidence 9999999999999997532 0 0 0001100 0000 01122356689999
Q ss_pred hhcCCCCCCCCCCH----HHHHH
Q 042634 394 VTCSSELPRERMNM----EEVAA 412 (427)
Q Consensus 394 ~~cl~~dP~~Rpt~----~ev~~ 412 (427)
.+||+.+|++|||+ +|+++
T Consensus 254 ~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 254 EKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred HHHhcCCHhhCCCcccCHHHHhc
Confidence 99999999999999 77764
No 369
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.6e-29 Score=235.49 Aligned_cols=184 Identities=22% Similarity=0.311 Sum_probs=153.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+.|.||++|.. |.++...|+.||-|-||.+.+.++++ ..|....++.++..+.+|++||| ++|||.|
T Consensus 477 ~~s~fIvrLYrT-----frd~kyvYmLmEaClGGElWTiLrdR----g~Fdd~tarF~~acv~EAfeYLH---~k~iIYR 544 (732)
T KOG0614|consen 477 CRSDFIVRLYRT-----FRDSKYVYMLMEACLGGELWTILRDR----GSFDDYTARFYVACVLEAFEYLH---RKGIIYR 544 (732)
T ss_pred cCchHHHHHHHH-----hccchhhhhhHHhhcCchhhhhhhhc----CCcccchhhhhHHHHHHHHHHHH---hcCceec
Confidence 346888999887 55578899999999999999999887 45999999999999999999999 9999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC-----CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
||||+|.+++.+|.+||.|||+|+.+..+. +||+.|.|||++..+..+.++|.||+|+++||+++|++||.+.
T Consensus 545 DLKPENllLd~~Gy~KLVDFGFAKki~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~-- 622 (732)
T KOG0614|consen 545 DLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGV-- 622 (732)
T ss_pred cCChhheeeccCCceEEeehhhHHHhccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCC--
Confidence 999999999999999999999999987665 8999999999999999999999999999999999999999864
Q ss_pred CCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC
Q 042634 334 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN 406 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt 406 (427)
+.+.....+-..+ |.+- .|........++|++....+|.+|--
T Consensus 623 dpmktYn~ILkGi--------d~i~----------------------~Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 623 DPMKTYNLILKGI--------DKIE----------------------FPRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred chHHHHHHHHhhh--------hhhh----------------------cccccchhHHHHHHHHHhcCcHhhhc
Confidence 2222222221111 1110 23445566788999999999999864
No 370
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.96 E-value=4.2e-29 Score=238.00 Aligned_cols=219 Identities=19% Similarity=0.237 Sum_probs=149.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++.+.+.. .....++++||+ +++|.+++... .+++..+..++.|+++||+||| ..||+||
T Consensus 66 l~hpniv~~~~~~~~----~~~~~~lv~e~~-~~~L~~~~~~~-----~~~~~~~~~~~~ql~~aL~~LH---~~~iiH~ 132 (328)
T cd07856 66 LRHENIISLSDIFIS----PLEDIYFVTELL-GTDLHRLLTSR-----PLEKQFIQYFLYQILRGLKYVH---SAGVVHR 132 (328)
T ss_pred cCCCCeeeEeeeEec----CCCcEEEEeehh-ccCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH---hCCcccC
Confidence 579999999887532 234678999998 67888877543 3788888999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC---CCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCcccCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT---NNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEMFTG 334 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~---~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~ 334 (427)
||||+||+++.++.+||+|||.+....... .++..|+|||.+.+ ..++.++|||||||++||+++|+.||.....
T Consensus 133 dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~- 211 (328)
T cd07856 133 DLKPSNILINENCDLKICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDH- 211 (328)
T ss_pred CCCHHHEeECCCCCEEeCccccccccCCCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCH-
Confidence 999999999999999999999998654332 56778999998766 5689999999999999999999999965321
Q ss_pred CccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 042634 335 NLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQ 413 (427)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~ 413 (427)
......+.........+..++.......+.. ...............+.++.++.+++.+||+.+|++|||++|++..
T Consensus 212 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 212 -VNQFSIITDLLGTPPDDVINTICSENTLRFV-QSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred -HHHHHHHHHHhCCCCHHHHHhccchhhHHHH-hhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0011111111110001111100000000000 0000000000000011245678999999999999999999999865
No 371
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.96 E-value=4.8e-29 Score=239.07 Aligned_cols=222 Identities=19% Similarity=0.240 Sum_probs=149.9
Q ss_pred cccccchhhhccccccCC-CCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 179 IRHRNLVKIITSCASVDF-QGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
++||||+++++.+..... ......++|+||+. .++..+.. ..+++..+..++.|++.||+||| ..||+|
T Consensus 71 l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H 140 (342)
T cd07879 71 MQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQ-TDLQKIMG------HPLSEDKVQYLVYQMLCGLKYIH---SAGIIH 140 (342)
T ss_pred cCCCCccchhheecccccCCCCceEEEEecccc-cCHHHHHc------CCCCHHHHHHHHHHHHHHHHHHH---HCCccc
Confidence 579999999988654221 12234689999984 46665542 24888999999999999999999 899999
Q ss_pred ccccCCceeeCCCCceEecccccccccCCcC---CCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEAT---NNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~DFG~a~~~~~~~---~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
|||||+||+++.++.+||+|||+++...... .++..|+|||.+.+ ..++.++|||||||++|||++|+.||.+...
T Consensus 141 ~dlkp~NIll~~~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~ 220 (342)
T cd07879 141 RDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY 220 (342)
T ss_pred CCCCHHHEEECCCCCEEEeeCCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 9999999999999999999999998754432 55778999999876 4688999999999999999999999975311
Q ss_pred CCccHHHHHHHh-cc-cchhcccCccccccccccchhhhcccccccc---ccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 334 GNLTLHNFVKEA-LP-ERLAEIVDPVLLVEREEGETSKANAHKQFTR---SFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 334 ~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
...+....... .+ +...+........ .... ......+ .......+.++.+++.+||+.||++|||++
T Consensus 221 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~ 292 (342)
T cd07879 221 -LDQLTQILKVTGVPGPEFVQKLEDKAAK-----SYIK--SLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTAT 292 (342)
T ss_pred -HHHHHHHHHhcCCCCHHHHHHhcccchH-----HHHh--hcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHH
Confidence 11111111100 00 0010100000000 0000 0000000 000012345688999999999999999999
Q ss_pred HHHHH--HHHHH
Q 042634 409 EVAAQ--LLSFR 418 (427)
Q Consensus 409 ev~~~--L~~~~ 418 (427)
|++.+ ++.++
T Consensus 293 e~l~h~~f~~~~ 304 (342)
T cd07879 293 EALEHPYFDSFR 304 (342)
T ss_pred HHhcCcchhhcc
Confidence 99965 55554
No 372
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.96 E-value=5.8e-29 Score=237.90 Aligned_cols=212 Identities=20% Similarity=0.224 Sum_probs=149.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+.. +...++||||+. |+|.+++... ..+++..+..++.|++.||+||| +.||+||
T Consensus 77 l~h~~iv~~~~~~~~-----~~~~~lv~e~~~-~~l~~~l~~~----~~~~~~~~~~~~~ql~~aL~~LH---~~~i~H~ 143 (335)
T PTZ00024 77 IKHENIMGLVDVYVE-----GDFINLVMDIMA-SDLKKVVDRK----IRLTESQVKCILLQILNGLNVLH---KWYFMHR 143 (335)
T ss_pred CCCcceeeeeEEEec-----CCcEEEEEeccc-cCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecc
Confidence 469999999988543 567899999995 7898888643 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC--------------------cCCCccccccccccCCC-CcCccccchhHHHH
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE--------------------ATNNFFNFQIAEYGMGS-EVSTSGDVYSFGIL 317 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~--------------------~~~~~~~y~aPE~~~~~-~~~~~~DiwS~G~v 317 (427)
||||+||+++.++.+||+|||.++.... ...++..|+|||.+.+. .++.++||||+||+
T Consensus 144 dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~ 223 (335)
T PTZ00024 144 DLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCI 223 (335)
T ss_pred cccHHHeEECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHH
Confidence 9999999999999999999999976541 11346679999998764 46899999999999
Q ss_pred HHHHHhCCCCCCcccCCCccHHHHHHHhccc---chhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHh
Q 042634 318 LLETFTGKRPTNEMFTGNLTLHNFVKEALPE---RLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGV 394 (427)
Q Consensus 318 l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 394 (427)
+|||++|..||...... ..+.........+ .+....+....... . .............++.++.+++.
T Consensus 224 l~el~tg~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~~~~~~~~~~~~li~ 294 (335)
T PTZ00024 224 FAELLTGKPLFPGENEI-DQLGRIFELLGTPNEDNWPQAKKLPLYTEF--T------PRKPKDLKTIFPNASDDAIDLLQ 294 (335)
T ss_pred HHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCchhhCcchhhccccccc--C------cCCcccHHHhCcCCChHHHHHHH
Confidence 99999999999754211 1111111110000 00000000000000 0 00000000011223567889999
Q ss_pred hcCCCCCCCCCCHHHHHH
Q 042634 395 TCSSELPRERMNMEEVAA 412 (427)
Q Consensus 395 ~cl~~dP~~Rpt~~ev~~ 412 (427)
+||+.+|++|||++|++.
T Consensus 295 ~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 295 SLLKLNPLERISAKEALK 312 (335)
T ss_pred HHcCCCchhccCHHHHhc
Confidence 999999999999999986
No 373
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.96 E-value=1.3e-30 Score=224.84 Aligned_cols=198 Identities=24% Similarity=0.251 Sum_probs=148.8
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCccccccc-chhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHP-NREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
..||||++||.+.. ....|+.||.| .-|+..+... .......+++.-.-.|....+.||.||-+ ...|+||
T Consensus 121 ~cp~IVkfyGa~F~-----EGdcWiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHR 192 (361)
T KOG1006|consen 121 NCPNIVKFYGALFS-----EGDCWICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKE--ELKIIHR 192 (361)
T ss_pred CCcHHHHHhhhhhc-----CCceeeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHH--Hhhhhhc
Confidence 46999999999643 45679999999 6677655432 12223568888888899999999999986 7899999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCC--CCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMG--SEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~--~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
|+||+|||++..|.+||||||.+..+... .+|...|||||.+.. ..|+.++||||+|+++||+.||+.||...
T Consensus 193 DvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w 272 (361)
T KOG1006|consen 193 DVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKW 272 (361)
T ss_pred cCChhheEEecCCCEeeecccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchH
Confidence 99999999999999999999999876543 378889999999864 35899999999999999999999999764
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
..--..+.+.+....| .+.. .....+...++..++..|+-.|-.+||...++.
T Consensus 273 ~svfeql~~Vv~gdpp----~l~~-----------------------~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk 325 (361)
T KOG1006|consen 273 DSVFEQLCQVVIGDPP----ILLF-----------------------DKECVHYSFSMVRFINTCLIKDRSDRPKYDDLK 325 (361)
T ss_pred HHHHHHHHHHHcCCCC----eecC-----------------------cccccccCHHHHHHHHHHhhcccccCcchhhhh
Confidence 2211111111111111 1110 001122456689999999999999999999876
Q ss_pred H
Q 042634 412 A 412 (427)
Q Consensus 412 ~ 412 (427)
+
T Consensus 326 ~ 326 (361)
T KOG1006|consen 326 K 326 (361)
T ss_pred c
Confidence 5
No 374
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.96 E-value=6.9e-29 Score=227.04 Aligned_cols=185 Identities=26% Similarity=0.305 Sum_probs=148.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||++++++.+ ..+...+++|||+++++|.+++... ..+++..+..++.|++.|+.|+| ..+++|+
T Consensus 50 l~h~~i~~~~~~~-----~~~~~~~~v~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~~l~~lh---~~~~~H~ 117 (250)
T cd05123 50 INHPFIVKLHYAF-----QTEEKLYLVLEYAPGGELFSHLSKE----GRFSEERARFYAAEIVLALEYLH---SLGIIYR 117 (250)
T ss_pred cCCCcHHHHHHHe-----ecCCeeEEEEecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCceec
Confidence 4599999999874 3367789999999999999998654 34889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||+|+||+++.++.++|+|||.+...... ..++..|+|||...+...+.++|+||||+++||+++|..||....
T Consensus 118 ~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~ 197 (250)
T cd05123 118 DLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAED 197 (250)
T ss_pred CCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence 99999999999999999999999875442 256778999999988888999999999999999999999996531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
. .+........ .. ..+...+.++.+++.+||..||++|||+.+
T Consensus 198 ~-----~~~~~~~~~~--------~~---------------------~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 198 R-----KEIYEKILKD--------PL---------------------RFPEFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred H-----HHHHHHHhcC--------CC---------------------CCCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 1 1111111100 00 011122566889999999999999999943
No 375
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.95 E-value=5.5e-29 Score=238.69 Aligned_cols=221 Identities=20% Similarity=0.253 Sum_probs=145.3
Q ss_pred cccccchhhhccccccC---------CCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhh
Q 042634 179 IRHRNLVKIITSCASVD---------FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHH 249 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~---------~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~ 249 (427)
++|||++++++.+.... +......++||||++ ++|.+++.. ..+++..++.++.||+.||+|||
T Consensus 59 l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH- 131 (342)
T cd07854 59 LDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYME-TDLANVLEQ-----GPLSEEHARLFMYQLLRGLKYIH- 131 (342)
T ss_pred cCCCcchhhHhhhcccccccccccccccccceEEEEeeccc-ccHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH-
Confidence 57999999987754321 111235689999995 688877753 24889999999999999999999
Q ss_pred cCCCCeeeccccCCceeeCC-CCceEecccccccccCCc---------CCCccccccccccCC-CCcCccccchhHHHHH
Q 042634 250 YCETPIVHCDLKPSNVLLDG-ELTAHVGDFGLAKFLPEA---------TNNFFNFQIAEYGMG-SEVSTSGDVYSFGILL 318 (427)
Q Consensus 250 ~~~~~ivHrDlkp~NIll~~-~~~~kL~DFG~a~~~~~~---------~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl 318 (427)
..||+||||||+||+++. +..+||+|||.++..... ..++..|+|||.+.. ..++.++|||||||++
T Consensus 132 --~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil 209 (342)
T cd07854 132 --SANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIF 209 (342)
T ss_pred --hCCcccCCCCHHHEEEcCCCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHH
Confidence 899999999999999974 567899999999764321 246778999998654 5678999999999999
Q ss_pred HHHHhCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCC
Q 042634 319 LETFTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSS 398 (427)
Q Consensus 319 ~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~ 398 (427)
|||++|+.||...... ....... ...+....+......................... ......+.++.+++.+||+
T Consensus 210 ~el~~g~~pf~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~ 285 (342)
T cd07854 210 AEMLTGKPLFAGAHEL-EQMQLIL-ESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLR--DLLPGVNPEALDFLEQILT 285 (342)
T ss_pred HHHHhCCCCCCCCCHH-HHHHHHH-HhcCCCChHHhhhhhhhhhhhhhhcccccCCCHH--HHccCCCHHHHHHHHHHhC
Confidence 9999999999753211 1111111 1111000000000000000000000000000000 0011245678899999999
Q ss_pred CCCCCCCCHHHHHH
Q 042634 399 ELPRERMNMEEVAA 412 (427)
Q Consensus 399 ~dP~~Rpt~~ev~~ 412 (427)
.||++|||++|++.
T Consensus 286 ~dP~~R~t~~ell~ 299 (342)
T cd07854 286 FNPMDRLTAEEALM 299 (342)
T ss_pred CCchhccCHHHHhC
Confidence 99999999999985
No 376
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.95 E-value=1.7e-28 Score=228.65 Aligned_cols=214 Identities=22% Similarity=0.244 Sum_probs=150.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|+|++++.+.+.. ....++|+||++ ++|.+++.... ..+++..+..++.|++.||+||| ..||+||
T Consensus 55 ~~~~~i~~~~~~~~~-----~~~~~~v~e~~~-~~l~~~i~~~~---~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~ 122 (282)
T cd07829 55 LKHPNIVKLLDVIHT-----ERKLYLVFEYCD-MDLKKYLDKRP---GPLSPNLIKSIMYQLLRGLAYCH---SHRILHR 122 (282)
T ss_pred cCCCCHHHHHhhhhc-----CCceEEEecCcC-cCHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHH---HCCcccC
Confidence 359999999998544 467899999996 68999987542 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC------CCccccccccccCCC-CcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT------NNFFNFQIAEYGMGS-EVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~------~~~~~y~aPE~~~~~-~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||+|+||+++.++.+||+|||.++...... .++..|+|||.+.+. .++.++|||||||++||+++|+.||...
T Consensus 123 ~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~ 202 (282)
T cd07829 123 DLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGD 202 (282)
T ss_pred CCChheEEEcCCCCEEEecCCcccccCCCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCc
Confidence 999999999999999999999998654322 345679999998776 7899999999999999999999998653
Q ss_pred cCCCccHHHHHHHhc---ccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 332 FTGNLTLHNFVKEAL---PERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
.. ...+........ +..+....+-. .. ........ .... ....+..+..+.+++++||+.||++|||++
T Consensus 203 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~-~~~~--~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~ 274 (282)
T cd07829 203 SE-IDQLFKIFQILGTPTEESWPGVTKLP-DY---KPTFPKFP-PKDL--EKVLPRLDPEGIDLLSKMLQYNPAKRISAK 274 (282)
T ss_pred cH-HHHHHHHHHHhCCCcHHHHHhhcccc-cc---cccccccC-ccch--HHhcccccHHHHHHHHHhhccCcccCCCHH
Confidence 21 111111111000 00000000000 00 00000000 0000 000111256799999999999999999999
Q ss_pred HHHH
Q 042634 409 EVAA 412 (427)
Q Consensus 409 ev~~ 412 (427)
|++.
T Consensus 275 ~~l~ 278 (282)
T cd07829 275 EALK 278 (282)
T ss_pred HHhh
Confidence 9975
No 377
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.95 E-value=1.7e-28 Score=231.92 Aligned_cols=221 Identities=20% Similarity=0.198 Sum_probs=146.5
Q ss_pred cccccchhhhccccccCC---CCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 042634 179 IRHRNLVKIITSCASVDF---QGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~---~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~i 255 (427)
++||||+++++.+..... ......++|+||+. +++...+.... ..+++..+..++.|+++||+||| +.||
T Consensus 64 l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~-~~l~~~~~~~~---~~~~~~~~~~i~~~l~~al~~lH---~~~i 136 (311)
T cd07866 64 LKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMD-HDLSGLLENPS---VKLTESQIKCYMLQLLEGINYLH---ENHI 136 (311)
T ss_pred cCCCCccchhhheecccccccccCceEEEEEecCC-cCHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 579999999887544221 12335689999994 56766665432 45899999999999999999999 8999
Q ss_pred eeccccCCceeeCCCCceEecccccccccCCcC-----------------CCccccccccccCC-CCcCccccchhHHHH
Q 042634 256 VHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT-----------------NNFFNFQIAEYGMG-SEVSTSGDVYSFGIL 317 (427)
Q Consensus 256 vHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~-----------------~~~~~y~aPE~~~~-~~~~~~~DiwS~G~v 317 (427)
+||||||+||++++++.+||+|||+++...... .++..|+|||.+.+ ..++.++|||||||+
T Consensus 137 ~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~i 216 (311)
T cd07866 137 LHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCV 216 (311)
T ss_pred ecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHH
Confidence 999999999999999999999999998653321 23567999998765 457899999999999
Q ss_pred HHHHHhCCCCCCcccCCCccHHHHHHHhcc--cchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhh
Q 042634 318 LLETFTGKRPTNEMFTGNLTLHNFVKEALP--ERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVT 395 (427)
Q Consensus 318 l~ell~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 395 (427)
+|||++|++||.+.... ............ +......+....... ... .......... ........+.+++.+
T Consensus 217 l~el~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~--~~~~~~~~~~~~i~~ 290 (311)
T cd07866 217 FAEMFTRRPILQGKSDI-DQLHLIFKLCGTPTEETWPGWRSLPGCEG-VHS--FTNYPRTLEE--RFGKLGPEGLDLLSK 290 (311)
T ss_pred HHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCChhhchhhhhcccccc-ccc--CCCCCccHHH--HcccCChhHHHHHHH
Confidence 99999999999753211 111111111000 000000000000000 000 0000000000 001123568899999
Q ss_pred cCCCCCCCCCCHHHHHH
Q 042634 396 CSSELPRERMNMEEVAA 412 (427)
Q Consensus 396 cl~~dP~~Rpt~~ev~~ 412 (427)
|++.||++|||+.|++.
T Consensus 291 ~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 291 LLSLDPYKRLTASDALE 307 (311)
T ss_pred HcccCcccCcCHHHHhc
Confidence 99999999999999875
No 378
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.3e-28 Score=224.38 Aligned_cols=179 Identities=24% Similarity=0.248 Sum_probs=143.3
Q ss_pred cccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccc
Q 042634 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDL 260 (427)
Q Consensus 181 Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDl 260 (427)
-|.++++... |+..+..|.||||+.||+|...+++. ..+.++.+..++.+||-||-||| ++||+.|||
T Consensus 409 ppFL~qlHSc-----FQTmDRLyFVMEyvnGGDLMyhiQQ~----GkFKEp~AvFYAaEiaigLFFLh---~kgIiYRDL 476 (683)
T KOG0696|consen 409 PPFLVQLHSC-----FQTMDRLYFVMEYVNGGDLMYHIQQV----GKFKEPVAVFYAAEIAIGLFFLH---SKGIIYRDL 476 (683)
T ss_pred CchHHHHHHH-----hhhhhheeeEEEEecCchhhhHHHHh----cccCCchhhhhhHHHHHHhhhhh---cCCeeeeec
Confidence 4556666555 45567899999999999999998876 44888999999999999999999 999999999
Q ss_pred cCCceeeCCCCceEecccccccccCC------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCC
Q 042634 261 KPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTG 334 (427)
Q Consensus 261 kp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~ 334 (427)
|.+|||+|.+|++||+|||+++.-.- .-.||+.|+|||++.-++|+.++|+|||||++|||+.|.+||++..
T Consensus 477 KLDNvmLd~eGHiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeD-- 554 (683)
T KOG0696|consen 477 KLDNVMLDSEGHIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED-- 554 (683)
T ss_pred cccceEeccCCceEeeecccccccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCC--
Confidence 99999999999999999999985322 1289999999999999999999999999999999999999998752
Q ss_pred CccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC
Q 042634 335 NLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM 405 (427)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp 405 (427)
+..+.+.+.+..- .-+...+.+.+++....+...|.+|-
T Consensus 555 E~elF~aI~ehnv--------------------------------syPKslSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 555 EDELFQAIMEHNV--------------------------------SYPKSLSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred HHHHHHHHHHccC--------------------------------cCcccccHHHHHHHHHHhhcCCcccc
Confidence 2222222222100 02333455677788888888888874
No 379
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.95 E-value=1e-28 Score=243.87 Aligned_cols=199 Identities=21% Similarity=0.215 Sum_probs=163.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
..|||++.+++++...+...++..|+|||||.+||..++++... ..++.|..+..|++.++.|+.||| ...++||
T Consensus 73 ~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~--g~rl~E~~IaYI~re~lrgl~HLH---~nkviHR 147 (953)
T KOG0587|consen 73 SHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTK--GNRLKEEWIAYILREILRGLAHLH---NNKVIHR 147 (953)
T ss_pred cCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhc--ccchhhHHHHHHHHHHHHHHHHHh---hcceeee
Confidence 57999999999988877777889999999999999999987655 367999999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC------CCccccccccccCCC-----CcCccccchhHHHHHHHHHhCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT------NNFFNFQIAEYGMGS-----EVSTSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~------~~~~~y~aPE~~~~~-----~~~~~~DiwS~G~vl~ell~g~~p 327 (427)
|||-.|||++.++.+||+|||++..+.... .||+.|||||++... .|+.++|+||+|++..||.-|.+|
T Consensus 148 DikG~NiLLT~e~~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PP 227 (953)
T KOG0587|consen 148 DIKGQNVLLTENAEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPP 227 (953)
T ss_pred cccCceEEEeccCcEEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCC
Confidence 999999999999999999999998775433 899999999998653 368899999999999999999999
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
+.++-... +-..++..- ......+..-.++|.+++..|+..|-++||++
T Consensus 228 l~DmHPmr------aLF~IpRNP-------------------------PPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~ 276 (953)
T KOG0587|consen 228 LCDMHPMR------ALFLIPRNP-------------------------PPKLKRPKKWSKKFNDFISTCLVKDYEQRPST 276 (953)
T ss_pred ccCcchhh------hhccCCCCC-------------------------CccccchhhHHHHHHHHHHHHHhhccccCcch
Confidence 87641100 000011000 00111244456789999999999999999999
Q ss_pred HHHHHH
Q 042634 408 EEVAAQ 413 (427)
Q Consensus 408 ~ev~~~ 413 (427)
.+++++
T Consensus 277 ~~ll~h 282 (953)
T KOG0587|consen 277 EELLKH 282 (953)
T ss_pred hhhccC
Confidence 998763
No 380
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.95 E-value=2.8e-29 Score=222.04 Aligned_cols=221 Identities=18% Similarity=0.194 Sum_probs=153.5
Q ss_pred cccccchhhhccccccCC-CCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 179 IRHRNLVKIITSCASVDF-QGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
+.|+|+++++..+.-... ......|+|||+| ..+|...+.- .++...+.+++.|++.|++||| +.||+|
T Consensus 72 v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m-~~nl~~vi~~------elDH~tis~i~yq~~~~ik~lh---s~~Iih 141 (369)
T KOG0665|consen 72 VNHKNIISLLNVFTPQKTLEEFQEVYLVMELM-DANLCQVILM------ELDHETISYILYQMLCGIKHLH---SAGIIH 141 (369)
T ss_pred hcccceeeeeeccCccccHHHHHhHHHHHHhh-hhHHHHHHHH------hcchHHHHHHHHHHHHHHHHHH---hcceee
Confidence 679999999988644221 1224568999999 7788888762 2778899999999999999999 999999
Q ss_pred ccccCCceeeCCCCceEecccccccccCCcC-----CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
|||||+||++..+..+||.|||+|+.-.... ..+..|+|||++.+..+...+||||.||++.||++|...|.+.
T Consensus 142 RdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~- 220 (369)
T KOG0665|consen 142 RDLKPSNIVVNSDCTLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGK- 220 (369)
T ss_pred cccCcccceecchhheeeccchhhcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCc-
Confidence 9999999999999999999999999765552 6677899999999988999999999999999999999988742
Q ss_pred CCCccHHHHHH---Hhc--c----cchhcccCcccc--ccccccchhhhcccccccc-ccchHHHHHHHHHHHhhcCCCC
Q 042634 333 TGNLTLHNFVK---EAL--P----ERLAEIVDPVLL--VEREEGETSKANAHKQFTR-SFSVKECLVSVLGIGVTCSSEL 400 (427)
Q Consensus 333 ~~~~~~~~~~~---~~~--~----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~cl~~d 400 (427)
..+.+|.+ ... . .++.....-... ..+........-....|.. ...++-....+.+++.+|+-.|
T Consensus 221 ---d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~ 297 (369)
T KOG0665|consen 221 ---DHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVID 297 (369)
T ss_pred ---hHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccC
Confidence 22222211 100 0 011111100000 0000000000000111111 1111123345788999999999
Q ss_pred CCCCCCHHHHHHH
Q 042634 401 PRERMNMEEVAAQ 413 (427)
Q Consensus 401 P~~Rpt~~ev~~~ 413 (427)
|++|.|+++++++
T Consensus 298 pe~Risv~daL~H 310 (369)
T KOG0665|consen 298 PEKRISVDDALRH 310 (369)
T ss_pred hhhcccHHHHhcC
Confidence 9999999999863
No 381
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.95 E-value=1.2e-28 Score=236.31 Aligned_cols=220 Identities=17% Similarity=0.177 Sum_probs=149.9
Q ss_pred cccccchhhhccccccC-CCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 179 IRHRNLVKIITSCASVD-FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~-~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
++||||+++++.+.... .......++||||+ +++|.+++.. ..+++..++.++.|++.||+||| +.||+|
T Consensus 71 l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~-----~~l~~~~~~~i~~qi~~al~~LH---~~gi~H 141 (343)
T cd07880 71 MKHENVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMKH-----EKLSEDRIQFLVYQMLKGLKYIH---AAGIIH 141 (343)
T ss_pred cCCCCccceeeeecCCccccccceEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeec
Confidence 56999999988764321 11112458999999 7899888754 34889999999999999999999 899999
Q ss_pred ccccCCceeeCCCCceEecccccccccCCcC---CCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEAT---NNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~DFG~a~~~~~~~---~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
|||||+||+++.++.+||+|||.++...... .++..|+|||.+.+ ..++.++||||+||++|++++|+.||.....
T Consensus 142 ~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 221 (343)
T cd07880 142 RDLKPGNLAVNEDCELKILDFGLARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDH 221 (343)
T ss_pred CCCCHHHEEEcCCCCEEEeecccccccccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 9999999999999999999999998765433 56788999999876 4578999999999999999999999975321
Q ss_pred CCccHHHHHHHhc--ccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 042634 334 GNLTLHNFVKEAL--PERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 334 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
. ..+........ +..+...+...... ....................++.++.+++.+|++.||++|||+.|++
T Consensus 222 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l 296 (343)
T cd07880 222 L-DQLMEIMKVTGTPSKEFVQKLQSEDAK----NYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEAL 296 (343)
T ss_pred H-HHHHHHHHhcCCCCHHHHHhhcchhHH----HHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHh
Confidence 1 11111111100 11111111000000 00000000000000001123455688999999999999999999998
Q ss_pred H
Q 042634 412 A 412 (427)
Q Consensus 412 ~ 412 (427)
.
T Consensus 297 ~ 297 (343)
T cd07880 297 A 297 (343)
T ss_pred c
Confidence 4
No 382
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.95 E-value=2.1e-28 Score=234.89 Aligned_cols=219 Identities=16% Similarity=0.207 Sum_probs=149.9
Q ss_pred cccccchhhhccccccC-CCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 179 IRHRNLVKIITSCASVD-FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~-~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
++||||+++.+.+.... +......+++++++ +++|.+++.. ..+++..+..++.|+++||+||| +.||+|
T Consensus 73 l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH 143 (345)
T cd07877 73 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIH---SADIIH 143 (345)
T ss_pred cCCCcccceeeeeeecccccccccEEEEehhc-ccCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeee
Confidence 57999999998764321 12234467888887 8899887754 24889999999999999999999 899999
Q ss_pred ccccCCceeeCCCCceEecccccccccCCcC---CCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEAT---NNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~DFG~a~~~~~~~---~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
|||||+||+++.++.+||+|||+++...... .++..|+|||.+.+ ..++.++|||||||++|||++|+.||.....
T Consensus 144 ~dlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~ 223 (345)
T cd07877 144 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 223 (345)
T ss_pred cCCChHHEEEcCCCCEEEecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 9999999999999999999999998764433 56778999999866 5678999999999999999999999964321
Q ss_pred CCccHHHHHHHhc--ccchhcccCccccccccccchhhhcc--ccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 334 GNLTLHNFVKEAL--PERLAEIVDPVLLVEREEGETSKANA--HKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 334 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
...+........ +......+..... ......... ...+.. .....+.++.+++.+|++.||++|||+.|
T Consensus 224 -~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dp~~R~t~~e 296 (345)
T cd07877 224 -IDQLKLILRLVGTPGAELLKKISSESA----RNYIQSLTQMPKMNFAN--VFIGANPLAVDLLEKMLVLDSDKRITAAQ 296 (345)
T ss_pred -HHHHHHHHHHhCCCCHHHHhhcccHhH----HHHHHHhcccCCcchhh--hcCCCCHHHHHHHHHHcCCChhhcCCHHH
Confidence 111111111110 0111000000000 000000000 000000 00113456889999999999999999999
Q ss_pred HHHH
Q 042634 410 VAAQ 413 (427)
Q Consensus 410 v~~~ 413 (427)
++.+
T Consensus 297 ~l~h 300 (345)
T cd07877 297 ALAH 300 (345)
T ss_pred HhcC
Confidence 9865
No 383
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.95 E-value=4.8e-29 Score=207.68 Aligned_cols=167 Identities=23% Similarity=0.278 Sum_probs=133.8
Q ss_pred CCceeeccCCcccccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHH
Q 042634 167 GIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDY 246 (427)
Q Consensus 167 ~L~~L~L~~N~ll~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~ 246 (427)
-|..||++ +.-...|.+|.+|+.... ....++.||.| ..||..+.++--.....+++...-+|+..+.+||.|
T Consensus 91 ~L~dldi~-~r~~~CPf~V~FyGa~~r-----egdvwIcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~ 163 (282)
T KOG0984|consen 91 LLMDLDII-MRTVDCPFTVHFYGALFR-----EGDVWICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEF 163 (282)
T ss_pred HHHhhhhh-ccCCCCCeEEEeehhhhc-----cccEEEeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHH
Confidence 34555554 344678999999997432 45789999999 678877765443334668999999999999999999
Q ss_pred HhhcCCCCeeeccccCCceeeCCCCceEecccccccccCCcC-----CCccccccccccCC----CCcCccccchhHHHH
Q 042634 247 LHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGMG----SEVSTSGDVYSFGIL 317 (427)
Q Consensus 247 LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~~----~~~~~~~DiwS~G~v 317 (427)
||+ ...|+|||+||+|||++.+|++|+||||.+..+.... .|...|||||.+.. ..|+.|+||||+|++
T Consensus 164 L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGIt 241 (282)
T KOG0984|consen 164 LHS--KLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGIT 241 (282)
T ss_pred HHH--HhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhh
Confidence 997 5789999999999999999999999999999886654 67778999998754 368999999999999
Q ss_pred HHHHHhCCCCCCcccCCCccHHHHH
Q 042634 318 LLETFTGKRPTNEMFTGNLTLHNFV 342 (427)
Q Consensus 318 l~ell~g~~pf~~~~~~~~~~~~~~ 342 (427)
+.||.+++.||+.....-..+.+.+
T Consensus 242 miElA~lr~PY~~w~tpF~qLkqvV 266 (282)
T KOG0984|consen 242 MIEMAILRFPYESWGTPFQQLKQVV 266 (282)
T ss_pred hhhhhhccccccccCCHHHHHHHHh
Confidence 9999999999986543333343433
No 384
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.6e-29 Score=218.86 Aligned_cols=229 Identities=17% Similarity=0.194 Sum_probs=155.8
Q ss_pred cccccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCee
Q 042634 177 NFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIV 256 (427)
Q Consensus 177 ~ll~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~iv 256 (427)
++.+|.|+...++...-...+--+..|+++|.| ..||.+.+-.. ..++...++-++.||++||+||| +.+|.
T Consensus 107 cfFkHdNVLSaLDILQPph~dfFqEiYV~TELm-QSDLHKIIVSP----Q~Ls~DHvKVFlYQILRGLKYLH---sA~IL 178 (449)
T KOG0664|consen 107 SSFRHDNVLSLLDILQPANPSFFQELYVLTELM-QSDLHKIIVSP----QALTPDHVKVFVYQILRGLKYLH---TANIL 178 (449)
T ss_pred HhhccccHHHHHHhcCCCCchHHHHHHHHHHHH-HhhhhheeccC----CCCCcchhhhhHHHHHhhhHHHh---hcchh
Confidence 457899999998875443332234578899988 78898888655 45999999999999999999999 99999
Q ss_pred eccccCCceeeCCCCceEecccccccccCCcC-------CCccccccccccCCC-CcCccccchhHHHHHHHHHhCCCCC
Q 042634 257 HCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT-------NNFFNFQIAEYGMGS-EVSTSGDVYSFGILLLETFTGKRPT 328 (427)
Q Consensus 257 HrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~-------~~~~~y~aPE~~~~~-~~~~~~DiwS~G~vl~ell~g~~pf 328 (427)
||||||.|.|++++..+||||||+|+...... .-|..|+|||++++. .|+.++||||.|||+.|++.++..|
T Consensus 179 HRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILF 258 (449)
T KOG0664|consen 179 HRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILF 258 (449)
T ss_pred hccCCCccEEeccCceEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhh
Confidence 99999999999999999999999999865443 456689999999985 5899999999999999999999988
Q ss_pred CcccCCCccHHHHHHHhcc-cchhcccCccccccc-cccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC
Q 042634 329 NEMFTGNLTLHNFVKEALP-ERLAEIVDPVLLVER-EEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN 406 (427)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt 406 (427)
..... ..--+.+.+.+. +....+.-.+..... --+.....+...-......+..-..+...+...++..||++|.+
T Consensus 259 QAq~P--iqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris 336 (449)
T KOG0664|consen 259 QAAGP--IEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRIS 336 (449)
T ss_pred hccCh--HHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCccccc
Confidence 75321 111112222111 111111100000000 00000000000000011122223345677888999999999999
Q ss_pred HHHHHHHHH
Q 042634 407 MEEVAAQLL 415 (427)
Q Consensus 407 ~~ev~~~L~ 415 (427)
.++.+..+-
T Consensus 337 ~~~A~~~~~ 345 (449)
T KOG0664|consen 337 VEEALQHRY 345 (449)
T ss_pred Hhhhccccc
Confidence 999877643
No 385
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.95 E-value=3.7e-29 Score=245.80 Aligned_cols=192 Identities=23% Similarity=0.325 Sum_probs=146.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
-.|||||++++. -++....||+.|.| ..+|.+++...............+..+.|++.||+||| +.+||||
T Consensus 560 D~H~NviRyyc~-----E~d~qF~YIalELC-~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLH---sl~iVHR 630 (903)
T KOG1027|consen 560 DEHPNVIRYYCS-----EQDRQFLYIALELC-ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLH---SLKIVHR 630 (903)
T ss_pred cCCCceEEEEee-----ccCCceEEEEehHh-hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHH---hcccccc
Confidence 469999999976 34467899999999 77999999874111111122456788999999999999 8999999
Q ss_pred cccCCceeeCC-----CCceEecccccccccCCcC---------CCccccccccccCCCCcCccccchhHHHHHHHHHh-
Q 042634 259 DLKPSNVLLDG-----ELTAHVGDFGLAKFLPEAT---------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT- 323 (427)
Q Consensus 259 Dlkp~NIll~~-----~~~~kL~DFG~a~~~~~~~---------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~- 323 (427)
||||.||||+. ..+++|+|||+++.+..+. .||.+|+|||++....-+.++||||+|||+|+.++
T Consensus 631 DLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltg 710 (903)
T KOG1027|consen 631 DLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTG 710 (903)
T ss_pred cCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecC
Confidence 99999999965 3589999999999876543 78999999999999888899999999999999998
Q ss_pred CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCC
Q 042634 324 GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRE 403 (427)
Q Consensus 324 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~ 403 (427)
|.+||.+....+..+ +.+. ..... .....+| +..+|+.+|++.||..
T Consensus 711 G~HpFGd~~~R~~NI-------l~~~-~~L~~-----------------------L~~~~d~--eA~dLI~~ml~~dP~~ 757 (903)
T KOG1027|consen 711 GSHPFGDSLERQANI-------LTGN-YTLVH-----------------------LEPLPDC--EAKDLISRMLNPDPQL 757 (903)
T ss_pred CccCCCchHHhhhhh-------hcCc-cceee-----------------------eccCchH--HHHHHHHHhcCCCccc
Confidence 599997642221111 0000 00000 0011222 6889999999999999
Q ss_pred CCCHHHHHH
Q 042634 404 RMNMEEVAA 412 (427)
Q Consensus 404 Rpt~~ev~~ 412 (427)
||||.+|+.
T Consensus 758 RPsa~~VL~ 766 (903)
T KOG1027|consen 758 RPSATDVLN 766 (903)
T ss_pred CCCHHHHhC
Confidence 999999974
No 386
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=3.5e-28 Score=223.23 Aligned_cols=197 Identities=23% Similarity=0.392 Sum_probs=151.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||.||++|+++.. ++...|-|+|||+|.+|.-|++.. +.+++.+++.|+.||+.||.||... ...|+|-
T Consensus 524 LDHpRIVKlYDyfsl----DtdsFCTVLEYceGNDLDFYLKQh----klmSEKEARSIiMQiVnAL~YLNEi-kpPIIHY 594 (775)
T KOG1151|consen 524 LDHPRIVKLYDYFSL----DTDSFCTVLEYCEGNDLDFYLKQH----KLMSEKEARSIIMQIVNALKYLNEI-KPPIIHY 594 (775)
T ss_pred cCcceeeeeeeeeee----ccccceeeeeecCCCchhHHHHhh----hhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeee
Confidence 789999999998643 246689999999999999999877 4599999999999999999999855 6889999
Q ss_pred cccCCceeeC---CCCceEecccccccccCCcC-------------CCccccccccccCCC----CcCccccchhHHHHH
Q 042634 259 DLKPSNVLLD---GELTAHVGDFGLAKFLPEAT-------------NNFFNFQIAEYGMGS----EVSTSGDVYSFGILL 318 (427)
Q Consensus 259 Dlkp~NIll~---~~~~~kL~DFG~a~~~~~~~-------------~~~~~y~aPE~~~~~----~~~~~~DiwS~G~vl 318 (427)
||||.|||+- .-|.+||.|||+++++.... .||.+|.+||.+.-+ +++.|+||||.|||+
T Consensus 595 DLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIF 674 (775)
T KOG1151|consen 595 DLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIF 674 (775)
T ss_pred ccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhh
Confidence 9999999983 44789999999999875432 789999999998643 478999999999999
Q ss_pred HHHHhCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCC
Q 042634 319 LETFTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSS 398 (427)
Q Consensus 319 ~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~ 398 (427)
|.++.|+.||........ ..... .++... ...|. .-+....+..+++++|++
T Consensus 675 yQClYGrKPFGhnqsQQd----ILqeN------TIlkAt---------------EVqFP---~KPvVsseAkaFIRRCLa 726 (775)
T KOG1151|consen 675 YQCLYGRKPFGHNQSQQD----ILQEN------TILKAT---------------EVQFP---PKPVVSSEAKAFIRRCLA 726 (775)
T ss_pred hhhhccCCCCCCchhHHH----HHhhh------chhcce---------------eccCC---CCCccCHHHHHHHHHHHH
Confidence 999999999975311111 11110 111110 01111 112234457889999999
Q ss_pred CCCCCCCCHHHHHH
Q 042634 399 ELPRERMNMEEVAA 412 (427)
Q Consensus 399 ~dP~~Rpt~~ev~~ 412 (427)
+.-++|...-|+..
T Consensus 727 YRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 727 YRKEDRIDVQQLAC 740 (775)
T ss_pred hhhhhhhhHHHHcc
Confidence 99999988877754
No 387
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.95 E-value=2.2e-28 Score=248.76 Aligned_cols=174 Identities=24% Similarity=0.307 Sum_probs=129.8
Q ss_pred ccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccccCCceeeCCCCceEeccccc
Q 042634 201 SEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGL 280 (427)
Q Consensus 201 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~ 280 (427)
..||-||||+...++++++++... -.....+++++||++||.|+| +.|||||||||.||+++++..|||+|||+
T Consensus 670 ~LYIQMEyCE~~ll~~iI~~N~~~---~~~d~~wrLFreIlEGLaYIH---~~giIHRDLKP~NIFLd~~~~VKIGDFGL 743 (1351)
T KOG1035|consen 670 ILYIQMEYCEKTLLRDIIRRNHFN---SQRDEAWRLFREILEGLAYIH---DQGIIHRDLKPRNIFLDSRNSVKIGDFGL 743 (1351)
T ss_pred EEEEEHhhhhhhHHHHHHHhcccc---hhhHHHHHHHHHHHHHHHHHH---hCceeeccCCcceeEEcCCCCeeeccccc
Confidence 468899999988888888765310 036788999999999999999 89999999999999999999999999999
Q ss_pred ccccC------------------------CcCCCccccccccccCCCC---cCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 281 AKFLP------------------------EATNNFFNFQIAEYGMGSE---VSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 281 a~~~~------------------------~~~~~~~~y~aPE~~~~~~---~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
|+... ...+||..|+|||++.+.. |+.|+|+||+|||++||+. ||...-.
T Consensus 744 At~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsME 820 (1351)
T KOG1035|consen 744 ATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSME 820 (1351)
T ss_pred chhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchHH
Confidence 98621 0127899999999997754 9999999999999999985 4654322
Q ss_pred CCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 334 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
....+...-...+|.. ..+ ..+.++. -..++++|++.||.+||||.|++.
T Consensus 821 Ra~iL~~LR~g~iP~~-~~f---------------------------~~~~~~~-e~slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 821 RASILTNLRKGSIPEP-ADF---------------------------FDPEHPE-EASLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred HHHHHHhcccCCCCCC-ccc---------------------------ccccchH-HHHHHHHHhcCCCccCCCHHHHhh
Confidence 2111111111111111 111 1122222 367999999999999999999985
No 388
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.95 E-value=3e-28 Score=205.92 Aligned_cols=220 Identities=20% Similarity=0.230 Sum_probs=155.5
Q ss_pred ccccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 178 FIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 178 ll~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
+..|||||++++...+.. .....+++||..+.+...+. ..++...++.++.|++.||.|+| +.||+|
T Consensus 89 L~gg~NIi~L~DiV~Dp~---SktpaLiFE~v~n~Dfk~ly-------~tl~d~dIryY~~elLkALdyCH---S~GImH 155 (338)
T KOG0668|consen 89 LRGGPNIIKLLDIVKDPE---SKTPSLIFEYVNNTDFKQLY-------PTLTDYDIRYYIYELLKALDYCH---SMGIMH 155 (338)
T ss_pred ccCCCCeeehhhhhcCcc---ccCchhHhhhhccccHHHHh-------hhhchhhHHHHHHHHHHHHhHHH---hcCccc
Confidence 357999999999865532 45578999999988876665 33777889999999999999999 999999
Q ss_pred ccccCCceeeCCC-CceEecccccccccCCcC-----CCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 258 CDLKPSNVLLDGE-LTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 258 rDlkp~NIll~~~-~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
||+||.|+++|.. ..++|+|+|+|.+...+. ..+..|..||.+.. +.|+..-|+|||||.+..|+..+.||..
T Consensus 156 RDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFh 235 (338)
T KOG0668|consen 156 RDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 235 (338)
T ss_pred ccCCcceeeechhhceeeeeecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccC
Confidence 9999999999864 589999999999886655 56677899999877 5689999999999999999999999865
Q ss_pred ccCCCccHHHHHHHhcccchhcc-------cCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCC
Q 042634 331 MFTGNLTLHNFVKEALPERLAEI-------VDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRE 403 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~ 403 (427)
.....+.+...++-.....+... +|+....--+......| ..|..+....-...++.+++.+.+.+|-++
T Consensus 236 G~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w---~~Fi~~~n~hl~~peaiDlldklLrYDHqe 312 (338)
T KOG0668|consen 236 GHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPW---SRFINSENQHLVSPEAIDLLDKLLRYDHQE 312 (338)
T ss_pred CCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccH---HHhCCccccccCChHHHHHHHHHHhhcccc
Confidence 43433333333322222211111 12111110000000000 011111111112356899999999999999
Q ss_pred CCCHHHHHHH
Q 042634 404 RMNMEEVAAQ 413 (427)
Q Consensus 404 Rpt~~ev~~~ 413 (427)
|+|+.|+.++
T Consensus 313 RlTakEam~H 322 (338)
T KOG0668|consen 313 RLTAKEAMAH 322 (338)
T ss_pred ccchHHHhcC
Confidence 9999998764
No 389
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.95 E-value=1.3e-27 Score=216.88 Aligned_cols=192 Identities=28% Similarity=0.353 Sum_probs=152.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|+|++++.+.+.. ....++++||+++++|.+++.... .+++..+..++.+++.++.||| ..+++|+
T Consensus 44 l~~~~i~~~~~~~~~-----~~~~~l~~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~ 111 (244)
T smart00220 44 LKHPNIVRLYDVFED-----EDKLYLVMEYCDGGDLFDLLKKRG----RLSEDEARFYARQILSALEYLH---SNGIIHR 111 (244)
T ss_pred CCCCcHHHHHhheee-----CCEEEEEEeCCCCCCHHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHH---HcCeecC
Confidence 379999999998644 457899999999999999886543 2788999999999999999999 8899999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
||+|+||+++.++.++|+|||.+...... ..++..|++||......++.++||||+|+++|++++|..||.....
T Consensus 112 ~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~ 191 (244)
T smart00220 112 DLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQ 191 (244)
T ss_pred CcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc
Confidence 99999999999999999999999877553 3677889999999888899999999999999999999999865311
Q ss_pred CCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 334 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
. ....+........ .. ......+.++.+++.+||..+|++|||+.++++
T Consensus 192 ~-~~~~~~~~~~~~~----~~-------------------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 192 L-LELFKKIGKPKPP----FP-------------------------PPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred H-HHHHHHHhccCCC----Cc-------------------------cccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 1 1111111100000 00 000004567899999999999999999999986
No 390
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=2.8e-27 Score=210.41 Aligned_cols=140 Identities=28% Similarity=0.361 Sum_probs=126.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+||.+|.+... |+.....+.|.||++||+|.-++++++ .++++.++.+..+|+.||.||| ++||+.|
T Consensus 308 sn~pflvglhsc-----fqtesrlffvieyv~ggdlmfhmqrqr----klpeeharfys~ei~lal~flh---~rgiiyr 375 (593)
T KOG0695|consen 308 SNNPFLVGLHSC-----FQTESRLFFVIEYVNGGDLMFHMQRQR----KLPEEHARFYSAEICLALNFLH---ERGIIYR 375 (593)
T ss_pred cCCCeEEehhhh-----hcccceEEEEEEEecCcceeeehhhhh----cCcHHHhhhhhHHHHHHHHHHh---hcCeeee
Confidence 468888888776 555778899999999999998887764 4999999999999999999999 9999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
|+|..|+|+|..|++||.|+|.++..-. .-+||+.|.|||++++..|...+|+|++||+++||+.|+.||+-
T Consensus 376 dlkldnvlldaeghikltdygmcke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdi 453 (593)
T KOG0695|consen 376 DLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI 453 (593)
T ss_pred eccccceEEccCCceeecccchhhcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcce
Confidence 9999999999999999999999986422 22899999999999999999999999999999999999999974
No 391
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=6.3e-28 Score=243.69 Aligned_cols=137 Identities=26% Similarity=0.323 Sum_probs=122.1
Q ss_pred ccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecccc
Q 042634 182 RNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLK 261 (427)
Q Consensus 182 pniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlk 261 (427)
+-|+++.-. |+++.+.|+|||||+||||..++.+.. ++++..++.++..|+-||.-+| +-|+||||||
T Consensus 135 ~Wiv~LhyA-----FQD~~~LYlVMdY~pGGDlltLlSk~~----~~pE~~ArFY~aEiVlAldslH---~mgyVHRDiK 202 (1317)
T KOG0612|consen 135 EWIVQLHYA-----FQDERYLYLVMDYMPGGDLLTLLSKFD----RLPEDWARFYTAEIVLALDSLH---SMGYVHRDIK 202 (1317)
T ss_pred HHHHHHHHH-----hcCccceEEEEecccCchHHHHHhhcC----CChHHHHHHHHHHHHHHHHHHH---hccceeccCC
Confidence 456665544 777899999999999999999997763 5999999999999999999999 8999999999
Q ss_pred CCceeeCCCCceEecccccccccCCc-------CCCccccccccccCC-----CCcCccccchhHHHHHHHHHhCCCCCC
Q 042634 262 PSNVLLDGELTAHVGDFGLAKFLPEA-------TNNFFNFQIAEYGMG-----SEVSTSGDVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 262 p~NIll~~~~~~kL~DFG~a~~~~~~-------~~~~~~y~aPE~~~~-----~~~~~~~DiwS~G~vl~ell~g~~pf~ 329 (427)
|+|||+|..|++||+|||.+-.+..+ .+|||-|.+||++.. +.|++.+|+||+||++|||+.|..||.
T Consensus 203 PDNvLld~~GHikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFY 282 (1317)
T KOG0612|consen 203 PDNVLLDKSGHIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFY 282 (1317)
T ss_pred cceeEecccCcEeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcch
Confidence 99999999999999999999876533 289999999999853 568999999999999999999999997
Q ss_pred c
Q 042634 330 E 330 (427)
Q Consensus 330 ~ 330 (427)
.
T Consensus 283 a 283 (1317)
T KOG0612|consen 283 A 283 (1317)
T ss_pred H
Confidence 4
No 392
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.94 E-value=9.9e-28 Score=242.08 Aligned_cols=197 Identities=18% Similarity=0.143 Sum_probs=128.2
Q ss_pred CCCccceeeeeecCCCcccccccchhh----------------hhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecccc
Q 042634 198 GNDSEALVYEFMVNGSLEEWLHPNREA----------------LKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLK 261 (427)
Q Consensus 198 ~~~~~~lv~e~~~~g~L~~~l~~~~~~----------------~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlk 261 (427)
.....++|+||+.+++|.+++...... ........+..++.|++.||+||| +++|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH---~~gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLH---STGIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHH---HCCEEeCcCC
Confidence 355789999999999999888643210 001123456789999999999999 8999999999
Q ss_pred CCceeeCC-CCceEecccccccccCC-------cCCCccccccccccCCC----------------------CcCccccc
Q 042634 262 PSNVLLDG-ELTAHVGDFGLAKFLPE-------ATNNFFNFQIAEYGMGS----------------------EVSTSGDV 311 (427)
Q Consensus 262 p~NIll~~-~~~~kL~DFG~a~~~~~-------~~~~~~~y~aPE~~~~~----------------------~~~~~~Di 311 (427)
|+|||++. ++.+||+|||+|+.... ...+++.|+|||.+... .++.++||
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DV 362 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDI 362 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCccc
Confidence 99999986 57999999999986532 22678899999965322 23456799
Q ss_pred hhHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhcc--cchhcccCccccccccccchhhhccccccccccchHHHHHHH
Q 042634 312 YSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEALP--ERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSV 389 (427)
Q Consensus 312 wS~G~vl~ell~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (427)
|||||++|||+++..+++.. ...+...+..... ..+.....+....+. ...+ ..........
T Consensus 363 wSlGviL~el~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----------~~~~---~~~d~~~~~~ 426 (566)
T PLN03225 363 YSAGLIFLQMAFPNLRSDSN---LIQFNRQLKRNDYDLVAWRKLVEPRASPDL----------RRGF---EVLDLDGGAG 426 (566)
T ss_pred HHHHHHHHHHHhCcCCCchH---HHHHHHHHHhcCCcHHHHHHhhccccchhh----------hhhh---hhccccchHH
Confidence 99999999999977664421 0011111110000 001111110000000 0000 0001122345
Q ss_pred HHHHhhcCCCCCCCCCCHHHHHHH
Q 042634 390 LGIGVTCSSELPRERMNMEEVAAQ 413 (427)
Q Consensus 390 ~~l~~~cl~~dP~~Rpt~~ev~~~ 413 (427)
.+++.+|++.||++|||++|++++
T Consensus 427 ~dLi~~mL~~dP~kR~ta~e~L~H 450 (566)
T PLN03225 427 WELLKSMMRFKGRQRISAKAALAH 450 (566)
T ss_pred HHHHHHHccCCcccCCCHHHHhCC
Confidence 689999999999999999999874
No 393
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.94 E-value=5.5e-28 Score=249.73 Aligned_cols=93 Identities=33% Similarity=0.512 Sum_probs=82.5
Q ss_pred ccccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 178 FIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 178 ll~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
.++||||++++..+.. ....++||||+.+++|.+++... ..+++..++.++.||+.||+||| ..||+|
T Consensus 60 ~l~hp~Iv~~~~~~~~-----~~~~~lVmEy~~g~~L~~li~~~----~~l~~~~~~~i~~qil~aL~yLH---~~gIiH 127 (669)
T cd05610 60 LSKSPFIVHLYYSLQS-----ANNVYLVMEYLIGGDVKSLLHIY----GYFDEEMAVKYISEVALALDYLH---RHGIIH 127 (669)
T ss_pred hcCCCCcCeEEEEEEE-----CCEEEEEEeCCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCEEe
Confidence 3679999999877433 56789999999999999998654 34788999999999999999999 889999
Q ss_pred ccccCCceeeCCCCceEeccccccc
Q 042634 258 CDLKPSNVLLDGELTAHVGDFGLAK 282 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~DFG~a~ 282 (427)
|||||+|||++.++.+||+|||+++
T Consensus 128 rDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 128 RDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred CCccHHHEEEcCCCCEEEEeCCCCc
Confidence 9999999999999999999999875
No 394
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.94 E-value=6.6e-28 Score=196.70 Aligned_cols=211 Identities=19% Similarity=0.260 Sum_probs=152.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|.|||++++..+. +....+|+||| ..+|.++...-. ..++.+.++.++.|+++|+.|+| ++++.||
T Consensus 58 lkhknivrl~dvlhs-----dkkltlvfe~c-dqdlkkyfdsln---g~~d~~~~rsfmlqllrgl~fch---shnvlhr 125 (292)
T KOG0662|consen 58 LKHKNIVRLHDVLHS-----DKKLTLVFEFC-DQDLKKYFDSLN---GDLDPEIVRSFMLQLLRGLGFCH---SHNVLHR 125 (292)
T ss_pred hhhcceeehhhhhcc-----CceeEEeHHHh-hHHHHHHHHhcC---CcCCHHHHHHHHHHHHhhhhhhh---hhhhhhc
Confidence 579999999998544 67889999999 778888876543 45889999999999999999999 9999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC------CCccccccccccCCCC-cCccccchhHHHHHHHHHh-CCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT------NNFFNFQIAEYGMGSE-VSTSGDVYSFGILLLETFT-GKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~------~~~~~y~aPE~~~~~~-~~~~~DiwS~G~vl~ell~-g~~pf~~ 330 (427)
|+||.|.+|+.+|..|++|||+|+..+-.. .-|..|++|.++.+.+ |+...|+||.||++.|+.. |++.|.+
T Consensus 126 dlkpqnllin~ngelkladfglarafgipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg 205 (292)
T KOG0662|consen 126 DLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG 205 (292)
T ss_pred cCCcceEEeccCCcEEecccchhhhcCCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCC
Confidence 999999999999999999999999765433 6678999999998865 7999999999999999987 7777776
Q ss_pred ccCCCccHHHHHHHhcc---cchhcccCccccccccccchhhhccccccccccch----HHHHHHHHHHHhhcCCCCCCC
Q 042634 331 MFTGNLTLHNFVKEALP---ERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSV----KECLVSVLGIGVTCSSELPRE 403 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~cl~~dP~~ 403 (427)
.. .++.+....+.... +++..+.. ..++.. -+.+...... +.....=.+++.+.+.-+|.+
T Consensus 206 ~d-vddqlkrif~~lg~p~ed~wps~t~---lpdyk~--------yp~ypattswsqivp~lns~grdllqkll~cnp~q 273 (292)
T KOG0662|consen 206 ND-VDDQLKRIFRLLGTPTEDQWPSMTK---LPDYKP--------YPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQ 273 (292)
T ss_pred Cc-HHHHHHHHHHHhCCCccccCCcccc---CCCCcc--------cCCccccchHHHHhhhhcchhHHHHHHHhccCccc
Confidence 42 22223332222111 11111110 000000 0001111111 122233467888899999999
Q ss_pred CCCHHHHHHH
Q 042634 404 RMNMEEVAAQ 413 (427)
Q Consensus 404 Rpt~~ev~~~ 413 (427)
|.++++.++.
T Consensus 274 risaeaalqh 283 (292)
T KOG0662|consen 274 RISAEAALQH 283 (292)
T ss_pred ccCHHHHhcC
Confidence 9999998763
No 395
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=2.5e-27 Score=226.02 Aligned_cols=143 Identities=22% Similarity=0.324 Sum_probs=125.6
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecc
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrD 259 (427)
+.+-||++|-+ |++.+..|+||+|++|||+..+|-+. ..|++..++.++.++..|+++.| .-|+||||
T Consensus 687 Dn~WVVrLyyS-----FQDkdnLYFVMdYIPGGDmMSLLIrm----gIFeE~LARFYIAEltcAiesVH---kmGFIHRD 754 (1034)
T KOG0608|consen 687 DNEWVVRLYYS-----FQDKDNLYFVMDYIPGGDMMSLLIRM----GIFEEDLARFYIAELTCAIESVH---KMGFIHRD 754 (1034)
T ss_pred CCcceEEEEEE-----eccCCceEEEEeccCCccHHHHHHHh----ccCHHHHHHHHHHHHHHHHHHHH---hccceecc
Confidence 45678888876 66678899999999999999998765 45889999999999999999999 89999999
Q ss_pred ccCCceeeCCCCceEecccccccccC---------Cc---------------------------------------CCCc
Q 042634 260 LKPSNVLLDGELTAHVGDFGLAKFLP---------EA---------------------------------------TNNF 291 (427)
Q Consensus 260 lkp~NIll~~~~~~kL~DFG~a~~~~---------~~---------------------------------------~~~~ 291 (427)
|||+|||||.+|++||.|||++.-.. ++ .+||
T Consensus 755 iKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt 834 (1034)
T KOG0608|consen 755 IKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGT 834 (1034)
T ss_pred cCccceEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCC
Confidence 99999999999999999999996321 00 0789
Q ss_pred cccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCC
Q 042634 292 FNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTG 334 (427)
Q Consensus 292 ~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~ 334 (427)
..|+|||++....|+..+|+||.|||||||+.|+.||.....+
T Consensus 835 ~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~ 877 (1034)
T KOG0608|consen 835 PNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPG 877 (1034)
T ss_pred CcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCC
Confidence 9999999999999999999999999999999999999765433
No 396
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=4.8e-27 Score=218.33 Aligned_cols=226 Identities=19% Similarity=0.204 Sum_probs=159.1
Q ss_pred cccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccc
Q 042634 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDL 260 (427)
Q Consensus 181 Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDl 260 (427)
-..||++++.+... ..++.+.|+|+|++ |-+|..++..... +.++...++.|++||+.||.|||. +.||+|.||
T Consensus 141 ~~~VV~LlD~Fkhs-GpNG~HVCMVfEvL-GdnLLklI~~s~Y--rGlpl~~VK~I~~qvL~GLdYLH~--ecgIIHTDl 214 (590)
T KOG1290|consen 141 KKCVVQLLDHFKHS-GPNGQHVCMVFEVL-GDNLLKLIKYSNY--RGLPLSCVKEICRQVLTGLDYLHR--ECGIIHTDL 214 (590)
T ss_pred Cceeeeeeccceec-CCCCcEEEEEehhh-hhHHHHHHHHhCC--CCCcHHHHHHHHHHHHHHHHHHHH--hcCccccCC
Confidence 35789999987653 56678999999999 8899999976554 669999999999999999999997 679999999
Q ss_pred cCCceeeC------------------------------------------------------------------------
Q 042634 261 KPSNVLLD------------------------------------------------------------------------ 268 (427)
Q Consensus 261 kp~NIll~------------------------------------------------------------------------ 268 (427)
||+|||+.
T Consensus 215 KPENvLl~~~e~~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~ 294 (590)
T KOG1290|consen 215 KPENVLLCSTEIDPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGI 294 (590)
T ss_pred CcceeeeeccccchhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccc
Confidence 99999982
Q ss_pred ------------------------------------------C-------------------------------------
Q 042634 269 ------------------------------------------G------------------------------------- 269 (427)
Q Consensus 269 ------------------------------------------~------------------------------------- 269 (427)
.
T Consensus 295 ~~~~~~~s~n~~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~ 374 (590)
T KOG1290|consen 295 EEEPNQESYNNEPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTI 374 (590)
T ss_pred cccccccccccccCCCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCcccc
Confidence 0
Q ss_pred ---------------CCceEecccccccccCCc---CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 270 ---------------ELTAHVGDFGLAKFLPEA---TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 270 ---------------~~~~kL~DFG~a~~~~~~---~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
+.++||+|||-|...... ...|..|+|||++.+..|++.+||||++|++|||+||...|+.-
T Consensus 375 ~~n~~v~p~~~~~~~di~vKIaDlGNACW~~khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePh 454 (590)
T KOG1290|consen 375 ASNPLVNPDIPLPECDIRVKIADLGNACWVHKHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPH 454 (590)
T ss_pred ccccccCCCCCCCccceeEEEeeccchhhhhhhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCC
Confidence 013678888888765432 36788999999999999999999999999999999999999754
Q ss_pred cCCC-----ccHHHHHHH--hcccc-------hhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcC
Q 042634 332 FTGN-----LTLHNFVKE--ALPER-------LAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCS 397 (427)
Q Consensus 332 ~~~~-----~~~~~~~~~--~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl 397 (427)
.+.. +.+...+.- .+|.. .++++++.-.-..-.+...+.....--.....+.+...++.+++.-||
T Consensus 455 sG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmL 534 (590)
T KOG1290|consen 455 SGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPML 534 (590)
T ss_pred CCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 3322 222222111 11211 112221110000000000000000001122345677899999999999
Q ss_pred CCCCCCCCCHHHHHH
Q 042634 398 SELPRERMNMEEVAA 412 (427)
Q Consensus 398 ~~dP~~Rpt~~ev~~ 412 (427)
+.+|++||||.+.++
T Consensus 535 ef~PeKR~tA~~cl~ 549 (590)
T KOG1290|consen 535 EFDPEKRPTAAQCLK 549 (590)
T ss_pred hcCccccccHHHHhc
Confidence 999999999999885
No 397
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.94 E-value=3.6e-28 Score=227.38 Aligned_cols=191 Identities=22% Similarity=0.306 Sum_probs=153.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||.||.+.-.| ...+..++|||-+ +||..+++..... .++++...+.++.||+.||+||| -++|||+
T Consensus 620 l~HPGiV~le~M~-----ET~ervFVVMEKl-~GDMLEMILSsEk--gRL~er~TkFlvtQIL~ALr~LH---~knIvHC 688 (888)
T KOG4236|consen 620 LHHPGIVNLECMF-----ETPERVFVVMEKL-HGDMLEMILSSEK--GRLPERITKFLVTQILVALRYLH---FKNIVHC 688 (888)
T ss_pred cCCCCeeEEEEee-----cCCceEEEEehhh-cchHHHHHHHhhc--ccchHHHHHHHHHHHHHHHHHhh---hcceeec
Confidence 6799999887664 4467889999999 7777776654433 67999999999999999999999 8999999
Q ss_pred cccCCceeeCCC---CceEecccccccccCCcC-----CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 259 DLKPSNVLLDGE---LTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~---~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
|+||+|||+.+. -.+||||||+|+++++.. +||+.|.|||+++.+.|+..-|+||.|||+|--++|..||..
T Consensus 689 DLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNE 768 (888)
T KOG4236|consen 689 DLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNE 768 (888)
T ss_pred cCCchheeeccCCCCCceeeccccceeecchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCC
Confidence 999999999654 379999999999987765 899999999999999999999999999999999999999965
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
. .++.+.++..- -..+..++.+.....++++...++..-.+|-|.+..
T Consensus 769 d----EdIndQIQNAa----------------------------FMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~ 816 (888)
T KOG4236|consen 769 D----EDINDQIQNAA----------------------------FMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKS 816 (888)
T ss_pred c----cchhHHhhccc----------------------------cccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhh
Confidence 2 22222222110 001122456667778999999999999999998765
Q ss_pred HH
Q 042634 411 AA 412 (427)
Q Consensus 411 ~~ 412 (427)
+.
T Consensus 817 ls 818 (888)
T KOG4236|consen 817 LS 818 (888)
T ss_pred cc
Confidence 43
No 398
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.93 E-value=8.2e-27 Score=218.05 Aligned_cols=222 Identities=19% Similarity=0.211 Sum_probs=156.6
Q ss_pred ccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecccc
Q 042634 182 RNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLK 261 (427)
Q Consensus 182 pniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlk 261 (427)
-|+++++.. |...++.|+|+|-+ ..+|.+++++.... ..|....+..++.|+.-||.+|- ..||+|.|||
T Consensus 494 ~Hclrl~r~-----F~hknHLClVFE~L-slNLRevLKKyG~n-vGL~ikaVRsYaqQLflALklLK---~c~vlHaDIK 563 (752)
T KOG0670|consen 494 FHCLRLFRH-----FKHKNHLCLVFEPL-SLNLREVLKKYGRN-VGLHIKAVRSYAQQLFLALKLLK---KCGVLHADIK 563 (752)
T ss_pred hHHHHHHHH-----hhhcceeEEEehhh-hchHHHHHHHhCcc-cceeehHHHHHHHHHHHHHHHHH---hcCeeecccC
Confidence 356777766 44478999999987 77999999865432 45888999999999999999999 8999999999
Q ss_pred CCceeeCCC-CceEecccccccccCCcCCCc----cccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCCCc
Q 042634 262 PSNVLLDGE-LTAHVGDFGLAKFLPEATNNF----FNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNL 336 (427)
Q Consensus 262 p~NIll~~~-~~~kL~DFG~a~~~~~~~~~~----~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~~~ 336 (427)
|.|||+++. ..+||||||.|....+....+ ..|+|||++.+-+|++..|+||.||++||++||+..|.+.....+
T Consensus 564 PDNiLVNE~k~iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~M 643 (752)
T KOG0670|consen 564 PDNILVNESKNILKLCDFGSASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQM 643 (752)
T ss_pred ccceEeccCcceeeeccCccccccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHH
Confidence 999999865 579999999999887776443 479999999999999999999999999999999999987644332
Q ss_pred c-HHHHHHHhcccch-------hcccCccccccccccchh----------------hhccccccc--cccchHHHHHHHH
Q 042634 337 T-LHNFVKEALPERL-------AEIVDPVLLVEREEGETS----------------KANAHKQFT--RSFSVKECLVSVL 390 (427)
Q Consensus 337 ~-~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~--~~~~~~~~~~~~~ 390 (427)
. +..-+...+|..+ ...+|..+..-+-+.... ......... -.........++.
T Consensus 644 Lrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~r 723 (752)
T KOG0670|consen 644 LRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLR 723 (752)
T ss_pred HHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHH
Confidence 1 1111222222111 111222111100000000 000000000 0112233567899
Q ss_pred HHHhhcCCCCCCCCCCHHHHHHH
Q 042634 391 GIGVTCSSELPRERMNMEEVAAQ 413 (427)
Q Consensus 391 ~l~~~cl~~dP~~Rpt~~ev~~~ 413 (427)
+|+..|+..||++|.|..|++++
T Consensus 724 dLLdkml~LdP~KRit~nqAL~H 746 (752)
T KOG0670|consen 724 DLLDKMLILDPEKRITVNQALKH 746 (752)
T ss_pred HHHHHHhccChhhcCCHHHHhcC
Confidence 99999999999999999998864
No 399
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=7.5e-26 Score=196.00 Aligned_cols=199 Identities=20% Similarity=0.280 Sum_probs=148.7
Q ss_pred cccccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCee
Q 042634 177 NFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIV 256 (427)
Q Consensus 177 ~ll~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~iv 256 (427)
.+..|.||+..|++. |+..+..+.++||++.|||.+-+... .+-+...+.++.|+++|+.||| ++++|
T Consensus 76 ~Ls~H~hIi~tY~va----Fqt~d~YvF~qE~aP~gdL~snv~~~-----GigE~~~K~v~~ql~SAi~fMH---sknlV 143 (378)
T KOG1345|consen 76 FLSPHQHIIDTYEVA----FQTSDAYVFVQEFAPRGDLRSNVEAA-----GIGEANTKKVFAQLLSAIEFMH---SKNLV 143 (378)
T ss_pred eeccchhhhHHHHHH----hhcCceEEEeeccCccchhhhhcCcc-----cccHHHHHHHHHHHHHHHHHhh---ccchh
Confidence 445799999998874 55566788999999999999988764 3778889999999999999999 99999
Q ss_pred eccccCCceee-C-CCCceEecccccccccCCcC---CCccccccccccCCC-----CcCccccchhHHHHHHHHHhCCC
Q 042634 257 HCDLKPSNVLL-D-GELTAHVGDFGLAKFLPEAT---NNFFNFQIAEYGMGS-----EVSTSGDVYSFGILLLETFTGKR 326 (427)
Q Consensus 257 HrDlkp~NIll-~-~~~~~kL~DFG~a~~~~~~~---~~~~~y~aPE~~~~~-----~~~~~~DiwS~G~vl~ell~g~~ 326 (427)
|||||.+|||| + +..++||||||..+..+... ..+..|.+||..... ...+.+|||.||+++|.+++|..
T Consensus 144 HRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~ 223 (378)
T KOG1345|consen 144 HRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKF 223 (378)
T ss_pred hcccccceEEEecCCccEEEeeecccccccCceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCC
Confidence 99999999999 3 33589999999998754432 445578999986543 24778999999999999999999
Q ss_pred CCCcccCCCccHHHHHHHhcc--cchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCC
Q 042634 327 PTNEMFTGNLTLHNFVKEALP--ERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRER 404 (427)
Q Consensus 327 pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~R 404 (427)
||+.....+..+.++..-.-. ..+.+... ...+.+.++.++-+..+|++|
T Consensus 224 PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~----------------------------~fs~~a~r~Fkk~lt~~~~dr 275 (378)
T KOG1345|consen 224 PWQKASIMDKPYWEWEQWLKRKNPALPKKFN----------------------------PFSEKALRLFKKSLTPRFKDR 275 (378)
T ss_pred cchhhhccCchHHHHHHHhcccCccCchhhc----------------------------ccCHHHHHHHHHhcCCccccc
Confidence 999665555555554432211 11111111 123446778888999999999
Q ss_pred CCHHHHHHHHH
Q 042634 405 MNMEEVAAQLL 415 (427)
Q Consensus 405 pt~~ev~~~L~ 415 (427)
--..++.+...
T Consensus 276 cki~~~kk~rk 286 (378)
T KOG1345|consen 276 CKIWTAKKMRK 286 (378)
T ss_pred chhHHHHHHHH
Confidence 65555555443
No 400
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.91 E-value=1.2e-24 Score=214.63 Aligned_cols=209 Identities=17% Similarity=0.155 Sum_probs=137.7
Q ss_pred cccchhhhccccccCC---CCCCccceeeeeecCCCcccccccchh--------------------hhhccCHHHHHHHH
Q 042634 181 HRNLVKIITSCASVDF---QGNDSEALVYEFMVNGSLEEWLHPNRE--------------------ALKNLNLLQRLSIA 237 (427)
Q Consensus 181 Hpniv~~~~~~~~~~~---~~~~~~~lv~e~~~~g~L~~~l~~~~~--------------------~~~~l~~~~~~~~~ 237 (427)
++++++++++|..... ......++||||+++++|.++++.... ....+++..++.++
T Consensus 236 ~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~ 315 (507)
T PLN03224 236 AASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVM 315 (507)
T ss_pred hhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHH
Confidence 3445666666543211 112457999999999999998864210 01234677889999
Q ss_pred HHHHHHHHHHhhcCCCCeeeccccCCceeeCCCCceEecccccccccCCcC-------CCccccccccccCCCCc-----
Q 042634 238 VDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT-------NNFFNFQIAEYGMGSEV----- 305 (427)
Q Consensus 238 ~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~-------~~~~~y~aPE~~~~~~~----- 305 (427)
.|++.||.|+| ..+|+||||||+||+++.++.+||+|||+++...... .+++.|+|||.+.....
T Consensus 316 ~ql~~aL~~lH---~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~ 392 (507)
T PLN03224 316 RQVLTGLRKLH---RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMPQSCPRAP 392 (507)
T ss_pred HHHHHHHHHHH---HCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCCCCCCccc
Confidence 99999999999 8999999999999999999999999999997653321 34678999998754321
Q ss_pred -----------------CccccchhHHHHHHHHHhCCC-CCCcccCCCccHHHHHHHhcccchhcccCccccccccccch
Q 042634 306 -----------------STSGDVYSFGILLLETFTGKR-PTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGET 367 (427)
Q Consensus 306 -----------------~~~~DiwS~G~vl~ell~g~~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (427)
..+.||||+||++|+|++|.. ||.........+...- .....+.......
T Consensus 393 ~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~--~~~~~~r~~~~~~---------- 460 (507)
T PLN03224 393 APAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYD--NDLNRWRMYKGQK---------- 460 (507)
T ss_pred hhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhcc--chHHHHHhhcccC----------
Confidence 134799999999999999875 6653211100000000 0000000000000
Q ss_pred hhhccccccccccchHHHHHHHHHHHhhcCCCCC---CCCCCHHHHHHH
Q 042634 368 SKANAHKQFTRSFSVKECLVSVLGIGVTCSSELP---RERMNMEEVAAQ 413 (427)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP---~~Rpt~~ev~~~ 413 (427)
..+ ...........+++.+|+..+| .+|+|++|++++
T Consensus 461 ------~~~---~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 461 ------YDF---SLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred ------CCc---ccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 000 0122345678899999999766 689999999864
No 401
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.91 E-value=1.7e-25 Score=211.70 Aligned_cols=139 Identities=23% Similarity=0.341 Sum_probs=125.4
Q ss_pred ccccchhhhccccccCCCCCCccceeeeee-cCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFM-VNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~-~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.|+||+++++. |.+++..|++||-- ++-+|++++.-. ..+++.+++.|++|++.|+++|| +.|||||
T Consensus 627 sH~NIlKlLdf-----FEddd~yyl~te~hg~gIDLFd~IE~k----p~m~E~eAk~IFkQV~agi~hlh---~~~ivhr 694 (772)
T KOG1152|consen 627 SHENILKLLDF-----FEDDDYYYLETEVHGEGIDLFDFIEFK----PRMDEPEAKLIFKQVVAGIKHLH---DQGIVHR 694 (772)
T ss_pred Cccchhhhhhe-----eecCCeeEEEecCCCCCcchhhhhhcc----CccchHHHHHHHHHHHhcccccc---ccCceec
Confidence 49999999998 55688899999965 345999999766 45999999999999999999999 9999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC----CCccccccccccCCCCc-CccccchhHHHHHHHHHhCCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT----NNFFNFQIAEYGMGSEV-STSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~----~~~~~y~aPE~~~~~~~-~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
|||-+|+.++.+|.+||+|||.|.....+. .||..|.|||++.+.+| +..-||||+|+++|.++....||..
T Consensus 695 dikdenvivd~~g~~klidfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 695 DIKDENVIVDSNGFVKLIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred ccccccEEEecCCeEEEeeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 999999999999999999999998877665 89999999999999888 5678999999999999999999864
No 402
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.90 E-value=4.3e-24 Score=196.03 Aligned_cols=220 Identities=20% Similarity=0.257 Sum_probs=152.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
..+.||+++.+. +..++..++|+||+++.+..++.. .++..+++.+++.+..||+|+| ..|||||
T Consensus 92 gG~~ni~~~~~~-----~rnnd~v~ivlp~~~H~~f~~l~~-------~l~~~~i~~Yl~~ll~Al~~~h---~~GIvHR 156 (418)
T KOG1167|consen 92 GGSDNIIKLNGC-----FRNNDQVAIVLPYFEHDRFRDLYR-------SLSLAEIRWYLRNLLKALAHLH---KNGIVHR 156 (418)
T ss_pred ccchhhhcchhh-----hccCCeeEEEecccCccCHHHHHh-------cCCHHHHHHHHHHHHHHhhhhh---ccCcccc
Confidence 457788888887 455788999999999988877763 3678899999999999999999 9999999
Q ss_pred cccCCceeeCC-CCceEeccccccccc-----------------CC---------------------------------c
Q 042634 259 DLKPSNVLLDG-ELTAHVGDFGLAKFL-----------------PE---------------------------------A 287 (427)
Q Consensus 259 Dlkp~NIll~~-~~~~kL~DFG~a~~~-----------------~~---------------------------------~ 287 (427)
||||.|+|.+. .++..|+|||+|... .. .
T Consensus 157 DiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~an 236 (418)
T KOG1167|consen 157 DIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERAN 236 (418)
T ss_pred CCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecc
Confidence 99999999975 468899999999711 00 0
Q ss_pred CCCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhcccchhc---ccCc--ccccc
Q 042634 288 TNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEALPERLAE---IVDP--VLLVE 361 (427)
Q Consensus 288 ~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~ 361 (427)
..||++|+|||++.. +.-+.++||||.|||+..+++++.||.....+...+.+.+.-..+..++. ..+. .+...
T Consensus 237 rAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ks 316 (418)
T KOG1167|consen 237 RAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKS 316 (418)
T ss_pred cCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccc
Confidence 178999999999876 45689999999999999999999999876555554444332221111111 1111 00000
Q ss_pred c-cc-----cchhhh--ccc---cc--cccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 042634 362 R-EE-----GETSKA--NAH---KQ--FTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQ 413 (427)
Q Consensus 362 ~-~~-----~~~~~~--~~~---~~--~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~ 413 (427)
. .. ..+... ..- .. .......+..+..+++++.+|++.||.+|.|++|.+++
T Consensus 317 n~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 317 NIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred cccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 0 00 000000 000 00 01111112234478999999999999999999999864
No 403
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.89 E-value=1.7e-23 Score=227.14 Aligned_cols=176 Identities=44% Similarity=0.626 Sum_probs=110.1
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccC
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNL 81 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~ 81 (427)
|+|++|.+++.+|..++.+++|++|+|++|.+.+.+|..++++++|++|+|++|.+++.+|..++.+++|++|++++|.+
T Consensus 145 L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l 224 (968)
T PLN00113 145 LDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNL 224 (968)
T ss_pred EECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCcc
Confidence 56666666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred cccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCCC
Q 042634 82 TGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSS 161 (427)
Q Consensus 82 ~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~~ 161 (427)
++.+|..+.++.+| +.|++++|.+++.+|..++++++|+.|++++|++++.+|..++++++|+.|++++|.+.+.+|..
T Consensus 225 ~~~~p~~l~~l~~L-~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~ 303 (968)
T PLN00113 225 SGEIPYEIGGLTSL-NHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPEL 303 (968)
T ss_pred CCcCChhHhcCCCC-CEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChh
Confidence 66666666666666 45666666666666666666666666666666666555655555555555555555555555555
Q ss_pred cccccCCceeeccCCcc
Q 042634 162 LSSLRGIENLDLSRNNF 178 (427)
Q Consensus 162 l~~l~~L~~L~L~~N~l 178 (427)
+..+++|+.|++++|.+
T Consensus 304 ~~~l~~L~~L~l~~n~~ 320 (968)
T PLN00113 304 VIQLQNLEILHLFSNNF 320 (968)
T ss_pred HcCCCCCcEEECCCCcc
Confidence 55555555555544433
No 404
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.89 E-value=6.4e-24 Score=213.85 Aligned_cols=196 Identities=18% Similarity=0.196 Sum_probs=150.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
+.|||++..+..+... ....-+||||++ ||+.++... ..++..++-.+++|++.|++|+| ..||.||
T Consensus 378 l~h~~~~e~l~~~~~~-----~~~~~~mE~~~~-Dlf~~~~~~----~~~~~~e~~c~fKqL~~Gv~y~h---~~Giahr 444 (601)
T KOG0590|consen 378 LSHPNIIETLDIVQEI-----DGILQSMEYCPY-DLFSLVMSN----GKLTPLEADCFFKQLLRGVKYLH---SMGLAHR 444 (601)
T ss_pred ccCCchhhhHHHHhhc-----ccchhhhhcccH-HHHHHHhcc----cccchhhhhHHHHHHHHHHHHHH---hcCceec
Confidence 6899998877765442 222333999999 999998764 24888999999999999999999 9999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC----------cCCCccccccccccCCCCcCc-cccchhHHHHHHHHHhCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE----------ATNNFFNFQIAEYGMGSEVST-SGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~----------~~~~~~~y~aPE~~~~~~~~~-~~DiwS~G~vl~ell~g~~p 327 (427)
|+|++|++++.++.+||+|||.+..... +..|+..|.|||++.+.+|++ .+||||.|+++..|++|+.|
T Consensus 445 dlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~ 524 (601)
T KOG0590|consen 445 DLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFP 524 (601)
T ss_pred cCccccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCc
Confidence 9999999999999999999999986432 227888999999999999976 48999999999999999999
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
|......+..+.... .... ..+ ...+.......+.+...+|.+|+++||.+|.|+
T Consensus 525 Wk~a~~~~~~~~~~~---~~~~-~~~---------------------~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti 579 (601)
T KOG0590|consen 525 WKVAKKSDNSFKTNN---YSDQ-RNI---------------------FEGPNRLLSLLPRETRIIIYRMLQLDPTKRITI 579 (601)
T ss_pred cccccccccchhhhc---cccc-ccc---------------------ccChHHHHHhchhhHHHHHHHHccCChhheecH
Confidence 986544433320000 0000 000 001111334556778889999999999999999
Q ss_pred HHHHH
Q 042634 408 EEVAA 412 (427)
Q Consensus 408 ~ev~~ 412 (427)
++|++
T Consensus 580 ~~i~~ 584 (601)
T KOG0590|consen 580 EQILN 584 (601)
T ss_pred HHHhh
Confidence 99986
No 405
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.88 E-value=6.1e-23 Score=181.68 Aligned_cols=159 Identities=29% Similarity=0.456 Sum_probs=137.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
+.|++++++++.+.. ....++++||+++++|.+++.... ..+++..+..++.++++++++|| ..|++|+
T Consensus 48 l~~~~i~~~~~~~~~-----~~~~~~~~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh---~~~~~H~ 116 (215)
T cd00180 48 LNHPNIVKLYGVFED-----ENHLYLVMEYCEGGSLKDLLKENE---GKLSEDEILRILLQILEGLEYLH---SNGIIHR 116 (215)
T ss_pred cCCCCeeeEeeeeec-----CCeEEEEEecCCCCcHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---hCCeecc
Confidence 456899998887543 357899999999899999886542 24888999999999999999999 8899999
Q ss_pred cccCCceeeCC-CCceEecccccccccCCc------CCCccccccccccCCC-CcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 259 DLKPSNVLLDG-ELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGS-EVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~-~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~-~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
||+|.||+++. ++.++|+|||.+...... ..+...|++||..... ..+.++|+|++|++++++
T Consensus 117 dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l--------- 187 (215)
T cd00180 117 DLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL--------- 187 (215)
T ss_pred CCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH---------
Confidence 99999999999 899999999999876543 3567789999998877 788999999999999998
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
.++.+++.+|++.+|++|||++++
T Consensus 188 --------------------------------------------------------~~~~~~l~~~l~~~p~~R~~~~~l 211 (215)
T cd00180 188 --------------------------------------------------------PELKDLIRKMLQKDPEKRPSAKEI 211 (215)
T ss_pred --------------------------------------------------------HHHHHHHHHHhhCCcccCcCHHHH
Confidence 125779999999999999999999
Q ss_pred HHH
Q 042634 411 AAQ 413 (427)
Q Consensus 411 ~~~ 413 (427)
++.
T Consensus 212 ~~~ 214 (215)
T cd00180 212 LEH 214 (215)
T ss_pred hhC
Confidence 875
No 406
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.88 E-value=1.9e-23 Score=201.08 Aligned_cols=193 Identities=20% Similarity=0.260 Sum_probs=147.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
-+|||||.+++.+.. ....+++||||.+|+|++..+.. .++++.++..+.++.++|++||| +.|-+||
T Consensus 69 c~h~nivay~gsylr-----~dklwicMEycgggslQdiy~~T----gplselqiayvcRetl~gl~ylh---s~gk~hR 136 (829)
T KOG0576|consen 69 CRHPNIVAYFGSYLR-----RDKLWICMEYCGGGSLQDIYHVT----GPLSELQIAYVCRETLQGLKYLH---SQGKIHR 136 (829)
T ss_pred CCCcChHHHHhhhhh-----hcCcEEEEEecCCCcccceeeec----ccchhHHHHHHHhhhhccchhhh---cCCcccc
Confidence 469999999998544 56889999999999999987765 45999999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC------cCCCccccccccccC---CCCcCccccchhHHHHHHHHHhCCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGM---GSEVSTSGDVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~---~~~~~~~~DiwS~G~vl~ell~g~~pf~ 329 (427)
|||-.||++++.+.+|++|||.+..+.. ...||+.|||||+.. ...|...+|||+.|++..|+-.-.+|-.
T Consensus 137 diKGanilltd~gDvklaDfgvsaqitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplf 216 (829)
T KOG0576|consen 137 DIKGANILLTDEGDVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLF 216 (829)
T ss_pred cccccceeecccCceeecccCchhhhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCccc
Confidence 9999999999999999999999976532 348999999999864 3568999999999999999987776632
Q ss_pred cccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 330 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
+.-. ......+.+. ..++-...+ ...-.+-|.++++.|+..+|++|||++-
T Consensus 217 dlhp--mr~l~LmTkS-------~~qpp~lkD--------------------k~kws~~fh~fvK~altknpKkRptaek 267 (829)
T KOG0576|consen 217 DLHP--MRALFLMTKS-------GFQPPTLKD--------------------KTKWSEFFHNFVKGALTKNPKKRPTAEK 267 (829)
T ss_pred ccch--HHHHHHhhcc-------CCCCCcccC--------------------CccchHHHHHHHHHHhcCCCccCCChhh
Confidence 2100 0000000110 011100000 0011345788999999999999999997
Q ss_pred HHH
Q 042634 410 VAA 412 (427)
Q Consensus 410 v~~ 412 (427)
++.
T Consensus 268 lL~ 270 (829)
T KOG0576|consen 268 LLQ 270 (829)
T ss_pred hee
Confidence 765
No 407
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.87 E-value=1.6e-22 Score=175.53 Aligned_cols=200 Identities=22% Similarity=0.279 Sum_probs=151.4
Q ss_pred ccccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 178 FIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 178 ll~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
+..||||+.+++.|.. .....++..||+.|+|+..+++... ...+..++.+++.++|+|+.|||+. +.-|.-
T Consensus 243 ifshpnilpvlgacns-----ppnlv~isq~mp~gslynvlhe~t~--vvvd~sqav~faldiargmaflhsl-ep~ipr 314 (448)
T KOG0195|consen 243 IFSHPNILPVLGACNS-----PPNLVIISQYMPFGSLYNVLHEQTS--VVVDHSQAVRFALDIARGMAFLHSL-EPMIPR 314 (448)
T ss_pred eecCCchhhhhhhccC-----CCCceEeeeeccchHHHHHHhcCcc--EEEecchHHHHHHHHHhhHHHHhhc-chhhhh
Confidence 3579999999999876 3567899999999999999987654 5577889999999999999999974 344445
Q ss_pred ccccCCceeeCCCCceEec--ccccccccCCcCCCccccccccccCCCCc---CccccchhHHHHHHHHHhCCCCCCccc
Q 042634 258 CDLKPSNVLLDGELTAHVG--DFGLAKFLPEATNNFFNFQIAEYGMGSEV---STSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~--DFG~a~~~~~~~~~~~~y~aPE~~~~~~~---~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
--+.+..+++|++.+++|+ |--++ +...+..-.+.||+||.+...+- -.++|+|||++++||+.|+..||.+..
T Consensus 315 ~~lns~hvmidedltarismad~kfs-fqe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadls 393 (448)
T KOG0195|consen 315 FYLNSKHVMIDEDLTARISMADTKFS-FQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLS 393 (448)
T ss_pred hhcccceEEecchhhhheecccceee-eeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCC
Confidence 5789999999999888773 32222 12334466788999999987654 357999999999999999999998653
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
.-+..+.-. -+.+. ...++.....+.++|.-|+..||.+||.++.|+-
T Consensus 394 pmecgmkia-leglr-------------------------------v~ippgis~hm~klm~icmnedpgkrpkfdmivp 441 (448)
T KOG0195|consen 394 PMECGMKIA-LEGLR-------------------------------VHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVP 441 (448)
T ss_pred chhhhhhhh-hcccc-------------------------------ccCCCCccHHHHHHHHHHhcCCCCcCCCcceehh
Confidence 322221111 01111 1123334556788999999999999999999999
Q ss_pred HHHHHH
Q 042634 413 QLLSFR 418 (427)
Q Consensus 413 ~L~~~~ 418 (427)
.|+++.
T Consensus 442 ilekm~ 447 (448)
T KOG0195|consen 442 ILEKMI 447 (448)
T ss_pred hHHHhc
Confidence 998864
No 408
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.85 E-value=2.4e-21 Score=186.75 Aligned_cols=205 Identities=26% Similarity=0.393 Sum_probs=156.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
+.|.|+.++++.+.. +...++|.+||..|+|.+.+.... ..+++.....++++|+.||+|+|+ +..-.|+
T Consensus 4 l~h~n~~~f~g~~~~-----~~~~~~i~~~c~rGsl~D~i~~~~---~~~d~~F~~s~~rdi~~Gl~ylh~--s~i~~hg 73 (484)
T KOG1023|consen 4 LDHDNLNKFIGASVD-----GPEMIVIWEYCSRGSLLDILSNED---IKLDYFFILSFIRDISKGLAYLHN--SPIGYHG 73 (484)
T ss_pred cchhhhhhheeeEec-----CCceEEEEeeecCccHHhHHhccc---cCccHHHHHHHHHHHHHHHHHHhc--Ccceeee
Confidence 579999999999755 367889999999999999997743 458889999999999999999994 3333999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc---C-----CCccccccccccCCCC-------cCccccchhHHHHHHHHHh
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA---T-----NNFFNFQIAEYGMGSE-------VSTSGDVYSFGILLLETFT 323 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~---~-----~~~~~y~aPE~~~~~~-------~~~~~DiwS~G~vl~ell~ 323 (427)
.+++.|++++....+||+|||+....... . ....-|.|||.+.+.. .+.+.||||||++++|+++
T Consensus 74 ~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~ 153 (484)
T KOG1023|consen 74 ALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILF 153 (484)
T ss_pred eeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHh
Confidence 99999999999999999999999877431 1 2223589999987742 3677999999999999999
Q ss_pred CCCCCCcccCCCcc--HHHHHHHhcccchhcccCccccccccccchhhhccccccccccc-hHHHHHHHHHHHhhcCCCC
Q 042634 324 GKRPTNEMFTGNLT--LHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFS-VKECLVSVLGIGVTCSSEL 400 (427)
Q Consensus 324 g~~pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~cl~~d 400 (427)
.+.||......... +...+..... ... .+... ..+.+.++..++.+||..+
T Consensus 154 r~~~~~~~~~~~~~~eii~~~~~~~~----~~~----------------------rP~i~~~~e~~~~l~~l~~~cw~e~ 207 (484)
T KOG1023|consen 154 RSGPFDLRNLVEDPDEIILRVKKGGS----NPF----------------------RPSIELLNELPPELLLLVARCWEEI 207 (484)
T ss_pred ccCccccccccCChHHHHHHHHhcCC----CCc----------------------CcchhhhhhcchHHHHHHHHhcccC
Confidence 99999864333221 1111111000 000 11111 1134457899999999999
Q ss_pred CCCCCCHHHHHHHHHHHHH
Q 042634 401 PRERMNMEEVAAQLLSFRN 419 (427)
Q Consensus 401 P~~Rpt~~ev~~~L~~~~~ 419 (427)
|++||++++|...++.+..
T Consensus 208 P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 208 PEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred hhhCccHHHHHhhhhhhcc
Confidence 9999999999999988765
No 409
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.85 E-value=2.7e-21 Score=173.54 Aligned_cols=140 Identities=29% Similarity=0.440 Sum_probs=121.6
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecc
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrD 259 (427)
+|+|++++++.+.. ....++++||+++++|.+++..... .+++..+..++.+++.++.+|| ..+++|+|
T Consensus 55 ~~~~i~~~~~~~~~-----~~~~~~v~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~d 123 (225)
T smart00221 55 KHPNIVKLYGVFED-----PEPLYLVMEYCEGGDLFDYLRKKGG---KLSEEEARFYLRQILEALEYLH---SLGIVHRD 123 (225)
T ss_pred CCCChhhheeeeec-----CCceEEEEeccCCCCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHH---hCCeecCC
Confidence 68999999887543 4578899999999999998865431 1788999999999999999999 88999999
Q ss_pred ccCCceeeCCCCceEecccccccccCCc-------CCCcccccccccc-CCCCcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 260 LKPSNVLLDGELTAHVGDFGLAKFLPEA-------TNNFFNFQIAEYG-MGSEVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 260 lkp~NIll~~~~~~kL~DFG~a~~~~~~-------~~~~~~y~aPE~~-~~~~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
++|+||+++.++.++|+|||.+...... ..++..|++||.. ....++.++||||||++++|+++|+.||..
T Consensus 124 i~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 124 LKPENILLGMDGLVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred CCHHHEEEcCCCCEEEeeCceeeEecCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 9999999999999999999999876543 2566779999998 667788899999999999999999999965
No 410
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.84 E-value=9.3e-23 Score=165.51 Aligned_cols=168 Identities=26% Similarity=0.442 Sum_probs=144.3
Q ss_pred cccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccCcccCCCCccccccc
Q 042634 16 SIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNLTGTTPTEVIGLSSL 95 (427)
Q Consensus 16 ~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~~l~~l 95 (427)
.+.++++++.|.||+|+++ .+|+.+..+.+|+.|+++||+++ ++|..+++++.|+.|+++-|++. .+|.+|+.++.|
T Consensus 28 gLf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~l 104 (264)
T KOG0617|consen 28 GLFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPAL 104 (264)
T ss_pred cccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchh
Confidence 4677888899999999998 78888999999999999999999 99999999999999999999997 889999999998
Q ss_pred cceeeccCCcCc-CCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCCCcccccCCceeecc
Q 042634 96 SIYLDLSQNQLN-GPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLS 174 (427)
Q Consensus 96 ~~~L~l~~n~~~-~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~ 174 (427)
+.|||++|.+. ..+|+.|..++.|+.|+|+.|.+. .+|..++++++|+.|.+..|.+- .+|..++.++.|+.|.+.
T Consensus 105 -evldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiq 181 (264)
T KOG0617|consen 105 -EVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQ 181 (264)
T ss_pred -hhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcc
Confidence 57999998886 478888888999999999999988 78999999999999999988887 478888999999999999
Q ss_pred CCcccccccchhhhc
Q 042634 175 RNNFIRHRNLVKIIT 189 (427)
Q Consensus 175 ~N~ll~Hpniv~~~~ 189 (427)
+|.+.--|--+.-++
T Consensus 182 gnrl~vlppel~~l~ 196 (264)
T KOG0617|consen 182 GNRLTVLPPELANLD 196 (264)
T ss_pred cceeeecChhhhhhh
Confidence 988876665444333
No 411
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.83 E-value=1.9e-20 Score=170.78 Aligned_cols=198 Identities=20% Similarity=0.196 Sum_probs=140.3
Q ss_pred cccccccchhhhccccccC----------------------CCCCCccceeeeeecCCCcccccccchhhhhccCHHHHH
Q 042634 177 NFIRHRNLVKIITSCASVD----------------------FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRL 234 (427)
Q Consensus 177 ~ll~Hpniv~~~~~~~~~~----------------------~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~ 234 (427)
++-+|||||++++.+.+.- ...+...|+||.-. ..+|.+++..+. .+.....
T Consensus 271 hLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY-~~tLr~yl~~~~-----~s~r~~~ 344 (598)
T KOG4158|consen 271 HLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRY-RQTLREYLWTRH-----RSYRTGR 344 (598)
T ss_pred ccCCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcc-hhhHHHHHhcCC-----CchHHHH
Confidence 4578999999988764320 11234567888877 557888776543 5566778
Q ss_pred HHHHHHHHHHHHHhhcCCCCeeeccccCCceee--CCCC--ceEecccccccccCC------------cCCCcccccccc
Q 042634 235 SIAVDVASALDYLHHYCETPIVHCDLKPSNVLL--DGEL--TAHVGDFGLAKFLPE------------ATNNFFNFQIAE 298 (427)
Q Consensus 235 ~~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll--~~~~--~~kL~DFG~a~~~~~------------~~~~~~~y~aPE 298 (427)
-++.|+++|+.||| .+||.|||+|++|||+ |+|+ .+.++|||++-.-.. +..|....||||
T Consensus 345 ~~laQlLEav~hL~---~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPE 421 (598)
T KOG4158|consen 345 VILAQLLEAVTHLH---KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPE 421 (598)
T ss_pred HHHHHHHHHHHHHH---HccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchh
Confidence 89999999999999 9999999999999998 4444 578899999854322 114555689999
Q ss_pred ccCCCCc------CccccchhHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhcc
Q 042634 299 YGMGSEV------STSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANA 372 (427)
Q Consensus 299 ~~~~~~~------~~~~DiwS~G~vl~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (427)
+....+- -.|+|.|+.|.+.||+++...||.....-..+...+-...+|
T Consensus 422 i~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLP------------------------- 476 (598)
T KOG4158|consen 422 IATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLP------------------------- 476 (598)
T ss_pred hhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCC-------------------------
Confidence 9865331 358999999999999999999997621111111111111111
Q ss_pred ccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 042634 373 HKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQLL 415 (427)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~L~ 415 (427)
..++.|+..+.+++...++.||.+|++..=....|.
T Consensus 477 -------alp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 477 -------ALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred -------CCcccCChHHHHHHHHHhcCCccccCCccHHHhHHH
Confidence 134556777889999999999999999876655544
No 412
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.82 E-value=1.8e-22 Score=163.84 Aligned_cols=158 Identities=34% Similarity=0.549 Sum_probs=145.4
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccC
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNL 81 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~ 81 (427)
|.||.|.++ .+|+.+..|.+|+.|++++|+++ .+|..+++++.|+.|+++-|++. .+|..|+.++.|+.||+++|++
T Consensus 38 LtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldltynnl 114 (264)
T KOG0617|consen 38 LTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLTYNNL 114 (264)
T ss_pred hhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhcccccc
Confidence 578999999 78999999999999999999998 89999999999999999999999 9999999999999999999999
Q ss_pred c-ccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCC
Q 042634 82 T-GTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPS 160 (427)
Q Consensus 82 ~-~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~ 160 (427)
. ..+|..|..+..| ..|.|+.|.|. .+|..++++++|+.|.+..|.+. ++|.+++.+..|++|++++|.++- +|.
T Consensus 115 ~e~~lpgnff~m~tl-ralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~v-lpp 190 (264)
T KOG0617|consen 115 NENSLPGNFFYMTTL-RALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLTV-LPP 190 (264)
T ss_pred ccccCCcchhHHHHH-HHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceeee-cCh
Confidence 5 5678889999999 57999999997 89999999999999999999988 799999999999999999999994 666
Q ss_pred Cccccc
Q 042634 161 SLSSLR 166 (427)
Q Consensus 161 ~l~~l~ 166 (427)
.++.+.
T Consensus 191 el~~l~ 196 (264)
T KOG0617|consen 191 ELANLD 196 (264)
T ss_pred hhhhhh
Confidence 665543
No 413
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.80 E-value=9.1e-22 Score=188.30 Aligned_cols=163 Identities=31% Similarity=0.420 Sum_probs=101.1
Q ss_pred CcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccCcccCCCCccccccccceeeccCCcCcCCCCCCCcCC
Q 042634 38 PSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNLTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGIL 117 (427)
Q Consensus 38 p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l 117 (427)
|.++-.|.+|..+|||.|++. .+|..+..+.+|+.|+||+|+++ .+......+.++ ..|+|+.|+++ .+|+.+++|
T Consensus 215 Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~l-EtLNlSrNQLt-~LP~avcKL 290 (1255)
T KOG0444|consen 215 PTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENL-ETLNLSRNQLT-VLPDAVCKL 290 (1255)
T ss_pred CCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhh-hhhccccchhc-cchHHHhhh
Confidence 334444444444444444444 44555555555555555555554 444444444444 34555556655 566677777
Q ss_pred CCCCeEECcCCccc-ccCCccccccccccceeeeeeeccccCCCCcccccCCceeeccCCcccccccchhhhccccccCC
Q 042634 118 KNLGAIDISENKLS-GQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIRHRNLVKIITSCASVDF 196 (427)
Q Consensus 118 ~~L~~l~l~~n~~~-~~~p~~~~~~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~ll~Hpniv~~~~~~~~~~~ 196 (427)
++|+.|++.+|+++ .-||+.||.+..|+.+..++|.+. ..|..+..+..|+.|.|+.|+++.-|.-|.++.....++.
T Consensus 291 ~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLiTLPeaIHlL~~l~vLDl 369 (1255)
T KOG0444|consen 291 TKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLITLPEAIHLLPDLKVLDL 369 (1255)
T ss_pred HHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhcccccceeechhhhhhcCCcceeec
Confidence 77777777776544 126777777777777777777776 5677888888888889999999888888888777666666
Q ss_pred CCCCccceeee
Q 042634 197 QGNDSEALVYE 207 (427)
Q Consensus 197 ~~~~~~~lv~e 207 (427)
..+. -+||+
T Consensus 370 reNp--nLVMP 378 (1255)
T KOG0444|consen 370 RENP--NLVMP 378 (1255)
T ss_pred cCCc--CccCC
Confidence 5543 34554
No 414
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.76 E-value=4.8e-20 Score=176.61 Aligned_cols=176 Identities=32% Similarity=0.472 Sum_probs=97.2
Q ss_pred eecCCcc-cccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcC-ccCCCCCCeEEccCcc
Q 042634 3 TLVGNQF-TGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSS-LGKCQNLILLDLSNNN 80 (427)
Q Consensus 3 ~l~~n~l-~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~-~~~l~~L~~l~l~~N~ 80 (427)
+++.|+| +..+|+++..|..|+.||||+|+++ .+|..+-.-.++-+|+||+|++. ++|.. +.+++-|-.||||+|+
T Consensus 84 ~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~Nr 161 (1255)
T KOG0444|consen 84 IVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNR 161 (1255)
T ss_pred hhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccch
Confidence 3444444 2234555555555555555555555 55555555555555555555555 55543 3445555555555555
Q ss_pred CcccCCCCccccccccceeeccCCcCc-------------------------CCCCCCCcCCCCCCeEECcCCcccccCC
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLN-------------------------GPLPSNFGILKNLGAIDISENKLSGQIP 135 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~-------------------------~~~p~~~~~l~~L~~l~l~~n~~~~~~p 135 (427)
+. .+|.....+.+| ++|+|++|++. .-+|.++..+.+|..+|+|.|.+. .+|
T Consensus 162 Le-~LPPQ~RRL~~L-qtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vP 238 (1255)
T KOG0444|consen 162 LE-MLPPQIRRLSML-QTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVP 238 (1255)
T ss_pred hh-hcCHHHHHHhhh-hhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cch
Confidence 55 344444455555 34555555541 234555555556666666666665 566
Q ss_pred ccccccccccceeeeeeeccccCCCCcccccCCceeeccCCcccccccc
Q 042634 136 SSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIRHRNL 184 (427)
Q Consensus 136 ~~~~~~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~ll~Hpni 184 (427)
+.+-.+.+|+.|+||+|+++ .+....+.+.+++.|++|.|++..-|..
T Consensus 239 ecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt~LP~a 286 (1255)
T KOG0444|consen 239 ECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLTVLPDA 286 (1255)
T ss_pred HHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhccchHH
Confidence 66666666666666666666 3444555556666666666666555543
No 415
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.75 E-value=2.1e-19 Score=171.04 Aligned_cols=201 Identities=22% Similarity=0.254 Sum_probs=137.5
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCc-chhccccCCEeeeccccCcccC-CcCccCCCCCCeEEccCc
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPS-SIGNLTLLITLNFAENMLEGSI-PSSLGKCQNLILLDLSNN 79 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~-~~~~l~~L~~L~l~~n~l~~~~-p~~~~~l~~L~~l~l~~N 79 (427)
|+|++|++|..=-..|..|.+|..|.|++|+++ .+|. .|.+|++|+.|+|..|++. .+ --.|.++++|+.|.|..|
T Consensus 178 L~La~N~It~l~~~~F~~lnsL~tlkLsrNrit-tLp~r~Fk~L~~L~~LdLnrN~ir-ive~ltFqgL~Sl~nlklqrN 255 (873)
T KOG4194|consen 178 LNLASNRITTLETGHFDSLNSLLTLKLSRNRIT-TLPQRSFKRLPKLESLDLNRNRIR-IVEGLTFQGLPSLQNLKLQRN 255 (873)
T ss_pred EeeccccccccccccccccchheeeecccCccc-ccCHHHhhhcchhhhhhcccccee-eehhhhhcCchhhhhhhhhhc
Confidence 566666666443455666666666666666665 4543 4555666666666666665 33 234555666666666666
Q ss_pred cCcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCC
Q 042634 80 NLTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIP 159 (427)
Q Consensus 80 ~~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p 159 (427)
.+...-...|.++.++ ++|+|+.|+++.--.+++.+|++|+.|+||+|.|...-++.+.-+++|++|+|++|.++...+
T Consensus 256 ~I~kL~DG~Fy~l~km-e~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~ 334 (873)
T KOG4194|consen 256 DISKLDDGAFYGLEKM-EHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDE 334 (873)
T ss_pred CcccccCcceeeeccc-ceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCCh
Confidence 6654444456667777 568888888875556788889999999999999887778888889999999999999998888
Q ss_pred CCcccccCCceeeccCCcccc-cccchhhhccccccCCCCCCcccee
Q 042634 160 SSLSSLRGIENLDLSRNNFIR-HRNLVKIITSCASVDFQGNDSEALV 205 (427)
Q Consensus 160 ~~l~~l~~L~~L~L~~N~ll~-Hpniv~~~~~~~~~~~~~~~~~~lv 205 (427)
.+|..|..|+.|.|++|.+.. |.+....+......+...+...+.|
T Consensus 335 ~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~I 381 (873)
T KOG4194|consen 335 GSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCI 381 (873)
T ss_pred hHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEE
Confidence 888888899999998888743 3444444555555555555544443
No 416
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.75 E-value=2.6e-20 Score=169.99 Aligned_cols=233 Identities=29% Similarity=0.493 Sum_probs=149.6
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccC
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNL 81 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~ 81 (427)
|++..|+++ .+|++++.+.+++.|+.|+|+++ .+|+.++++.+|..|++++|.+. ++|++++.+-.|..++..+|++
T Consensus 73 l~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i 149 (565)
T KOG0472|consen 73 LNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLEDLDATNNQI 149 (565)
T ss_pred EEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHHhhhhhhhcccccc
Confidence 456666666 56666666666666666666666 56666666666666666666666 6666666666666666666666
Q ss_pred cccCCCCccccccccceeeccCCcCc----------------------CCCCCCCcCCCCCCeEECcCCcccccCCcccc
Q 042634 82 TGTTPTEVIGLSSLSIYLDLSQNQLN----------------------GPLPSNFGILKNLGAIDISENKLSGQIPSSIG 139 (427)
Q Consensus 82 ~~~~p~~~~~l~~l~~~L~l~~n~~~----------------------~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~ 139 (427)
+ ..|..++.+.++ ..|++.+|++. +.+|..++.+.+|..||+..|++. .+| +|.
T Consensus 150 ~-slp~~~~~~~~l-~~l~~~~n~l~~l~~~~i~m~~L~~ld~~~N~L~tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~ 225 (565)
T KOG0472|consen 150 S-SLPEDMVNLSKL-SKLDLEGNKLKALPENHIAMKRLKHLDCNSNLLETLPPELGGLESLELLYLRRNKIR-FLP-EFP 225 (565)
T ss_pred c-cCchHHHHHHHH-HHhhccccchhhCCHHHHHHHHHHhcccchhhhhcCChhhcchhhhHHHHhhhcccc-cCC-CCC
Confidence 5 455555555555 33555555543 356666666767777777777766 566 667
Q ss_pred ccccccceeeeeeeccccCCCCc-ccccCCceeeccCCcccccccchhhhccccccCCCCCCccceeeeeecCCCc--cc
Q 042634 140 SCIRLEQLVMNGNFFRGNIPSSL-SSLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSL--EE 216 (427)
Q Consensus 140 ~~~~l~~l~l~~n~l~~~~p~~l-~~l~~L~~L~L~~N~ll~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L--~~ 216 (427)
+|..|++++.+.|++.- +|+.+ ..+..+..||+..|++..-|--+.++......|.+++....+.++ -|++ ..
T Consensus 226 gcs~L~Elh~g~N~i~~-lpae~~~~L~~l~vLDLRdNklke~Pde~clLrsL~rLDlSNN~is~Lp~s---LgnlhL~~ 301 (565)
T KOG0472|consen 226 GCSLLKELHVGENQIEM-LPAEHLKHLNSLLVLDLRDNKLKEVPDEICLLRSLERLDLSNNDISSLPYS---LGNLHLKF 301 (565)
T ss_pred ccHHHHHHHhcccHHHh-hHHHHhcccccceeeeccccccccCchHHHHhhhhhhhcccCCccccCCcc---cccceeee
Confidence 77777777777777763 45444 478889999999999999888887777777777777776666554 3454 11
Q ss_pred ccccchhhhhccCHHHHHHHHHHHHHHHHHHhh
Q 042634 217 WLHPNREALKNLNLLQRLSIAVDVASALDYLHH 249 (427)
Q Consensus 217 ~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~ 249 (427)
..-.. .++....+--+-..-++-++|||+
T Consensus 302 L~leG----NPlrTiRr~ii~~gT~~vLKyLrs 330 (565)
T KOG0472|consen 302 LALEG----NPLRTIRREIISKGTQEVLKYLRS 330 (565)
T ss_pred hhhcC----CchHHHHHHHHcccHHHHHHHHHH
Confidence 11111 223222222334455667999993
No 417
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.74 E-value=3e-20 Score=169.57 Aligned_cols=167 Identities=32% Similarity=0.466 Sum_probs=132.8
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccC
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNL 81 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~ 81 (427)
+|..+|+++ ++|++++.+.+|..|++.+|+++ ++|+..-+++.|+.||+.+|-++ ++|++++.+.+|..|++..|++
T Consensus 142 l~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~-~l~~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki 218 (565)
T KOG0472|consen 142 LDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLK-ALPENHIAMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKI 218 (565)
T ss_pred hhccccccc-cCchHHHHHHHHHHhhccccchh-hCCHHHHHHHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhccc
Confidence 355667776 56777777777777777777776 56666656777888888888877 8888888888888888888888
Q ss_pred cccCCCCccccccccceeeccCCcCcCCCCCCCc-CCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCC
Q 042634 82 TGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFG-ILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPS 160 (427)
Q Consensus 82 ~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~-~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~ 160 (427)
. .+| +|.++..| .+|+++.|++. .+|.+.+ .+.++..||+..|++. +.|++++-+.+|..||+|+|.+++ +|.
T Consensus 219 ~-~lP-ef~gcs~L-~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is~-Lp~ 292 (565)
T KOG0472|consen 219 R-FLP-EFPGCSLL-KELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDISS-LPY 292 (565)
T ss_pred c-cCC-CCCccHHH-HHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCcccc-CCc
Confidence 7 666 67888877 67888888886 6776665 7888888999999888 788888888888899999999886 678
Q ss_pred CcccccCCceeeccCCcc
Q 042634 161 SLSSLRGIENLDLSRNNF 178 (427)
Q Consensus 161 ~l~~l~~L~~L~L~~N~l 178 (427)
.++++ .|..|.+.+|.+
T Consensus 293 sLgnl-hL~~L~leGNPl 309 (565)
T KOG0472|consen 293 SLGNL-HLKFLALEGNPL 309 (565)
T ss_pred ccccc-eeeehhhcCCch
Confidence 88888 788888888876
No 418
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.74 E-value=1.5e-18 Score=175.93 Aligned_cols=192 Identities=20% Similarity=0.243 Sum_probs=141.9
Q ss_pred CcccccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 042634 176 NNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255 (427)
Q Consensus 176 N~ll~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~i 255 (427)
+.+.+|||.+.+...... +.-.|+|-+|. .-+|++.+..++- +...+.+.|+.|++.|+.-+| ..||
T Consensus 75 ~~l~~~pn~lPfqk~~~t-----~kAAylvRqyv-khnLyDRlSTRPF----L~~iEKkWiaFQLL~al~qcH---~~gV 141 (1431)
T KOG1240|consen 75 FALMKAPNCLPFQKVLVT-----DKAAYLVRQYV-KHNLYDRLSTRPF----LVLIEKKWIAFQLLKALSQCH---KLGV 141 (1431)
T ss_pred HHhhcCCcccchHHHHHh-----hHHHHHHHHHH-hhhhhhhhccchH----HHHHHHHHHHHHHHHHHHHHH---HcCc
Confidence 556789999888766322 55678999998 6689999987743 778899999999999999999 9999
Q ss_pred eeccccCCceeeCCCCceEeccccccccc--CCcC-----------CCccccccccccCCCC-----------cCccccc
Q 042634 256 VHCDLKPSNVLLDGELTAHVGDFGLAKFL--PEAT-----------NNFFNFQIAEYGMGSE-----------VSTSGDV 311 (427)
Q Consensus 256 vHrDlkp~NIll~~~~~~kL~DFG~a~~~--~~~~-----------~~~~~y~aPE~~~~~~-----------~~~~~Di 311 (427)
.|+|||.+||||++-.-+.|+||..-+.. +++. ..-..|.|||.+.... .+++.||
T Consensus 142 cHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDI 221 (1431)
T KOG1240|consen 142 CHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDI 221 (1431)
T ss_pred cccccccceEEEeeechhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhh
Confidence 99999999999999999999999876643 2222 1123699999875421 4789999
Q ss_pred hhHHHHHHHHHh-CCCCCCcccCCCccHHHHHHH--hcccchhcccCccccccccccchhhhccccccccccchHHHHHH
Q 042634 312 YSFGILLLETFT-GKRPTNEMFTGNLTLHNFVKE--ALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVS 388 (427)
Q Consensus 312 wS~G~vl~ell~-g~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (427)
||+|||+.|+++ |++||.-. .+..+... ..++.+.+.+ ....
T Consensus 222 FS~GCViaELf~Eg~PlF~LS-----QL~aYr~~~~~~~e~~Le~I------------------------------ed~~ 266 (1431)
T KOG1240|consen 222 FSAGCVIAELFLEGRPLFTLS-----QLLAYRSGNADDPEQLLEKI------------------------------EDVS 266 (1431)
T ss_pred hhhhHHHHHHHhcCCCcccHH-----HHHhHhccCccCHHHHHHhC------------------------------cCcc
Confidence 999999999988 89998632 00000000 0001111101 1124
Q ss_pred HHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 042634 389 VLGIGVTCSSELPRERMNMEEVAAQLL 415 (427)
Q Consensus 389 ~~~l~~~cl~~dP~~Rpt~~ev~~~L~ 415 (427)
+..++..|++.||.+|-++++.++.-+
T Consensus 267 ~Rnlil~Mi~rdPs~RlSAedyL~~yr 293 (1431)
T KOG1240|consen 267 LRNLILSMIQRDPSKRLSAEDYLQKYR 293 (1431)
T ss_pred HHHHHHHHHccCchhccCHHHHHHhhh
Confidence 677999999999999999999998743
No 419
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.74 E-value=1.1e-18 Score=168.68 Aligned_cols=137 Identities=29% Similarity=0.337 Sum_probs=120.6
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecc
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrD 259 (427)
.||.+|++-.. ++.....+++++|..+|++...+.... .+++.....+...++-|++++| ..+|+|||
T Consensus 55 ~~~f~v~lhya-----fqt~~kl~l~ld~~rgg~lft~l~~~~----~f~~~~~~~~~aelaLald~lh---~l~iiyrd 122 (612)
T KOG0603|consen 55 NTPFLVKLHYA-----FQTDGKLYLILDFLRGGDLFTRLSKEV----MFDELDVAFYLAELALALDHLH---KLGIAYRD 122 (612)
T ss_pred CCCceeeeeee-----eccccchhHhhhhcccchhhhccccCC----chHHHHHHHHHHHHHHHHhhcc---hhHHHHhc
Confidence 47888877655 444678899999999999999987764 4777888888999999999999 89999999
Q ss_pred ccCCceeeCCCCceEecccccccccCCcC--CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 260 LKPSNVLLDGELTAHVGDFGLAKFLPEAT--NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 260 lkp~NIll~~~~~~kL~DFG~a~~~~~~~--~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
+|++||+++.+|++|+.|||.++...+.. +||..|||||+.. .+..++|+||||++++||++|..||..
T Consensus 123 ~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 123 YKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred ccccceeecccCccccCCchhhhHhHhhhhcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 99999999999999999999999765544 6799999999987 678899999999999999999999975
No 420
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.74 E-value=5.7e-19 Score=167.37 Aligned_cols=121 Identities=26% Similarity=0.418 Sum_probs=104.4
Q ss_pred ccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccccCCceeeCCCCceEeccccc
Q 042634 201 SEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGL 280 (427)
Q Consensus 201 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~ 280 (427)
..++.|++|...+|.+|+..++.. ..-++...+.++.|++.|++| ++.+|||+||.||+...+..+||.|||+
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~-e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl 402 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTG-EERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGL 402 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcc-cccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhhh
Confidence 578999999999999999754332 446778899999999999998 5899999999999999999999999999
Q ss_pred ccccCCcC------------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCC
Q 042634 281 AKFLPEAT------------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPT 328 (427)
Q Consensus 281 a~~~~~~~------------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf 328 (427)
........ .||..||+||.+.+..|+.|+||||+|++++|++. -..+|
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~ 463 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQF 463 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHH
Confidence 87654322 78899999999999999999999999999999987 44443
No 421
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.72 E-value=2.1e-17 Score=156.48 Aligned_cols=202 Identities=29% Similarity=0.391 Sum_probs=145.7
Q ss_pred ccc-cchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 180 RHR-NLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 180 ~Hp-niv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.|+ +++++.+.+. .....+++++++.++++.+++...... ..++......++.|++.+++|+| ..+++||
T Consensus 55 ~~~~~i~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~H---~~~~~hr 125 (384)
T COG0515 55 NHPPNIVKLYDFFQ-----DEGSLYLVMEYVDGGSLEDLLKKIGRK-GPLSESEALFILAQILSALEYLH---SKGIIHR 125 (384)
T ss_pred cCCcceeeEEEEEe-----cCCEEEEEEecCCCCcHHHHHHhcccc-cCCCHHHHHHHHHHHHHHHHHHH---hCCeecc
Confidence 344 7888887752 233479999999999999666543211 25888999999999999999999 8999999
Q ss_pred cccCCceeeCCCC-ceEecccccccccCC------------cCCCccccccccccCC---CCcCccccchhHHHHHHHHH
Q 042634 259 DLKPSNVLLDGEL-TAHVGDFGLAKFLPE------------ATNNFFNFQIAEYGMG---SEVSTSGDVYSFGILLLETF 322 (427)
Q Consensus 259 Dlkp~NIll~~~~-~~kL~DFG~a~~~~~------------~~~~~~~y~aPE~~~~---~~~~~~~DiwS~G~vl~ell 322 (427)
|+||+||+++... .+|++|||.++.... ...++..|+|||...+ ..++...|+||+|+++++++
T Consensus 126 d~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~ 205 (384)
T COG0515 126 DIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELL 205 (384)
T ss_pred CCCHHHeeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHH
Confidence 9999999999988 799999999975432 2378889999999987 57889999999999999999
Q ss_pred hCCCCCCcccCC--CccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCC
Q 042634 323 TGKRPTNEMFTG--NLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSEL 400 (427)
Q Consensus 323 ~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~d 400 (427)
+|..||...... .......+.............. . ........+.+++.+|+..+
T Consensus 206 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~-~~~~~~~~~~~~~~~~~~~~ 262 (384)
T COG0515 206 TGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSP----------------------S-NPELISKAASDLLKKLLAKD 262 (384)
T ss_pred hCCCCCCCCCccccHHHHHHHHHhcCCcccccccCc----------------------c-ccchhhHHHHHHHHHHHhcC
Confidence 999997654221 1111111111111100000000 0 00223356788999999999
Q ss_pred CCCCCCHHHHHHH
Q 042634 401 PRERMNMEEVAAQ 413 (427)
Q Consensus 401 P~~Rpt~~ev~~~ 413 (427)
|..|.++.+....
T Consensus 263 ~~~r~~~~~~~~~ 275 (384)
T COG0515 263 PKNRLSSSSDLSH 275 (384)
T ss_pred chhcCCHHHHhhc
Confidence 9999999887765
No 422
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.72 E-value=5.6e-19 Score=168.18 Aligned_cols=176 Identities=28% Similarity=0.300 Sum_probs=138.9
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccC
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNL 81 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~ 81 (427)
|.|.+|.++-.-...|..|.++++|+|+.|+++..--.++.+|++|+.||||+|.+...-+..-..+++|++|+||+|++
T Consensus 250 lklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i 329 (873)
T KOG4194|consen 250 LKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRI 329 (873)
T ss_pred hhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEecccccc
Confidence 45667777755456688888888888888888843445788888888888888888866666666677888888888888
Q ss_pred cccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCc---cccccccccceeeeeeeccccC
Q 042634 82 TGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPS---SIGSCIRLEQLVMNGNFFRGNI 158 (427)
Q Consensus 82 ~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~---~~~~~~~l~~l~l~~n~l~~~~ 158 (427)
+...+..|..+..| ++|.|+.|+++-.--..|..+++|+.|||++|.+++.|.+ .|.++++|+.|++.+|++....
T Consensus 330 ~~l~~~sf~~L~~L-e~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~ 408 (873)
T KOG4194|consen 330 TRLDEGSFRVLSQL-EELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIP 408 (873)
T ss_pred ccCChhHHHHHHHh-hhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecc
Confidence 86666677778888 5788888888754456778888899999999988877765 4667888999999999988766
Q ss_pred CCCcccccCCceeeccCCcc
Q 042634 159 PSSLSSLRGIENLDLSRNNF 178 (427)
Q Consensus 159 p~~l~~l~~L~~L~L~~N~l 178 (427)
-.+|.++.+|+.|+|.+|-+
T Consensus 409 krAfsgl~~LE~LdL~~Nai 428 (873)
T KOG4194|consen 409 KRAFSGLEALEHLDLGDNAI 428 (873)
T ss_pred hhhhccCcccceecCCCCcc
Confidence 67888899999999888876
No 423
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.68 E-value=2.1e-17 Score=150.26 Aligned_cols=160 Identities=22% Similarity=0.263 Sum_probs=106.2
Q ss_pred ceeeeeecCCCccccccc---chhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccccCCceeeCCCCceEecccc
Q 042634 203 ALVYEFMVNGSLEEWLHP---NREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFG 279 (427)
Q Consensus 203 ~lv~e~~~~g~L~~~l~~---~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG 279 (427)
+++|+-+ .+||.+++.. .......+....+..+..|+++.+++|| ..|+||+||||+|++++.+|.++|+||+
T Consensus 115 ~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh---~~GlVHgdi~~~nfll~~~G~v~Lg~F~ 190 (288)
T PF14531_consen 115 FLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLH---SYGLVHGDIKPENFLLDQDGGVFLGDFS 190 (288)
T ss_dssp EEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEEEST-SGGGEEE-TTS-EEE--GG
T ss_pred hhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHh---hcceEecccceeeEEEcCCCCEEEcChH
Confidence 5667766 6788776542 1111123555667788899999999999 8999999999999999999999999998
Q ss_pred cccccCCcC---CCccccccccccCC--------CCcCccccchhHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhccc
Q 042634 280 LAKFLPEAT---NNFFNFQIAEYGMG--------SEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEALPE 348 (427)
Q Consensus 280 ~a~~~~~~~---~~~~~y~aPE~~~~--------~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 348 (427)
.....+... ..+..|.+||.... ..++.+.|.|++|+++|.+.+|+.||.........-.
T Consensus 191 ~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~--------- 261 (288)
T PF14531_consen 191 SLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW--------- 261 (288)
T ss_dssp GEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG---------
T ss_pred HHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc---------
Confidence 877654432 33456889997643 2468899999999999999999999975422111100
Q ss_pred chhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCC
Q 042634 349 RLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRER 404 (427)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~R 404 (427)
.|.. .. +.++.+.++++.+++.+|++|
T Consensus 262 --------------------------~f~~--C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 262 --------------------------DFSR--CR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp --------------------------GGTT--SS----HHHHHHHHHHT-SSGGGS
T ss_pred --------------------------cchh--cC-CcCHHHHHHHHHHccCCcccC
Confidence 0000 22 578889999999999999988
No 424
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.68 E-value=7.7e-19 Score=166.89 Aligned_cols=178 Identities=29% Similarity=0.429 Sum_probs=162.8
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccC
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNL 81 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~ 81 (427)
.||+.|++. .+|.+++.+..|+.+.|+.|.+. .+|..+.++..|++|||+.|+++ .+|..++.|+ |+.|-+++|++
T Consensus 80 aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl 155 (722)
T KOG0532|consen 80 ADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKL 155 (722)
T ss_pred hhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCcc
Confidence 589999999 89999999999999999999998 89999999999999999999999 9999999998 99999999999
Q ss_pred cccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCCC
Q 042634 82 TGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSS 161 (427)
Q Consensus 82 ~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~~ 161 (427)
+ .+|..++.+..| ..|+.+.|.+. .+|..++++.+|+.|.+..|++. .+|.+++ +-.|..||++.|+++ .+|..
T Consensus 156 ~-~lp~~ig~~~tl-~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~-~LpLi~lDfScNkis-~iPv~ 229 (722)
T KOG0532|consen 156 T-SLPEEIGLLPTL-AHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELC-SLPLIRLDFSCNKIS-YLPVD 229 (722)
T ss_pred c-cCCcccccchhH-HHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHh-CCceeeeecccCcee-ecchh
Confidence 8 888888888888 57999999997 89999999999999999999998 7999998 667899999999999 58999
Q ss_pred cccccCCceeeccCCcccccccchhhhc
Q 042634 162 LSSLRGIENLDLSRNNFIRHRNLVKIIT 189 (427)
Q Consensus 162 l~~l~~L~~L~L~~N~ll~Hpniv~~~~ 189 (427)
|.+|+.|+.|.|.+|.+..-|--|...|
T Consensus 230 fr~m~~Lq~l~LenNPLqSPPAqIC~kG 257 (722)
T KOG0532|consen 230 FRKMRHLQVLQLENNPLQSPPAQICEKG 257 (722)
T ss_pred hhhhhhheeeeeccCCCCCChHHHHhcc
Confidence 9999999999999999876654444433
No 425
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.67 E-value=6.6e-16 Score=146.52 Aligned_cols=187 Identities=23% Similarity=0.246 Sum_probs=140.3
Q ss_pred CCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccccCCceeeCCC-----Cce
Q 042634 199 NDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGE-----LTA 273 (427)
Q Consensus 199 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~~-----~~~ 273 (427)
+...++||+.+ |.+|.++..... ...++..++..++.|++.+|+++| +.|++||||||.|++++.. ..+
T Consensus 93 ~~~~~iVM~l~-G~sL~dl~~~~~--~~~fs~~T~l~ia~q~l~~l~~lH---~~G~iHRDiKp~N~~~g~~~~~~~~~~ 166 (322)
T KOG1164|consen 93 EDFNFIVMSLL-GPSLEDLRKRNP--PGRFSRKTVLRIAIQNLNALEDLH---SKGFIHRDIKPENFVVGQSSRSEVRTL 166 (322)
T ss_pred CceeEEEEecc-CccHHHHHHhCC--CCCcCHhHHHHHHHHHHHHHHHHH---hcCcccCCcCHHHeeecCCCCcccceE
Confidence 45679999988 999999775444 256999999999999999999999 9999999999999999754 479
Q ss_pred Eeccccccc--cc---------CC-c----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCCCcc
Q 042634 274 HVGDFGLAK--FL---------PE-A----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLT 337 (427)
Q Consensus 274 kL~DFG~a~--~~---------~~-~----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~~~~ 337 (427)
.|.|||+|+ .. .. . ..||..|+++....+.+.+.+.|+||++-++.|+..|..||........
T Consensus 167 ~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~- 245 (322)
T KOG1164|consen 167 YLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL- 245 (322)
T ss_pred EEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-
Confidence 999999998 31 01 1 1489999999999999999999999999999999999999965422211
Q ss_pred HHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 042634 338 LHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQLLSF 417 (427)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~L~~~ 417 (427)
..+....... ..... .....+.++.+++..+-+.+..++|.-..+...++..
T Consensus 246 ~~~~~~~~~~----~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~ 297 (322)
T KOG1164|consen 246 KSKFEKDPRK----LLTDR------------------------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDV 297 (322)
T ss_pred HHHHHHHhhh----hcccc------------------------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHH
Confidence 1111111000 00000 0111344566677767779999999999999998777
Q ss_pred HHH
Q 042634 418 RNK 420 (427)
Q Consensus 418 ~~~ 420 (427)
..+
T Consensus 298 ~~~ 300 (322)
T KOG1164|consen 298 FDS 300 (322)
T ss_pred HHh
Confidence 554
No 426
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.64 E-value=2.3e-16 Score=149.70 Aligned_cols=112 Identities=23% Similarity=0.223 Sum_probs=84.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|+|++..+.. ....++||||+++++|... ... . ...++.|+++||.||| +.||+||
T Consensus 78 L~h~~iv~~l~~--------~~~~~LVmE~~~G~~L~~~-~~~-------~---~~~~~~~i~~aL~~lH---~~gIiHr 135 (365)
T PRK09188 78 VRGIGVVPQLLA--------TGKDGLVRGWTEGVPLHLA-RPH-------G---DPAWFRSAHRALRDLH---RAGITHN 135 (365)
T ss_pred ccCCCCCcEEEE--------cCCcEEEEEccCCCCHHHh-Ccc-------c---hHHHHHHHHHHHHHHH---HCCCeeC
Confidence 468888853322 1246999999999999632 111 1 1467899999999999 8999999
Q ss_pred cc-cCCceeeCCCCceEecccccccccCCcC--------------CCccccccccccCCCC------cCccccch
Q 042634 259 DL-KPSNVLLDGELTAHVGDFGLAKFLPEAT--------------NNFFNFQIAEYGMGSE------VSTSGDVY 312 (427)
Q Consensus 259 Dl-kp~NIll~~~~~~kL~DFG~a~~~~~~~--------------~~~~~y~aPE~~~~~~------~~~~~Diw 312 (427)
|| ||+|||++.++.+||+|||+|+...... .+++.|+|||++...+ .+..+|-|
T Consensus 136 DL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 136 DLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred CCCCcceEEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 99 9999999999999999999999654322 4566799999986543 34456666
No 427
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.61 E-value=1.6e-16 Score=161.34 Aligned_cols=131 Identities=22% Similarity=0.253 Sum_probs=101.1
Q ss_pred HHHHHHHhhcCCCCeeeccccCCceeeCCCCceEecccccccccC---------------------CcCCCccccccccc
Q 042634 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLP---------------------EATNNFFNFQIAEY 299 (427)
Q Consensus 241 ~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~---------------------~~~~~~~~y~aPE~ 299 (427)
+.+++|+| ..||+|||+||+|.+|+.-|++|+.|||+++..- +..+||+.|.|||+
T Consensus 153 vla~Eylh---~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeV 229 (1205)
T KOG0606|consen 153 VLAVEYLH---SYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEV 229 (1205)
T ss_pred hHHhHhhc---cCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhh
Confidence 78899999 8999999999999999999999999999998531 12289999999999
Q ss_pred cCCCCcCccccchhHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccc
Q 042634 300 GMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRS 379 (427)
Q Consensus 300 ~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (427)
+..+.|+..+|+|++|+|+||.+.|..||.+...++ -+.+++...+. +.+
T Consensus 230 ilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpee-lfg~visd~i~--wpE--------------------------- 279 (1205)
T KOG0606|consen 230 ILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE-LFGQVISDDIE--WPE--------------------------- 279 (1205)
T ss_pred hhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHH-HHhhhhhhhcc--ccc---------------------------
Confidence 999999999999999999999999999997642111 11111111100 000
Q ss_pred cchHHHHHHHHHHHhhcCCCCCCCCC
Q 042634 380 FSVKECLVSVLGIGVTCSSELPRERM 405 (427)
Q Consensus 380 ~~~~~~~~~~~~l~~~cl~~dP~~Rp 405 (427)
..+..+.++.+++.+.++.+|.+|-
T Consensus 280 -~dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 280 -EDEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred -cCcCCCHHHHHHHHHHHHhChHhhc
Confidence 1122345678899999999999994
No 428
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.61 E-value=2.8e-15 Score=134.30 Aligned_cols=202 Identities=15% Similarity=0.174 Sum_probs=146.3
Q ss_pred cccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccc
Q 042634 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDL 260 (427)
Q Consensus 181 Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDl 260 (427)
.+.|-..+-. .+.+.+-.+|+|.+ |.||.+++.-.. +.|+.+++..+|.|++.-++|+| ++.+|.|||
T Consensus 83 ~~GIP~vYYF-----GqeG~~NiLVidLL-GPSLEDLFD~Cg---R~FSvKTV~miA~Qmi~rie~vH---~k~LIYRDI 150 (449)
T KOG1165|consen 83 TEGIPQVYYF-----GQEGKYNILVIDLL-GPSLEDLFDLCG---RRFSVKTVAMIAKQMITRIEYVH---EKDLIYRDI 150 (449)
T ss_pred CCCCCceeee-----ccccchhhhhhhhh-CcCHHHHHHHhc---CcccHHhHHHHHHHHHHHHHHHH---hcceeeccc
Confidence 3455444433 34456678999988 889988876554 56999999999999999999999 999999999
Q ss_pred cCCceeeCCC-----CceEecccccccccCCcC-------------CCccccccccccCCCCcCccccchhHHHHHHHHH
Q 042634 261 KPSNVLLDGE-----LTAHVGDFGLAKFLPEAT-------------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETF 322 (427)
Q Consensus 261 kp~NIll~~~-----~~~kL~DFG~a~~~~~~~-------------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell 322 (427)
||+|.||+.. ..+.++|||+|+.+.... .||..||+--.-.+.+-+.+-|.=|+|-++++.+
T Consensus 151 KPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFL 230 (449)
T KOG1165|consen 151 KPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFL 230 (449)
T ss_pred CccceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhc
Confidence 9999999654 468999999999764432 7899999999999999999999999999999999
Q ss_pred hCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCC
Q 042634 323 TGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPR 402 (427)
Q Consensus 323 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~ 402 (427)
.|..||++..... ..+...+.....-..-+ ....+..|.++..-++-.-..+-.
T Consensus 231 RGsLPWQGLKA~t--nK~kYeKIGe~Kr~T~i------------------------~~Lc~g~P~efa~Yl~yvR~L~F~ 284 (449)
T KOG1165|consen 231 RGSLPWQGLKADT--NKEKYEKIGETKRSTPI------------------------EVLCEGFPEEFATYLRYVRRLDFF 284 (449)
T ss_pred cCCCccccccCcc--hHHHHHHhccccccCCH------------------------HHHHhcCHHHHHHHHHHHHhcCcc
Confidence 9999999863222 11111111100000000 001233466677777766666777
Q ss_pred CCCCHHHHHHHHHHHHHH
Q 042634 403 ERMNMEEVAAQLLSFRNK 420 (427)
Q Consensus 403 ~Rpt~~ev~~~L~~~~~~ 420 (427)
+-|.-+-+...+..+.+.
T Consensus 285 E~PDYdylr~Lf~dvldr 302 (449)
T KOG1165|consen 285 ETPDYDYLRKLFDDVLDR 302 (449)
T ss_pred cCCCHHHHHHHHHHHHHh
Confidence 778877777666666554
No 429
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.60 E-value=1.5e-15 Score=130.25 Aligned_cols=188 Identities=19% Similarity=0.217 Sum_probs=139.1
Q ss_pred CCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccccCCceeeCCC---CceE
Q 042634 198 GNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGE---LTAH 274 (427)
Q Consensus 198 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~~---~~~k 274 (427)
+.....+||+.. |.+|.+++.-.. +.++..+++-++-|++.-++|+| .++.+||||||+|.|.+-+ .++-
T Consensus 82 e~~ynvlVMdLL-GPsLEdLfnfC~---R~ftmkTvLMLaDQml~RiEyvH---~r~fiHRDIKPdNFLMGlgrh~~kl~ 154 (341)
T KOG1163|consen 82 EKDYNVLVMDLL-GPSLEDLFNFCS---RRFTMKTVLMLADQMLSRIEYVH---LRNFIHRDIKPDNFLMGLGRHCNKLY 154 (341)
T ss_pred ccccceeeeecc-CccHHHHHHHHh---hhhhHHhHHHHHHHHHHHHHHHH---hhccccccCCccceeeccccccceEE
Confidence 355678999998 999998876443 56999999999999999999999 8999999999999998643 3688
Q ss_pred ecccccccccCCcC-------------CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCCC--ccHH
Q 042634 275 VGDFGLAKFLPEAT-------------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGN--LTLH 339 (427)
Q Consensus 275 L~DFG~a~~~~~~~-------------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~~--~~~~ 339 (427)
++|||+|+...+.. .||..|.+--...+.+-+.+-|+=|+|-++...-.|..||++..... ..+.
T Consensus 155 LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyE 234 (341)
T KOG1163|consen 155 LIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYE 234 (341)
T ss_pred EEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHH
Confidence 99999999764321 78888988777777778899999999999999999999999863221 1111
Q ss_pred HHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHH
Q 042634 340 NFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQLLSFRN 419 (427)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~L~~~~~ 419 (427)
........-.+.. .....|.++.-.+.-|-..--++-|.-.-+.+....+..
T Consensus 235 kI~EkK~s~~ie~----------------------------LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr 286 (341)
T KOG1163|consen 235 KISEKKMSTPIEV----------------------------LCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFR 286 (341)
T ss_pred HHHHhhcCCCHHH----------------------------HhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHh
Confidence 1111111111100 112246677888888888888888888777776666544
Q ss_pred H
Q 042634 420 K 420 (427)
Q Consensus 420 ~ 420 (427)
.
T Consensus 287 ~ 287 (341)
T KOG1163|consen 287 T 287 (341)
T ss_pred h
Confidence 3
No 430
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.60 E-value=1.6e-15 Score=131.21 Aligned_cols=128 Identities=16% Similarity=0.067 Sum_probs=92.1
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecc
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrD 259 (427)
+|+++.++++. ...+++|||+.|.+|.+.... ....++.|++.+|+++| ..||+|||
T Consensus 60 ~~~~vP~ll~~---------~~~~lvmeyI~G~~L~~~~~~-----------~~~~~~~qi~~~L~~lH---~~GIvHrD 116 (218)
T PRK12274 60 GLPRTPRLLHW---------DGRHLDRSYLAGAAMYQRPPR-----------GDLAYFRAARRLLQQLH---RCGVAHND 116 (218)
T ss_pred CCCCCCEEEEE---------cCEEEEEeeecCccHHhhhhh-----------hhHHHHHHHHHHHHHHH---HCcCccCC
Confidence 34666666654 235899999999888654311 11347889999999999 89999999
Q ss_pred c-cCCceeeCCCCceEecccccccccCCcC-------------------CCccccccccccCC-CCcC-ccccchhHHHH
Q 042634 260 L-KPSNVLLDGELTAHVGDFGLAKFLPEAT-------------------NNFFNFQIAEYGMG-SEVS-TSGDVYSFGIL 317 (427)
Q Consensus 260 l-kp~NIll~~~~~~kL~DFG~a~~~~~~~-------------------~~~~~y~aPE~~~~-~~~~-~~~DiwS~G~v 317 (427)
| ||+|||++.++.++|+|||+|....... ..++.|.+|+.-.. ...+ .+.++++-|+-
T Consensus 117 L~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~ 196 (218)
T PRK12274 117 LAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKP 196 (218)
T ss_pred CCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcch
Confidence 9 7999999999999999999998544322 12233344432211 1223 45678899999
Q ss_pred HHHHHhCCCCCCc
Q 042634 318 LLETFTGKRPTNE 330 (427)
Q Consensus 318 l~ell~g~~pf~~ 330 (427)
+|.++||+.++-+
T Consensus 197 ~~~~~~~~~~~~~ 209 (218)
T PRK12274 197 VYRFVTRRVLHWE 209 (218)
T ss_pred HHHHHhccCCccc
Confidence 9999999988654
No 431
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.58 E-value=4.1e-15 Score=153.29 Aligned_cols=162 Identities=24% Similarity=0.430 Sum_probs=97.7
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
.|+|++|+|+ .+|..+. ++|+.|+|++|+++ .+|..+. .+|+.|+|++|.++ .+|..+. ++|++|++++|+
T Consensus 203 ~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~ 273 (754)
T PRK15370 203 TLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNK 273 (754)
T ss_pred EEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCc
Confidence 3688888888 5676554 47888888888887 5776553 35666666666666 5665543 356666666666
Q ss_pred CcccCCCCccccccccceeeccCCcCcCCCCCCCc-------------------CCCCCCeEECcCCcccccCCcccccc
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFG-------------------ILKNLGAIDISENKLSGQIPSSIGSC 141 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~-------------------~l~~L~~l~l~~n~~~~~~p~~~~~~ 141 (427)
++ .+|..+. .+| ..|+|++|+++ .+|..+. -.++|+.|++++|.++ .+|..+.
T Consensus 274 L~-~LP~~l~--~sL-~~L~Ls~N~Lt-~LP~~lp~sL~~L~Ls~N~Lt~LP~~l~~sL~~L~Ls~N~Lt-~LP~~l~-- 345 (754)
T PRK15370 274 IS-CLPENLP--EEL-RYLSVYDNSIR-TLPAHLPSGITHLNVQSNSLTALPETLPPGLKTLEAGENALT-SLPASLP-- 345 (754)
T ss_pred cC-ccccccC--CCC-cEEECCCCccc-cCcccchhhHHHHHhcCCccccCCccccccceeccccCCccc-cCChhhc--
Confidence 65 3444332 244 34555555554 3333221 1245666666666666 3565543
Q ss_pred ccccceeeeeeeccccCCCCcccccCCceeeccCCcccccc
Q 042634 142 IRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIRHR 182 (427)
Q Consensus 142 ~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~ll~Hp 182 (427)
++|+.|++++|.++. +|..+. ++|+.|++++|++...|
T Consensus 346 ~sL~~L~Ls~N~L~~-LP~~lp--~~L~~LdLs~N~Lt~LP 383 (754)
T PRK15370 346 PELQVLDVSKNQITV-LPETLP--PTITTLDVSRNALTNLP 383 (754)
T ss_pred CcccEEECCCCCCCc-CChhhc--CCcCEEECCCCcCCCCC
Confidence 567777777777763 454442 46777777777776555
No 432
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.57 E-value=3.9e-15 Score=153.37 Aligned_cols=158 Identities=26% Similarity=0.432 Sum_probs=122.1
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
.|+|+++.++ .+|..+. ++|+.|+|++|+++ .+|..+. ++|+.|++++|+|+ .+|..+. ++|+.|++++|.
T Consensus 182 ~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~ 252 (754)
T PRK15370 182 ELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINR 252 (754)
T ss_pred EEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCc
Confidence 3789999999 6787664 58999999999999 7998775 59999999999999 8887664 479999999999
Q ss_pred CcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCC
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPS 160 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~ 160 (427)
++ .+|..+. .+| ..|++++|+++ .+|..+. ++|+.|++++|+++ .+|..+. .+|+.|++++|.++. +|.
T Consensus 253 L~-~LP~~l~--s~L-~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~lp--~sL~~L~Ls~N~Lt~-LP~ 321 (754)
T PRK15370 253 IT-ELPERLP--SAL-QSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIR-TLPAHLP--SGITHLNVQSNSLTA-LPE 321 (754)
T ss_pred cC-cCChhHh--CCC-CEEECcCCccC-ccccccC--CCCcEEECCCCccc-cCcccch--hhHHHHHhcCCcccc-CCc
Confidence 98 7776653 467 68999999998 6888764 58999999999999 5776554 356777777777764 343
Q ss_pred CcccccCCceeeccCCcccc
Q 042634 161 SLSSLRGIENLDLSRNNFIR 180 (427)
Q Consensus 161 ~l~~l~~L~~L~L~~N~ll~ 180 (427)
.+. ++|+.|++++|.+..
T Consensus 322 ~l~--~sL~~L~Ls~N~Lt~ 339 (754)
T PRK15370 322 TLP--PGLKTLEAGENALTS 339 (754)
T ss_pred ccc--ccceeccccCCcccc
Confidence 322 355555555555543
No 433
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.57 E-value=5.7e-16 Score=136.79 Aligned_cols=121 Identities=11% Similarity=0.196 Sum_probs=87.7
Q ss_pred cccccchhhhccccccC---CCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 042634 179 IRHRNLVKIITSCASVD---FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~---~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~i 255 (427)
+.||+|....+...... +......+++|||++|.+|.++.. +++ ....+++.++..+| ..|+
T Consensus 92 L~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~--------~~~----~~~~~i~~~l~~lH---~~gi 156 (232)
T PRK10359 92 VRSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE--------ISE----DVKAKIKASIESLH---QHGM 156 (232)
T ss_pred HHHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh--------ccH----HHHHHHHHHHHHHH---HcCC
Confidence 46788777665533211 111345789999999999977631 222 24569999999999 9999
Q ss_pred eeccccCCceeeCCCCceEecccccccccCCcCCCccccccccccCCCCcCccccchhHHHHHHHH
Q 042634 256 VHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLET 321 (427)
Q Consensus 256 vHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~el 321 (427)
+|||+||+||+++.++ ++|+|||.++......... .+.....++.++||||||+++.-.
T Consensus 157 ~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~a~d------~~vler~y~~~~di~~lg~~~~~~ 215 (232)
T PRK10359 157 VSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRKAKD------RIDLERHYGIKNEIKDLGYYLLIY 215 (232)
T ss_pred ccCCCChHHEEEeCCC-EEEEECCCcccccchhhHH------HHHHHhHhcccccccceeEeehHH
Confidence 9999999999999888 9999999887664332111 133445577899999999987654
No 434
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.55 E-value=9.9e-15 Score=149.72 Aligned_cols=74 Identities=27% Similarity=0.315 Sum_probs=52.2
Q ss_pred ceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCCCcccccCCceeeccCC
Q 042634 97 IYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRN 176 (427)
Q Consensus 97 ~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N 176 (427)
..|++++|+++ .+|.. .++|+.|++++|+++ .+|... .+|+.|++++|+++ .+|..+..++++..+++++|
T Consensus 385 ~~LdLs~N~Lt-~LP~l---~s~L~~LdLS~N~Ls-sIP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N 455 (788)
T PRK15387 385 KELIVSGNRLT-SLPVL---PSELKELMVSGNRLT-SLPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGN 455 (788)
T ss_pred ceEEecCCccc-CCCCc---ccCCCEEEccCCcCC-CCCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCCC
Confidence 34666666665 35543 245677777777777 466543 35677888888887 47888888899999999999
Q ss_pred ccc
Q 042634 177 NFI 179 (427)
Q Consensus 177 ~ll 179 (427)
.+.
T Consensus 456 ~Ls 458 (788)
T PRK15387 456 PLS 458 (788)
T ss_pred CCC
Confidence 885
No 435
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.55 E-value=1.5e-16 Score=159.23 Aligned_cols=199 Identities=26% Similarity=0.391 Sum_probs=140.2
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
++|++.|+++ .+|.+++.+.+|+.|+..+|+++ ++|..+...++|++|.+.+|.++ .+|+....+++|++|+|..|+
T Consensus 245 ~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~ 321 (1081)
T KOG0618|consen 245 YLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNN 321 (1081)
T ss_pred eeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhcc
Confidence 4799999999 66899999999999999999997 89999999999999999999999 999999999999999999999
Q ss_pred CcccCCCC-ccccc-------------------------cccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccC
Q 042634 81 LTGTTPTE-VIGLS-------------------------SLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQI 134 (427)
Q Consensus 81 ~~~~~p~~-~~~l~-------------------------~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~ 134 (427)
+. .+|.. +..+. .| +.|.+.+|+++...-.-+-+.+.|+.|+|++|++. ++
T Consensus 322 L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~L-q~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~-~f 398 (1081)
T KOG0618|consen 322 LP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAAL-QELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLN-SF 398 (1081)
T ss_pred cc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHH-HHHHHhcCcccccchhhhccccceeeeeecccccc-cC
Confidence 98 44443 22111 11 24666666666554445566667777777777776 56
Q ss_pred Cc-cccccccccceeeeeeeccccCCCCcccccCCceeeccCCcccccccchhhhccccccCCCCCCccceeee
Q 042634 135 PS-SIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYE 207 (427)
Q Consensus 135 p~-~~~~~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~ll~Hpniv~~~~~~~~~~~~~~~~~~lv~e 207 (427)
|+ .+.++..|+.|+||+|+++. +|..+..+..|+.|...+|++..-|++.++- ....+|.+.++...+..+
T Consensus 399 pas~~~kle~LeeL~LSGNkL~~-Lp~tva~~~~L~tL~ahsN~l~~fPe~~~l~-qL~~lDlS~N~L~~~~l~ 470 (1081)
T KOG0618|consen 399 PASKLRKLEELEELNLSGNKLTT-LPDTVANLGRLHTLRAHSNQLLSFPELAQLP-QLKVLDLSCNNLSEVTLP 470 (1081)
T ss_pred CHHHHhchHHhHHHhcccchhhh-hhHHHHhhhhhHHHhhcCCceeechhhhhcC-cceEEecccchhhhhhhh
Confidence 65 45667777777777777763 4566666666666655556665556443322 223334444444433333
No 436
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.55 E-value=2.4e-14 Score=146.93 Aligned_cols=164 Identities=24% Similarity=0.325 Sum_probs=83.3
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCC-------------
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKC------------- 68 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l------------- 68 (427)
|||++|.|+ .+|+.+.. +|+.|++++|+++ .+|.. +++|++|+|++|+|+ .+|....++
T Consensus 206 LdLs~~~Lt-sLP~~l~~--~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lt-sLP~lp~sL~~L~Ls~N~L~~L 277 (788)
T PRK15387 206 LNVGESGLT-TLPDCLPA--HITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLT-SLPVLPPGLLELSIFSNPLTHL 277 (788)
T ss_pred EEcCCCCCC-cCCcchhc--CCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccC-cccCcccccceeeccCCchhhh
Confidence 677777777 56765542 5666666666665 45532 345555555555555 444321110
Q ss_pred ----CCCCeEEccCccCcccCCCCccccccccceeeccCCcCcCCCCCC---CcC--------------CCCCCeEECcC
Q 042634 69 ----QNLILLDLSNNNLTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSN---FGI--------------LKNLGAIDISE 127 (427)
Q Consensus 69 ----~~L~~l~l~~N~~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~---~~~--------------l~~L~~l~l~~ 127 (427)
++|+.|++++|+++ .+|.. +++| +.|+|++|++++ +|.. +.. ..+|+.|+|++
T Consensus 278 p~lp~~L~~L~Ls~N~Lt-~LP~~---p~~L-~~LdLS~N~L~~-Lp~lp~~L~~L~Ls~N~L~~LP~lp~~Lq~LdLS~ 351 (788)
T PRK15387 278 PALPSGLCKLWIFGNQLT-SLPVL---PPGL-QELSVSDNQLAS-LPALPSELCKLWAYNNQLTSLPTLPSGLQELSVSD 351 (788)
T ss_pred hhchhhcCEEECcCCccc-ccccc---cccc-ceeECCCCcccc-CCCCcccccccccccCccccccccccccceEecCC
Confidence 11223333333333 12211 1233 344455554442 2221 100 12567777777
Q ss_pred CcccccCCccccc-----------------cccccceeeeeeeccccCCCCcccccCCceeeccCCcccccccc
Q 042634 128 NKLSGQIPSSIGS-----------------CIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIRHRNL 184 (427)
Q Consensus 128 n~~~~~~p~~~~~-----------------~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~ll~Hpni 184 (427)
|+|+ .+|....+ ..+|+.|++++|.+++ +|.. .++|..|++++|.+..-|..
T Consensus 352 N~Ls-~LP~lp~~L~~L~Ls~N~L~~LP~l~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~LssIP~l 420 (788)
T PRK15387 352 NQLA-SLPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTSLPML 420 (788)
T ss_pred CccC-CCCCCCcccceehhhccccccCcccccccceEEecCCcccC-CCCc---ccCCCEEEccCCcCCCCCcc
Confidence 7776 34432211 1356677777777774 4432 25678888888888766654
No 437
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.51 E-value=7.7e-14 Score=152.88 Aligned_cols=170 Identities=27% Similarity=0.332 Sum_probs=102.7
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccC
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNL 81 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~ 81 (427)
|+|++|++. .+|..+..+++|+.|+|++|...+.+|. ++.+++|+.|+|++|.....+|..++.+++|++|++++|..
T Consensus 616 L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~ 693 (1153)
T PLN03210 616 LQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCEN 693 (1153)
T ss_pred EECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCC
Confidence 667777776 5677777777777777776654446654 77777777777777665557777777777777777777654
Q ss_pred cccCCCCccccccccceeeccCCcCcC--------------------CCCCCC---------------------------
Q 042634 82 TGTTPTEVIGLSSLSIYLDLSQNQLNG--------------------PLPSNF--------------------------- 114 (427)
Q Consensus 82 ~~~~p~~~~~l~~l~~~L~l~~n~~~~--------------------~~p~~~--------------------------- 114 (427)
-..+|..+ ++.+| ..|++++|...+ .+|..+
T Consensus 694 L~~Lp~~i-~l~sL-~~L~Lsgc~~L~~~p~~~~nL~~L~L~~n~i~~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~ 771 (1153)
T PLN03210 694 LEILPTGI-NLKSL-YRLNLSGCSRLKSFPDISTNISWLDLDETAIEEFPSNLRLENLDELILCEMKSEKLWERVQPLTP 771 (1153)
T ss_pred cCccCCcC-CCCCC-CEEeCCCCCCccccccccCCcCeeecCCCccccccccccccccccccccccchhhccccccccch
Confidence 44566543 34444 344444443322 333221
Q ss_pred ---cCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCCCcccccCCceeeccCC
Q 042634 115 ---GILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRN 176 (427)
Q Consensus 115 ---~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N 176 (427)
...++|+.|++++|...+.+|.+++++++|+.|++++|..-+.+|..+ .+++|+.|++++|
T Consensus 772 ~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c 835 (1153)
T PLN03210 772 LMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGC 835 (1153)
T ss_pred hhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCC
Confidence 012355666666665555677777777777777777654333455443 4555555555554
No 438
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.51 E-value=3.3e-15 Score=151.01 Aligned_cols=194 Identities=25% Similarity=0.291 Sum_probs=148.7
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCccccc-ccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWL-HPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l-~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
+|+|++.+++.. ......+++++|..++++.+.+ .... ...+...+..++.|+..|+.|+|. ..++.||
T Consensus 79 ~h~n~~~~~~~~-----~~~~~~~~~~~~s~g~~~f~~i~~~~~---~~~~~~~~~~~~~ql~s~l~~~H~--~~~~~h~ 148 (601)
T KOG0590|consen 79 KHSNTVHMIEPS-----SSPRSYLLSLSYSDGGSLFSKISHPDS---TGTSSSSASRYLPQLNSGLSYLHP--ENGVTHR 148 (601)
T ss_pred ccccccccCCcc-----CCCcccccccCcccccccccccccCCc---cCCCCcchhhhhhhhccCccccCc--ccccccC
Confidence 399999999884 3356788999999999999988 4432 246777889999999999999995 6899999
Q ss_pred cccCCceeeCCCC-ceEecccccccccCC-cC--------CC-ccccccccccCCCCc-CccccchhHHHHHHHHHhCCC
Q 042634 259 DLKPSNVLLDGEL-TAHVGDFGLAKFLPE-AT--------NN-FFNFQIAEYGMGSEV-STSGDVYSFGILLLETFTGKR 326 (427)
Q Consensus 259 Dlkp~NIll~~~~-~~kL~DFG~a~~~~~-~~--------~~-~~~y~aPE~~~~~~~-~~~~DiwS~G~vl~ell~g~~ 326 (427)
|+||+|.+++..+ ..|++|||+|..... .. .| ++.|+|||...+..+ .+..|+||.|+++.-+++|..
T Consensus 149 ~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~ 228 (601)
T KOG0590|consen 149 DIKPSNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGEL 228 (601)
T ss_pred CCCCccchhccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCC
Confidence 9999999999999 999999999987755 21 77 899999999988544 678999999999999999999
Q ss_pred CCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC
Q 042634 327 PTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN 406 (427)
Q Consensus 327 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt 406 (427)
|+.........+..+.... ................++..+++..+|..|.+
T Consensus 229 p~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s 279 (601)
T KOG0590|consen 229 PWDFPSRKDGRYSSWKSNK-----------------------------GRFTQLPWNSISDQAHDLLHKILKENPSNRLS 279 (601)
T ss_pred Cccccccccccceeecccc-----------------------------cccccCccccCChhhhhcccccccCCchhccc
Confidence 9875433332222221111 00001122233445678888999999999999
Q ss_pred HHHHHH
Q 042634 407 MEEVAA 412 (427)
Q Consensus 407 ~~ev~~ 412 (427)
.+++..
T Consensus 280 ~~~~~~ 285 (601)
T KOG0590|consen 280 IEELKL 285 (601)
T ss_pred cccccc
Confidence 887643
No 439
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.50 E-value=2.9e-14 Score=127.73 Aligned_cols=147 Identities=23% Similarity=0.390 Sum_probs=121.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
+.|.|+|++..++.+..+.+.....++.|||.-|++.++|++.....+.+....-.+|+.||..||.|||+. ...|+|+
T Consensus 124 lvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~Ppiihg 202 (458)
T KOG1266|consen 124 LVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DPPIIHG 202 (458)
T ss_pred HHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CCccccC
Confidence 569999999999888776666778899999999999999988777667788888999999999999999965 7889999
Q ss_pred cccCCceeeCCCCceEecccccccccCC----------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE----------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKR 326 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~----------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~ 326 (427)
++..+-|++..++-+|+.--.-...... ...+-++|.+||+-.....+.++|||+||+...||..+..
T Consensus 203 nlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEi 280 (458)
T KOG1266|consen 203 NLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEI 280 (458)
T ss_pred CcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHhee
Confidence 9999999999999888754322211110 1145678999999877788899999999999999988764
No 440
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.49 E-value=3e-14 Score=124.17 Aligned_cols=76 Identities=18% Similarity=0.188 Sum_probs=63.9
Q ss_pred cceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHH-hhcCCCCeeeccccCCceeeCCCCceEeccccc
Q 042634 202 EALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYL-HHYCETPIVHCDLKPSNVLLDGELTAHVGDFGL 280 (427)
Q Consensus 202 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~L-H~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~ 280 (427)
.++||||++++++....... ..++...+..++.|++.+|.|+ | ..||+||||||+||+++ ++.++|+|||+
T Consensus 92 ~~iVmE~i~g~~l~~~~~~~----~~~~~~~~~~i~~qi~~~L~~l~H---~~giiHrDlkP~NIli~-~~~v~LiDFG~ 163 (190)
T cd05147 92 HVLVMEFIGDDGWAAPRLKD----APLSESKARELYLQVIQIMRILYQ---DCRLVHADLSEYNLLYH-DGKLYIIDVSQ 163 (190)
T ss_pred CEEEEEEeCCCCCcchhhhc----CCCCHHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEE-CCcEEEEEccc
Confidence 38999999887765543222 3488899999999999999999 6 78999999999999998 47899999999
Q ss_pred ccccC
Q 042634 281 AKFLP 285 (427)
Q Consensus 281 a~~~~ 285 (427)
|....
T Consensus 164 a~~~~ 168 (190)
T cd05147 164 SVEHD 168 (190)
T ss_pred cccCC
Confidence 97653
No 441
>PLN03150 hypothetical protein; Provisional
Probab=99.49 E-value=3.4e-14 Score=145.55 Aligned_cols=113 Identities=33% Similarity=0.511 Sum_probs=100.1
Q ss_pred CCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccCcccCCCCccccccccceeec
Q 042634 22 KLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNLTGTTPTEVIGLSSLSIYLDL 101 (427)
Q Consensus 22 ~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~~l~~l~~~L~l 101 (427)
.++.|+|++|.++|.+|..++.+++|+.|+|++|.++|.+|..++.+++|+.|+|++|+++|.+|..++++.+| +.|+|
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L-~~L~L 497 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSL-RILNL 497 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCC-CEEEC
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999 67999
Q ss_pred cCCcCcCCCCCCCcCC-CCCCeEECcCCcccccCC
Q 042634 102 SQNQLNGPLPSNFGIL-KNLGAIDISENKLSGQIP 135 (427)
Q Consensus 102 ~~n~~~~~~p~~~~~l-~~L~~l~l~~n~~~~~~p 135 (427)
++|+++|.+|..++.+ .++..+++++|......|
T Consensus 498 s~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p 532 (623)
T PLN03150 498 NGNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIP 532 (623)
T ss_pred cCCcccccCChHHhhccccCceEEecCCccccCCC
Confidence 9999999999988764 467889999986543333
No 442
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.49 E-value=1.4e-15 Score=144.95 Aligned_cols=152 Identities=30% Similarity=0.443 Sum_probs=136.8
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccC
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNL 81 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~ 81 (427)
+.|..|++. .+|..++.|..|++|||+.|+++ .+|..+..|+ |+.|-++||+++ .+|..++.+..|..||.|.|.+
T Consensus 103 liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei 178 (722)
T KOG0532|consen 103 LILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEI 178 (722)
T ss_pred HHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhhhhh
Confidence 457789999 89999999999999999999998 8999887775 799999999999 9999999888999999999999
Q ss_pred cccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCCC
Q 042634 82 TGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSS 161 (427)
Q Consensus 82 ~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~~ 161 (427)
. .+|..++++.+| ..|++..|++. .+|.+.+.| .|..||++.|+++ .||-.|.+|+.|+.|-|.+|.++.+ |.+
T Consensus 179 ~-slpsql~~l~sl-r~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLqSP-PAq 252 (722)
T KOG0532|consen 179 Q-SLPSQLGYLTSL-RDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQSP-PAQ 252 (722)
T ss_pred h-hchHHhhhHHHH-HHHHHhhhhhh-hCCHHHhCC-ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCCCC-hHH
Confidence 8 888889999999 56999999997 799998855 5999999999999 8999999999999999999999964 555
Q ss_pred cc
Q 042634 162 LS 163 (427)
Q Consensus 162 l~ 163 (427)
+.
T Consensus 253 IC 254 (722)
T KOG0532|consen 253 IC 254 (722)
T ss_pred HH
Confidence 53
No 443
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.49 E-value=7.7e-16 Score=140.71 Aligned_cols=125 Identities=26% Similarity=0.382 Sum_probs=89.9
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeecc-ccCcccCCcC-ccCCCCCCeEEccCc
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAE-NMLEGSIPSS-LGKCQNLILLDLSNN 79 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~-n~l~~~~p~~-~~~l~~L~~l~l~~N 79 (427)
+.|..|+|+...|..|+.+.+|+.||||+|+|+-.-|..|.++.+|..|-+-+ |+|+ .+|.. |+++.+|+.|.+.-|
T Consensus 72 irLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~-~l~k~~F~gL~slqrLllNan 150 (498)
T KOG4237|consen 72 IRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKIT-DLPKGAFGGLSSLQRLLLNAN 150 (498)
T ss_pred EEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchh-hhhhhHhhhHHHHHHHhcChh
Confidence 67888888866667888899999999999988865677888888877766654 8888 77754 777888888777777
Q ss_pred cCcccCCCCccccccccceeeccCCcCcCCCCC-CCcCCCCCCeEECcCCc
Q 042634 80 NLTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPS-NFGILKNLGAIDISENK 129 (427)
Q Consensus 80 ~~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~-~~~~l~~L~~l~l~~n~ 129 (427)
++.-.....|..++++ ..|.+..|.+. .++. +|..+..++.+.+..|.
T Consensus 151 ~i~Cir~~al~dL~~l-~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np 199 (498)
T KOG4237|consen 151 HINCIRQDALRDLPSL-SLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNP 199 (498)
T ss_pred hhcchhHHHHHHhhhc-chhcccchhhh-hhccccccchhccchHhhhcCc
Confidence 7776666666667666 45777777765 4443 55555555555554444
No 444
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.48 E-value=1.7e-15 Score=151.83 Aligned_cols=170 Identities=28% Similarity=0.343 Sum_probs=138.8
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchh--------------------------ccccCCEeeeccc
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIG--------------------------NLTLLITLNFAEN 55 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~--------------------------~l~~L~~L~l~~n 55 (427)
|+...|.+. -+|+....++.|+.|+|..|++. .+|+.+- .++.|+.|++.+|
T Consensus 292 l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN 369 (1081)
T KOG0618|consen 292 LSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANN 369 (1081)
T ss_pred HHhhhhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcC
Confidence 345566776 67787788888888888888886 5655221 1344888999999
Q ss_pred cCcccCCcCccCCCCCCeEEccCccCcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCC
Q 042634 56 MLEGSIPSSLGKCQNLILLDLSNNNLTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIP 135 (427)
Q Consensus 56 ~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p 135 (427)
.|+...-+.+...+.|+.|+|++|++.......+.++..| ++|+|++|.++ .+|.++.++.+|++|...+|++. .+|
T Consensus 370 ~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~L-eeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP 446 (1081)
T KOG0618|consen 370 HLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEEL-EELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP 446 (1081)
T ss_pred cccccchhhhccccceeeeeecccccccCCHHHHhchHHh-HHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech
Confidence 9998777788889999999999999985665778889899 68999999998 89999999999999999999998 788
Q ss_pred ccccccccccceeeeeeeccccC-CCCcccccCCceeeccCCcc
Q 042634 136 SSIGSCIRLEQLVMNGNFFRGNI-PSSLSSLRGIENLDLSRNNF 178 (427)
Q Consensus 136 ~~~~~~~~l~~l~l~~n~l~~~~-p~~l~~l~~L~~L~L~~N~l 178 (427)
++..++.|+++|++.|.++... |.... .++|++||+++|.-
T Consensus 447 -e~~~l~qL~~lDlS~N~L~~~~l~~~~p-~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 447 -ELAQLPQLKVLDLSCNNLSEVTLPEALP-SPNLKYLDLSGNTR 488 (1081)
T ss_pred -hhhhcCcceEEecccchhhhhhhhhhCC-CcccceeeccCCcc
Confidence 8899999999999999998543 33332 38999999999873
No 445
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.48 E-value=2.1e-14 Score=140.37 Aligned_cols=174 Identities=39% Similarity=0.504 Sum_probs=127.5
Q ss_pred eeecCCcccccCCccccCCC-CCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 2 FTLVGNQFTGRIPGSIGDLH-KLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~-~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
|++.+|.++ .+|+....+. +|+.|++++|++. .+|..++.+++|+.|++++|+++ .+|...+.+++|+.|++++|+
T Consensus 121 L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~N~ 197 (394)
T COG4886 121 LDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNK 197 (394)
T ss_pred EecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheeccCCc
Confidence 567777777 6677777774 7888888888887 67777788888888888888888 777777677778888888888
Q ss_pred CcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCC
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPS 160 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~ 160 (427)
++ .+|.....+..| .+|.+++|+.. ..+..+.+++++..+.+++|++. .++..++.+++++.|++++|.++.. +.
T Consensus 198 i~-~l~~~~~~~~~L-~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~~i-~~ 272 (394)
T COG4886 198 IS-DLPPEIELLSAL-EELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQISSI-SS 272 (394)
T ss_pred cc-cCchhhhhhhhh-hhhhhcCCcce-ecchhhhhcccccccccCCceee-eccchhccccccceecccccccccc-cc
Confidence 87 666544444456 56777888543 56777777777777777888776 4577777777788888888888753 33
Q ss_pred CcccccCCceeeccCCcccccccc
Q 042634 161 SLSSLRGIENLDLSRNNFIRHRNL 184 (427)
Q Consensus 161 ~l~~l~~L~~L~L~~N~ll~Hpni 184 (427)
++.+..++.+++++|.+...++.
T Consensus 273 -~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 273 -LGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred -ccccCccCEEeccCccccccchh
Confidence 77777888888887777655443
No 446
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.45 E-value=3.8e-15 Score=141.34 Aligned_cols=177 Identities=22% Similarity=0.225 Sum_probs=131.0
Q ss_pred eeecCCccc------ccCCccccCCCCCCEeeeecccceeecCcchhcccc---CCEeeeccccCcc----cCCcCccCC
Q 042634 2 FTLVGNQFT------GRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTL---LITLNFAENMLEG----SIPSSLGKC 68 (427)
Q Consensus 2 l~l~~n~l~------~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~---L~~L~l~~n~l~~----~~p~~~~~l 68 (427)
|++++|.+. ..++..+..+++|+.|+|++|.+.+..+..+..+.+ |++|++++|.+++ .+...+..+
T Consensus 56 l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~ 135 (319)
T cd00116 56 LCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDL 135 (319)
T ss_pred EeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhC
Confidence 577777776 234566788899999999999998667777777776 9999999999883 334456666
Q ss_pred -CCCCeEEccCccCccc----CCCCccccccccceeeccCCcCcCC----CCCCCcCCCCCCeEECcCCccccc----CC
Q 042634 69 -QNLILLDLSNNNLTGT----TPTEVIGLSSLSIYLDLSQNQLNGP----LPSNFGILKNLGAIDISENKLSGQ----IP 135 (427)
Q Consensus 69 -~~L~~l~l~~N~~~~~----~p~~~~~l~~l~~~L~l~~n~~~~~----~p~~~~~l~~L~~l~l~~n~~~~~----~p 135 (427)
++|++|++++|.+++. ++..+..+..+ +.|++++|.+++. ++..+..+++|+.|++++|.+++. ++
T Consensus 136 ~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L-~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~ 214 (319)
T cd00116 136 PPALEKLVLGRNRLEGASCEALAKALRANRDL-KELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALA 214 (319)
T ss_pred CCCceEEEcCCCcCCchHHHHHHHHHHhCCCc-CEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHH
Confidence 8899999999999843 23345556678 6799999999742 334455667999999999988743 33
Q ss_pred ccccccccccceeeeeeeccccCCCCcc-----cccCCceeeccCCccc
Q 042634 136 SSIGSCIRLEQLVMNGNFFRGNIPSSLS-----SLRGIENLDLSRNNFI 179 (427)
Q Consensus 136 ~~~~~~~~l~~l~l~~n~l~~~~p~~l~-----~l~~L~~L~L~~N~ll 179 (427)
..+..+++|+.|++++|.+++.....+. ..+.|+.|++++|.+.
T Consensus 215 ~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~ 263 (319)
T cd00116 215 ETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDIT 263 (319)
T ss_pred HHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCC
Confidence 4566778899999999988763333322 2378999999998875
No 447
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.45 E-value=9.2e-14 Score=121.45 Aligned_cols=77 Identities=21% Similarity=0.172 Sum_probs=64.0
Q ss_pred cceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCC-CCeeeccccCCceeeCCCCceEeccccc
Q 042634 202 EALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCE-TPIVHCDLKPSNVLLDGELTAHVGDFGL 280 (427)
Q Consensus 202 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~-~~ivHrDlkp~NIll~~~~~~kL~DFG~ 280 (427)
.++||||++++++....... ..++......++.|++.++.++| . .||+||||||+||+++ ++.++|+|||+
T Consensus 92 ~~lVmE~~~g~~~~~~~l~~----~~~~~~~~~~i~~~l~~~l~~lH---~~~givHrDlkP~NIll~-~~~~~liDFG~ 163 (190)
T cd05145 92 NVLVMEFIGDDGSPAPRLKD----VPLEEEEAEELYEQVVEQMRRLY---QEAGLVHGDLSEYNILYH-DGKPYIIDVSQ 163 (190)
T ss_pred CEEEEEEecCCCchhhhhhh----ccCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCChhhEEEE-CCCEEEEEccc
Confidence 48999999887554332111 34778889999999999999999 6 9999999999999999 78999999999
Q ss_pred ccccCC
Q 042634 281 AKFLPE 286 (427)
Q Consensus 281 a~~~~~ 286 (427)
|+....
T Consensus 164 a~~~~~ 169 (190)
T cd05145 164 AVELDH 169 (190)
T ss_pred ceecCC
Confidence 987643
No 448
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.45 E-value=7e-13 Score=145.42 Aligned_cols=148 Identities=26% Similarity=0.269 Sum_probs=101.9
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccC
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNL 81 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~ 81 (427)
|+|++|...+.+|. ++.+++|+.|+|++|.....+|..++++++|+.|++++|..-+.+|..+ ++++|++|++++|..
T Consensus 639 L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~ 716 (1153)
T PLN03210 639 IDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSR 716 (1153)
T ss_pred EECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCC
Confidence 67777665446664 7788888888888876656788888888888888888764444777655 566666666655533
Q ss_pred cc--------------------cCCCCc------------------------------cccccccceeeccCCcCcCCCC
Q 042634 82 TG--------------------TTPTEV------------------------------IGLSSLSIYLDLSQNQLNGPLP 111 (427)
Q Consensus 82 ~~--------------------~~p~~~------------------------------~~l~~l~~~L~l~~n~~~~~~p 111 (427)
.+ .+|..+ ...++| +.|+|++|...+.+|
T Consensus 717 L~~~p~~~~nL~~L~L~~n~i~~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL-~~L~Ls~n~~l~~lP 795 (1153)
T PLN03210 717 LKSFPDISTNISWLDLDETAIEEFPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSL-TRLFLSDIPSLVELP 795 (1153)
T ss_pred ccccccccCCcCeeecCCCccccccccccccccccccccccchhhccccccccchhhhhccccc-hheeCCCCCCccccC
Confidence 22 233211 011345 468888888888899
Q ss_pred CCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeee
Q 042634 112 SNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNF 153 (427)
Q Consensus 112 ~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~ 153 (427)
.+++++++|+.|++++|...+.+|..+ .+++|+.|++++|.
T Consensus 796 ~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~ 836 (1153)
T PLN03210 796 SSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCS 836 (1153)
T ss_pred hhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCC
Confidence 999999999999999975445788765 56666666666543
No 449
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.42 E-value=5.1e-13 Score=138.35 Aligned_cols=122 Identities=21% Similarity=0.272 Sum_probs=106.0
Q ss_pred CCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccccCCceeeC-------CCC
Q 042634 199 NDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLD-------GEL 271 (427)
Q Consensus 199 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~-------~~~ 271 (427)
.+..++|+||.+.|+|.+++... +.+++..+..++.|++.-+++|| ..+|||+||||+|.||. ...
T Consensus 766 ~~~S~lv~ey~~~Gtlld~~N~~----~~m~e~lv~~~~~qml~ive~lH---~~~IIHgDiKPDNfll~~~~~~~~~~~ 838 (974)
T KOG1166|consen 766 QNASVLVSEYSPYGTLLDLINTN----KVMDEYLVMFFSCQMLRIVEHLH---AMGIIHGDIKPDNFLLRREICADSDSK 838 (974)
T ss_pred CCcceeeeeccccccHHHhhccC----CCCCchhhhHHHHHHHHHHHHHH---hcceecccCCcceeEeecccCCCCccc
Confidence 34568999999999999999844 56999999999999999999999 99999999999999993 235
Q ss_pred ceEecccccccccC---Cc-----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCC
Q 042634 272 TAHVGDFGLAKFLP---EA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 272 ~~kL~DFG~a~~~~---~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~p 327 (427)
-++|+|||.|..+. .+ ..+|-.+-.+|+..+.+|++.+|.|.++.+++-|+.|+..
T Consensus 839 ~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 839 GLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred ceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 69999999997542 22 2566778899999999999999999999999999999864
No 450
>PLN03150 hypothetical protein; Provisional
Probab=99.42 E-value=2.1e-13 Score=139.78 Aligned_cols=110 Identities=29% Similarity=0.510 Sum_probs=101.6
Q ss_pred cCCEeeeccccCcccCCcCccCCCCCCeEEccCccCcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEEC
Q 042634 46 LLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNLTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDI 125 (427)
Q Consensus 46 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l 125 (427)
.++.|+|++|.++|.+|..++.+++|++|+|++|.++|.+|..+..+.+| +.|+|++|+++|.+|..+++|++|+.|+|
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L-~~LdLs~N~lsg~iP~~l~~L~~L~~L~L 497 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSL-EVLDLSYNSFNGSIPESLGQLTSLRILNL 497 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCC-CEEECCCCCCCCCCchHHhcCCCCCEEEC
Confidence 48899999999999999999999999999999999999999999999999 68999999999999999999999999999
Q ss_pred cCCcccccCCcccccc-ccccceeeeeeeccc
Q 042634 126 SENKLSGQIPSSIGSC-IRLEQLVMNGNFFRG 156 (427)
Q Consensus 126 ~~n~~~~~~p~~~~~~-~~l~~l~l~~n~l~~ 156 (427)
++|.++|.+|..++.. .++..+++++|....
T Consensus 498 s~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc 529 (623)
T PLN03150 498 NGNSLSGRVPAALGGRLLHRASFNFTDNAGLC 529 (623)
T ss_pred cCCcccccCChHHhhccccCceEEecCCcccc
Confidence 9999999999998764 466788888886543
No 451
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.40 E-value=1e-14 Score=138.32 Aligned_cols=179 Identities=23% Similarity=0.305 Sum_probs=138.9
Q ss_pred CeeecCCccccc----CCccccCCCCCCEeeeeccccee------ecCcchhccccCCEeeeccccCcccCCcCccCCCC
Q 042634 1 AFTLVGNQFTGR----IPGSIGDLHKLQRLTLEMNKFWG------EIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQN 70 (427)
Q Consensus 1 ~l~l~~n~l~~~----~p~~~~~l~~L~~L~l~~n~~~~------~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~ 70 (427)
+|+++++.+++. ++..+...++|+.|+++.|.+.+ .++..+..+++|+.|++++|.+.+..+..+..+.+
T Consensus 27 ~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~ 106 (319)
T cd00116 27 VLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLR 106 (319)
T ss_pred EEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhc
Confidence 378999998543 56677888899999999998862 34557788999999999999998777777777666
Q ss_pred ---CCeEEccCccCcc----cCCCCcccc-ccccceeeccCCcCcC----CCCCCCcCCCCCCeEECcCCccccc----C
Q 042634 71 ---LILLDLSNNNLTG----TTPTEVIGL-SSLSIYLDLSQNQLNG----PLPSNFGILKNLGAIDISENKLSGQ----I 134 (427)
Q Consensus 71 ---L~~l~l~~N~~~~----~~p~~~~~l-~~l~~~L~l~~n~~~~----~~p~~~~~l~~L~~l~l~~n~~~~~----~ 134 (427)
|++|++++|++++ .+...+..+ .+| +.|++++|.+++ .++..+..++.|+.|++++|.+++. +
T Consensus 107 ~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L-~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l 185 (319)
T cd00116 107 SSSLQELKLNNNGLGDRGLRLLAKGLKDLPPAL-EKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRAL 185 (319)
T ss_pred cCcccEEEeeCCccchHHHHHHHHHHHhCCCCc-eEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHH
Confidence 9999999999973 222334455 677 679999999984 2344567788999999999999853 3
Q ss_pred CccccccccccceeeeeeeccccC----CCCcccccCCceeeccCCcccc
Q 042634 135 PSSIGSCIRLEQLVMNGNFFRGNI----PSSLSSLRGIENLDLSRNNFIR 180 (427)
Q Consensus 135 p~~~~~~~~l~~l~l~~n~l~~~~----p~~l~~l~~L~~L~L~~N~ll~ 180 (427)
+..+..+++|+.|++++|.+++.. +..+..+++|+.|++++|.+.+
T Consensus 186 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~ 235 (319)
T cd00116 186 AEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTD 235 (319)
T ss_pred HHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCch
Confidence 344556679999999999987443 3445678899999999998753
No 452
>PRK10345 hypothetical protein; Provisional
Probab=99.39 E-value=2.4e-13 Score=119.71 Aligned_cols=92 Identities=18% Similarity=0.175 Sum_probs=68.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeee--ecCCCcccccccchhhhhccCHHHHHHHHHHHHHHH-HHHhhcCCCCe
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEF--MVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASAL-DYLHHYCETPI 255 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~--~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L-~~LH~~~~~~i 255 (427)
..||||+++++.+..-. ..+....+|+|| +.+|+|.+++.+. .+++. ..++.|++.++ +||| +++|
T Consensus 58 ~~h~nIvr~yg~~et~~-g~g~v~~~I~e~~G~~~~tL~~~l~~~-----~~~e~--~~~~~~~L~~l~~yLh---~~~I 126 (210)
T PRK10345 58 IDWSGIPRYYGTVETDC-GTGYVYDVIADFDGKPSITLTEFAEQC-----RYEED--VAQLRQLLKKLKRYLL---DNRI 126 (210)
T ss_pred CCCcccceeeEEEEeCC-CCeEEEEEEecCCCCcchhHHHHHHcc-----cccHh--HHHHHHHHHHHHHHHH---HCCE
Confidence 46999999999864411 111223478999 5579999999653 25554 35678888777 9999 8999
Q ss_pred eeccccCCceeeCC----CCceEecccccc
Q 042634 256 VHCDLKPSNVLLDG----ELTAHVGDFGLA 281 (427)
Q Consensus 256 vHrDlkp~NIll~~----~~~~kL~DFG~a 281 (427)
+||||||+|||++. +..++|+||+.+
T Consensus 127 vhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 127 VTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred eecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 99999999999974 348999995444
No 453
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.31 E-value=1.2e-12 Score=128.00 Aligned_cols=174 Identities=33% Similarity=0.483 Sum_probs=148.7
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccc-cCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLT-LLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~-~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
+++++|.+... +..+..++.++.|++.+|.++ .+|+..+.++ +|+.|++++|.+. .+|..+..+++|+.|++++|+
T Consensus 98 l~~~~~~~~~~-~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~ 174 (394)
T COG4886 98 LDLNLNRLRSN-ISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFND 174 (394)
T ss_pred eeccccccccC-chhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCch
Confidence 56777777533 556777899999999999998 8999888885 9999999999999 998899999999999999999
Q ss_pred CcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCC
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPS 160 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~ 160 (427)
++ .+|...+.+.+| ..|++++|+++ .+|..+..+..|+.|.+++|++. .++..+..+.++..+.+++|++.. ++.
T Consensus 175 l~-~l~~~~~~~~~L-~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~-~~~ 249 (394)
T COG4886 175 LS-DLPKLLSNLSNL-NNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLED-LPE 249 (394)
T ss_pred hh-hhhhhhhhhhhh-hheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeee-ccc
Confidence 98 777655577788 57999999998 88888877888999999999755 688889999999999999999884 367
Q ss_pred CcccccCCceeeccCCccccccc
Q 042634 161 SLSSLRGIENLDLSRNNFIRHRN 183 (427)
Q Consensus 161 ~l~~l~~L~~L~L~~N~ll~Hpn 183 (427)
.++.+.+++.|++++|.+..-+.
T Consensus 250 ~~~~l~~l~~L~~s~n~i~~i~~ 272 (394)
T COG4886 250 SIGNLSNLETLDLSNNQISSISS 272 (394)
T ss_pred hhccccccceecccccccccccc
Confidence 78889999999999998866554
No 454
>smart00090 RIO RIO-like kinase.
Probab=99.28 E-value=5.2e-12 Score=113.91 Aligned_cols=76 Identities=20% Similarity=0.198 Sum_probs=63.9
Q ss_pred cceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCC-eeeccccCCceeeCCCCceEeccccc
Q 042634 202 EALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETP-IVHCDLKPSNVLLDGELTAHVGDFGL 280 (427)
Q Consensus 202 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~-ivHrDlkp~NIll~~~~~~kL~DFG~ 280 (427)
.++||||++++++....... ..+....+..++.|++.++++|| ..| |+||||||+||+++ ++.++|+|||.
T Consensus 123 ~~lV~E~~~g~~L~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH---~~g~iiH~Dikp~NIli~-~~~i~LiDFg~ 194 (237)
T smart00090 123 NVLVMEFIGGDGLPAPRLKD----VEPEEEEEFELYDDILEEMRKLY---KEGELVHGDLSEYNILVH-DGKVVIIDVSQ 194 (237)
T ss_pred ceEEEEEecCCccccccccc----CCcchHHHHHHHHHHHHHHHHHH---hcCCEEeCCCChhhEEEE-CCCEEEEEChh
Confidence 48999999888887665322 23556667899999999999999 889 99999999999999 88999999999
Q ss_pred ccccC
Q 042634 281 AKFLP 285 (427)
Q Consensus 281 a~~~~ 285 (427)
|....
T Consensus 195 a~~~~ 199 (237)
T smart00090 195 SVELD 199 (237)
T ss_pred hhccC
Confidence 87543
No 455
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.27 E-value=2.7e-13 Score=120.15 Aligned_cols=140 Identities=28% Similarity=0.343 Sum_probs=114.3
Q ss_pred cccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccCcccCCCCc
Q 042634 10 TGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNLTGTTPTEV 89 (427)
Q Consensus 10 ~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~ 89 (427)
+|..-..+-....|+.||||+|.|+ .+..+..-++.++.|++|+|.+. ++-. +..+++|+.||||+|.++ .+..+-
T Consensus 273 ~G~~~~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~n-La~L~~L~~LDLS~N~Ls-~~~Gwh 348 (490)
T KOG1259|consen 273 NGSALVSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQN-LAELPQLQLLDLSGNLLA-ECVGWH 348 (490)
T ss_pred CCceEEecchHhhhhhccccccchh-hhhhhhhhccceeEEecccccee-eehh-hhhcccceEeecccchhH-hhhhhH
Confidence 4444455666678999999999998 88888989999999999999999 6654 888999999999999998 676777
Q ss_pred cccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCC--ccccccccccceeeeeeecccc
Q 042634 90 IGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIP--SSIGSCIRLEQLVMNGNFFRGN 157 (427)
Q Consensus 90 ~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p--~~~~~~~~l~~l~l~~n~l~~~ 157 (427)
..+.+. ..|.|++|.+. . -+.+.+|-+|..||+++|++. .+- ..||+++-|..+.|.+|.+++.
T Consensus 349 ~KLGNI-KtL~La~N~iE-~-LSGL~KLYSLvnLDl~~N~Ie-~ldeV~~IG~LPCLE~l~L~~NPl~~~ 414 (490)
T KOG1259|consen 349 LKLGNI-KTLKLAQNKIE-T-LSGLRKLYSLVNLDLSSNQIE-ELDEVNHIGNLPCLETLRLTGNPLAGS 414 (490)
T ss_pred hhhcCE-eeeehhhhhHh-h-hhhhHhhhhheeccccccchh-hHHHhcccccccHHHHHhhcCCCcccc
Confidence 778888 67999999985 2 245677888999999999987 333 3688888888888888888753
No 456
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.26 E-value=3.7e-12 Score=107.99 Aligned_cols=124 Identities=26% Similarity=0.330 Sum_probs=41.3
Q ss_pred ccCCCCCCEeeeecccceeecCcchh-ccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccCcccCCCCc-ccccc
Q 042634 17 IGDLHKLQRLTLEMNKFWGEIPSSIG-NLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNLTGTTPTEV-IGLSS 94 (427)
Q Consensus 17 ~~~l~~L~~L~l~~n~~~~~~p~~~~-~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~-~~l~~ 94 (427)
+.+...++.|+|++|.|+ .+ ..++ .+++|+.||||+|.++ .++ .+..++.|++|++++|+++ .++..+ ..+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~-~I-e~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIS-TI-ENLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT
T ss_pred cccccccccccccccccc-cc-cchhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCC-ccccchHHhCCc
Confidence 345556788888888887 45 3466 5778888888888888 664 5667778888888888887 444333 24667
Q ss_pred ccceeeccCCcCcCCCC--CCCcCCCCCCeEECcCCcccccCCc----ccccccccccee
Q 042634 95 LSIYLDLSQNQLNGPLP--SNFGILKNLGAIDISENKLSGQIPS----SIGSCIRLEQLV 148 (427)
Q Consensus 95 l~~~L~l~~n~~~~~~p--~~~~~l~~L~~l~l~~n~~~~~~p~----~~~~~~~l~~l~ 148 (427)
| ++|++++|++.. +. ..++.+++|+.|++.+|.++ .-+. .+..+++|+.||
T Consensus 90 L-~~L~L~~N~I~~-l~~l~~L~~l~~L~~L~L~~NPv~-~~~~YR~~vi~~lP~Lk~LD 146 (175)
T PF14580_consen 90 L-QELYLSNNKISD-LNELEPLSSLPKLRVLSLEGNPVC-EKKNYRLFVIYKLPSLKVLD 146 (175)
T ss_dssp ---EEE-TTS---S-CCCCGGGGG-TT--EEE-TT-GGG-GSTTHHHHHHHH-TT-SEET
T ss_pred C-CEEECcCCcCCC-hHHhHHHHcCCCcceeeccCCccc-chhhHHHHHHHHcChhheeC
Confidence 7 567777777752 21 34556677777777777776 3333 245566666655
No 457
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.26 E-value=2.4e-12 Score=109.13 Aligned_cols=118 Identities=30% Similarity=0.368 Sum_probs=53.1
Q ss_pred CeeecCCcccccCCcccc-CCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCcc-CCCCCCeEEccC
Q 042634 1 AFTLVGNQFTGRIPGSIG-DLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLG-KCQNLILLDLSN 78 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~-~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~-~l~~L~~l~l~~ 78 (427)
+|+|+||.++ .+. .++ .+.+|+.|+||+|.++ .++ .+..++.|+.|++++|+++ .+++.+. .+++|++|++++
T Consensus 23 ~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L~L~~ 97 (175)
T PF14580_consen 23 ELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQELYLSN 97 (175)
T ss_dssp ---------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT--EEE-TT
T ss_pred cccccccccc-ccc-chhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCC-ccccchHHhCCcCCEEECcC
Confidence 4899999999 555 466 5899999999999998 675 5999999999999999999 7766554 589999999999
Q ss_pred ccCcccCC-CCccccccccceeeccCCcCcCCCCC----CCcCCCCCCeEEC
Q 042634 79 NNLTGTTP-TEVIGLSSLSIYLDLSQNQLNGPLPS----NFGILKNLGAIDI 125 (427)
Q Consensus 79 N~~~~~~p-~~~~~l~~l~~~L~l~~n~~~~~~p~----~~~~l~~L~~l~l 125 (427)
|++...-. ..+..+++| ..|+|.+|+++. .+. -+..+++|+.||-
T Consensus 98 N~I~~l~~l~~L~~l~~L-~~L~L~~NPv~~-~~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 98 NKISDLNELEPLSSLPKL-RVLSLEGNPVCE-KKNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp S---SCCCCGGGGG-TT---EEE-TT-GGGG-STTHHHHHHHH-TT-SEETT
T ss_pred CcCCChHHhHHHHcCCCc-ceeeccCCcccc-hhhHHHHHHHHcChhheeCC
Confidence 99974322 346678888 689999999983 343 2677899999874
No 458
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.25 E-value=2e-13 Score=125.09 Aligned_cols=175 Identities=25% Similarity=0.327 Sum_probs=147.3
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeec-ccceeecCc-chhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCc
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEM-NKFWGEIPS-SIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNN 79 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~-n~~~~~~p~-~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 79 (427)
||||.|+|+-.-|+.|.+|.+|..|-+.+ |+|+ .+|+ .|++|.+|+.|.+.-|.+.-.....+.++++|..|.+..|
T Consensus 96 LdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~-~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn 174 (498)
T KOG4237|consen 96 LDLSKNNISFIAPDAFKGLASLLSLVLYGNNKIT-DLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDN 174 (498)
T ss_pred ecccccchhhcChHhhhhhHhhhHHHhhcCCchh-hhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccch
Confidence 79999999988899999999988887777 9998 7885 6899999999999999999555567999999999999999
Q ss_pred cCcccCCC-CccccccccceeeccCCcCc---------------------------------------------------
Q 042634 80 NLTGTTPT-EVIGLSSLSIYLDLSQNQLN--------------------------------------------------- 107 (427)
Q Consensus 80 ~~~~~~p~-~~~~l~~l~~~L~l~~n~~~--------------------------------------------------- 107 (427)
.+. .++. .+..+.++ +.+++..|++-
T Consensus 175 ~~q-~i~~~tf~~l~~i-~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~ 252 (498)
T KOG4237|consen 175 KIQ-SICKGTFQGLAAI-KTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLP 252 (498)
T ss_pred hhh-hhccccccchhcc-chHhhhcCccccccccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHH
Confidence 998 5665 67777777 56777777730
Q ss_pred ----------CCCC-CCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCCCcccccCCceeeccCC
Q 042634 108 ----------GPLP-SNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRN 176 (427)
Q Consensus 108 ----------~~~p-~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N 176 (427)
+.-| ..|..|++|+.|+|++|++++.-+.+|.+.++++.|.|..|++...-...|.++.+|..|+|++|
T Consensus 253 s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N 332 (498)
T KOG4237|consen 253 SRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDN 332 (498)
T ss_pred HhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCC
Confidence 0001 12677889999999999999777789999999999999999998665667889999999999999
Q ss_pred ccc
Q 042634 177 NFI 179 (427)
Q Consensus 177 ~ll 179 (427)
++.
T Consensus 333 ~it 335 (498)
T KOG4237|consen 333 QIT 335 (498)
T ss_pred eeE
Confidence 874
No 459
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.17 E-value=3.7e-12 Score=113.00 Aligned_cols=127 Identities=31% Similarity=0.404 Sum_probs=111.3
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
.+|||+|.++ .+..++.-++.++.|++|+|.+. .+-. +..|++|+.||||+|.++ .+-.+=..+-+.+.|.|++|.
T Consensus 288 elDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~n-La~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La~N~ 363 (490)
T KOG1259|consen 288 ELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQN-LAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLAQNK 363 (490)
T ss_pred hccccccchh-hhhhhhhhccceeEEecccccee-eehh-hhhcccceEeecccchhH-hhhhhHhhhcCEeeeehhhhh
Confidence 3799999999 89999999999999999999998 6755 999999999999999999 877777778899999999999
Q ss_pred CcccCCCCccccccccceeeccCCcCcCCCC--CCCcCCCCCCeEECcCCcccccCCc
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLNGPLP--SNFGILKNLGAIDISENKLSGQIPS 136 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p--~~~~~l~~L~~l~l~~n~~~~~~p~ 136 (427)
+. .+ .++..+.+| ..||+.+|++. .+- ..+++|+-|+++.|.+|.+.+ +|+
T Consensus 364 iE-~L-SGL~KLYSL-vnLDl~~N~Ie-~ldeV~~IG~LPCLE~l~L~~NPl~~-~vd 416 (490)
T KOG1259|consen 364 IE-TL-SGLRKLYSL-VNLDLSSNQIE-ELDEVNHIGNLPCLETLRLTGNPLAG-SVD 416 (490)
T ss_pred Hh-hh-hhhHhhhhh-eeccccccchh-hHHHhcccccccHHHHHhhcCCCccc-cch
Confidence 97 33 367788888 78999999996 332 578999999999999999994 554
No 460
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.16 E-value=2.4e-11 Score=107.01 Aligned_cols=69 Identities=26% Similarity=0.481 Sum_probs=60.2
Q ss_pred CccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccccCCceeeCCCCceEecccc
Q 042634 200 DSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFG 279 (427)
Q Consensus 200 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG 279 (427)
...+++|||++|++|.+++.... . .++.|++.+|.++| ..|++|||++|+||+++ ++.++++|||
T Consensus 70 ~~~~lv~e~~~g~~l~~~~~~~~-----~------~~~~~i~~~l~~lH---~~gi~H~Dl~~~Nil~~-~~~~~liDfg 134 (199)
T TIGR03724 70 DNKTIVMEYIEGKPLKDVIEEGN-----D------ELLREIGRLVGKLH---KAGIVHGDLTTSNIIVR-DDKLYLIDFG 134 (199)
T ss_pred CCCEEEEEEECCccHHHHHhhcH-----H------HHHHHHHHHHHHHH---HCCeecCCCCcceEEEE-CCcEEEEECC
Confidence 35689999999999988764321 0 78999999999999 89999999999999999 7899999999
Q ss_pred cccc
Q 042634 280 LAKF 283 (427)
Q Consensus 280 ~a~~ 283 (427)
.++.
T Consensus 135 ~a~~ 138 (199)
T TIGR03724 135 LGKY 138 (199)
T ss_pred CCcC
Confidence 9875
No 461
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.15 E-value=4.7e-11 Score=105.14 Aligned_cols=73 Identities=16% Similarity=0.120 Sum_probs=61.9
Q ss_pred ccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccccCCceeeCCCCceEeccccc
Q 042634 201 SEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGL 280 (427)
Q Consensus 201 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~ 280 (427)
..++||||+++++|...... .....++.+++.++.++| ..||+||||||+||++++++.++|+|||.
T Consensus 105 ~~~lv~e~~~g~~L~~~~~~----------~~~~~~~~~i~~~l~~lh---~~gi~H~Dl~p~Nill~~~~~~~liDfg~ 171 (198)
T cd05144 105 RHAVVMEYIDGVELYRVRVL----------EDPEEVLDEILEEIVKAY---KHGIIHGDLSEFNILVDDDEKIYIIDWPQ 171 (198)
T ss_pred CceEEEEEeCCcchhhcccc----------ccHHHHHHHHHHHHHHHH---HCCCCcCCCCcccEEEcCCCcEEEEECCc
Confidence 45899999999998765431 234578899999999999 89999999999999999999999999999
Q ss_pred ccccCC
Q 042634 281 AKFLPE 286 (427)
Q Consensus 281 a~~~~~ 286 (427)
+.....
T Consensus 172 ~~~~~~ 177 (198)
T cd05144 172 MVSTDH 177 (198)
T ss_pred cccCCC
Confidence 965543
No 462
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.15 E-value=2.6e-11 Score=123.01 Aligned_cols=85 Identities=24% Similarity=0.352 Sum_probs=67.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|++++.....+. .....++||||+++++|.+++. ....++.|++++|.||| ..|++||
T Consensus 393 l~~~~i~~p~~~~~-----~~~~~~lv~E~~~g~~L~~~l~------------~~~~~~~~i~~~L~~lH---~~giiHr 452 (535)
T PRK09605 393 ARRAGVPTPVIYDV-----DPEEKTIVMEYIGGKDLKDVLE------------GNPELVRKVGEIVAKLH---KAGIVHG 452 (535)
T ss_pred hcccCCCeeEEEEE-----eCCCCEEEEEecCCCcHHHHHH------------HHHHHHHHHHHHHHHHH---hCCCccC
Confidence 45666654433221 1345689999999999987763 34678999999999999 8999999
Q ss_pred cccCCceeeCCCCceEeccccccccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFL 284 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~ 284 (427)
|+||+||++ .++.++|+|||+|+..
T Consensus 453 Dlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 453 DLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred CCChHHEEE-ECCcEEEEeCcccccC
Confidence 999999999 6778999999999753
No 463
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.15 E-value=3.5e-11 Score=107.06 Aligned_cols=72 Identities=28% Similarity=0.519 Sum_probs=63.2
Q ss_pred CccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccccCCceeeCCCCceEecccc
Q 042634 200 DSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFG 279 (427)
Q Consensus 200 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG 279 (427)
...+++|||++|++|.+++... .. .+..++.+++.+|.++| ..|++|||++|.||+++ ++.++|+|||
T Consensus 72 ~~~~lv~e~~~G~~L~~~~~~~-------~~-~~~~i~~~i~~~l~~lH---~~~i~H~Dl~p~Nil~~-~~~~~liDf~ 139 (211)
T PRK14879 72 ENFIIVMEYIEGEPLKDLINSN-------GM-EELELSREIGRLVGKLH---SAGIIHGDLTTSNMILS-GGKIYLIDFG 139 (211)
T ss_pred CCCEEEEEEeCCcCHHHHHHhc-------cH-HHHHHHHHHHHHHHHHH---hCCcccCCCCcccEEEE-CCCEEEEECC
Confidence 4568999999999998887532 12 78889999999999999 89999999999999999 7889999999
Q ss_pred cccc
Q 042634 280 LAKF 283 (427)
Q Consensus 280 ~a~~ 283 (427)
.++.
T Consensus 140 ~a~~ 143 (211)
T PRK14879 140 LAEF 143 (211)
T ss_pred cccC
Confidence 8864
No 464
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.12 E-value=5.9e-11 Score=107.24 Aligned_cols=71 Identities=20% Similarity=0.256 Sum_probs=59.5
Q ss_pred cceeeeeecC-CCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccccCCceeeCCCCceEeccccc
Q 042634 202 EALVYEFMVN-GSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGL 280 (427)
Q Consensus 202 ~~lv~e~~~~-g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~ 280 (427)
.++|||++++ .+|.+++... .++.. .+.|++.++.+|| ..||+||||||+|||++.++.++|+|||.
T Consensus 121 ~~lV~e~l~G~~~L~~~l~~~-----~l~~~----~~~~i~~~l~~lH---~~GI~HrDlkp~NILv~~~~~v~LIDfg~ 188 (239)
T PRK01723 121 ADILIERIEGARDLVALLQEA-----PLSEE----QWQAIGQLIARFH---DAGVYHADLNAHNILLDPDGKFWLIDFDR 188 (239)
T ss_pred eeEEEEecCCCCCHHHHHhcC-----CCCHH----HHHHHHHHHHHHH---HCCCCCCCCCchhEEEcCCCCEEEEECCC
Confidence 3599999987 6888887542 24433 3678999999999 99999999999999999888999999999
Q ss_pred cccc
Q 042634 281 AKFL 284 (427)
Q Consensus 281 a~~~ 284 (427)
++..
T Consensus 189 ~~~~ 192 (239)
T PRK01723 189 GELR 192 (239)
T ss_pred cccC
Confidence 8764
No 465
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.10 E-value=5.9e-11 Score=121.43 Aligned_cols=139 Identities=25% Similarity=0.315 Sum_probs=112.0
Q ss_pred cccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccc
Q 042634 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDL 260 (427)
Q Consensus 181 Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDl 260 (427)
+|-+++.... +......+++++|..+++|...++... ..+..-.+.....+.++.+||| ...+.|||+
T Consensus 863 ~P~v~~~~~s-----~~~rsP~~L~~~~~~~~~~~Skl~~~~----~~saepaRs~i~~~vqs~e~L~---s~~r~h~~~ 930 (1205)
T KOG0606|consen 863 SPAVVRSFPS-----FPCRSPLPLVGHYLNGGDLPSKLHNSG----CLSAEPARSPILERVQSLESLH---SSLRKHRDL 930 (1205)
T ss_pred CCceecccCC-----CCCCCCcchhhHHhccCCchhhhhcCC----CcccccccchhHHHHhhhhccc---cchhhcccc
Confidence 4555554433 334567899999999999999988654 2555566777888889999999 777999999
Q ss_pred cCCceeeCCCCceEecccccccccCC-------------------------------------cCCCccccccccccCCC
Q 042634 261 KPSNVLLDGELTAHVGDFGLAKFLPE-------------------------------------ATNNFFNFQIAEYGMGS 303 (427)
Q Consensus 261 kp~NIll~~~~~~kL~DFG~a~~~~~-------------------------------------~~~~~~~y~aPE~~~~~ 303 (427)
+|.|+++..++..++.|||......- ...+|+.|.+||...+.
T Consensus 931 ~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~ 1010 (1205)
T KOG0606|consen 931 KPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGR 1010 (1205)
T ss_pred cccchhhcccCCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccc
Confidence 99999999999999999984432100 01578889999999999
Q ss_pred CcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 304 EVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 304 ~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
....++|+|++|++++|.++|.+||...
T Consensus 1011 ~hgs~ad~~~~g~~l~e~l~g~pp~na~ 1038 (1205)
T KOG0606|consen 1011 RHGSAADWWSSGVCLFEVLTGIPPFNAE 1038 (1205)
T ss_pred cCCCcchhhhhhhhhhhhhcCCCCCCCc
Confidence 9999999999999999999999999764
No 466
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.06 E-value=2e-10 Score=111.67 Aligned_cols=152 Identities=24% Similarity=0.328 Sum_probs=120.2
Q ss_pred ccCCceeeccCCcccccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHH--
Q 042634 165 LRGIENLDLSRNNFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVAS-- 242 (427)
Q Consensus 165 l~~L~~L~L~~N~ll~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~-- 242 (427)
+..++.+ .+.-++-.|++.++.... +.+....++-+|+| +.+|.++.+... ..++....+....+..+
T Consensus 162 ~~k~~~~-~s~~~i~~~~~~v~~~~~-----~e~~~~lfiqtE~~-~~sl~~~~~~~~---~~~p~~~l~~~~~~~~~~~ 231 (524)
T KOG0601|consen 162 KRKLREF-LSHHKIDSHENPVRDSPA-----WEGSGILFIQTELC-GESLQSYCHTPC---NFLPDNLLWNSLRDWLSRD 231 (524)
T ss_pred ccccchh-hcccccCccccccccCcc-----cccCCcceeeeccc-cchhHHhhhccc---ccCCchhhhhHHhhhhhcc
Confidence 3344443 344555678888886555 45577888999988 688888876543 33777888888888888
Q ss_pred --HHHHHhhcCCCCeeeccccCCceeeCCC-CceEecccccccccCCcC-----------CCccccccccccCCCCcCcc
Q 042634 243 --ALDYLHHYCETPIVHCDLKPSNVLLDGE-LTAHVGDFGLAKFLPEAT-----------NNFFNFQIAEYGMGSEVSTS 308 (427)
Q Consensus 243 --~L~~LH~~~~~~ivHrDlkp~NIll~~~-~~~kL~DFG~a~~~~~~~-----------~~~~~y~aPE~~~~~~~~~~ 308 (427)
|+.++| ..+++|-|+||.||+...+ ...+++|||+...+.... .+...|++||... .-++.+
T Consensus 232 ~~al~~~h---s~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~ 307 (524)
T KOG0601|consen 232 VTALSHLH---SNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFA 307 (524)
T ss_pred cccccccC---CCcccccccchhheecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhc-cccchH
Confidence 999999 9999999999999999999 889999999998775543 4556799999854 456889
Q ss_pred ccchhHHHHHHHHHhCCCCCCc
Q 042634 309 GDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 309 ~DiwS~G~vl~ell~g~~pf~~ 330 (427)
.||||+|.|..+...+..++..
T Consensus 308 ~di~sl~ev~l~~~l~~~~~~~ 329 (524)
T KOG0601|consen 308 SDIFSLGEVILEAILGSHLPSV 329 (524)
T ss_pred hhhcchhhhhHhhHhhcccccC
Confidence 9999999999999998876543
No 467
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=99.01 E-value=3.4e-10 Score=79.05 Aligned_cols=60 Identities=45% Similarity=0.572 Sum_probs=48.7
Q ss_pred CCCCEeeeecccceeecC-cchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccC
Q 042634 21 HKLQRLTLEMNKFWGEIP-SSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNL 81 (427)
Q Consensus 21 ~~L~~L~l~~n~~~~~~p-~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~ 81 (427)
++|++|++++|+++ .+| ..|.++++|++|++++|.++...|..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~-~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLT-EIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTES-EECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCC-ccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 47888899988888 455 5778889999999999988855556788888888888888875
No 468
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.01 E-value=4.2e-10 Score=98.04 Aligned_cols=75 Identities=24% Similarity=0.246 Sum_probs=59.7
Q ss_pred ccceeeeeecCCCcccc-cccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCC-CCeeeccccCCceeeCCCCceEeccc
Q 042634 201 SEALVYEFMVNGSLEEW-LHPNREALKNLNLLQRLSIAVDVASALDYLHHYCE-TPIVHCDLKPSNVLLDGELTAHVGDF 278 (427)
Q Consensus 201 ~~~lv~e~~~~g~L~~~-l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~-~~ivHrDlkp~NIll~~~~~~kL~DF 278 (427)
..++||||++++++... +.... . ...+..++.+++.++.++| . .||+||||||+||+++ ++.++|+||
T Consensus 89 ~~~lv~e~~~g~~~~~~~l~~~~-----~-~~~~~~~~~~~~~~l~~lh---~~~~ivH~Dl~p~Nili~-~~~~~liDf 158 (187)
T cd05119 89 RHVLVMEFIGGDGIPAPRLKDVR-----L-LEDPEELYDQILELMRKLY---REAGLVHGDLSEYNILVD-DGKVYIIDV 158 (187)
T ss_pred CCEEEEEEeCCCCccChhhhhhh-----h-cccHHHHHHHHHHHHHHHh---hccCcCcCCCChhhEEEE-CCcEEEEEC
Confidence 35899999988654322 21110 1 1567889999999999999 7 9999999999999999 899999999
Q ss_pred ccccccC
Q 042634 279 GLAKFLP 285 (427)
Q Consensus 279 G~a~~~~ 285 (427)
|.|....
T Consensus 159 g~a~~~~ 165 (187)
T cd05119 159 PQAVEID 165 (187)
T ss_pred ccccccc
Confidence 9997543
No 469
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=98.99 E-value=6.1e-10 Score=92.97 Aligned_cols=73 Identities=26% Similarity=0.343 Sum_probs=61.0
Q ss_pred CccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccccCCceeeCCCCceEecccc
Q 042634 200 DSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFG 279 (427)
Q Consensus 200 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG 279 (427)
...+++|||+.++.+..+ +......++.+++++++++|.....+++|+|++|+||+++..+.++++|||
T Consensus 66 ~~~~~v~e~~~g~~~~~~-----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~ 134 (155)
T cd05120 66 GWSYLLMEWIEGETLDEV-----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWE 134 (155)
T ss_pred CccEEEEEecCCeecccC-----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecc
Confidence 567999999988777654 334567789999999999995333589999999999999998999999999
Q ss_pred cccc
Q 042634 280 LAKF 283 (427)
Q Consensus 280 ~a~~ 283 (427)
.++.
T Consensus 135 ~~~~ 138 (155)
T cd05120 135 YAGY 138 (155)
T ss_pred cccC
Confidence 8864
No 470
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.96 E-value=8.7e-09 Score=96.23 Aligned_cols=181 Identities=19% Similarity=0.187 Sum_probs=123.0
Q ss_pred hccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccccCCceeeCCCCceEecccccccccCC-----cCCCcccccccccc
Q 042634 226 KNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPE-----ATNNFFNFQIAEYG 300 (427)
Q Consensus 226 ~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~~y~aPE~~ 300 (427)
....|...++.++.++.+..-|| ..|.+-+|+.++|+|+.+++.+.|.|-..-..... ..+|...|.+||.-
T Consensus 112 P~~~w~fllrvaRnlA~aFA~lH---~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~ng~~~~cpVg~~eftPPElQ 188 (637)
T COG4248 112 PHCAWDFLLRVARNLASAFATLH---EHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQINANGTLHLCPVGVSEFTPPELQ 188 (637)
T ss_pred CccccHHHHHHHHHHHHHHHHHH---hcCCcccccCccceeeecCceEEEEcccceeeccCCceEecccCccccCCHHHh
Confidence 45779999999999999999999 89999999999999999999999987433222222 22778899999975
Q ss_pred C-----CCCcCccccchhHHHHHHHHHhC-CCCCCcccCCCccHHHHHHHhcccchh-cccCccccccccccchhhhccc
Q 042634 301 M-----GSEVSTSGDVYSFGILLLETFTG-KRPTNEMFTGNLTLHNFVKEALPERLA-EIVDPVLLVEREEGETSKANAH 373 (427)
Q Consensus 301 ~-----~~~~~~~~DiwS~G~vl~ell~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 373 (427)
. +..-+...|-|.+|+++++++.| ++||.+....... ++... ++.........+.+.. -
T Consensus 189 ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~a---------p~p~E~~Ia~g~f~ya~~~~~g-----~ 254 (637)
T COG4248 189 TLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDA---------PNPLETDIAHGRFAYASDQRRG-----L 254 (637)
T ss_pred ccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCC---------CCcchhhhhcceeeechhccCC-----C
Confidence 4 23346779999999999999885 9999876322110 01111 1111111111101100 0
Q ss_pred cccccccchHHHHHHHHHHHhhcCCCC--CCCCCCHHHHHHHHHHHHHHHHh
Q 042634 374 KQFTRSFSVKECLVSVLGIGVTCSSEL--PRERMNMEEVAAQLLSFRNKLVK 423 (427)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~l~~~cl~~d--P~~Rpt~~ev~~~L~~~~~~~~~ 423 (427)
++..........+..+..+..+|+... +.-|||++.-+..|.++++++.+
T Consensus 255 ~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~~ 306 (637)
T COG4248 255 KPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLKK 306 (637)
T ss_pred CCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhhh
Confidence 111112233444566778888888654 57899999999999999988764
No 471
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.89 E-value=4.6e-10 Score=110.80 Aligned_cols=144 Identities=19% Similarity=0.283 Sum_probs=100.6
Q ss_pred HHHHHHHHHHHHhhcCCCCeeeccccCCceeeCCCCceEecccccccccCCcC---------------CCcccccccccc
Q 042634 236 IAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT---------------NNFFNFQIAEYG 300 (427)
Q Consensus 236 ~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~---------------~~~~~y~aPE~~ 300 (427)
=+.+++.|+.|+|. +.++||++|.|++|.++..+..||+.|+.+....... .....|.|||++
T Consensus 104 nl~~v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~ 181 (700)
T KOG2137|consen 104 NLGNVADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYL 181 (700)
T ss_pred hhhcccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhh
Confidence 34566689999996 7899999999999999999999999999987654422 233469999999
Q ss_pred CCCCcCccccchhHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccc
Q 042634 301 MGSEVSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRS 379 (427)
Q Consensus 301 ~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (427)
.+...+.++|+||+||++|-+.. |+..+.. .+..... ...+... .... .
T Consensus 182 ~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a-~~~~~~~-~~~~~~~--~~~~--------------------------~ 231 (700)
T KOG2137|consen 182 LGTTNTPASDVFSLGVLIYTIYNGGKSIIAA-NGGLLSY-SFSRNLL--NAGA--------------------------F 231 (700)
T ss_pred ccccccccccceeeeeEEEEEecCCcchhhc-cCCcchh-hhhhccc--cccc--------------------------c
Confidence 99888999999999999999995 5544432 1111111 1111000 0000 0
Q ss_pred cchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 042634 380 FSVKECLVSVLGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 380 ~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
-...+.+.++.+=+.+++..++.-||++.++.
T Consensus 232 ~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~ 263 (700)
T KOG2137|consen 232 GYSNNLPSELRESLKKLLNGDSAVRPTLDLLL 263 (700)
T ss_pred cccccCcHHHHHHHHHHhcCCcccCcchhhhh
Confidence 01234566677788888888999999776654
No 472
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.89 E-value=1.2e-09 Score=106.39 Aligned_cols=191 Identities=19% Similarity=0.170 Sum_probs=133.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
..|.++++....+.. ....++--|||.++++..... ....+.+..++++..|++.++.++| +..++|+
T Consensus 323 ~~~~~~~g~~~~W~~-----~r~~~ip~e~~~~~s~~l~~~----~~~~~d~~~~~~~~~q~~~~l~~i~---s~~~~~~ 390 (524)
T KOG0601|consen 323 GSHLPSVGKNSSWSQ-----LRQGYIPLEFCEGGSSSLRSV----TSQMLDEDPRLRLTAQILTALNVIH---SKLFVHL 390 (524)
T ss_pred hcccccCCCCCCccc-----cccccCchhhhcCcchhhhhH----HHHhcCcchhhhhHHHHHhcccccc---chhhhcc
Confidence 347777777766443 456779999999998766552 1245788889999999999999999 9999999
Q ss_pred cccCCceeeCCC-CceEecccccccccCCc----CCCcccc-ccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGE-LTAHVGDFGLAKFLPEA----TNNFFNF-QIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~-~~~kL~DFG~a~~~~~~----~~~~~~y-~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
|+||+||++..+ +..++.|||++..+.-. ...+..| .+++......+..++|++|||..+.|..++...-...
T Consensus 391 d~~psni~i~~~~~~~~~~~~~~~t~~~~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~- 469 (524)
T KOG0601|consen 391 DVKPSNILISNDGFFSKLGDFGCWTRLAFSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESG- 469 (524)
T ss_pred cccccceeeccchhhhhccccccccccceecccccccccccccchhhccccccccccccccccccccccccCcccCccc-
Confidence 999999999876 88999999999742211 1233334 2555556677889999999999999999887532211
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
..+ ..+....+ . .......++..+...+...++..||.+.+...
T Consensus 470 ---~~~------------~~i~~~~~--------------------p-~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~ 513 (524)
T KOG0601|consen 470 ---VQS------------LTIRSGDT--------------------P-NLPGLKLQLQVLLKVMINPDRKRRPSAVELSL 513 (524)
T ss_pred ---ccc------------eeeecccc--------------------c-CCCchHHhhhhhhhhhcCCccccchhhhhhcc
Confidence 000 00000000 0 01112255677888899999999999998877
Q ss_pred HHHHHH
Q 042634 413 QLLSFR 418 (427)
Q Consensus 413 ~L~~~~ 418 (427)
+.+..+
T Consensus 514 ~~~~~~ 519 (524)
T KOG0601|consen 514 HSEFYR 519 (524)
T ss_pred cchhhh
Confidence 665543
No 473
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=98.87 E-value=1e-08 Score=101.00 Aligned_cols=132 Identities=22% Similarity=0.239 Sum_probs=97.9
Q ss_pred cccccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCee
Q 042634 177 NFIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIV 256 (427)
Q Consensus 177 ~ll~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~iv 256 (427)
+.++||+|+++++.... ....|+|+|-+. -|..++. .++...+..-+.||+.||.|||+ ..+++
T Consensus 64 KtlRHP~Il~yL~t~e~-----~~~~ylvTErV~--Pl~~~lk-------~l~~~~v~~Gl~qIl~AL~FL~~--d~~lv 127 (690)
T KOG1243|consen 64 KTLRHPNILSYLDTTEE-----EGTLYLVTERVR--PLETVLK-------ELGKEEVCLGLFQILAALSFLND--DCNLV 127 (690)
T ss_pred hhccCchhhhhhhhhcc-----cCceEEEeeccc--cHHHHHH-------HhHHHHHHHHHHHHHHHHHHHhc--cCCee
Confidence 34789999999998443 567899999773 3444443 24456677789999999999986 78999
Q ss_pred eccccCCceeeCCCCceEecccccccccCCcC------CCccccccccccCCCCcCccccchhHHHHHHHHHhCCC
Q 042634 257 HCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKR 326 (427)
Q Consensus 257 HrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~ 326 (427)
|++|.-..|+++..|..||++|-.+....... ..-..|..|+...... -..|.|-|||++||++.|..
T Consensus 128 HgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng~~ 201 (690)
T KOG1243|consen 128 HGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNGSL 201 (690)
T ss_pred eccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCccc
Confidence 99999999999999999999998875433222 1111345555432222 34699999999999999943
No 474
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.82 E-value=3.3e-09 Score=73.99 Aligned_cols=60 Identities=47% Similarity=0.634 Sum_probs=40.8
Q ss_pred ccCCEeeeccccCcccCC-cCccCCCCCCeEEccCccCcccCCCCccccccccceeeccCCcC
Q 042634 45 TLLITLNFAENMLEGSIP-SSLGKCQNLILLDLSNNNLTGTTPTEVIGLSSLSIYLDLSQNQL 106 (427)
Q Consensus 45 ~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~l~l~~N~~~~~~p~~~~~l~~l~~~L~l~~n~~ 106 (427)
++|++|++++|+++ .+| ..+..+++|++|++++|+++...|..|.++++| ++|++++|++
T Consensus 1 p~L~~L~l~~n~l~-~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L-~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLT-EIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNL-RYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTES-EECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTE-SEEEETSSSB
T ss_pred CcCcEEECCCCCCC-ccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCC-CEEeCcCCcC
Confidence 46777777777777 445 456677777777777777775555666666666 4566666654
No 475
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.82 E-value=7.4e-10 Score=108.78 Aligned_cols=144 Identities=24% Similarity=0.297 Sum_probs=96.6
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccC
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNL 81 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~ 81 (427)
++++.|.+. .+-..++.+++|+.|++..|+|. .+...+..+++|++|++++|.|+ .+. .+..++.|+.|++++|.+
T Consensus 77 l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~-~i~-~l~~l~~L~~L~l~~N~i 152 (414)
T KOG0531|consen 77 LNLRQNLIA-KILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKIT-KLE-GLSTLTLLKELNLSGNLI 152 (414)
T ss_pred hccchhhhh-hhhcccccccceeeeeccccchh-hcccchhhhhcchheeccccccc-ccc-chhhccchhhheeccCcc
Confidence 345666666 34455788888888888888888 45555788888888888888888 443 455666688888888888
Q ss_pred cccCCCCccccccccceeeccCCcCcCCCCCC-CcCCCCCCeEECcCCcccccCCccccccccccceeeeeeecc
Q 042634 82 TGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSN-FGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFR 155 (427)
Q Consensus 82 ~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~-~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~ 155 (427)
+ .++ .+..+..| ..+++++|++.. +... ...+.+++.+++.+|.+.. ...+..+..+..+++..|.++
T Consensus 153 ~-~~~-~~~~l~~L-~~l~l~~n~i~~-ie~~~~~~~~~l~~l~l~~n~i~~--i~~~~~~~~l~~~~l~~n~i~ 221 (414)
T KOG0531|consen 153 S-DIS-GLESLKSL-KLLDLSYNRIVD-IENDELSELISLEELDLGGNSIRE--IEGLDLLKKLVLLSLLDNKIS 221 (414)
T ss_pred h-hcc-CCccchhh-hcccCCcchhhh-hhhhhhhhccchHHHhccCCchhc--ccchHHHHHHHHhhcccccce
Confidence 7 443 34446677 568888888873 3332 4677788888888887762 222333333333444555444
No 476
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.76 E-value=2e-10 Score=90.61 Aligned_cols=101 Identities=26% Similarity=0.323 Sum_probs=52.6
Q ss_pred eeecCCcccccCCccccC---CCCCCEeeeecccceeecCcchh-ccccCCEeeeccccCcccCCcCccCCCCCCeEEcc
Q 042634 2 FTLVGNQFTGRIPGSIGD---LHKLQRLTLEMNKFWGEIPSSIG-NLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLS 77 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~---l~~L~~L~l~~n~~~~~~p~~~~-~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~ 77 (427)
+||++++|. .+++.... ...|+..+|++|.+. ..|+.|. ..+.++.|+|++|.++ .+|.++..++.|+.|+++
T Consensus 32 ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~ 108 (177)
T KOG4579|consen 32 LDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLR 108 (177)
T ss_pred cccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccc
Confidence 355555554 34443333 333444466666665 4554443 3345666666666666 666666666666666666
Q ss_pred CccCcccCCCCccccccccceeeccCCcCc
Q 042634 78 NNNLTGTTPTEVIGLSSLSIYLDLSQNQLN 107 (427)
Q Consensus 78 ~N~~~~~~p~~~~~l~~l~~~L~l~~n~~~ 107 (427)
.|++. ..|.-+..+.++ ..|+..+|...
T Consensus 109 ~N~l~-~~p~vi~~L~~l-~~Lds~~na~~ 136 (177)
T KOG4579|consen 109 FNPLN-AEPRVIAPLIKL-DMLDSPENARA 136 (177)
T ss_pred cCccc-cchHHHHHHHhH-HHhcCCCCccc
Confidence 66665 344444444444 34555555543
No 477
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=98.74 E-value=1.6e-08 Score=87.56 Aligned_cols=76 Identities=22% Similarity=0.192 Sum_probs=58.2
Q ss_pred ccceeeeeecCCCccc-ccccchhhhhccCHHHHHHHHHHHHHHHHHH-hhcCCCCeeeccccCCceeeCCCCceEeccc
Q 042634 201 SEALVYEFMVNGSLEE-WLHPNREALKNLNLLQRLSIAVDVASALDYL-HHYCETPIVHCDLKPSNVLLDGELTAHVGDF 278 (427)
Q Consensus 201 ~~~lv~e~~~~g~L~~-~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~L-H~~~~~~ivHrDlkp~NIll~~~~~~kL~DF 278 (427)
..++||||+.++.+.. .+++ ..++..+...+..+++.+|..+ | ..||||+|+++.||++.+ +.+.|+||
T Consensus 98 ~~~lvME~Ig~~~~~~~~Lkd-----~~~~~~~~~~i~~~i~~~l~~l~H---~~glVHGDLs~~NIL~~~-~~v~iIDF 168 (197)
T cd05146 98 KHVLVMSFIGDDQVPAPKLKD-----AKLNDEEMKNAYYQVLSMMKQLYK---ECNLVHADLSEYNMLWHD-GKVWFIDV 168 (197)
T ss_pred CCEEEEEEcCCCCccchhhhc-----cccCHHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEC-CcEEEEEC
Confidence 4589999996554422 2221 1244556677889999999998 7 889999999999999974 67999999
Q ss_pred ccccccC
Q 042634 279 GLAKFLP 285 (427)
Q Consensus 279 G~a~~~~ 285 (427)
|.|....
T Consensus 169 ~qav~~~ 175 (197)
T cd05146 169 SQSVEPT 175 (197)
T ss_pred CCceeCC
Confidence 9987654
No 478
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.74 E-value=2.2e-09 Score=100.15 Aligned_cols=161 Identities=25% Similarity=0.251 Sum_probs=122.0
Q ss_pred cccCCCCCCEeeeecccceeecC--cchhccccCCEeeeccccCcccCCcCc-cCCCCCCeEEccCccCcccCCC-Cccc
Q 042634 16 SIGDLHKLQRLTLEMNKFWGEIP--SSIGNLTLLITLNFAENMLEGSIPSSL-GKCQNLILLDLSNNNLTGTTPT-EVIG 91 (427)
Q Consensus 16 ~~~~l~~L~~L~l~~n~~~~~~p--~~~~~l~~L~~L~l~~n~l~~~~p~~~-~~l~~L~~l~l~~N~~~~~~p~-~~~~ 91 (427)
....+++++.||||.|-++..-| .-...|++|+.|+||.|++.-..-... ..+++|+.|.++.|-+++.--. .+..
T Consensus 141 ~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~ 220 (505)
T KOG3207|consen 141 YSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLT 220 (505)
T ss_pred hhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHh
Confidence 56789999999999999885433 334678999999999999983222222 2457899999999999744332 2456
Q ss_pred cccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCC--ccccccccccceeeeeeecccc-CCCC-----cc
Q 042634 92 LSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIP--SSIGSCIRLEQLVMNGNFFRGN-IPSS-----LS 163 (427)
Q Consensus 92 l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p--~~~~~~~~l~~l~l~~n~l~~~-~p~~-----l~ 163 (427)
++++ ..|+|+.|...+........++.|+.|||++|++- ..+ ..++.++.|+.|+++.+.+... .|+. ..
T Consensus 221 fPsl-~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li-~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~ 298 (505)
T KOG3207|consen 221 FPSL-EVLYLEANEIILIKATSTKILQTLQELDLSNNNLI-DFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTH 298 (505)
T ss_pred CCcH-HHhhhhcccccceecchhhhhhHHhhccccCCccc-ccccccccccccchhhhhccccCcchhcCCCccchhhhc
Confidence 7788 57999999644455666777889999999999887 566 5678999999999999988753 2332 35
Q ss_pred cccCCceeeccCCcc
Q 042634 164 SLRGIENLDLSRNNF 178 (427)
Q Consensus 164 ~l~~L~~L~L~~N~l 178 (427)
.+.+|+.|++..|++
T Consensus 299 ~f~kL~~L~i~~N~I 313 (505)
T KOG3207|consen 299 TFPKLEYLNISENNI 313 (505)
T ss_pred ccccceeeecccCcc
Confidence 678899999999988
No 479
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.70 E-value=2.2e-09 Score=105.39 Aligned_cols=151 Identities=31% Similarity=0.395 Sum_probs=106.2
Q ss_pred cCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccCcccCCCCccccccccc
Q 042634 18 GDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNLTGTTPTEVIGLSSLSI 97 (427)
Q Consensus 18 ~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~~l~~l~~ 97 (427)
..+..++.+++..|.+. .+-..+..+++|+.|++.+|++. .+...+..+++|++|++++|.|+..-+ +..+..| .
T Consensus 69 ~~l~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L-~ 143 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKLEG--LSTLTLL-K 143 (414)
T ss_pred HHhHhHHhhccchhhhh-hhhcccccccceeeeeccccchh-hcccchhhhhcchheeccccccccccc--hhhccch-h
Confidence 45677788888888887 44455888888999999999988 665557778889999999999884443 4455556 5
Q ss_pred eeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCcc-ccccccccceeeeeeeccccCCCCcccccCCceeeccCC
Q 042634 98 YLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSS-IGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRN 176 (427)
Q Consensus 98 ~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~-~~~~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N 176 (427)
.|++++|.++ .+ ..+..+++|+.+++++|+++ .+... ...+.+++.+.+++|.+... ..+..+..+..+++..|
T Consensus 144 ~L~l~~N~i~-~~-~~~~~l~~L~~l~l~~n~i~-~ie~~~~~~~~~l~~l~l~~n~i~~i--~~~~~~~~l~~~~l~~n 218 (414)
T KOG0531|consen 144 ELNLSGNLIS-DI-SGLESLKSLKLLDLSYNRIV-DIENDELSELISLEELDLGGNSIREI--EGLDLLKKLVLLSLLDN 218 (414)
T ss_pred hheeccCcch-hc-cCCccchhhhcccCCcchhh-hhhhhhhhhccchHHHhccCCchhcc--cchHHHHHHHHhhcccc
Confidence 7888999886 33 34455888888899998888 45543 57788888888888887642 23333333333344444
Q ss_pred cc
Q 042634 177 NF 178 (427)
Q Consensus 177 ~l 178 (427)
.+
T Consensus 219 ~i 220 (414)
T KOG0531|consen 219 KI 220 (414)
T ss_pred cc
Confidence 44
No 480
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=98.65 E-value=2.7e-08 Score=97.92 Aligned_cols=77 Identities=23% Similarity=0.333 Sum_probs=60.5
Q ss_pred ccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHH-HHHHHhhcCCCCeeeccccCCceeeCCCCceEecccc
Q 042634 201 SEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVAS-ALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFG 279 (427)
Q Consensus 201 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~-~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG 279 (427)
..++||||++|++|.++..... ... ....++.+++. .+..+| ..|++|+|+||.||+++.++.++++|||
T Consensus 232 ~~vLvmE~i~G~~L~~~~~~~~---~~~---~~~~ia~~~~~~~l~ql~---~~g~~H~D~hPgNilv~~~g~i~liDfG 302 (437)
T TIGR01982 232 ERVLTMEWIDGIPLSDIAALDE---AGL---DRKALAENLARSFLNQVL---RDGFFHADLHPGNIFVLKDGKIIALDFG 302 (437)
T ss_pred CceEEEEeECCcccccHHHHHh---cCC---CHHHHHHHHHHHHHHHHH---hCCceeCCCCcccEEECCCCcEEEEeCC
Confidence 4689999999999988754221 111 23456666665 467888 8999999999999999999999999999
Q ss_pred cccccCC
Q 042634 280 LAKFLPE 286 (427)
Q Consensus 280 ~a~~~~~ 286 (427)
++..+..
T Consensus 303 ~~~~l~~ 309 (437)
T TIGR01982 303 IVGRLSE 309 (437)
T ss_pred CeeECCH
Confidence 9987654
No 481
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.63 E-value=6.5e-10 Score=109.59 Aligned_cols=125 Identities=30% Similarity=0.375 Sum_probs=94.5
Q ss_pred CCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccCcccCCC-Cccccccccceee
Q 042634 22 KLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNLTGTTPT-EVIGLSSLSIYLD 100 (427)
Q Consensus 22 ~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~-~~~~l~~l~~~L~ 100 (427)
.|...+.++|.+. .+..++.-++.|+.||||+|+++ .+. .+-.|+.|++|||++|.+. .+|. ...++. | ..|.
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~-~v~-~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L-~~L~ 238 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFT-KVD-NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-L-QLLN 238 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhh-hhH-HHHhcccccccccccchhc-cccccchhhhh-h-eeee
Confidence 5777888888887 78888888888899999999888 554 7778888889999999888 5554 233333 5 5688
Q ss_pred ccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCC-ccccccccccceeeeeeec
Q 042634 101 LSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIP-SSIGSCIRLEQLVMNGNFF 154 (427)
Q Consensus 101 l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p-~~~~~~~~l~~l~l~~n~l 154 (427)
+.||.++ ++ ..+-+|++|+.||++.|.+.+.-- ..++.+.+|+.|+|.+|.+
T Consensus 239 lrnN~l~-tL-~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl 291 (1096)
T KOG1859|consen 239 LRNNALT-TL-RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPL 291 (1096)
T ss_pred ecccHHH-hh-hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcc
Confidence 8888886 33 456788889999999988875211 2456778888888888876
No 482
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.61 E-value=3e-09 Score=84.03 Aligned_cols=107 Identities=20% Similarity=0.277 Sum_probs=87.7
Q ss_pred eeecCCcccccCCccccC-CCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 2 FTLVGNQFTGRIPGSIGD-LHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~-l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
.+|++|.|. .+|+.|.. .+.++.|+|++|.++ .+|.++..++.|+.|++++|.+. ..|..+..+.+|.+||.-+|.
T Consensus 58 i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na 134 (177)
T KOG4579|consen 58 ISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDSPENA 134 (177)
T ss_pred Eecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcCCCCc
Confidence 589999999 56766555 569999999999998 89999999999999999999999 999999999999999999999
Q ss_pred CcccCCCCccccccccceeeccCCcCcCCCCCC
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSN 113 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~ 113 (427)
.. .+|..+....+. ...++.++.+.+.-+..
T Consensus 135 ~~-eid~dl~~s~~~-al~~lgnepl~~~~~~k 165 (177)
T KOG4579|consen 135 RA-EIDVDLFYSSLP-ALIKLGNEPLGDETKKK 165 (177)
T ss_pred cc-cCcHHHhccccH-HHHHhcCCcccccCccc
Confidence 98 777554433333 34667777777654444
No 483
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.57 E-value=7.5e-09 Score=96.72 Aligned_cols=153 Identities=25% Similarity=0.252 Sum_probs=114.5
Q ss_pred eeecCCcccccCC--ccccCCCCCCEeeeecccceeecCcc-hhccccCCEeeeccccCcc-cCCcCccCCCCCCeEEcc
Q 042634 2 FTLVGNQFTGRIP--GSIGDLHKLQRLTLEMNKFWGEIPSS-IGNLTLLITLNFAENMLEG-SIPSSLGKCQNLILLDLS 77 (427)
Q Consensus 2 l~l~~n~l~~~~p--~~~~~l~~L~~L~l~~n~~~~~~p~~-~~~l~~L~~L~l~~n~l~~-~~p~~~~~l~~L~~l~l~ 77 (427)
||||+|=|+-..| .-+..|++|+.|+||.|++.-..... -..+++|+.|.|+.|.|+- .+-.-+..+++|..|+|.
T Consensus 151 LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~ 230 (505)
T KOG3207|consen 151 LDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLE 230 (505)
T ss_pred ecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhh
Confidence 7899998876555 44677999999999999997433332 2457899999999999984 233345567899999999
Q ss_pred CccCcccCCCCccccccccceeeccCCcCcCCCC--CCCcCCCCCCeEECcCCccccc-CCcc-----ccccccccceee
Q 042634 78 NNNLTGTTPTEVIGLSSLSIYLDLSQNQLNGPLP--SNFGILKNLGAIDISENKLSGQ-IPSS-----IGSCIRLEQLVM 149 (427)
Q Consensus 78 ~N~~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p--~~~~~l~~L~~l~l~~n~~~~~-~p~~-----~~~~~~l~~l~l 149 (427)
+|.....-......+..| ++|+|++|++- .++ .-.+.++.|..|.++.+.++.. +|+. ....++|+.|++
T Consensus 231 ~N~~~~~~~~~~~i~~~L-~~LdLs~N~li-~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i 308 (505)
T KOG3207|consen 231 ANEIILIKATSTKILQTL-QELDLSNNNLI-DFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNI 308 (505)
T ss_pred cccccceecchhhhhhHH-hhccccCCccc-ccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeec
Confidence 996433333334456677 67999999986 555 5678899999999999988731 2332 235689999999
Q ss_pred eeeeccc
Q 042634 150 NGNFFRG 156 (427)
Q Consensus 150 ~~n~l~~ 156 (427)
+.|++..
T Consensus 309 ~~N~I~~ 315 (505)
T KOG3207|consen 309 SENNIRD 315 (505)
T ss_pred ccCcccc
Confidence 9999963
No 484
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=98.50 E-value=1.9e-07 Score=79.79 Aligned_cols=66 Identities=29% Similarity=0.338 Sum_probs=52.5
Q ss_pred cceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCC-----eeeccccCCceeeCCCCceEec
Q 042634 202 EALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETP-----IVHCDLKPSNVLLDGELTAHVG 276 (427)
Q Consensus 202 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~-----ivHrDlkp~NIll~~~~~~kL~ 276 (427)
.++||||+++.++.+.- . .....+.+++++++.|| ..+ ++|+|++|.||+++ ++.++++
T Consensus 66 ~~lv~e~i~G~~l~~~~---------~---~~~~~~~~l~~~l~~LH---~~~~~~~~~~HgD~~~~Nil~~-~~~~~li 129 (170)
T cd05151 66 GVLITEFIEGSELLTED---------F---SDPENLEKIAKLLKKLH---SSPLPDLVPCHNDLLPGNFLLD-DGRLWLI 129 (170)
T ss_pred CeEEEEecCCCcccccc---------c---cCHHHHHHHHHHHHHHh---CCCCCCceeecCCCCcCcEEEE-CCeEEEE
Confidence 47999999998876531 0 11235678999999999 565 59999999999999 6689999
Q ss_pred ccccccc
Q 042634 277 DFGLAKF 283 (427)
Q Consensus 277 DFG~a~~ 283 (427)
|||.+..
T Consensus 130 Df~~a~~ 136 (170)
T cd05151 130 DWEYAGM 136 (170)
T ss_pred ecccccC
Confidence 9998753
No 485
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.45 E-value=1.9e-07 Score=85.46 Aligned_cols=78 Identities=21% Similarity=0.175 Sum_probs=63.5
Q ss_pred ccceeeeeecCC-CcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccccCCceeeCC-------CCc
Q 042634 201 SEALVYEFMVNG-SLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDG-------ELT 272 (427)
Q Consensus 201 ~~~lv~e~~~~g-~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~-------~~~ 272 (427)
..++|+|++++. +|.+++..... ...+...+..++.+++..+.-|| ..||+|+|++++|||++. +..
T Consensus 109 ~s~LVte~l~~~~sL~~~~~~~~~--~~~~~~~~~~ll~~la~~i~~LH---~~Gi~HgDL~~~NiLl~~~~~~~~~~~~ 183 (268)
T PRK15123 109 TSFIITEDLAPTISLEDYCADWAT--NPPDPRLKRMLIKRVATMVRDMH---AAGINHRDCYICHFLLHLPFPGREEDLK 183 (268)
T ss_pred eeEEEEeeCCCCccHHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHH---HCcCccCCCChhhEEEeccccCCCCCce
Confidence 468999999775 78888753211 23456677899999999999999 999999999999999975 468
Q ss_pred eEecccccccc
Q 042634 273 AHVGDFGLAKF 283 (427)
Q Consensus 273 ~kL~DFG~a~~ 283 (427)
+.++||+.++.
T Consensus 184 ~~LIDl~r~~~ 194 (268)
T PRK15123 184 LSVIDLHRAQI 194 (268)
T ss_pred EEEEECCcccc
Confidence 99999998854
No 486
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.45 E-value=2.6e-07 Score=77.60 Aligned_cols=69 Identities=33% Similarity=0.512 Sum_probs=57.0
Q ss_pred CccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccccCCceeeCCCCceEecccc
Q 042634 200 DSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFG 279 (427)
Q Consensus 200 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG 279 (427)
....|+|||.+|..|.+.+... ...++..+-.-+.-|| ..||+|+|+.++||++.++. +-++|||
T Consensus 72 ~~~~I~me~I~G~~lkd~l~~~-----------~~~~~r~vG~~vg~lH---~~givHGDLTtsNiIl~~~~-i~~IDfG 136 (204)
T COG3642 72 DNGLIVMEYIEGELLKDALEEA-----------RPDLLREVGRLVGKLH---KAGIVHGDLTTSNIILSGGR-IYFIDFG 136 (204)
T ss_pred CCCEEEEEEeCChhHHHHHHhc-----------chHHHHHHHHHHHHHH---hcCeecCCCccceEEEeCCc-EEEEECC
Confidence 4457999999888887777543 2446777778888899 99999999999999998765 8999999
Q ss_pred cccc
Q 042634 280 LAKF 283 (427)
Q Consensus 280 ~a~~ 283 (427)
++..
T Consensus 137 Lg~~ 140 (204)
T COG3642 137 LGEF 140 (204)
T ss_pred cccc
Confidence 9974
No 487
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.43 E-value=1.4e-07 Score=60.51 Aligned_cols=36 Identities=33% Similarity=0.533 Sum_probs=18.9
Q ss_pred CCCEeeeecccceeecCcchhccccCCEeeeccccCc
Q 042634 22 KLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLE 58 (427)
Q Consensus 22 ~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~ 58 (427)
+|++|+|++|+|+ .+|+.+++|++|+.|++++|.++
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 4555555555555 45555555555555555555555
No 488
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.40 E-value=8.3e-08 Score=101.29 Aligned_cols=102 Identities=30% Similarity=0.445 Sum_probs=50.3
Q ss_pred CCCEeeeeccc--ceeecCc-chhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccCcccCCCCccccccccce
Q 042634 22 KLQRLTLEMNK--FWGEIPS-SIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNLTGTTPTEVIGLSSLSIY 98 (427)
Q Consensus 22 ~L~~L~l~~n~--~~~~~p~-~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~~l~~l~~~ 98 (427)
.|+.|-+..|. +. .++. .|..++.|.+||||+|.=-+.+|..++++-+|++|++++..++ .+|..+.++..| .+
T Consensus 546 ~L~tLll~~n~~~l~-~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L-~~ 622 (889)
T KOG4658|consen 546 KLRTLLLQRNSDWLL-EISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKL-IY 622 (889)
T ss_pred ccceEEEeecchhhh-hcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhh-he
Confidence 45555555553 22 2222 2444555555555554444455555555555555555555554 555555555555 34
Q ss_pred eeccCCcCcCCCCCCCcCCCCCCeEECc
Q 042634 99 LDLSQNQLNGPLPSNFGILKNLGAIDIS 126 (427)
Q Consensus 99 L~l~~n~~~~~~p~~~~~l~~L~~l~l~ 126 (427)
|++..+.....+|.....|++|++|.+.
T Consensus 623 Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~ 650 (889)
T KOG4658|consen 623 LNLEVTGRLESIPGILLELQSLRVLRLP 650 (889)
T ss_pred eccccccccccccchhhhcccccEEEee
Confidence 5555544433444444445555555443
No 489
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=98.39 E-value=2.1e-07 Score=92.98 Aligned_cols=78 Identities=19% Similarity=0.226 Sum_probs=54.5
Q ss_pred CccceeeeeecCCCcccc--cccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccccCCceeeCCCC----ce
Q 042634 200 DSEALVYEFMVNGSLEEW--LHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGEL----TA 273 (427)
Q Consensus 200 ~~~~lv~e~~~~g~L~~~--l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~----~~ 273 (427)
...++||||+.|+.+.++ +.......+.+....+..++.|+ + ..|++|+|+||.||+++.++ ++
T Consensus 234 t~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi-------f---~~GffHaDpHPGNIlv~~~g~~~~~i 303 (537)
T PRK04750 234 SETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV-------F---RDGFFHADMHPGNIFVSYDPPENPRY 303 (537)
T ss_pred CCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-------H---hCCeeeCCCChHHeEEecCCCCCCeE
Confidence 356899999999999764 22211101123333333444443 3 57999999999999999887 99
Q ss_pred EecccccccccCCc
Q 042634 274 HVGDFGLAKFLPEA 287 (427)
Q Consensus 274 kL~DFG~a~~~~~~ 287 (427)
+++|||++..+...
T Consensus 304 ~llDFGivg~l~~~ 317 (537)
T PRK04750 304 IALDFGIVGSLNKE 317 (537)
T ss_pred EEEecceEEECCHH
Confidence 99999999877553
No 490
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.39 E-value=5e-09 Score=103.47 Aligned_cols=121 Identities=31% Similarity=0.361 Sum_probs=85.0
Q ss_pred eecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcC-ccCCCCCCeEEccCccC
Q 042634 3 TLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSS-LGKCQNLILLDLSNNNL 81 (427)
Q Consensus 3 ~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~-~~~l~~L~~l~l~~N~~ 81 (427)
+.+.|.|+ .+...+.-++.|+.|+|++|+++ .+ ..+-.|+.|+.|||+.|++. .+|.- ...+. |+.|.++||.+
T Consensus 170 ~fsyN~L~-~mD~SLqll~ale~LnLshNk~~-~v-~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~lrnN~l 244 (1096)
T KOG1859|consen 170 SFSYNRLV-LMDESLQLLPALESLNLSHNKFT-KV-DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNLRNNAL 244 (1096)
T ss_pred hcchhhHH-hHHHHHHHHHHhhhhccchhhhh-hh-HHHHhcccccccccccchhc-cccccchhhhh-heeeeecccHH
Confidence 55677777 66777788888888888888887 34 36778888888888888888 77743 33344 88888888888
Q ss_pred cccCCCCccccccccceeeccCCcCcC-CCCCCCcCCCCCCeEECcCCccc
Q 042634 82 TGTTPTEVIGLSSLSIYLDLSQNQLNG-PLPSNFGILKNLGAIDISENKLS 131 (427)
Q Consensus 82 ~~~~p~~~~~l~~l~~~L~l~~n~~~~-~~p~~~~~l~~L~~l~l~~n~~~ 131 (427)
+... ++.++.+| ..|||++|-+.+ +--..++.|..|+.|+|.+|.+-
T Consensus 245 ~tL~--gie~LksL-~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 245 TTLR--GIENLKSL-YGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred Hhhh--hHHhhhhh-hccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 7333 45667777 568888888764 11133455667778888888765
No 491
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.32 E-value=2.9e-07 Score=58.96 Aligned_cols=37 Identities=32% Similarity=0.507 Sum_probs=32.4
Q ss_pred ccCCEeeeccccCcccCCcCccCCCCCCeEEccCccCc
Q 042634 45 TLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNLT 82 (427)
Q Consensus 45 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~~ 82 (427)
++|++|++++|+++ .+|+.++.|++|++|++++|+++
T Consensus 1 ~~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 1 KNLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp TT-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred CcceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 57899999999999 88988999999999999999998
No 492
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.31 E-value=8.6e-07 Score=76.55 Aligned_cols=75 Identities=25% Similarity=0.313 Sum_probs=50.5
Q ss_pred ccceeeeeec--CCCcccccccchhhhhccCHHHHHHHHHHHHHHHHH-HhhcCCCCeeeccccCCceeeCCCCceEecc
Q 042634 201 SEALVYEFMV--NGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDY-LHHYCETPIVHCDLKPSNVLLDGELTAHVGD 277 (427)
Q Consensus 201 ~~~lv~e~~~--~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~-LH~~~~~~ivHrDlkp~NIll~~~~~~kL~D 277 (427)
..++||||++ |..+.. +.... ++......++.+++..+.. +| ..||+|+|+.+.||+++++ .+.|+|
T Consensus 80 ~~~ivME~I~~~G~~~~~-l~~~~-----~~~~~~~~~~~~il~~~~~~~~---~~givHGDLs~~NIlv~~~-~~~iID 149 (188)
T PF01163_consen 80 RNVIVMEYIGEDGVPLPR-LKDVD-----LSPEEPKELLEEILEEIIKMLH---KAGIVHGDLSEYNILVDDG-KVYIID 149 (188)
T ss_dssp TTEEEEE--EETTEEGGC-HHHCG-----GGGSTHHHHHHHHHHHHHHHHH---CTTEEESS-STTSEEEETT-CEEE--
T ss_pred CCEEEEEecCCCccchhh-HHhcc-----ccchhHHHHHHHHHHHHHHHHH---hcCceecCCChhhEEeecc-eEEEEe
Confidence 3479999997 444433 32211 2234566788888886665 57 8999999999999999887 899999
Q ss_pred cccccccC
Q 042634 278 FGLAKFLP 285 (427)
Q Consensus 278 FG~a~~~~ 285 (427)
||.|....
T Consensus 150 f~qav~~~ 157 (188)
T PF01163_consen 150 FGQAVDSS 157 (188)
T ss_dssp GTTEEETT
T ss_pred cCcceecC
Confidence 99887654
No 493
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.31 E-value=6.7e-07 Score=79.05 Aligned_cols=77 Identities=27% Similarity=0.349 Sum_probs=64.8
Q ss_pred ccceeeeeecC-CCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccccCCceeeCCCC---ceEec
Q 042634 201 SEALVYEFMVN-GSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGEL---TAHVG 276 (427)
Q Consensus 201 ~~~lv~e~~~~-g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~---~~kL~ 276 (427)
..++|+|++++ .+|.+++.... ..+......++.+++..+.-|| ..||+|+|+++.|||++.+. .+.++
T Consensus 91 ~s~lite~l~~~~~L~~~~~~~~----~~~~~~~~~ll~~l~~~i~~lH---~~gi~H~Dl~~~NILv~~~~~~~~~~lI 163 (206)
T PF06293_consen 91 RSYLITEALPGAQDLRDLLQQWE----QLDPSQRRELLRALARLIAKLH---DAGIYHGDLNPSNILVDPDDGQYRFYLI 163 (206)
T ss_pred eEEEEEEeCCCcccHHHHHHhhc----ccchhhHHHHHHHHHHHHHHHH---HCcCCCCCCCcccEEEeCCCCceeEEEE
Confidence 45899999987 47888886532 1556678899999999999999 99999999999999998876 89999
Q ss_pred cccccccc
Q 042634 277 DFGLAKFL 284 (427)
Q Consensus 277 DFG~a~~~ 284 (427)
||+-++..
T Consensus 164 Dld~~~~~ 171 (206)
T PF06293_consen 164 DLDRMRFR 171 (206)
T ss_pred cchhceeC
Confidence 99988754
No 494
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.26 E-value=1e-06 Score=73.87 Aligned_cols=80 Identities=24% Similarity=0.373 Sum_probs=59.9
Q ss_pred CCccceeeeeecC-CCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccccCCceeeCCCC---ceE
Q 042634 199 NDSEALVYEFMVN-GSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGEL---TAH 274 (427)
Q Consensus 199 ~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~---~~k 274 (427)
...-.++|||.++ .++.+++...-. ..........+++.|-+.+.-|| ..+|+|+||..+||++..++ .+-
T Consensus 82 ~~~~~i~ME~~~g~~~vk~~i~~~~~--~~~~d~~~~~~~~~iG~~igklH---~ndiiHGDLTTSNill~~~~~~~~~~ 156 (229)
T KOG3087|consen 82 TYGGQIYMEFIDGASTVKDFILSTME--DESEDEGLAELARRIGELIGKLH---DNDIIHGDLTTSNILLRSDGNQITPI 156 (229)
T ss_pred cCCCeEEEEeccchhHHHHHHHHHcc--CcccchhHHHHHHHHHHHHHHhh---hCCeecccccccceEEecCCCcCceE
Confidence 3455899999966 367777654321 12223333788999999999999 99999999999999996544 568
Q ss_pred ecccccccc
Q 042634 275 VGDFGLAKF 283 (427)
Q Consensus 275 L~DFG~a~~ 283 (427)
++|||++..
T Consensus 157 lIdfgls~~ 165 (229)
T KOG3087|consen 157 LIDFGLSSV 165 (229)
T ss_pred EEeecchhc
Confidence 999999865
No 495
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.25 E-value=3.3e-08 Score=90.03 Aligned_cols=161 Identities=20% Similarity=0.207 Sum_probs=80.0
Q ss_pred ccCCCCCCEeeeecccceeecCc----chhccccCCEeeeccccCccc-------------CCcCccCCCCCCeEEccCc
Q 042634 17 IGDLHKLQRLTLEMNKFWGEIPS----SIGNLTLLITLNFAENMLEGS-------------IPSSLGKCQNLILLDLSNN 79 (427)
Q Consensus 17 ~~~l~~L~~L~l~~n~~~~~~p~----~~~~l~~L~~L~l~~n~l~~~-------------~p~~~~~l~~L~~l~l~~N 79 (427)
+...+.|++||||.|.|.-.-++ -+.+++.|+.|+|.||-+... .-.-+++-++|+++..++|
T Consensus 88 L~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rN 167 (382)
T KOG1909|consen 88 LLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRN 167 (382)
T ss_pred HhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeecc
Confidence 34445666666666666532222 234456666666666666511 1112333445666666666
Q ss_pred cCcccCCC----CccccccccceeeccCCcCcC----CCCCCCcCCCCCCeEECcCCccccc----CCccccccccccce
Q 042634 80 NLTGTTPT----EVIGLSSLSIYLDLSQNQLNG----PLPSNFGILKNLGAIDISENKLSGQ----IPSSIGSCIRLEQL 147 (427)
Q Consensus 80 ~~~~~~p~----~~~~l~~l~~~L~l~~n~~~~----~~p~~~~~l~~L~~l~l~~n~~~~~----~p~~~~~~~~l~~l 147 (427)
++...... .+...++| ..+.++.|.+.- .+-..+..++.|+.|||..|-|+.. +...+..+++|+.|
T Consensus 168 rlen~ga~~~A~~~~~~~~l-eevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El 246 (382)
T KOG1909|consen 168 RLENGGATALAEAFQSHPTL-EEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLREL 246 (382)
T ss_pred ccccccHHHHHHHHHhcccc-ceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheee
Confidence 66522221 23344455 456666666531 0112345566666666666655522 22234455566666
Q ss_pred eeeeeeccccCCCCc-----ccccCCceeeccCCcc
Q 042634 148 VMNGNFFRGNIPSSL-----SSLRGIENLDLSRNNF 178 (427)
Q Consensus 148 ~l~~n~l~~~~p~~l-----~~l~~L~~L~L~~N~l 178 (427)
+++.+.+......++ ...++|+.+.+.+|.+
T Consensus 247 ~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeI 282 (382)
T KOG1909|consen 247 NLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEI 282 (382)
T ss_pred cccccccccccHHHHHHHHhccCCCCceeccCcchh
Confidence 666665544332222 1234455555555544
No 496
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=98.18 E-value=2.3e-06 Score=72.48 Aligned_cols=121 Identities=21% Similarity=0.259 Sum_probs=65.8
Q ss_pred eeecCCcccccCCccccC-CCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccC-CCCCCeEEccCc
Q 042634 2 FTLVGNQFTGRIPGSIGD-LHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGK-CQNLILLDLSNN 79 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~-l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~-l~~L~~l~l~~N 79 (427)
+||++.++. .+-. ++. +.+...+||+.|.+. .++ .|..++.|..|.|++|+++ .+-+.+.. +++|+.|.+++|
T Consensus 24 ~~LR~lkip-~ien-lg~~~d~~d~iDLtdNdl~-~l~-~lp~l~rL~tLll~nNrIt-~I~p~L~~~~p~l~~L~LtnN 98 (233)
T KOG1644|consen 24 LDLRGLKIP-VIEN-LGATLDQFDAIDLTDNDLR-KLD-NLPHLPRLHTLLLNNNRIT-RIDPDLDTFLPNLKTLILTNN 98 (233)
T ss_pred ccccccccc-chhh-ccccccccceecccccchh-hcc-cCCCccccceEEecCCcce-eeccchhhhccccceEEecCc
Confidence 455555554 2222 333 235666777777765 443 3666777777777777777 55555544 355677777777
Q ss_pred cCcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCc----cccccccccceeeeee
Q 042634 80 NLTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPS----SIGSCIRLEQLVMNGN 152 (427)
Q Consensus 80 ~~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~----~~~~~~~l~~l~l~~n 152 (427)
.+. .+- .+ .-+..|++|+.|.+-+|..+ .-+. .+..+++|+.||+++=
T Consensus 99 si~-~l~----dl-------------------~pLa~~p~L~~Ltll~Npv~-~k~~YR~yvl~klp~l~~LDF~kV 150 (233)
T KOG1644|consen 99 SIQ-ELG----DL-------------------DPLASCPKLEYLTLLGNPVE-HKKNYRLYVLYKLPSLRTLDFQKV 150 (233)
T ss_pred chh-hhh----hc-------------------chhccCCccceeeecCCchh-cccCceeEEEEecCcceEeehhhh
Confidence 665 221 11 11233555566655555554 2222 3456666777666654
No 497
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.15 E-value=1.2e-06 Score=92.69 Aligned_cols=132 Identities=28% Similarity=0.316 Sum_probs=110.9
Q ss_pred ccCCCCCCEeeeecccceeecCcchhccccCCEeeecccc--CcccCCcC-ccCCCCCCeEEccCccCcccCCCCccccc
Q 042634 17 IGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENM--LEGSIPSS-LGKCQNLILLDLSNNNLTGTTPTEVIGLS 93 (427)
Q Consensus 17 ~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~--l~~~~p~~-~~~l~~L~~l~l~~N~~~~~~p~~~~~l~ 93 (427)
..+....+.+.+.+|.+. .++... ..+.|++|-+..|. +. .++.. |..++.|++||||+|.--+.+|..++++.
T Consensus 519 ~~~~~~~rr~s~~~~~~~-~~~~~~-~~~~L~tLll~~n~~~l~-~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li 595 (889)
T KOG4658|consen 519 VKSWNSVRRMSLMNNKIE-HIAGSS-ENPKLRTLLLQRNSDWLL-EISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELV 595 (889)
T ss_pred ccchhheeEEEEeccchh-hccCCC-CCCccceEEEeecchhhh-hcCHHHHhhCcceEEEECCCCCccCcCChHHhhhh
Confidence 345578899999999987 566544 34479999999997 55 66655 66699999999999988889999999999
Q ss_pred cccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeee
Q 042634 94 SLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNF 153 (427)
Q Consensus 94 ~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~ 153 (427)
+| ++|++++..++ .+|..+.+|+.|.+|++..+.-...+|..+..+.+|+.|.+-...
T Consensus 596 ~L-ryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 596 HL-RYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred hh-hcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 99 69999999998 899999999999999999987665677777889999999887765
No 498
>PRK15386 type III secretion protein GogB; Provisional
Probab=98.14 E-value=4.5e-06 Score=79.70 Aligned_cols=117 Identities=15% Similarity=0.273 Sum_probs=59.1
Q ss_pred cCCCCCCEeeeecccceeecCcchhccccCCEeeecc-ccCcccCCcCccCCCCCCeEEccCc-cCcccCCCCccccccc
Q 042634 18 GDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAE-NMLEGSIPSSLGKCQNLILLDLSNN-NLTGTTPTEVIGLSSL 95 (427)
Q Consensus 18 ~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~-n~l~~~~p~~~~~l~~L~~l~l~~N-~~~~~~p~~~~~l~~l 95 (427)
..+.+++.|++++|.++ .+|. + -.+|+.|.+++ +.++ .+|..+. ++|++|++++| .+. .+|.. |
T Consensus 49 ~~~~~l~~L~Is~c~L~-sLP~-L--P~sLtsL~Lsnc~nLt-sLP~~LP--~nLe~L~Ls~Cs~L~-sLP~s------L 114 (426)
T PRK15386 49 EEARASGRLYIKDCDIE-SLPV-L--PNELTEITIENCNNLT-TLPGSIP--EGLEKLTVCHCPEIS-GLPES------V 114 (426)
T ss_pred HHhcCCCEEEeCCCCCc-ccCC-C--CCCCcEEEccCCCCcc-cCCchhh--hhhhheEccCccccc-ccccc------c
Confidence 34566677777766666 5652 1 23466666665 4444 5554432 45667777666 333 44433 2
Q ss_pred cceeeccCCcCc--CCCCCCCcCC------------------CCCCeEECcCCcccccCCccccccccccceeeeee
Q 042634 96 SIYLDLSQNQLN--GPLPSNFGIL------------------KNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGN 152 (427)
Q Consensus 96 ~~~L~l~~n~~~--~~~p~~~~~l------------------~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n 152 (427)
..|++..|... +.+|..+..| ++|+.|++++|... .+|..+- .+|+.|.++.|
T Consensus 115 -e~L~L~~n~~~~L~~LPssLk~L~I~~~n~~~~~~lp~~LPsSLk~L~Is~c~~i-~LP~~LP--~SLk~L~ls~n 187 (426)
T PRK15386 115 -RSLEIKGSATDSIKNVPNGLTSLSINSYNPENQARIDNLISPSLKTLSLTGCSNI-ILPEKLP--ESLQSITLHIE 187 (426)
T ss_pred -ceEEeCCCCCcccccCcchHhheeccccccccccccccccCCcccEEEecCCCcc-cCccccc--ccCcEEEeccc
Confidence 23444443321 2344332222 35666666666544 3343333 35666666555
No 499
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.12 E-value=3.9e-07 Score=83.19 Aligned_cols=186 Identities=22% Similarity=0.326 Sum_probs=131.4
Q ss_pred CeeecCCcccc----cCCccccCCCCCCEeeeecccceee----cCc-------chhccccCCEeeeccccCcccCCcC-
Q 042634 1 AFTLVGNQFTG----RIPGSIGDLHKLQRLTLEMNKFWGE----IPS-------SIGNLTLLITLNFAENMLEGSIPSS- 64 (427)
Q Consensus 1 ~l~l~~n~l~~----~~p~~~~~l~~L~~L~l~~n~~~~~----~p~-------~~~~l~~L~~L~l~~n~l~~~~p~~- 64 (427)
.++||||.|.. .+...+...++|+..++|. -++|. +|+ .+-++++|++||||.|-|....++.
T Consensus 34 ~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd-~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g~~~l 112 (382)
T KOG1909|consen 34 KLDLSGNTFGTEAARAIAKVLASKKELREVNLSD-MFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKGIRGL 112 (382)
T ss_pred EEeccCCchhHHHHHHHHHHHhhcccceeeehHh-hhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccchHHH
Confidence 37999999953 3445677888999999984 56654 344 3345679999999999999766654
Q ss_pred ---ccCCCCCCeEEccCccCcccCCC--------------CccccccccceeeccCCcCcC----CCCCCCcCCCCCCeE
Q 042634 65 ---LGKCQNLILLDLSNNNLTGTTPT--------------EVIGLSSLSIYLDLSQNQLNG----PLPSNFGILKNLGAI 123 (427)
Q Consensus 65 ---~~~l~~L~~l~l~~N~~~~~~p~--------------~~~~l~~l~~~L~l~~n~~~~----~~p~~~~~l~~L~~l 123 (427)
+.++++|++|.|.||-+. .... ....-+.| +.+..+.|++.. .+...+...+.|+.+
T Consensus 113 ~~ll~s~~~L~eL~L~N~Glg-~~ag~~l~~al~~l~~~kk~~~~~~L-rv~i~~rNrlen~ga~~~A~~~~~~~~leev 190 (382)
T KOG1909|consen 113 EELLSSCTDLEELYLNNCGLG-PEAGGRLGRALFELAVNKKAASKPKL-RVFICGRNRLENGGATALAEAFQSHPTLEEV 190 (382)
T ss_pred HHHHHhccCHHHHhhhcCCCC-hhHHHHHHHHHHHHHHHhccCCCcce-EEEEeeccccccccHHHHHHHHHhccccceE
Confidence 455788999999999885 2211 12233456 568889999852 112346777899999
Q ss_pred ECcCCccccc----CCccccccccccceeeeeeecccc----CCCCcccccCCceeeccCCcccccccchhhhcc
Q 042634 124 DISENKLSGQ----IPSSIGSCIRLEQLVMNGNFFRGN----IPSSLSSLRGIENLDLSRNNFIRHRNLVKIITS 190 (427)
Q Consensus 124 ~l~~n~~~~~----~p~~~~~~~~l~~l~l~~n~l~~~----~p~~l~~l~~L~~L~L~~N~ll~Hpniv~~~~~ 190 (427)
.++.|.+... +...+..|++|+.|+++.|.|+.. +...+..++.|+.++++.+.+. ....+.+...
T Consensus 191 r~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~-~~Ga~a~~~a 264 (382)
T KOG1909|consen 191 RLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLE-NEGAIAFVDA 264 (382)
T ss_pred EEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccc-cccHHHHHHH
Confidence 9999987621 123567899999999999999754 3455678889999998887653 3344444444
No 500
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.09 E-value=3.3e-05 Score=74.59 Aligned_cols=133 Identities=21% Similarity=0.273 Sum_probs=101.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecC-CCcccccccc-----------hhhhhccCHHHHHHHHHHHHHHHHH
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVN-GSLEEWLHPN-----------REALKNLNLLQRLSIAVDVASALDY 246 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~-g~L~~~l~~~-----------~~~~~~l~~~~~~~~~~~i~~~L~~ 246 (427)
+.|+|+|++-+++....|.+ ...++|++|.++ ++|.++.-.. .......++...+.++.|+..||.+
T Consensus 330 l~h~NvV~frevf~t~tF~D-~SlvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~s 408 (655)
T KOG3741|consen 330 LCHTNVVPFREVFLTYTFGD-LSLVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYS 408 (655)
T ss_pred hccCceeehhhhhhhhccCc-ceEEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHH
Confidence 56999999999887555543 467899999876 5776643211 1112347788999999999999999
Q ss_pred HhhcCCCCeeeccccCCceeeCCCCceEecccccccccCCcCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCC
Q 042634 247 LHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKR 326 (427)
Q Consensus 247 LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~ 326 (427)
+| +.|..-+-+.+.+|+++++.+++|+.-|....+..+.. |.+. --.+-|.=.||.++.-|.+|..
T Consensus 409 IH---ssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d~~--------~~le---~~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 409 IH---SSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQEDPT--------EPLE---SQQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred HH---hcCceeecccHhHeEeeCcceEEEecccceeeecCCCC--------cchh---HHhhhhHHHHHHHHHHHhhccc
Confidence 99 89999999999999999999999998888776654431 1111 1245688899999999999964
Done!